BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038112
         (625 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/684 (61%), Positives = 518/684 (75%), Gaps = 61/684 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S KR++ LLK+EKNPH+AL++FDS TR PGY+H+P++FHHIL+RL DPKLV HVSRI+E
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
           LI  QKC CPEDVAL+VI+AY KNSMPD+ALD+FQRM+EIFGC+ GI             
Sbjct: 68  LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                           CRK+QF+KAK  LN +WE+G  PDV+SY
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           GT+IN L K+G +  AL +FDEM ERGV  +V CYNILIDGFFKKGD + A EIWERL+ 
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
             SVYPN+ +YNVMINGLCKCG+FDE  E+W RMKKNER +D +TY + IHGLC +GN++
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
           GA RVY+EM E+G+  D V YN M++G+ RAG+I+EC ELW+VM ++GC  VVSYNILIR
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 367

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG---- 374
           GL EN KVDEAISIWELL EK+C ADS T+GVL++GLCKNGYLNKA+ IL E E G    
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 375 -------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EGRL + A ++++M KHGCK N + CN+++NGF++ASKLE+A+  F
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M  KGC PTVV+YNTLINGL K ERF EAY+ VKEML KGWKP+MITYSLL+NGLCQ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           KK+DMAL L CQ L+KGF PDV M+NI+IHGLCS+GKVEDALQLYS MK+R CVPNLVT+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTLM+G +K  D ++A +IW+HIL+   +PDIISYNITLKGLCSC R+SDA  FLNDA+ 
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667

Query: 602 RGILPTTITWHILVRAVMNNGAST 625
           RG+LPT ITW+ILVRAV++NGA T
Sbjct: 668 RGVLPTAITWNILVRAVLDNGALT 691


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/681 (62%), Positives = 514/681 (75%), Gaps = 61/681 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +SA++L  LLKAEK+P +ALALFDSA+R+PGY HSPH+F  ILRRL DPKLVVHV+RI+E
Sbjct: 8   LSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVE 67

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
           LI+ QKC C EDV L+V++AY K+ MP++ALD FQ+M EIFGC+ GI             
Sbjct: 68  LIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEA 127

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                            +KRQF +AK  L+ +W K LKPDVYSY
Sbjct: 128 NLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSY 187

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           GTVING+VKSGDL+ AL VFDEMFERG+  +V+CYNI+IDGFFK+GDY++ KEIWERLV 
Sbjct: 188 GTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK 247

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
            + VYPNVVTYNVMINGLCK GRFDE LEMW+RMKKNE E D FTY S I GLC  GNV+
Sbjct: 248 GSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVD 307

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
           GA  VY+EMV+  + VD VTYNA+++GFCRAGKIKE FELW +MG++ C NVVSYNI IR
Sbjct: 308 GAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIR 367

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
           GL EN KV+EAIS+WELLR +   ADSTT+GVLI+GLCKNG+LNKA++IL E ++GG   
Sbjct: 368 GLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL 427

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         +GR+ +A  +V++MDK+GC+L+ + CN L+NGF++ASKLE AI  F
Sbjct: 428 DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFF 487

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +EM  KGCSPTVVSYNTLINGLCK ERF +AYSFVKEMLEK WKPDMITYSLL++GLCQ 
Sbjct: 488 REMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQG 547

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           KKIDMAL L  Q L KG  PDVTM+NIL+HGLCSAGK+EDAL LYSNMK+ NC+PNLVT+
Sbjct: 548 KKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTH 607

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTLMDGL+K  +C+ A  IW  + +   +PDIISYNITLKGLCSC R+SD     +DAL 
Sbjct: 608 NTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALK 667

Query: 602 RGILPTTITWHILVRAVMNNG 622
            GILPT+ITW+ILVRAV+  G
Sbjct: 668 NGILPTSITWYILVRAVLKLG 688


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/674 (62%), Positives = 508/674 (75%), Gaps = 64/674 (9%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLI-DPKLVVHVSRILELIEIQKCYCP 72
           AEKNP +AL+LF+SA+R    +HS H+FHHILRRL  D +LV HVSRI+++++ QKC C 
Sbjct: 22  AEKNPLSALSLFESASRNK--SHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCK 79

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG------------------------ 108
           EDVAL+VI+AY KN M +KALD FQ M +IFGC+ G                        
Sbjct: 80  EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFS 139

Query: 109 --------------------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
                               I C+K+Q EKA   L+ +W + LKPDV+SYGT+ING+VK 
Sbjct: 140 RYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKV 199

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GDLLGAL VFDEM  RGV  +V CYN+LIDGFFK GDY + KEIWERLV + SVYPNVVT
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVT 259

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN+MINGLCKCGRFDE LE+W+RM KNEREKD FTY S IHGLC+AGN++GA RVY+E+V
Sbjct: 260 YNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV 319

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDE 328
           ES + VDAVT+NAM++GFCRAGKIKE FELW VMG++ C  VVSYNILI+GL ENGKV+E
Sbjct: 320 ESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEE 379

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           AISIWELL +K C  +STT+GVLI+GLCKNG LNKA++I  E E+G              
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVD 439

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EGR+ +A S+VN+MDK G KL+ + CN L+NGF++ASKLE+AI  F+EM  KGCSP
Sbjct: 440 GLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSP 499

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           T+VSYNTLI GLCK ERF EAYSFVKEMLEK WKPDMIT SLL++GLCQ KKI+MAL L 
Sbjct: 500 TIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLW 559

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            Q L KGF PD+TMYNIL+HGLCS  K+EDALQLYS+MK+  CVPNLVT NTLM+GL+K 
Sbjct: 560 QQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKV 619

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            D +KA EIW+ IL++ L PDIISYNIT+KGLCSCSR+SDA EFLNDAL RGILPT +TW
Sbjct: 620 RDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTW 679

Query: 612 HILVRAVMNNGAST 625
           +ILVRA +N   S+
Sbjct: 680 NILVRAAVNFRTSS 693


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/678 (58%), Positives = 491/678 (72%), Gaps = 86/678 (12%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S KR++ LLK+EKNPH+AL++FDS TR PGY+H+P++FHHIL+RL DPKLV H      
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH------ 61

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
                              AY KNSMPD+ALD+FQRM+EIFGC+ GI             
Sbjct: 62  -------------------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 102

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                           CRK+QF+KAK  LN +W +G  PDV+SY
Sbjct: 103 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSY 162

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           GT+IN L K+G +  AL +FDEM ERGV  +V CYNILIDGFFKKGD + A EIWERL+ 
Sbjct: 163 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 222

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
             SVYPN+ +YNVMINGLCKCG+FDE  E+W RMKKNER +D +TY + IHGLC +GN++
Sbjct: 223 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 282

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
           GA RVY+EM E+G+  D V YN M++G+ RAG+I+EC ELW+VM ++GC  VVSYNILIR
Sbjct: 283 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 342

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG---- 374
           GL EN KVDEAISIWELL EK+C ADS T+GVL++GLCKNGYLNKA+ IL E E G    
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402

Query: 375 -------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EGRL + A ++++M KHGCK N Y CN+++NGF++ASKLE+A+  F
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M  KGC PTVV+YNTLINGL K ERF EAY+ VKEML+KGWKP+MITYSLL+NGLCQ 
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           KK+DMAL L CQ L+KGF PDV M+NI+IHGLCS+GKVEDALQLYS MK+RNCVPNLVT+
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTLM+G +K  D ++A +IW+HIL+  L+PDIISYNITLKGLCSC R+SDA  FLNDA+ 
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 642

Query: 602 RGILPTTITWHILVRAVM 619
           RG+LPT ITW+ILV+  +
Sbjct: 643 RGVLPTAITWNILVQGYL 660



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 273/565 (48%), Gaps = 40/565 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           VI+       P  AL +F  +    G           +       + + ++   P + ++
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPG-----------YSHTPYVFHHILKRLFDPKLVAH 61

Query: 139 GTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
               N +        AL +F  M E  G +  +  YN L++   +   +  A+  +  L 
Sbjct: 62  AYAKNSMPDQ-----ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF--LY 114

Query: 198 MET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            ET  + PN+ TYN++I   C+  +FD+  E+ + M       D F+Y + I+ L K G 
Sbjct: 115 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGY 174

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYN 314
           +  A +++ EM E G+  D   YN +IDGF + G I    E+WE +  G     N+ SYN
Sbjct: 175 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 234

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ++I GL + GK DE+  IW  +++     D  T+  LI+GLC +G L+ A ++  E+ E 
Sbjct: 235 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 294

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR+ +   L   M+K GC+    + N L+ G  + +K++ A
Sbjct: 295 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEA 353

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           I +++ +  K C    ++Y  L++GLCK     +A S ++E        D   YS +ING
Sbjct: 354 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 413

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+  ++D    +  Q  + G  P+  + N +I+G   A K+EDAL+ + NM  + C P 
Sbjct: 414 LCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 473

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +VTYNTL++GL K     +A  +   +L++  +P++I+Y++ + GLC   ++  A     
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 533

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
            AL +G  P     +I++  + ++G
Sbjct: 534 QALEKGFKPDVKMHNIIIHGLCSSG 558



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 213/520 (40%), Gaps = 100/520 (19%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V S   L+N L        AL LFD    E G       ++ ++        +++ S I 
Sbjct: 159 VFSYGTLINSLAKNGYMSDALKLFDEMP-ERGVTPDVACYNILIDGFFKKGDILNASEIW 217

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCR 112
           E +       P   + +V I    K    D++ +++ RM       +++     I  LC 
Sbjct: 218 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 277

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
               + A R    + E G+ PDV  Y T++NG +++G +   L ++  M + G  T VV 
Sbjct: 278 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVS 336

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YNILI G F+      A  IWE L+ E     + +TY V+++GLCK G  ++ L + +  
Sbjct: 337 YNILIRGLFENAKVDEAISIWE-LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 395

Query: 233 KKNEREKDSFTYCSFIHGLCKAG-----------------------------------NV 257
           +    + D+F Y S I+GLC+ G                                    +
Sbjct: 396 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 455

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY--- 313
           E A R +  MV  G F   VTYN +I+G  +A +  E + L + M +KG   N+++Y   
Sbjct: 456 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLL 515

Query: 314 --------------------------------NILIRGLLENGKVDEAISIWELLREKNC 341
                                           NI+I GL  +GKV++A+ ++  ++++NC
Sbjct: 516 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNC 575

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------EG-----RLADAAS 384
             +  TH  L+ G  K     +A +I + + + G            +G     R++DA  
Sbjct: 576 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVG 635

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
            +N     G    A T N L+ G++        +F+   M
Sbjct: 636 FLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASM 675


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/625 (60%), Positives = 468/625 (74%), Gaps = 61/625 (9%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S KR++ LLK+EKNPH+AL++FDS TR PGY+H+P++FHHIL+RL DPKLV HVSRI+E
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
           LI  QKC CPEDVAL+VI+AY KNSMPD+ALD+FQRM+EIFGC+ GI             
Sbjct: 68  LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                           CRK+QF+KAK  LN +WE+G  PDV+SY
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           GT+IN L K+G +  AL +FDEM ERGV  +V CYNILIDGFFKKGD + A EIWERL+ 
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
             SVYPN+ +YNVMINGLCKCG+FDE  E+W RMKKNER +D +TY + IHGLC +GN++
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
           GA RVY+EM E+G+  D V YN M++G+ RAG+I+EC ELW+VM ++GC  VVSYNILIR
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 367

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG---- 374
           GL EN KVDEAISIWELL EK+C ADS T+GVL++GLCKNGYLNKA+ IL E E G    
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 375 -------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EGRL + A ++++M KHGCK N + CN+++NGF++ASKLE+A+  F
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M  KGC PTVV+YNTLINGL K ERF EAY+ VKEML KGWKP+MITYSLL+NGLCQ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           KK+DMAL L CQ L+KGF PDV M+NI+IHGLCS+GKVEDALQLYS MK+R CVPNLVT+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 542 NTLMDGLFKTGDCDKALEIWNHILE 566
           NTLM+G +K  D ++A +IW+HIL+
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 257/504 (50%), Gaps = 24/504 (4%)

Query: 140 TVINGLVKSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           TVI    K+     AL +F  M E  G +  +  YN L++   +   +  A+  +  L  
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF--LYF 140

Query: 199 ET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           ET  + PN+ TYN++I   C+  +FD+  E+ + M +     D F+Y + I+ L K G +
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYNI 315
             A +++ EM E G+  D   YN +IDGF + G I    E+WE +  G     N+ SYN+
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I GL + GK DE+  IW  +++     D  T+  LI+GLC +G L+ A ++  E+ E G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR+ +   L   M+K GC+    + N L+ G  + +K++ AI
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +++ +  K C    ++Y  L++GLCK     +A S ++E        D   YS +INGL
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  ++D    +  Q  + G  P+  + N +I+G   A K+EDAL+ + NM  + C P +
Sbjct: 440 CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTYNTL++GL K     +A  +   +L +  +P++I+Y++ + GLC   ++  A      
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
           AL +G  P     +I++  + ++G
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSG 583



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 1/159 (0%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R  + E A RF  ++  KG  P V +Y T+INGL K+     A A+  EM  +G + N++
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y++L++G  +      A  +W +  +E    P+V  +N++I+GLC  G+ ++ L+++  
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQ-ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           MK+ +   +  T+ + + G  K  + E A +++  +++S
Sbjct: 595 MKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ + A        EKG KPDV  +  +I+GL  SG +  AL ++ EM +R    N
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +V +N L++GF+K  D+ RA +IW+ ++   S
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQSWS 635


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/681 (56%), Positives = 493/681 (72%), Gaps = 61/681 (8%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VIS   +L LLKAEKNP+ ALA+FDSA + PGYAH P +FHHILRRL+DPKLVVHV RI+
Sbjct: 7   VISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIV 66

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL----------- 110
           +L+  Q+C C EDVALS I+AY K SMPD+AL++FQ M +IFGC  GI            
Sbjct: 67  DLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIE 126

Query: 111 ---------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYS 137
                                            C+KRQFEK K  L  ++E GL PD+ S
Sbjct: 127 SNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILS 186

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           YGT+IN L KSG+LL A+ +FDEM  RGV  +V+CYNILIDGF +KGD+++A EIW+RL+
Sbjct: 187 YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            E+SVYP+V TYN+MINGLCK G+ DE +EMW+RMKKNE+  D FT+ S IHGL KAGN 
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNF 306

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILI 317
             AE+V++EM+ESG+  D  TYNAM+ G  R GK+ +CFELW VM +  C N+VSYN+LI
Sbjct: 307 NAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLI 366

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
           +GLL+N KV++AI  W+LL E+   ADSTT+G+LINGLCKNGYLNKA++IL E E  G  
Sbjct: 367 QGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGAD 426

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          +G L  A  L+++M K+  KLN++  NSL+NG+++A KLE AI +
Sbjct: 427 LDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISV 486

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            +EM  K C+PTVVSYNT+INGLCK ERF +AY  +KEMLE+G KPDMITYSLLI+GLC+
Sbjct: 487 LREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCR 546

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            +K+DMAL L  Q + K   PD+ M+NI+IHGLC+A KV+ AL++++ M++ NCVP+LVT
Sbjct: 547 GEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVT 606

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           +NT+M+GL+K GDC +AL+IW+ ILE  L+PDIISYNIT KGLCSC+R+SDA EFL DAL
Sbjct: 607 HNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDAL 666

Query: 601 CRGILPTTITWHILVRAVMNN 621
            RGILP   TW++LVRAV+++
Sbjct: 667 DRGILPNAPTWNVLVRAVVDD 687



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 206/427 (48%), Gaps = 53/427 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + +++    N + +    PD++++ ++I+GL K+G+   A  VF EM E G+  +
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWE---------------------------------RL 196
           V  YN ++ G F+ G   +  E+W                                  +L
Sbjct: 325 VRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQL 384

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + E  +  +  TY ++INGLCK G  ++ L + +  +    + D+F Y S +HGLCK G 
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           +E A  +  +M ++   +++  +N++I+G+ RA K++E   +   M  K C   VVSYN 
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNT 504

Query: 316 LIRGLLENGKVDEA-ISIWELLREKNCNADSTTHGVLINGLCK---------------NG 359
           +I GL +  +  +A +S+ E+L E+    D  T+ +LI+GLC+               N 
Sbjct: 505 IINGLCKAERFSDAYLSLKEML-EEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563

Query: 360 YLNKAIQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            L   +Q+ N +  G     ++  A  +  +M +  C  +  T N++M G  +A     A
Sbjct: 564 RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEA 623

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + ++  +   G  P ++SYN    GLC   R  +A  F+ + L++G  P+  T+++L+  
Sbjct: 624 LKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRA 683

Query: 478 LCQSKKI 484
           +   K +
Sbjct: 684 VVDDKPL 690


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/679 (54%), Positives = 473/679 (69%), Gaps = 61/679 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S K +L LLK+EKNP  A ALFDSATR PGYAHS  ++HHILRRL + ++V HVSRI+E
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
           LI  Q+C C EDVALSVI+ YGKNSMPD+ALDVF+RM EIFGCE  I             
Sbjct: 68  LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                           C+K++FEKA+ FL+ +W++G KPDV+SY
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVIN L K+G L  AL +FDEM ERGV  +V CYNILIDGF K+ D+  A E+W+RL+ 
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           ++SVYPNV T+N+MI+GL KCGR D+CL++W+RMK+NEREKD +TY S IHGLC AGNV+
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
            AE V+ E+ E    +D VTYN M+ GFCR GKIKE  ELW +M  K  +N+VSYNILI+
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIK 367

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
           GLLENGK+DEA  IW L+  K   AD TT+G+ I+GLC NGY+NKA+ ++ EVE  G   
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         + RL +A++LV  M KHG +LN++ CN+L+ G I+ S+L  A F  
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +EM + GC PTVVSYN LI GLCK  +FGEA +FVKEMLE GWKPD+ TYS+L+ GLC+ 
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           +KID+AL+L  QFLQ G   DV M+NILIHGLCS GK++DA+ + +NM+ RNC  NLVTY
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTLM+G FK GD ++A  IW ++ +  L+PDIISYN  +KGLC C  +S A EF +DA  
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667

Query: 602 RGILPTTITWHILVRAVMN 620
            GI PT  TW+ILVRAV+N
Sbjct: 668 HGIFPTVYTWNILVRAVVN 686


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/679 (54%), Positives = 475/679 (69%), Gaps = 61/679 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S K +L LLK+EKNP  A ALFDSATR PGYAHS  ++HHILRRL + ++V HV RI+E
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVE 67

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------ 110
           LI  Q+C C EDVALSVI+ YGKNSMPD+ALDVF+RM EIFGCE GI             
Sbjct: 68  LIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEA 127

Query: 111 --------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                                           C+K++FEKA+ FLN +W++G KPDV+SY
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSY 187

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVIN L K+G L  AL +FDEM ER V  +V CYNILIDGF K+ D+  A ++W++L+ 
Sbjct: 188 STVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLE 247

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           ++SVYPNV T+N+MI+GL KCGR D+CL++WDRMK+NEREKD +TY S IHGLC  GNV+
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVD 307

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
            AE V+ E+VE   F+D VTYN M+ GFCR GKIKE  ELW +M ++  +N+VSYNILI+
Sbjct: 308 KAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIK 367

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
           GLLENGK+DEA  IW L+  K   AD+TT+G+ I+GLC NGY+NKA+ ++ EVE  G   
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHL 427

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         + RL +A++LV  M KHG +LN++ CN+L+ G I+ S+L +A  L 
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLM 487

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M + GC PTVVSYN LI GLC+  +FGEA +FVKEMLE G KPD+ TYS+L+ GLC+ 
Sbjct: 488 RGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRD 547

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           +KI++AL+L  QFLQ G  PDV M+NILIHGLCS GK++DA+ + +NM+ RNC  NLVTY
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTLM+G FK  D ++A  IW ++ +  L+PDIISYN  LKGLC C R+S A EF +DA  
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARN 667

Query: 602 RGILPTTITWHILVRAVMN 620
            GI PT  TW+ILVRAV+N
Sbjct: 668 HGIFPTVYTWNILVRAVVN 686



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 249/490 (50%), Gaps = 24/490 (4%)

Query: 154 ALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNV 211
           AL VF  M E  G E  +  YN L++ F +   +++ + ++     ET+ V PN+ TYNV
Sbjct: 97  ALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYF--ETAGVAPNLQTYNV 154

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I   CK   F++     + M K   + D F+Y + I+ L K G ++ A  ++ EM E  
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEA 329
           +  D   YN +IDGF +    K   +LW+ +     +  NV ++NI+I GL + G+VD+ 
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------GG 375
           + IW+ +++     D  T+  LI+GLC  G ++KA  + NE+ E              GG
Sbjct: 275 LKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGG 334

Query: 376 E---GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G++ ++  L   M++    +N  + N L+ G ++  K++ A  +++ M  KG +  
Sbjct: 335 FCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
             +Y   I+GLC      +A   ++E+  KG   D+  Y+ +I+ LC+ ++++ A  L  
Sbjct: 394 NTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVK 453

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  + G   +  + N LI GL    ++ DA  L   M K  C+P +V+YN L+ GL + G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAG 513

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              +A      +LE  L+PD+ +Y+I L GLC   ++  A E  +  L  G+ P  +  +
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573

Query: 613 ILVRAVMNNG 622
           IL+  + + G
Sbjct: 574 ILIHGLCSVG 583



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 192/402 (47%), Gaps = 55/402 (13%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+Y+Y ++I+GL   G++  A +VF+E+ ER    +VV YN ++ GF + G    + E+W
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
              +ME     N+V+YN++I GL + G+ DE   +W  M       D+ TY  FIHGLC 
Sbjct: 349 R--IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCV 406

Query: 254 AGNV-----------------------------------EGAERVYREMVESGIFVDAVT 278
            G V                                   E A  + +EM + G+ +++  
Sbjct: 407 NGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHV 466

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
            NA+I G  R  ++ +   L   MG+ GCL  VVSYNILI GL E GK  EA +  + + 
Sbjct: 467 CNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEML 526

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
           E     D  T+ +L+ GLC++  +  A+++ ++  + G                  G+L 
Sbjct: 527 ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLD 586

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA +++  M+   C  N  T N+LM G+ +      A  ++  M + G  P ++SYNT++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            GLC   R   A  F  +    G  P + T+++L+  +   K
Sbjct: 647 KGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/682 (53%), Positives = 477/682 (69%), Gaps = 73/682 (10%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLI-DPKLVV-HVSRI 60
           +S  RLL LLKAEK+P +AL +FD+A R PG++ S  +FHHILRR+  DP L++ H  RI
Sbjct: 8   LSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRI 67

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI----------- 109
           +  I    C CPEDV L++++AY K  MP++AL VFQ M  +FGC   I           
Sbjct: 68  IAAIH---CPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFV 124

Query: 110 ---------------------------------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                                            +C+K +FEK +  L  +W  G+ PD  
Sbjct: 125 ESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRI 184

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT+I G+ KSGDL  AL VFDEM ERGVE +VVCYN++IDGFFK+GD+++A E+WERL
Sbjct: 185 TYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERL 244

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + E  V+P+VV+YNVMI+GLCKCGRF E LE+W+RMKKNER+ D FTY + IHGL +AG+
Sbjct: 245 LREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGD 304

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           + GA +VY EMV  G+  D VT NAM++G C+AG ++ECFELWE MG+    NV SYNI 
Sbjct: 305 LGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIF 364

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE--EG 374
           ++GL ENGKVD+A+ +W+ L E    ADS T+GV+++GLC NGY+N+A+Q+L E E  EG
Sbjct: 365 LKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG 420

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 EGRL +A  +V  M+K GCK N++ CN L++GF++ SKL++A
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSA 480

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + +F+EMS KGCS TVVSYN LINGL + ERF EAY  V EMLEKGWKPD+ITYS LI G
Sbjct: 481 VKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGG 540

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           L +S  +D AL+L  QFL  G  PD+ MYNI+IH LCS+GKVEDALQLYS ++++ CV N
Sbjct: 541 LYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-N 599

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           LVT+NT+M+G +K G+C+ A +IW HILE+ L+PDIISYNITLKGLCSC R++DA  FL+
Sbjct: 600 LVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLD 659

Query: 598 DALCRGILPTTITWHILVRAVM 619
           DAL RG LPT ITW+ILVRAV+
Sbjct: 660 DALVRGFLPTAITWNILVRAVI 681



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 3/248 (1%)

Query: 378 RLADAASLVNRMDKH--GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           R+ + A  V +   H  GC     + N+L+N F+++ +   A   FK       SP V +
Sbjct: 91  RMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVET 150

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN L+  +CK   F +    +  M   G  PD ITY  LI G+ +S  +  AL++  +  
Sbjct: 151 YNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMR 210

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDC 554
           ++G  PDV  YN++I G    G    A +++  + +   V P++V+YN ++ GL K G  
Sbjct: 211 ERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRF 270

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            + LEIW  + +   + D+ +Y+  + GL     +  A +   + + RG+ P  +T + +
Sbjct: 271 SEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAM 330

Query: 615 VRAVMNNG 622
           +  +   G
Sbjct: 331 LNGLCKAG 338


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 410/686 (59%), Gaps = 71/686 (10%)

Query: 7   RLLNLLKAEKNPHTALALFDS-ATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           RLL L+K+E +   ALA  +   +  P +     L  H+LRRL       H+  +L L+ 
Sbjct: 15  RLLELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSS-PSHLPCLLNLLP 73

Query: 66  I--QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------------- 109
               +    E  AL V+ A+ +  MPD ALD F+ +  I GC  GI              
Sbjct: 74  RLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRAR 133

Query: 110 ----------------------------------LCRKRQFEKAKRFLNSLWEKGLKPDV 135
                                             LC +   ++A    +SL  + + PD 
Sbjct: 134 RFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDC 193

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T++ GL K   L  AL + DEM   GV+ +VVCYN L+ G FK G++ +   +W++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +    PN+ TYNVM++GLCK GRF E  E+W+RM  N  + D  TY   IHGLC++G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
           +V+GA RVY E++++G+ +DA  YN+++ GFC+AG+++E ++ W+  G  G  N+ +YNI
Sbjct: 314 DVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNI 373

Query: 316 LIRGLLENGKVDEAISIWELL-REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +I+GL ++G VDEAI +W+LL ++  C  D+ T G LI+GLC+NG+ NKA  I  E    
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVS 433

Query: 375 GE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G+                 GRL DA  +  +MDK GCK N++  N+L++GF Q  +  +A
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + ++ +M+  GCSPTV++YNTLI+GLCK E++ EA S  +EM+E G+ PD+ TY  LI G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVP 536
           L   KKID AL +  Q L KG   DV M+NILIHGLCSAGKV++AL ++S+MK K+NC P
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           NLVTYNTLMDGL++TG  DKA  +W  I E+ L PDIISYN  +KGLCSC R+ +  + L
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           ++ L RGI+PT ITW+ILVRAV+  G
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 227/431 (52%), Gaps = 22/431 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F++       +    L+PDV +YG +I+GL +SGD+ GA  V+ E+ + G+  +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN L+ GF + G    A + W+      +   N+ TYN+MI GL   G  DE +E+W
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGF--AGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 230 DRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           D ++K+     D+ T+ + IHGLC+ G    A  ++ E   SG  +D  +Y++MI+G C 
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++ +  +++E M + GC  N   YN LI G  +  +  +A+ I+  + +  C+    T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  LI+GLCK     +A  +  E+ E G                 + ++ DA S+  ++ 
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERF 449
             G K++    N L++G   A K++ A+ +F +M  +K C P +V+YNTL++GL +    
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A +    + E G +PD+I+Y+  I GLC   +I   ++L  + L +G  P V  +NIL
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691

Query: 510 IHGLCSAGKVE 520
           +  +   G ++
Sbjct: 692 VRAVIKYGPIQ 702



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 122/249 (48%), Gaps = 10/249 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---- 109
           +V   ++ E ++   C     +  ++I  + +      A+ ++ +M +  GC   +    
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYN 513

Query: 110 -----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+  ++++A      + E G  PD+ +YG++I GL     +  AL+++ ++  +
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G++ +V+ +NILI G    G    A  ++  +  + +  PN+VTYN +++GL + G  D+
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +W  + ++  E D  +Y + I GLC    +    ++  E++  GI    +T+N ++ 
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 285 GFCRAGKIK 293
              + G I+
Sbjct: 694 AVIKYGPIQ 702


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/686 (41%), Positives = 410/686 (59%), Gaps = 71/686 (10%)

Query: 7   RLLNLLKAEKNPHTALALFDS-ATREPGYAHSPHLFHHILRRLI--DPKLVVHVSRILEL 63
           RLL L+K+E +   ALA  +   +  P +     L  H+LRRL    P  +  +  +L  
Sbjct: 15  RLLELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSSPSHLPRLLNLLPR 74

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------------- 109
           +  +  +  E  AL V+ A+ +  MPD ALD F+ +  I GC  GI              
Sbjct: 75  LRHRPRFS-ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRAR 133

Query: 110 ----------------------------------LCRKRQFEKAKRFLNSLWEKGLKPDV 135
                                             LC +   ++A    +SL  + + PD 
Sbjct: 134 RFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDR 193

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T++ GL K   L  AL + DEM    V+ +VVCYN L+ G FK G++ +   +W++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +    PN+ TYNVM++GLCK GRF E  E+W+RM  N  + D  TY   IHGLC++G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
           +V+GA RVY E++++G+ +DA  YN+++ GFC+AG+++E ++ W+  G  G  N+ +YNI
Sbjct: 314 DVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNI 373

Query: 316 LIRGLLENGKVDEAISIWELL-REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +I+GL ++G VDEAI +W+LL ++  C  D+ T G LI+GLC+NG+ NKA  I  E    
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVS 433

Query: 375 GE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G+                 GRL DA  +  +MDK GCK N++  N+L++GF Q  +  +A
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + ++ +M+  GCSPTV++YNTLI+GLCK E++ EA S  +EM+E G+ PD+ TY  LI G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVP 536
           L   KKID AL +  Q L KG   DV M+NILIHGLCSAGKV++AL ++S+MK K+NC P
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           NLVTYNTLMDGL++TG  DKA  +W  I E+ L PDIISYN  +KGLCSC R+ +  + L
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           ++ L RGI+PT ITW+ILVRAV+  G
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 227/431 (52%), Gaps = 22/431 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F++       +    L+PDV +YG +I+GL +SGD+ GA  V+ E+ + G+  +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN L+ GF + G    A + W+      +   N+ TYN+MI GL   G  DE +E+W
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGF--AGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 230 DRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           D ++K+     D+ T+ + IHGLC+ G    A  ++ E   SG  +D  +Y++MI+G C 
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++ +  +++E M + GC  N   YN LI G  +  +  +A+ I+  + +  C+    T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  LI+GLCK     +A  +  E+ E G                 + ++ DA S+  ++ 
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERF 449
             G K++    N L++G   A K++ A+ +F +M  +K C P +V+YNTL++GL +    
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A +    + E G +PD+I+Y+  I GLC   +I   ++L  + L +G  P V  +NIL
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691

Query: 510 IHGLCSAGKVE 520
           +  +   G ++
Sbjct: 692 VRAVIKYGPIQ 702



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 122/249 (48%), Gaps = 10/249 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---- 109
           +V   ++ E ++   C     +  ++I  + +      A+ ++ +M +  GC   +    
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYN 513

Query: 110 -----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+  ++++A      + E G  PD+ +YG++I GL     +  AL+++ ++  +
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G++ +V+ +NILI G    G    A  ++  +  + +  PN+VTYN +++GL + G  D+
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +W  + ++  E D  +Y + I GLC    +    ++  E++  GI    +T+N ++ 
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 285 GFCRAGKIK 293
              + G I+
Sbjct: 694 AVIKYGPIQ 702


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 290/686 (42%), Positives = 399/686 (58%), Gaps = 71/686 (10%)

Query: 7   RLLNLLKAEKNPHTALALFDS-ATREPGYAHSPHLFHHILRRLI--DPKLVVHVSRILEL 63
           RLL L+K+E +P TALA  D   +  P Y     L  H+LRRL    P  +  +  IL  
Sbjct: 16  RLLELMKSEPDPATALAHLDLLVSTWPAYTPPQPLLFHLLRRLATSSPSRLPRLLGILPR 75

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKR 114
           +  +  +  E  AL V+ A+ +  MPD AL  F+R+    GC  G+           R R
Sbjct: 76  LRHRPRFS-ESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRAR 134

Query: 115 QFEKAKRFLNSLWE---------------------------------------KGLKPDV 135
           +F  A  F  SL                                         +GL PD 
Sbjct: 135 RFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDR 194

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+++G VK+  L  AL + DEM    V+ + VCYN L+ G F+ G++ +A  +WE+
Sbjct: 195 ITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQ 254

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +    PN+ TYNVM++GLCK G F E  ++W+RM  N  + D  TY + IHGLC++ 
Sbjct: 255 LVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRST 314

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
           +V+ A RVY EM+++G+  D V YN+++ GFC AG++ E ++ W+ M   G  NV SYNI
Sbjct: 315 DVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNI 374

Query: 316 LIRGLLENGKVDEAISIWELL-REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +++GL + G VD+A  +WELL ++ + + D  T   +I+GLC+ G+ NK++QIL E    
Sbjct: 375 MLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTS 434

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 +GRL DA  L  ++     K N++  N+L+NGF QASK  +A
Sbjct: 435 GKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           I ++ +M+   CSPT ++YNTLI+GLCK E++ EA  F +EMLEKG   D+ TY  LI G
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVP 536
           LC+ KKID AL L  Q L KG   DV M+NILIHGLCSAGKV++A QL S MK K NC P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTYNTLMDG ++TG  DKA  +W  ILE  L PDIISYN  +KGLCSC+R  +  + L
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLL 674

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           N+ L  GI+PT ITW+ILVRAV+  G
Sbjct: 675 NEMLASGIIPTAITWNILVRAVIKYG 700



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 227/446 (50%), Gaps = 29/446 (6%)

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K  M  +A DV++RM           +G     LCR    + A R  + + + GL PDV 
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            Y +++ G   +G +  A   +D M   G+  NV  YNI++ G F  G   +A ++WE L
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             + S+ P++VT++ MI+GLC+ G  ++ L++ +  + + +E D F+Y S I GLCK G 
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           ++ A ++Y ++       ++  YNA+I+GFC+A K  +   ++  M    C    ++YN 
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI GL +  K  EA      + EK C  D  T+G LI GLC++  ++ A+ + N++    
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI---- 571

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVV 434
                        +DK G + +    N L++G   A K++ A  L  EM  K  C P VV
Sbjct: 572 -------------LDK-GLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVV 617

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNTL++G  +   F +A S    +LE G  PD+I+Y+  I GLC   +    ++L  + 
Sbjct: 618 TYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEM 677

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVE 520
           L  G  P    +NIL+  +   G ++
Sbjct: 678 LASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/685 (40%), Positives = 401/685 (58%), Gaps = 70/685 (10%)

Query: 7   RLLNLLKAEKNPHTALALFDS-ATREPGYAHSPHLFHHILRRLI--DPKLVVHVSRILEL 63
           RLL L+K+E++P  AL+  +   +  P +     L  H+LRRL    P  +  +  +L  
Sbjct: 15  RLLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPR 74

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------------- 109
           +  +  +  E  AL V+ A+ +  MPD AL  F+ +  + GC  G+              
Sbjct: 75  MRHRPRFS-ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRAR 133

Query: 110 ----------------------------------LCRKRQFEKAKRFLNSLWEKGLKPDV 135
                                             LC +   ++A    +SL  +G+ PD 
Sbjct: 134 RYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDR 193

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+++GL K   L  AL + DEM   GV+ + VCYN L+ G F+ G + +A ++WE+
Sbjct: 194 VTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQ 253

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +    PN+ TY VM++GLCK GRF E  E+W RM  N  + D+ TY   IHGLC++G
Sbjct: 254 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
           +V+ A RVY +MV++G+ +D   YN++I GFC  G+  E ++ W+  G  G   + +YNI
Sbjct: 314 DVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNI 373

Query: 316 LIRGLLENGKVDEAISIWELLR-EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           + +GLL++G V EA  + + L  + +C+ D  T G LI+GLC+NGY N+A +IL +    
Sbjct: 374 MTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433

Query: 375 GE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           GE                 GR  DA  +   M K GCK N++  N+L+NGF + SK+ +A
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           I ++ EM+  GC PT+++YNTLI+GLCK E++ EA S  KEMLE+G+KPD+ TY+ LI G
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+ KK+D+AL++  + L  G   DV ++NILIHGLCSAGKV++A  +Y  MK++NC PN
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           LVTYNTLMDG ++ G  DKA  +W  IL+  L+PDI++YN  +KGLCSC+R  +    LN
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLN 673

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           + L  GI+PT ITW ILVRAV+  G
Sbjct: 674 EVLATGIMPTVITWSILVRAVIKYG 698



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 232/480 (48%), Gaps = 62/480 (12%)

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDV 135
           +  M +KA+ V++++    G    +         LC+  +F++A    + +     + D 
Sbjct: 240 RTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADT 299

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE- 194
            +YG +I+GL +SGD+  A  V+ +M + G+  +V  YN LI GF + G    A + W+ 
Sbjct: 300 VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDS 359

Query: 195 ---------------------------------RLVMETSVYPNVVTYNVMINGLCKCGR 221
                                            +L  + S  P+ VT+  +I+GLC+ G 
Sbjct: 360 TGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            +   E+ +  + +  E D F+Y S I+  CK G    A  VY+ MV+ G   ++  YNA
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I+GFCR  KI +  +++  M   GC   +++YN LI GL +  K  EA S+ + + E+ 
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              D  T+  LI GLC++  ++ A++I +E+ + G                   +++   
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG------------------LQVDVMV 581

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L++G   A K++ A  ++ EM  K CSP +V+YNTL++G  ++    +A S    +L
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL 641

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G KPD++TY+  I GLC   +    + L  + L  G  P V  ++IL+  +   G ++
Sbjct: 642 DNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/376 (57%), Positives = 276/376 (73%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GA+RVY EM ES +  DAV YNAM+ GF R G+IK+CF+LWE+MGRKG  NVV
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQNVV 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NG+VD+AISIWEL+++     DS T+G++I+G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K GCK NA+  N+L+NGF+ ASK 
Sbjct: 121 EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++AI +F+EM    CSPT+V+Y+TLINGLCK ERF EAY  VKEMLEKGWKP +ITYSLL
Sbjct: 181 DDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLCQ  K++MAL+L  Q L KGF PDV M+NILIHGLCS GK + AL LY +M   NC
Sbjct: 241 MKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DAL + I PT IT
Sbjct: 361 FLHDALTKKIFPTIIT 376



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 197/395 (49%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ EM E  V  + V YN ++ GF + G      ++WE +  + S   NV
Sbjct: 2   ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGS--QNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V++N+M+ GL   G  D+ + +W+ MKK+   +DS TY   I G CK G +  +  V   
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+  K+ +   +   M + GC  N   YN LI G +   K
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+AI ++  +   +C+    T+  LINGLCK                 GE R ++A  L
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCK-----------------GE-RFSEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G K    T + LM G  Q  K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++  A+    +   +   P ++T
Sbjct: 342 YNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + AKR    + E  + PD   Y  ++ G ++ G +     +++ M  +G + NV
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +NI++ G F  G+  +A  IWE L+ ++    + +TY ++I+G CK G  ++ L + +
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWE-LMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D+F Y + I+GLCK   ++ A  V   M++SG   +A  YN +I+GF  A 
Sbjct: 119 IAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   ++  MG   C   +V+Y+ LI GL +  +  EA  + + + EK       T+ 
Sbjct: 179 KFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC+   +  A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVLS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K ++A+ L+ +M+   C+P +V++NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I  A+      L K   P +
Sbjct: 341 SYNITLKGLCSCNRISFAILFLHDALTKKIFPTI 374



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  ++  + E   + D+  +  ++ G  +                   GR+ D
Sbjct: 2   ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLR------------------VGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + N  + N +M G     +++ AI +++ M + G     ++Y  +I+
Sbjct: 44  CFDLWELMGRKGSQ-NVVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIID 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++    KG   D   YS +INGLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+G   A K +DA++++  M   +C P +VTY+TL++GL K     +A ++ 
Sbjct: 163 NAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+  +P +I+Y++ +KGLC   ++  A +  N  L +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 151/300 (50%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V     I EL++ +  +  + +   +I   + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDNGEVDKAISIWELMK-KSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIA 120

Query: 100 N------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
                  + F   A I  LC++ + +KA   LN + + G KP+ + Y T+ING V +   
Sbjct: 121 EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ VF EM        +V Y+ LI+G  K   +  A ++ + + +E    P V+TY++
Sbjct: 181 DDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEM-LEKGWKPCVITYSL 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ GLC+  + +  L++W+++     + D   +   IHGLC  G  + A  +Y +M    
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VT+N +++GF + G I+    +W  + R G   +++SYNI ++GL    ++  AI
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAI 359


>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 376

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/376 (57%), Positives = 274/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C + +++GAERVY+EMVES +  DAV YNAM++G+ R G+IK+CFELWE+MG +G  NV+
Sbjct: 1   CDSEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGGQNVI 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL  NG+VD+AISIWEL+++     DSTTH +LI+G CKNGY+NK++++L   
Sbjct: 61  SFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           EE G                 E +L  AAS++N M K+G K NA+  N L+NGF+ ASK 
Sbjct: 121 EEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
            +AI +F+EM    CSPT+V+YNTLINGLCK ERF EAY  VKEMLEKGWKP +ITYSLL
Sbjct: 181 YDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLCQ  K++MA++L  Q + KG  PDV M+NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 IKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDI+SYNITLKGLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL DAL   I PT IT
Sbjct: 361 FLXDALANAIAPTXIT 376



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 196/394 (49%), Gaps = 21/394 (5%)

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           S D+ GA  V+ EM E  +  + V YN +++G+F+ G      E+WE  +M T    NV+
Sbjct: 3   SEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWE--LMGTEGGQNVI 60

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           ++N+M+ GL   G  D+ + +W+ MKK+   +DS T+   I G CK G +  + RV    
Sbjct: 61  SFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIA 120

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
            E G  ++A  Y+AMI+G CR  K+ +   +   M + G   N   YNILI G +   K 
Sbjct: 121 EEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKF 180

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +AI +++ +   +C+    T+  LINGLCK                 GE R A+A  LV
Sbjct: 181 YDAIRVFQEMGSTDCSPTIVTYNTLINGLCK-----------------GE-RFAEAYDLV 222

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M + G K    T + L+ G  Q  K+E AI L+ ++  KG  P V  +N LI+GLC V
Sbjct: 223 KEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSV 282

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  Y
Sbjct: 283 GKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSY 342

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           NI + GLCS  ++  A     +       P  +T
Sbjct: 343 NITLKGLCSCNRISFANLFLXDALANAIAPTXIT 376



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 189/392 (48%), Gaps = 21/392 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  + G +     +++ M   G + NV
Sbjct: 1   CDSEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGGQ-NV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + +NI++ G F  G+  +A  IWE L+ ++    +  T+ ++I+G CK G  ++ L + +
Sbjct: 60  ISFNIMMRGLFNNGEVDKAISIWE-LMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     ++F Y + I+GLC+   ++ A  V   M+++G   +A  YN +I+GF  A 
Sbjct: 119 IAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   +++ MG   C   +V+YN LI GL +  +  EA  + + + EK       T+ 
Sbjct: 179 KFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI GLC+   +  AIQ+ N+V                     G K +    N L++G  
Sbjct: 239 LLIKGLCQGHKVEMAIQLWNQVIS------------------KGLKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V++NTL+ G  K      A      +L  G +PD++
Sbjct: 281 SVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIV 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           +Y++ + GLC   +I  A       L     P
Sbjct: 341 SYNITLKGLCSCNRISFANLFLXDALANAIAP 372



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 148/299 (49%), Gaps = 19/299 (6%)

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           +D A  +++ + E   + D+  +  ++NG  +                   GR+ D   L
Sbjct: 6   IDGAERVYKEMVESKMSPDAVVYNAMLNGYFR------------------VGRIKDCFEL 47

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M   G + N  + N +M G     +++ AI +++ M + G      ++  LI+G CK
Sbjct: 48  WELMGTEGGQ-NVISFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCK 106

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
                ++   ++   EKG   +   YS +INGLC+  K+D A  +    ++ G  P+  +
Sbjct: 107 NGYINKSLRVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHV 166

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YNILI+G   A K  DA++++  M   +C P +VTYNTL++GL K     +A ++   +L
Sbjct: 167 YNILINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEML 226

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           E+  +P +I+Y++ +KGLC   ++  A +  N  + +G+ P     +IL+  + + G +
Sbjct: 227 EKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKT 285



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 10/289 (3%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           F+ ++R L +   V     I EL++             +I  + KN   +K+L V +   
Sbjct: 62  FNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAE 121

Query: 101 E------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
           E       F   A I  LCR+ + +KA   LN + + G KP+ + Y  +ING V +    
Sbjct: 122 EKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFY 181

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A+ VF EM        +V YN LI+G  K   +  A ++ + + +E    P V+TY+++
Sbjct: 182 DAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEM-LEKGWKPCVITYSLL 240

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I GLC+  + +  +++W+++     + D   +   IHGLC  G  + A  +Y +M     
Sbjct: 241 IKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNC 300

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
             + VT+N +++GF + G I+    +W  + R G   ++VSYNI ++GL
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGL 349



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E A +  N +  KGLKPDV  +  +I+GL   G    AL ++ +M       N
Sbjct: 244 LCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPN 303

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           +V +N L++GF+K GD   A  IW R ++   + P++V+YN+ + GLC C R 
Sbjct: 304 LVTHNTLMEGFYKDGDIRNALVIWAR-ILRNGLQPDIVSYNITLKGLCSCNRI 355



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A+ VFQ M     C   I         LC+  +F +A   +  + EKG KP V +Y  +I
Sbjct: 183 AIRVFQEMGST-DCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLI 241

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            GL +   +  A+ +++++  +G++ +V  +NILI G    G    A  ++  +    + 
Sbjct: 242 KGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDM-NRWNC 300

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+VT+N ++ G  K G     L +W R+ +N  + D  +Y   + GLC    +  A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANL 360

Query: 263 VYREMVESGIFVDAVT 278
              + + + I    +T
Sbjct: 361 FLXDALANAIAPTXIT 376


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/376 (57%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G +  AERVY+EM ES I  DAV YNAM++GF +AG+IK CF+LWE+MGR+G  NV 
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN-E 370
           S+N ++RGL  NG+VDE  SIWEL++E     DSTT+G+L++G CKNGY NK++ +L   
Sbjct: 61  SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120

Query: 371 VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            +EGG                 G+L  A S++N M + GCK N    N+L+NG + ASK 
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +FKE+  + CSPT+V+YNTLINGLCK ERF EAY  VKEMLEKGW P +ITYSLL
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLCQ  K++MAL+L  Q + KGF PDV M+NILIHGLCS GK E A +LY +M   NC
Sbjct: 241 IKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVTYNTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLC+C+R+S A  
Sbjct: 301 APNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FLNDA+ + I+PT IT
Sbjct: 361 FLNDAVTKNIVPTVIT 376



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SG +  A  V+ EM E  +  + V YN +++GFFK G      ++WE +  E S   NV
Sbjct: 2   ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGS--RNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N M+ GL   G  DE   +W+ MK++   +DS TY   +HG CK G    +  V   
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI G C+ GK+ +   +   M   GC  N   YN LI GLL   K
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI +++ L  ++C+    T+  LINGLCK                 GE R A+A  L
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCK-----------------GE-RFAEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + L+ G  Q  K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++TY+ L+ G  +      AL +  + L+ G  PD+  
Sbjct: 282 VGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLC+  ++  A+   ++   +N VP ++T
Sbjct: 342 YNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 189/394 (47%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C       A+R    + E  + PD   Y  ++NG  K+G +     +++ M   G   NV
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N ++ G F  G+      IWE L+ E+    +  TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWE-LMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             K+     D+F Y + I GLCK G ++ A  V   M+ESG   +   YNA+I+G   A 
Sbjct: 119 IAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +++ +G + C   +V+YN LI GL +  +  EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI GLC++  +  A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 LLIKGLCQDHKVEMALQLWNQV------------------ISKGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K E+A  L+ +M+   C+P +V+YNTL+ G  K      A      +L  G  PD+I
Sbjct: 281 SVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I +A+      + K   P V
Sbjct: 341 SYNITLKGLCACNRISVAILFLNDAVTKNIVPTV 374



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 151/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G ++ A  +++ + E   + D+  +  ++NG  K                   GR+ +
Sbjct: 2   ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFK------------------AGRIKN 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + N  + N++M G     +++    +++ M   G      +Y  L++
Sbjct: 44  CFDLWELMGREGSR-NVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   ++G   D   YS +I+GLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  +  R+C P +VTYNTL++GL K     +A ++ 
Sbjct: 163 NTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+   P +I+Y++ +KGLC   ++  A +  N  + +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L +   V  V  I EL++ +  +  +     + +  + KN   +K+L V +  
Sbjct: 62  FNTMMRGLFNNGEVDEVFSIWELMK-ESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC+  + +KA   LN + E G KP+   Y  +INGL+ +   
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ VF E+  R     +V YN LI+G  K   +  A ++ + + +E    P+V+TY++
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEM-LEKGWNPSVITYSL 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I GLC+  + +  L++W+++     + D   +   IHGLC  G  E A  +Y +M    
Sbjct: 240 LIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VTYN +++GF + G  +    +W  + R G L +++SYNI ++GL    ++  AI
Sbjct: 300 CAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAI 359



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E A +  N +  KG KPDV  +  +I+GL   G    A  ++ +M       N
Sbjct: 244 LCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPN 303

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD-ECLEM 228
           +V YN L++GF+K GD   A  IW R ++   + P++++YN+ + GLC C R     L +
Sbjct: 304 LVTYNTLMEGFYKGGDTRNALVIWAR-ILRNGLLPDIISYNITLKGLCACNRISVAILFL 362

Query: 229 WDRMKKN 235
            D + KN
Sbjct: 363 NDAVTKN 369



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A   +  + EKG  P V +Y  +I GL +   +  AL +++++  +G + +
Sbjct: 209 LCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A E++  +    +  PN+VTYN ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGKTEHASELYFDM-NHWNCAPNLVTYNTLMEGFYKGGDTRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N    D  +Y   + GLC    +  A     + V   I    +T
Sbjct: 328 ARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/376 (56%), Positives = 273/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+EM ES +  DAV YNAM++GF RAG+IK+C ELWE+MGR+   NVV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQNVV 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL  NG VD+AISIWEL+ +     DSTT+G+L++G CKNGY+NK++++L   
Sbjct: 61  SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           EE G                 E +L +A S++N M K+G   NA+  N+L+NGF+  SK 
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++AI +F+EM    CSPTVV+YNTLINGLCK ERF EAY  VKEMLEKGWKP +ITYSLL
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLCQ  K++MAL+L  Q +  G  PDV M NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 MKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDI+SYNITLKGLCSCSR+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL DAL + I P+ IT
Sbjct: 361 FLQDALAKKIAPSIIT 376



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 198/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ EM E  V  + V YN +++GFF+ G      E+WE +  E S   NV
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXS--QNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V++N+M+ GL   G  D+ + +W+ M ++   +DS TY   + G CK G +  + RV   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVSYNILIRGLLENGK 325
             E G  +DA  Y+AMI+G C+  K+ E   +   M +  G  N   YN LI G +   K
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+AI ++  +   NC+    T+  LINGLCK                 GE R A+A  L
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCK-----------------GE-RFAEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G K    T + LM G  Q  K+E A+ L+ ++   G  P V   N LI+GLC 
Sbjct: 222 VKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++  A+    +   +   P+++T
Sbjct: 342 YNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  ++G +   + ++ E+  R    NV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +NI++ G F  GD  +A  IWE L+ ++    +  TY ++++G CK G  ++ L + +
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWE-LMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M+++G   +A  YN +I+GF    
Sbjct: 119 IAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   ++  MG   C   VV+YN LI GL +  +  EA  + + + EK       T+ 
Sbjct: 179 KFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC+   +  A+Q+ N+V                    +G K +    N L++G  
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVIS------------------NGLKPDVQMLNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V++NTL+ G  K      A      +L  G +PD++
Sbjct: 281 SVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIV 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I  A+      L K   P +
Sbjct: 341 SYNITLKGLCSCSRISFAILFLQDALAKKIAPSI 374



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  +                   GR+ D
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFR------------------AGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M +   + N  + N +M G      ++ AI +++ M++ G      +Y  L++
Sbjct: 44  CIELWELMGREXSQ-NVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVD 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   EKG   D   YS +INGLC+  K+D A+ +    ++ G TP
Sbjct: 103 GFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+G     K +DA++++  M   NC P +VTYNTL++GL K     +A ++ 
Sbjct: 163 NAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+  +P +I+Y++ +KGLC   ++  A +  N  +  G+ P     +IL+  + + 
Sbjct: 223 KEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 142/294 (48%), Gaps = 10/294 (3%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   DKA+ +++ M +         +G      C+     K+ R L    EKG   D ++
Sbjct: 72  NGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +INGL K   L  A++V + M + G   N   YN LI+GF     +  A  ++ R +
Sbjct: 132 YSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVF-REM 190

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
             T+  P VVTYN +INGLCK  RF E  ++   M +   +    TY   + GLC+   V
Sbjct: 191 GSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A +++ +++ +G+  D    N +I G C  GK +    L+  M R  C  N+V++N L
Sbjct: 251 EMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTL 310

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L +
Sbjct: 311 MEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQD 364


>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 375

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/376 (56%), Positives = 271/376 (72%), Gaps = 18/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+ +GAERVY EM E+ +  DAV YNAM++G+ R G+IK CFELWE+MGRKG  NV 
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSRNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NG+VD+ ISIWEL+ E     DS T+G+L++GLCKNGY NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L +A S+++ M K+GCK N +  N+L+NGF+ ASK 
Sbjct: 121 EGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+A  +F+EM    CSP +V+YNTLINGLCK ERFGEAY  VKEMLEKGWKP + TYSLL
Sbjct: 181 EDATRVFREMGTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLL 239

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K+DMA+ L  Q + KGF PDV M+NILIHGLCS GK + AL LY NM   NC
Sbjct: 240 MKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNC 299

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVTYNTLM+G +K GD   AL IW HIL   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 300 APNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAIL 359

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + ++PT IT
Sbjct: 360 FLHDAVTKKLVPTIIT 375



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 185/377 (49%), Gaps = 19/377 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R  N + E  + PD   Y  ++NG  + G +     +++ M  +G   NV
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G+  +   IWE L++E     + +TY ++++GLCK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFDNGEVDQVISIWE-LMIENGFGEDSITYGILVDGLCKNGYANKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D+F+Y + I+GLCK   ++ A  V   MV++G   +   YNA+I+GF  A 
Sbjct: 119 IAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGAS 178

Query: 291 KIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           K ++   ++  MG     N+V+YN LI GL +  +  EA  + + + EK      +T+ +
Sbjct: 179 KFEDATRVFREMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSL 238

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L+ GLC    L+ AI + N+V   G                  G+   A SL   M+   
Sbjct: 239 LMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWN 298

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T N+LM GF +   L NA+ ++  + R G  P ++SYN  + GLC   R   A 
Sbjct: 299 CAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAI 358

Query: 454 SFVKEMLEKGWKPDMIT 470
            F+ + + K   P +IT
Sbjct: 359 LFLHDAVTKKLVPTIIT 375



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 159/358 (44%), Gaps = 25/358 (6%)

Query: 37  SPHLFHHILRRLIDPKLVVH---------VSRI---LELIEIQKCYCPEDVALSVIQAYG 84
           +  +++ +    + P  VV+         V RI    EL E+       +VA   I   G
Sbjct: 9   AERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSRNVASFNIMMRG 68

Query: 85  --KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
              N   D+ + +++ M E         +G     LC+     K+   L     KG   D
Sbjct: 69  LFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLD 128

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            +SY  +INGL K   L  A++V   M + G + N   YN LI+GF     +  A  ++ 
Sbjct: 129 AFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFR 188

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
              M T   PN+VTYN +INGLCK  RF E  ++   M +   +    TY   + GLC  
Sbjct: 189 E--MGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLG 246

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             ++ A  ++ +++  G   D   +N +I G C  GK +    L+  M    C  N+V+Y
Sbjct: 247 HKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTY 306

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           N L+ G  ++G +  A++IW  +       D  ++ + + GLC    ++ AI  L++ 
Sbjct: 307 NTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDA 364


>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 376

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/376 (56%), Positives = 270/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YN M++GF R G+IK+CFELWE+MGR+G  NV 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREGSRNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NG+VDE ISIWEL++      DS T+G+L++G CKN Y+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K GCK  A+  N+L+NG + ASK 
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+A  +F EM    CSPT+V+YNTLINGLCK ERFGEAY  VKEMLEKGW   +ITYSLL
Sbjct: 181 EDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC   K++MAL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY ++   NC
Sbjct: 241 IKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDIISYNITLKGLCSC+R+SD+  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDSIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DAL + I+PT IT
Sbjct: 361 FLHDALTKKIVPTIIT 376



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 198/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++GFF+ G      E+WE +  E S   NV
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREGS--RNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G  DE + +W+ MK +   +DS TY   +HG CK   +  +  V   
Sbjct: 60  ASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+  K+ +   +   M + GC      YN LI GL+   K
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++A  ++  +   +C+    T+  LINGLCK                 GE R  +A  L
Sbjct: 180 FEDAFRVFHEMGTTHCSPTIVTYNTLINGLCK-----------------GE-RFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + L+ G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   ++      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ D++    +   +  VP ++T
Sbjct: 342 YNITLKGLCSCNRISDSILFLHDALTKKIVPTIIT 376



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 183/378 (48%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y T++NG  + G +     +++ M   G   NV
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREG-SRNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G+      IWE L+  +    + +TY ++++G CK    ++ L + +
Sbjct: 60  ASFNIMMRGLFDNGEVDEVISIWE-LMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M++SG    A  YNA+I+G   A 
Sbjct: 119 MAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++ F ++  MG   C   +V+YN LI GL +  +  EA  + + + EK  N+   T+ 
Sbjct: 179 KFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI GLC    +  A+Q+ N+V   G                  G++  A SL   ++  
Sbjct: 239 LLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R  ++
Sbjct: 299 NCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDS 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + L K   P +IT
Sbjct: 359 ILFLHDALTKKIVPTIIT 376



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  +                   GR+ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFR------------------VGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + N  + N +M G     +++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWELMGREGSR-NVASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK E   ++   ++    KG   D   YS +INGLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNEYINKSLHVLEMAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
              +YN LI+GL  A K EDA +++  M   +C P +VTYNTL++GL K     +A ++ 
Sbjct: 163 KAHVYNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+     +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++    +  + +   + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDNGEVDEVISIWELMK-NSGFVEDSITYGILVHGFCKNEYINKSLHVLEMA 120

Query: 100 N------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
                  + F   A I  LC++ + +KA   LN + + G KP  + Y  +INGLV +   
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  VF EM        +V YN LI+G  K   +  A ++ + + +E     +V+TY++
Sbjct: 181 EDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEM-LEKGWNSSVITYSL 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I GLC   + +  L++W+++     + D   +   IHGLC  G ++ A  +Y ++    
Sbjct: 240 LIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VT+N +++GF + G I+    +W  + R G   +++SYNI ++GL    ++ ++I
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDSI 359



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E A +  N +  KG KPDV  +  +I+GL   G +  AL+++ ++       N
Sbjct: 244 LCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPN 303

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEM 228
           +V +N L++GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  D  L +
Sbjct: 304 LVTHNTLMEGFYKDGDIRNALVIWAR-ILRNGLQPDIISYNITLKGLCSCNRISDSILFL 362

Query: 229 WDRMKK 234
            D + K
Sbjct: 363 HDALTK 368


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/373 (56%), Positives = 271/373 (72%), Gaps = 17/373 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+EM ES +  DAV YNAM++GF RAG+IK+C ELWE+MGR+   NVV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQNVV 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL  NG VD+AISIWEL+ +     DSTT+G+L++G CKNGY+NK++++L   
Sbjct: 61  SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           EE G                 E +L +A S++N M K+G   NA+  N+L+NGF+  SK 
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++AI +F+EM    CSPTVV+YNTLINGLCK ERF EAY  VKEMLEKGWKP +ITYSLL
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLCQ  K++MAL+L  Q +  G  PDV M NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 MKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDI+SYNITLKGLCSCSR+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAIL 360

Query: 595 FLNDALCRGILPT 607
           FL DAL + I P+
Sbjct: 361 FLQDALAKKIAPS 373



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 195/392 (49%), Gaps = 21/392 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ EM E  V  + V YN +++GFF+ G      E+WE +  E S   NV
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDS--QNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V++N+M+ GL   G  D+ + +W+ M ++   +DS TY   + G CK G +  + RV   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVSYNILIRGLLENGK 325
             E G  +DA  Y+AMI+G C+  K+ E   +   M +  G  N   YN LI G +   K
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+AI ++  +   NC+    T+  LINGLCK                 GE R A+A  L
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCK-----------------GE-RFAEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G K    T + LM G  Q  K+E A+ L+ ++   G  P V   N LI+GLC 
Sbjct: 222 VKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           YNI + GLCS  ++  A+    +   +   P+
Sbjct: 342 YNITLKGLCSCSRISFAILFLQDALAKKIAPS 373



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 21/392 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  ++G +   + ++ E+  R    NV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +NI++ G F  GD  +A  IWE L+ ++    +  TY ++++G CK G  ++ L +  
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWE-LMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLG 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M+++G   +A  YN +I+GF    
Sbjct: 119 IAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   ++  MG   C   VV+YN LI GL +  +  EA  + + + EK       T+ 
Sbjct: 179 KFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC+   +  A+Q+ N+V                    +G K +    N L++G  
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVIS------------------NGLKPDVQMLNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V++NTL+ G  K      A      +L  G +PD++
Sbjct: 281 SVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIV 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           +Y++ + GLC   +I  A+      L K   P
Sbjct: 341 SYNITLKGLCSCSRISFAILFLQDALAKKIAP 372



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 24/357 (6%)

Query: 37  SPHLFHHILRRLIDPKLVVH---------VSRILELIEIQKCYCPED----VALSVI-QA 82
           +  ++  +    + P  VV+           RI + IE+ +    ED    V+ +++ + 
Sbjct: 9   AERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQNVVSFNIMMRG 68

Query: 83  YGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
              N   DKA+ +++ M +         +G      C+     K+ R L    EKG   D
Sbjct: 69  LFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLD 128

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            ++Y  +INGL K   L  A++V + M + G   N   YN LI+GF     +  A  ++ 
Sbjct: 129 AFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVF- 187

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R +  T+  P VVTYN +INGLCK  RF E  ++   M +   +    TY   + GLC+ 
Sbjct: 188 REMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQG 247

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             VE A +++ +++ +G+  D    N +I G C  GK +    L+  M R  C  N+V++
Sbjct: 248 HKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTH 307

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           N L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L +
Sbjct: 308 NTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQD 364


>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 376

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/376 (55%), Positives = 274/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++GF R G+IK+CFELWE+MGR+G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGSRSVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISI EL+++     DS T+G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+A+ + +EM    CSPT+V+Y+TLINGLCKVERFGEAY  VKEMLZKG  P +ITYSLL
Sbjct: 181 EDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++MAL+L  Q   KGF PDV M+NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 MKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K  D   AL IW  IL   L+PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+PT IT
Sbjct: 361 FLHDAVTKKIVPTIIT 376



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++GFF+ G      E+WE +  E S   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGS--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + + + MKK+   +DS TY   +HG CK G +  +  V   
Sbjct: 60  ASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+  K+ +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++A+ +   +   NC+    T+  LINGLCK             VE     R  +A  L
Sbjct: 180 FEDAVRVVREMGTTNCSPTLVTYSTLINGLCK-------------VE-----RFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L  +++ KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  VP ++T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVPTIIT 376



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  + G +     ++ EM  R    +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELW-EMMGREGSRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       I E L+ ++    + +TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFDNGKVDEVISILE-LMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M++SG   +A  YNA+I+G   A 
Sbjct: 119 IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +   MG   C   +V+Y+ LI GL +  +  EA  + + + ZK  N    T+ 
Sbjct: 179 KFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC    +  A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 LLMKGLCLGHKVEMALQLXNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V++NTL+ G  K +    A      +L  G +PD+I
Sbjct: 281 SVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I  A+      + K   P +
Sbjct: 341 SYNITLKGLCSCNRISDAILFLHDAVTKKIVPTI 374



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 149/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  +                   GR+ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFR------------------VGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + +  + N +M G     K++  I + + M + G     ++Y  L++
Sbjct: 44  CFELWEMMGREGSR-SVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++    KG   D   YS +INGLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA+++   M   NC P LVTY+TL++GL K     +A ++ 
Sbjct: 163 NAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LZ+ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  ILEL++ +  +  + +   + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISILELMK-KSGFIEDSITYGILVHGFCKNGYINKSLHVLEIA 120

Query: 100 N------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
                  + F   A I  LC++ + +KA   LN + + G KP+ + Y  +INGLV +   
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ V  EM        +V Y+ LI+G  K   +  A ++ + + +Z  + P+V+TY++
Sbjct: 181 EDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEM-LZKGLNPSVITYSL 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ GLC   + +  L++ +++     + D   +   IHGLC  G  + A  +Y +M    
Sbjct: 240 LMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VT+N +++GF +   I+    +W  + R G   +++SYNI ++GL    ++ +AI
Sbjct: 300 CAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAI 359



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A   +  + ZKGL P V +Y  ++ GL     +  AL + +++  +G + +
Sbjct: 209 LCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +    +  PN+VT+N ++ G  K       L +W
Sbjct: 269 VQMHNILIHGLCSVGKTQLALLLYLDM-NRWNCAPNLVTHNTLMEGFYKDDDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  + D  +Y   + GLC    +  A     + V   I    +T
Sbjct: 328 ARILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTIIT 376


>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 376

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/376 (55%), Positives = 272/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAE VY+++VES + +DAV YN M++GF R G+IK+CFELWE+MG++G  NV 
Sbjct: 1   CESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSRNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL  NGKVDE I IWEL+++     DS T+G+L++G CKNG +NK++ +L   
Sbjct: 61  SFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 + +L  A S++N M K GCK NA+  N+L+NG + +SK 
Sbjct: 121 EMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK ERFGEAY  VKEMLEKGW P +ITYS+L
Sbjct: 181 EDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC   K++MAL+L  Q   KGF PD+ M+NILIHGLCS GK++ AL LY +M   NC
Sbjct: 241 IKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DAL + I+PT IT
Sbjct: 361 FLHDALTKKIVPTIIT 376



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 204/395 (51%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ ++ E  +  + V YN +++GFF+ G      E+WE +  E S   NV
Sbjct: 2   ESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGS--RNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK+   +DS TY   +HG CK G+V  +  V   
Sbjct: 60  ASFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+  K+ +   +   M + GC  N   YN LI GL+ + K
Sbjct: 120 AEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI +++ +   +C+    T+  LINGLCK                 GE R  +A  L
Sbjct: 180 FEDAIRVFQEMGSTHCSPTIITYNTLINGLCK-----------------GE-RFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G      T + L+ G     K+E A+ L+ +++ KG  P +  +N LI+GLC 
Sbjct: 222 VKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T++ L+ G  +   +  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++  A+    +   +  VP ++T
Sbjct: 342 YNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+     + E  L  D   Y T++NG  + G +     +++ M + G   NV
Sbjct: 1   CESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEG-SRNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFNNGKVDEVILIWE-LMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D+F Y + I+GLCK   ++ A  V   M++SG   +A  YNA+I+G   + 
Sbjct: 119 IAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +++ MG   C   +++YN LI GL +  +  EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI GLC    +  A+Q+  +V   G                  G++  A SL   M+  
Sbjct: 239 MLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R   A
Sbjct: 299 NCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + L K   P +IT
Sbjct: 359 ILFLHDALTKKIVPTIIT 376



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L +   V  V  I EL++ +  +  + +   + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFNNGKVDEVILIWELMK-KSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIA 120

Query: 100 N------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
                  + F   A I  LC+  + +KA   LN + + G KP+ + Y  +INGLV S   
Sbjct: 121 EMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ VF EM        ++ YN LI+G  K   +  A ++ + + +E    P V+TY++
Sbjct: 181 EDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEM-LEKGWNPCVITYSM 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I GLC C + +  L++W ++     + D   +   IHGLC  G ++ A  +Y +M    
Sbjct: 240 LIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VT+N +++GF + G ++    +W  + R G   +++SYNI ++GL    ++  AI
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAI 359


>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 376

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/376 (55%), Positives = 272/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++ A+ VY+E+VES +  DAV YNAM++GF + G+IK+CFELWE+MG++G  NV 
Sbjct: 1   CESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGRNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKV+E ISIWEL+++     DS T+G+L++GLCKNG +NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 + +L  A S++N M K GC  NA+  N+L+NG + ASK 
Sbjct: 121 EVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK ERFGEAY  VKEMLEKGW P +ITYSLL
Sbjct: 181 EDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC  +K++MAL L  Q + KGF PDV M+NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 IKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL  W  IL   ++PDIISYNITLKGLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCNRISGAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DAL + I PT IT
Sbjct: 361 FLHDALTKKIFPTIIT 376



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+  A  V+ E+ E  V  + V YN +++GFFK G      E+WE +  E     NV
Sbjct: 2   ESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGG--RNV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ +E + +W+ MKK+   +DS TY   +HGLCK G++  +  +   
Sbjct: 60  ASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+  C+  K+ +   +   M + GC+ N   YN LI GL+   K
Sbjct: 120 AEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI +++ +   +C+    T+  LINGLCK                    R  +A  L
Sbjct: 180 FEDAIRVFQEMGNTHCSPTIITYNTLINGLCK------------------AERFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G      T + L+ G     K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T++ L+ G  +   I  AL    + L+ G  PD+  
Sbjct: 282 VGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++  A+    +   +   P ++T
Sbjct: 342 YNITLKGLCSCNRISGAILFLHDALTKKIFPTIIT 376



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + AK     + E  + PD   Y  ++NG  K G +     +++ M + G   NV
Sbjct: 1   CESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEG-GRNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++GLCK G  ++ L M +
Sbjct: 60  ASFNIMMRGLFDNGKVNEVISIWE-LMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D+F Y + I+ LCK   ++ A  V   M++ G   +A  YNA+I+G   A 
Sbjct: 119 IAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +++ MG   C   +++YN LI GL +  +  EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI GLC    +  A+ + N+V              +N+    G K +    N L++G  
Sbjct: 239 LLIKGLCLGRKVEMALHLWNQV--------------INK----GFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V++NTL+ G  K      A +    +L  G +PD+I
Sbjct: 281 SVGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I  A+      L K   P +
Sbjct: 341 SYNITLKGLCSCNRISGAILFLHDALTKKIFPTI 374



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  K                   GR+ D
Sbjct: 2   ESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFK------------------VGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M K G + N  + N +M G     K+   I +++ M + G     ++Y  L++
Sbjct: 44  CFELWELMGKEGGR-NVASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLCK     ++   ++    KG   D   YS +IN LC+  K+D A+ +    ++ G  P
Sbjct: 103 GLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A ++ 
Sbjct: 163 NAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+   P +I+Y++ +KGLC   ++  A    N  + +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 14/301 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYG--KNSMPDKALDVFQR 98
           F+ ++R L D   V  V  I EL+  +K    ED     I  +G  KN   +K+L + + 
Sbjct: 62  FNIMMRGLFDNGKVNEVISIWELM--KKSGFVEDSITYGILVHGLCKNGDINKSLHMLEI 119

Query: 99  MN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                   + F   A I  LC+  + +KA   LN + + G  P+ + Y  +INGLV +  
Sbjct: 120 AEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASK 179

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
              A+ VF EM        ++ YN LI+G  K   +  A ++ + + +E    P V+TY+
Sbjct: 180 FEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEM-LEKGWNPCVITYS 238

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++I GLC   + +  L +W+++     + D   +   IHGLC  G  + A  +Y +M   
Sbjct: 239 LLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRW 298

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
               + VT+N +++GF + G I+     W  + R G   +++SYNI ++GL    ++  A
Sbjct: 299 NCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCNRISGA 358

Query: 330 I 330
           I
Sbjct: 359 I 359



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 12/238 (5%)

Query: 50  DPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI 109
           D KL   VS +  +I+   C     V  ++I      S  + A+ VFQ M     C   I
Sbjct: 142 DSKLDKAVSVLNGMIK-XGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTH-CSPTI 199

Query: 110 ---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                    LC+  +F +A   +  + EKG  P V +Y  +I GL     +  AL ++++
Sbjct: 200 ITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQ 259

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +  +G + +V  +NILI G    G    A  ++  +    +  PN+VT+N ++ G  K G
Sbjct: 260 VINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDM-NRWNCAPNLVTHNTLMZGFYKDG 318

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
                L  W R+ +N  + D  +Y   + GLC    + GA     + +   IF   +T
Sbjct: 319 DIRNALATWARILRNGVQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIFPTIIT 376


>gi|255661024|gb|ACU25681.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 376

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/376 (54%), Positives = 267/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C+ G++ GAERVY+EMVE  +  DAV YN M++GF R+ +IK+CFELW++MGR+G   V 
Sbjct: 1   CELGDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSRTVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDEA+SIWEL++E     DSTT+G+L++G CKNG+ NK++ +L   
Sbjct: 61  SFNIIMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E +L  A S++N M  +GCK NA+  NSL+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKY 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI  F+EM    CSPT+V+YN LINGLCK ER+ EAY  VK+MLEKG+ P +ITYS L
Sbjct: 181 EDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
             GLCQ +K++MAL+L  + + KGF PDV M+NILIHGLC+ GK+E AL LY  M +  C
Sbjct: 241 FKGLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIELALALYFGMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT NTLM+G +K GD    L IW  IL   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 301 SPNLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNITLKGLCSCNRISGAVL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DAL + I PT IT
Sbjct: 361 FLHDALGKNIFPTVIT 376



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 198/393 (50%), Gaps = 21/393 (5%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD+ GA  V+ EM ER V  + V YN +++GFF+        E+W+ +  E S    V +
Sbjct: 4   GDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGS--RTVAS 61

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           +N+++ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G+   +  V     
Sbjct: 62  FNIIMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAE 121

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
           + G  +DA  Y+AMI+G C+  K+ +   +   M   GC  N   YN LI GL+   K +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYE 181

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +AI  ++ +   +C+    T+  LINGLCK                 GE R A+A  LV 
Sbjct: 182 DAICAFQEMGNMDCSPTIVTYNXLINGLCK-----------------GE-RYAEAYDLVK 223

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +M + G   +  T +SL  G  Q  K+E A+ L+K++  KG  P V  +N LI+GLC V 
Sbjct: 224 QMLEKGFNPSVITYSSLFKGLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVG 283

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A +    M      P+++T + L+ G  +   +   L +  + L+    PD+  YN
Sbjct: 284 KIELALALYFGMNRWKCSPNLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYN 343

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           I + GLCS  ++  A+    +   +N  P ++T
Sbjct: 344 ITLKGLCSCNRISGAVLFLHDALGKNIFPTVIT 376



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 182/394 (46%), Gaps = 21/394 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C       A+R    + E+ + PD   Y T++NG  +S  +     ++D M   G  T V
Sbjct: 1   CELGDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSRT-V 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G    A  IWE L+ E+    +  TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIIMRGLFDNGKVDEAVSIWE-LMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M  +G   +A  YN++I+G   A 
Sbjct: 119 IAEQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++    ++ MG   C   +V+YN LI GL +  +  EA  + + + EK  N    T+ 
Sbjct: 179 KYEDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L  GLC+   +  A+Q+  +V                     G K +    N L++G  
Sbjct: 239 SLFKGLCQGRKVEMALQLWKKVIS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K+E A+ L+  M+R  CSP +V+ NTL+ G  K             +L    KPD+I
Sbjct: 281 NVGKIELALALYFGMNRWKCSPNLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +Y++ + GLC   +I  A+      L K   P V
Sbjct: 341 SYNITLKGLCSCNRISGAVLFLHDALGKNIFPTV 374



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E G +  A  +++ + E+  + D+  +  ++NG  ++                   R+ D
Sbjct: 2   ELGDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQ------------------RIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L + M + G +  A + N +M G     K++ A+ +++ M   G      +Y  L++
Sbjct: 44  CFELWDLMGREGSRTVA-SFNIIMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+  K+D A+ +       G  P
Sbjct: 103 GFCKNGHNNKSLHVLEIAEQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA+  +  M   +C P +VTYN L++GL K     +A ++ 
Sbjct: 163 NAHVYNSLINGLVGASKYEDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+   P +I+Y+   KGLC   ++  A +     + +G  P     +IL+  + N 
Sbjct: 223 KQMLEKGFNPSVITYSSLFKGLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 12/302 (3%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++    N   D+A+ +++ M E         +G      C+     K+   L    +KG
Sbjct: 65  IMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAEQKG 124

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
              D ++Y  +INGL K   L  A++V + M   G + N   YN LI+G      Y  A 
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYEDAI 184

Query: 191 EIWERLV-METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ +  M+ S  P +VTYN +INGLCK  R+ E  ++  +M +        TY S   
Sbjct: 185 CAFQEMGNMDCS--PTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSLFK 242

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLC+   VE A +++++++  G   D   +N +I G C  GKI+    L+  M R  C  
Sbjct: 243 GLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIELALALYFGMNRWKCSP 302

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N+V+ N L+ G  ++G V   + IW  +       D  ++ + + GLC    ++ A+  L
Sbjct: 303 NLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNITLKGLCSCNRISGAVLFL 362

Query: 369 NE 370
           ++
Sbjct: 363 HD 364


>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 376

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/376 (54%), Positives = 273/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+++V+S +  DAV YNAM++GF RAG+IK+CFELWE+MG++G  +V 
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRSVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NG+VDE  SIWEL+++     DS T+G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIX 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M + GCK N +  N+L+NG I ASK 
Sbjct: 121 ERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKS 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+V+Y+ LINGLCK ERF EAY  VKEMLEKG  P +ITYSLL
Sbjct: 181 EDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++MAL+L  Q  +KGF PDV M+NILIHGLCS  K + AL LY +M + NC
Sbjct: 241 MKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL +W  IL+  L+PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 SPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I PT IT
Sbjct: 361 FLHDAVRKKIFPTKIT 376



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ ++ +  V  + V YN +++GF++ G      E+WE +  E S   +V
Sbjct: 2   ESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGS--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   GR DE   +W+ MKK    +DS TY   +HG CK G +  +  +   
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G   DA+ Y  MI+G C+  K+++   +   M + GC  N   YN LI GL+   K
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+ +LINGLCK+                   R ++A  L
Sbjct: 180 SEDAIRVFREMGFPHCSPTIVTYSILINGLCKS------------------ERFSEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++++KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T++ L+ G  +   I  AL +  + L+    PD+  
Sbjct: 282 VAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +  ++   P  +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVRKKIFPTKIT 376



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 191/392 (48%), Gaps = 21/392 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + +  + PD   Y  ++NG  ++G +     +++ M + G  + V
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRS-V 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ +     + +TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWE-LMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++  R  D+  Y   I+GLCK   +E A  V   M++SG   +   YNA+I+G   A 
Sbjct: 119 IXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +V+Y+ILI GL ++ +  EA  + + + EK       T+ 
Sbjct: 179 KSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC    +  A+Q+ N+V                   K G K +    N L++G  
Sbjct: 239 LLMKGLCLGHKVEMALQLWNQVT------------------KKGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
             +K ++A+ L+ +M+R  CSP +V++NTL+ G  K      A      +L+   +PD+I
Sbjct: 281 SVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           +Y++ + GLC   +I  A+      ++K   P
Sbjct: 341 SYNITLKGLCSCNRISDAILFLHDAVRKKIFP 372



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQ-- 97
           F+ ++R L D   V  V+ I EL++ +  Y  + +   + +  + KN   +K+L + +  
Sbjct: 62  FNIMMRGLFDNGRVDEVNSIWELMK-KGGYVEDSITYGILVHGFCKNGYINKSLHLLEIX 120

Query: 98  ----RMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
               R  +       I  LC++ + EKA   LN + + G KP+ + Y  +INGL+ +   
Sbjct: 121 ERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKS 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ VF EM        +V Y+ILI+G  K   +  A ++ + + +E  + P+V+TY++
Sbjct: 181 EDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEM-LEKGLTPSVITYSL 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ GLC   + +  L++W+++ K   + D   +   IHGLC     + A  +Y +M    
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWN 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
              + VT+N +++GF + G I+    +W  ++  +   +++SYNI ++GL    ++ +AI
Sbjct: 300 CSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAI 359



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 13/237 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E     A+++ +    + G   + H+++ ++  LI         R+   +   
Sbjct: 135 MINGLCKETKLEKAVSVLNGMI-QSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFP 193

Query: 68  KCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEK 118
            C  P  V  S+ I    K+    +A D+ + M E         +      LC   + E 
Sbjct: 194 HC-SPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEM 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N + +KG KPDV  +  +I+GL        AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKK 234
           GF+K GD   A  +W R +++  + P++++YN+ + GLC C R  D  L + D ++K
Sbjct: 313 GFYKDGDIRNALVMWAR-ILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRK 368



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A   +  + EKGL P V +Y  ++ GL     +  AL +++++ ++G + +
Sbjct: 209 LCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G         A  ++  +    +  PN+VT+N ++ G  K G     L MW
Sbjct: 269 VQMHNILIHGLCSVAKTQHALSLYLDM-NRWNCSPNLVTHNTLMEGFYKDGDIRNALVMW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ KNE + D  +Y   + GLC    +  A     + V   IF   +T
Sbjct: 328 ARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKIFPTKIT 376



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 5/182 (2%)

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+      A    K++++    PD + Y+ ++NG  ++ +I    +L  + + K  +  V
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGKEGSRSV 59

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             +NI++ GL   G+V++   ++  MKK   V + +TY  L+ G  K G  +K+L +   
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLL-E 118

Query: 564 ILEERLR-PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I E + R  D ++Y   + GLC  +++  A   LN  +  G  P T  ++ L+  ++  G
Sbjct: 119 IXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLI--G 176

Query: 623 AS 624
           AS
Sbjct: 177 AS 178


>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 376

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/376 (54%), Positives = 270/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL + GKVDE ISIWEL+++ +   DS T+G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY  VKEMLEKG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q + KGF PDV M+NILIHGLCS GK + AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  +L   L PDIISYNITLKGLCSC+R+ DA  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+PT IT
Sbjct: 361 FLHDAVRKKIVPTKIT 376



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK++  +DS TY   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   + +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +    C+    T+  LINGLCKN             E  GE     A  L
Sbjct: 180 FEDAIRVFREMGTVRCSPTIITYNTLINGLCKN-------------EMFGE-----AYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +  ++  VP  +T
Sbjct: 342 YNITLKGLCSCNRICDAILFLHDAVRKKIVPTKIT 376



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F KG       IWE L+ ++    + +TY ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWE-LMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V  +M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+ GLC +  + +A+Q+ N+V   G                  G+   A SL   M++ 
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R  +A
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + + K   P  IT
Sbjct: 359 ILFLHDAVRKKIVPTKIT 376



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M +       ++Y  L++
Sbjct: 44  CFELWEMMGNEGNR-SVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M    C P ++TYNTL++GL K     +A ++ 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+ L P +I+Y++ +KGLC   ++  A +  N  + +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 11/236 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDKAVSVLNDMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTV 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           +C        ++I    KN M  +A D+ + M E         +      LC   + E+A
Sbjct: 194 RCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERA 253

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            +  N +  KG KPDV  +  +I+GL   G    AL+++ +M       N+V +N L++G
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEG 313

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKK 234
           F+K GD   A  IW R V+   + P++++YN+ + GLC C R  D  L + D ++K
Sbjct: 314 FYKDGDIRNALVIWAR-VLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDKGKVDEVISIWELMK-KSDFVEDSITYGILVHGFCKNGYINKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   +KA   LN + + G KP+ + Y T+INGLV +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 152 LGALAVF-----------------------------------DEMFERGVETNVVCYNIL 176
             A+ VF                                    EM E+G+  +V+ Y++L
Sbjct: 181 EDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W +++                         +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+VT+N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I    +T
Sbjct: 361 FLHDAVRKKIVPTKIT 376


>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 376

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/376 (54%), Positives = 271/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG   ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q + KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+PT IT
Sbjct: 361 FLHDAVTKKIVPTKIT 376



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL    K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  VP  +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVPTKIT 376



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 183/378 (48%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+ GLC +  + +A+Q+ N+V   G                  G++  A SL   M++ 
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  + N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R  +A
Sbjct: 299 KCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + + K   P  IT
Sbjct: 359 ILFLHDAVTKKIVPTKIT 376



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N  + +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL+V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ +++  G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL++ +   +  G   + H+++ ++  L          R+   +   
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKS-GCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALMIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGL  +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W +++                         +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I    +T
Sbjct: 361 FLHDAVTKKIVPTKIT 376


>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 376

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 272/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+++VES +  DAV YNAM++GF RAG++K+CFELWE+MGR+G  +V 
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +N KV+EA+SIWEL+ +     DS T+G+L++G CKNGY+NK++ IL   
Sbjct: 61  SFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E +L  A S++N M + GCK N +  N+L+ G I ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKR 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++A+ +F+EM    C P + +Y+ LI+GLCK ERFGEAY  VKEMLEKG  P +ITYSLL
Sbjct: 181 DDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++MAL+L  Q  +KGF PDV M+NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 MKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT NTLM+G +K G+   AL IW  IL+  L+PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIW 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+PT IT
Sbjct: 361 FLHDAVRKKIIPTKIT 376



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 203/395 (51%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ ++ E  V  + V YN +++GF++ G      E+WE +  E S   +V
Sbjct: 2   ESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGS--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL    + +E + +W+ M K+   +DS TY   +HG CK G +  +  +   
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+  C+  K+++   +   M R GC  N   YN LI+GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+A+ I+  +   +C  +  T+ +LI+GLCK                 GE R  +A  L
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGLCK-----------------GE-RFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++++KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T + L+ G  +   +  AL +  + L+    PD+  
Sbjct: 282 VGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +  ++  +P  +T
Sbjct: 342 YNITLKGLCSCNRISDAIWFLHDAVRKKIIPTKIT 376



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 21/392 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  ++G +     ++ EM  R    +V
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELW-EMMGREGSRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F       A  IWE L+ ++    + VTY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWE-LMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+ LCK   +E A  V   M+ SG   +   YNA+I G   A 
Sbjct: 119 IAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   ++  MG   C  N+ +Y+ILI GL +  +  EA  + + + EK  N    T+ 
Sbjct: 179 KRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC    +  A+Q+ N+V                   K G K +    N L++G  
Sbjct: 239 LLMKGLCLGHKVEMALQLWNQVT------------------KKGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V+ NTL+ G  K      A      +L+   +PD+I
Sbjct: 281 SVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           +Y++ + GLC   +I  A+      ++K   P
Sbjct: 341 SYNITLKGLCSCNRISDAIWFLHDAVRKKIIP 372



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 151/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  +                   GR+ D
Sbjct: 2   ESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYR------------------AGRMKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + +  + N +M G     K+E A+ +++ M++ G     V+Y  L++
Sbjct: 44  CFELWEMMGREGSR-SVASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +IN LC+  K++ A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI GL  A K +DA++++  M   +C PN+ TY+ L+DGL K     +A ++ 
Sbjct: 163 NTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 147/323 (45%), Gaps = 20/323 (6%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+ E+A      + + G   D  +YG +++G  K+G +  +L + +   ++G   +   Y
Sbjct: 73  RKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAY 132

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           + +I+   K+    +A  +   ++  +   PN   YN +I GL    + D+ + ++  M 
Sbjct: 133 SAMINALCKESKLEKAVSVLNGMI-RSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMG 191

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
             +   +  TY   I GLCK      A  + +EM+E G+    +TY+ ++ G C   K++
Sbjct: 192 TTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVE 251

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
              +LW  + +KG   +V  +NILI GL   GK   A+S++  +   NC  +  T   L+
Sbjct: 252 MALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLM 311

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            G  K+G +  A+ I                    R+ K+  + +  + N  + G    +
Sbjct: 312 EGFYKDGNVRNALVIW------------------ARILKNELQPDIISYNITLKGLCSCN 353

Query: 413 KLENAIFLFKEMSRKGCSPTVVS 435
           ++ +AI+   +  RK   PT ++
Sbjct: 354 RISDAIWFLHDAVRKKIIPTKIT 376



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E     A+++ +   R  G   + H+++ +++ LI         RI    E+ 
Sbjct: 135 MINALCKESKLEKAVSVLNGMIRS-GCKPNTHVYNALIKGLIGASKRDDAVRIFR--EMG 191

Query: 68  KCYCPEDVALSVIQAYG--KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
              CP ++A   I   G  K     +A D+ + M E         +      LC   + E
Sbjct: 192 TTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVE 251

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            A +  N + +KG KPDV  +  +I+GL   G    AL+++ +M       N+V  N L+
Sbjct: 252 MALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLM 311

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           +GF+K G+   A  IW R +++  + P++++YN+ + GLC C R  + +
Sbjct: 312 EGFYKDGNVRNALVIWAR-ILKNELQPDIISYNITLKGLCSCNRISDAI 359


>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 369

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/366 (56%), Positives = 266/366 (72%), Gaps = 17/366 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+++V+S +  DAV YNAM++GF RAG+IK+CFELWE+MGR+G  +V 
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NG+VDE  SIWEL+++     DS T+G+L++G CKNGY+NK++++L   
Sbjct: 61  SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K GCK N +  N+L+NG I ASK 
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKS 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+V+YN LINGLCK ERFGEAY  VKEMLEKG  P +ITYSLL
Sbjct: 181 EDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   KI+MAL+L  Q  + GF PDV M+N LIHGLCS GK + AL LY +M   NC
Sbjct: 241 MKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT NTLM+G +K GD   AL IW  IL+  L+PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDAL 600
           FLNDA+
Sbjct: 361 FLNDAV 366



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 195/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ ++ +  V  + V YN +++GF++ G      E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   GR DE   +W+ MKK    +DS TY   +HG CK G +  + RV   
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+  K+++   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+ +LINGLCK+                   R  +A  L
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKS------------------ERFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++++ G  P V  +NTLI+GLC 
Sbjct: 222 VKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T + L+ G  +   +  AL +  + L+    PD+  
Sbjct: 282 VGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 342 YNITLKGLCSCNRISDAI 359



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 21/379 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + +  + PD   Y  ++NG  ++G +     ++ EM  R    +V
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGREGNRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ +     + +TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWE-LMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   +E A  V   M++SG   +   YNA+I+G   A 
Sbjct: 119 TAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +V+YNILI GL ++ +  EA  + + + EK       T+ 
Sbjct: 179 KSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC    +  A+Q+ N+V                   K+G K +    N+L++G  
Sbjct: 239 LLMKGLCLGHKIEMALQLWNQVT------------------KNGFKPDVQMHNTLIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+   C+P +V+ NTL+ G  K      A      +L+   +PD+I
Sbjct: 281 SVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDII 340

Query: 470 TYSLLINGLCQSKKIDMAL 488
           +Y++ + GLC   +I  A+
Sbjct: 341 SYNITLKGLCSCNRISDAI 359



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 2/262 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+     K+ R L +   KG   D ++Y  +INGL K   L  A++V + M + G + N
Sbjct: 104 FCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI+G         A  ++  + + T   P +VTYN++INGLCK  RF E  ++ 
Sbjct: 164 THVYNALINGLIGASKSEDAIRVFREMGI-THCSPTIVTYNILINGLCKSERFGEAYDLV 222

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +        TY   + GLC    +E A +++ ++ ++G   D   +N +I G C  
Sbjct: 223 KEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSV 282

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK +    L+  M    C  N+V+ N L+ G  ++G +  A+ IW  + +     D  ++
Sbjct: 283 GKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISY 342

Query: 349 GVLINGLCKNGYLNKAIQILNE 370
            + + GLC    ++ AI  LN+
Sbjct: 343 NITLKGLCSCNRISDAILFLND 364



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E     A+++ +   +  G   + H+++ ++  LI         R+   + I 
Sbjct: 135 MINGLCKETKLEKAISVLNGMIKS-GCKPNTHVYNALINGLIGASKSEDAIRVFREMGIT 193

Query: 68  KCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEK 118
            C  P  V  ++ I    K+    +A D+ + M E         +      LC   + E 
Sbjct: 194 HC-SPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEM 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N + + G KPDV  + T+I+GL   G    AL+++ +M       N+V  N L++
Sbjct: 253 ALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKK 234
           GF+K GD   A  IW R +++  + P++++YN+ + GLC C R  D  L + D ++K
Sbjct: 313 GFYKDGDMRNALVIWAR-ILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRK 368



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 3/181 (1%)

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+      A    K++++    PD + Y+ ++NG  ++ +I    +L     ++G    V
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSV 59

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             +NI++ GL   G+V++   ++  MKK   V + +TY  L+ G  K G  +K+L +   
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
              +    D  +Y+  + GLC  +++  A   LN  +  G  P T  ++ L+  ++  GA
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLI--GA 177

Query: 624 S 624
           S
Sbjct: 178 S 178


>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 376

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/376 (54%), Positives = 270/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C+ G+++GA+RVY+E+VES +  DAV YNAM++GF R  +IK+CF+LWE+MGR+G  +V 
Sbjct: 1   CEIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGSRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +N KVDE ISIWEL++E     DS T+G+L++G CKNGYLNK++ +L   
Sbjct: 61  SFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI + +EM     SPTVV+Y+TLINGLCK ERFGEAY  VKEML+KG  P +ITYSLL
Sbjct: 181 EDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC   K++ A +L  Q + KGF PDV M+NI+IHGLCS GK++ AL LY NM + +C
Sbjct: 241 IKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYFNMNRWDC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  I+   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDIISYNITLKGLCSCNRISGAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+C+ I+ T IT
Sbjct: 361 FLHDAVCKKIVLTVIT 376



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 21/393 (5%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD+ GA  V+ E+ E  V  + V YN +++GFF+        ++WE +  E S   +V +
Sbjct: 4   GDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGS--RSVSS 61

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           +N+M+ GL    + DE + +W+ MK++   +DS TY   +HG CK G +  +  V     
Sbjct: 62  FNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIAE 121

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             G  +DA  Y+AMI+G C+  K+ +   +   M + GC  N   YN LI GL+   K +
Sbjct: 122 RKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFE 181

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +AI +   +   + +    T+  LINGLCK                 GE R  +A  LV 
Sbjct: 182 DAIRVLREMGTTHFSPTVVTYSTLINGLCK-----------------GE-RFGEAYDLVK 223

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M   G   +  T + L+ G     K+E A  L+ ++  KG  P V  +N +I+GLC V 
Sbjct: 224 EMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVG 283

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A S    M      P+++T++ L+ G  +      AL +  + ++ G  PD+  YN
Sbjct: 284 KMQLALSLYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDIISYN 343

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           I + GLCS  ++  A+    +   +  V  ++T
Sbjct: 344 ITLKGLCSCNRISGAILFLHDAVCKKIVLTVIT 376



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 182/379 (48%), Gaps = 21/379 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + AKR    + E  + PD   Y  ++NG  +   +     +++ M   G  + V
Sbjct: 1   CEIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGSRS-V 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F          IWE L+ E+    + +TY ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDNAKVDEVISIWE-LMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M++SG   +A  YNA+I+G   A 
Sbjct: 119 IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGAS 178

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +   MG       VV+Y+ LI GL +  +  EA  + + + +K  N    T+ 
Sbjct: 179 KFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI GLC +  + KA Q+ N+V                     G K +    N +++G  
Sbjct: 239 LLIKGLCLDCKVEKAFQLWNQVIS------------------KGFKPDVQMHNIMIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+  M+R  C+P +V++NTL+ G  K   F  A      ++  G +PD+I
Sbjct: 281 SVGKMQLALSLYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDII 340

Query: 470 TYSLLINGLCQSKKIDMAL 488
           +Y++ + GLC   +I  A+
Sbjct: 341 SYNITLKGLCSCNRISGAI 359



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E G +D A  +++ + E   + D+  +  ++NG  +                    R+ D
Sbjct: 2   EIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFR------------------VRRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + +  + N +M G    +K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFKLWELMGREGSR-SVSSFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++    KG   D   YS +INGLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNGYLNKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA+++   M   +  P +VTY+TL++GL K     +A ++ 
Sbjct: 163 NAHVYNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  AF+  N  + +G  P     +I++  + + 
Sbjct: 223 KEMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 153/306 (50%), Gaps = 12/306 (3%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKAL 93
           + S   F+ ++R L D   V  V  I EL++ +  Y  + +   + +  + KN   +K+L
Sbjct: 56  SRSVSSFNIMMRGLFDNAKVDEVISIWELMK-ESGYVEDSITYGILVHGFCKNGYLNKSL 114

Query: 94  DVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            V +         + F   A I  LC++ + +KA   LN + + G KP+ + Y  +INGL
Sbjct: 115 HVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGL 174

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           V +     A+ V  EM        VV Y+ LI+G  K   +  A ++ + + ++  + P+
Sbjct: 175 VGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEM-LDKGLNPS 233

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           V+TY+++I GLC   + ++  ++W+++     + D   +   IHGLC  G ++ A  +Y 
Sbjct: 234 VITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYF 293

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
            M       + VT+N +++GF + G  +    +W  + R G   +++SYNI ++GL    
Sbjct: 294 NMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDIISYNITLKGLCSCN 353

Query: 325 KVDEAI 330
           ++  AI
Sbjct: 354 RISGAI 359



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A   +  + +KGL P V +Y  +I GL     +  A  +++++  +G + +
Sbjct: 209 LCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NI+I G    G    A  ++  +       PN+VT+N ++ G  K G F   L +W
Sbjct: 269 VQMHNIMIHGLCSVGKMQLALSLYFNM-NRWDCAPNLVTHNTLMEGFYKDGDFRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  + D  +Y   + GLC    + GA     + V   I +  +T
Sbjct: 328 ARIMRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVCKKIVLTVIT 376


>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 376

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/376 (53%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL+++     DS T G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E     A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVAKKIVLTKIT 376



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  +  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK+   +DS T+   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+     +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCK     +A  ++ E+              
Sbjct: 180 FEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVAKKIVLTKIT 376



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 21/379 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    +  T+ ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N + A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +     EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVRMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMAL 488
           +Y++ + GLC   +I  A+
Sbjct: 341 SYNITLKGLCSCNRISDAI 359



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 12/300 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  +     + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-KSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++  F+KA   LN + + G KP+ + Y T+INGLV +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKF 180

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ VF EM        ++ YN LI+G  KK  +  A  + + L ++  + P V+TY++
Sbjct: 181 EDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKEL-LDKGLNPGVITYSM 239

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ GLC   + +  L++W+++     + D   +   IHGLC  G ++ A  +Y +M    
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + V++N +++GF + G I+    +W  + R G   +++SYNI ++GL    ++ +AI
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKMSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M + G      ++  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+    D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL +A K EDA+ ++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+K  F +A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 209 LCKKEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VRMHNILIHGLCSVGKMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVAKKIVLTKIT 376


>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 376

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 271/376 (72%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL+++     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           ++ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 QQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK+   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  N   YN LI GL+   K
Sbjct: 120 AQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 193/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + KA+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVEKALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M + G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 4/263 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    +K+   L    +KG   D ++Y  +INGL K  +L  A++V + M + G + N
Sbjct: 104 FCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
              YN LI+G      +  A  ++  +  M  S  P ++TYN +INGLCK   F E   +
Sbjct: 164 AHVYNTLINGLVGASKFEDAIRVFREMGTMHCS--PTIITYNTLINGLCKNEMFGEAYNL 221

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +          TY   + GLC    VE A +++ ++   G   D   +N +I G C 
Sbjct: 222 VKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            GK++    L+  M R  C  N+VS+N L+ G  ++G +  A+ IW  +       D  +
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 348 HGVLINGLCKNGYLNKAIQILNE 370
           + + + GLC    ++ AI  L++
Sbjct: 342 YNITLKGLCSCNRISDAILFLHD 364



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G   G+         LC   + EK
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKVEK 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F +A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGKMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 376

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 267/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YN M++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL + GKVDE ISIWEL+++ +   DS T+G+L++G CKNG +NK++ +L   
Sbjct: 61  SFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY  VKEMLEKG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q + KGF PDV M+NILIHGLCS GK + AL LY  M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  +L   L PDIISYNITLKGLCSC+R+ DA  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+D++ + I+PT IT
Sbjct: 361 FLHDSVRKKIVPTKIT 376



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK++  +DS TY   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   + +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN             E  GE     A  L
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKN-------------EMFGE-----AYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S    M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +  ++  VP  +T
Sbjct: 342 YNITLKGLCSCNRICDAILFLHDSVRKKIVPTKIT 376



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y T++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDXGKVDEVISIWE-LMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V  +M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+ GLC +  + +A+Q+ N+V   G                  G+   A SL   M++ 
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R  +A
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + + K   P  IT
Sbjct: 359 ILFLHDSVRKKIVPTKIT 376



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNTMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M +       ++Y  L++
Sbjct: 44  CFELWEMMGNEGNR-SVSSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A ++ 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+ L P +I+Y++ +KGLC   ++  A +  N  + +G  P     +IL+  + + 
Sbjct: 223 KEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 15/238 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+    E+ 
Sbjct: 135 MINGLCKEANLDKAVSVLNDMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFR--EMG 191

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
             +C   +    ++I    KN M  +A D+ + M E         +      LC   + E
Sbjct: 192 TVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVE 251

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A +  N +  KG KPDV  +  +I+GL   G    AL+++  M       N+V +N L+
Sbjct: 252 RALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLM 311

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKK 234
           +GF+K GD   A  IW R V+   + P++++YN+ + GLC C R  D  L + D ++K
Sbjct: 312 EGFYKDGDIRNALVIWAR-VLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRK 368



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 11/198 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           + A+ VF+ M  +  C   I         LC+   F +A   +  + EKGL P V +Y  
Sbjct: 181 EDAIRVFREMGTVH-CSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSM 239

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++ GL     +  AL +++++  +G + +V  +NILI G    G   RA  ++  +    
Sbjct: 240 LMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXM-NRW 298

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              PN+VT+N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDA 358

Query: 261 ERVYREMVESGIFVDAVT 278
                + V   I    +T
Sbjct: 359 ILFLHDSVRKKIVPTKIT 376


>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 376

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/376 (53%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG   ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL    K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 192/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL+V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GKI+    L+  M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL++ +   +  G   + H+++ ++  L          R+   +   
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKS-GCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGL  +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W ++                          +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I +  +T
Sbjct: 361 FLHDAVTKKIVLTKIT 376


>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 376

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 270/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL+++     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSP +++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+N+LIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK+   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+ +  T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 194/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C  N+++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + KA+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVEKALQLWNQVTS------------------KGFKPDVQMHNVLIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M + G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C PN++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     ++L+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 4/263 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    +K+   L    +KG   D ++Y  +INGL K  +L  A++V + M + G + N
Sbjct: 104 FCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
              YN LI+G      +  A  ++  +  M  S  PN++TYN +INGLCK   F E   +
Sbjct: 164 AHVYNTLINGLVGASKFEDAIRVFREMGTMHCS--PNIITYNTLINGLCKNEMFGEAYNL 221

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +          TY   + GLC    VE A +++ ++   G   D   +N +I G C 
Sbjct: 222 VKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCS 281

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            GK++    L+  M R  C  N+VS+N L+ G  ++G +  A+ IW  +       D  +
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 348 HGVLINGLCKNGYLNKAIQILNE 370
           + + + GLC    ++ AI  L++
Sbjct: 342 YNITLKGLCSCNRISDAILFLHD 364



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 16/230 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+    E+ 
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFR--EMG 191

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQF 116
             +C  ++    ++I    KN M  +A ++ + + +  G   G+         LC   + 
Sbjct: 192 TMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKV 250

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           EKA +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L
Sbjct: 251 EKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTL 310

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           ++GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 311 MEGFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 11/198 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           + A+ VF+ M  +  C   I         LC+   F +A   +  L +KGL P V +Y  
Sbjct: 181 EDAIRVFREMGTMH-CSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++ GL     +  AL +++++  +G + +V  +N+LI G    G    A  ++  +    
Sbjct: 240 LMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDM-NRW 298

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A
Sbjct: 299 KCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDA 358

Query: 261 ERVYREMVESGIFVDAVT 278
                + V   I +  +T
Sbjct: 359 ILFLHDAVTKKIVLTKIT 376


>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 376

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 270/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +N KVDE ISIWEL+++     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL    + DE + +W+ MKK+   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  VDA  Y+AMI+G C+   +     +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 192/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F          IWE L+ ++    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNDKVDEVISIWE-LMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + KA+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVEKALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M + G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 4/263 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    +K+   L    +KG   D ++Y  +INGL K  +L  A++V + M + G + N
Sbjct: 104 FCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
              YN LI+G      +  A  ++  +  M  S  P ++TYN +INGLCK   F E   +
Sbjct: 164 AHVYNTLINGLVGASKFEDAIRVFREMGTMHCS--PTIITYNTLINGLCKNEMFGEAYNL 221

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +          TY   + GLC    VE A +++ ++   G   D   +N +I G C 
Sbjct: 222 VKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            GK++    L+  M R  C  N+VS+N L+ G  ++G +  A+ IW  +       D  +
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 348 HGVLINGLCKNGYLNKAIQILNE 370
           + + + GLC    ++ AI  L++
Sbjct: 342 YNITLKGLCSCNRISDAILFLHD 364



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G   G+         LC   + EK
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKVEK 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F +A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGKMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 367

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/368 (55%), Positives = 265/368 (72%), Gaps = 18/368 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C+ G+++GAERVY+E+VES +  DAV YNAM++G+ R G+IK+CFELWE+MGR+G  +V 
Sbjct: 1   CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGSRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI+ RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGYLNK+I +L   
Sbjct: 61  SFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                 E +L  A S++N M K+GCK NA+  N+L+NG + ASK 
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI + +EM     SPTVV+Y+ JINGLCK ERFGEAY  VKEML+KG  P +ITYSLL
Sbjct: 181 EDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC  +K+D AL+L  Q + KGF PDV M+NI+IHGLCS GK++ AL LY  M + +C
Sbjct: 241 IKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYY-MNRWDC 299

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L+PDIISYNITLKGLCSC+R+S A  
Sbjct: 300 APNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAIL 359

Query: 595 FLNDALCR 602
           FL DA+ +
Sbjct: 360 FLQDAVSK 367



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 187/376 (49%), Gaps = 22/376 (5%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD+ GA  V+ E+ E  V  + V YN +++G+F+ G      E+WE +  E S   +V +
Sbjct: 4   GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGS--RSVSS 61

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           +N+M  GL   G+ DE + +W+ MK++   +DS TY   +HG CK G +  +  V     
Sbjct: 62  FNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAE 121

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             G  +DA  Y+AMI+G C+  K+ +   +   M + GC  N   YN LI GL+   K +
Sbjct: 122 RKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFE 181

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +AI +   +   + +    T+  JINGLCK                 GE R  +A  LV 
Sbjct: 182 DAIRVLREMGTXHFSPTVVTYSXJINGLCK-----------------GE-RFGEAYDLVK 223

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M   G   +  T + L+ G     K++ A+ L+ ++  KG  P V  +N +I+GLC V 
Sbjct: 224 EMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVG 283

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A S    M      P+++T++ L+ G  +   +  AL +  + L+ G  PD+  YN
Sbjct: 284 KMQLALSLYY-MNRWDCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYN 342

Query: 508 ILIHGLCSAGKVEDAL 523
           I + GLCS  ++  A+
Sbjct: 343 ITLKGLCSCNRISGAI 358



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 179/370 (48%), Gaps = 21/370 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  + G +     +++ M   G  + V
Sbjct: 1   CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGSRS-V 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI+  G F  G       IWE L+ E+    + +TY ++++G CK G  ++ + + +
Sbjct: 60  SSFNIMXRGLFBNGKVDEVISIWE-LMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK   ++ A  V   M+++G   +A  YNA+I+G   A 
Sbjct: 119 IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGAS 178

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +   MG       VV+Y+ JI GL +  +  EA  + + + +K  N    T+ 
Sbjct: 179 KFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI GLC +  ++KA+Q+ N+V   G                  G++  A SL   M++ 
Sbjct: 239 LLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLY-YMNRW 297

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R   A
Sbjct: 298 DCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGA 357

Query: 453 YSFVKEMLEK 462
             F+++ + K
Sbjct: 358 ILFLQDAVSK 367



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E G +D A  +++ + E   + D+  +  ++NG  +                   GR+ D
Sbjct: 2   EIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFR------------------VGRIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + +  + N +  G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWELMGREGSR-SVSSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++    KG   D   YS +INGLC+  K+D A+ +    ++ G  P
Sbjct: 103 GFCKNGYLNKSIHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA+++   M   +  P +VTY+ J++GL K     +A ++ 
Sbjct: 163 NAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N  + +G  P     +I++  + + 
Sbjct: 223 KEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 11/294 (3%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+     K+   L     KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +INGL K   L  A++V + M + G + N   YN LI+G      +  A  +  R +
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIRVL-REM 190

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
                 P VVTY+ +INGLCK  RF E  ++   M          TY   I GLC    V
Sbjct: 191 GTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKV 250

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           + A +++ +++  G   D   +N MI G C  GK++    L+  M R  C  N+V++N L
Sbjct: 251 DKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLY-YMNRWDCAPNLVTHNTL 309

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + G  ++G V  A+ IW  +       D  ++ + + GLC    ++ AI  L +
Sbjct: 310 MEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQD 363


>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 376

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 267/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG   ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    C PT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL    K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C     T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCKRISDAILFLHDAVTKKIVLTKIT 376



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 193/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    L E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC  K+I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCKRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ L E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKELVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 10/294 (3%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +INGL K  +L  AL+V + M + G + NV  YN LI+G      +  A  ++ R +
Sbjct: 132 YSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVF-REM 190

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
                 P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    V
Sbjct: 191 GTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKV 250

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A +++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N L
Sbjct: 251 ERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTL 310

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 311 MEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLHD 364



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 16/230 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL++ +   +  G   + H+++ ++  L          R+    E+ 
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKS-GCKPNVHVYNTLINGLAGASKFEDAIRVFR--EMG 191

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQF 116
             +CP  +    ++I    KN M  +A ++ + + +  G + G+         LC   + 
Sbjct: 192 TMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKV 250

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E+A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L
Sbjct: 251 ERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTL 310

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           ++GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 311 MEGFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCKRISDAI 359



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGL  +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W ++                          +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I +  +T
Sbjct: 361 FLHDAVTKKIVLTKIT 376


>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 376

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 268/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++ AERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG KG  +V 
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKV+E ISIWEL+++     DS T+G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG +  SK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+  A  V+ E+ E  V  + V YN +++G+F+        E+WE  +M +    +V
Sbjct: 2   ESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE--MMGSKGNRSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ +E + +W+ MKK+   +DS TY   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   + +   +   M + GC  N   YN L+ GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V   N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 193/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M  +G   +V
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVNEVISIWE-LMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +++G     
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMLNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDSAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K+   I +++ M + G     ++Y  L++
Sbjct: 44  CFELWEMMGSKGNR-SVSSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN L++GL    K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 16/230 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+    E+ 
Sbjct: 135 MINGLCKEANLDKAVSVLNGMIKS-GCKPNAHVYNTLVNGLVGVSKFEDAIRVFR--EMG 191

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQF 116
             +C   +    ++I    KN M  +A ++ + + +  G   G+         LC   + 
Sbjct: 192 TVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKV 250

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E+A +  N +  KG KPDV     +I+GL   G +  AL+++ +M       N+V +N L
Sbjct: 251 ERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTL 310

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           ++GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 311 MEGFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 11/198 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           + A+ VF+ M  +  C   I         LC+   F +A   +  L +KGL P V +Y  
Sbjct: 181 EDAIRVFREMGTVH-CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++ GL     +  AL +++++  +G + +V   NILI G    G    A  ++  +    
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDM-NRW 298

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A
Sbjct: 299 KCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDA 358

Query: 261 ERVYREMVESGIFVDAVT 278
                + V   I +  +T
Sbjct: 359 ILFLHDAVTKKIVLTKIT 376


>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 376

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK + FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   +++ AL L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITL+GLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     ++E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLEGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 191/399 (47%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+ + N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHRVERALXLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLEGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   R+  A    N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHR 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A  ++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 250 VERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHD 364



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHRVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAI 359



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 123/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGLV +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA  +W ++                          +  S+Y        
Sbjct: 241 MKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I +  +T
Sbjct: 361 FLHDAVTKKIVLTKIT 376


>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 376

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+V S +  D+V YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL+++     DS T G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS G+++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 198/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+    V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK+   +DS T+   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   + +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V     A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 192/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    +    + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +T+ ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              +++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ +     + DS  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M + G     +++  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 4/270 (1%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG      C+     K+   L    +KG   D ++Y  +INGL K  +L  A++V + M 
Sbjct: 97  FGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMI 156

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGR 221
           + G + N   YN LI+G      +  A  ++  +  M  S  P ++TYN +INGLCK   
Sbjct: 157 KSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCS--PTIITYNTLINGLCKNEM 214

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           F E   +   +          TY   + GLC    VE A +++ ++   G   D   +N 
Sbjct: 215 FGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNI 274

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I G C  G+++    L+  M R  C  N+VS+N L+ G  ++G +  A+ IW  +    
Sbjct: 275 LIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNE 370
              D  ++ + + GLC    ++ AI  L++
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDKAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G   G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G++  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F +A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G+   A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGEMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 376

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 268/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MGR+G  +V 
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKV+E I IWEL+++     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A  ++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
             GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 XKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V++E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ +E + +W+ MKK+   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  VDA  Y+AMI+G C+   +     +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + L  G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 194/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R  N + E  + PD   Y  ++NG  +   +     ++ EM  R    +V
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGREGNRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ ++    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVEEVIXIWE-LMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L  GLC +  + KA+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLXKGLCLDHKVEKALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K+++A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  ++  + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYNEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M + G + +  + N +M G     K+E  I +++ M + G     ++Y  L++
Sbjct: 44  CFELWEMMGREGNR-SVSSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++  KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+ + +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVCVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G   G+         LC   + EK
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLXKGLCLDHKVEK 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F +A   +  L +KGL P V +Y  +  GL     +  AL +++++  +G + +
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGKMQHALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 376

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 269/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GA+RVY+++VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   +++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M    C
Sbjct: 241 MKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ ++ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     ++E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 192/399 (48%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + AKR    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V  +M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHRVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+   C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   R+  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL+V ++M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHR 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L+  M    C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRALSVLNDMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHRVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGLV +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W ++                          +  S+Y        
Sbjct: 241 MKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I +  +T
Sbjct: 361 FLHDAVTKKIVLTKIT 376


>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 376

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 265/376 (70%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++G ERVY+E+VES +  DAV +NAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL + GKVDE ISIWEL+++ +   DS T G+L++G CKNGY+NK++ +L   
Sbjct: 61  SFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           Z  G                 E  L  A  ++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 ZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY  VK+MLEKG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q + KGF PDV M+NILIHGLCS GK + AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW   L   L PDIISYNITLKGLCSC+R+ DA  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+PT IT
Sbjct: 361 FLHDAVRKKIVPTKIT 376



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ G   V+ E+ E  V  + V +N +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MKK++  +DS T+   +HG CK G +  +  V   
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
               G  +DA  Y+AMI+G C+   + +   +   M + GC  N   YN LI GL+   K
Sbjct: 120 AZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +    C+    T+  LINGLCKN             E  GE     A  L
Sbjct: 180 FEDAIRVFREMGXVRCSPTIITYNTLINGLCKN-------------EMFGE-----AYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++  KG  P V  +N LI+GLC 
Sbjct: 222 VKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +  ++  VP  +T
Sbjct: 342 YNITLKGLCSCNRICDAILFLHDAVRKKIVPTKIT 376



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 181/378 (47%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     +  +R    + E  + PD   +  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F KG       IWE L+ ++    + +T+ ++++G CK G  ++ L + +
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWE-LMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D+F Y + I+GLCK  N++ A  V  +M++SG   +A  YN +I+G   A 
Sbjct: 119 MAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA  + + + EK  N    T+ 
Sbjct: 179 KFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+ GLC +  + +A+Q+ N+V   G                  G+   A SL   M++ 
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++    R G  P ++SYN  + GLC   R  +A
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + + K   P  IT
Sbjct: 359 ILFLHDAVRKKIVPTKIT 376



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D    +++ + E   + D+  H  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGPERVYKEIVESKVSPDAVVHNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M +       +++  L++
Sbjct: 44  CFELWEMMGNEGNR-SVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++    KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYINKSLHVLEMAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M    C P ++TYNTL++GL K     +A ++ 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+ L P +I+Y++ +KGLC   ++  A +  N  + +G  P     +IL+  + + 
Sbjct: 223 KDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 2/269 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG      C+     K+   L     KG   D ++Y  +INGL K  +L  A+ V ++M 
Sbjct: 97  FGILVHGFCKNGYINKSLHVLEMAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMI 156

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G + N   YN LI+G      +  A  ++ R +      P ++TYN +INGLCK   F
Sbjct: 157 KSGCKPNAHVYNTLINGLVGASKFEDAIRVF-REMGXVRCSPTIITYNTLINGLCKNEMF 215

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  ++   M +        TY   + GLC    VE A +++ +++  G   D   +N +
Sbjct: 216 GEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNIL 275

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G C  GK +    L+  M R  C  N+V++N L+ G  ++G +  A+ IW        
Sbjct: 276 IHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGL 335

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNE 370
             D  ++ + + GLC    +  AI  L++
Sbjct: 336 EPDIISYNITLKGLCSCNRICDAILFLHD 364



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 11/236 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+ + +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDKAVXVLNDMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXV 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           +C        ++I    KN M  +A D+ + M E         +      LC   + E+A
Sbjct: 194 RCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERA 253

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            +  N +  KG KPDV  +  +I+GL   G    AL+++ +M       N+V +N L++G
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEG 313

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKK 234
           F+K GD   A  IW R  +   + P++++YN+ + GLC C R  D  L + D ++K
Sbjct: 314 FYKDGDIRNALVIWAR-XLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   +K+L V +  
Sbjct: 62  FNIMMRGLFDKGKVDEVISIWELMK-KSDFVEDSITFGILVHGFCKNGYINKSLHVLEMA 120

Query: 100 N------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
                  + F   A I  LC++   +KA   LN + + G KP+ + Y T+INGLV +   
Sbjct: 121 ZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    E+G+  +V+ Y++L
Sbjct: 181 EDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W +++                         +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+VT+N ++ G  K G     L +W R  +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I    +T
Sbjct: 361 FLHDAVRKKIVPTKIT 376


>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 376

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/376 (52%), Positives = 268/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERV++E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A  ++  M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLI+GLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +R C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ +  + T IT
Sbjct: 361 FLHDAVTKKTVLTKIT 376



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  VF E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  N+  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LI+GLCK     +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M  +   P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKTVLTKIT 376



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 191/399 (47%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +     EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R+ C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T    +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKTVLTKI 375



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVFKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++ +YN LI+GL  A K EDA++++  M   +C P ++TYNTL+ GL K     +A  + 
Sbjct: 163 NIHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 26/358 (7%)

Query: 37  SPHLFHHILRRLIDPKLVVH---------VSRI---LELIEIQKCYCPEDVALSVIQAYG 84
           +  +F  I+   + P  VV+         V++I    EL E+        V+   I   G
Sbjct: 9   AERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIMMRG 68

Query: 85  --KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
              N   D+ + +++ M E         +G      C+    +K+   L    +KG   D
Sbjct: 69  LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            ++Y  +INGL K  +L  AL V   M + G + N+  YN LI+G      +  A  ++ 
Sbjct: 129 AFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGASKFEDAIRVFR 188

Query: 195 RL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            +  M  S  P ++TYN +I+GLCK   F E   +   +     +    TY   + GLC 
Sbjct: 189 EMGTMHCS--PTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCL 246

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
              VE A +++ ++   G   D   +N +I G C  GK++    L+  M R+ C  N+VS
Sbjct: 247 DHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPNLVS 306

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           +N L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 307 HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL +     +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRALYVLTGMIKS-GCKPNIHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    K  M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M  R    N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359


>gi|255661026|gb|ACU25682.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 376

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 256/376 (68%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++ AERVY+EM ES I  DAV YNAM++G   AG+ K+CF LWE+M  +G  NV 
Sbjct: 1   CESGDIBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEGSXNVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+N ++ GL  NG+VDZ ISIWEL++E     D TT+G+L++G CKNGY NK++ +L   
Sbjct: 61  SFNXMMXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            + G                  G+   A S++N M   GCK N +  N+L+NG   ASK 
Sbjct: 121 XQXGGVLDAFAYSAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +FKE+    CSPT+V+YNTLINGLCK ERF EAY  VKEMLEKGW P  ITYSLL
Sbjct: 181 EDAIRVFKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLCQ  K++MAL+L  Q + KGF PDV M+NIL HGLCS GK Z A +LY +M   NC
Sbjct: 241 IKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCSVGKTZXASELYFDMNXWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT+NTLM+G +K GD   AL IW  IL   L PDIISYNITL GLCSC+R+S A  
Sbjct: 301 APNLVTHNTLMEGFYKXGDIRNALVIWXRILRNGLXPDIISYNITLIGLCSCNRISVAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL DA+ + I+PT IT
Sbjct: 361 FLXDAVTKNIVPTVIT 376



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 194/395 (49%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+  A  V+ EM E  +  + V YN +++G F  G       +WE +  E S   NV
Sbjct: 2   ESGDIBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEGSX--NV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N M+ GL   G  DZ + +W+ MK++   +D  TY   +HG CK G    +  V   
Sbjct: 60  ASFNXMMXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+ GK  +   +   M   GC  N   YN LI GL    K
Sbjct: 120 AXQXGGVLDAFAYSAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI +++ L   +C+    T+  LINGLCK                 GE R A+A  L
Sbjct: 180 FEDAIRVFKELGTXHCSPTIVTYNTLINGLCK-----------------GE-RFAEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + L+ G  Q  K+E A+ L+ ++  KG  P V  +N L +GLC 
Sbjct: 222 VKEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     +M      P+++T++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKTZXASELYFDMNXWNCAPNLVTHNTLMEGFYKXGDIRNALVIWXRILRNGLXPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++  A+    +   +N VP ++T
Sbjct: 342 YNITLIGLCSCNRISVAILFLXDAVTKNIVPTVIT 376



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 176/378 (46%), Gaps = 20/378 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG   +G       +++ M   G   NV
Sbjct: 1   CESGDIBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG-SXNV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N ++ G F  G+      IWE L+ E+    +  TY ++++G CK G  ++ L + +
Sbjct: 60  ASFNXMMXGLFXNGEVDZVISIWE-LMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
              +     D+F Y + I+G CK G  + A  V   M+ SG   +   YNA+I+G   A 
Sbjct: 119 IAXQXGGVLDAFAYSAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   +++ +G   C   +V+YN LI GL +  +  EA  + + + EK       T+ 
Sbjct: 179 KFEDAIRVFKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI GLC++  +  A+Q+ N+V   G                  G+   A+ L   M+  
Sbjct: 239 LLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCSVGKTZXASELYFDMNXW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  T N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R   A
Sbjct: 299 NCAPNLVTHNTLMEGFYKXGDIRNALVIWXRILRNGLXPDIISYNITLIGLCSCNRISVA 358

Query: 453 YSFVKEMLEKGWKPDMIT 470
             F+ + + K   P +IT
Sbjct: 359 ILFLXDAVTKNIVPTVIT 376



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 19/303 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +B A  +++ + E   + D+  +  ++NG                      GR  B
Sbjct: 2   ESGDIBXAERVYKEMAESKISPDAVVYNAMLNGXFX------------------AGRXKB 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G   N  + N +M G     +++  I +++ M   G      +Y  L++
Sbjct: 44  CFXLWELMXXEG-SXNVASFNXMMXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   + G   D   YS +ING C+  K D A+ +    +  G   
Sbjct: 103 GFCKNGYNNKSLHVLEIAXQXGGVLDAFAYSAMINGXCKXGKXDKAVSVLNGMIXSGCKX 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  +   +C P +VTYNTL++GL K     +A ++ 
Sbjct: 163 NTHVYNALINGLXXASKFEDAIRVFKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +LE+   P  I+Y++ +KGLC   ++  A +  N  + +G  P     +IL   + + 
Sbjct: 223 KEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCSV 282

Query: 622 GAS 624
           G +
Sbjct: 283 GKT 285



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 131/294 (44%), Gaps = 10/294 (3%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+     K+   L    + G   D ++
Sbjct: 72  NGEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIAXQXGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +ING  K G    A++V + M   G + N   YN LI+G      +  A  +++ L 
Sbjct: 132 YSAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKEL- 190

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
                 P +VTYN +INGLCK  RF E  ++   M +        TY   I GLC+   V
Sbjct: 191 GTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKV 250

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A +++ +++  G   D   +N +  G C  GK +   EL+  M    C  N+V++N L
Sbjct: 251 EMALQLWNQVISKGFXPDVQMHNILXHGLCSVGKTZXASELYFDMNXWNCAPNLVTHNTL 310

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + G  + G +  A+ IW  +       D  ++ + + GLC    ++ AI  L +
Sbjct: 311 MEGFYKXGDIRNALVIWXRILRNGLXPDIISYNITLIGLCSCNRISVAILFLXD 364



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A   +  + EKG  P   +Y  +I GL +   +  AL +++++  +G   +
Sbjct: 209 LCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NIL  G    G    A E++  +       PN+VT+N ++ G  K G     L +W
Sbjct: 269 VQMHNILXHGLCSVGKTZXASELYFDMNXWNCA-PNLVTHNTLMEGFYKXGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N    D  +Y   + GLC    +  A     + V   I    +T
Sbjct: 328 XRILRNGLXPDIISYNITLIGLCSCNRISVAILFLXDAVTKNIVPTVIT 376


>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 376

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 268/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLING CK + FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK+E AL LY +M +  C
Sbjct: 241 MEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITL+GLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T  T
Sbjct: 361 FLHDAVTKKIVLTKNT 376



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  + A  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LING CKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMELALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 342 YNITLEGLCSCNRISDAI 359



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 25/396 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++      +F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI G  +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMEGLCFDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K+E A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMELALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           +Y++ + GLC   +I  A+     FL    T  + +
Sbjct: 341 SYNITLEGLCSCNRISDAI----LFLHDAVTKKIVL 372



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG       YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++G  K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ ++GLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG     ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLGAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +ING CK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHD 364



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIK-SGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I  + KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMEGLCFDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAI 359


>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 376

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 267/376 (71%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV  NAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY +K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A  ++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V  N +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G  + +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 191/399 (47%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD      ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 21/302 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+     ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVCNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLE-KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           G CK   + +    V EM E KG   D   YS +INGLC+   +D AL +    ++ G  
Sbjct: 103 GFCK-NGYSDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK 161

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  +
Sbjct: 162 PNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNL 221

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + +
Sbjct: 222 VKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 621 NG 622
            G
Sbjct: 282 VG 283



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL + +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 79/316 (25%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           F+ ++R L D   V  V  I EL++ +  +  + +   + +  + KN   DK+L V +  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMK-ESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMA 120

Query: 100 NE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            +       F   A I  LC++   ++A   LN + + G KP+V+ Y T+INGLV +   
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 152 LGALAVFDEM-----------------------------------FERGVETNVVCYNIL 176
             A+ VF EM                                    ++G++  V+ Y++L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------------METSVY-------- 203
           + G        RA ++W ++                          +  S+Y        
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 204 -PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+V++N ++ G  K G     L +W R+ +N  E D  +Y   + GLC    +  A  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 263 VYREMVESGIFVDAVT 278
              + V   I +  +T
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C +G ++ A ++Y  + +    P+ V  N +++G F+        E+W  +  E  R  +
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGNRS-V 59

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            S+NI ++GL    ++ +           G +  +IT+ ILV     NG S
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYS 110


>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 375

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/375 (53%), Positives = 266/375 (70%), Gaps = 17/375 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A  ++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +   
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKY 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTI 609
           FL+DA+ +  + T I
Sbjct: 361 FLHDAVTKKTVLTKI 375



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 196/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCK     +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M    + P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 342 YNITLKGLCSCNRISDAI 359



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 189/399 (47%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +     EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R   +P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T    +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKTVLTKI 375



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L+  M R K   N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL + +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    K  M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359


>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 376

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/376 (52%), Positives = 266/376 (70%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKV E I IWEL++      DS T+G+L++G C NGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK NA+  N+L+NG + ASK 
Sbjct: 121 EQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FG AY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLNPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T IT
Sbjct: 361 FLHDAVTKKIVLTKIT 376



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 195/395 (49%), Gaps = 21/395 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+  E + +W+ MK +   +DS TY   +HG C  G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  + A  Y+AMI+G C+   +     +   M + GC  N   YN LI GL+   K
Sbjct: 120 AEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN     A  ++ E+              
Sbjct: 180 FEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           YNI + GLCS  ++ DA+    +   +  V   +T
Sbjct: 342 YNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 188/399 (47%), Gaps = 25/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+  +    + +TY ++++G C  G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVXEVIXIWE-LMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++      +F Y + I+GLCK  N++ A  V   M++SG   +A  YN +I+G   A 
Sbjct: 119 MAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  M    C   +++YN LI GL +N     A ++ + L +K  N    T+ 
Sbjct: 179 KFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLNPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + KA+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVEKALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           +Y++ + GLC   +I  A+     FL    T  + +  I
Sbjct: 341 SYNITLKGLCSCNRISDAI----LFLHDAVTKKIVLTKI 375



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG  +                    ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFR------------------XXKIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K+   I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C      ++   ++   +KG       YS +INGLC+   +B A+ +    ++ G  P
Sbjct: 103 GFCXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K      A  + 
Sbjct: 163 NAHVYNTLINGLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLBRAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M   A ++ + + +  G   G+         LC   + EK
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKVEK 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 359



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F  A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 209 LCKNEMFGXAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 269 VQMHNILIHGLCSVGKMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 372

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/372 (52%), Positives = 265/372 (71%), Gaps = 17/372 (4%)

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS 312
           ++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V S
Sbjct: 1   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSS 60

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   E
Sbjct: 61  FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 120

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           + G                 E  L  A S++N M K GCK N +  N+L+NG + ASK E
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 180

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           +AI +F+EM    CSPT+++YNTLINGLCK + FGEAY+ VKE+L+KG  P +ITYS+L+
Sbjct: 181 DAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLM 240

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            GLC   +++ AL L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C 
Sbjct: 241 KGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCA 300

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITL+GLCSC+R+SDA  F
Sbjct: 301 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 360

Query: 596 LNDALCRGILPT 607
           L+DA+ +  + T
Sbjct: 361 LHDAVTKKXVLT 372



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 196/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 1   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 58

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 59  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 118

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 119 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 178

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 179 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL-------------- 224

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     ++E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 225 ---LDK-GLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCS 280

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 281 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 340

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 341 YNITLEGLCSCNRISDAI 358



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 184/375 (49%), Gaps = 21/375 (5%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
             + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V  +N
Sbjct: 4   DIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFN 62

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +  ++
Sbjct: 63  IMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 121

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A K ++
Sbjct: 122 KGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFED 181

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ +L+ 
Sbjct: 182 AIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMK 241

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GLC +  + +A+ + N+V                     G K +    N L++G     K
Sbjct: 242 GLCLDHRVERALXLWNQVTS------------------KGFKPDVQMHNILIHGLCSVGK 283

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I+Y++
Sbjct: 284 MQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 343

Query: 474 LINGLCQSKKIDMAL 488
            + GLC   +I  A+
Sbjct: 344 TLEGLCSCNRISDAI 358



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 1   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 42

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 43  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 101

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 102 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 161

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 162 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLV 221

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   R+  A    N    +G  P     +IL+  + + 
Sbjct: 222 KELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSV 281

Query: 622 G 622
           G
Sbjct: 282 G 282



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 71  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 130

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 131 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 190

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 191 TMHCS--PTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHR 248

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A  ++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 249 VERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNT 308

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 309 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHD 363



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 134 MINGLCKEANLDRAVSVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 192

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 193 HCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHRVER 251

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 252 ALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 311

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 312 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAI 358


>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 373

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/373 (52%), Positives = 264/373 (70%), Gaps = 17/373 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+N ++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK + FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC    ++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL L  +M +  C
Sbjct: 241 MXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITL+GLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPT 607
           FL+DA+ +  + T
Sbjct: 361 FLHDAVTKKFVLT 373



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 194/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G      +E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLXFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 342 YNITLEGLCSCNRISDAI 359



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 187/391 (47%), Gaps = 21/391 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N ++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNXMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMXGLCLDHXVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L  +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLXFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +Y++ + GLC   +I  A+      + K F 
Sbjct: 341 SYNITLEGLCSCNRISDAILFLHDAVTKKFV 371



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ + GLC    +  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 12/295 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMXGLCLDHX 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L   M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  L++
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHD 364



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC     E+
Sbjct: 194 HCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMXGLCLDHXVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL++  +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAI 359


>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 376

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 262/376 (69%), Gaps = 17/376 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YN M++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+N ++RGL +NGKVDE ISIWEL+ E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A S++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLING CK + FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K+  AL+L  Q   KGF PDV M+NILI GLCS GK++ AL LY +M    C
Sbjct: 241 MEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITL+GLCSC+R+SDA  
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360

Query: 595 FLNDALCRGILPTTIT 610
           FL+DA+ + I+ T  T
Sbjct: 361 FLDDAVTKKIVLTKNT 376



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 194/380 (51%), Gaps = 25/380 (6%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YNI+++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N M+ GL   G+ DE + +W+ M ++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LING CKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+  A+ L+ +++ KG  P V  +N LI GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWK--PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           V +   A S   +M    WK  P++++++ L+ G  +   I  AL +  + L+ G  PD+
Sbjct: 282 VGKMQLALSLYFDM--NLWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 339

Query: 504 TMYNILIHGLCSAGKVEDAL 523
             YNI + GLCS  ++ DA+
Sbjct: 340 ISYNITLEGLCSCNRISDAI 359



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 20/370 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N ++ G F  G       IWE L+ E+    +  TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNTMMRGLFDNGKVDEVISIWE-LMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI G  +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+ GLC +  + +A+Q+ N+V   G                  G++  A SL   M+  
Sbjct: 239 MLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLW 298

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  N  + N+LM GF +   + NA+ ++  + R G  P ++SYN  + GLC   R  +A
Sbjct: 299 KCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDA 358

Query: 453 YSFVKEMLEK 462
             F+ + + K
Sbjct: 359 ILFLDDAVTK 368



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 151/301 (50%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  + +++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNIMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N++M G     K++  I +++ M+  G      +Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++G  K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ ++GLC   +++ A +  N    +G  P     +IL+R + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 12/303 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++++    N   D+ + +++ MNE         +G      C+    +K+   L    +K
Sbjct: 64  TMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAEQK 123

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   D ++Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A
Sbjct: 124 GGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183

Query: 190 KEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             ++  +  M  S  P ++TYN +ING CK   F E   +   +     +    TY   +
Sbjct: 184 IRVFREMGTMHCS--PTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLM 241

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLC    V  A +++ ++   G   D   +N +I G C  GK++    L+  M    C 
Sbjct: 242 EGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCA 301

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N+VS+N L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  
Sbjct: 302 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 361

Query: 368 LNE 370
           L++
Sbjct: 362 LDD 364



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 12/232 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I  + KN M  +A ++ + + +  G + G+         LC   +  +
Sbjct: 194 HCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMEGLCLDHKVAR 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +   D
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAILFLD 363


>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 369

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/368 (53%), Positives = 256/368 (69%), Gaps = 17/368 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++GN++GAERVY ++VE  +  DAV YNAM++GF RAG+I++CFELWE+MGR+G  +V 
Sbjct: 1   CESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREGRRSVA 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+N +IR L +NGKV+EA+SI EL+ +     DS T+G L+NG CKN Y+NK++Q+L   
Sbjct: 61  SFNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E +L  A  ++N M K GCK N    N+L+ G + ASKL
Sbjct: 121 EQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKL 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++AI +F EM      P +V+YN LINGL K +RFGEAY  VKEMLEKG  P +ITYSLL
Sbjct: 181 DDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLL 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++MAL+L  Q  +KGF PDV M+NILIHGLCS GK + AL LY +M + NC
Sbjct: 241 MKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PNLVT NTLM G +K G+   AL IW  IL   L+PDIISYNITLKGLCSC+R+SDA  
Sbjct: 301 APNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDIISYNITLKGLCSCNRISDAIL 360

Query: 595 FLNDALCR 602
           FL+DA+ +
Sbjct: 361 FLHDAVSK 368



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 193/378 (51%), Gaps = 21/378 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SG++ GA  V++++ ER V  + V YN +++GF++ G      E+WE +  E     +V
Sbjct: 2   ESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREGR--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N MI  L   G+ +E + + + M K+   +DS TY + ++G CK   +  + +V   
Sbjct: 60  ASFNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEI 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+  C+  K+++   +   M + GC  N   YN LI+GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           +D+AI ++  +   +   D  T+ +LINGL K                    R  +A  L
Sbjct: 180 LDDAIRVFHEMGTTHSPPDIVTYNILINGLFKG------------------DRFGEAYDL 221

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M + G   +  T + LM G     K+E A+ L+ ++++KG  P V  +N LI+GLC 
Sbjct: 222 VKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P+++T + L+ G  +   I  AL +  + L+    PD+  
Sbjct: 282 VGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDIIS 341

Query: 506 YNILIHGLCSAGKVEDAL 523
           YNI + GLCS  ++ DA+
Sbjct: 342 YNITLKGLCSCNRISDAI 359



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 21/379 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E+ + PD   Y  ++NG  ++G +     ++ EM  R    +V
Sbjct: 1   CESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELW-EMMGREGRRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N +I   F  G    A  I E L+ ++    +  TY  ++NG CK    ++ L++ +
Sbjct: 60  ASFNTMIRVLFDNGKVEEAMSIRE-LMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+ LCK   +E A  V   M++SG   +   YNA+I G   A 
Sbjct: 119 IAEQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGAS 178

Query: 291 KIKECFELWEVMGRK-GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ +   ++  MG      ++V+YNILI GL +  +  EA  + + + EK  +    T+ 
Sbjct: 179 KLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC    +  A+Q+ N+V                   K G K +    N L++G  
Sbjct: 239 LLMKGLCLGDKVEMALQLWNQVT------------------KKGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K + A+ L+ +M+R  C+P +V+ NTL+ G  K      A      +L    +PD+I
Sbjct: 281 SVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDII 340

Query: 470 TYSLLINGLCQSKKIDMAL 488
           +Y++ + GLC   +I  A+
Sbjct: 341 SYNITLKGLCSCNRISDAI 359



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 2/276 (0%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           F   ++ +G      C+ R   K+ + L    +KG   D ++Y  +IN L K   L  A+
Sbjct: 90  FVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMINALCKEAKLEKAV 149

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            V + M + G + N   YN LI G         A  ++  +   T   P++VTYN++ING
Sbjct: 150 CVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEM-GTTHSPPDIVTYNILING 208

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           L K  RF E  ++   M +   +    TY   + GLC    VE A +++ ++ + G   D
Sbjct: 209 LFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPD 268

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
              +N +I G C  GK +    L+  M R  C  N+V+ N L++G  ++G +  A+ IW 
Sbjct: 269 VQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWA 328

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +       D  ++ + + GLC    ++ AI  L++
Sbjct: 329 RILRNELQPDIISYNITLKGLCSCNRISDAILFLHD 364



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 146/355 (41%), Gaps = 55/355 (15%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L    + E+A      + + G   D  +YGT++NG  K+  +  +L V +   ++G   
Sbjct: 68  VLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVL 127

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +   Y+ +I+   K+    +A  +   ++ ++   PN   YN +I GL    + D+ + +
Sbjct: 128 DAFAYSAMINALCKEAKLEKAVCVLNGMI-KSGCKPNTCVYNALIKGLVGASKLDDAIRV 186

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M       D  TY   I+GL K      A  + +EM+E G+    +TY+ ++ G C 
Sbjct: 187 FHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCL 246

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             K++   +LW  + +KG   +V  +NILI GL   GK   A+S++  +   NC  +  T
Sbjct: 247 GDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVT 306

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              L+ G  K+G +  A+                                          
Sbjct: 307 QNTLMQGFYKDGNIRNAL------------------------------------------ 324

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            I A  L N +            P ++SYN  + GLC   R  +A  F+ + + K
Sbjct: 325 VIWARILRNEL-----------QPDIISYNITLKGLCSCNRISDAILFLHDAVSK 368


>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 348

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 247/348 (70%), Gaps = 17/348 (4%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
           C++G+++GAERVY+E+VES +  DAV YNAM++G+ R  KIK+CFELWE+MG +G  +V 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S+NI++RGL +NGKVDE ISIWEL++E     DS T+G+L++G CKNGY++K++ +L   
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E+ G                 E  L  A  ++N M K GCK N +  N+L+NG + ASK 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKF 180

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E+AI +F+EM    CSPT+++YNTLINGLCK E FGEAY+ VKE+L+KG  P +ITYS+L
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSML 240

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC   K++ AL+L  Q   KGF PDV M+NILIHGLCS GK++ AL LY +M +  C
Sbjct: 241 MKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKC 300

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            PNLV++NTLM+G +K GD   AL IW  IL   L PDIISYNITLKG
Sbjct: 301 APNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKG 348



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 188/367 (51%), Gaps = 21/367 (5%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +SGD+ GA  V+ E+ E  V  + V YN +++G+F+        E+WE +  E +   +V
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSV 59

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            ++N+M+ GL   G+ DE + +W+ MK++   +DS TY   +HG CK G ++ +  V   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
             + G  +DA  Y+AMI+G C+   +     +   M + GC  NV  YN LI GL+   K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            ++AI ++  +   +C+    T+  LINGLCKN    +A  ++ E+              
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKEL-------------- 225

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              +DK G      T + LM G     K+E A+ L+ +++ KG  P V  +N LI+GLC 
Sbjct: 226 ---LDK-GLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS 281

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A S   +M      P++++++ L+ G  +   I  AL +  + L+ G  PD+  
Sbjct: 282 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 341

Query: 506 YNILIHG 512
           YNI + G
Sbjct: 342 YNITLKG 348



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 21/368 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     + A+R    + E  + PD   Y  ++NG  +   +     +++ M   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI++ G F  G       IWE L+ E+    + +TY ++++G CK G  D+ L + +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWE-LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 118

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             ++     D+F Y + I+GLCK  N++ A  V   M++SG   +   YN +I+G   A 
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGAS 178

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++   ++  MG   C   +++YN LI GL +N    EA ++ + L +K  +    T+ 
Sbjct: 179 KFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYS 238

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+ GLC +  + +A+Q+ N+V                     G K +    N L++G  
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVTS------------------KGFKPDVQMHNILIHGLC 280

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ L+ +M+R  C+P +VS+NTL+ G  K      A      +L  G +PD+I
Sbjct: 281 SVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDII 340

Query: 470 TYSLLING 477
           +Y++ + G
Sbjct: 341 SYNITLKG 348



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           E+G +D A  +++ + E   + D+  +  ++NG     Y   A             ++ D
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNG-----YFRVA-------------KIKD 43

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G + +  + N +M G     K++  I +++ M   G     ++Y  L++
Sbjct: 44  CFELWEMMGSEGNR-SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVH 102

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     ++   ++   +KG   D   YS +INGLC+   +D AL +    ++ G  P
Sbjct: 103 GFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKP 162

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +A  + 
Sbjct: 163 NVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+  + + 
Sbjct: 223 KELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282

Query: 622 G 622
           G
Sbjct: 283 G 283



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           N   D+ + +++ M E         +G      C+    +K+   L    +KG   D ++
Sbjct: 72  NGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA 131

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL- 196
           Y  +INGL K  +L  AL V + M + G + NV  YN LI+G      +  A  ++  + 
Sbjct: 132 YSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M  S  P ++TYN +INGLCK   F E   +   +     +    TY   + GLC    
Sbjct: 192 TMHCS--PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHK 249

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           VE A +++ ++   G   D   +N +I G C  GK++    L+  M R  C  N+VS+N 
Sbjct: 250 VERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNT 309

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           L+ G  ++G +  A+ IW  +       D  ++ + + G
Sbjct: 310 LMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKG 348



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 12/217 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   AL + +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 193

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 194 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLDPGVITYSMLMKGLCLDHKVER 252

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 253 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 312

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           GF+K GD   A  IW R ++   + P++++YN+ + G
Sbjct: 313 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKG 348


>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 350

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 246/348 (70%), Gaps = 17/348 (4%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           NAM++G+ R  KIK+CFELWE+MG +G  +V S+NI++RGL +N KVDE ISIWEL+++ 
Sbjct: 3   NAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIMMRGLFDNDKVDEVISIWELMKKS 62

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               DS T+G+L++G CKNGY++K++ +L   E+ G                 E  L  A
Sbjct: 63  GFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRA 122

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            S++N M K GCK NA+  N+L+NG + ASK E+AI +F+EM    CSPT+++YNTLING
Sbjct: 123 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLING 182

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK E FGEAY+ VKE+L+KG  P +ITYS+L+ GLC   K++ AL+L  Q   KGF PD
Sbjct: 183 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 242

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V M+NILIHGLCS GK++ AL LY +M +  C PNLV++NTLM+G +K GD   AL IW 
Sbjct: 243 VQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWA 302

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            IL   L PDIISYNITLKGLCSC+R+SDA  FL+DA+ + I+ T IT
Sbjct: 303 RILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 350



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 22/371 (5%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           VC N +++G+F+        E+WE +  E +   +V ++N+M+ GL    + DE + +W+
Sbjct: 1   VC-NAMLNGYFRVAKIKDCFELWEMMGSEGN--RSVSSFNIMMRGLFDNDKVDEVISIWE 57

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MKK+   +DS TY   +HG CK G ++ +  V     + G  VDA  Y+AMI+G C+  
Sbjct: 58  LMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEA 117

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +     +   M + GC  N   YN LI GL+   K ++AI ++  +   +C+    T+ 
Sbjct: 118 NLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYN 177

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LINGLCKN    +A  ++ E+                 +DK G      T + LM G  
Sbjct: 178 TLINGLCKNEMFGEAYNLVKEL-----------------LDK-GLNPGVITYSMLMKGLC 219

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K+E A+ L+ +++ KG  P V  +N LI+GLC V +   A S   +M      P+++
Sbjct: 220 LDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLV 279

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +++ L+ G  +   I  AL +  + L+ G  PD+  YNI + GLCS  ++ DA+    + 
Sbjct: 280 SHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDA 339

Query: 530 KKRNCVPNLVT 540
             +  V   +T
Sbjct: 340 VTKKIVLTKIT 350



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 22/330 (6%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V S+  ++ GL  +  +   +++++ M + G   + + Y IL+ GF K G   ++  + E
Sbjct: 33  VSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 92

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
               +  V  +   Y+ MINGLCK    D  + + + M K+  + ++  Y + I+GL  A
Sbjct: 93  MAEQKGGVV-DAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGA 151

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVS 312
              E A RV+REM         +TYN +I+G C+     E + L + +  KG LN  V++
Sbjct: 152 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG-LNPGVIT 210

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y++L++GL  + KV++A+ +W  +  K    D   H +LI+GLC                
Sbjct: 211 YSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS--------------- 255

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G++  A SL   M++  C  N  + N+LM GF +   + NA+ ++  + R G  P 
Sbjct: 256 ---VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPD 312

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++SYN  + GLC   R  +A  F+ + + K
Sbjct: 313 IISYNITLKGLCSCNRISDAILFLHDAVTK 342



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 1/246 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            ++ D   L   M   G + +  + N +M G     K++  I +++ M + G     ++Y
Sbjct: 13  AKIKDCFELWEMMGSEGNR-SVSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITY 71

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             L++G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++
Sbjct: 72  GILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIK 131

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P+  +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++GL K     +
Sbjct: 132 SGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGE 191

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  +   +L++ L P +I+Y++ +KGLC   ++  A +  N    +G  P     +IL+ 
Sbjct: 192 AYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIH 251

Query: 617 AVMNNG 622
            + + G
Sbjct: 252 GLCSVG 257



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 4/263 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    +K+   L    +KG   D ++Y  +INGL K  +L  A++V + M + G + N
Sbjct: 78  FCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPN 137

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
              YN LI+G      +  A  ++  +  M  S  P ++TYN +INGLCK   F E   +
Sbjct: 138 AHVYNTLINGLVGASKFEDAIRVFREMGTMHCS--PTIITYNTLINGLCKNEMFGEAYNL 195

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +          TY   + GLC    VE A +++ ++   G   D   +N +I G C 
Sbjct: 196 VKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCS 255

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            GK++    L+  M R  C  N+VS+N L+ G  ++G +  A+ IW  +       D  +
Sbjct: 256 VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIIS 315

Query: 348 HGVLINGLCKNGYLNKAIQILNE 370
           + + + GLC    ++ AI  L++
Sbjct: 316 YNITLKGLCSCNRISDAILFLHD 338



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 109 MINGLCKEANLDRAVSVLNGMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM 167

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I    KN M  +A ++ + + +  G   G+         LC   + EK
Sbjct: 168 HCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK-GLNPGVITYSMLMKGLCLDHKVEK 226

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 227 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 286

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 287 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLKGLCSCNRISDAI 333



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+   F +A   +  L +KGL P V +Y  ++ GL     +  AL +++++  +G + +
Sbjct: 183 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 242

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +NILI G    G    A  ++  +       PN+V++N ++ G  K G     L +W
Sbjct: 243 VQMHNILIHGLCSVGKMQLALSLYFDM-NRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 301

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            R+ +N  E D  +Y   + GLC    +  A     + V   I +  +T
Sbjct: 302 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 350


>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 350

 Score =  370 bits (949), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 182/348 (52%), Positives = 242/348 (69%), Gaps = 17/348 (4%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           NAM+ G+ R  KIK+CFELWE+MG +G  +V S+N ++RGL +NGKVDE ISIWEL++E 
Sbjct: 3   NAMLKGYFRVAKIKDCFELWEMMGSEGNRSVSSFNTMMRGLFDNGKVDEVISIWELMKES 62

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               DS T+G+L++G CKNGY++K++ +L   E+ G                 E  L  A
Sbjct: 63  GFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRA 122

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            S++N M K GCK N +  N+L+NG + ASK E+AI +F+EM    CSPT+++YNTLING
Sbjct: 123 VSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLING 182

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            CK + FGEAY+ VKE+L+KG  P +ITYS+L+ GLC   K++ AL+L  Q   KGF PD
Sbjct: 183 FCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPD 242

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V M+NILIHGLCS GK++ AL LY +M +  C PNLV++NTLM+G +K GD   AL IW 
Sbjct: 243 VQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWA 302

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            IL   L PDIISYNITL+GLCSC+R+SDA  FL+DA+ + I+ T  T
Sbjct: 303 RILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIVLTKNT 350



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 179/354 (50%), Gaps = 22/354 (6%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           VC N ++ G+F+        E+WE +  E +   +V ++N M+ GL   G+ DE + +W+
Sbjct: 1   VC-NAMLKGYFRVAKIKDCFELWEMMGSEGN--RSVSSFNTMMRGLFDNGKVDEVISIWE 57

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK++   +DS TY   +HG CK G ++ +  V     + G  +DA  Y+AMI+G C+  
Sbjct: 58  LMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEA 117

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +     +   M + GC  NV  YN LI GL+   K ++AI ++  +   +C+    T+ 
Sbjct: 118 NLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYN 177

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LING CKN    +A  ++ E+                 +DK G      T + LM G  
Sbjct: 178 TLINGFCKNKMFGEAYNLVKEL-----------------LDK-GLDPGVITYSMLMEGLC 219

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K+E A+ L+ +++ KG  P V  +N LI+GLC V +   A S   +M      P+++
Sbjct: 220 FDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLV 279

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +++ L+ G  +   I  AL +  + L+ G  PD+  YNI + GLCS  ++ DA+
Sbjct: 280 SHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAI 333



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 162/329 (49%), Gaps = 20/329 (6%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V S+ T++ GL  +G +   +++++ M E G   + + Y IL+ GF K G   ++  + E
Sbjct: 33  VSSFNTMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLE 92

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
               +  V  +   Y+ MINGLCK    D  + + + M K+  + +   Y + I+GL  A
Sbjct: 93  MAEQKGGVL-DAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGA 151

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
              E A RV+REM         +TYN +I+GFC+     E + L + +  KG    V++Y
Sbjct: 152 SKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITY 211

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           ++L+ GL  + KV+ A+ +W  +  K    D   H +LI+GLC                 
Sbjct: 212 SMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCS---------------- 255

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G++  A SL   M++  C  N  + N+LM GF +   + NA+ ++  + R G  P +
Sbjct: 256 --VGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 313

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +SYN  + GLC   R  +A  F+ + + K
Sbjct: 314 ISYNITLEGLCSCNRISDAILFLHDAVTK 342



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 127/246 (51%), Gaps = 1/246 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            ++ D   L   M   G + +  + N++M G     K++  I +++ M   G     ++Y
Sbjct: 13  AKIKDCFELWEMMGSEGNR-SVSSFNTMMRGLFDNGKVDEVISIWELMKESGFVEDSITY 71

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             L++G CK     ++   ++   +KG   D   YS +INGLC+   +D A+ +    ++
Sbjct: 72  GILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIK 131

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P+V +YN LI+GL  A K EDA++++  M   +C P ++TYNTL++G  K     +
Sbjct: 132 SGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGE 191

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  +   +L++ L P +I+Y++ ++GLC   ++  A +  N    +G  P     +IL+ 
Sbjct: 192 AYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIH 251

Query: 617 AVMNNG 622
            + + G
Sbjct: 252 GLCSVG 257



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 12/303 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++++    N   D+ + +++ M E         +G      C+    +K+   L    +K
Sbjct: 38  TMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQK 97

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   D ++Y  +INGL K  +L  A++V + M + G + NV  YN LI+G      +  A
Sbjct: 98  GGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 157

Query: 190 KEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             ++  +  M  S  P ++TYN +ING CK   F E   +   +     +    TY   +
Sbjct: 158 IRVFREMGTMHCS--PTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLM 215

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLC    VE A +++ ++   G   D   +N +I G C  GK++    L+  M R  C 
Sbjct: 216 EGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCA 275

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N+VS+N L+ G  ++G +  A+ IW  +       D  ++ + + GLC    ++ AI  
Sbjct: 276 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 335

Query: 368 LNE 370
           L++
Sbjct: 336 LHD 338



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++N L  E N   A+++ +   +  G   + H+++ ++  L+         R+   +   
Sbjct: 109 MINGLCKEANLDRAVSVLNGMIKS-GCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTM 167

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C        ++I  + KN M  +A ++ + + +  G + G+         LC   + E+
Sbjct: 168 HCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDK-GLDPGVITYSMLMEGLCFDHKVER 226

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG KPDV  +  +I+GL   G +  AL+++ +M       N+V +N L++
Sbjct: 227 ALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLME 286

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           GF+K GD   A  IW R ++   + P++++YN+ + GLC C R  + +
Sbjct: 287 GFYKDGDIRNALVIWAR-ILRNGLEPDIISYNITLEGLCSCNRISDAI 333


>gi|297833656|ref|XP_002884710.1| hypothetical protein ARALYDRAFT_478217 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330550|gb|EFH60969.1| hypothetical protein ARALYDRAFT_478217 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 942

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 153/275 (55%), Positives = 201/275 (73%), Gaps = 10/275 (3%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FLN +W++G KPDV+SY TVIN L K+G L  AL +FD+M ER V  +V CYNILIDGF 
Sbjct: 200 FLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDDMSERRVAPDVTCYNILIDGFL 259

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+ D+  A ++W++L+ ++SVYPNV T+N+MI+GL KCGR D+CL++WDRMK+NEREKD 
Sbjct: 260 KEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDL 319

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           +TY S IHGLC  GNV+ AE V+ E+VE   F+D VTYN M+ GFCR GKIKE  ELW +
Sbjct: 320 YTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRI 379

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           M ++  +N+VSYNILI+GLLENGK+DEA  IW L+  K   AD+TT+G+ I+GLC NGY+
Sbjct: 380 MEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 439

Query: 362 NKAIQIL----------NEVEEGGEGRLADAASLV 386
           NKA+ ++          N VE G    L D+  L+
Sbjct: 440 NKALGVMQEVESKEEEENYVEAGDFEILNDSGELI 474



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
            +N M K G K + ++ ++++N   +  KL++A+ LF +MS +  +P V  YN LI+G  
Sbjct: 200 FLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDDMSERRVAPDVTCYNILIDGFL 259

Query: 445 KVERFGEAYSFVKEMLEKGW-KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           K +    A     ++LE     P++ T++++I+GL +  ++D  LK+  +  Q     D+
Sbjct: 260 KEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDL 319

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y+ LIHGLC  G V+ A  +++ + +R    ++VTYNT++ G  + G   ++LE+W  
Sbjct: 320 YTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-R 378

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I+E+R   +I+SYNI +KGL    ++ +A         +G      T+ I +  +  NG
Sbjct: 379 IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNG 437



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 21/259 (8%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLENGK 325
           M + G   D  +Y+ +I+   + GK+ +  EL++ M  R+   +V  YNILI G L+   
Sbjct: 204 MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDDMSERRVAPDVTCYNILIDGFLKEKD 263

Query: 326 VDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
              A+ +W+ LL + +   +  TH ++I+GL K G                  R+ D   
Sbjct: 264 HKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCG------------------RVDDCLK 305

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           + +RM ++  + + YT +SL++G      ++ A  +F E+  +     VV+YNT++ G C
Sbjct: 306 IWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFC 365

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +  +  E+    + ++E+    ++++Y++LI GL ++ KID A  +      KG+  D T
Sbjct: 366 RCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNT 424

Query: 505 MYNILIHGLCSAGKVEDAL 523
            Y I IHGLC  G V  AL
Sbjct: 425 TYGIFIHGLCVNGYVNKAL 443



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 119/225 (52%), Gaps = 4/225 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVET 168
           L +  + + A    + + E+ + PDV  Y  +I+G +K  D   A+ ++D++ E   V  
Sbjct: 223 LAKTGKLDDALELFDDMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 282

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NV  +NI+I G  K G      +IW+R+  +     ++ TY+ +I+GLC  G  D+   +
Sbjct: 283 NVKTHNIMISGLSKCGRVDDCLKIWDRM-KQNEREKDLYTYSSLIHGLCDEGNVDKAESV 341

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++ + + +   D  TY + + G C+ G ++ +  ++R ++E    V+ V+YN +I G   
Sbjct: 342 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLE 400

Query: 289 AGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
            GKI E   +W +M  KG   +  +Y I I GL  NG V++A+ +
Sbjct: 401 NGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGV 445



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 129/252 (51%), Gaps = 18/252 (7%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V SY+ +I  L + GK+D+A+ +++ + E+    D T + +LI+G  K      A+Q+ 
Sbjct: 212 DVFSYSTVINDLAKTGKLDDALELFDDMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLW 271

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +++                 ++      N  T N +++G  +  ++++ + ++  M +  
Sbjct: 272 DKL-----------------LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 314

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
               + +Y++LI+GLC      +A S   E++E+    D++TY+ ++ G C+  KI  +L
Sbjct: 315 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESL 374

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  + +++  + ++  YNILI GL   GK+++A  ++  M  +    +  TY   + GL
Sbjct: 375 EL-WRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 433

Query: 549 FKTGDCDKALEI 560
              G  +KAL +
Sbjct: 434 CVNGYVNKALGV 445


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 193/651 (29%), Positives = 324/651 (49%), Gaps = 68/651 (10%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL--------------- 61
           +P  AL  F  A+++ G+ H+ + ++ +   L+  + +     IL               
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62

Query: 62  -----------------ELIEIQKCYCP-EDVALS--VIQAYGKNSMPDKALDVFQRMNE 101
                            EL+E  +   P  D A+   VI A  K     KALD F+ M  
Sbjct: 63  AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME- 121

Query: 102 IFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
              CE  +         LC+  +  +A  +   + +KG  P+ ++Y  +ING  K   + 
Sbjct: 122 ---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +  EM E G+  NVV Y+ +I GF ++     A +++ ++V E    PN+VTYN +
Sbjct: 179 RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV-ENGCMPNLVTYNTL 237

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++GLC+ G  DE  E+ D M++   + D F+Y + + GLCK G ++ A +V+ +      
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             D V Y+ +I G C+AG++ E  +L+E M    C  +VV++  L+ GL +  ++ EA  
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + E + ++NC  +  T+  LI+GLCK G                  ++ DA  +  RM  
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTG------------------QVRDAQEVFKRMIV 399

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + N  T NSL++GF   + +++A+ L +EM+  GC P +++YNTLI+GLCK  R  E
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     +M  K   PD+ITYS LI G C+ ++IDMA  L    L++   PDV  ++ L+ 
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C+AG V+DA +L   M   +C P++ TY +L+DG  K G   +A  +   + +   +P
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++++Y   +   C   + + A+  L + +  G+ P  IT+  L+      G
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTG 630



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 176/557 (31%), Positives = 288/557 (51%), Gaps = 32/557 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +VI  + + +  D A  +F++M E  GC   +         LCR    ++A   L+ + E
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVE-NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +GL+PD +SY T++ GL K+G +  AL VF++        +VV Y+ LI G  K G    
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A +++E++  E S  P+VVT+  +++GLCK  R  E  ++ + M+      +  TY S I
Sbjct: 320 ACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLCK G V  A+ V++ M+  GI  + VTYN++I GFC    +     L E M   GCL
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++++YN LI GL + G+  EA  ++  ++ K CN D  T+  LI G CK          
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK---------- 488

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
              +E     R+  A +L + M K     +  T ++L+ G+  A  +++A  L +EM   
Sbjct: 489 ---LE-----RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 540

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            CSP V +Y +L++G CKV R  EA   +K M ++G +P+++TY+ LI+  C++ K  +A
Sbjct: 541 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 600

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-RNCVPNLVTYNTLMD 546
            +L  + +  G  P+V  Y  LI G C  G +E+A ++   +++  NC  ++  Y  +MD
Sbjct: 601 YRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMD 660

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND-ALCRGIL 605
           GL +TG    ALE+   I +    P    Y   ++GLC    +  A E L +  L R   
Sbjct: 661 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 720

Query: 606 PTTITWHILVRAVMNNG 622
           P    +  +++ +   G
Sbjct: 721 PNAEAYEAVIQELAREG 737



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 9/192 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM-------NEI-FGC 105
           +V   R+L+ +  + C        ++I A+ +   P  A  + + M       N I +  
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621

Query: 106 EAGILCRKRQFEKAKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
             G  C     E+A++ L  L  ++  K D+++Y  +++GL ++G +  AL + + + + 
Sbjct: 622 LIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 681

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G       Y  LI G  +  +  +A E+ E + +     PN   Y  +I  L + GR +E
Sbjct: 682 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 741

Query: 225 CLEMWDRMKKNE 236
              + D +  N+
Sbjct: 742 ANALADELLGNK 753


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 196/622 (31%), Positives = 308/622 (49%), Gaps = 44/622 (7%)

Query: 11   LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILR---RLIDPKLVVHVSRILELIEIQ 67
            +L+  +N   AL  FD AT + GY H  +  + +L+   RL  PK  + V R        
Sbjct: 817  VLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR-------N 869

Query: 68   KCYCPEDVALSVIQAYGKNSMPD--KALDVFQRMNEIFGCEAGI---------LCRKRQF 116
            K  C  ++    I  +G     D   A ++ + M    G    +         LC  R+ 
Sbjct: 870  KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR-HGVPQNVILHNVVIKGLCSARKL 928

Query: 117  EKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A      + E G   PDV++Y T+++ LVKSG +  A  + ++M  +G   NVV Y+ 
Sbjct: 929  DSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS 988

Query: 176  LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
            L+ G  K G    A  + +R+   +   PN+VTYN +I+G CK GR DE   + + M   
Sbjct: 989  LLHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 1047

Query: 236  EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
              + +  TY   +   CK G  E A  +   MVE G   +  TYN+++D FC+  +++  
Sbjct: 1048 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107

Query: 296  FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +L   M +KGC+ NVVSYN +I GL +  KV E + + E +   NC  D  T   +I+ 
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167

Query: 355  LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            +CK   ++ A ++ N ++E G                  C  N  T NSL++G  ++ + 
Sbjct: 1168 MCKTYRVDIAYELFNLIQESG------------------CTPNLVTYNSLVHGLCKSRRF 1209

Query: 415  ENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            + A +L +EM+RK GCSP +++YNT+I+GLCK +R   AY    +ML  G  PD +TYS+
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            +I+ LC+ + +D A  +    L+ GF P    Y  LI G C  G ++ AL++   +  + 
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              P++VT++  +D L K G   +A E+   +L   L PD ++YN  LKG C  S   DA 
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAV 1389

Query: 594  EFLNDALCRGILPTTITWHILV 615
            +        G  P   T+  LV
Sbjct: 1390 DLFEVMRQCGCEPDNATYTTLV 1411



 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 163/504 (32%), Positives = 278/504 (55%), Gaps = 19/504 (3%)

Query: 133  PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
            P+++++  +I+GL ++GD+  A  +  EM   GV  NV+ +N++I G         A E+
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 193  WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            ++ +    S  P+V TY+ +++ L K G+ D+   + + M       +  TY S +HGLC
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 253  KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            KAG ++ A  + + M  SG   + VTYN +IDG C+ G+I E + L E M   GC  NVV
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 312  SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            +Y +L+    + GK ++AI + E++ EK    +  T+  L++  CK   + +A Q+L+ +
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 372  EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
             + G                   ++ +   L+ +M  + C  +  T N++++   +  ++
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 415  ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKPDMITYSL 473
            + A  LF  +   GC+P +V+YN+L++GLCK  RF +A   ++EM  K G  PD+ITY+ 
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            +I+GLC+SK++D A KL  Q L  G  PD   Y+I+I  LC    +++A  +   M K  
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              P  +TY TL+DG  KTG+ DKALEI   +L +   PD+++++I +  L    R+  A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 594  EFLNDALCRGILPTTITWHILVRA 617
            E L   L  G++P T+T++ L++ 
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKG 1378



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 303/612 (49%), Gaps = 31/612 (5%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           +P  AL  F+ A    GY H     + +L  L+          +     I+  +  + V 
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFR-SRIEGQWGGDTVT 163

Query: 77  LS-VIQAYGKNSMPDKALDVFQRMNEI-FGCEAGI-------LCRKRQFEKAKRFLNSLW 127
            S +I  + +      A ++F  MN       AG+       LC   Q   A      + 
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM- 222

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            K   PD  +Y T+INGL KS  L  A+ + +EM + G   NV  YN ++ GF K     
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  + E++V      P+VV+Y  +INGLCK  + DE   + D+M +   + +  TY + 
Sbjct: 283 NALWLLEQMVTR-GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G C+ G+++GA  + R+M E G   +A+TYN ++  FCR   ++   ++ ++M + GC
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             + ++Y+ +I G  + GK+ EA  + E +  + C  D      LI+ LCK   ++ A +
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L         R++        MD   C  +    + L++   +A +L  A      M +
Sbjct: 462 LL---------RMSIG------MD---CAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
             C P VV+YN++++GLCK  R  +A+     M   G  PD++TYS++I+  C+   +D 
Sbjct: 504 NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A K+  +  +    PDV  Y+ LI+GLC AG V+ A  ++  M    C PNLVTYNTL+D
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLID 623

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    ++A E+   + ++   PD I+Y   + GLC+ SR+ +A+  L +   +G LP
Sbjct: 624 GLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLP 683

Query: 607 TTITWHILVRAV 618
             +T+  L+RA+
Sbjct: 684 DRMTYGTLLRAL 695



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 302/604 (50%), Gaps = 53/604 (8%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           SP +   +L+RLIDP   +      E  E +  Y                          
Sbjct: 92  SPEIVGKVLQRLIDPGAAL---VFFEWAETRDGY-------------------------- 122

Query: 97  QRMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
              +EIF C     +L +  Q+ +A     S  E     D  +Y T+I+G +++G +L A
Sbjct: 123 --QHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
             +FDEM  +G++ +   +  ++ G    G    A  +     M  +  P+ VTYN MIN
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDA--VLHFREMSKTCPPDSVTYNTMIN 238

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           GL K  R D+ + + + M  N    + F+Y + +HG CKA  VE A  +  +MV  G   
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           D V+Y  +I+G C+  ++ E   + + M ++GC  NV++Y  L+ G    G +D A+ + 
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------E 376
             + E+    ++ T+  +++  C+   + +A Q+L  + + G                  
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L +A  L+ +M + GC+ +    ++L++   +A+ +++A  L +      C+P VV+Y
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + LI+ LCK +R  EA S++  M++    PD++TY+ +++GLC+S++I+ A  L  +   
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PDV  Y+I+IH  C    ++ A ++   MK+  CVP++VTY+ L++GL K G  DK
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A +++  +L     P++++YN  + GLC  +++  A E L     +   P +IT+  L+ 
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 617 AVMN 620
            + N
Sbjct: 659 GLCN 662



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 257/476 (53%), Gaps = 23/476 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + + A R L  + + G  P+V+SY TV++G  K+  +  AL + ++M  RG   +
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  +I+G  K      A  + ++++ +    PNV+TY  +++G C+ G  D  +E+ 
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +     ++ TY + +H  C+  ++E A +V + M+++G   DA+ Y+ +I GFC+A
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK++E  +L E M R+GC  +V   + LI  L +   +D A  +  +    +C  D   +
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 349 GVLINGLCKNGYLNKA---------------IQILNEVEEG--GEGRLADAASLVNRMDK 391
            +LI+ LCK   L +A               +   N V +G     R+ DA  L +RM  
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T + +++ F + + L++A  + + M    C P VV+Y+ LINGLCK     +
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+   +EML  G  P+++TY+ LI+GLC+  K++ A ++     ++  TPD   Y  LI+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           GLC+A ++E+A ++   MK + C+P+ +TY TL+  L KT +    LE+   +L+E
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNN----LELVEQLLKE 710



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 261/495 (52%), Gaps = 21/495 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G + +++    ++N LVK+     A  +F    E     + V Y+ LI GF + G  + A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E+++ +     +  +   +  ++ GLC  G+  + +  +  M K     DS TY + I+
Sbjct: 181 YELFDEM-NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMIN 238

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GL K+  ++ A R+  EMV++G   +  +YN ++ GFC+A +++    L E M  +GC  
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VVSY  +I GL +  +VDEA  + + + ++ C  +  T+G L++G C+ G L+ A++  
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE-- 356

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                           LV +M + G + NA T N++M+ F + + +E A  + + M + G
Sbjct: 357 ----------------LVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P  ++Y+T+I+G CK  +  EA+  +++M+ +G +PD+   S LI+ LC++  ID A 
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L    +     PDV  Y+ILIH LC A ++ +A      M K  C P++VTYN+++DGL
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+   + A  +++ +    + PD+++Y+I +   C  + +  AF+ L        +P  
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580

Query: 609 ITWHILVRAVMNNGA 623
           +T+  L+  +   G 
Sbjct: 581 VTYSALINGLCKAGT 595



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/546 (27%), Positives = 268/546 (49%), Gaps = 41/546 (7%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+ R+   A    + +   G+ PDV +Y  VI+   K  +L  A  + + M E     +
Sbjct: 520  LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            VV Y+ LI+G  K G   +A ++++ + +     PN+VTYN +I+GLCK  + ++  EM 
Sbjct: 580  VVTYSALINGLCKAGTVDKAFDVFQEM-LGCGCAPNLVTYNTLIDGLCKINKVEQAAEML 638

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            + M+K     DS TY   I+GLC A  +E A RV REM + G   D +TY  ++    + 
Sbjct: 639  EIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKT 698

Query: 290  GKIKECFELWEVM-----GRKGCLNVVSYNILIRG-LLENGKVDEAISIWELLR-----E 338
              ++   +L + M     G+        +  +IRG +L         ++    R     +
Sbjct: 699  NNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKD 758

Query: 339  KNCNADSTTHGVLINGLC-KNGYLNKAIQILN-----EVEEGGEGRLAD--AASLVNRM- 389
            +        H   +  +  + G+ +K ++ILN     E  E    R       ++V ++ 
Sbjct: 759  QQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVL 818

Query: 390  -----------------DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                              + G   + YTCN L+   ++  + ++A+ +++  ++  CSP 
Sbjct: 819  QGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPN 876

Query: 433  VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            + ++  LI+GLC+    G AY  +KEM   G   ++I ++++I GLC ++K+D AL+L  
Sbjct: 877  MFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFK 936

Query: 493  QFLQKGF-TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  + G   PDV  Y+ ++  L  +GKV+DA +L  +M  + C PN+VTY++L+ GL K 
Sbjct: 937  EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA 996

Query: 552  GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            G  D+A  +   +      P+I++YN  + G C   R+ +A+  L + +  G  P  +T+
Sbjct: 997  GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056

Query: 612  HILVRA 617
             +L+ A
Sbjct: 1057 TVLLDA 1062



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 210/383 (54%), Gaps = 26/383 (6%)

Query: 240  DSFTYCSFIHGLCKAGNVEGAERVYREMV--ESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
            D++T    +  L +    + A +VYR  +     +F    T+  +I G CRAG I   +E
Sbjct: 843  DTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMF----TFTILIHGLCRAGDIGTAYE 898

Query: 298  LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK-NCNADSTTHGVLINGL 355
            L + M R G   NV+ +N++I+GL    K+D A+ +++ + E  +C  D  T+  +++ L
Sbjct: 899  LLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSL 958

Query: 356  CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             K+G                  ++ DA  LV  M   GC  N  T +SL++G  +A KL+
Sbjct: 959  VKSG------------------KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             A  L + M+R GCSP +V+YNT+I+G CK+ R  EAY  ++EM++ G +P+++TY++L+
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            +  C+  K + A+ L    ++KG+ P++  YN L+   C   +VE A QL S+M ++ CV
Sbjct: 1061 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            PN+V+YNT++ GL K     + + +   +L     PDI+++N  +  +C   R+  A+E 
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180

Query: 596  LNDALCRGILPTTITWHILVRAV 618
             N     G  P  +T++ LV  +
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGL 1203



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 283/647 (43%), Gaps = 140/647 (21%)

Query: 109  ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            + CR+   E+A + L  + + G  PD  +Y T+I+G  K+G L  A  + ++M  RG   
Sbjct: 379  VFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438

Query: 169  NVVCYNILIDGFFKKGDYMRAKEI----------------------------------WE 194
            +V C + LID   K      A+E+                                  W 
Sbjct: 439  DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498

Query: 195  RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN------------------- 235
             ++++   YP+VVTYN +++GLCK  R ++   ++DRM+                     
Sbjct: 499  DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558

Query: 236  ----------EREK------DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
                      ER K      D  TY + I+GLCKAG V+ A  V++EM+  G   + VTY
Sbjct: 559  NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618

Query: 280  NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
            N +IDG C+  K+++  E+ E+M ++ C  + ++Y  LI GL    +++EA  +   +++
Sbjct: 619  NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678

Query: 339  KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR-------------------- 378
            K C  D  T+G L+  L K   L    Q+L E+E   EG+                    
Sbjct: 679  KGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMM 738

Query: 379  --------LADAASLVNRMDKHG---CKLNAY--TCNSLMNGF-IQASKLENAIFLFKEM 424
                    L     +++  D+ G    + + Y  T  +   GF  +  ++ N+ F ++  
Sbjct: 739  AMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYA 798

Query: 425  SRKGCSPTVVSYNTLINGLCKVERFGEAY--SFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                   T     T++  + +  R G+A    F     ++G+  D  T + L+  L + K
Sbjct: 799  ETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLK 858

Query: 483  KIDMAL-----KLCC----------------------------QFLQKGFTPDVTMYNIL 509
            +   AL     KLCC                            +  + G   +V ++N++
Sbjct: 859  RPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVV 918

Query: 510  IHGLCSAGKVEDALQLYSNMKKR-NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
            I GLCSA K++ AL+L+  M++  +C P++ TY+T++D L K+G  D A  +   ++ + 
Sbjct: 919  IKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG 978

Query: 569  LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              P++++Y+  L GLC   ++ +A   L      G  P  +T++ ++
Sbjct: 979  CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 165/653 (25%), Positives = 298/653 (45%), Gaps = 92/653 (14%)

Query: 20   TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
            +AL LF               +  I+  L+    V    R++E +  + C        S+
Sbjct: 930  SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989

Query: 80   IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG 130
            +    K    D+A  + QRM    GC   I+         C+  + ++A   L  + + G
Sbjct: 990  LHGLCKAGKLDEATALLQRMTR-SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             +P+V +Y  +++   K G    A+ + + M E+G   N+  YN L+D F KK +  RA 
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCG------------------------------ 220
            ++   ++ +  V PNVV+YN +I GLCK                                
Sbjct: 1109 QLLSSMIQKGCV-PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167

Query: 221  -----RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFV 274
                 R D   E+++ ++++    +  TY S +HGLCK+   + AE + REM  + G   
Sbjct: 1168 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227

Query: 275  DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
            D +TYN +IDG C++ ++   ++L+  M   G   + V+Y+I+I  L +   +DEA ++ 
Sbjct: 1228 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 1287

Query: 334  ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----------------- 376
            EL+ +   +  + T+G LI+G CK G L+KA++IL  +   G                  
Sbjct: 1288 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 1347

Query: 377  GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            GRL  A  L+  M + G   +  T N+L+ GF  AS  E+A+ LF+ M + GC P   +Y
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407

Query: 437  NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             TL+  L   + + +  + V K M++ G+K +      L + L  S +++  ++L C  +
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN----HELSSKLEASIEVEADVRLGCAIV 1463

Query: 496  QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                          + G C  G  +DA +++  M +R    N+V ++ ++         +
Sbjct: 1464 D-------------MFGKC--GSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEE 1504

Query: 556  KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF--EFLNDALCRGILP 606
            +A  +W  +  E + PD +++ ++L  +C  + + DA   EF++ +   G+ P
Sbjct: 1505 QAFGLWRVMGLEGVEPDAVTF-LSLLTMCCHAGLLDAAVDEFVSISRDYGLEP 1556



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 187/369 (50%), Gaps = 24/369 (6%)

Query: 259 GAERVYREMVES--GIFVDAVTYNAMIDGFCRAGKIKECFELWE--VMGRKGCLNVVSYN 314
           GA  V+ E  E+  G   +    N +++   +A +  +  +L+   + G+ G  + V+Y+
Sbjct: 107 GAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGG-DTVTYS 165

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI G +  GK+  A  +++ +  K   A +  H  ++ GLC  G  + A+    E+ + 
Sbjct: 166 TLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                              C  ++ T N+++NG  ++ +L++AI L +EM   G +P V 
Sbjct: 226 -------------------CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVF 266

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SYNT+++G CK  R   A   +++M+ +G  PD+++Y+ +INGLC+  ++D A ++  + 
Sbjct: 267 SYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 326

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +Q+G  P+V  Y  L+ G C  G ++ A++L   M +R   PN +TYN +M    +  D 
Sbjct: 327 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDM 386

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++A ++   +++    PD I+Y+  + G C   ++ +A + L   + RG  P       L
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL 446

Query: 615 VRAVMNNGA 623
           + A+    A
Sbjct: 447 IDALCKAAA 455



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 237/537 (44%), Gaps = 80/537 (14%)

Query: 109  ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            + C+K + E+A + L+S+ +KG  P+V SY TVI GL K+  +   + + ++M       
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            ++V +N +ID   K      A E++  L+ E+   PN+VTYN +++GLCK  RFD+   +
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFN-LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215

Query: 229  WDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
               M + +    D  TY + I GLCK+  V+ A +++ +M+  G+  D VTY+ +I   C
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275

Query: 288  RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            +   + E   + E+M + G     ++Y  LI G  + G +D+A+ I +LL  K    D  
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            T  + I+ L K G L +A ++L  +   G                      DA  L   M
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395

Query: 390  DKHGCKLNAYTCNSLMNGFIQ--------------------------ASKLENAIFLFKE 423
             + GC+ +  T  +L+   +                           +SKLE +I +  +
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEAD 1455

Query: 424  MSRKGC----------SP-------------TVVSYNTLINGLCKVERFGEAYSFVKEML 460
            + R GC          SP              VV ++ ++      ++  +A+   + M 
Sbjct: 1456 V-RLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 461  EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKV 519
             +G +PD +T+  L+   C +  +D A+       +  G  P V  ++ +I  L   G V
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLV 1574

Query: 520  EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
             +A  L   M    C P+  T+N L+      GD ++AL +        L P   SY
Sbjct: 1575 NEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRV------AELNPTQASY 1622


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 190/512 (37%), Positives = 288/512 (56%), Gaps = 30/512 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +   A+     + + G  PDV +Y T+++G  K G L  AL +FD   +RG   +
Sbjct: 95  LCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPD 154

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN LI+GF K      A+ I +R+V E S+ P+VVTYN ++NGLCK GR DE     
Sbjct: 155 VVTYNALINGFCKADKLDEAQRILQRMVSE-SLVPDVVTYNSLVNGLCKNGRVDEA---- 209

Query: 230 DRMKKNER--EKDSFTYCSFIHGLCKA-GNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            RM   ++    +  TY + I GLC+    +E A ++  +MV +G   D V+YNA+I G 
Sbjct: 210 -RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            R   + E  +L+  + R+G    V +YNILI GLL+  +V+EA  ++  L +     D+
Sbjct: 269 AREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 328

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+ V I+GLCK G +  A+ +L +++E G                 E R+ +A  L++ 
Sbjct: 329 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 388

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE- 447
           M+  GC  NA + N+L+ G  +A K + A+  FKEM ++G  PTVV+YN L++GLCK   
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 448

Query: 448 --RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA +    M+EKG  PD++TYS LI+GL ++ K+D A +L      KG  P+V  
Sbjct: 449 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 508

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN LI GLC   KV++AL+L+  M ++ CVP+ +TY T++  L K    DKAL +++  L
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           E  + P    Y   + GLC+ +R+ +A + L 
Sbjct: 569 EAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 177/552 (32%), Positives = 303/552 (54%), Gaps = 32/552 (5%)

Query: 95  VFQRMNEIFGCEA---GILCRK----RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           V+ ++  I+  +A   GIL R      + EKA RF+  L  KGL  D+ ++   I+GL +
Sbjct: 4   VYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCR 62

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           +  +  A  VFD M + G   N + YN L+ G    G    A+ ++ER++ +    P+VV
Sbjct: 63  ASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI-KAGYSPDVV 121

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TYN +++G CK G+ DE L+++D   K     D  TY + I+G CKA  ++ A+R+ + M
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLL-ENGKV 326
           V   +  D VTYN++++G C+ G++ E   L  ++ +    NV++Y+ LI GL  E  ++
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARML--IVDKGFSPNVITYSTLISGLCRELRRL 239

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
           + A  + E +    C  D  ++  LI+GL +   +++A+++   V   G           
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 E R+ +A  L + + KHG + +A T    ++G  +A ++E+A+ + K+M  KGC
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P VVS+N +INGLCK +R  EA   +  M  KG  P+ I+++ LI G C++ K   A+ 
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSA---GKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
              + L++G  P V  YNIL+ GLC A   G++++A+ L+  M ++  VP++VTY+ L+D
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G  D A  +   +  +   P++ +YN  + GLC   ++ +A E     + +G +P
Sbjct: 480 GLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVP 539

Query: 607 TTITWHILVRAV 618
            TIT+  ++ A+
Sbjct: 540 DTITYGTIISAL 551



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 193/349 (55%), Gaps = 22/349 (6%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
           DA T   ++    ++GKI++     E +  KG  ++ ++NI I GL    ++ +A ++++
Sbjct: 15  DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFD 74

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +R+     +  T+  L++GLC NG                 GR++DA +L  RM K G 
Sbjct: 75  GMRKHGFWPNRITYNALLSGLC-NG-----------------GRMSDAQALYERMIKAGY 116

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             +  T N+L++GF +  KL+ A+ +F    ++G  P VV+YN LING CK ++  EA  
Sbjct: 117 SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQR 176

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            ++ M+ +   PD++TY+ L+NGLC++ ++D A  L    + KGF+P+V  Y+ LI GLC
Sbjct: 177 ILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLC 233

Query: 515 SA-GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
               ++E A QL   M    C P++V+YN L+ GL +     +AL+++  +L +   P++
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +YNI + GL    R+++AFE  +  +  G+ P  IT+ + +  +   G
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 229/483 (47%), Gaps = 67/483 (13%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SV 79
           AL +FD A +  G+      ++ ++        +    RIL+ + + +   P+ V   S+
Sbjct: 139 ALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRM-VSESLVPDVVTYNSL 196

Query: 80  IQAYGKNSMPDKA----LDVFQRMNEI-FGCEAGILCRK-RQFEKAKRFLNSLWEKGLKP 133
           +    KN   D+A    +D     N I +      LCR+ R+ E A++ L  +   G KP
Sbjct: 197 VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+ SY  +I+GL +   +  AL +F  +  +G E  V  YNILIDG  K+     A E++
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
             LV +  + P+ +TY V I+GLCK GR ++ L M   M +     D  ++ + I+GLCK
Sbjct: 317 SGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
              V+ AE +   M   G   +A+++N +I G CRAGK K+    ++ M ++G    VV+
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435

Query: 313 YNILIRGLL---ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           YNIL+ GL    + G++ EAI++++ + EK    D  T+  LI+GL              
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL-------------- 481

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
               G  G+L DA  L+  M+  GC  N YT NSL++G     K++ A+ LF  M  KGC
Sbjct: 482 ----GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 430 SPTVVSYNT-----------------------------------LINGLCKVERFGEAYS 454
            P  ++Y T                                   LI+GLC V R  EA  
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597

Query: 455 FVK 457
            ++
Sbjct: 598 LLQ 600



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 109/193 (56%), Gaps = 1/193 (0%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP   +   L+  L K  +  +A+ FV+++L KG   D+ T+++ I+GLC++ +I  A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQT 71

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +     + GF P+   YN L+ GLC+ G++ DA  LY  M K    P++VTYNTL+ G  
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D+AL+I++  ++    PD+++YN  + G C   ++ +A   L   +   ++P  +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 610 TWHILVRAVMNNG 622
           T++ LV  +  NG
Sbjct: 192 TYNSLVNGLCKNG 204


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 310/568 (54%), Gaps = 29/568 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +V+  + K +  + AL + ++M  + GC   +         LC+  Q ++A R ++ + +
Sbjct: 84  TVLHGFCKANRVENALWLLEQM-VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 142

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G +P+V +YGT+++G  + GDL GA+ +  +M ERG   N + YN ++ G         
Sbjct: 143 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDS 202

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++++ +    S  P+V TY+ +++ L K G+ D+   + + M       +  TY S +
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLCKAG ++ A  + + M  SG   + VTYN +IDG C+ G+I E + L E M   GC 
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 322

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NVV+Y +L+    + GK ++AI + E++ EK    +  T+  L++  CK   + +A Q+
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L+ + + G                   ++ +   L+ +M  + C  +  T N++++   +
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKPDMI 469
             +++ A  LF  +   GC+P +V+YN+L++GLCK  RF +A   ++EM  K G  PD+I
Sbjct: 443 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ +I+GLC+SK++D A KL  Q L  G  PD   Y+I+I  LC    +++A  +   M
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 562

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K    P  +TY TL+DG  KTG+ DKALEI   +L +   PD+++++I +  L    R+
Sbjct: 563 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 622

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRA 617
             A E L   L  G++P T+T++ L++ 
Sbjct: 623 RQAGELLETMLRAGLVPDTVTYNTLLKG 650



 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 171/509 (33%), Positives = 267/509 (52%), Gaps = 22/509 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           LC  R+ + A +    + E G   PDV++Y T+++ LVKSG +  A  + + M  +G   
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV Y+ L+ G  K G    A  + +R+   +   PN+VTYN +I+G CK GR DE   +
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + M     + +  TY   +   CK G  E A  +   MVE G   +  TYN+++D FC+
Sbjct: 313 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 372

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             +++   +L   M +KGC+ NVVSYN +I GL +  KV E + + E +   NC  D  T
Sbjct: 373 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 432

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              +I+ +CK   ++ A ++ N ++E G                  C  N  T NSL++G
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQESG------------------CTPNLVTYNSLVHG 474

Query: 408 FIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
             ++ + + A +L +EM+RK GCSP +++YNT+I+GLCK +R   AY    +ML  G  P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D +TYS++I+ LC+ + +D A  +    L+ GF P    Y  LI G C  G ++ AL++ 
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 594

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             +  +   P++VT++  +D L K G   +A E+   +L   L PD ++YN  LKG C  
Sbjct: 595 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 654

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
           SR  DA +        G  P   T+  LV
Sbjct: 655 SRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/492 (33%), Positives = 274/492 (55%), Gaps = 24/492 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            K   PD  +Y T+INGL KS  L  A+ + +EM + G   NV  YN ++ GF K     
Sbjct: 37  SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 96

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  + E++VM     P+VV+Y  +INGLCK  + DE   + D+M +   + +  TY + 
Sbjct: 97  NALWLLEQMVMR-GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 155

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G C+ G+++GA  + R+M E G   +A+TYN ++ G C   K+    +L++ M   G 
Sbjct: 156 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGS 215

Query: 308 L--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +V +Y+ ++  L+++GKVD+A  + E +  K C+ +  T+  L++GLCK        
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCK-------- 267

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G+L +A +L+ RM + GC  N  T N++++G  +  +++ A  L +EM 
Sbjct: 268 ----------AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             GC P VV+Y  L++  CK  +  +A   V+ M+EKG+ P++ TY+ L++  C+  +++
Sbjct: 318 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 377

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L    +QKG  P+V  YN +I GLC A KV + + L   M   NCVP++VT+NT++
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR--G 603
           D + KT   D A E++N I E    P++++YN  + GLC  SR  D  E+L   + R  G
Sbjct: 438 DAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK-SRRFDQAEYLLREMTRKQG 496

Query: 604 ILPTTITWHILV 615
             P  IT++ ++
Sbjct: 497 CSPDIITYNTVI 508



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 244/440 (55%), Gaps = 19/440 (4%)

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M  +  P+ VTYN MINGL K  R D+ + + + M  N    + F+Y + +HG CKA  V
Sbjct: 36  MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 95

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A  +  +MV  G   D V+Y  +I+G C+  ++ E   + + M ++GC  NV++Y  L
Sbjct: 96  ENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 155

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           + G    G +D A+ +   + E+    ++ T+  +++GLC    L+ A+Q+  E+EE G 
Sbjct: 156 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGS 215

Query: 377 ------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             G++ DA  LV  M   GC  N  T +SL++G  +A KL+ A 
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 275

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + M+R GCSP +V+YNT+I+G CK+ R  EAY  ++EM++ G +P+++TY++L++  
Sbjct: 276 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  K + A+ L    ++KG+ P++  YN L+   C   +VE A QL S+M ++ CVPN+
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           V+YNT++ GL K     + + +   +L     PDI+++N  +  +C   R+  A+E  N 
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 455

Query: 599 ALCRGILPTTITWHILVRAV 618
               G  P  +T++ LV  +
Sbjct: 456 IQESGCTPNLVTYNSLVHGL 475



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 237/497 (47%), Gaps = 64/497 (12%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D AL +F+ M E   C   +         L +  + + A R + ++  KG  P+V +Y +
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL K+G L  A A+   M   G   N+V YN +IDG  K G    A  + E +V + 
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DG 319

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              PNVVTY V+++  CKCG+ ++ + + + M +     + FTY S +   CK   VE A
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE-------------------------- 294
            ++   M++ G   + V+YN +I G C+A K+ E                          
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439

Query: 295 ---------CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA-ISIWELLREKNCNA 343
                     +EL+ ++   GC  N+V+YN L+ GL ++ + D+A   + E+ R++ C+ 
Sbjct: 440 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAAS-LV 386
           D  T+  +I+GLCK+  +++A ++  ++   G                + R  D A+ ++
Sbjct: 500 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 559

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K+G    A T  +L++GF +   L+ A+ + + +  KG  P VV+++  I+ L K 
Sbjct: 560 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A   ++ ML  G  PD +TY+ L+ G C + + + A+ L     Q G  PD   Y
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679

Query: 507 NILIHGLCSAGKVEDAL 523
             L+  L      +D L
Sbjct: 680 TTLVGHLVDKKSYKDLL 696



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 196/367 (53%), Gaps = 18/367 (4%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M   G+   A  + +++ G C AG+  +    +  M +    + V+YN +I GL ++ ++
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
           D+AI + E + +     +  ++  +++G CK   +  A+ +L ++   G           
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   ++ +A  ++++M + GC+ N  T  +L++GF +   L+ A+ L ++M+ +G 
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KPDMITYSLLINGLCQSKKIDMAL 488
            P  ++YN +++GLC   +   A    KEM E G   PD+ TYS +++ L +S K+D A 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L    + KG +P+V  Y+ L+HGLC AGK+++A  L   M +  C PN+VTYNT++DG 
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  D+A  +   +++   +P++++Y + L   C C +  DA   +   + +G +P  
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 360

Query: 609 ITWHILV 615
            T++ L+
Sbjct: 361 FTYNSLL 367



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 189/353 (53%), Gaps = 56/353 (15%)

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M RKG   +   +  ++RGL + G+  +A+  +  +  K C  DS T+  +INGL K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L+ AI++L E                  M  +G   N ++ N++++GF +A+++ENA++L
Sbjct: 60  LDDAIRLLEE------------------MVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            ++M  +GC P VVSY T+INGLCK+++  EA   + +M+++G +P++ITY  L++G C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK--------- 531
              +D A++L  +  ++G+ P+   YN ++HGLCS  K++ ALQL+  M++         
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 532 ---------------------------RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
                                      + C PN+VTY++L+ GL K G  D+A  +   +
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
                 P+I++YN  + G C   R+ +A+  L + +  G  P  +T+ +L+ A
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 244/527 (46%), Gaps = 66/527 (12%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+   +++ L + +   +AL LF               +  I+  L+    V    R++E
Sbjct: 185 ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRK 113
            +  + C        S++    K    D+A  + QRM    GC   I+         C+ 
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR-SGCSPNIVTYNTIIDGHCKL 303

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + ++A   L  + + G +P+V +Y  +++   K G    A+ + + M E+G   N+  Y
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N L+D F KK +  RA ++   ++ +  V PNVV+YN +I GLCK  +  E + + ++M 
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCV-PNVVSYNTVIAGLCKATKVHEGVLLLEQML 422

Query: 234 KNEREKD--SF---------------------------------TYCSFIHGLCKAGNVE 258
            N    D  +F                                 TY S +HGLCK+   +
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482

Query: 259 GAERVYREMV-ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
            AE + REM  + G   D +TYN +IDG C++ ++   ++L+  M   G   + V+Y+I+
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 542

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I  L +   +DEA ++ EL+ +   +  + T+G LI+G CK G L+KA++IL  +   G 
Sbjct: 543 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 602

Query: 377 -----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            GRL  A  L+  M + G   +  T N+L+ GF  AS+ E+A+ 
Sbjct: 603 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV-KEMLEKGWK 465
           LF+ M + GC P   +Y TL+  L   + + +  + V K M++ G+K
Sbjct: 663 LFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 709


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 278/514 (54%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A  +   + +KG  P+ ++Y  +ING  K   +  A  +  EM E G+  N
Sbjct: 17  LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 76

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +I GF ++     A +++ ++V E    PN+VTYN +++GLC+ G  DE  E+ 
Sbjct: 77  VVTYSTVIHGFCRQTKVDTAYKLFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 135

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M++   + D F+Y + + GLCK G ++ A +V+ +        D V Y+ +I G C+ 
Sbjct: 136 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKT 195

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +L+E M    C  +VV++  L+ GL +  ++ EA  + E + ++NC  +  T+
Sbjct: 196 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK G                  ++ DA  +  RM   G + N  T NSL++GF
Sbjct: 256 SSLIDGLCKTG------------------QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              + +++A+ L +EM+  GC P +++YNTLI+GLCK  R  EA     +M  K   PD+
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITYS LI G C+ ++IDMA  L    L++   PDV  ++ L+ G C+AG V+DA +L   
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M   +C P++ TY +L+DG  K G   +A  +   + +   +P++++Y   +   C   +
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + A++ L + +  G+ P  IT+  L+      G
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTG 511



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 288/557 (51%), Gaps = 32/557 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +VI  + + +  D A  +F++M E  GC   +         LCR    ++A   L+ + E
Sbjct: 82  TVIHGFCRQTKVDTAYKLFRQMVE-NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +GL+PD +SY T++ GL K+G +  AL VF++        +VV Y+ LI G  K G    
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDE 200

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A +++E++  E S  P+VVT+  +++GLCK  R  E  ++ + M+      +  TY S I
Sbjct: 201 ACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 259

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLCK G V  A+ V++ M+  GI  + VTYN++I GFC    +     L E M   GCL
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++++YN LI GL + G+  EA  ++  ++ K CN D  T+  LI G CK          
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK---------- 369

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
              +E     R+  A +L + M K     +  T ++L+ G+  A  +++A  L +EM   
Sbjct: 370 ---LE-----RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            CSP V +Y +L++G CKV R  EA   +K M ++G +P+++TY+ LI+  C++ K  +A
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-RNCVPNLVTYNTLMD 546
            KL  + +  G  P+V  Y  LI G C  G +E+A ++   +++  NC  ++  Y  +MD
Sbjct: 482 YKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMD 541

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND-ALCRGIL 605
           GL +TG    ALE+   I +    P    Y   ++GLC    +  A E L +  L R   
Sbjct: 542 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 601

Query: 606 PTTITWHILVRAVMNNG 622
           P    +  +++ +   G
Sbjct: 602 PNAEAYEAVIQELAREG 618



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 258/493 (52%), Gaps = 20/493 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           +V ++  +I+GL K+  L  A   F +M ++G   N   YN+LI+GF K     RA  + 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +  E+ + PNVVTY+ +I+G C+  + D   +++ +M +N    +  TY + + GLC+
Sbjct: 66  KEM-KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            G ++ A  +  EM E G+  D  +Y+ ++ G C+ GKI    +++E      C  +VV+
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y+ LI GL + G++DEA  ++E +RE +C  D  T   L++GLCK   L +A Q+L  +E
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
           +                    C  N  T +SL++G  +  ++ +A  +FK M  +G  P 
Sbjct: 245 D------------------RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+YN+LI+G C       A   ++EM   G  PD+ITY+ LI+GLC++ +   A +L  
Sbjct: 287 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 346

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
               K   PDV  Y+ LI G C   +++ A  L+ +M K+  +P++VT++TL++G    G
Sbjct: 347 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D A  +   ++     PD+ +Y   + G C   RM +A   L     RG  P  +T+ 
Sbjct: 407 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 466

Query: 613 ILVRAVMNNGAST 625
            L+ A    G  T
Sbjct: 467 ALIDAFCRAGKPT 479



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 214/405 (52%), Gaps = 18/405 (4%)

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           E EK+  T+   I GLCKA  +  A   + +M + G   +  TYN +I+GFC+  K+   
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           + L + M   G   NVV+Y+ +I G     KVD A  ++  + E  C  +  T+  L++G
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LC+NG +++A ++L+E+ E G                  G++  A  +        C  +
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               ++L+ G  +  +L+ A  LF++M    C P VV++  L++GLCK +R  EA   ++
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M ++   P++ITYS LI+GLC++ ++  A ++  + + +G  P+V  YN LIHG C   
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            V+ AL L   M    C+P+++TYNTL+DGL KTG   +A  ++  +  +   PD+I+Y+
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + G C   R+  A    +D L + +LP  +T+  LV    N G
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 9/192 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM-------NEI-FGC 105
           +V   R+L+ +  + C        ++I A+ +   P  A  + + M       N I +  
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502

Query: 106 EAGILCRKRQFEKAKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
             G  C     E+A++ L  L  ++  K D+++Y  +++GL ++G +  AL + + + + 
Sbjct: 503 LIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 562

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G       Y  LI G  +  +  +A E+ E + +     PN   Y  +I  L + GR +E
Sbjct: 563 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 622

Query: 225 CLEMWDRMKKNE 236
              + D +  N+
Sbjct: 623 ANALADELLGNK 634


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 308/633 (48%), Gaps = 87/633 (13%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC-YC-PEDVALS 78
           A+  FD  T +PGY HS    + +L   +  K         +L +  +C  C P+ +  S
Sbjct: 115 AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKK---KAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
            +                     I G      C+ R F++A R L+ + ++G+ P    Y
Sbjct: 172 TL---------------------ING-----FCKARDFQQAYRLLDEMEKRGIVPHNAVY 205

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            T+I GL  +G +  AL  + +M +R    +V+ Y IL+D   K      A  I E ++ 
Sbjct: 206 NTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMI- 263

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           E    PNVVTYN +ING CK G  DE + ++++M +N    D FTY   I G CK    +
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 323

Query: 259 GAERVYREMVE-------------------SGIFVDAV----------------TYNAMI 283
              ++ +EMV+                   SG ++DA                 T+N MI
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D FC+ G++   +EL+++M  +GCL ++ +YNI+I G     ++D+A  + E + E  C 
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 443

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T+  +++GLCK   +++A ++   +  GG                    L+  TC+
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF------------------LDVVTCS 485

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G  ++ +L++A  L +EM R G +P VV+Y  LI+G CK ++  ++ +F  EML+K
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P +ITYS++I+ LC+S ++     L    L++G TPD  +Y  +I GLC +   ++A
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            +LY  MK+  C P +VTYN L+D L K    D+A+ +   +  +   PD ++YN    G
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDG 665

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
               +    AF        RG  PT   + +L+
Sbjct: 666 FWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 225/459 (49%), Gaps = 29/459 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           ++I  + K    D+A+ +F +M E   C   +          C++ + +   + L  + +
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 334

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G +P+  +Y T+++ LVKSG  + A  +   M  R  + +   +N++ID F K G    
Sbjct: 335 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDL 394

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A E+++ L+ +    P++ TYN+MI+G C+  R D+  ++ +RM +     D  TY S +
Sbjct: 395 AYELFQ-LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLCKA  V+ A  VY  +   G F+D VT + +IDG C++ ++ +  +L   M R G  
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV+Y ILI G  +  ++D++++ +  + +K C     T+ ++I+ LCK+  +     +
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L  + E G                      +A  L   M + GC     T N L++   +
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            S+L+ AI L + M   GC P  V+YN++ +G  K     +A+   + M  +G  P    
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           YSLL+  L   +K+D A+++  + L+ G   D  +   L
Sbjct: 694 YSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 135/232 (58%), Gaps = 1/232 (0%)

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G K + +TCN L++ F++  K + A  LFK      CSP  ++Y+TLING CK   F 
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +AY  + EM ++G  P    Y+ +I GLC + ++D AL +  + +Q+   P V  Y IL+
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILV 243

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             LC + ++ DA  +  +M +  C PN+VTYNTL++G  K G+ D+A+ ++N +LE    
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           PD+ +YNI + G C   R  D  + L + +  G  P  IT++ L+ +++ +G
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 186/661 (28%), Positives = 325/661 (49%), Gaps = 65/661 (9%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           + K+L+  L+ + +   AL +F+ A+++P +  S  ++  ILR+L       ++ R+LE 
Sbjct: 63  TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 122

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE---------------------- 101
           +++  C     + L  +++YGK  + D+ + + + M +                      
Sbjct: 123 MKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDAN 182

Query: 102 ----------------------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
                                  F      LC+  Q   A   +  +   GL PD  ++ 
Sbjct: 183 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 242

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           T++ G ++ G+L GAL + ++M E G     V  N+LI+GF K+G   +A    +  V E
Sbjct: 243 TIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSE 302

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
               P+  TYN ++NGLCK G     +E+ D M     + D +TY S I GLCK G +E 
Sbjct: 303 -GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEE 361

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A ++  +MV      +AVTYNA+I   C+  ++ E  E+  ++  KG L +V ++N LI+
Sbjct: 362 AVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQ 421

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL  +     A+ ++E ++ K C  D  T+ +LI+ LC +  L +A+ +L E        
Sbjct: 422 GLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE-------- 473

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                     M+ +GC  N    N+L++GF +  ++E A  +F EM  +G S   V+YNT
Sbjct: 474 ----------MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+GLCK +R  +A   + +M+ +G +PD  TY+ L+   C++  I  A  +       G
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+  Y  LI GLC AG+V+ A +L  +++ +  V     YN ++  LFK     +A+
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAM 643

Query: 559 EIWNHILEERLRPDIISYNITLKGLCS-CSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++  +L++   PD I+Y I  +GLC+    + +A +F  + + RG +P   ++ +L   
Sbjct: 644 RLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703

Query: 618 V 618
           +
Sbjct: 704 L 704



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 234/491 (47%), Gaps = 19/491 (3%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P    Y  ++  L K+G       V +EM   G E +   + I ++ + K   Y     I
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            + +  E  + P+   YNV++N L    +          M +     D  T+   I  LC
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           KA  V  A  +  EM   G+  D  T+  ++ G+   G +     + E M   GC    V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           + N+LI G  + G++D+A+S  +    +    D  T+  L+NGLCK G+   A+++++ +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
             GG             +D      + YT NSL++G  +  ++E A+ +  +M  + CSP
Sbjct: 335 LLGG-------------LDP-----DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V+YN +I+ LCK  R  EA    + +  KG  PD+ T++ LI GLC S     A+ L 
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   KG  PD   YN+LI  LCS+ K+E+AL L   M+   C  N+V YNTL+DG  K 
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
              ++A EI++ +  + +  D ++YN  + GLC   R+ DA + ++  +  G+ P   T+
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 612 HILVRAVMNNG 622
           + L+      G
Sbjct: 557 NSLLTHFCKTG 567



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 239/516 (46%), Gaps = 68/516 (13%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCE-----AGIL----CRKRQFEKAKR 121
           P++   + I Q Y +    D AL + ++M E +GC        +L    C++ + ++A  
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVE-YGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F+     +G +PD ++Y T++NGL K G    A+ V D M   G++ ++  YN LI G  
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC 354

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G+   A +I +++V      PN VTYN +I+ LCK  R DE  E+   +       D 
Sbjct: 355 KLGEIEEAVKILDQMV-SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            T+ S I GLC + N + A  ++ EM   G   D  TYN +ID  C + K++E   L + 
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   GC  NVV YN LI G  +N +++EA  I++ +  +  + DS T+  LI+GLCK+  
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533

Query: 361 LNKAIQILNE-VEEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  A Q++++ + EG                  G +  AA +V  M   GC  +  T  +
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593

Query: 404 LMNGFIQASKLE-----------------------------------NAIFLFKEMSRKG 428
           L++G  +A +++                                    A+ LF+EM  K 
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653

Query: 429 CSPTVVSYNTLINGLCKVE-RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
             P  ++Y  +  GLC      GEA  F  EM+E+G  P+  ++ +L  GLC     D  
Sbjct: 654 EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTL 713

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +KL    ++K    +  +    I G     K +DAL
Sbjct: 714 VKLVDMIMEKAKFSEREIST--IRGFLKIRKFQDAL 747


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 169/502 (33%), Positives = 272/502 (54%), Gaps = 18/502 (3%)

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV    + I GC     C+    ++A++ +  + E GL PD  +Y  ++NGL K   L  
Sbjct: 161 DVITYTSLIVGC-----CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEE 215

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
              + +EM E G E +   YN ++    + G Y  A +I E+++ E    P+VVTYN ++
Sbjct: 216 VSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI-EKKCGPDVVTYNSLM 274

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +G CK  + DE   + + M          TY + I G  +A  +  A RV  +M ++GI 
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYN ++DG C+AGK++E  EL EVM  K C  +VV+Y+IL+ GL + GKVD+A  +
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLN---KAIQILNEVEEGGE----GRLADAASL 385
            E++ E+ C  +  T   +I+G CK G ++   K ++++ EV    +      L D    
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454

Query: 386 VNRMDKH----GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
            NRM       G   +  + +S++ G     K+E A  +   M+++GC PT   Y  +I 
Sbjct: 455 ANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC VER  EA   ++ M E+G +P++ TYS+LINGLC++K+++ A+ +    L+KG  P
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y  LI G C   K++ A Q +  M+   C P+ + YN L+ G  ++G+ +KA+E+ 
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634

Query: 562 NHILEERLRPDIISYNITLKGL 583
             +LE+   PD  +Y   ++ L
Sbjct: 635 QLMLEKGCNPDAATYFSLMRSL 656



 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 157/502 (31%), Positives = 268/502 (53%), Gaps = 28/502 (5%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F    +    KP   +YG +I G  ++G+    L + +EM  R    +V+ +N ++  + 
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + GD  RA   + R  M  S  P   TY ++I+GLC+C R DE  ++ D M + +   D+
Sbjct: 71  QIGDLDRALSHF-RGKMWCS--PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y   I GLCK G ++ A  V + M+E     D +TY ++I G C+   + E  +L E 
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G   + V+YN L+ GL +  +++E   + E + E     D+ ++  ++  LC++  
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES-- 245

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G+  +A  ++ +M +  C  +  T NSLM+GF + SK++ A  L
Sbjct: 246 ----------------GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERL 289

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            ++M  + C+PTV++Y TLI G  + +R  +AY  +++M + G  PD++TY+ L++GLC+
Sbjct: 290 LEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCK 349

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           + K++ A +L    ++K   PDV  Y+IL++GLC  GKV+DA  L   M +R C PNLVT
Sbjct: 350 AGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVT 409

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           +NT++DG  K G  D+  ++   + E    PD+++Y+  + G C  +RM DAF  L    
Sbjct: 410 FNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL---- 465

Query: 601 CRGILPTTITWHILVRAVMNNG 622
             GI P   ++  ++  + + G
Sbjct: 466 --GISPDKASYSSMLEGLCSTG 485



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 283/531 (53%), Gaps = 25/531 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A + L+ + +K   PD   Y  +I GL K G +  A  V   M ER    +
Sbjct: 102 LCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ Y  LI G  +      A+++ E++  E+ + P+ V YN ++NGLCK  + +E  ++ 
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKM-KESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +  RE D+F+Y + +  LC++G  E A ++  +M+E     D VTYN+++DGFC+ 
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ E   L E M GR+    V++Y  LI G     ++ +A  + E + +   + D  T+
Sbjct: 281 SKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY 340

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++GLCK G L +A ++L  + E                    G++ DA  L+  M +
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC+ N  T N++++GF +A K++    + + M    C+P VV+Y+TLI+G CK  R  +
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A++ +      G  PD  +YS ++ GLC + K++ A ++     ++G  P  + Y ++I 
Sbjct: 461 AFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC   + ++AL++   M +R C PNL TY+ L++GL KT   + A+ + + +LE+   P
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+ +Y   + G C  ++M  A++        G  P  + ++IL+     +G
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSG 625



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 264/498 (53%), Gaps = 38/498 (7%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG---VETNVVCYNILIDGF 180
           N +  +   PDV ++ T++    + GDL  AL+ F     RG          Y ILI G 
Sbjct: 48  NEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF-----RGKMWCSPTAFTYCILIHGL 102

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            +      A ++ + ++ +   +P+   YN +I GLCK G+ D    +   M +     D
Sbjct: 103 CQCQRIDEAYQLLDEMI-QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY S I G C+   ++ A ++  +M ESG+  D V YNA+++G C+  +++E  +L E
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 301 VM---GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            M   GR+   +  SYN ++  L E+GK +EA  I E + EK C  D  T+  L++G CK
Sbjct: 222 EMVEAGREP--DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
              +++A ++L +              +V R     C     T  +L+ GF +A +L +A
Sbjct: 280 VSKMDEAERLLED--------------MVGRR----CAPTVITYTTLIGGFSRADRLADA 321

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             + ++M + G SP +V+YN L++GLCK  +  EA+  ++ M+EK   PD++TYS+L+NG
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+  K+D A  L    L++G  P++  +N +I G C AGKV++  ++   MK+ +C P+
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +VTY+TL+DG  K      A  I        + PD  SY+  L+GLCS  ++ +A E ++
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 598 DALCRGILPTTITWHILV 615
               +G  PT+  + +++
Sbjct: 496 LMTKQGCPPTSSHYALII 513


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 181/594 (30%), Positives = 304/594 (51%), Gaps = 44/594 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A  F + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFTTLLHG-----LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  KKGD + A  +  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++YN +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ D  T   LI+G C    ++  +++L+E+   G                 
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L  +M   G   +  TCN+L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V++YN LI GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +N LI+G C AG+V+D L+L+  M +R  V + + Y TL
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + G  K G+ + AL+I+  ++   + PD I+    L G  S   +  A   L D
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676



 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 286/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      + + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL  F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L +  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK------------------QDR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  + +T  +L++G+  A ++++ + L  EM R+G     V+YNT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G C V     A    ++M+  G  PD++T + L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF-KAMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A +++  +  +   P+++++N  + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             I +  L+   R V N NGA
Sbjct: 615 DAIIYITLIYGFRKVGNINGA 635



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 226/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+  ++ G C   ++ E  + +  M    C  NVV++  L+ GL  
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITY+ +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +PDV  +  LI G C A +++D ++L   M +R  V N VTYNTL
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G    GD + AL++   ++   + PDI++ N  L GLC   ++ DA E          
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P  +T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEG 525



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 223/461 (48%), Gaps = 40/461 (8%)

Query: 91  KALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
            AL++ ++M E         I+      LC+  +   A+     + EKG+ PD+++Y ++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I G   SG    A  +  EM ER +  +VV YN LI+ F K+G +  A E+++ + +   
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM-LPRG 355

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PN +TYN MI+G CK  R D   +M+  M       D FT+ + I G C A  ++   
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
            +  EM   G+  + VTYN +I GFC  G +    +L + M   G C ++V+ N L+ GL
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475

Query: 321 LENGKVDEAISIWELLREKNCNADST-----------THGVLINGLCKNGYLNKAIQILN 369
            +NGK+ +A+ +++ +++   + D++           T+ +LI GL              
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN------------ 523

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 EG+  +A  L   M   G   +  T +S+++G  + S+L+ A  +F  M  K  
Sbjct: 524 ------EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 577

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP VV++NTLING CK  R  +      EM  +G   D I Y  LI G  +   I+ AL 
Sbjct: 578 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 637

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           +  + +  G  PD      ++ G  S  ++E A+ +  +++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +  L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             +  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I+P  + +  ++ ++  +G
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 8/129 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I    K S  D+A  +F  M           F       C+  + +        +  +
Sbjct: 551 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  D   Y T+I G  K G++ GAL +F EM   GV  + +    ++ GF+ K +  RA
Sbjct: 611 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670

Query: 190 KEIWERLVM 198
             + E L M
Sbjct: 671 VAMLEDLQM 679


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 317/662 (47%), Gaps = 68/662 (10%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           S  +LL+LL+ + +  +AL+LF  A+ +P Y+  P +FH +LR+L        +  +L  
Sbjct: 58  SPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQ 117

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSM-------------------PDK-----ALDVFQRM 99
           +   K    E   L  ++ Y  +                     PD      AL +  + 
Sbjct: 118 MHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKA 177

Query: 100 NEI---------------------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           N++                     F      LC+  Q   A   L  +   GL+PD  ++
Sbjct: 178 NKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTF 237

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            T++ G ++  D+ GAL + + M E G E   V  N+L++G  K+G   R +E    +  
Sbjct: 238 TTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEG---RIEEALRFIYE 294

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           E    P+ VT+N ++NGLC+ G   + LEM D M +   E D +TY S I GLCK G ++
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A  +   MV      + VTYN +I   C+   ++   EL  V+  KG L +V ++N LI
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
           +GL      + A+ ++E ++EK C+ D  T+ +LI  LC                   E 
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC------------------SER 456

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           RL +A  L+  M+  GC  N    N+L++G  + +++ +A  +F +M   G S + V+YN
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLINGLCK +R  EA   + +M+ +G KPD  TY+ ++   CQ   I  A  +       
Sbjct: 517 TLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  PD+  Y  LI GLC AG+V+ A +L  +++ +  V     YN ++  L K     +A
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEA 636

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCS-CSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           + ++  ++E+   PD+I+Y I  +GLC+    + +A +F  + L +GILP   ++  L  
Sbjct: 637 MRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAE 696

Query: 617 AV 618
            +
Sbjct: 697 GL 698



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 238/478 (49%), Gaps = 24/478 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + E+A RF+    E+G  PD  ++  ++NGL ++G +   L + D M E+G E +
Sbjct: 279 LCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN LI G  K G+   A EI   +V      PN VTYN +I  LCK    +   E+ 
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMV-SRDCEPNTVTYNTLIGTLCKENHVEAATELA 395

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +       D  T+ S I GLC   N E A  ++ EM E G   D  TY+ +I+  C  
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++KE   L + M   GC  NVV YN LI GL +N +V +A  I++ +     +  S T+
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515

Query: 349 GVLINGLCKNGYLNKAIQILNE-VEEG----------------GEGRLADAASLVNRMDK 391
             LINGLCK+  + +A Q++++ + EG                 +G +  AA +V  M  
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +GC+ +  T  +L+ G  +A +++ A  L + +  KG   T  +YN +I  LCK +R  E
Sbjct: 576 NGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKE 635

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSK-KIDMALKLCCQFLQKGFTPDVTMYNILI 510
           A    +EM+EKG  PD+ITY ++  GLC     I  A+    + L+KG  P+   +  L 
Sbjct: 636 AMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLA 695

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
            GLCS    +  +QL + + ++       +  +++ G  K    + AL     IL+ +
Sbjct: 696 EGLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDALANLGAILDRK 751



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 249/518 (48%), Gaps = 31/518 (5%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTV----INGLVKSGDLLGALAVFDEMFERGVET 168
           +RQ + +       W    +P+  ++ +V    +  L ++G     L +  +M    +  
Sbjct: 67  RRQPDSSSALSLFQWASA-QPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPV 125

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMET--SVYPNVVTYNVMINGLCKCGRFDECL 226
           +   + I ++ +     ++ A+     L+ME   +V P+   YNV ++ L K  +     
Sbjct: 126 DESTFLIFLETY-ATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVE 184

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  +M  +    D  T+   I  LCKA  +  A  +  +M   G+  D  T+  ++ GF
Sbjct: 185 TLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGF 244

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS-IWELLREKNCNAD 344
                ++    + E+M   GC L  VS N+L+ GL + G+++EA+  I+E   E+    D
Sbjct: 245 IEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE---EEGFCPD 301

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   L+NGLC+ G++ + +++++                   M + G +L+ YT NSL
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMD------------------FMLEKGFELDVYTYNSL 343

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G  +  +++ A+ +   M  + C P  V+YNTLI  LCK      A    + +  KG 
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD+ T++ LI GLC +   ++A++L  +  +KG  PD   Y+ILI  LCS  ++++AL 
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   M+   C  N+V YNTL+DGL K      A +I++ +    +    ++YN  + GLC
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              R+ +A + ++  +  G+ P   T+  +++     G
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 187/419 (44%), Gaps = 60/419 (14%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC++   E A      L  KG+ PDV ++ ++I GL  + +   A+ +F+EM E+G +
Sbjct: 380 GTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD 439

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   Y+ILI+    +     A  + + + + +    NVV YN +I+GLCK  R  +  +
Sbjct: 440 PDEFTYSILIESLCSERRLKEALMLLKEMEL-SGCARNVVVYNTLIDGLCKNNRVGDAED 498

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++D+M+     + S TY + I+GLCK+  VE A ++  +M+  G+  D  TY  M+  FC
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFC 558

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G IK   ++ + M   GC  ++V+Y  LI GL + G+VD A  +   ++ K       
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  +I  LCK     +A+++  E+ E G+                              
Sbjct: 619 AYNPVIQALCKRKRTKEAMRLFREMMEKGD------------------------------ 648

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK-VERFGEAYSFVKEMLEKGWK 465
                                   P V++Y  +  GLC       EA  F  EMLEKG  
Sbjct: 649 -----------------------PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGIL 685

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDAL 523
           P+  ++  L  GLC     D  ++L    ++KG F+   T    +I G     K  DAL
Sbjct: 686 PEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETS---IIRGFLKIQKFNDAL 741



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 12/172 (6%)

Query: 91  KALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +A D+ Q M  + GCE  I         LC+  + + A + L S+  KG+     +Y  V
Sbjct: 565 RAADIVQNMT-LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPV 623

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I  L K      A+ +F EM E+G   +V+ Y I+  G    G  ++    +   ++E  
Sbjct: 624 IQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKG 683

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + P   ++  +  GLC     D  +++ + + +  R   S T  S I G  K
Sbjct: 684 ILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET--SIIRGFLK 733


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/644 (29%), Positives = 325/644 (50%), Gaps = 29/644 (4%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
            + K+L + L+ + +  + L L D A+++P +  S  ++  +LR+L        + R+L+
Sbjct: 70  FTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQ 129

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE---------AGILCRK 113
            ++   C       L +I++Y K  + D+A+ V   M E FG +           +L   
Sbjct: 130 EMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDG 189

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + +  +   + +  +G+KPDV ++  +I  L ++  +  A+ + +EM   G+  +   +
Sbjct: 190 NKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTF 249

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             L+ GF ++G+   A  I E++V       N VT NV+++G CK GR +E L   D M 
Sbjct: 250 TTLMQGFIEEGNMNGALRIREQMVAAGCPSSN-VTVNVLVHGYCKEGRIEEVLSFIDEMS 308

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D FT+ S ++GLC+ G+V+ A  +   M++ G   D  TYN++I G C+ G+++
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368

Query: 294 ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  E+  +++ R    N V+YN LI  L +  +V+EA  +  +L  K    D  T   LI
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 428

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
            GLC       A+++  E++  G                  GRL +A SL+  M+  GC 
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N  T N+L++GF +  ++E A  +F EM  +G S  VV+YNTLI+GLCK  R  EA   
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQL 548

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + +ML +G KPD  TY+ L+   C++  I  A  +       G  PD   Y  LI GL  
Sbjct: 549 MDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSK 608

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           AG+VE A +L   ++ +  V    TYN ++  LF+     +A+ ++  ++E+   PD ++
Sbjct: 609 AGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVT 668

Query: 576 YNITLKGLCS-CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           Y +  +GLCS    + +A +FL +   +G LP   ++ +L   +
Sbjct: 669 YKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 241/479 (50%), Gaps = 26/479 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++ + E+   F++ +  +G +PD +++ +++NGL + G +  AL + D M + G + ++
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI G  K G+   A EI  ++++     PN VTYN +I+ LCK  + +E  E+  
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILR-DFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +       D  T+ S I GLC   N   A  ++ EM   G   D  TYN +ID  C  G
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +++E   L + M   GC  NVV+YN LI G  +N +++EA  I++ +  +  + +  T+ 
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            LI+GLCKN  + +A Q+++++   G                  G +  AA +V  M  +
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC+ ++ T  +L+ G  +A ++E A  L + +  KG      +YN +I  L + +R  EA
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEA 650

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSK-KIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +EM+EKG  PD +TY ++  GLC     I  A+    +   KGF PD + + +L  
Sbjct: 651 VRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAE 710

Query: 512 GLCSAGKVEDALQLYSN--MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           GLC A  +ED L    N  MK+ N   + V   +++ G  K      AL     IL  R
Sbjct: 711 GLC-ALSMEDTLIKLVNRVMKQANFSDSEV---SMIMGFLKIRKFQDALATLGRILSSR 765



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 213/433 (49%), Gaps = 22/433 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR    + A   L+ + ++G  PD+++Y ++I GL K G++  A+ + ++M  R    N
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI    K+     A E+  R++    + P+V T+N +I GLC        +E++
Sbjct: 386 TVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF 444

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D FTY   I  LC  G +E A  + +EM  SG   + VTYN +IDGFC+ 
Sbjct: 445 EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKN 504

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +I+E  E+++ M  +G   NVV+YN LI GL +N +V+EA  + + +  +    D  T+
Sbjct: 505 KRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTY 564

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L+   C+ G + KA  I+  +   G                  GR+  A+ L+  +  
Sbjct: 565 NSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQL 624

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE-RFG 450
            G  L   T N ++    +  +   A+ LF+EM  KG  P  V+Y  +  GLC      G
Sbjct: 625 KGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIG 684

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA  F+ EM +KG+ PD  ++ +L  GLC     D  +KL  + +++    D  +   +I
Sbjct: 685 EAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVS--MI 742

Query: 511 HGLCSAGKVEDAL 523
            G     K +DAL
Sbjct: 743 MGFLKIRKFQDAL 755



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 206/426 (48%), Gaps = 21/426 (4%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVE 258
           T+  P   T   + + L +    D  L++ D   K       S  Y   +  L K G+  
Sbjct: 63  TTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFG 122

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
              RV +EM  +G  +   T+  +I+ + +     E   + ++M  +  L  +  +YN L
Sbjct: 123 SMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFL 182

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  L++  K+     +   +  +    D TT  +LI  LC+   +  AI ++ E      
Sbjct: 183 LNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEE------ 236

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M  +G   +  T  +LM GFI+   +  A+ + ++M   GC  + V+ 
Sbjct: 237 ------------MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTV 284

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L++G CK  R  E  SF+ EM  +G++PD  T++ L+NGLC+   +  AL++    LQ
Sbjct: 285 NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ 344

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +GF PD+  YN LI GLC  G+VE+A+++ + M  R+  PN VTYNTL+  L K    ++
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E+   +  + + PD+ ++N  ++GLC  +    A E   +   +G  P   T+++L+ 
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464

Query: 617 AVMNNG 622
           ++ + G
Sbjct: 465 SLCSRG 470


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 175/497 (35%), Positives = 271/497 (54%), Gaps = 29/497 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E+A  FL  +  KG  PDVY+Y  VI+ L     L  A    +EM  R +  N
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y +LIDG  K G    A  +  +  M     P  VTYN +I+GLCK  R  E  ++ 
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSK--MRKKCVPTAVTYNSLISGLCKAERASEAYDLL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  +    D FTY + I G CK+   + A RV+ ++V  G   D VTY+ +IDG C+ 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 290 GKIKECFELWEVMGRKG-CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G++KE  +L+  M + G C+ N V+YN LI G    GK+DEA+++ E + E   + D  T
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L+NG CK                    RL DA  L+N+M + G   +  T  SLM+G
Sbjct: 259 YTTLMNGFCK------------------LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             + ++L +A+ +  EM RK CSPTV +YNT+++G C+  +  EA  F+ E  E    P+
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPN 358

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +++++++I GLC+  +   A++L  +  ++   PDV MY  +I GLC   KV++A ++Y 
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 528 NM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            M ++  C+PN +TY+TL+ GL   G  D+A       +E+   P+I +YN+ +      
Sbjct: 419 KMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKA 474

Query: 587 SRMSDAFEFLNDALCRG 603
           +R  DA E L+D + RG
Sbjct: 475 NRDEDARELLDDMVQRG 491



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 227/446 (50%), Gaps = 21/446 (4%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +V   S   + VTY  +I GLCK  R ++ L    +M       D +TY + IH LC   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            +  A +   EM    +  + VTY  +IDG C+ G++ E   L   M +K     V+YN 
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNS 120

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI GL +  +  EA  + E +    C  D  T+  LI G CK+   + A+++  ++   G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 376 -----------------EGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENA 417
                            EGRL +A  L  RM K G C  N  T NSL++GF +  K++ A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + L + M+  G SP VV+Y TL+NG CK+ R  +AY  + +M  KG  PD++T++ L++G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+  ++  A+ +  +  +K  +P V  YN ++ G C A ++E+A +    +++ +C PN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPN 358

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +V++N ++ GL K     +A+E+       R  PD++ Y   + GLC   ++ +A     
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 598 DALCR-GILPTTITWHILVRAVMNNG 622
             L   G LP +IT+  L+  + N G
Sbjct: 419 KMLEEPGCLPNSITYSTLITGLCNAG 444



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 202/392 (51%), Gaps = 26/392 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A   L  +   G  PD+++Y T+I G  KS     AL VF+++  RG   +
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LIDG  K+G    A +++ R++   S  PN VTYN +I+G C+ G+ DE + + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RM +     D  TY + ++G CK   ++ A  +  +M   G+  D VT+ +++DG CR 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   +   M RK C   V +YN ++ G     +++EA     +L E +C  +  + 
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSF 362

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I GLCK   +N++ + +  VEE    R               C  +     ++++G 
Sbjct: 363 NIMIRGLCK---VNRSSEAMELVEEARRRR---------------CNPDVVMYTTVIDGL 404

Query: 409 IQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +  K++ A  ++++M    GC P  ++Y+TLI GLC       A  ++    EKG  P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPN 460

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           + TY+LLI+   ++ + + A +L    +Q+GF
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 45/278 (16%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           S+I  + +    D+A+++ +RM E  G    ++         C+  + + A   LN +  
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAET-GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KGL PDV ++ ++++GL +   L  A+ +  EM  +     V  YN ++DG+ +      
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A++    ++ E    PNVV++N+MI GLCK  R  E +E+ +  ++     D   Y + I
Sbjct: 345 ARKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401

Query: 249 HGLCKAGNVEGAERVYREM--------------------------------VESGIFVDA 276
            GLC+   V+ A RVYR+M                                +E G   + 
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNI 461

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
            TYN +ID F +A + ++  EL + M ++G   V S+ 
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRGFGGVQSHQ 499


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 175/497 (35%), Positives = 271/497 (54%), Gaps = 29/497 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E+A  FL  +  KG  PDVY+Y  VI+ L     L  A    +EM  R +  N
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y +LIDG  K G    A  +  +  M     P  VTYN +I+GLCK  R  E  ++ 
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSK--MRKKCVPTAVTYNSLISGLCKAERASEAYDLL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  +    D FTY + I G CK+   + A RV+ ++V  G   D VTY+ +IDG C+ 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 290 GKIKECFELWEVMGRKG-CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G++KE  +L+  M + G C+ N V+YN LI G    GK+DEA+++ E + E   + D  T
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L+NG CK                    RL DA  L+N+M + G   +  T  SLM+G
Sbjct: 259 YTTLMNGFCK------------------LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             + ++L +A+ +  EM RK CSPTV +YNT+++G C+  +  EA  F+ E  E    P+
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPN 358

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +++++++I GLC+  +   A++L  +  ++   PDV MY  +I GLC   KV++A ++Y 
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 528 NM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            M ++  C+PN +TY+TL+ GL   G  D+A       +E+   P+I +YN+ +      
Sbjct: 419 KMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKA 474

Query: 587 SRMSDAFEFLNDALCRG 603
           +R  DA E L+D + RG
Sbjct: 475 NRDEDARELLDDMVQRG 491



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 227/446 (50%), Gaps = 21/446 (4%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +V   S   + VTY  +I GLCK  R ++ L    +M       D +TY + IH LC   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            +  A +   EM    +  + VTY  +IDG C+ G++ E   L   M +K     V+YN 
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNS 120

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI GL +  +  EA  + E +    C  D  T+  LI G CK+   + A+++  ++   G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 376 -----------------EGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENA 417
                            EGRL +A  L  RM K G C  N  T NSL++GF +  K++ A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + L + M+  G SP VV+Y TL+NG CK+ R  +AY  + +M  KG  PD++T++ L++G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+  ++  A+ +  +  +K  +P V  YN ++ G C A ++E+A +    +++ +C PN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPN 358

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +V++N ++ GL K     +A+E+       R  PD++ Y   + GLC   ++ +A     
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 598 DALCR-GILPTTITWHILVRAVMNNG 622
             L   G LP +IT+  LV  + N G
Sbjct: 419 KMLEEPGCLPNSITYSTLVTGLCNAG 444



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 202/392 (51%), Gaps = 26/392 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A   L  +   G  PD+++Y T+I G  KS     AL VF+++  RG   +
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LIDG  K+G    A +++ R++   S  PN VTYN +I+G C+ G+ DE + + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RM +     D  TY + ++G CK   ++ A  +  +M   G+  D VT+ +++DG CR 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   +   M RK C   V +YN ++ G     +++EA     +L E +C  +  + 
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSF 362

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I GLCK   +N++ + +  VEE    R               C  +     ++++G 
Sbjct: 363 NIMIRGLCK---VNRSSEAMELVEEARRRR---------------CNPDVVMYTTVIDGL 404

Query: 409 IQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +  K++ A  ++++M    GC P  ++Y+TL+ GLC       A  ++    EKG  P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPN 460

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           + TY+LLI+   ++ + + A +L    +Q+GF
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 180/592 (30%), Positives = 305/592 (51%), Gaps = 44/592 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A  F + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFTTLLHG-----LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  KKGD + A  +  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++Y+ +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ +  T   LI+G C    ++  +++L+E+ E G                 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   +  TC++L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI+GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +  LI+G C AG+V+D L+L+  M +R  V N +TY TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + G  K G+ + AL+I+  ++   + PD I+    L GL S   +  A   L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 284/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      + + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL  F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L +  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK------------------QNR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  N  T N+L++G+  A ++++ + L  EM+  G      +YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G   V     A   ++EM+  G  PD++T   L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A ++++ +  +   P+++++   + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             IT+  L+   R V N NGA
Sbjct: 615 NAITYITLICGFRKVGNINGA 635



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 225/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+  ++ G C   ++ E  + +  M    C  NVV++  L+ GL  
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITYS +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +P++  +N LI G C A +++D ++L   M +   V +  TYNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G +  GD + AL++   ++   L PDI++ +  L GLC   ++ DA E          
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P   T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEG 525



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +  L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             +  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I+P  + +  ++ ++  +G
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 12/184 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +  T   L      E  +  +  L+  +  R I P  + + S I  L +  +     D
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL----D 563

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
            A  +  + G  S     +     +N    C+AG      + +        +  +G+  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGY--CKAG------RVDDGLELFCEMGRRGIVAN 615

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             +Y T+I G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 195 RLVM 198
           +L M
Sbjct: 676 KLQM 679


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 170/528 (32%), Positives = 287/528 (54%), Gaps = 28/528 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           + C++ +  +A   L  + ++G   D+ +Y T+I GL     +  A  +F  M + G   
Sbjct: 19  MFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRP 78

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           + + Y  L+ G  + G    A  + + ++ +TS Y     P +V+Y+++I+GLCK  R D
Sbjct: 79  DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRRED 138

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E++  MK      D  +Y S IHG C++G  E A+ ++ EM++ GI  D  T + +I
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLI 198

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ GK+ E  EL EVM ++GC L++V+Y+ LI+GL    ++ EA  ++  +++  C 
Sbjct: 199 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCR 258

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG--CKLNAYT 400
            D+  +G L+ GLC+ G +N A+Q+  E              ++N   ++G  CK    +
Sbjct: 259 PDAIAYGTLMKGLCQTGNINTALQLHQE--------------MLNDTGRYGIKCKPTLIS 304

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            + +++G  +  + + A  LFKEM  +G  P V+SY TLI+G C   ++ +A     EML
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G +PD+ T S+LI+ LC+  K+  A KL    +Q+G  PDV     L+ GLC   ++ 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------RLRPDII 574
            A QL+  M+K  C+PN+VT  TLM GL ++G+   ALE+  ++L +        +P+ I
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           SY+I + GLC C R  +A E   +    G++P  I++  L+     +G
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 532



 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 175/584 (29%), Positives = 300/584 (51%), Gaps = 72/584 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+ ++A+     +  +G+ PDV SY ++I+G  +SG    A  +F+EM + G+ ++
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V   ++LID   K+G  + A E+ E ++    +  ++VTY+ +I GLC   R  E   ++
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMKHRISEATRLF 249

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIF-----VDAVTYNAMI 283
             M+K     D+  Y + + GLC+ GN+  A ++++EM+ ++G +        ++Y+ +I
Sbjct: 250 MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIII 309

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG C+  +  E  EL++ M  +G + +V+SY  LI G   +GK ++A  ++  + +    
Sbjct: 310 DGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 369

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
            D TT  VLI+ LCK G + +A ++L  V + G                 + R++ A  L
Sbjct: 370 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLE----------------------NAIF---- 419
             +M K GC  N  TC +LM G  Q+  ++                      NAI     
Sbjct: 430 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489

Query: 420 ---------------LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
                          LFKEM   G  P V+SY +LI+G C+  ++ +A     EM++ G 
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +PD+ T+S+LI+ LC+  K+  A +L    +Q+G  P+   Y  L+ GLC   ++ +A Q
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 609

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------RLRPDIISYNI 578
           L+  M+K  C+P++VTY TLM GL +TG+   ALE+   +L +        +PD+ISY+I
Sbjct: 610 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 669

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + GLC   R  +A E   +    G++P  I++  L+     +G
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSG 713



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 279/555 (50%), Gaps = 70/555 (12%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           ILC++ +  +A   L  + ++G   D+ +Y T+I GL     +  A  +F  M + G   
Sbjct: 200 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRP 259

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           + + Y  L+ G  + G+   A ++ + ++ +T  Y     P +++Y+++I+GLCK  R D
Sbjct: 260 DAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E++  MK      D  +Y + IHG C +G  E A+ ++ EM++ GI  D  T + +I
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ GK+ E  +L EV+ ++GC+ +VV+   L++GL    ++ +A  ++  +++  C 
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 439

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQI----LNEVEEGGE-------------------GRL 379
            +  T   L+ GLC++G +  A+++    L++    G                    GR 
Sbjct: 440 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 499

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS-------------- 425
            +A  L   M   G   +  +  SL++GF ++ K ++A +LF EM               
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559

Query: 426 ---------------------RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
                                ++GC P  V+Y TL+ GLC  +R  EA     +M + G 
Sbjct: 560 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 619

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFL----QKG--FTPDVTMYNILIHGLCSAGK 518
            PD++TY  L+ GLCQ+  I  AL+L  + L    Q G  F PDV  Y+I+I GLC  G+
Sbjct: 620 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGR 679

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            ++A +L+  MK    +PN+++Y +L+ G  ++G  + A  ++N ++++ ++ + ++Y++
Sbjct: 680 EDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSV 739

Query: 579 TLKGLCSCSRMSDAF 593
            + G C   ++  A 
Sbjct: 740 MIHGFCKEGQIDKAL 754



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 226/456 (49%), Gaps = 30/456 (6%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++   + P+V T  V+I+  CK G+  E  E+ + M +     D  TY + I GLC    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-------GRKGCLN 309
           +  A +++  M + G   DA+ Y  ++ G C+ GKI     L + M       G K    
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +VSY+I+I GL ++ + DEA  +++ ++ +    D  ++  LI+G C++G   KA  + N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E+ + G                 EG++ +A  L+  M + GC L+  T ++L+ G     
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW------KP 466
           ++  A  LF  M + GC P  ++Y TL+ GLC+      A    +EML          KP
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            +I+YS++I+GLC+ ++ D A +L  +   +G  PDV  Y  LIHG C +GK E A  L+
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + M      P++ T + L+D L K G   +A ++   +++    PD+++    +KGLC  
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+S A +        G +P  +T   L++ +  +G
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 456



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 64/375 (17%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC+K +  +A + L  + ++G  PDV +  T++ GL     +  A  +F +M + G   
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           NVV    L+ G  + G+   A E+ + ++ +TS Y     PN ++Y+++I+GLCKCGR D
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E++  MK      D  +Y S IHG C++G  + A+ ++ EMV+ G+  D  T++ +I
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ GK+ E  EL EVM ++GC+ N V+Y  L++GL  N ++ EA  ++  +++  C 
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620

Query: 343 ADSTTHG-----------------------------------------VLINGLCKNGYL 361
            D  T+G                                         ++I+GLCK+G  
Sbjct: 621 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 680

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           ++A ++  E++  G                  G+L DA  L N M   G +LNA T + +
Sbjct: 681 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740

Query: 405 MNGFIQASKLENAIF 419
           ++GF +  +++ A+F
Sbjct: 741 IHGFCKEGQIDKALF 755



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 131/237 (55%), Gaps = 14/237 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I  + ++     A  +F  M +I        F     +LC++ +  +A   L  + ++
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  +Y T++ GL  +  +  A  +F +M + G   +VV Y  L+ G  + G+   A
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 190 KEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            E+ ++++ +T  Y     P+V++Y+++I+GLCK GR DE  E++  MK      +  +Y
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI-KECFELWE 300
            S IHG C++G +E A+ ++ EMV+ G+ ++AVTY+ MI GFC+ G+I K  F+  E
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKME 759



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 21/198 (10%)

Query: 54  VVHVSRILELIEIQKCYCPEDVA-LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--- 109
           V+  + +LE++ IQ+   P  V   ++++    N    +A  +F +M ++ GC   +   
Sbjct: 569 VIEANELLEVM-IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL-GCLPDVVTY 626

Query: 110 ------LCR----KRQFEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAV 157
                 LC+    K   E  K+ L+   + G   KPDV SY  +I+GL K G    A  +
Sbjct: 627 GTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 686

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           F EM   GV  NV+ Y  LI GF + G    AK ++  +V +  V  N VTY+VMI+G C
Sbjct: 687 FKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV-DQGVQLNAVTYSVMIHGFC 745

Query: 218 KCGRFDECLEMWDRMKKN 235
           K G+ D+ L  + +M+ N
Sbjct: 746 KEGQIDKAL--FQKMEAN 761


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  297 bits (761), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 197/666 (29%), Positives = 317/666 (47%), Gaps = 85/666 (12%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A RL NL                 +++P ++  P L+  IL RL        + +ILE 
Sbjct: 65  AALRLFNLA----------------SKKPNFSPEPALYEEILLRLGRSGSFDDMKKILED 108

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------------- 107
           ++  +C       L +I++Y +  + D+ L V   M + FG +                 
Sbjct: 109 MKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN 168

Query: 108 ---------------GI-------------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
                          GI             LCR  Q   A   L  +   GL PD  ++ 
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           TV+ G ++ GDL GAL + ++M E G   + V  N+++ GF K+G    A    + +  +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
              +P+  T+N ++NGLCK G     +E+ D M +   + D +TY S I GLCK G V+ 
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A  V  +M+      + VTYN +I   C+  +++E  EL  V+  KG L +V ++N LI+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL        A+ ++E +R K C  D  T+ +LI+ LC  G L++A+ +L +        
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-------- 460

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                     M+  GC  +  T N+L++GF +A+K   A  +F EM   G S   V+YNT
Sbjct: 461 ----------MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+GLCK  R  +A   + +M+ +G KPD  TY+ L+   C+   I  A  +       G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSN--MKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
             PD+  Y  LI GLC AG+VE A +L  +  MK  N  P+   YN ++ GLF+     +
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTE 628

Query: 557 ALEIWNHILEE-RLRPDIISYNITLKGLCS-CSRMSDAFEFLNDALCRGILPTTITWHIL 614
           A+ ++  +LE+    PD +SY I  +GLC+    + +A +FL + L +G +P   + ++L
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688

Query: 615 VRAVMN 620
              ++ 
Sbjct: 689 AEGLLT 694



 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 180/634 (28%), Positives = 315/634 (49%), Gaps = 41/634 (6%)

Query: 7   RLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI 66
           +LL+ L+++ +   AL LF+ A+++P ++  P L+  IL RL        + +ILE ++ 
Sbjct: 52  KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKR------------ 114
            +C       L +I++Y +  + D+ L V   M + FG +       R            
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171

Query: 115 --QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             +   AK    S+W  G+KPDV ++  +I  L ++  L  A+ + ++M   G+  +   
Sbjct: 172 LVEISHAKM---SVW--GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +  ++ G+ ++GD   A  I E++V     + NV + NV+++G CK GR ++ L     M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEM 285

Query: 233 KKNERE-KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
              +    D +T+ + ++GLCKAG+V+ A  +   M++ G   D  TYN++I G C+ G+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +KE  E+ + M  + C  N V+YN LI  L +  +V+EA  +  +L  K    D  T   
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI GLC       A+++  E                  M   GC+ + +T N L++    
Sbjct: 406 LIQGLCLTRNHRVAMELFEE------------------MRSKGCEPDEFTYNMLIDSLCS 447

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             KL+ A+ + K+M   GC+ +V++YNTLI+G CK  +  EA     EM   G   + +T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI+GLC+S++++ A +L  Q + +G  PD   YN L+   C  G ++ A  +   M 
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
              C P++VTY TL+ GL K G  + A ++   I  + +     +YN  ++GL    + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627

Query: 591 DAFEFLNDALCRG-ILPTTITWHILVRAVMNNGA 623
           +A     + L +    P  +++ I+ R + N G 
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 225/476 (47%), Gaps = 36/476 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++  + K    + AL+  Q M+           F      LC+    + A   ++ + ++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PDVY+Y +VI+GL K G++  A+ V D+M  R    N V YN LI    K+     A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E+  R++    + P+V T+N +I GLC        +E+++ M+    E D FTY   I 
Sbjct: 385 TELA-RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
            LC  G ++ A  + ++M  SG     +TYN +IDGFC+A K +E  E+++ M   G   
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N V+YN LI GL ++ +V++A  + + +  +    D  T+  L+   C+ G + KA  I+
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             +   G                  GR+  A+ L+  +   G  L  +  N ++ G  + 
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623

Query: 412 SKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVE-RFGEAYSFVKEMLEKGWKPDMI 469
            K   AI LF+EM  +    P  VSY  +  GLC       EA  F+ E+LEKG+ P+  
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKG-FT-PDVTMYNILIHGLCSAGKVEDAL 523
           +  +L  GL      +  +KL    +QK  F+  +V+M    + GL    K +DAL
Sbjct: 684 SLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSM----VKGLLKIRKFQDAL 735


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  297 bits (761), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 304/592 (51%), Gaps = 44/592 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A    + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFTTLLHG-----LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  KKGD + A  +  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++Y+ +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ +  T   LI+G C    ++  +++L+E+ E G                 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   +  TC++L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI+GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +  LI+G C AG+V+D L+L+  M +R  V N +TY TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + G  K G+ + AL+I+  ++   + PD I+    L GL S   +  A   L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 285/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      + + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L +  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK------------------QNR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  N  T N+L++G+  A ++++ + L  EM+  G      +YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G   V     A   ++EM+  G  PD++T   L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A ++++ +  +   P+++++   + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             IT+  L+   R V N NGA
Sbjct: 615 NAITYITLICGFRKVGNINGA 635



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 225/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+  ++ G C   ++ E   L+  M    C  NVV++  L+ GL  
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITYS +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +P++  +N LI G C A +++D ++L   M +   V +  TYNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G +  GD + AL++   ++   L PDI++ +  L GLC   ++ DA E          
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P   T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEG 525



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 249/536 (46%), Gaps = 55/536 (10%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVS---------RILELIEI-----QKCYCPEDVA 76
           E   + + +LFH +      P +V   +         RI+E + +     +    P  + 
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 77  L-SVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSL 126
             +++    K      AL++ ++M E         I+      LC+  +   A+     +
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            EKG+ PD+++Y ++I G   SG    A  +  EM ER +  +VV YN LI+ F K+G +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+E+++ + +   + PN +TY+ MI+G CK  R D    M+  M       +  T+ +
Sbjct: 342 FEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I G C A  ++    +  EM E+G+  D  TYN +I GF   G +    +L + M   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 307 -CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST-----------THGVLING 354
            C ++V+ + L+ GL +NGK+ +A+ +++++++   + D++           T+ +LI+G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L                    EG+  +A  L   M   G   +  T +S+++G  + S+L
Sbjct: 521 LIN------------------EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +F  M  K  SP VV++ TLING CK  R  +      EM  +G   + ITY  L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           I G  +   I+ AL +  + +  G  PD      ++ GL S  +++ A+ +   ++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +  L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I+P  + +  ++ ++  +G
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 12/184 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +  T   L      E  +  +  L+  +  R I P  + + S I  L +  +     D
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL----D 563

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
            A  +  + G  S     +     +N    C+AG      + +        +  +G+  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGY--CKAG------RVDDGLELFCEMGRRGIVAN 615

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             +Y T+I G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 195 RLVM 198
           +L M
Sbjct: 676 KLQM 679


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 328/648 (50%), Gaps = 33/648 (5%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           + LL  L+ + +P  AL + ++A     +A  P ++  I+R+L        + ++L + E
Sbjct: 45  EELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVL-VTE 103

Query: 66  IQK--CYCPEDVALSVIQAYGKNSMPDKALD-VFQRMNEIFGCEA---------GILCRK 113
           +++        V  S +++Y +  +   A+D V  +++ +FG +A          +L   
Sbjct: 104 MRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEG 163

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + +  +   + + E+G+KPDV ++ T++  L ++  +  A+ + +EM   GV  +   +
Sbjct: 164 SKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTF 223

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             L+ GF ++G    A  +  R+ +E    P  VT NV+ING CK GR ++ L    +  
Sbjct: 224 TTLMQGFVEEGSIKAALRVKARM-LEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            N  E D  TY +F++GLC+ G+V  A +V   MV+ G   D  TYN +++  C+ G+++
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   +   M  +GCL ++ ++N LI  L    +++EA+ +   +  K  + D  T  +LI
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           N LCK G    A+++  E++  G                  G+L  A  L+  M+  GC 
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T N++++G  +  ++E A  +F +M  +G S   +++NTLI+GLCK +R  +A   
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + +M+ +G +P+ ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC 
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCK 582

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           AG+ + AL+L   M+ +        YN ++  LF+  +   A+ ++  + E    PD  +
Sbjct: 583 AGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFT 642

Query: 576 YNITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y I  +GLC     + +AF+FL + + +G +P   ++ +L   ++N G
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 8/154 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++  Y K     KA D+ Q M           +G     LC+  + + A + L  +  K
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++    +Y  VI  L +  +   A+ +F EM E G   +   Y I+  G  + G  +R 
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIRE 659

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
              +   +++    P   ++ ++  GL   G  D
Sbjct: 660 AFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 693


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 304/592 (51%), Gaps = 44/592 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A    + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFNTLLHG-----LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  KKGD + A  +  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++Y+ +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ +  T   LI+G C    ++  +++L+E+ E G                 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   +  TC++L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI+GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +  LI+G C AG+V+D L+L+  M +R  V N +TY TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + G  K G+ + AL+I+  ++   + PD I+    L GL S   +  A   L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 285/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      + + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L +  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK------------------QNR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  N  T N+L++G+  A ++++ + L  EM+  G      +YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G   V     A   ++EM+  G  PD++T   L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A ++++ +  +   P+++++   + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             IT+  L+   R V N NGA
Sbjct: 615 NAITYITLICGFRKVGNINGA 635



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+N ++ G C   ++ E   L+  M    C  NVV++  L+ GL  
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITYS +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +P++  +N LI G C A +++D ++L   M +   V +  TYNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G +  GD + AL++   ++   L PDI++ +  L GLC   ++ DA E          
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P   T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEG 525



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 249/536 (46%), Gaps = 55/536 (10%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVS---------RILELIEI-----QKCYCPEDVA 76
           E   + + +LFH +      P +V   +         RI+E + +     +    P  + 
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 77  L-SVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSL 126
             +++    K      AL++ ++M E         I+      LC+  +   A+     +
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            EKG+ PD+++Y ++I G   SG    A  +  EM ER +  +VV YN LI+ F K+G +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+E+++ + +   + PN +TY+ MI+G CK  R D    M+  M       +  T+ +
Sbjct: 342 FEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I G C A  ++    +  EM E+G+  D  TYN +I GF   G +    +L + M   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 307 -CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST-----------THGVLING 354
            C ++V+ + L+ GL +NGK+ +A+ +++++++   + D++           T+ +LI+G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L                    EG+  +A  L   M   G   +  T +S+++G  + S+L
Sbjct: 521 LIN------------------EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +F  M  K  SP VV++ TLING CK  R  +      EM  +G   + ITY  L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           I G  +   I+ AL +  + +  G  PD      ++ GL S  +++ A+ +   ++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +N L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I+P  + +  ++ ++  +G
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 12/184 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +  T   L      E  +  +  L+  +  R I P  + + S I  L +  +     D
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL----D 563

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
            A  +  + G  S     +     +N    C+AG      + +        +  +G+  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGY--CKAG------RVDDGLELFCEMGRRGIVAN 615

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             +Y T+I G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 195 RLVM 198
           +L M
Sbjct: 676 KLQM 679


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 281/495 (56%), Gaps = 27/495 (5%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +PDVY+Y  ++ G  + G++  A   FDEM  + +  NV   +ILIDG  K    + A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
            + R +  + +  + V Y  +++GL K  R D+ L +   M+ +  E +  TY S I GL
Sbjct: 66  CF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKG---- 306
           CK    + A+ ++  M         VTYN ++DG  R GK++    L+ E++ R+     
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 307 ---CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
                NV++Y++LI GL +  +V +A+ + E ++ + C+ D  T+ +L++GLCK   +  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A ++L E+ + G                  C  N  T NSL++G  +A ++ +A+ L ++
Sbjct: 245 AWEVLREMLDAG------------------CVPNLVTYNSLLHGLCRARRVSDALALMRD 286

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M+ +GC+P VV+Y TLI+GLCKV R  +A + + +M++KG  PD++ Y++LINGLC++ +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D ++ L  + +  G  PDV  Y+ +I+GLC + ++++A +L   +K R C P+++ Y+T
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DGL K G  D+A +++  +  +    D+++Y+  + GLC   R+ +A   L   +  G
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466

Query: 604 ILPTTITWHILVRAV 618
             P+T+T++ L++ +
Sbjct: 467 TPPSTMTYNSLIKGL 481



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/519 (31%), Positives = 281/519 (54%), Gaps = 30/519 (5%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++++ ++A   L+ + + G +P+V +Y ++I+GL K+ +   A  +F+ M       ++V
Sbjct: 91  KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLV------METSVYPNVVTYNVMINGLCKCGRFDEC 225
            YN L+DG F+ G   RA  +++ ++      M+    PNV+TY+V+I+GLCK  R  + 
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           +E+ + MK      D  TY   + GLCK   V  A  V REM+++G   + VTYN+++ G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            CRA ++ +   L   M  +GC  NVV+Y  LI GL + G+V +A ++   + +K    D
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
              + +LINGLCK   ++++I +L     GG                   K +  T +S+
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGG------------------IKPDVVTYSSV 372

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G  ++++L+ A  L   +  +GC P V+ Y+TLI+GLCK  +  EA+   + M   G 
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
             D++TYS LI+GLC++ ++D A  L  + ++ G  P    YN LI GLC    +++A++
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH-----ILEERLRPDIISYNIT 579
           L   M++ NC P+ VTYN L+ G+ +    D A+ +        +       D I+Y+  
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + GLC   R+++A ++  + +  G++P  IT+ IL+  +
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 279/566 (49%), Gaps = 40/566 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           ++++ + +    D+A   F  M        +F C   I  LC+ ++   A R   ++   
Sbjct: 14  ALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGS 73

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  D   Y  +++GL K   L  ALA+  EM + G E NVV YN LIDG  K  +  RA
Sbjct: 74  GIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRA 133

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL----EMWDRMKKNEREKDS---F 242
           +E++E +       P++VTYN +++GL + G+ +  +    EM DR   +  ++ S    
Sbjct: 134 QELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I GLCKA  V  A  +   M   G   D +TY  ++DG C+  K+   +E+   M
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC+ N+V+YN L+ GL    +V +A+++   +  + C  +  T+G LI+GLCK    
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK---- 308

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          GR+ DA +++  M   G   +    N L+NG  +A +++ +I L 
Sbjct: 309 --------------VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +     G  P VV+Y+++I GLC+  R  EA   +  +  +G  PD+I YS LI+GLC++
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K+D A  L       G   DV  Y+ LI GLC AG+V++A  L + M +    P+ +TY
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N+L+ GL      D+A+E+   +      P  ++YNI + G+C   R+  A   L  A  
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534

Query: 602 R-----GILPTTITWHILVRAVMNNG 622
           R     G    TI +  L+  +   G
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAG 560



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 223/420 (53%), Gaps = 12/420 (2%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V TY  ++ G C+ G  D+    +D M+      + F     I GLCKA     A R 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           +R M  SGI  D V Y A++ G  +  ++ +   +   M   GC  NVV+YN LI GL +
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           N + D A  ++E ++   C+    T+  L++GL + G L +A+ +  E+ +     + D 
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                      C  N  T + L++G  +A+++  A+ L + M  +GCSP V++Y  L++G
Sbjct: 187 -----------CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK  +   A+  ++EML+ G  P+++TY+ L++GLC+++++  AL L      +G TP+
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  Y  LI GLC  G+V+DA  + ++M  +   P+L+ YN L++GL K    D+++ +  
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +   ++PD+++Y+  + GLC  +R+ +A   L     RG  P  I +  L+  +   G
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 34/403 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A   L S+  +G  PDV +Y  +++GL K   +  A  V  EM + G   N
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFDE 224
           +V YN L+ G        RA+ + + L +   +      PNVVTY  +I+GLCK GR  +
Sbjct: 261 LVTYNSLLHGLC------RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 314

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              M   M       D   Y   I+GLCKA  V+ +  + R  V  GI  D VTY+++I 
Sbjct: 315 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 374

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G CR+ ++ E   L   +  +GC  +V+ Y+ LI GL + GKVDEA  ++E++    C+A
Sbjct: 375 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDA 434

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLV 386
           D  T+  LI+GLCK G +++A  +L  +   G                    L +A  LV
Sbjct: 435 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 494

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-----GCSPTVVSYNTLIN 441
             M++  C  +A T N L++G  +  ++++A+ L ++   +     G +   ++Y++LI+
Sbjct: 495 EEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLID 554

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           GLCK  R  EA  + +EM++ G  PD ITYS+L+ GL +SK +
Sbjct: 555 GLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 304/592 (51%), Gaps = 44/592 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A    + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFNTLLHG-----LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  KKGD + A  +  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++Y+ +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ +  T   LI+G C    ++  +++L+E+ E G                 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   +  TC++L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI+GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +  LI+G C AG+V+D L+L+  M +R  V N +TY TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + G  K G+ + AL+I+  ++   + PD I+    L GL S   +  A   L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 285/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      L + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L +  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK------------------QNR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  N  T N+L++G+  A ++++ + L  EM+  G      +YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G   V     A   ++EM+  G  PD++T   L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A ++++ +  +   P+++++   + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             IT+  L+   R V N NGA
Sbjct: 615 NAITYITLICGFRKVGNINGA 635



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+N ++ G C   ++ E   L+  M    C  NVV++  L+ GL  
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITYS +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +P++  +N LI G C A +++D ++L   M +   V +  TYNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G +  GD + AL++   ++   L PDI++ +  L GLC   ++ DA E          
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P   T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEG 525



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 249/536 (46%), Gaps = 55/536 (10%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVS---------RILELIEI-----QKCYCPEDVA 76
           E   + + +LFH +      P +V   +         RI+E + +     +    P  + 
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 77  L-SVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSL 126
             +++    K      AL++ ++M E         I+      LC+  +   A+     +
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            EKG+ PD+++Y ++I G   SG    A  +  EM ER +  +VV YN LI+ F K+G +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+E+++ + +   + PN +TY+ MI+G CK  R D    M+  M       +  T+ +
Sbjct: 342 FEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I G C A  ++    +  EM E+G+  D  TYN +I GF   G +    +L + M   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 307 -CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST-----------THGVLING 354
            C ++V+ + L+ GL +NGK+ +A+ +++++++   + D++           T+ +LI+G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L                    EG+  +A  L   M   G   +  T +S+++G  + S+L
Sbjct: 521 LIN------------------EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +F  M  K  SP VV++ TLING CK  R  +      EM  +G   + ITY  L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           I G  +   I+ AL +  + +  G  PD      ++ GL S  +++ A+ +   ++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +N L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I+P  + +  ++ ++  +G
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 12/184 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +  T   L      E  +  +  L+  +  R I P  + + S I  L +  +     D
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL----D 563

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
            A  +  + G  S     +     +N    C+AG      + +        +  +G+  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGY--CKAG------RVDDGLELFCEMGRRGIVAN 615

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             +Y T+I G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 195 RLVM 198
           +L M
Sbjct: 676 KLQM 679


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/646 (27%), Positives = 324/646 (50%), Gaps = 31/646 (4%)

Query: 7   RLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI 66
           RLL  L+ + +P  AL + +SA     +A S  ++  I+++L        +  ++  +  
Sbjct: 58  RLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVF--QRMNEIFGCEA---------GILCRKRQ 115
           +       V  S +++Y +    D A+D+   Q  N+ FG +A          +L    +
Sbjct: 118 EGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSK 177

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +  +   N +  +G++PDV +  T+I  L ++  +  A+ + +EM   GV  +   +  
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTT 237

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ GF ++G    A  +  ++ ME    P  VT NV+ING CK GR ++ L    +   +
Sbjct: 238 LMQGFIEEGSIEAALRVKAKM-MEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  TY +F+HGLC+ G+V  A +V   M++ G   D  TYN +I+   + G++ E 
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M  +GCL +  ++N LI  L    +++EA+ +   L  K  + D  T  +LIN 
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LCK G  +  I++  E++  G                  G+L +A  L+N M+ +GC  +
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N++++   +  ++E A  +F +M  +G S + V++NTLI+GLCK +R  +A   ++
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+++G +P+ ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC AG
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + + AL+L   M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y 
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYK 656

Query: 578 ITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  + LC     + +AF+FL + + +G +P   ++ +L   ++N G
Sbjct: 657 IVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 24/305 (7%)

Query: 50  DPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY----GKNSMPDKALDVFQRMNEIFGC 105
           DP L +   R+ E ++   C  P++V  +++  +    GK      ALD+   M E  GC
Sbjct: 422 DPHLGI---RLFEEMKSSGC-TPDEVTYNILIDHLCSMGKLG---NALDLLNEM-ESNGC 473

Query: 106 EAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                        LC+K + E+A+   + +  +G+     ++ T+I+GL K+  +  A  
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + ++M + G++ N + YN ++  + K+G+  +A +I E +        +VVTY  +INGL
Sbjct: 534 LIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA-NGFEIDVVTYGTLINGL 592

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK GR    L++   M+          Y   I  L +  N+  A  ++REM E G   DA
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 277 VTYNAMIDGFCRAG-KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
           +TY  +    CR G  IKE F+    M  KG +    S+ +L  GLL  G  D  IS  E
Sbjct: 653 LTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIE 712

Query: 335 LLREK 339
           L+ EK
Sbjct: 713 LIIEK 717



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 39/226 (17%)

Query: 402 NSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           + L+    + S  E A+  L   ++R+  +P+   Y  ++  L     F      V+EM 
Sbjct: 57  DRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMR 116

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK---GFTPDVTMYNILIHGLCSAG 517
            +G +   +     +    + ++ D A+ L    L     G   D  ++N L++ L    
Sbjct: 117 REGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGS 176

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           K++    +Y+ M  R                                    ++PD+++ N
Sbjct: 177 KLKLLESVYNEMTGRG-----------------------------------IQPDVVTLN 201

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             +K LC   ++  A   L +    G+ P   T+  L++  +  G+
Sbjct: 202 TLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/525 (32%), Positives = 274/525 (52%), Gaps = 36/525 (6%)

Query: 91  KALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           +ALD+F +M       F      LCR+ +  +A   L+ + E GL+P+  +YGT+++G+ 
Sbjct: 165 EALDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 224

Query: 147 KSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           K GD + AL +  +M E   ++ NVV Y+ +IDG +K G +  A  ++  +  E  ++P+
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM-QEKGIFPD 283

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           + TYN MI+G C  GR+ E   +   M + +   +  TY + I+   K      AE +Y 
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           EM+  GI  + +TYN+MIDGFC+  ++     ++ VM  KGC  +V ++N LI G     
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK 403

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           ++D+   +   + E    AD+TT+  LI+G C  G LN A+                   
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD------------------ 445

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-----------GCSPTV 433
           L  +M   G   +  TCN+L++G     KL++A+ +FK M +            G  P V
Sbjct: 446 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDV 505

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +YN LI+GL    +F EA    KEM  +G  P+ ITYS +INGLC+  ++D A ++   
Sbjct: 506 QTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              K F+PDV  +N L+ G C AG+V+D L+L+  M +R  V + +TY TL+ G  K G+
Sbjct: 566 MGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGN 625

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            + AL+I+  ++   + PD I+    L  L S   +  A   L D
Sbjct: 626 INGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 286/568 (50%), Gaps = 50/568 (8%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D+ +S+ Q   +  +P    DV+   N +  C     C   +   A      + + G +P
Sbjct: 94  DLVISLYQKMERKQIP---CDVYS-FNILIKC----FCSCSKLPFALSTFGKITKLGFQP 145

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           DV ++ T+++GL     +  AL +F +M       NVV +  L++G  ++G  + A  + 
Sbjct: 146 DVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALL 201

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLC 252
           +R+V E  + PN +TY  +++G+CK G     L +  +M++    K +   Y + I GL 
Sbjct: 202 DRMV-EDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLW 260

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K G    A  +Y EM E GIF D  TYN MIDGFC +G+  E   L  E++ RK   NVV
Sbjct: 261 KDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVV 320

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI   ++  K  EA  +++ +  +    ++ T+  +I+G CK              
Sbjct: 321 TYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK-------------- 366

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               + RL  A  +   M   GC  + +T N+L++G+  A ++++   L  EM+  G   
Sbjct: 367 ----QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +YNTLI+G C V     A    ++M+  G  PD++T + L++GLC + K+  AL++ 
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 482

Query: 492 CQFLQK------------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            + +QK            G  PDV  YNILI GL + GK  +A +LY  M  R  VPN +
Sbjct: 483 -KAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTI 541

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY+++++GL K    D+A ++++ +  +   PD++++N  + G C   R+ D  E   + 
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM 601

Query: 600 LCRGILPTTITWHILV---RAVMN-NGA 623
             RGI+   IT+  L+   R V N NGA
Sbjct: 602 GRRGIVADAITYITLIHGFRKVGNINGA 629



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 292/589 (49%), Gaps = 49/589 (8%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I           KC+C        +  +GK +      
Sbjct: 86  VVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQP 145

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A      L+ +  +P+V ++ T++NGL + G ++ 
Sbjct: 146 DVVTFSTLLHG-----LCVEDRVSEAL----DLFHQMCRPNVVTFTTLMNGLCREGRVVE 196

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++ N + Y  ++DG  K GD + A  +  ++   + + PNVV Y+ +I
Sbjct: 197 AVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAII 256

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +GL K GR  +   ++  M++     D FTY   I G C +G    A+R+ +EM+E  I 
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            + VTY+A+I+ + +  K  E  EL++ M  +G + N ++YN +I G  +  ++D A  +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           + ++  K C+ D  T   LI+G C                  G  R+ D   L++ M + 
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYC------------------GAKRIDDGTELLHEMTET 418

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   +  T N+L++GF     L  A+ L ++M   G  P +V+ NTL++GLC   +  +A
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478

Query: 453 YSFVKEMLEK-----------GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
               K M +            G +PD+ TY++LI+GL    K   A +L  +   +G  P
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   Y+ +I+GLC   ++++A Q++ +M  ++  P++VT+NTL+ G  K G  D  LE++
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
             +    +  D I+Y   + G      ++ A +   + +  G+ P TIT
Sbjct: 599 CEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTIT 647



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 225/448 (50%), Gaps = 32/448 (7%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V+ +N ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 75  PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           + ++ + G   D VT++ ++ G C   ++ E  +L+  M R    NVV++  L+ GL   
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRP---NVVTFTTLMNGLCRE 191

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           G+V EA+++ + + E     +  T+G +++G+CK G    A+ +L ++EE          
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +GR +DA +L   M + G   + +T N +++GF  + +   A  L +EM 
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +  +P VV+Y+ LIN   K  +F EA     EML +G  P+ ITY+ +I+G C+  ++D
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +      KG +PDV  +N LI G C A +++D  +L   M +   V +  TYNTL+
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN-------- 597
            G    GD + AL++   ++   + PDI++ N  L GLC   ++ DA E           
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 598 -DA--LCRGILPTTITWHILVRAVMNNG 622
            DA     G+ P   T++IL+  ++N G
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEG 519



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA  L + M +     +    N LM   ++  + +  I L+++M RK     V S+N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI   C   +   A S   ++ + G++PD++T+S L++GLC   ++  AL L  Q  +  
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+V  +  L++GLC  G+V +A+ L   M +    PN +TY T++DG+ K GD   AL
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 559 EIWNHILE-ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +   + E   ++P+++ Y+  + GL    R SDA     +   +GI P   T++ ++  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 618 VMNNG 622
             ++G
Sbjct: 294 FCSSG 298



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 5/220 (2%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+V+ +N L+  + ++ER     S  ++M  K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D+ ++++LI   C   K+  AL    +  + GF PDV  ++ L+HGLC   +V +AL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M    C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P+ I+Y   + G+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A   L        I P  + +  ++  +  +G
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDG 263



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           M + A R  N    E +  T   L      E  +  +  L+  +  R I P  + + S I
Sbjct: 490 MDLDASRPFN--GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSM-PDKALDVFQRMNEIFGCEAGILCRKRQFEKA 119
             L +  +     D A  +  + G  S  PD            F       C+  + +  
Sbjct: 548 NGLCKQSRL----DEATQMFDSMGSKSFSPDVV---------TFNTLVSGYCKAGRVDDG 594

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                 +  +G+  D  +Y T+I+G  K G++ GAL +F EM   GV  + +    ++  
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654

Query: 180 FFKKGDYMRAKEIWERLVM 198
            + K +  RA  + E L M
Sbjct: 655 LWSKEELKRAVAMLEDLQM 673


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 293/563 (52%), Gaps = 58/563 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E+A   + S+ +KG+ PDV +Y  +++   K+  +  AL +   M  RG   N
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 464

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY-------------------- 209
           VV +N +IDG  K      A ++++ + ++  + P+ +TY                    
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524

Query: 210 -----------NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                      N  INGL K G     L++++RM + E   D  T+   I G CKAGN E
Sbjct: 525 DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A  ++ EMV   +  D +T+ A+IDG C+AG+++   ++ ++MG  G   NVV+YN L+
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            GL ++G+++EA    E +    C  DS T+G L+  LC+    + A+Q+++E++  G  
Sbjct: 645 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G+   A +++  M   G   +  T N+L++   +A  LE A  L
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 421 FKEMSRK---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK--PDMITYSLLI 475
             +MS +    C P VV+Y+ LINGLCKV R  EA   ++EM+ K     P++ITY+  +
Sbjct: 765 HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824

Query: 476 NGLCQSKKIDMALKLCCQFLQKG---FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           +GLC+   +  A +L  + L+ G    +PD   ++ LI GLC  G+ ++A  ++ +M   
Sbjct: 825 DGLCKQSMMAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             VPN+VTYN LM+GL KT   ++A  +   ++++ + PD+I+Y++ +   C  S + +A
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943

Query: 593 FEFLNDALCRGILPTTITWHILV 615
            E L+    RG  P  +T++ ++
Sbjct: 944 LELLHGMASRGCTPNVVTFNSII 966



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 201/691 (29%), Positives = 328/691 (47%), Gaps = 77/691 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           + S  + LNLL    +P  A+ LF S  R P      H  +  L R    K    V R L
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRS--RLPPRCRPNHFTYSTLLRAT-YKAGGDVERTL 167

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
                 +         + V+Q+  +     +AL++F+      G    I         LC
Sbjct: 168 GFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 227

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +  +          L E+G  PDV +Y T+I+ L K+GDL  A  +  +M  R    NVV
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYN-------------------- 210
            Y++LI+G  K G    A+E+ + +  ++  V PN++TYN                    
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347

Query: 211 -----------------VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
                             +I+GLCKCG+ DE   ++D M       +  TY + ++GLCK
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
           A  +E A  +   MV+ G+  D +TY+ ++D FC+A ++ E  EL   M  +GC  NVV+
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467

Query: 313 YNILIRGLLENGKVDEAISIWELLREKN-CNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +N +I GL ++ +  EA  +++ +  K+    D  T+  LI+GL + G   +A  +L+ +
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527

Query: 372 EE----------GGEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
            +           G  +L D   A  + NRM +     +  T N L+ G  +A   E A 
Sbjct: 528 PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF+EM  K   P V+++  LI+GLCK  +   A   +  M   G  P+++TY+ L++GL
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647

Query: 479 CQSKKIDMALKLCCQFLQK----GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           C+S +I+ A    CQFL++    G  PD   Y  L++ LC A + +DALQL S +K    
Sbjct: 648 CKSGRIEEA----CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 703

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P+ VTYN L+DGL+K+G  ++A+ +   ++ +   PD+++YN  +  LC    + +A  
Sbjct: 704 DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763

Query: 595 FLNDA---LCRGILPTTITWHILVRAVMNNG 622
              D    + R  +P  +T+ +L+  +   G
Sbjct: 764 LHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794



 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 173/578 (29%), Positives = 288/578 (49%), Gaps = 66/578 (11%)

Query: 91   KALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            +AL V+ RM E+        F       C+   FE+A      +  K L+PDV ++G +I
Sbjct: 550  RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 609

Query: 143  NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            +GL K+G +  A  + D M   GV  NVV YN L+ G  K G    A +  E +V    V
Sbjct: 610  DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 669

Query: 203  YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
             P+ +TY  ++  LC+  R D+ L++   +K    + D+ TY   + GL K+G  E A  
Sbjct: 670  -PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAIT 728

Query: 263  VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK---GCL-NVVSYNILIR 318
            V  EMV  G   D VTYN +ID  C+AG ++E   L   M  +    C+ NVV+Y++LI 
Sbjct: 729  VLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLIN 788

Query: 319  GLLENGKVDEAISIWELLREKNCN--ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
            GL + G++DEA  + + +  K+C+   +  T+   ++GLCK   + +A +++  + +G  
Sbjct: 789  GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSL 848

Query: 377  GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                D  +                 ++L++G  +  + + A  +F +M   G  P VV+Y
Sbjct: 849  RVSPDTVTF----------------STLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892

Query: 437  NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            N L+NGLCK ++   A++ ++ M++KG  PD+ITYS+L++  C++  +D AL+L      
Sbjct: 893  NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952

Query: 497  KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVPNLVTYNTLMDGLFKTG--- 552
            +G TP+V  +N +I GLC + +  +A Q++ +M  K    P+ +TY TL+DGLF+TG   
Sbjct: 953  RGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAG 1012

Query: 553  ----------------------------DCDKALEIWNHILEERLRPDIISYNITLKGLC 584
                                        D  +AL   + +LE  L PD +++NI + G C
Sbjct: 1013 QAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRAL---HRMLELELVPDKVTFNILIAGAC 1069

Query: 585  SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                   A     + + + + P  +T+  L+  +   G
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/591 (30%), Positives = 302/591 (51%), Gaps = 80/591 (13%)

Query: 66   IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK-R 114
            + K   P+ +  SV + A+ K S  D+AL++   M    GC   +         LC+  R
Sbjct: 422  VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS-RGCTPNVVTFNSIIDGLCKSDR 480

Query: 115  QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
              E  + F +   + GL PD  +Y T+I+GL ++G    A A+ D M     + +   +N
Sbjct: 481  SGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFN 536

Query: 175  ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
              I+G  K GD  RA +++ R+ +E  + P+ VT+N++I G CK G F++   +++ M  
Sbjct: 537  CCINGLSKLGDVSRALQVYNRM-LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595

Query: 235  NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
               + D  T+ + I GLCKAG VE A  +   M   G+  + VTYNA++ G C++G+I+E
Sbjct: 596  KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655

Query: 295  CFELWEVMGRKGCL------------------------------------NVVSYNILIR 318
              +  E M   GC+                                    + V+YNIL+ 
Sbjct: 656  ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715

Query: 319  GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-- 376
            GL ++G+ ++AI++ E +  K  + D  T+  LI+ LCK G L +A ++  ++       
Sbjct: 716  GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775

Query: 377  ------------------GRLADAASLVNRMDKHGCKL--NAYTCNSLMNGFIQASKLEN 416
                              GR+ +A  L+  M +  C +  N  T NS ++G  + S +  
Sbjct: 776  CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835

Query: 417  AIFLFKEMSRKGC---SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            A  L + + R G    SP  V+++TLI+GLCK  +  EA +   +M+  G+ P+++TY++
Sbjct: 836  ACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNV 894

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            L+NGLC++ K++ A  +    + KG TPDV  Y++L+   C A  V++AL+L   M  R 
Sbjct: 895  LMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRG 954

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHI-LEERLRPDIISYNITLKGL 583
            C PN+VT+N+++DGL K+    +A ++++ + L+  L PD I+Y   + GL
Sbjct: 955  CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 239/459 (52%), Gaps = 33/459 (7%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LCR  + + A + ++ L   G  PD  +Y  +++GL KSG    A+ V +EM  +G   +
Sbjct: 682  LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLE 227
            VV YN LID   K GD   A+ +   +    S    PNVVTY+V+INGLCK GR DE  E
Sbjct: 742  VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARE 801

Query: 228  MWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYNAMI 283
            +   M +   +   +  TY SF+ GLCK   +  A  + R + +  + V  D VT++ +I
Sbjct: 802  LIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 284  DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
            DG C+ G+  E   +++ M   G + NVV+YN+L+ GL +  K++ A ++ E + +K   
Sbjct: 862  DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921

Query: 343  ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
             D  T+ VL++  CK  ++++A+++L                  + M   GC  N  T N
Sbjct: 922  PDVITYSVLVDAFCKASHVDEALELL------------------HGMASRGCTPNVVTFN 963

Query: 403  SLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            S+++G  ++ +   A  +F +M+ K G +P  ++Y TLI+GL +    G+A   +  M +
Sbjct: 964  SIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD 1023

Query: 462  KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
                PD   ++  INGL +   +  AL    + L+    PD   +NILI G C AG  E 
Sbjct: 1024 ----PDTYAFNCCINGLSKLGDVSRALH---RMLELELVPDKVTFNILIAGACKAGNFEQ 1076

Query: 522  ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            A  L+  M  +N  P+++T+  L+DGL K G  +   +I
Sbjct: 1077 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 122/228 (53%), Gaps = 11/228 (4%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  + E+A   + S+ +KG+ PDV +Y  +++   K+  +  AL +   M  RG   N
Sbjct: 899  LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            VV +N +IDG  K      A ++++ + ++  + P+ +TY  +I+GL + G   +   + 
Sbjct: 959  VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            D M     + D++ +   I+GL K G+V    R    M+E  +  D VT+N +I G C+A
Sbjct: 1019 DAMP----DPDTYAFNCCINGLSKLGDV---SRALHRMLELELVPDKVTFNILIAGACKA 1071

Query: 290  GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
            G  ++   L+E M  K    +V+++  LI GL + G+V+   + W+++
Sbjct: 1072 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE---ATWDIM 1116


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 168/544 (30%), Positives = 293/544 (53%), Gaps = 31/544 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +I    K+   DKA+ +F++M +         +G     L ++R+ ++A         KG
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEM-FERGVETNVVCYNILIDGFFKKGDYMRA 189
             P V +Y T+I+GL K G +  AL ++D+M    G    VV Y+ LIDG  +  +  + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++ E +       PN VTYN ++N L   GR  E   + ++M  N    +  T+   I 
Sbjct: 121 CKLLEEMAGR-GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 250 GLCKAGNVEGAERVYREM--VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           GLCK G +E A RV  EM  +ESG+  D +T+N+++DG C+  +I +   +++    +GC
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             NVV+Y+ LI GL +  K+DEA+ +   + E  C A++ T+  +++GL K G +  A+ 
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L ++ + G                   RL +A  L+  M + G   +  T  +L +G  
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML-EKGWKPDM 468
           ++ + + A+ +   M+ +GC+P  ++Y+++++GLCK  R  EA  + ++M  ++   P +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I YS LI+GLC++ KID A +   + ++ G  PDV  ++ILI+GLC AG+++  L+L+  
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +R CVP++VTY TL+D L +    D+A +++  +  + L PD  +    + GL   +R
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539

Query: 589 MSDA 592
             DA
Sbjct: 540 DEDA 543



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 261/469 (55%), Gaps = 23/469 (4%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +IDG  K     +A  +++++V + ++YP+VVTY  +I+GL K  R  E  ++++  +  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMV-DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREM-VESGIFVDAVTYNAMIDGFCRAGKIKE 294
                  TY + I GLCK G +E A  +Y +M +  G     VTY+ +IDG CR  ++ +
Sbjct: 60  GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L E M  +GC  N V+YN L+  LL  G+  EA S+ E +    C  +  T G++I 
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 354 GLCKNGYLNKAIQILNE---VEEG----------------GEGRLADAASLVNRMDKHGC 394
           GLCK G +  A ++++E   +E G                 E R+ DA ++  R  + GC
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + N  T ++L++G  + +K++ A+ L  +M   GC    V+Y+T+++GL KV R  +A  
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            +++M + G  PD +TY+ LI+G  + +++  A+ L  + L+ GF P V  Y  L HGLC
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL-EERLRPDI 573
            +G+ ++A+++   M  R C PN +TY++++DGL K G   +AL  +  +  +E + P +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I+Y+  + GLC   ++ +A+EFL   +  G +P  +T+ IL+  + + G
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 221/400 (55%), Gaps = 21/400 (5%)

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCK+  V+ A  ++++MV+  I+ D VTY A+IDG  +  ++KE ++L+E    KG
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           C   VV+YN +I GL + G+++ A+++++ +           T+  LI+GLC++  ++K 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            ++L E+   G                 +GR  +A SL+ +M  +GC     T   ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 408 FIQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
             +  ++E A  +  EM     G SP V+++N++++GLCK +R  +A++  K  LE+G +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+++TYS LI+GL +  K+D AL+L  + ++ G   +   Y+ ++ GL   G++EDA+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              M+   C+P+ VTYNTL+DG FK     +A+ +   +LE    P +++Y     GLC 
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             R  +A E L+    RG  P  IT+  +V  +   G  T
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 400



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 61/255 (23%)

Query: 73  EDVALSVIQAYGKNSMPDKA-----LDVF---QRMNEIFGC-----EAGI---------- 109
           ED  + + Q      +PD       +D F   QR+ E  G      EAG           
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354

Query: 110 ---LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERG 165
              LCR  +F++A   L+ +  +G  P+  +Y ++++GL K+G +  AL  F++M  +  
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLV---------------------------- 197
           V  +V+ Y+ LIDG  K G    A E  ER++                            
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474

Query: 198 ------METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
                  E    P++VTY  +++ LC+  R DE  +++ +M+ +    D  T  + IHGL
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534

Query: 252 CKAGNVEGAERVYRE 266
            +    E A+R+  E
Sbjct: 535 LEVNRDEDAKRIQDE 549


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 178/592 (30%), Positives = 304/592 (51%), Gaps = 44/592 (7%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P LV+ + + +E  +I+          KC+C        +  +GK +      
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DV      + G     LC + +  +A    + ++E   +P+V ++ T++NGL + G ++ 
Sbjct: 148 DVVTFNTLLHG-----LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++   + Y  ++DG  K GD + A ++  ++   + + PNVV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAII 262

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           + LCK GR  +   ++  M++     D FTY S I G C +G    AE++ +EM+E  I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTYNA+I+ F + GK  E  EL++ M  +G + N ++Y+ +I G  +  ++D A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L+  K C+ +  T   LI+G C    ++  +++L+E+ E G                 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   +  TC++L++G     KL++A+ +FK M +         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI+GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+P+V  +  LI+G C AG+V+D L+L+  M +R  V N +TY TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + G  K G+ + AL+I+  ++   + PD I+    L GL S   +  A   L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 286/561 (50%), Gaps = 46/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      + + GL PDV ++ T
Sbjct: 95  PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F +MFE     NVV +  L++G  ++G  + A  + +R+ ME 
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MED 213

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYCSFIHGLCKAGNVEG 259
            + P  +TY  +++G+CK G     L++  +M++ +    +   Y + I  LCK G    
Sbjct: 214 GLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           A+ ++ EM E GIF D  TYN+MI GFC +G+  +  +L  E++ RK   +VV+YN LI 
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK------------------QNR 375

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  N  T N+L++G+  A ++++ + L  EM+  G      +YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G   V     A   ++EM+  G  PD++T   L++GLC + K+  AL++  + +QK 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKS 494

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A ++++ +  +   P+++++   + G C   R+ D  E   +   RGI+ 
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 607 TTITWHILV---RAVMN-NGA 623
             IT+  L+   R V N NGA
Sbjct: 615 NAITYITLICGFRKVGNINGA 635



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 30/449 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV +  ++  + +  R D  + ++ +M++ +   D +++   I   C    +  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + ++ + G+  D VT+N ++ G C   ++ E   L+  M    C  NVV++  L+ GL  
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA+++ + + E        T+G +++G+CK G    A+ +L ++EE         
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      +GR +DA +L   M + G   + +T NS++ GF  + +  +A  L +EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITYS +I+G C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A  +      KG +P++  +N LI G C A +++D ++L   M +   V +  TYNTL
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN------- 597
           + G +  GD + AL++   ++   L PDI++ +  L GLC   ++ DA E          
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 598 --DA--LCRGILPTTITWHILVRAVMNNG 622
             DA     G+ P   T++IL+  ++N G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEG 525



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 249/536 (46%), Gaps = 55/536 (10%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVS---------RILELIEI-----QKCYCPEDVA 76
           E   + + +LFH +      P +V   +         RI+E + +     +    P  + 
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 77  L-SVIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAKRFLNSL 126
             +++    K      ALD+ ++M EI         +      LC+  +   A+     +
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            EKG+ PD+++Y ++I G   SG    A  +  EM ER +  +VV YN LI+ F K+G +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+E+++ + +   + PN +TY+ MI+G CK  R D    M+  M       +  T+ +
Sbjct: 342 FEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I G C A  ++    +  EM E+G+  D  TYN +I GF   G +    +L + M   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 307 -CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST-----------THGVLING 354
            C ++V+ + L+ GL +NGK+ +A+ +++++++   + D++           T+ +LI+G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L                    EG+  +A  L   M   G   +  T +S+++G  + S+L
Sbjct: 521 LIN------------------EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +F  M  K  SP VV++ TLING CK  R  +      EM  +G   + ITY  L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           I G  +   I+ AL +  + +  G  PD      ++ GL S  +++ A+ +   ++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+VV +  L+  + ++ER     S  ++M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +N L+HGLC   +V +AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M +  C PN+VT+ TLM+GL + G   +A+ + + ++E+ L+P  I+Y   + G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 584 CSCSRMSDAFEFLND-ALCRGILPTTITWHILVRAVMNNG 622
           C       A + L        I+P  + +  ++ ++  +G
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDG 269



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 12/185 (6%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
            E +  T   L      E  +  +  L+  +  R I P  + + S I  L +  +     
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL---- 562

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D A  +  + G  S     +     +N    C+AG      + +        +  +G+  
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGY--CKAG------RVDDGLELFCEMGRRGIVA 614

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           +  +Y T+I G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 194 ERLVM 198
           E+L M
Sbjct: 675 EKLQM 679


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 186/645 (28%), Positives = 318/645 (49%), Gaps = 33/645 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           IS  +L  LL+   +  T++ LF  A  + GY+H+    + ++ +L        + ++L+
Sbjct: 64  ISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLK 123

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRK 113
            ++ +     E + + +++ YGK  +P +A  +   M  ++ C+           IL   
Sbjct: 124 QMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDG 183

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
                A      +  +G+ P VY++G V+  L    ++  A ++  +M + G   N V Y
Sbjct: 184 DCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIY 243

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    +      A ++ E + +     P+V T+N +I+GLC+ GR  E  ++ DRM 
Sbjct: 244 QTLIHALCENNRVSEALQLLEDMFL-MCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D+ TY   +HGLC+ G V+ A  +  ++       + V YN +I G+  +G+ +
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP----NTVLYNTLISGYVASGRFE 358

Query: 294 ECFEL-WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           E  +L +  M   G   +  ++NI+I GL++ G +  A+ +   +  K    +  T+ +L
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ING CK G L +A +I+N +   G                 +G + +A  L   M   GC
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K + YT NSL+NG  +  K+E A+ L+ +M  +G     V+YNTL++     +   +A+ 
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V EML +G   D ITY+ LI  LC++  ++  L L  + L KG  P +   NILI GLC
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GKV DAL+   +M  R   P++VTYN+L++GL K G   +A  ++N +  E +RPD I
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAI 658

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +YN  +   C     +DA   L   +  G +P  +TW IL+  ++
Sbjct: 659 TYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIV 703



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 264/534 (49%), Gaps = 38/534 (7%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNS-MPDKALDV 95
           +P++F+ +L R + P +      +  L  + +     D A S+++   K+  +P+    +
Sbjct: 189 APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEV----DSACSLLRDMAKHGCVPNSV--I 242

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           +Q +          LC   +  +A + L  ++    +PDV ++  VI+GL ++G +  A 
Sbjct: 243 YQTL-------IHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            + D M  RG  T+ + Y  L+ G  + G    A+ +  ++       PN V YN +I+G
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP-----NPNTVLYNTLISG 350

Query: 216 LCKCGRFDECLEM-WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
               GRF+E  ++ ++ M     E D++T+   I GL K G +  A  +  EMV      
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
           + +TY  +I+GFC+ G+++E  E+   M  KG  LN V YN LI  L ++G ++EA+ ++
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------E 376
             +  K C  D  T   LINGLCKN  + +A+ + +++   G                  
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
             +  A  LV+ M   GC L+  T N L+    +   +E  + LF+EM  KG  PT++S 
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LI+GLC+  +  +A  F+++M+ +G  PD++TY+ LINGLC+   +  A  L  +   
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           +G  PD   YN LI   C  G   DA  L         +PN VT++ L++ + K
Sbjct: 651 EGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 238/487 (48%), Gaps = 28/487 (5%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+ L   GD      +  +M + G+      + +++  + K G   +A  +   +    
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 201 SVYPNVVTYNVMINGLCK--CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           S  P   +YNV+++ L    C R    +  +D + +       +T+   +  LC    V+
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNV-FYDMLSRG-VSPTVYTFGVVMKALCMVSEVD 222

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A  + R+M + G   ++V Y  +I   C   ++ E  +L E M    C  +V ++N +I
Sbjct: 223 SACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVI 282

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL   G++ EA  + + +  +  + D+ T+G L++GLC+ G +++A  +LN++      
Sbjct: 283 HGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP--- 339

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVSY 436
                              N    N+L++G++ + + E A   L+  M   G  P   ++
Sbjct: 340 -------------------NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTF 380

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +I+GL K      A   + EM+ K ++P++ITY++LING C+  +++ A ++      
Sbjct: 381 NIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSA 440

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           KG + +   YN LI  LC  G +E+ALQL+  M  + C P++ T+N+L++GL K    ++
Sbjct: 441 KGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEE 500

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           AL +++ +  E +  + ++YN  +        +  AF+ +++ L RG     IT++ L++
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIK 560

Query: 617 AVMNNGA 623
           A+   GA
Sbjct: 561 ALCKTGA 567



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 190/359 (52%), Gaps = 20/359 (5%)

Query: 115 QFEKAKRFL-NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           +FE+AK  L N++   G +PD Y++  +I+GLVK G L+ AL + +EM  +  E NV+ Y
Sbjct: 356 RFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            ILI+GF K+G    A EI   +  +  +  N V YN +I  LCK G  +E L+++  M 
Sbjct: 416 TILINGFCKQGRLEEAAEIVNSMSAK-GLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
               + D +T+ S I+GLCK   +E A  +Y +M   G+  + VTYN ++  F     I+
Sbjct: 475 GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           + F+L + M  +GC L+ ++YN LI+ L + G V++ + ++E +  K       +  +LI
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILI 594

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           +GLC+ G +N A++ L ++   G                  G + +A++L N++   G +
Sbjct: 595 SGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIR 654

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
            +A T N+L++         +A  L  +    G  P  V+++ LIN + K   +G  +S
Sbjct: 655 PDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARFS 713


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/644 (27%), Positives = 320/644 (49%), Gaps = 29/644 (4%)

Query: 7   RLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI 66
           RLL  L+ + +P  AL + +SA     +A S  ++  I+++L        +  ++  +  
Sbjct: 58  RLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFE 117
           +       V  S +++Y +    D A+D+ +     FG +A          +L    + +
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
             +   N + ++G++PDV +  T+I  L ++  +  A+ + +EM    V  +   +  L+
Sbjct: 178 LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            GF ++G    A  +  ++ MET   P  VT NV+ING CK GR ++ L    +   +  
Sbjct: 238 QGFIEEGSIEAALRVKTKM-METGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E D  TY +F+H LC+ G+V  A +V   M++ G   D  TYN +I+   + G++ E   
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           +   M  +GCL +  ++N LI  L    +++EA+ +   L  K  + D  T  +LIN LC
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           K G  +  I++  E++  G                  G+L +A  L+  M+ +GC  +  
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N++++   +  ++E A  +F +M   G S + V++NTLI+GLCK +R  +A   +++M
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +++G +P  ITY+ ++   C+   +  A  +       GF  DV  Y  LI+GLC AG+ 
Sbjct: 537 VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 596

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + AL+L   M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y I 
Sbjct: 597 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIV 656

Query: 580 LKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +GLC     + +AF+FL + + +G +P   ++ +L   ++N G
Sbjct: 657 FRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 127/259 (49%), Gaps = 13/259 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           ALD+ + M E  GC             LC++ + E+A+   + +   G+     ++ T+I
Sbjct: 459 ALDLLKEM-ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL K+  +  A  + ++M + G++ + + YN ++  + K+GD  +A +I E +      
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTA-NGF 576

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
             +VVTY  +INGLCK GR    L++   M+          Y   I  L +  N+  A  
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAG-KIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           ++REM E G   DA+TY  +  G CR G  IKE F+    M  KG +    S+ +L  GL
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696

Query: 321 LENGKVDEAISIWELLREK 339
           L  G  D  IS  EL+ EK
Sbjct: 697 LNLGMDDYLISAIELIIEK 715



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 32/162 (19%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P    Y  +I  L  +   D+   L  +  ++G      +    +       + +DA+
Sbjct: 85  FAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAV 144

Query: 524 QLYSN-MKKRNCVPNLVTYNTLMDGLFKTGDCDKALE-IWNHILEERLRPDIISYNITLK 581
            L  N +       +   YN L++ L + G   K LE ++N + +  ++PD+++ N  +K
Sbjct: 145 DLVRNQLNTFGVQADTAVYNHLLNVLAE-GSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            LC   ++  A   L +     + P   T+  L++  +  G+
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 186/665 (27%), Positives = 317/665 (47%), Gaps = 61/665 (9%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   +  T++ LF+ A  + GY HS H+++ ++ +L +      + ++L+
Sbjct: 59  ITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLK 118

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRK 113
            ++ + C   E + + +++ YGK  +P +A  +   M  ++  E           IL   
Sbjct: 119 QMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAG 178

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              + A      +  +G+ P VY++G V+       ++  A ++  +M + G   N + Y
Sbjct: 179 NCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY 238

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            +LI    +      A ++ E + +     P+V T+N +I+GLCK GR  E  ++ DRM 
Sbjct: 239 QMLIHALSENNRVNEAMKLLEEMFL-MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297

Query: 234 KNEREKDSFTYCSFIHGLCKAGNV--------------------------------EGAE 261
             +   D+      +HGLC+ G V                                E  +
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKD 357

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            +Y+ MV +G   DA T+N MIDG C+ G +    E  + M +KG   NV++Y ILI G 
Sbjct: 358 LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G  +EA  +   +  K  + ++  +  LI  LCK+G +  A+Q+  E          
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE---------- 467

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   GCK + YT NSL+ G  +  K+E A+ L+++M  +G     V+YNTLI
Sbjct: 468 --------MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +   ++E   +A   V EM  +G   D ITY+ LI  LC++   +  L L  Q   +   
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P +   NILI+  C  GKV DALQ   +M +R   P++VTYN+L++GL K G   +AL +
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +N +  + + PD ++YN  +   C     +DA + L   +  G +P  ITW IL+   + 
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699

Query: 621 NGAST 625
           N + +
Sbjct: 700 NNSDS 704


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/643 (27%), Positives = 314/643 (48%), Gaps = 52/643 (8%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE-- 73
            NP        +ATR      +P+     LRRLI  + +   +R++EL   +    P+  
Sbjct: 17  PNPKPHHLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAARLVELSASRDGEAPDVY 76

Query: 74  ----------------DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE 117
                           D A  +  A G  S     +DVF     + G      CR    +
Sbjct: 77  LCTKLIRNLCRRGRTSDAARVLRAAEGSGS----PVDVFAYNTLVAG-----YCRYGHLD 127

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            A+R + S+    + PD Y+Y  +I  L   G +  AL++ D+M  RG + NVV Y +L+
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           +   K   + +A  + + +  +    PN+VTYNV+ING+C+ GR D+  ++ +R+     
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D+ +Y + + GLC +   +  E ++ EM+E     + VT++ +I  FCR G ++   +
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           + + M    C  N    NI+I  + + G+VD+A      +    CN D+ ++  ++ GLC
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           +    N A ++L E+                     +G +  A  L+ +M +HGC +   
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L+NGF     +++A+ LF+ M    C P  ++Y TL+ GLC  ER   A   V EM
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           L +   P+++T+++L+N  CQ   +D A++L  Q ++ G TP++  YN L  G+      
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           EDAL+L   +  +   P+++T+++++  L K    ++A+++++   +  +RP  + YN  
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKI 600

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L GLC    + +A +FL   +  G +P   T+ IL+  +   G
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREG 643



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 238/501 (47%), Gaps = 26/501 (5%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S    G  PDVY    +I  L + G    A  V       G   +V  YN L+ G+ + G
Sbjct: 65  SASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYG 124

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A+    RL+    V P+  TY  +I  LC  GR  + L + D M +   + +  TY
Sbjct: 125 HLDAAR----RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY 180

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              +  +CK    E A  V  EM   G   + VTYN +I+G CR G++ +  +L   +  
Sbjct: 181 TVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            GC  + VSY  L++GL  + + D+   ++  + EKNC  +  T  +LI   C+ G + +
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           AIQ+L +                  M +H C  N   CN ++N   +  ++++A      
Sbjct: 301 AIQVLQQ------------------MTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   GC+P  +SY T++ GLC+ ER+ +A   +KEM+     P+ +T++  I  LCQ   
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           I+ A+ L  Q  + G T  V  YN L++G C  G ++ AL+L+ +M    C PN +TY T
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTT 459

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+ GL      D A E+   +L     P+++++N+ +   C    + +A E +   +  G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 604 ILPTTITWHILVRAVMNNGAS 624
             P  IT++ L   +  + +S
Sbjct: 520 CTPNLITYNTLFDGITKDCSS 540



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 90  DKALDVFQRM----NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           D AL++F+ M    N I +      LC   + + A   +  +  +   P+V ++  ++N 
Sbjct: 439 DSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNF 498

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
             + G L  A+ + ++M E G   N++ YN L DG  K      A E+   LV +  V P
Sbjct: 499 FCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVSP 557

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V+T++ +I  L K  R +E ++M+   +       +  Y   + GLCK   ++ A    
Sbjct: 558 DVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFL 617

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
             MV +G   +  TY  +I+G  R G +KE  +L  ++  +G   VVS N++
Sbjct: 618 AYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG---VVSKNLI 666


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 293/552 (53%), Gaps = 21/552 (3%)

Query: 93  LDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
           +D+F   + ++     I  LCR    + A      +++ G++PDV ++ T+ING+   G 
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           +  A+ +++EM   G E +V+ YN LI+G    G+   A  +++++  +    PNVVTYN
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM-EQNGCKPNVVTYN 237

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+ LCK    ++ ++    M       D+ TY S +HGLC  G +  A R+++ M ++
Sbjct: 238 TIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN 297

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G   D VTYN +ID   +   + +  +    M  +G   +VV+Y  ++ GL   G+++EA
Sbjct: 298 GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEA 357

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I +++ + +K C  D   +  +I+ LCK+  +N A++ L+E+ + G              
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHG 417

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G+L +A  L   M       N  T + L++G  Q   +  A ++F+ M+ KG  P 
Sbjct: 418 FCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           + +YN L+NG C   +  EA    + M+ KG  PD+ +Y++LING C S+++D A  L  
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLT 537

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           Q   K  TP+   YN ++ GLC  G++ DA +L+  M     +P L+TY+ L++GL K G
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHG 597

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+AL+++  + E++L PDII Y I ++G+    ++  A    +     GI P   T++
Sbjct: 598 HLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYN 657

Query: 613 ILVRAVMNNGAS 624
           ++++ ++  G S
Sbjct: 658 VMIKGLLKEGLS 669



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 271/505 (53%), Gaps = 19/505 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C + + + A    N +   G +PDV SY T+INGL  SG+   A+ VF +M + G + N
Sbjct: 173 VCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPN 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +ID   K      A +    +V    + P+ +TYN +++GLC  G+ +E   ++
Sbjct: 233 VVTYNTIIDSLCKDRLVNDAMDFLSEMVGR-GIPPDAITYNSIVHGLCCLGQLNEATRLF 291

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RM++N  + D  TY   I  L K   V  A     EMV+ GI  D VTY  ++ G C  
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL 351

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E   L++ M +KGC  +VV+YN +I  L ++  V++A+     + ++    ++ T+
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 349 GVLINGLCKNGYLNKAIQILNE---------------VEEG--GEGRLADAASLVNRMDK 391
             +++G C  G L++A Q+  E               + +G   EG +++A  +   M +
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + N YT N+LMNG+    K+  A  +F+ M  KGC+P + SYN LING C   R  +
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A + + +M  K   P+ +TY+ ++ GLC   ++  A +L  +    G  P +  Y+IL++
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC  G +++AL+L+ +MK++   P+++ Y  L++G+F  G  + A  +++ +  + ++P
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651

Query: 572 DIISYNITLKGLCSCSRMSDAFEFL 596
              +YN+ +KGL       +A+E  
Sbjct: 652 PGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/480 (32%), Positives = 258/480 (53%), Gaps = 30/480 (6%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A+ VF++M E  GC+  +         LC+ R    A  FL+ +  +G+ PD  +Y +++
Sbjct: 217 AVHVFKKM-EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIV 275

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL   G L  A  +F  M + G + +VV YNI+ID  +K      A +    +V +  +
Sbjct: 276 HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV-DQGI 334

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+VVTY  +++GLC  G+ +E + ++ +M++   + D   Y + I  LCK   V  A  
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME 394

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLL 321
              EMV+ GI  +AVTY+ ++ GFC  G++ E  +L+ E++GR    N ++++IL+ GL 
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G V EA  ++E + EK    +  T+  L+NG C    +N+A ++  E+  G       
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVG------- 506

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC  + ++ N L+NG+  + +++ A  L  +MS K  +P  V+YNT++ 
Sbjct: 507 ----------KGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMK 556

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC V R  +A    K+M   G  P ++TYS+L+NGLC+   +D ALKL     +K   P
Sbjct: 557 GLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP 616

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D+ +Y ILI G+   GK+E A  L+S +      P   TYN ++ GL K G  D+A E++
Sbjct: 617 DIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 260/488 (53%), Gaps = 20/488 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P +  +G  +  + K       + + ++M   GV   V   NILI+   +      A  
Sbjct: 90  RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +W ++  +  + P+V+T+  +ING+C  G+    +E+++ M ++  E D  +Y + I+GL
Sbjct: 150 VWGKM-FKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGL 208

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNV 310
           C +GN   A  V+++M ++G   + VTYN +ID  C+   + +  + L E++GR    + 
Sbjct: 209 CNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDA 268

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           ++YN ++ GL   G+++EA  +++ + +  C  D  T+ ++I+ L K+  +N        
Sbjct: 269 ITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN-------- 320

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                     DAA  ++ M   G   +  T  ++++G     +L  AI LFK+M +KGC 
Sbjct: 321 ----------DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P VV+YNT+I+ LCK     +A  F+ EM+++G  P+ +TYS +++G C   ++D A +L
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + + +   P+   ++IL+ GLC  G V +A  ++  M ++   PN+ TYN LM+G   
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               ++A +++  ++ +   PD+ SYNI + G C+  RM  A   L     + + P T+T
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550

Query: 611 WHILVRAV 618
           ++ +++ +
Sbjct: 551 YNTIMKGL 558



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 247/469 (52%), Gaps = 20/469 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           ALA F  M       ++V +   +    K   Y     +  ++ +   V   V + N++I
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDL-FGVTHTVYSLNILI 135

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N LC+    D  + +W +M K   + D  T+ + I+G+C  G ++ A  +Y EMV SG  
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            D ++YN +I+G C +G       +++ M + GC  NVV+YN +I  L ++  V++A+  
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
              +  +    D+ T+  +++GLC  G LN+A +                  L  RM+++
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATR------------------LFKRMEQN 297

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK +  T N +++   +   + +A     EM  +G  P VV+Y T+++GLC + +  EA
Sbjct: 298 GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEA 357

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               K+M +KG KPD++ Y+ +I+ LC+ + ++ A++   + + +G  P+   Y+ ++HG
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHG 417

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C+ G++++A QL+  M  RN +PN +T++ L+DGL + G   +A  ++  + E+ + P+
Sbjct: 418 FCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           I +YN  + G C   +M++A +     + +G  P   +++IL+    N+
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNS 526



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 203/401 (50%), Gaps = 19/401 (4%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+ L  + RM +         +  F+  + K         +  +M   G+     + N +
Sbjct: 75  DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+  CR   +     +W  M + G   +V+++  LI G+   GK+  A+ ++  +     
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  ++  LINGLC +G  N A+ +                    +M+++GCK N  T 
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFK------------------KMEQNGCKPNVVTY 236

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++++   +   + +A+    EM  +G  P  ++YN++++GLC + +  EA    K M +
Sbjct: 237 NTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G KPD++TY+++I+ L + + ++ A     + + +G  PDV  Y  ++HGLC  G++ +
Sbjct: 297 NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNE 356

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A++L+  M+++ C P++V YNT++D L K    + A+E  + +++  + P+ ++Y+  L 
Sbjct: 357 AIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILH 416

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           G C+  ++ +A +   + + R ++P T+T+ ILV  +   G
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 120/205 (58%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M+R    P++V +   +  + K++++        +M   G    + + ++
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN LC+   +D A+ +  +  + G  PDV  +  LI+G+C+ GK++ A++LY+ M +  
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P++++YNTL++GL  +G+ + A+ ++  + +   +P++++YN  +  LC    ++DA 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 594 EFLNDALCRGILPTTITWHILVRAV 618
           +FL++ + RGI P  IT++ +V  +
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGL 278



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A +   S+ EK L+PD+  Y  +I G+   G L  A  +F ++   G++  
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPP 652

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVM 198
              YN++I G  K+G    A E++ +  M
Sbjct: 653 GRTYNVMIKGLLKEGLSDEAYELFRKWKM 681



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 35/174 (20%)

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A +    M     +P ++ +   +  + + K+    + LC Q    G T  V   NILI
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           + LC    V                                   D A+ +W  + +  ++
Sbjct: 136 NCLCRLNHV-----------------------------------DFAVSVWGKMFKLGIQ 160

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           PD+I++   + G+C+  ++  A E  N+ +  G  P  I+++ L+  + N+G +
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNT 214


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 157/501 (31%), Positives = 276/501 (55%), Gaps = 31/501 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ +  +A   ++ + E+G +PD  +YGT++NG+ K GD + AL +  +M E  ++ N
Sbjct: 20  LCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKAN 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ ++D   K G++++A+ I+  +  E  ++PNV+TYN MI+G C  G++ +  ++ 
Sbjct: 80  VVIYSAIVDRLCKDGNHIKAQNIFTEM-HEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +   + D  T+ + I+   K G V GAE +YREM+   IF   +TY++MIDGFC+ 
Sbjct: 139 RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILI-----------RGLLENGKVDEAISIWELLR 337
            ++++   ++++M  KGC  ++++ N LI            G  + G V+ A  +++ + 
Sbjct: 199 SRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMI 258

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
               + D  T   L+ GLC+NG L KA+++    ++             ++MD     L+
Sbjct: 259 SNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK-------------SKMD-----LD 300

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             TCN ++NG  + +K++ A  LF  +   G    VV+YN LI    K   F  A     
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EML KG  P  +TY+ +++G C+  +++ A ++    + +G +PDV  ++ LI G C AG
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +V+D L+L+S M +R  V + +TYN L+ G  K GD + A +I+  ++   + PD I++ 
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480

Query: 578 ITLKGLCSCSRMSDAFEFLND 598
             L GLC+ + +      L D
Sbjct: 481 SMLAGLCTKAELQKGLTMLED 501



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 252/496 (50%), Gaps = 13/496 (2%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + E G   +V ++ T++NGL + G +L ALA+ D M E G + + V Y  +++G  K GD
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            + A  +  ++  E+ +  NVV Y+ +++ LCK G   +   ++  M +     +  TY 
Sbjct: 61  TVSALNMLRKMD-ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I G C  G    AE++ R+M+E  I  D VT++A+I+ F + GK+    EL+  M R+
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC--KNGYLN 362
                 ++Y+ +I G  ++ ++++A  +++L+  K C+ D  T   LI+G C  K   ++
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
              Q+         G +  A  L   M  +G   +  TCN+L+ G  +  KLE A+ +FK
Sbjct: 240 GFCQV---------GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK 290

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
              +        + N +ING+CK  +  EA+     +   G + D++TY++LI    +  
Sbjct: 291 VFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEG 350

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
               A  +  + L KG  P    YN ++ G C   ++E+A Q+  +M    C P++VT++
Sbjct: 351 NFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFS 410

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+ G  K G  D  LE+++ + +  L  D I+YN  + G C    ++ A +   + +  
Sbjct: 411 TLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS 470

Query: 603 GILPTTITWHILVRAV 618
           G+ P TIT+  ++  +
Sbjct: 471 GVCPDTITFRSMLAGL 486



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 26/258 (10%)

Query: 37  SPHLFHHILRRLIDPKLVV------------HVSRILELIEI-QKCYCPEDVALS--VIQ 81
           +  LF  ++   + P +V              + + LE+ ++ QK     D A    +I 
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKRFLNSLWEKGLK 132
              K +  D+A D+F  +  + G E          G+  ++  F +A+     +  KG+ 
Sbjct: 310 GMCKGNKVDEAWDLFNSL-PVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P   +Y ++++G  K   L  A  + D M   G   +VV ++ LI G+ K G      E+
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  +  +  +  + +TYN +I+G CK G  +   ++++ M  +    D+ T+ S + GLC
Sbjct: 429 FSEMC-QRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC 487

Query: 253 KAGNVEGAERVYREMVES 270
               ++    +  ++ +S
Sbjct: 488 TKAELQKGLTMLEDLQKS 505


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 172/547 (31%), Positives = 269/547 (49%), Gaps = 53/547 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E+A   L  + + G  PDV +Y ++I+GL K      A  +F EM  RG+  +
Sbjct: 31  LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 90

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------------------------------- 197
            VCY  LI    + G   +A  +++ +                                 
Sbjct: 91  TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150

Query: 198 -MET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            ME   + PN V Y+ +I+GLCK  + D  LEM  +MKK     D+ TY   I GLCK+G
Sbjct: 151 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSG 210

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGC-LNVVSY 313
           +VE A   + EM+E+G   D  TYN +I GFC+AG        L +     GC +++ +Y
Sbjct: 211 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTY 270

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             ++  L +N K++EA+++ E +    C     T+  L+NGLCK G L +AI +L ++ +
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 E R  +A  L   M   G  L+     +L+   +Q  K+  
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  ++K M+  GC P VV+ +T+I+GL K  R G A    K M  +G  P+ + YS LI+
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GLC+++K+D AL++  Q  +   TPD   YNILI GLC +G VE A   +  M +  C P
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++ TYN L+ G  K G+ D A  +++ +   R   ++++Y   + GLC   +++ A  + 
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYF 570

Query: 597 NDALCRG 603
                RG
Sbjct: 571 QHMKERG 577



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 262/509 (51%), Gaps = 19/509 (3%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+A   +  +   G  P + +Y  ++NGL K G L  A+ +  ++ + G   +VV Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LIDG  K+     A ++++ + +   +  + V Y  +I  L + G+  +   ++  M  
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALR-GLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           +    D  T  + I GL KAG +  A R+++ M   G+  + V Y+A+I G C+A K+  
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             E+   M +  C  + ++YN+LI GL ++G V+ A + ++ + E  C  D  T+ +LI+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G CK G  + A                 + SL      +GC ++ +T  ++++   +  K
Sbjct: 240 GFCKAGNTDAA-----------------SHSLAQETTINGCTIDIHTYTAIVDWLAKNKK 282

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E A+ L ++++  GC+PT+ +YN L+NGLCK+ R  EA   ++++++ G  PD++TY+ 
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+GL + K+   A KL  +   +G   D   Y  LI  L   GK+  A  +Y  M    
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           CVP++VT +T++DGL K G    A+ I+  +    L P+ + Y+  + GLC   +M  A 
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           E L         P TIT++IL+  +  +G
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSG 491


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 266/500 (53%), Gaps = 32/500 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VET 168
           LCR+ +  +A   L+ + E GL+P+  +YGT+++G+ K GD + AL +  +M E   ++ 
Sbjct: 187 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKP 246

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV Y+ +IDG +K G    A+ ++  +  E  + PN+ TYN MING C  GR+ E   +
Sbjct: 247 NVVIYSAIIDGLWKDGRQTDAQNLFSEM-QEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M + +   D  T+   I+ L K G    AE +Y EM+  GI  + +TYN+MIDGF +
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++     ++ +M  KGC  +V++++ILI G     +VD+ + +   +  +   A++ T
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G C+ G LN A+ +L E                  M   G   N  TCN+L++G
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQE------------------MISSGVCPNVVTCNTLLDG 467

Query: 408 FIQASKLENAIFLFKEMSRK-----------GCSPTVVSYNTLINGLCKVERFGEAYSFV 456
                KL++A+ +FK M +               P V +YN LI GL    +F EA    
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELY 527

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +EM  +G  PD ITY+ +I+GLC+  ++D A ++      KGF+PDV  +  LI+G C  
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKV 587

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G+V D L+++  M +R  V N +TY TL+ G  + G+ + AL+I+  ++   + PD I+ 
Sbjct: 588 GRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITI 647

Query: 577 NITLKGLCSCSRMSDAFEFL 596
              L GL S   +  A + L
Sbjct: 648 RNMLTGLWSKEELKRAVQCL 667



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 267/526 (50%), Gaps = 40/526 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C K  F  A      + + G  P + ++ T+++GL     +  AL  F ++     + NV
Sbjct: 124 CSKLPF--ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNV 177

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + +  L++G  ++G  + A  + +R+V E  + PN +TY  +++G+CK G     L +  
Sbjct: 178 IAFTTLMNGLCREGRVVEAVALLDRMV-EDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236

Query: 231 RMKKNEREKDSFT-YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +M++  R K +   Y + I GL K G    A+ ++ EM E GI  +  TYN MI+GFC +
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  E   L  E+  RK   +VV++++LI  L++ GK  EA  ++  +  +    ++ T+
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITY 356

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+G  K                  + RL  A  +   M   GC  +  T + L++G+
Sbjct: 357 NSMIDGFSK------------------QNRLDAAERMFYLMATKGCSPDVITFSILIDGY 398

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A ++++ + L  EMSR+G     ++Y TLI+G C++     A   ++EM+  G  P++
Sbjct: 399 CGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNV 458

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKG------------FTPDVTMYNILIHGLCSA 516
           +T + L++GLC + K+  AL++  + +QK               PDV  YNILI GL + 
Sbjct: 459 VTCNTLLDGLCNNGKLKDALEMF-KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           GK  +A +LY  M  R  VP+ +TYN+++DGL K    D+A ++++ +  +   PD++++
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + G C   R+ D  E   +   RGI+   IT+  L+      G
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVG 623



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 222/448 (49%), Gaps = 32/448 (7%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P V+ +  ++  + +  R D  + +  +M+      + +++   I   C    +  A   
Sbjct: 74  PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           + ++ + G     VT++ ++ G C   ++ E    +  + +    NV+++  L+ GL   
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKP---NVIAFTTLMNGLCRE 190

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           G+V EA+++ + + E     +  T+G +++G+CK G    A+ +L ++EE          
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVI 250

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +GR  DA +L + M + G   N +T N ++NGF  + +   A  L +EM 
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +  SP VV+++ LIN L K  +F EA     EML +G  P+ ITY+ +I+G  +  ++D
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A ++      KG +PDV  ++ILI G C A +V+D ++L   M +R  V N +TY TL+
Sbjct: 371 AAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN-------- 597
            G  + G+ + AL++   ++   + P++++ N  L GLC+  ++ DA E           
Sbjct: 431 HGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMD 490

Query: 598 -DA--LCRGILPTTITWHILVRAVMNNG 622
            DA      + P   T++IL+  ++N G
Sbjct: 491 LDASHPFNDVEPDVQTYNILICGLINEG 518



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   L++AI LF  M R    P V+ +  L+  + ++ER     S  ++M  + 
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              ++ ++++LI   C   K+  AL    +  + GF P +  ++ L+HGLC   +V +AL
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             +  +    C PN++ + TLM+GL + G   +A+ + + ++E+ L+P+ I+Y   + G+
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 584 CSCSRMSDAFEFLN-----DALCRGILPTTITWHILVRAVMNNGAST 625
           C   +M D    LN     + + R I P  + +  ++  +  +G  T
Sbjct: 223 C---KMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQT 265


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 326/646 (50%), Gaps = 30/646 (4%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           ++LL  L+ + +P  AL + ++A     +A  P ++  I+R+L     +  +  ++  + 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 66  IQKCYCPEDVALSVIQAYGKNSMPDKALD-VFQRMNEIFGCEA---------GILCRKRQ 115
            +       V  S + +Y    + D A+D +  ++  +FG +A          +L    +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +  +   + +  +G+KPDV ++ T++  L ++  +  A+ + +EM  RGV  +   +  
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ GF ++G    A  +  R+ +E       VT NV+ING CK GR ++ L    +   +
Sbjct: 222 LMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  TY +F++GLC+  +V  A +V   MV+ G   D  TYN +++  C+ G+++E 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M  +GCL ++ ++N LI  L    +++EA+ +   +  K  + D  T  +LIN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LCK G  + A+++  E++  G                  G+L  A  L+  M+  GC  +
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N++++G  +  ++E A  +F +M  +G S   +++NTLI+GLCK ++  +A+  + 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+ +G +P+ ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + + AL++   M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y 
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640

Query: 578 ITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  +GLC     + +AF+F+ + + +G +P   ++ +L   ++N G
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++  Y K     KA D+ + M           +G     LC+  + + A + L  +  K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P   +Y  V+  L +  ++  AL++F EM E G   + + Y I+  G  + G  ++ 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE 655

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
              +   +++    P   ++ ++  GL   G  D
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 689



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 39/239 (16%)

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           R  +HG  L A     L+    +    + A+  L   ++R   +P    Y  +I  L  V
Sbjct: 29  RASRHG-PLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV 87

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK--GFTPDVT 504
                    V EM  +G +  +      ++     +  D A+ L    LQ   G   D  
Sbjct: 88  GALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTV 147

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +YN L++ L    K++    +YS M  R                                
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARG------------------------------- 176

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               ++PD++++N  +K LC   ++  A   L +   RG+ P   T+  L++  +  G+
Sbjct: 177 ----IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 326/646 (50%), Gaps = 30/646 (4%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           ++LL  L+ + +P  AL + ++A     +A  P ++  I+R+L     +  +  ++  + 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 66  IQKCYCPEDVALSVIQAYGKNSMPDKALD-VFQRMNEIFGCEA---------GILCRKRQ 115
            +       V  S + +Y    + D A+D +  ++  +FG +A          +L    +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +  +   + +  +G+KPDV ++ T++  L ++  +  A+ + +EM  RGV  +   +  
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ GF ++G    A  +  R+ +E       VT NV+ING CK GR ++ L    +   +
Sbjct: 222 LMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  TY +F++GLC+  +V  A +V   MV+ G   D  TYN +++  C+ G+++E 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M  +GCL ++ ++N LI  L    +++EA+ +   +  K  + D  T  +LIN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LCK G  + A+++  E++  G                  G+L  A  L+  M+  GC  +
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N++++G  +  ++E A  +F +M  +G S   +++NTLI+GLCK ++  +A+  + 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+ +G +P+ ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + + AL++   M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y 
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640

Query: 578 ITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  +GLC     + +AF+F+ + + +G +P   ++ +L   ++N G
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++  Y K     KA D+ + M           +G     LC+  + + A + L  +  K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P   +Y  V+  L +  ++  AL++F EM E G   + + Y I+  G  + G  ++ 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE 655

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
              +   +++    P   ++ ++  GL   G  D
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 689



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 39/239 (16%)

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           R  +HG  L A     L+    +    + A+  L   ++R   +P    Y  +I  L  V
Sbjct: 29  RASRHG-PLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV 87

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK--GFTPDVT 504
                    V EM  +G +  +      ++     +  D A+ L    LQ   G   D  
Sbjct: 88  GALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTV 147

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +YN L++ L    K++    +YS M  R                                
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARG------------------------------- 176

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               ++PD++++N  +K LC   ++  A   L +   RG+ P   T+  L++  +  G+
Sbjct: 177 ----IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 326/646 (50%), Gaps = 30/646 (4%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           ++LL  L+ + +P  AL + ++A     +A  P ++  I+R+L     +  +  ++  + 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 66  IQKCYCPEDVALSVIQAYGKNSMPDKALD-VFQRMNEIFGCEA---------GILCRKRQ 115
            +       V  S + +Y    + D A+D +  ++  +FG +A          +L    +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +  +   + +  +G+KPDV ++ T++  L ++  +  A+ + +EM  RGV  +   +  
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTT 221

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ GF ++G    A  +  R+ +E       VT NV+ING CK GR ++ L    +   +
Sbjct: 222 LMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  TY +F++GLC+  +V  A +V   MV+ G   D  TYN +++  C+ G+++E 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M  +GCL ++ ++N LI  L    +++EA+ +   +  K  + D  T  +LIN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LCK G  + A+++  E++  G                  G+L  A  L+  M+  GC  +
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N++++G  +  ++E A  +F +M  +G S   +++NTLI+GLCK ++  +A+  + 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+ +G +P+ ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC AG
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + + AL++   M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y 
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640

Query: 578 ITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  +GLC     + +AF+F+ + + +G +P   ++ +L   ++N G
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++  Y K     KA D+ + M           +G     LC+  + + A + L  +  K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P   +Y  V+  L +  ++  AL++F EM E G   + + Y I+  G  + G  ++ 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE 655

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
              +   +++    P   ++ ++  GL   G  D
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 689



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 39/239 (16%)

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           R  +HG  L A     L+    +    + A+  L   ++R   +P    Y  +I  L  V
Sbjct: 29  RASRHG-PLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV 87

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK--GFTPDVT 504
                    V EM  +G +  +      ++     +  D A+ L    LQ   G   D  
Sbjct: 88  GALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTV 147

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +YN L++ L    K++    +YS M  R                                
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARG------------------------------- 176

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               ++PD++++N  +K LC   ++  A   L +   RG+ P   T+  L++  +  G+
Sbjct: 177 ----IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 280/519 (53%), Gaps = 23/519 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + EKG +PDV +Y T+I+GL K+G +  AL + +EM E+GV  +V  Y I++D   + G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A E++ +++ E     N V YN +INGLCK    +   ++ + M     E D+ TY 
Sbjct: 61  VDEADELFHKMI-ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-- 303
           + + GLC+ G V  A++ +  M   G   D V YN ++D   + GK+ E + L++ M   
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 304 -RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            RK   ++++YN LI G     K DEA+ +++ +  K    D+ T+  ++ GL +   ++
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +A ++  ++ + G                  G +A    L   M +     +   CN+++
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +   +A K+++A  + +EMS+ G  P VV+YN L++GLCK     +A+     M++ G  
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD+++YS+++NGLC++ K+  A  L  + +++   PDV  +NIL+ GLC AGK+++A  L
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              M + N +P+ VT  TLM GL +    D+A+ ++ +++E+    D++ +NI L GLC 
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479

Query: 586 CSRMSDAFEFLNDALCRG--ILPTTITWHILVRAVMNNG 622
             +++ A  F    +       P  +T+  LV A++  G
Sbjct: 480 EGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/543 (30%), Positives = 287/543 (52%), Gaps = 35/543 (6%)

Query: 57  VSRILELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---- 109
           V+  LE++E   +K   P+    ++I     +    D+A ++F +M E  GC A      
Sbjct: 26  VTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIE-RGCSANTVAYN 84

Query: 110 -----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+    E+A + L  +  KG +PD  +Y T+++GL + G +  A   FD M  R
Sbjct: 85  ALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 144

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM-ETSVYPNVVTYNVMINGLCKCGRFD 223
           G   +VV YN L+D  +K+G    A  +++ + M +  V P+++TYN +I+G C+  + D
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E ++++  +       D+ TY S + GL +  N++ AE ++++MV+SG   +  TY+ ++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 284 DGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
            G CR G +  C EL+E M  K    +V+  N +I  L +  KVD+A  + E + +    
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T+ +L++GLCK   ++KA +                  L + M  +GC  +  + +
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHE------------------LFSTMVDNGCAPDIVSYS 366

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            ++NG  + +K+ +A  LF  M  +   P VV++N L++GLCK  +  EA   +  M E 
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD +T + L++GLC+ K+ D A++L    ++KG   DV  +NI++ GLC  GK+  A
Sbjct: 427 NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQA 486

Query: 523 LQLYSNMKKRNC--VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           L  + +M K +    P++VTY TL++ L + G  D+A++ +  +      PD ++YN  +
Sbjct: 487 LLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLM 546

Query: 581 KGL 583
            GL
Sbjct: 547 NGL 549



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 210/450 (46%), Gaps = 93/450 (20%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD--EMFERGVE 167
           LCR  +  +AK+F +S+  +G  PDV +Y  +++ L K G +  A  +F   +M +R V 
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 168 TNVVCYNILIDGF-----------------------------------FKKGDYMRAKEI 192
            +++ YN LIDGF                                    +K +   A+E+
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           ++++V ++   PN  TY+++++G C+ G    CLE+++ M +     D     + I  LC
Sbjct: 245 FKKMV-DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLC 303

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL---- 308
           KA  V+ A +V  EM + G   D VTYN ++DG C+   + +  EL+  M   GC     
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363

Query: 309 --------------------------------NVVSYNILIRGLLENGKVDEAISIWELL 336
                                           +VV++NIL+ GL + GK+DEA  + +++
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRL 379
            E N   D  T   L++GLC++   ++A+++   + E G                 EG+L
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483

Query: 380 ADAASLVNRMDKHGCKL--NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           A A      M K   +   +  T  +L+N  I+A +++ A+  F++M+  GC+P  V+YN
Sbjct: 484 AQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           TL+NGL K  R  +A    + M EKG+  D
Sbjct: 544 TLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 54  VVHVSRILELIE--IQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI 109
           V +++R LEL E   +K + P DV L  +VI    K    D A  V + M++I      +
Sbjct: 270 VGNMARCLELYEEMTEKRFSP-DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVV 328

Query: 110 --------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
                   LC+    +KA    +++ + G  PD+ SY  V+NGL K+  +  A  +FD M
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            ER +  +VV +NIL+DG  K G    AK++ + ++ E +V P+ VT   +++GLC+  R
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD-VMSEHNVLPDGVTCTTLMHGLCRDKR 447

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES-GIFV-DAVTY 279
            DE + ++  M +     D   +   + GLC+ G +  A   ++ MV+S G F  D VTY
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY 507

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
             +++    AG++ +  + ++ M   GC  + V+YN L+ GL + G+  +A  + + ++E
Sbjct: 508 TTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567

Query: 339 KNCNAD 344
           K   +D
Sbjct: 568 KGFLSD 573



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 55  VHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---- 109
           VH +R+L    I++   P+ V  +++     K    D+A D+   M+E      G+    
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT 437

Query: 110 ----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
               LCR ++ ++A R    + EKG   DV  +  V+ GL + G L  AL  F  M +  
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497

Query: 166 VE--TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            E   +VV Y  L++   + G   +A + ++++   +   P+ V YN ++NGL K GR  
Sbjct: 498 GEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT-GSGCAPDYVAYNTLMNGLRKQGRHI 556

Query: 224 ECLEMWDRMKKNEREKDSFTYC 245
           +     DR+ +  +EK   + C
Sbjct: 557 QA----DRLTQAMKEKGFLSDC 574


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 294/565 (52%), Gaps = 33/565 (5%)

Query: 76  ALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           A  V++A   +  P   +DVF     + G      CR    + A+R + S+    + PD 
Sbjct: 95  AARVLRAAEGSGSP---VDVFAYNTLVAG-----YCRYGHLDAARRLIGSM---PVAPDA 143

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           Y+Y  +I  L   G +  AL++ D+M  RG + NVV Y +L++   +   + +A  + + 
Sbjct: 144 YTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDE 203

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +    PN+VTYNV+ING+C+ GR D+  E+ +R+     + D+ +Y + + GLC + 
Sbjct: 204 MRAK-GCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK 262

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
             +  E ++ EM+E     + VT++ +I  FCR G ++   ++ E M   GC  N    N
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           I+I  + + G+VD+A  +   +    CN D+ ++  ++ GLC+    + A ++LNE+   
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN 382

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                             +G +  A  L+ +M +HGC +   T N+L+NGF     +++A
Sbjct: 383 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA 442

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF+ M    C P  ++Y TL+ GLC  ER   A   V EML     P+++T+++L++ 
Sbjct: 443 LELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSF 499

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            CQ   ++ A++L  Q ++ G TP++  YN L+ G+      EDAL+L   +  +   P+
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++T+++++  L K    ++A+++++ + +  +RP  + YN  L GLC    + +A +F  
Sbjct: 560 VITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFA 619

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
             +  G +P   T+ IL+  + + G
Sbjct: 620 YMVSNGCMPNESTYIILIEGLAHEG 644



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 239/496 (48%), Gaps = 26/496 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PDVY    +I  L + G    A  V       G   +V  YN L+ G+ + G    A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +    RL+    V P+  TY  +I  LC  GR  + L + D M +   + +  TY   + 
Sbjct: 131 R----RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            +C+    E A  V  EM   G   + VTYN +I+G CR G++ +  EL   +   G   
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           + VSY  L++GL  + + D+   ++  + EKNC  +  T  +LI   C+ G + +AIQ+L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M +HGC  N   CN ++N   +  ++++A  L  +M   G
Sbjct: 307 EQ------------------MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C+P  +SY T++ GLC+ ER+ +A   + EM+     P+ +T++  I  LCQ   I+ A+
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  Q  + G T  V  YN L++G C  G ++ AL+L+ +M    C PN +TY TL+ GL
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGL 465

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
                 D A E+   +L     P+++++N+ +   C    + +A E +   +  G  P  
Sbjct: 466 CNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNL 525

Query: 609 ITWHILVRAVMNNGAS 624
           IT++ L+  +  + +S
Sbjct: 526 ITYNTLLDGITKDCSS 541



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F       C+K   E+A   +  + E G  P++ +Y T+++G+ K      AL +   + 
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +GV  +V+ ++ +I G   K D +        +V +  + P  V YN ++ GLCK    
Sbjct: 553 SKGVSPDVITFSSII-GILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEI 611

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           D  ++ +  M  N    +  TY   I GL   G ++ A+ +   +   G+ 
Sbjct: 612 DNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 309/621 (49%), Gaps = 43/621 (6%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-------ELIEIQKC------YCPEDVAL 77
           E   A SP+  +  LRRLI    +   +R++       E  ++  C       C      
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
              +          A+DVF     + G      CR  Q + A+R + S+    + PD Y+
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAG-----YCRYGQLDAARRLIASM---PVAPDAYT 147

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I GL   G +  AL++ D+M  RG + +VV Y +L++   K   + +A E+ + + 
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +    PN+VTYNV+ING+C+ GR D+  E  +R+     + D+ +Y + + GLC A   
Sbjct: 208 AK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E  E ++ EM+E     + VT++ ++  FCR G ++   ++ E M   GC  N    NI+
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I  + + G+VD+A      +    C+ D+ ++  ++ GLC+      A ++L E+     
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           +G +  A  L+ +M +HGC++N  T N+L+NGF    ++++A+ 
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF  M    C P  ++Y TL+ GLC  ER   A   + EML+K   P+++T+++L++  C
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q   +D A++L  Q ++ G TP++  YN L+ G+ +    E+AL+L   +      P++V
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIV 563

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY++++  L +    ++A+++++ + +  +RP  + YN  L  LC       A +F    
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623

Query: 600 LCRGILPTTITWHILVRAVMN 620
           +  G +P  +T+  L+  + N
Sbjct: 624 VSNGCMPNELTYITLIEGLAN 644



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 244/513 (47%), Gaps = 26/513 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L  +    +A R ++    +G  PDVY    +I  L + G    A  V       G   +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN L+ G+ + G    A+    RL+    V P+  TY  +I GLC  GR  E L + 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAAR----RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     +    TY   +  +CK+     A  V  EM   G   + VTYN +I+G CR 
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  E    +   G   + VSY  +++GL    + ++   ++  + EKNC  +  T 
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L+   C+ G + +AIQ+L +                  M  HGC  N   CN ++N  
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQ------------------MSGHGCAANTTLCNIVINTI 330

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  ++++A      M   GCSP  +SY T++ GLC+ ER+ +A   +KEM+ K   P+ 
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++  I  LCQ   I+ A  L  Q  + G   ++  YN L++G C  G+V+ AL+L+ +
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M    C PN +TY TL+ GL      D A E+   +L++   P+++++N+ +   C    
Sbjct: 451 MP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           M +A E +   +  G  P  IT++ L+  + N+
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITND 540



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 1/200 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + +K   P+V ++  +++   + G +  A+ + ++M E G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN L+DG     +   A E+   LV    V P++VTY+ +I  L +  R +E ++M+
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLV-SNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             ++       +  Y   +  LCK  N +GA   +  MV +G   + +TY  +I+G    
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645

Query: 290 GKIKECFELWEVMGRKGCLN 309
             +KE  +L   +  +G LN
Sbjct: 646 DFLKETRDLLRELCSRGVLN 665


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 308/621 (49%), Gaps = 43/621 (6%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-------ELIEIQKC------YCPEDVAL 77
           E   A SP+  +  LRRLI    +   +R++       E  ++  C       C      
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
              +          A+DVF     + G      CR  Q + A+R + S+    + PD Y+
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAG-----YCRYGQLDAARRLIASM---PVAPDAYT 147

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I GL   G +  AL++ D+M  RG + +VV Y +L++   K   + +A E+ + + 
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +    PN+VTYNV+ING+C+ GR D+  E  +R+     + D+ +Y + + GLC A   
Sbjct: 208 AK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E  E ++ EM+E     + VT++ ++  FCR G ++   ++ E M   GC  N    NI+
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I  + + G+VD+A      +    C+ D+ ++  ++ GLC+      A ++L E+     
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           +G +  A  L+ +M +HGC++N  T N+L+NGF    ++++A+ 
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF  M    C P  ++Y TL+ GLC  ER   A   + EML+K   P+++T+++L++  C
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q   +D A++L  Q ++ G TP++  YN L+ G+      E+AL+L   +      P++V
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIV 563

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY++++  L +    ++A+++++ + +  +RP  + YN  L  LC       A +F    
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623

Query: 600 LCRGILPTTITWHILVRAVMN 620
           +  G +P  +T+  L+  + N
Sbjct: 624 VSNGCMPNELTYITLIEGLAN 644



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + +K   P+V ++  +++   + G +  A+ + ++M E G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN L+DG  K  +   A E+   LV    V P++VTY+ +I  L +  R +E ++M+
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLV-SNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             ++       +  Y   +  LCK  N +GA   +  MV +G   + +TY  +I+G    
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645

Query: 290 GKIKECFELWEVMGRKGCLN 309
             +KE  +L   +  +G LN
Sbjct: 646 DFLKETRDLLRELCSRGVLN 665


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 286/547 (52%), Gaps = 30/547 (5%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           A+DVF     + G      CR  Q + A+R + S+    + PD Y+Y  +I GL   G +
Sbjct: 141 AVDVFAYNTLVAG-----YCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRV 192

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             AL++ D+M  RG + +VV Y +L++   K   + +A E+ + +  +    PN+VTYNV
Sbjct: 193 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNV 251

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +ING+C+ GR D+  E  +R+     + D+ +Y + + GLC A   E  E ++ EM+E  
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              + VT++ ++  FCR G ++   ++ E M   GC  N    NI+I  + + G+VD+A 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
                +    C+ D+ ++  ++ GLC+      A ++L E+                   
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 431

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G +  A  L+ +M +HGC++N  T N+L+NGF    ++++A+ LF  M    C P  
Sbjct: 432 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNT 488

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++Y TL+ GLC  ER   A   + EML+K   P+++T+++L++  CQ   +D A++L  Q
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            ++ G TP++  YN L+ G+      E+AL+L   +      P++VTY++++  L +   
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A+++++ + +  +RP  + YN  L  LC       A +F    +  G +P  +T+  
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 668

Query: 614 LVRAVMN 620
           L+  + N
Sbjct: 669 LIEGLAN 675



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 212/430 (49%), Gaps = 24/430 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V     +I  LC+ GR  +   +    +++    D F Y + + G C+ G ++ A R+
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              M    +  DA TY  +I G C  G++ E   L + M  +GC  +VV+Y +L+  + +
Sbjct: 167 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
           +    +A+ + + +R K C  +  T+ V+ING+C+ G ++ A + LN +   G       
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                       R  D   L   M +  C  N  T + L+  F +   +E AI + ++MS
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             GC+      N +IN +CK  R  +A+ F+  M   G  PD I+Y+ ++ GLC++++ +
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L  + ++K   P+   +N  I  LC  G +E A  L   M +  C  N+VTYN L+
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +G    G  D ALE++  +     +P+ I+Y   L GLC+  R+  A E L + L +   
Sbjct: 464 NGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 520

Query: 606 PTTITWHILV 615
           P  +T+++LV
Sbjct: 521 PNVVTFNVLV 530



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 187/428 (43%), Gaps = 58/428 (13%)

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + DR        D +     I  LC+ G    A RV R    SG  VD   YN ++ G+C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           R G++     L   M      +  +Y  +IRGL + G+V EA+S+ + +  + C     T
Sbjct: 156 RYGQLDAARRLIASMPVAP--DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVT 213

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + VL+  +CK+    +A+++L+E                  M   GC  N  T N ++NG
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDE------------------MRAKGCTPNIVTYNVIING 255

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  ++++A      +S  G  P  VSY T++ GLC  +R+ +      EM+EK   P+
Sbjct: 256 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 315

Query: 468 MITYSLL-----------------------------------INGLCQSKKIDMALKLCC 492
            +T+ +L                                   IN +C+  ++D A +   
Sbjct: 316 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 375

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
                G +PD   Y  ++ GLC A + EDA +L   M ++NC PN VT+NT +  L + G
Sbjct: 376 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 435

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             ++A  +   + E     +I++YN  + G C   R+  A E      C+   P TIT+ 
Sbjct: 436 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYT 492

Query: 613 ILVRAVMN 620
            L+  + N
Sbjct: 493 TLLTGLCN 500



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 22/357 (6%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
           A R+       G   D      +I   CR G+  +   +     R G  ++V +YN L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G    G++D A     L+       D+ T+  +I GLC                    GR
Sbjct: 153 GYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCD------------------RGR 191

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A SL++ M   GC+ +  T   L+    +++    A+ +  EM  KGC+P +V+YN 
Sbjct: 192 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 251

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +ING+C+  R  +A  F+  +   G++PD ++Y+ ++ GLC +K+ +   +L  + ++K 
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+   +++L+   C  G VE A+Q+   M    C  N    N +++ + K G  D A 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  N++      PD ISY   LKGLC   R  DA E L + + +   P  +T++  +
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 428



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 3/208 (1%)

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A+    A  L    + +G +P V     LI  LC+  R  +A   ++     G   D+  
Sbjct: 87  ATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 146

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L+ G C+  ++D A +L          PD   Y  +I GLC  G+V +AL L  +M 
Sbjct: 147 YNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R C P++VTY  L++ + K+    +A+E+ + +  +   P+I++YN+ + G+C   R+ 
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAV 618
           DA EFLN     G  P T+++  +++ +
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGL 291



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + +K   P+V ++  +++   + G +  A+ + ++M E G   N
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN L+DG  K  +   A E+   LV    V P++VTY+ +I  L +  R +E ++M+
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLV-SNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 616

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             ++       +  Y   +  LCK  N +GA   +  MV +G   + +TY  +I+G    
Sbjct: 617 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 676

Query: 290 GKIKECFELWEVMGRKGCLN 309
             +KE  +L   +  +G LN
Sbjct: 677 DFLKETRDLLRELCSRGVLN 696


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/535 (31%), Positives = 286/535 (53%), Gaps = 28/535 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +        FG   G + +K+Q+  A    N +   G+  +VYS   +
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +   +  A++V  +MF+ G++ + + +N LI+G   +G    A  ++  +V  + 
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW-SG 196

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNV++YN +INGLCK G     + ++ +M++N  + +  TY + I  LCK   V  A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
               EMV+ GI  D VTYN ++ GFC  G++ E   L+ E++GR    + V++NIL+ GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V EA  + E + EK    ++ T+  L++G C +  +++AI++L            
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG----------- 365

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   GC  N  + N L+NG+ ++ ++  A  L  EMS K  +P  V+Y+TL+
Sbjct: 366 -------IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            GLC+V R  EA +  KEM   G  PD++ YS+L++G C+   +D ALKL  +  ++   
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++ +Y ILI G+  AGK+E A +L+S +      P++ TYN ++ GL K G  D+A E 
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEF 538

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + ++   PD  SYN+ ++G       S A + +++ + +     + T+ +L+
Sbjct: 539 FRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 241/492 (48%), Gaps = 57/492 (11%)

Query: 93  LDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
           +D+F   + ++     I  LCR    + A   +  +++ G++PD  ++ T+INGL   G 
Sbjct: 122 MDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGK 181

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           +  A+ +F+EM   G E NV+ YN +I+G  K G+ + A  ++ ++  +    PNVVTYN
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKME-QNRGKPNVVTYN 240

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+ LCK    +E +E    M       D  TY + +HG C  G +  A R+++EMV  
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
            +  D VT+N ++DG C+ G + E   + E M  KG   N  +YN L+ G   + ++DEA
Sbjct: 301 NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEA 360

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           I +  ++  K C  + +++ +LING CK+  +N+A ++L+E+ E                
Sbjct: 361 IKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE---------------- 404

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
                  +  T ++LM G  Q  +   A+ LFKEM   G  P +++Y+ L++G CK    
Sbjct: 405 --KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHL 462

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL------------------- 490
            EA   +KEM E+  KP++I Y++LI G+  + K+++A +L                   
Sbjct: 463 DEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVM 522

Query: 491 ------------CCQFLQK----GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
                         +F +K    GF PD   YN++I G         A+QL   M  +  
Sbjct: 523 IKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF 582

Query: 535 VPNLVTYNTLMD 546
             +  T+  L+D
Sbjct: 583 SADSSTFQMLLD 594



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 132/242 (54%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA +   RM +   + +       +    +  +  +A+ L  +M   G +  V S N LI
Sbjct: 79  DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N LC++     A S + +M + G +PD IT++ LINGLC   KI  A+ L  + +  G  
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V  YN +I+GLC  G    A++++  M++    PN+VTYNT++D L K    ++A+E 
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + +++  + PD+++YN  L G CS  ++++A     + + R ++P T+T++ILV  +  
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318

Query: 621 NG 622
            G
Sbjct: 319 EG 320



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 119/204 (58%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M R    P+VV +   +  + K +++  A S   +M   G   ++ + ++
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN LC+   +D A+ +  +  + G  PD   +N LI+GLC+ GK+++A+ L++ M    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+++YNT+++GL K G+   A+ ++  + + R +P++++YN  +  LC    +++A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           EFL++ + RGI P  +T++ ++  
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHG 280


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/491 (32%), Positives = 267/491 (54%), Gaps = 32/491 (6%)

Query: 104 GCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           GCE  +         LC+  + ++A+     +      P + +Y T+++GL ++G L  A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           +A+F EM +R    +V+ +NIL+ G  + G    A E + +  M+    PNV+TY+V+I+
Sbjct: 65  MALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRK--MDDRCSPNVITYSVLID 121

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           GLCK  R  + +E+ + MK      D  TY   + GLCK   V  A  V REM+++G   
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           + VTYN+++ G CRA ++ +   L   M  +GC  NVV+Y  LI GL + G+V +A ++ 
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             + +K    D   + +LINGLCK   ++++I +L     G                  G
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG------------------G 283

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            K +  T +S++ G  ++++L+ A  L   +  +GC P V+ Y+TLI+GLCK  +  EA+
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              + M   G   D++TYS LI+GLC++ ++D A  L  + ++ G  P    YN LI GL
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK-ALEIWNHILEERLRPD 572
           C    +++A++L   M++ NC P+ VTYN L+ G+ +    D  AL+ +  +++  + PD
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 573 IISYNITLKGL 583
            I+Y+I L+GL
Sbjct: 464 HITYSILLEGL 474



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 250/415 (60%), Gaps = 19/415 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNVVTYN +I+GLCK    D   E+++ MK  E      TY + + GL + G +E A  +
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           ++EM++     D +++N ++ G CRAGKI+   E +  M  +   NV++Y++LI GL + 
Sbjct: 68  FQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKA 126

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            +V +A+ + E ++ + C+ D  T+ +L++GLCK   +  A ++L E+ + G        
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG-------- 178

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                     C  N  T NSL++G  +A ++ +A+ L ++M+ +GC+P VV+Y TLI+GL
Sbjct: 179 ----------CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CKV R  +A + + +M++KG  PD++ Y++LINGLC++ ++D ++ L  + +  G  PDV
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y+ +I+GLC + ++++A +L   +K R C P+++ Y+TL+DGL K G  D+A +++  
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +  +    D+++Y+  + GLC   R+ +A   L   +  G  P+T+T++ L++ +
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 155/462 (33%), Positives = 259/462 (56%), Gaps = 28/462 (6%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M + G E NVV YN LIDG  K  +  RA+E++E +       P++VTYN +++GL + G
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           + +  + ++  M  + R  D  ++   + GLC+AG +E A   +R+M +     + +TY+
Sbjct: 60  KLERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYS 117

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE- 338
            +IDG C+A ++ +  EL E M  +GC  +V++Y IL+ GL +  KV  A   WE+LRE 
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA---WEVLREM 174

Query: 339 --KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
               C  +  T+  L++GLC+                    R++DA +L+  M   GC  
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCR------------------ARRVSDALALMRDMTCRGCTP 216

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           N  T  +L++G  +  ++++A  +  +M  KG +P ++ YN LINGLCK ++  E+ + +
Sbjct: 217 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 276

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +  +  G KPD++TYS +I GLC+S ++D A +L      +G  PDV +Y+ LI GLC A
Sbjct: 277 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           GKV++A  LY  M    C  ++VTY+TL+DGL K G  D+A  +   ++     P  ++Y
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           N  +KGLC  + + +A E + +       P+ +T++IL+  +
Sbjct: 397 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 438



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/427 (33%), Positives = 221/427 (51%), Gaps = 43/427 (10%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           + AL+ F++M++   C   +         LC+  +  +A   L S+  +G  PDV +Y  
Sbjct: 96  ETALEFFRKMDD--RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 153

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL K   +  A  V  EM + G   N+V YN L+ G        RA+ + + L +  
Sbjct: 154 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC------RARRVSDALALMR 207

Query: 201 SV-----YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            +      PNVVTY  +I+GLCK GR  +   M   M       D   Y   I+GLCKA 
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            V+ +  + R  V  GI  D VTY+++I G CR+ ++ E   L   +  +GC  +V+ Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI GL + GKVDEA  ++E++    C+AD  T+  LI+GLCK                 
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCK----------------- 370

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR+ +A  L+ RM + G   +  T NSL+ G    + L+ AI L +EM R  C+P+ V
Sbjct: 371 -AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429

Query: 435 SYNTLINGLCKVERF-GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC- 492
           +YN LI+G+C++ER    A  + +EM++ G  PD ITYS+L+ GL +SK +     L   
Sbjct: 430 TYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489

Query: 493 QFLQKGF 499
           Q +Q G+
Sbjct: 490 QMVQLGY 496



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 198/357 (55%), Gaps = 21/357 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M + G   + VTYN++IDG C+  +     EL+E M    C  ++V+YN L+ GL   GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           ++ A+++++ + ++  + D  +  +L+ GLC+ G +  A++   ++++            
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR----------- 108

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
                   C  N  T + L++G  +A+++  A+ L + M  +GCSP V++Y  L++GLCK
Sbjct: 109 --------CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 160

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +   A+  ++EML+ G  P+++TY+ L++GLC+++++  AL L      +G TP+V  
Sbjct: 161 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 220

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  LI GLC  G+V+DA  + ++M  +   P+L+ YN L++GL K    D+++ +    +
Sbjct: 221 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 280

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++PD+++Y+  + GLC  +R+ +A   L     RG  P  I +  L+  +   G
Sbjct: 281 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 337



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 165/322 (51%), Gaps = 15/322 (4%)

Query: 56  HVSRILELIEIQKCY-CPEDVALSVIQAYG--KNSMPDKALDVFQRMNEIFGCEAGI--- 109
            VS+ +EL+E  K   C  DV    I   G  K S    A +V + M +  GC   +   
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA-GCVPNLVTY 186

Query: 110 ------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                 LCR R+   A   +  +  +G  P+V +YGT+I+GL K G +  A A+  +M +
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 246

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           +G   +++ YN+LI+G  K      +  +  R V    + P+VVTY+ +I GLC+  R D
Sbjct: 247 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIYGLCRSNRLD 305

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E   +   +K      D   Y + I GLCKAG V+ A  +Y  M   G   D VTY+ +I
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG C+AG++ E   L   M R G   + ++YN LI+GL +   +DEAI + E +   NC 
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 425

Query: 343 ADSTTHGVLINGLCKNGYLNKA 364
             + T+ +LI+G+C+   ++ A
Sbjct: 426 PSAVTYNILIHGMCRMERVDSA 447


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 296/562 (52%), Gaps = 33/562 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P+ +A  ++I  + + +  D AL+  + MNE      +F     I  LC+  + +KA   
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + ++G+ PD  ++ ++++GL K+G    A ++   M ER    +   YN LI G  K
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           + +  RAK++ +  V  +   P+VVTY+++ +GLCK GR DE  E+   M       +  
Sbjct: 344 QQNVDRAKDLVDEFV-SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I GLCKA   E A  +   +V SG   D VTY  ++DG C+ G++ +  ++ E M
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            ++GC  +V++Y  L+ GL   G+VDEA  I++ +  K+C AD+  +  L+NG CK+   
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            +A ++++ +                   +    ++ Y  N+LM+G+ +  +L+    +F
Sbjct: 523 KEAQKVVDGI-------------------RGTPYIDVY--NALMDGYCKEGRLDEIPNVF 561

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           ++M+ +GC P + +YN +++GLCK  +  EA+ F++ M   G  PD+++Y+++I+GL ++
Sbjct: 562 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K   A ++  Q +Q G  PD   YN L+   C   + +DA+ +  NM K    P+ VTY
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           NTL+ GL +T     A E+ + +L    +     +YN  +  LC    +  A   ++   
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741

Query: 601 CRGILPTTITWHILVRAVMNNG 622
             G+   T+T++I +  +   G
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEG 763



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/532 (30%), Positives = 256/532 (48%), Gaps = 56/532 (10%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++       + + G  PD Y+Y  VI  L +   +  A  + D+   RG +  V  Y IL
Sbjct: 142 DRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTIL 201

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
              F K G    A EI+  +       P+ + YN +I+G C+    D  LE    M + +
Sbjct: 202 TRAFCKTGRLKDALEIFRNI-----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D FTY   I GLCKA   + A  +  EMV+ G+  D VT+N+++DG C+AGK +   
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L  VM  + C  +  +YN LI GL +   VD A  + +         D  T+ +L +GL
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G +++A +                  LV  M   GC  N  T N+L++G  +ASK E
Sbjct: 377 CKRGRIDEAFE------------------LVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  L + +   G  P VV+Y  +++GLCK  R  +A   V+ ML++G  P +ITY+ L+
Sbjct: 419 KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478

Query: 476 NGLCQSKKIDMALKLCCQFLQK--------------GF------------------TPDV 503
            GLC++ ++D A  +  + + K              G+                  TP +
Sbjct: 479 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI 538

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN L+ G C  G++++   ++ +M  R CVPN+ TYN +MDGL K G  D+A      
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +      PD++SYNI + GL   S+  +A + L+  +  GI P  +T++ L+
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 650



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 285/566 (50%), Gaps = 58/566 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+++  ++AK  ++     G  PDV +Y  + +GL K G +  A  +  EM  +G   N
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN LIDG  K     +A E+ E LV  +   P+VVTY ++++GLCK GR D+ L+M 
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLV-SSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY---------- 279
           + M K        TY + + GLC+ G V+ A  +++EMV      DA+ Y          
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519

Query: 280 ----------------------NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
                                 NA++DG+C+ G++ E   ++E M  +GC+ N+ +YNI+
Sbjct: 520 SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + GL ++GKVDEA    E +    C  D  ++ ++I+GL K     +A Q+L+++ + G 
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           E R  DA  ++  M K G   +  T N+L++G  Q ++L +A  
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699

Query: 420 LFKEMSRKGCSPTV-VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           L  EM R GC  +   +YNT+I+ LCK     +A   +  M   G + + +TY++ I+ L
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK--KRNCVP 536
           C+  ++D A  L  +        D   Y  +I GLC A +++ A +L   M   K  C+ 
Sbjct: 760 CKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 816

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  T+N L+D   KT   D+AL +   +++    P +I+YN+ +  LC   ++  A+E  
Sbjct: 817 SH-TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           ++   RGI+ +++++ +L+  +   G
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLCGQG 901



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 265/540 (49%), Gaps = 56/540 (10%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L R +  + A  F     ++G K   ++    +  L+++G      A+F+ M + G   
Sbjct: 99  VLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAP 158

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +   Y+++I    +     +A  + ++  +     P V  Y ++    CK GR  + LE+
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVR-GFKPEVSVYTILTRAFCKTGRLKDALEI 217

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +    +N    D+  Y + IHG C+  + +GA    +EM E  +  D  TYN +IDG C+
Sbjct: 218 F----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCK 273

Query: 289 AGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A K  +  E L E++ R    + V++N ++ GL + GK + A S+  ++ E+NC     T
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+GLCK   +++A                    LV+     G   +  T + L +G
Sbjct: 334 YNTLISGLCKQQNVDRA------------------KDLVDEFVSSGFVPDVVTYSILADG 375

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  +++ A  L KEMS KGC+P +V+YNTLI+GLCK  +  +AY  ++ ++  G+ PD
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+++++GLC+  ++D ALK+    L++G TP V  Y  L+ GLC  G+V++A  ++ 
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 528 NMKKRNC--------------------------------VPNLVTYNTLMDGLFKTGDCD 555
            M  ++C                                 P +  YN LMDG  K G  D
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 555

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +   ++  +      P+I +YNI + GLC   ++ +AF FL      G +P  ++++I++
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 203/383 (53%), Gaps = 23/383 (6%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           +FT   F+  L + G+ +    ++  M+++G   D+ TY+ +I   C+  +I + F + +
Sbjct: 125 TFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184

Query: 301 VMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
               +G    VS Y IL R   + G++ +A+ I+  +     + D+  +  +I+G C+  
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKN 240

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
             + A++ L E                  M++     + +T N L++G  +ASK + A  
Sbjct: 241 DCDGALEFLKE------------------MNERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +  EM  +G +P  V++N++++GLCK  +F  A+S +  M E+  +P   TY+ LI+GLC
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           + + +D A  L  +F+  GF PDV  Y+IL  GLC  G++++A +L   M  + C PNLV
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNTL+DGL K    +KA E+   ++     PD+++Y I + GLC   R+  A + +   
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           L RG  P+ IT+  L+  +   G
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTG 485



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 255/505 (50%), Gaps = 40/505 (7%)

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           EL+E  +   + P+ V  ++I     K    DKAL + + M +  GC   +         
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALMEG 480

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A      +  K    D  +Y +++NG  KS     A  V D +  RG    
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPY- 537

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN L+DG+ K+G       ++E +     V PN+ TYN++++GLCK G+ DE     
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV-PNIKTYNIVMDGLCKHGKVDEAFPFL 596

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       D  +Y   I GL KA   + A +V  +M+++GI  DAVTYN ++  FC+ 
Sbjct: 597 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTT 347
            +  +   + + M + G   + V+YN LI GL +  ++ +A  +  E+LR     +  TT
Sbjct: 657 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 716

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  +I+ LCK G L +A+ +++ +   G                 EGRL +A+SL++ MD
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERF 449
               ++ +YT  +++ G  +A +L+ A  L +EM + KG   T  ++N LI+   K +R 
Sbjct: 777 TLRDEV-SYT--TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 833

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA + +  M+++G  P +ITY+++I  LC+  K+D A +L  +   +G       Y +L
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNC 534
           I+GLC  G+ ++ALQ+   M   +C
Sbjct: 894 IYGLCGQGRGKEALQVLEEMASSDC 918



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 186/438 (42%), Gaps = 70/438 (15%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLN 124
           DV  +++  Y K    D+  +VF+ M    GC   I         LC+  + ++A  FL 
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDM-ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S+   G  PDV SY  +I+GL K+     A  V D+M + G+  + V YN L+  F K+ 
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMI------------------------------- 213
            +  A  I + ++ +  V P+ VTYN +I                               
Sbjct: 658 RFDDAVGILKNMI-KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 716

Query: 214 -----NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
                + LCK G   + L + D M  +  E ++ TY  FI  LCK G ++ A  +  EM 
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM- 775

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKG-CLNVVSYNILIRGLLENGKV 326
                 D V+Y  +I G C+A ++    +L  E++  KG C+   ++N+LI    +  ++
Sbjct: 776 --DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 833

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           DEA+++  L+ ++ C+    T+ ++I  LCK   ++KA ++ +E                
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE---------------- 877

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   G   ++ +   L+ G     + + A+ + +EM+   C    + +  +       
Sbjct: 878 --MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPHSQFQ 935

Query: 447 ERFGEAYSFVKEMLEKGW 464
             FG  YS         W
Sbjct: 936 TTFGPCYSSFHSRFSSTW 953


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 181/650 (27%), Positives = 323/650 (49%), Gaps = 33/650 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRL-IDPKLVVHVSRIL 61
           +  K +  +++ + +P  AL +F+    E G+ H+   +  ++ +L +  K       + 
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCR 112
           E+ +       E V + +++ YG+     +A++VF+RM + + CE           IL  
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVE 123

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
              F +A +    + + G+ PDVY++   +     +G    AL + + M  +G E N V 
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  +I GF+K+   + A  +++ + ++  + P+++T+N +I+ LCK G   E  +++ ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEM-LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K     + FT+  FI GLC+ G ++ A R+   +V  G+  D ++YN +I GFC+  K+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 293 --KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
              EC+ L +++      N  +YN +I G  + G +  A  I      K    D  T+  
Sbjct: 303 VEAECY-LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LINGLC +G +N+A+ +  E  E G                 +G +  A  L+  M +HG
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  + +T N ++NG  +   L +A  +  +   KGC P + ++NTLI+G CK     +A 
Sbjct: 422 CSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             +  ML  G  PD+ITY+ L+NGLC+++K+D  +      L+KG TP++  YNILI   
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPD 572
           C   KV +A++L+  MK R   P++VT  TL+ GL   G+ DKA E++  I +E +    
Sbjct: 542 CKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYS 601

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +NI +   C    +S A +  +        P   T+ +++ +    G
Sbjct: 602 TAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 64/352 (18%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+N L  + + + A+A+F  A  E G+ HS  L++ +++ L    LV+   ++++ +   
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 68  KCY-----------------CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL 110
            C                  C  D    +  A  K  +PD    +F     I G      
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD----IFTFNTLIDG-----Y 471

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++R  +KA   L+++   G+ PDV +Y T++NGL K+  L   +  F  M E+G   N+
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT---------------------- 208
           + YNILI+ F K      A E+++ +     + P++VT                      
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTR-GLTPDIVTLCTLICGLCSNGELDKAYELFV 590

Query: 209 --------------YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                         +N+MIN  C+        +++ +M  ++   D++TY   I   CK 
Sbjct: 591 TIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKT 650

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           GN++ A     E +  G+     T   +++  C   ++ E   +  +M + G
Sbjct: 651 GNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 35/220 (15%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +M  + +  K++ A+ +F+ M    C P+V SYN ++N L +   F +A+          
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH---------- 131

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                              K+ M +K        G  PDV  + I +   C  G+   AL
Sbjct: 132 -------------------KVYMRMK------DIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L +NM  + C  N V+Y  ++ G +K     +A  +++ +L++ + PDI+++N  +  L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C    + ++ +  +  + RG+ P   T++I ++ +   GA
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 309/626 (49%), Gaps = 36/626 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           ++    +L  LK ++N  + L  F +      + H+   +  ++ RL     +  V  IL
Sbjct: 38  LLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYIL 97

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCR 112
           + +++    C ED+ + +I  Y +    ++AL +F R+ E FGC+  +         L  
Sbjct: 98  QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE-FGCKPTVRIYNHLLDALLS 156

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           + +F+       ++ + GL P+V++Y  ++  L K+  +  A  +F EM  +G   + V 
Sbjct: 157 ENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVT 216

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  ++    K G    A+E+  R        P+V  YN +I+G+CK GR +  +++   M
Sbjct: 217 YTTMVSSLCKAGKIDDARELAGRF------KPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
             N  + +  +Y   I+ LC +GNVE A  ++ +M   G   +  T+  +I G    GK+
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +LW++M + GC  NVV+YN LI GL  NG ++EA+ + + ++   C  + TT+ +L
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+G  K+G                   L  A+   NRM  HGC+ N  T   +++   + 
Sbjct: 391 IDGFAKSG------------------DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           S  + A  L ++M+ +GC+P  +++NT I GLC   R   A   ++ M   G  P++ TY
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L++ L +  K + A  L  +   +   P++  YN +++G   AG + +ALQL+     
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE-ERLRPDIISYNITLKGLCSCSRMS 590
           R   P+ +TYNT++    K G    A ++   +   +   PDII+Y   + G C+   + 
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 591 DAFEFLNDALCRGILPTTITWHILVR 616
           +A  FL+ A+ +GI P   TW+ LVR
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVR 638



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 242/484 (50%), Gaps = 27/484 (5%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +ING  + G    AL +F  + E G +  V  YN L+D    +  +     ++  +  + 
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM-KKD 173

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + PNV TYN+++  LCK  R D   +++  M       D+ TY + +  LCKAG ++ A
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233

Query: 261 ERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
               RE+  +G F  +V  YNA+IDG C+ G+I+   +L   M   G   NVVSY+ +I 
Sbjct: 234 ----REL--AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L  +G V+ A +++  +  + C+A+  T   LI G                      G+
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFM------------------RGK 329

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L +A  L   M + GC+ N    N+L++G      LE A+ +  +M R GC P V +Y+ 
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+G  K      A      M+  G +P+++TY+ +++ LC++   D A  L  +   +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            TP+   +N  I GLC  G+VE A++L   M+   C+PN+ TYN L+D LF+    ++A 
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++  I    L+P++++YN  L G      M +A +    AL RG  P +IT++ ++ A 
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569

Query: 619 MNNG 622
              G
Sbjct: 570 CKQG 573



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 194/424 (45%), Gaps = 59/424 (13%)

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           N  +  + TY   I  L +   ++  + + ++M   GI      +  +I+G+ R G  ++
Sbjct: 68  NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127

Query: 295 CFELWEVMGRKGC------------------------------------LNVVSYNILIR 318
             +++  +G  GC                                     NV +YNIL++
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L +N +VD A  ++  +  K C  D+ T+  +++ LCK                   G+
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCK------------------AGK 229

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + DA  L  R      K +    N+L++G  +  ++E AI L  EM   G  P VVSY+ 
Sbjct: 230 IDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +IN LC       A++   +M  +G   ++ T++ LI G     K+  AL L    +Q G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+V  YN LIHGLCS G +E+ALQ+   M++  C+PN+ TY+ L+DG  K+GD   A 
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E WN ++    RP++++Y   +  LC  S    A   +      G  P TIT++  ++ +
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464

Query: 619 MNNG 622
             NG
Sbjct: 465 CGNG 468


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 181/594 (30%), Positives = 297/594 (50%), Gaps = 48/594 (8%)

Query: 44  ILRRLIDPKLVVHVSRILELIE----------IQKCYCPEDVALSVIQAYGKNSMPDKAL 93
           ++ R+  P +V+ + + +E++           + KC+C        +  +GK +      
Sbjct: 90  VVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG--- 146

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
             F      F      LC + +  +A      L+ +  KP+V ++ T++NGL + G ++ 
Sbjct: 147 --FHPTVVTFNTLLHGLCVEDRISEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVE 200

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+ D M E G++ N + Y  ++DG  K GD + A  +  ++   + + PNVV YN +I
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTII 260

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +GL K GR  +   ++  M++ E   D  TY   I+G C +G    AE++ +EM+E  I 
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
            D VT++A+I+ F + GK  E  EL+ E++ R    + V+Y+ +I G  +  ++D A  +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           + L   K C+ D  T   LI G C+   ++  I++L+E+ E G                 
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-------- 427
            G L  A  L+  M   G   N  TCN+L++G     KL++A+ +FK M +         
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500

Query: 428 ---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P V +YN LI GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++      K F+PDV  +N LI G C AG V+D L+L+  M +R  V + +TY TL
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITL 620

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + G  K  + D AL+I+  ++   + PD I+    L GL S   +  A   L D
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 267/519 (51%), Gaps = 40/519 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C K  F  A      + + G  P V ++ T+++GL     +  AL +F +M     + NV
Sbjct: 129 CSKLPF--ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNV 182

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +  L++G  ++G  + A  + +R+ +E  + PN +TY  +++G+CK G     L +  
Sbjct: 183 VTFTTLMNGLCREGRVVEAVALLDRM-LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 231 RMKK-NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +M++ +    +   Y + I GL K G    A  ++ EM E  IF D VTYN MI+GFC +
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCIS 301

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +  +L  E++ RK   +VV+++ LI   ++ GK  EA  +++ +  ++    + T+
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+G CK                  + RL  A  +       GC  +  T N+L+ G+
Sbjct: 362 SSMIDGFCK------------------QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A ++++ I L  EM+  G     ++Y TLI+G C+V     A   ++EM+  G  P++
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQK------------GFTPDVTMYNILIHGLCSA 516
           +T + L++GLC + K+  AL++  + +QK            G  PDV  YNILI GL + 
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMF-KAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           GK  +A +LY  M  R  VP+ +TY++++DGL K    D+A ++++ +  +   PD++++
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           N  + G C    + D  E   +   RGI+   IT+  L+
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 246/495 (49%), Gaps = 36/495 (7%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + YS+  ++        L  AL+ F ++ + G    VV +N L+ G   +     A +++
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            ++       PNVVT+  ++NGLC+ GR  E + + DRM ++  + +  TY + + G+CK
Sbjct: 175 HQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 254 AGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            G+   A  + R+M E S I  + V YN +IDG  + G+  +   L+  M  K    ++V
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN +I G   +G+  +A  + + + E+  N D  T   LIN   K              
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVK-------------- 335

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+  +A  L + M       +  T +S+++GF + ++L+ A  +F     KGCSP
Sbjct: 336 ----EGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            ++++NTLI G C+ +R  +    + EM E G   + ITY+ LI+G CQ   ++ A  L 
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-----------CVPNLVT 540
            + +  G  P+V   N L+ GLC  GK++DAL+++  M+K               P++ T
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN L+ GL   G   +A E++  +    + PD I+Y+  + GLC  SR+ +A +  +   
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571

Query: 601 CRGILPTTITWHILV 615
            +   P  +T++ L+
Sbjct: 572 SKSFSPDVVTFNTLI 586



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 239/509 (46%), Gaps = 70/509 (13%)

Query: 91  KALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           +ALD+F +M +     F      LCR+ +  +A   L+ + E GL+P+  +YGT+++G+ 
Sbjct: 169 EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC 228

Query: 147 KSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           K GD + AL +  +M E   +  NVV YN +IDG +K G +  A  ++  +  E  ++P+
Sbjct: 229 KMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM-QEKEIFPD 287

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           +VTYN MING C  GR+ +  ++   M + +   D  T+ + I+   K G    AE +Y 
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           EM+   I    VTY++MIDGFC+  ++     ++ +   KGC  +++++N LI G     
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 325 KVDEAISIWELLREKNCNADSTT-----HG------------------------------ 349
           +VD+ I +   + E    A++ T     HG                              
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467

Query: 350 VLINGLCKNGYLNKAIQILNEVEEG----------------------------GEGRLAD 381
            L++GLC NG L  A+++   +++                              EG+  +
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLE 527

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L   M   G   +  T +S+++G  + S+L+ A  +F  M  K  SP VV++NTLI 
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     +      EM ++G   D ITY  LI G  +   ID AL +  + +  G  P
Sbjct: 588 GYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYP 647

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           D      ++ GL S  ++E A+ +  +++
Sbjct: 648 DTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 220/448 (49%), Gaps = 32/448 (7%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V+ +  ++  + + GR D  + +  +M+      +++++   +   C    +  A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           + ++ + G     VT+N ++ G C   +I E  +L+  M +    NVV++  L+ GL   
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKP---NVVTFTTLMNGLCRE 195

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           G+V EA+++ + + E     +  T+G +++G+CK G    A+ +L ++EE          
Sbjct: 196 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVI 255

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +GR +DA +L   M +     +  T N ++NGF  + +  +A  L +EM 
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +  +P VV+++ LIN   K  +F EA     EML +   P  +TYS +I+G C+  ++D
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +      KG +PD+  +N LI G C A +V+D ++L   M +   V N +TY TL+
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN-------- 597
            G  + GD + A ++   ++   + P++++ N  L GLC   ++ DA E           
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 598 -DA--LCRGILPTTITWHILVRAVMNNG 622
            DA     G+ P   T++IL+  ++N G
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEG 523



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 15/225 (6%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   L++AI LF  M R    P+V+ +  L+  + ++ R     S  K+M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              +  ++++L+   C   K+  AL    +  + GF P V  +N L+HGLC   ++ +AL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M    C PN+VT+ TLM+GL + G   +A+ + + +LE+ L+P+ I+Y   + G+
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 584 CSCSRMSDAFEFLNDALCRG------ILPTTITWHILVRAVMNNG 622
           C   +M D    LN  L R       I+P  + ++ ++  +  +G
Sbjct: 228 C---KMGDTVSALN--LLRKMEEVSHIIPNVVIYNTIIDGLWKDG 267



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 44/213 (20%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS-- 58
           M I A R  N    E +  T   L      E  +  +  L+  +  R I P  + + S  
Sbjct: 494 MDIDASRPFN--GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 59  -------RILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
                  R+ E  ++      K + P+ V   ++I  Y K  M D  L++F        C
Sbjct: 552 DGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELF--------C 603

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           E G                   ++G+  D  +Y T+I G  K  ++ GAL +F EM   G
Sbjct: 604 EMG-------------------QRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           V  + +    ++ G + K +  RA  + E L M
Sbjct: 645 VYPDTITIRNMLTGLWSKEELERAVAMLEDLQM 677


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 181/650 (27%), Positives = 323/650 (49%), Gaps = 33/650 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRL-IDPKLVVHVSRIL 61
           +  K +  +++ + +P  AL +F+    E G+ H+   +  ++ +L +  K       + 
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCR 112
           E+ +       E V + +++ YG+     +A++VF+RM + + CE           IL  
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVE 123

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
              F +A +    + + G+ PDVY++   +     +G    AL + + M  +G E N V 
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  +I GF+K+   + A  +++ + ++  + P+++T+N +I+ LCK G   E  +++ ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEM-LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K     + FT+  FI GLC+ G ++ A R+   +V  G+  D ++YN +I GFC+  K+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 293 --KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
              EC+ L +++      N  +YN +I G  + G +  A  I      K    D  T+  
Sbjct: 303 VEAECY-LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LINGLC +G +N+A+ +  E  E G                 +G +  A  L+  M +HG
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  + +T N ++NG  +   L +A  +  +   KGC P + ++NTLI+G CK     +A 
Sbjct: 422 CSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             +  ML  G  PD+ITY+ L+NGLC+++K+D  +      L+KG TP++  YNILI   
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPD 572
           C   KV +A++L+  MK R   P++VT  TL+ GL   G+ DKA E++  I +E +    
Sbjct: 542 CKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYS 601

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +NI +   C    +S A +  +        P   T+ +++ +    G
Sbjct: 602 TAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 64/352 (18%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+N L  + + + A+A+F  A  E G+ HS  L++ +++ L    LV+   ++++ +   
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 68  KCY-----------------CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL 110
            C                  C  D    +  A  K  +PD    +F     I G      
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD----IFTFNTLIDG-----Y 471

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++R  +KA   L+++   G+ PDV +Y T++NGL K+  L   +  F  M E+G   N+
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT---------------------- 208
           + YNILI+ F K      A E+++ +     + P++VT                      
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTR-GLTPDIVTLCTLICGLCSNGELDKAYELFV 590

Query: 209 --------------YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                         +N+MIN  C         +++ +M  ++   D++TY   I   CK 
Sbjct: 591 TIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKT 650

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           GN++ A     E +  G+     T   +++  C   ++ E   +  +M + G
Sbjct: 651 GNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 35/220 (15%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +M  + +  K++ A+ +F+ M    C P+V SYN ++N L +   F +A+          
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH---------- 131

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                              K+ M +K        G  PDV  + I +   C  G+   AL
Sbjct: 132 -------------------KVYMRMK------DIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L +NM  + C  N V+Y  ++ G +K     +A  +++ +L++ + PDI+++N  +  L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C    + ++ +  +  + RG+ P   T++I ++ +   GA
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 286/557 (51%), Gaps = 48/557 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + ++A  F   +   G  PD  +Y T+++GL K+G L  A  V   + E      
Sbjct: 151 LCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPT 210

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  + I +DG  K G+   A E ++ +  +T V PN VTY+ +I+GLCK G+ D  L + 
Sbjct: 211 VFTFTIAVDGLSKAGNLTGAYEFFDSMP-QTGVSPNTVTYDALIDGLCKAGKLDIALGL- 268

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             ++    +   F + S +HGLC+A  +E A ++ + M       + V +N++++G C+A
Sbjct: 269 --LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQA 323

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE-KNCNADSTT 347
            ++ E FEL++VM   GC  +V++YNIL++GL +  ++ EA    EL+R  + C+ +  T
Sbjct: 324 RRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVT 383

Query: 348 HGVLINGLCKNGYLNKAIQILNEVE--EGGEGRLADAASLVNRMDKHG------------ 393
              LI GLC  G +N+A ++   +   EG        A L+  + K G            
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443

Query: 394 -------------------------CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                                    C+    T N+L+ G  ++  + +A+ L + M   G
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            SP V+++N++++GLCK +R  +A++  K  LE+G +P+++TYS LI+GL +  K+D AL
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  + ++ G   +   Y+ ++ GL   G++EDA+ +   M+   C+P+ VTYNTL+DG 
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
           FK     +A+ +   +LE    P +++Y     GLC   R  +A E L+    RG  P  
Sbjct: 624 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 683

Query: 609 ITWHILVRAVMNNGAST 625
           IT+  +V  +   G  T
Sbjct: 684 ITYSSIVDGLCKAGRVT 700



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 178/601 (29%), Positives = 290/601 (48%), Gaps = 106/601 (17%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + E A   L  L E    P V+++   ++GL K+G+L GA   FD M + GV  N
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245

Query: 170 VVCYNILIDGFFKKGDY------MRAK----------------------EIWERLVMETS 201
            V Y+ LIDG  K G        +R K                      E   +L+    
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY----------------- 244
             PNVV +N ++NGLC+  R DE  E++D MK++    D  TY                 
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 245 -----------CS--------FIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMID 284
                      CS         I GLC AG V  A  VY  MV   GI  +  TY  +++
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425

Query: 285 GFCRAG---KIKECFEL-----------WEV--------MGRKGCLNVVSYNILIRGLLE 322
           G C+AG   ++++CFE            W +        M +     +V+YN L+ GL +
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSK 485

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           +G V +A+ + E + E   + D  T   +++GLCK                  E R+ DA
Sbjct: 486 SGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK------------------EQRILDA 527

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            ++  R  + GC+ N  T ++L++G  + +K++ A+ L  +M   GC    V+Y+T+++G
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L KV R  +A   +++M + G  PD +TY+ LI+G  + +++  A+ L  + L+ GF P 
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 647

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  Y  L HGLC +G+ ++A+++   M  R C PN +TY++++DGL K G   +AL  + 
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707

Query: 563 HIL-EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            +  +E + P +I+Y+  + GLC   R+ +A+EFL   +  G +P  +T+ IL+  + + 
Sbjct: 708 KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 767

Query: 622 G 622
           G
Sbjct: 768 G 768



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/584 (29%), Positives = 290/584 (49%), Gaps = 53/584 (9%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE-KGLKPDVYSYG 139
           D+A ++F  M E  GC A +         LC+ R+  +A R +  +   +G  P+V ++ 
Sbjct: 327 DEAFELFDVMKE-SGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 140 TVINGLVKSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV- 197
           T+I GL  +G +  A  V++ M    G+  N   Y  L++G  K GD  R ++ +E+++ 
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 198 -------------------METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
                              M     P +VTYN ++ GL K G   + L + + M ++   
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  T+ S + GLCK   +  A  V++  +E G   + VTY+ +IDG  +  K+ E  +L
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M   GC  N V+Y+ ++ GLL+ G++++A+ +   +R+  C  D+ T+  LI+G  K
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
              L +A+ +L E+ E G                  GR  +A  +++ M   GC  NA T
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
            +S+++G  +A ++  A+  F++M+R +  +P V++Y+ LI+GLCK  R  EAY F++ M
Sbjct: 686 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +  G  PD++T+S+LINGLC + +ID  L+L C   ++G   D+  YN +I+  C  G+ 
Sbjct: 746 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
             A  L   MK      N VT+  ++  L      D+A+  + H + E  R D ISYN  
Sbjct: 806 SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF-HSIPEDCR-DEISYNTL 863

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  L +  R   A E L   +  G  P    +  ++  +   G+
Sbjct: 864 ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGS 907



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 303/605 (50%), Gaps = 49/605 (8%)

Query: 36   HSPHLFHHILRRLIDPKLVVH------------VSRILELIE--IQKCYCPEDVAL-SVI 80
            HSP +   ++ ++  P LV +            V   L L+E  I+    P+ +   SV+
Sbjct: 457  HSPEV-DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515

Query: 81   QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGL 131
                K      A +VF+R  E  GC   +         L +  + ++A + L  + E G 
Sbjct: 516  DGLCKEQRILDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 574

Query: 132  KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            + +  +Y TV++GL+K G +  A+ V  +M + G   + V YN LIDGFFK+     A  
Sbjct: 575  RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 192  IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
            +  R ++E   +P+VVTY  + +GLC+ GRFDE +E+ D M       ++ TY S + GL
Sbjct: 635  LL-REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 693

Query: 252  CKAGNVEGAERVYREMVESGIFVD-AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
            CKAG V  A   + +M    +     + Y+A+IDG C+AG+I E +E  E M R G + +
Sbjct: 694  CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPD 753

Query: 310  VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            VV+++ILI GL + G++D  + ++  + E+ C AD   +  +IN  C  G  + A  +L 
Sbjct: 754  VVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLE 813

Query: 370  EVEEGGEGRLADAASLV-------NRMDK---------HGCKLNAYTCNSLMNGFIQASK 413
            E++  G  +      +V       +R+D+           C+ +  + N+L+   + + +
Sbjct: 814  EMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR-DEISYNTLITSLVASRR 872

Query: 414  LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
             E A+ L + M   G SP   +Y T+++GL K      A   ++EM  +G  PD+ TY++
Sbjct: 873  SEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTI 932

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            +I+GL ++K++ +A     + L+K   PD  +Y+ LI   C A KV+DA +L   ++   
Sbjct: 933  MISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSG 989

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              P +  Y+T++D L K    DKALE+   +  +   P I  +        +  R+ +A 
Sbjct: 990  IEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAV 1049

Query: 594  EFLND 598
            + +ND
Sbjct: 1050 KLVND 1054



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 263/530 (49%), Gaps = 49/530 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + +K  + L  +  +G  P+  +Y T++N L+  G    A ++ + M   G    
Sbjct: 46  LCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPE 105

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ + ++I G  K+G+   A  + + +V +    P+V  + V+++ LC+ GR DE    +
Sbjct: 106 LITFGLIIKGLCKEGEIEAAFRVVDEMV-DRGFVPDVEIHTVLLHALCELGRVDEAWFFF 164

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++       D+ TY + + GL KAG +E A  V + + ES       T+   +DG  +A
Sbjct: 165 QQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKA 224

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   +E ++ M + G   N V+Y+ LI GL + GK+D A+    LLR+KN  A     
Sbjct: 225 GNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALG---LLRDKNSQAGMFAF 281

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L++GLC+   L +AIQ+L  +                      C  N    NSLMNG 
Sbjct: 282 SSLLHGLCQAHRLEEAIQLLKAMP---------------------CVPNVVCFNSLMNGL 320

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE-KGWKPD 467
            QA +++ A  LF  M   GCS  V++YN L+ GLCK+ R  EAY  V+ M   +G  P+
Sbjct: 321 CQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPN 380

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++T+S LI GLC + +++ A ++  + +  +G +P+   Y  L+ GLC AG      Q +
Sbjct: 381 VVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCF 440

Query: 527 SNMKKRN---------------------CVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
             M +R                      C P LVTYNTL+ GL K+G    AL +   ++
Sbjct: 441 EQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMI 500

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           E  L PD+I++N  L GLC   R+ DA      AL RG  P  +T+  L+
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 186/703 (26%), Positives = 325/703 (46%), Gaps = 88/703 (12%)

Query: 2    VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            V+    L+N L   +    A  LFD   +E G +     ++ +L+ L   + +    R +
Sbjct: 310  VVCFNSLMNGLCQARRVDEAFELFD-VMKESGCSADVITYNILLKGLCKLRRIPEAYRHV 368

Query: 62   ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFG---------------C 105
            EL+   +   P  V  S +IQ        ++A +V++RM  + G               C
Sbjct: 369  ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLC 428

Query: 106  EAGI-----LCRKRQFEKAKRFLNS----------LWEKGLKPDVYSYGTVINGLVKSGD 150
            +AG       C ++  E+  R  +S          L  +  +P + +Y T++ GL KSG 
Sbjct: 429  KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488

Query: 151  LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
            +  AL + + M E G+  +V+ +N ++DG  K+   + A  +++R  +E    PNVVTY+
Sbjct: 489  VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR-ALERGCRPNVVTYS 547

Query: 211  VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
             +I+GL K  + DE L++  +M +     ++ TY + + GL K G +E A  V R+M ++
Sbjct: 548  TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 607

Query: 271  GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
            G   DAVTYN +IDGF +  +++E   L   M   G   +VV+Y  L  GL  +G+ DEA
Sbjct: 608  GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 667

Query: 330  ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--------------- 374
            + I + +  + C  ++ T+  +++GLCK G + +A+    ++                  
Sbjct: 668  VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 727

Query: 375  ---GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 GR+ +A   + RM + G   +  T + L+NG   A +++  + LF  M+ +GC  
Sbjct: 728  GLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKA 787

Query: 432  TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID------ 485
             + +YN +IN  C    F  AY+ ++EM   G   + +T+ ++I  LC + +ID      
Sbjct: 788  DIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF 847

Query: 486  ---------------------------MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
                                        AL+L    +  G +PD   Y  ++ GL  AG 
Sbjct: 848  HSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGS 907

Query: 519  VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
             E A +L   M+ R   P+L TY  ++ GL K      A + +  +L + L+PD I Y+ 
Sbjct: 908  PEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSS 967

Query: 579  TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +   C   ++ DA++ L  +   GI PT   +  +V ++  N
Sbjct: 968  LIDAFCKADKVDDAWKLLRSS---GIEPTITMYSTMVDSLCKN 1007



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 233/457 (50%), Gaps = 30/457 (6%)

Query: 112  RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
            ++++  +A   L  + E G  P V +Y T+ +GL +SG    A+ + D M  RG   N +
Sbjct: 625  KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 684

Query: 172  CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             Y+ ++DG  K G    A   +E++  +  V P+V+ Y+ +I+GLCK GR DE  E  +R
Sbjct: 685  TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744

Query: 232  MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
            M +  R  D  T+   I+GLC AG ++    ++  M E G   D   YNAMI+ +C  G+
Sbjct: 745  MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804

Query: 292  IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
                + L E M   G   N V++ I+I+ L  N ++DEA+S +  + E +C  D  ++  
Sbjct: 805  FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCR-DEISYNT 862

Query: 351  LINGLCKNGYLNKAIQILNE-VEEGGEGRLADAASLVNRMDKHGCKLNAYTCN--SLMNG 407
            LI  L  +    +A+++L   V +GG     DA                  CN  ++M+G
Sbjct: 863  LITSLVASRRSEQALELLRAMVADGGS---PDA------------------CNYMTVMDG 901

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
              +A   E A  L +EM  +G SP + +Y  +I+GL K ++   A  + +EML K  KPD
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             I YS LI+  C++ K+D A KL       G  P +TMY+ ++  LC     + AL++  
Sbjct: 962  AIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             MK +NC P +  + +L       G  D+A+++ N +
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 225/421 (53%), Gaps = 30/421 (7%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           +VTYNV+INGLCK GR  +    + +  +        TY + I GLC+   V+   ++  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           EM   G   +AVTYN +++     G+ KE F L E M   GC   ++++ ++I+GL + G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           +++ A  + + + ++    D   H VL++ LC+ G +++A     +V             
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV------------L 168

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L+      G   +A T N++++G  +A +LE A  + + ++    SPTV ++   ++GL 
Sbjct: 169 LI------GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLS 222

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K      AY F   M + G  P+ +TY  LI+GLC++ K+D+AL L      K     + 
Sbjct: 223 KAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMF 279

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            ++ L+HGLC A ++E+A+QL   +K   CVPN+V +N+LM+GL +    D+A E+++ +
Sbjct: 280 AFSSLLHGLCQAHRLEEAIQL---LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVM 336

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR---GILPTTITWHILVRAVMNN 621
            E     D+I+YNI LKGLC   R+ +A+  +   L R   G  P  +T+  L++ + N 
Sbjct: 337 KESGCSADVITYNILLKGLCKLRRIPEAYRHVE--LMRRTEGCSPNVVTFSTLIQGLCNA 394

Query: 622 G 622
           G
Sbjct: 395 G 395



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 73/332 (21%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  + ++A  FL  +   G  PDV ++  +INGL  +G +   L +F  M ERG + +
Sbjct: 729  LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKAD 788

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC---- 225
            +  YN +I+ +  KG++  A  + E +     +  N VT+ ++I  LC   R DE     
Sbjct: 789  IYAYNAMINAYCLKGEFSAAYALLEEMKTH-GIAKNTVTHGIVIKALCGNDRIDEAVSYF 847

Query: 226  -----------------------------LEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                                         LE+   M  +    D+  Y + + GL KAG+
Sbjct: 848  HSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGS 907

Query: 257  VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
             E A ++ +EM   G   D  TY  MI G  +A ++    + +E M RK    + + Y+ 
Sbjct: 908  PEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSS 967

Query: 316  LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN----------------- 358
            LI    +  KVD+A   W+LLR        T +  +++ LCKN                 
Sbjct: 968  LIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKN 1024

Query: 359  ------------------GYLNKAIQILNEVE 372
                              G +++A++++N+++
Sbjct: 1025 CEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 309/626 (49%), Gaps = 36/626 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           ++    +L  LK ++N  + L  F +      + H+   +  ++ RL     +  V  IL
Sbjct: 38  LLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYIL 97

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCR 112
           + +++    C ED+ + +I  Y +    ++AL +F R+ E FGC+  +         L  
Sbjct: 98  QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE-FGCKPTVRIYNHLLDALLS 156

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           + +F+       ++ + GL P+V++Y  ++  L K+  +  A  +F EM  +G   + V 
Sbjct: 157 ENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVT 216

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  ++    K G    A+E+  R        P+V  YN +I+G+CK GR +  +++   M
Sbjct: 217 YTTMVSSLCKAGKIDDARELAGRF------KPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
             N  + +  +Y   I+ LC +GNVE A  ++ +M   G   +  T+  +I G    GK+
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +LW++M + GC  NVV+YN LI GL  NG ++EA+ + + ++   C  + TT+ +L
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+G  K+G                   L  A+   NRM  HGC+ N  T   +++   + 
Sbjct: 391 IDGFAKSG------------------DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           S  + A  L ++M+ +GC+P  +++NT I GLC   R   A   ++ M   G  P++ TY
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L++ L +  K + A  L  +   +   P++  YN +++G   AG + +ALQL+     
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE-ERLRPDIISYNITLKGLCSCSRMS 590
           R   P+ +TYNT++    K G    A ++   +   +   PDII+Y   + G C+   + 
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 591 DAFEFLNDALCRGILPTTITWHILVR 616
           +A  FL+ A+ +GI P   TW+ LVR
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVR 638



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 243/484 (50%), Gaps = 27/484 (5%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +ING  + G    AL +F  + E G +  V  YN L+D    +  +     ++  +  + 
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM-KKD 173

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + PNV TYN+++  LCK  R D   +++  M       D+ TY + +  LCKAG ++ A
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233

Query: 261 ERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
               RE+  +G F  +V  YNA+IDG C+ G+I+   +L  E+M      NVVSY+ +I 
Sbjct: 234 ----REL--AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L  +G V+ A +++  +  + C+A+  T   LI G                      G+
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFM------------------RGK 329

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L +A  L   M + GC+ N    N+L++G      LE A+ +  +M R GC P V +Y+ 
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+G  K      A      M+  G +P+++TY+ +++ LC++   D A  L  +   +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            TP+   +N  I GLC  G+VE A++L   M+   C+PN+ TYN L+D LF+    ++A 
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++  I    L+P++++YN  L G      M +A +    AL RG  P +IT++ ++ A 
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569

Query: 619 MNNG 622
              G
Sbjct: 570 CKQG 573


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 267/508 (52%), Gaps = 23/508 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E   +FL S+  +G  PD+    ++I G  + G    A  V + + + G   +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN+LI G+ K G+   A ++ +R+    +V P+VVTYN ++  LC  G+  + +E+ 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  + E   D  TY   I   CK   V  A ++  EM   G   D VTYN +I+G C+ 
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K C+    T 
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L +AI IL                   +M  HGC  N+ + N L++GF
Sbjct: 360 NILINFLCRQGLLGRAIDIL------------------EKMPMHGCTPNSLSYNPLLHGF 401

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ AI     M  +GC P +V+YNTL+  LCK  +   A   + ++  KG  P +
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL +  K + A+KL  +  +KG  PD+  Y+ L+ GL   GKV++A++ + +
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++     PN +TYN++M GL K+   D+A++   +++ +R +P   +Y I ++G+     
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 581

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVR 616
             +A + LN+   RG++  +    + V+
Sbjct: 582 AKEALDLLNELCSRGLVKKSSAEQVAVK 609



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 240/447 (53%), Gaps = 25/447 (5%)

Query: 198 METSVY----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           +E+ VY    P+++    +I G C+ G+  +   + + ++++    D  TY   I G CK
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
           +G ++ A +V   M    +  D VTYN ++   C +GK+K+  E+ +   +K C  +V++
Sbjct: 197 SGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ILI    +   V +A+ + + +R K    D  T+ VLING+CK G L++AI+ LN + 
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 313

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             G                  GR  DA  L++ M + GC  +  T N L+N   +   L 
Sbjct: 314 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 373

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            AI + ++M   GC+P  +SYN L++G CK ++   A  ++  M+ +G  PD++TY+ L+
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 433

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
             LC+  K+D+A+++  Q   KG +P +  YN +I GL   GK E A++L   M+++   
Sbjct: 434 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+++TY++L+ GL + G  D+A++ ++ +    +RP+ I+YN  + GLC   +   A +F
Sbjct: 494 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L   + +   PT  T+ IL+  +   G
Sbjct: 554 LAYMISKRCKPTEATYTILIEGIAYEG 580



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 16/358 (4%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           AL + D     P        ++ ILR L D   +     +L+    ++CY P+ +  ++ 
Sbjct: 203 ALQVLDRMNVAPDVV----TYNTILRTLCDSGKLKQAMEVLDRQLQKECY-PDVITYTIL 257

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I+A  K S   +A+ +   M           +      +C++ + ++A +FLN++   G 
Sbjct: 258 IEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 317

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P+V ++  ++  +  +G  + A  +  +M  +G   +VV +NILI+   ++G   RA +
Sbjct: 318 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 377

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I E++ M     PN ++YN +++G CK  + D  +E  D M       D  TY + +  L
Sbjct: 378 ILEKMPMH-GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK G V+ A  +  ++   G     +TYN +IDG  + GK +   +L + M RKG   ++
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++Y+ L+ GL   GKVDEAI  +  L       ++ T+  ++ GLCK+   ++AI  L
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 161/329 (48%), Gaps = 13/329 (3%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P+ V  +V I    K    D+A+     M   +GC+  +         +C   ++  A++
Sbjct: 284 PDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNVITHNIILRSMCSTGRWMDAEK 342

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L+ +  KG  P V ++  +IN L + G L  A+ + ++M   G   N + YN L+ GF 
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+    RA E  + +++    YP++VTYN ++  LCK G+ D  +E+ +++         
Sbjct: 403 KEKKMDRAIEYLD-IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY + I GL K G  E A ++  EM   G+  D +TY++++ G  R GK+ E  + +  
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +   G   N ++YN ++ GL ++ + D AI     +  K C     T+ +LI G+   G 
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 581

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRM 389
             +A+ +LNE+   G  + + A  +  +M
Sbjct: 582 AKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 129/216 (59%), Gaps = 5/216 (2%)

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKP 466
            ++  +LE+     + M  +G  P ++   +LI G C++ +  +A ++V E+LE+ G  P
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKA-TWVMEILEQSGAVP 182

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ITY++LI+G C+S +ID AL++     +    PDV  YN ++  LC +GK++ A+++ 
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
               ++ C P+++TY  L++   K     +A+++ + +  +  +PD+++YN+ + G+C  
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+ +A +FLN+    G  P  IT +I++R++ + G
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 60  ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           ILE + +  C  P  ++ + ++  + K    D+A++    M    GC   I         
Sbjct: 378 ILEKMPMHGC-TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTA 435

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A   LN L  KG  P + +Y TVI+GL K G    A+ + DEM  +G++ +
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ Y+ L+ G  ++G    A + +  L     + PN +TYN ++ GLCK  + D  ++  
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
             M     +    TY   I G+   G  + A  +  E+   G+
Sbjct: 555 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 267/508 (52%), Gaps = 23/508 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E   +FL S+  +G  PD+    ++I G  + G    A  V + + + G   +
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN+LI G+ K G+   A ++ +R+    +V P+VVTYN ++  LC  G+  + +E+ 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  + E   D  TY   I   CK   V  A ++  EM   G   D VTYN +I+G C+ 
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K C+    T 
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L +AI IL                   +M  HGC  N+ + N L++GF
Sbjct: 303 NILINFLCRQGLLGRAIDIL------------------EKMPMHGCTPNSLSYNPLLHGF 344

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ AI     M  +GC P +V+YNTL+  LCK  +   A   + ++  KG  P +
Sbjct: 345 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL +  K + A+KL  +  +KG  PD+  Y+ L+ GL   GKV++A++ + +
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++     PN +TYN++M GL K+   D+A++   +++ +R +P   +Y I ++G+     
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVR 616
             +A + LN+   RG++  +    + V+
Sbjct: 525 AKEALDLLNELCSRGLVKKSSAEQVAVK 552



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 240/447 (53%), Gaps = 25/447 (5%)

Query: 198 METSVY----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           +E+ VY    P+++    +I G C+ G+  +   + + ++++    D  TY   I G CK
Sbjct: 80  LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 139

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
           +G ++ A +V   M    +  D VTYN ++   C +GK+K+  E+ +   +K C  +V++
Sbjct: 140 SGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 196

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ILI    +   V +A+ + + +R K    D  T+ VLING+CK G L++AI+ LN + 
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 256

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             G                  GR  DA  L++ M + GC  +  T N L+N   +   L 
Sbjct: 257 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 316

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            AI + ++M   GC+P  +SYN L++G CK ++   A  ++  M+ +G  PD++TY+ L+
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 376

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
             LC+  K+D+A+++  Q   KG +P +  YN +I GL   GK E A++L   M+++   
Sbjct: 377 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+++TY++L+ GL + G  D+A++ ++ +    +RP+ I+YN  + GLC   +   A +F
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L   + +   PT  T+ IL+  +   G
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEG 523



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 16/358 (4%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           AL + D     P        ++ ILR L D   +     +L+    ++CY P+ +  ++ 
Sbjct: 146 ALQVLDRMNVAPDVVT----YNTILRTLCDSGKLKQAMEVLDRQLQKECY-PDVITYTIL 200

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I+A  K S   +A+ +   M           +      +C++ + ++A +FLN++   G 
Sbjct: 201 IEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 260

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P+V ++  ++  +  +G  + A  +  +M  +G   +VV +NILI+   ++G   RA +
Sbjct: 261 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 320

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I E++ M     PN ++YN +++G CK  + D  +E  D M       D  TY + +  L
Sbjct: 321 ILEKMPMH-GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK G V+ A  +  ++   G     +TYN +IDG  + GK +   +L + M RKG   ++
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++Y+ L+ GL   GKVDEAI  +  L       ++ T+  ++ GLCK+   ++AI  L
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 161/329 (48%), Gaps = 13/329 (3%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P+ V  +V I    K    D+A+     M   +GC+  +         +C   ++  A++
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNVITHNIILRSMCSTGRWMDAEK 285

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L+ +  KG  P V ++  +IN L + G L  A+ + ++M   G   N + YN L+ GF 
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+    RA E  + +++    YP++VTYN ++  LCK G+ D  +E+ +++         
Sbjct: 346 KEKKMDRAIEYLD-IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY + I GL K G  E A ++  EM   G+  D +TY++++ G  R GK+ E  + +  
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +   G   N ++YN ++ GL ++ + D AI     +  K C     T+ +LI G+   G 
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRM 389
             +A+ +LNE+   G  + + A  +  +M
Sbjct: 525 AKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 129/216 (59%), Gaps = 5/216 (2%)

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKP 466
            ++  +LE+     + M  +G  P ++   +LI G C++ +  +A ++V E+LE+ G  P
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKA-TWVMEILEQSGAVP 125

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ITY++LI+G C+S +ID AL++     +    PDV  YN ++  LC +GK++ A+++ 
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
               ++ C P+++TY  L++   K     +A+++ + +  +  +PD+++YN+ + G+C  
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+ +A +FLN+    G  P  IT +I++R++ + G
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 60  ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           ILE + +  C  P  ++ + ++  + K    D+A++    M    GC   I         
Sbjct: 321 ILEKMPMHGC-TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTA 378

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A   LN L  KG  P + +Y TVI+GL K G    A+ + DEM  +G++ +
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ Y+ L+ G  ++G    A + +  L     + PN +TYN ++ GLCK  + D  ++  
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
             M     +    TY   I G+   G  + A  +  E+   G+
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 175/646 (27%), Positives = 340/646 (52%), Gaps = 38/646 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           ++  K +  +LK +K+P  AL++F+S  +E G+ H+   +  ++ +L        + R+L
Sbjct: 4   ILLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVL 63

Query: 62  ELIEIQ-KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
             + +       E V +S ++ YG+     +A+DVF+RM + + CE  I         L 
Sbjct: 64  MEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERM-DFYNCEPSIFSYNAIMNILV 122

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
               F +A +    +  +G+ PDV ++   I    ++   L AL + + M  +G E N V
Sbjct: 123 EYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAV 182

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  +I GF+++   + A E++ ++ +   ++P++ T+N +++ LCK G   E  ++ ++
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKM-LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNK 241

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGA-------ERVYREMVESGIFVDAVTYNAMID 284
           + KN    + FT+  FI GLC+ G +EGA       E    +MV  G+  D  TYN +I 
Sbjct: 242 VLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIY 301

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+ + GKI++   + +    KG + +  +Y  LI G+ ++G +D A++++E    K    
Sbjct: 302 GYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKP 361

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLV 386
               +  LI GL + G + KA+Q++N++ + G                  G ++DA +L+
Sbjct: 362 SIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL 421

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           N     G   + +T N+L++G+ +  K++NAI +   M   G +P V++YN+++NGLCK 
Sbjct: 422 NAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKA 481

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  +     K ++EKG  P++ITY++LI  LC+++K+  AL L  +   +G  PD   +
Sbjct: 482 AKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF 541

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-TYNTLMDGLFKTGDCDKALEIWNHIL 565
             +I G C+ G +++A QL+  M+++  + + V TYN +++   +  D D A ++++ + 
Sbjct: 542 GTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMG 601

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           ++   PD  +Y + + G C    ++  ++FL   +  G +P+  T+
Sbjct: 602 DKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 282/589 (47%), Gaps = 55/589 (9%)

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKR---------QFEKAKRF 122
           P+ VA   +  Y K+  P KAL +F  + +  G +   L  KR         +F+  +R 
Sbjct: 7   PKHVA--AVLKYQKD--PLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERV 62

Query: 123 L--------NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           L        NSL E      + +YG       + G +  A+ VF+ M     E ++  YN
Sbjct: 63  LMEMRLNVDNSLLEGVYVSAMRNYG-------RKGKVQEAVDVFERMDFYNCEPSIFSYN 115

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            +++   + G + +A +++ R+  E  + P+V T+ + I   C+  R    L + + M  
Sbjct: 116 AIMNILVEYGYFNQAHKVYLRMKHE-GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPS 174

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              E ++  YC+ I G  +      A  ++ +M+  GIF    T+N ++   C+ G ++E
Sbjct: 175 QGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQE 234

Query: 295 CFELWEVMGRKG-CLNVVSYNILIRGL-----LE--NGKVDEAISIWELLREKNCNADST 346
             +L   + + G C N+ ++NI I+GL     LE  N KV EA +    +  K    D  
Sbjct: 235 GEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDF 294

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  +I G  K G +  A +IL + +  G                 +G +  A +L    
Sbjct: 295 TYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA 354

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G K +    N+L+ G  Q   +  A+ L  +MS++G SP + +YN +INGLCK+   
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCV 414

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A + +   + KG+ PD+ T++ LI+G C+  K+D A+ +       G TPDV  YN +
Sbjct: 415 SDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           ++GLC A K ED ++ +  + ++ C+PN++TYN L++ L K     +AL++   I    L
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRA 617
            PD +S+   + G C+   + +A++       +  I  T  T++I++ A
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINA 583



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 213/396 (53%), Gaps = 21/396 (5%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + + A R L     KG  PD ++Y ++I G+ + GD+  ALA+F+E   +G++ ++V YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI G  ++G  ++A ++   +  E  + P++ TYN++INGLCK G   +   + +    
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKE-GMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D FT+ + I G CK   ++ A  +   M   G+  D +TYN++++G C+A K ++
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             E ++++  KGCL N+++YNILI  L +  KV EA+ + E +R +    D  + G +I+
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G C NG L++A Q+   +E+  + R+    +               T N ++N F +   
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQ--QYRICHTVA---------------TYNIMINAFSEKLD 589

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ A  LF EM  KGC P   +Y  +I+G CKV      Y F+ + +E G+ P + T+  
Sbjct: 590 MDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGR 649

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPD--VTMYN 507
           +IN LC   ++  A+ +    ++ G  P+  VT+++
Sbjct: 650 VINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFD 685



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++ + + A   L+S+W  G+ PDV +Y +++NGL K+      +  F  + E+G   N+
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503

Query: 171 VCYNILID-----------------------------------GFFKKGDYMRAKEIWER 195
           + YNILI+                                   GF   GD   A +++ R
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +  +   V TYN+MIN   +    D   +++  M     + DS+TY   I G CK G
Sbjct: 564 MEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           NV        + +E G      T+  +I+  C   ++ E   +  +M R G +
Sbjct: 624 NVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 179/645 (27%), Positives = 322/645 (49%), Gaps = 33/645 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   +  T++ LF     + GY HS  ++  ++ +L        + R+L 
Sbjct: 70  ITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLM 129

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRK 113
            ++ +     E + +S+++ Y K   P +   +   M  ++ CE           IL   
Sbjct: 130 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 189

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              + A      +  + + P ++++G V+  L    ++  AL+V  +M + G   N V Y
Sbjct: 190 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIY 249

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    K      A ++ E + +   V P+  T+N +I GLCK  R +E  +M +RM 
Sbjct: 250 QTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRML 308

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D  TY   ++GLCK G V+ A+ ++  + +      +V +N +I GF   G++ 
Sbjct: 309 IRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----TSVIFNTLIHGFVTHGRLD 364

Query: 294 ECFE-LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +    L +++   G + +V +YN LI G  + G V  A+ +   +R K C  +  ++ +L
Sbjct: 365 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ++G CK G +++A  +LNE+   G                 E R+ +A  +   M + GC
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K + YT NSL++G  +  ++++A++L ++M  +G     V+YNTLIN   +     EA  
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 544

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V EM+ +G   D ITY+ LI GLC++ ++D A  L  + L+ G  P     NILI+GLC
Sbjct: 545 LVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLC 604

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            +G VE+A++    M  R   P++VT+N+L++GL + G  +  L ++  +  E + PD +
Sbjct: 605 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +YN  +  LC    + DA   L++ +  G +P   TW IL+++++
Sbjct: 665 TYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 264/548 (48%), Gaps = 54/548 (9%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNS-MPDKAL-- 93
           + ++F+ +L R I P L      +  L  + +     D ALSV++   K+  +P+  +  
Sbjct: 195 AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV----DSALSVLRDMTKHGCVPNSVIYQ 250

Query: 94  -------------DVFQRMNEIF--GCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
                        +  Q + E+F  GC             LC+  +  +A + +N +  +
Sbjct: 251 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 310

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD  +YG ++NGL K G +  A     ++F R  +   V +N LI GF   G    A
Sbjct: 311 GFTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA 366

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K +   +V    + P+V TYN +I G  K G     LE+   M+    + + ++Y   + 
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G CK G ++ A  +  EM   G+  + V +N +I  FC+  +I E  E++  M RKGC  
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V ++N LI GL E  ++  A+  W LLR      D  + GV+ N +  N  +N  ++  
Sbjct: 487 DVYTFNSLISGLCEVDEIKHAL--W-LLR------DMISEGVVANTVTYNTLINAFLR-- 535

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G + +A  LVN M   G  L+  T NSL+ G  +A +++ A  LF++M R G
Sbjct: 536 -------RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P+ +S N LINGLC+     EA  F KEM+ +G  PD++T++ LINGLC++ +I+  L
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  +   +G  PD   YN L+  LC  G V DA  L     +   VPN  T++ L+  L
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708

Query: 549 FKTGDCDK 556
                 D+
Sbjct: 709 VPQETLDR 716


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 296/591 (50%), Gaps = 48/591 (8%)

Query: 47  RLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           R+  P LV+ + + +E  +I+          KC+C        +  +GK +      DV 
Sbjct: 93  RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVV 152

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                + G     LC   +  +A      L+ +  +PDV ++ T++NGL + G ++ A+A
Sbjct: 153 TFTTLLHG-----LCLDHRVSEAL----DLFHQICRPDVLTFTTLMNGLCREGRVVEAVA 203

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + D M E G++ + + Y   +DG  K GD + A  +  ++   + + PNVV Y+ +I+GL
Sbjct: 204 LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK GR  +   ++  M+      +  TY   I G C +G    A+R+ +EM+E  I  + 
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTYNA+I+ F + GK  E  EL++ M  +G + N ++YN +I G  +  ++D A  ++ L
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           +  K C+ D  T   LI+G C    ++  +++L+E+   G                  G 
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK----------- 427
           L  A  L  +M   G   +  TCN+L++G     KL++A+ +FK M +            
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V++YN LI GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++D A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            ++      K F+P+V  +N LI+G C AG+V+D L+L+  M +R  V + + Y TL+ G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
             K G+ + AL+I+  ++   + PD I+    L G  S   +  A   L D
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 165/561 (29%), Positives = 283/561 (50%), Gaps = 50/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      L + GL PDV ++ T
Sbjct: 97  PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTT 156

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F ++       +V+ +  L++G  ++G  + A  + +R+V E 
Sbjct: 157 LLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV-EN 211

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLCKAGNVEG 259
            + P+ +TY   ++G+CK G     L +  +M++    K +   Y + I GLCK G    
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           +  ++ EM + GIF + VTYN MI GFC +G+      L  E++ RK   NVV+YN LI 
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK------------------QDR 373

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  + +T  +L++G+  A ++++ + L  EM R+G     V+YNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G C V     A    ++M+  G  PD++T + L++GLC + K+  AL++  + +QK 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF-KAMQKS 492

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A +++  +  +   P+++++N  + G C   R+ D  E   +   RGI+ 
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612

Query: 607 TTITWHILV---RAVMN-NGA 623
             I +  L+   R V N NGA
Sbjct: 613 DAIIYITLIYGFRKVGNINGA 633



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 257/513 (50%), Gaps = 35/513 (6%)

Query: 91  KALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           +ALD+F ++       F      LCR+ +  +A   L+ + E GL+PD  +YGT ++G+ 
Sbjct: 169 EALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 147 KSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           K GD + AL +  +M E   ++ NVV Y+ +IDG  K G +  +  ++  +  +  ++PN
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-QDKGIFPN 287

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           +VTYN MI G C  GR+     +   M + +   +  TY + I+   K G    A  +Y 
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           EM+  GI  + +TYN+MIDGFC+  ++    +++ +M  KGC  +V ++  LI G     
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
           ++D+ + +   +  +   A++ T+  LI+G C  G LN A+ +  ++   G         
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 376 --------EGRLADAASLVNRMDK-----------HGCKLNAYTCNSLMNGFIQASKLEN 416
                    G+L DA  +   M K           +G + +  T N L+ G I   K   
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L++EM  +G  P  ++Y+++I+GLCK  R  EA      M  K + P+++T++ LIN
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C++ ++D  L+L C+  ++G   D  +Y  LI+G    G +  AL ++  M      P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + +T   ++ G +   + ++A+ +   +   +L
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 227/455 (49%), Gaps = 32/455 (7%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++ +   P+V+ +N ++  + +  R D  + ++ +M++ +   D +++   I   C    
Sbjct: 72  MLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 131

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           +  A   + ++ + G+  D VT+  ++ G C   ++ E  +L+  + R    +V+++  L
Sbjct: 132 LPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP---DVLTFTTL 188

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + GL   G+V EA+++ + + E     D  T+G  ++G+CK G    A+ +L ++EE   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            +GR +D+ +L   M   G   N  T N ++ GF  + +   A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L +EM  +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITY+ +I+G 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  ++D A  +      KG +PDV  +  LI G C A +++D ++L   M +R  V N 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN- 597
           VTYNTL+ G    GD + AL++   ++   + PDI++ N  L GLC   ++ DA E    
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 598 --------DA--LCRGILPTTITWHILVRAVMNNG 622
                   DA     G+ P  +T++IL+  ++N G
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 7/194 (3%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G  +   LE+AI LF +M R    P+V+ +N L+  + ++ER     S  ++M  K 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +  L+HGLC   +V +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  +    C P+++T+ TLM+GL + G   +A+ + + ++E  L+PD I+Y   + G+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 584 CSCSRMSDAFEFLN 597
           C   +M D    LN
Sbjct: 228 C---KMGDTVSALN 238



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 54/100 (54%)

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +EDA+ L+S+M +   +P+++ +N LM  + +    D  + ++  +  +++R DI S+ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +K  CSCS++  A          G+ P  +T+  L+  +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGL 161



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           L +G  + K ++ A+ L    L+    P V  +N L+  +    + +  + LY  M+++ 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              ++ ++  L+           AL  +  + +  L PD++++   L GLC   R+S+A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  +  +CR   P  +T+  L+  +   G
Sbjct: 172 DLFHQ-ICR---PDVLTFTTLMNGLCREG 196


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 181/666 (27%), Positives = 330/666 (49%), Gaps = 60/666 (9%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           +K+ H A   F  A ++ GY+H+   +  +++RL   +    V +IL  +  +       
Sbjct: 159 QKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMH 218

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQFEKAKRFLNS 125
           +  S+++ +G  +    AL++F +M   FGC            +L +   +  A      
Sbjct: 219 LLTSLLRTFGSTNNVSGALEIFNQMKS-FGCNPSTNMYNFVLELLVKGGFYHSAVIVFGK 277

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L +  ++PD  ++   ++   +SG L  A     EM + G++  V  + +LID   K G+
Sbjct: 278 LGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGN 337

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A + +  +       PNVVTY  ++NGL K GR +E  E++  MK+N    D+  Y 
Sbjct: 338 IDEACKFFNGM-KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYN 396

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I GL KAG  + A  +++EM + G+  +  TYN MI    +AG+  E ++L+  +  +
Sbjct: 397 TLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC-----------------NADST- 346
           G + +V +YN LI  L + G++D+ ++I + + EK                    AD T 
Sbjct: 457 GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTV 516

Query: 347 -------------THGVLINGLCKNGYLNKAIQILNEVEE-----------------GGE 376
                        T+  L++    NG++++A+++L  +++                 G  
Sbjct: 517 EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKA 576

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GRL +A SL+  M+K GC+ +  T +SLM  F +  + E ++ LF EM RKGC   V +Y
Sbjct: 577 GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + +IN LCK +   +A      M E+G +P +  Y  L++ L + +KID AL++  +  +
Sbjct: 637 SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
               PD  +YNI+++GL  + +V++A +L  +MK +N +P+L TY +L+DGL K+G  ++
Sbjct: 697 SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  ++  + EE   PD+++Y   +  L    ++S A         +  +P  +T+  L+ 
Sbjct: 757 AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 617 AVMNNG 622
           ++   G
Sbjct: 817 SLGKEG 822



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 176/686 (25%), Positives = 334/686 (48%), Gaps = 75/686 (10%)

Query: 4   SAKRLLNLLKAEKNP--HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI- 60
           +A+ +  ++K+  +P  HT   L D+  +      +   F+ +      P +V + + + 
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN 365

Query: 61  -------LE-----LIEIQKCYC-PEDVAL-SVIQAYGKNSMPDKALDVFQRMNE----- 101
                  LE      +E+++  C P+ +A  ++I   GK    D A  +F+ M +     
Sbjct: 366 GLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVP 425

Query: 102 ---IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
               +     +L +  +  +A +  + L E+G  PDV++Y T+I+ L K G +   LA+ 
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485

Query: 159 DEMFERGVETNV-------------------------------VCYNILIDGFFKKGDYM 187
            EM E+G E  +                               + YN L+  F   G   
Sbjct: 486 KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ E ++ +    P VVTY  +++GL K GR DE + +   M+K   E    TY S 
Sbjct: 546 EAVKLLE-VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +    K    E +  ++ EMV  G   D  TY+ +I+  C++  + +  +++  M  +G 
Sbjct: 605 MASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664

Query: 308 LNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ +Y  L+  L+++ K+D A+ I+  L+E +   D+  + +++NGL K+  +++A +
Sbjct: 665 EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724

Query: 367 ILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +++ ++                  G  GRL +A ++  +M + G + +     SLM+   
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  KL +A+ +F+ M++K C P VV+Y++LI+ L K  R  EAY F +  + KG  P++ 
Sbjct: 785 KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG 844

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            YS LI+   +   +D AL+L  +  ++   P++  YN L+ GL  AG++  A +L   M
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +K  CVP+LVTYN L+DG+ K G  D+A   +  + E+ + PD+I++   ++ L    ++
Sbjct: 905 EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +A E  +     G  P+ +T+++L+
Sbjct: 965 LEACELFDSMEEEGYNPSVVTYNVLI 990



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 297/639 (46%), Gaps = 101/639 (15%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG 130
           + ++ ++   D A +  Q M +  G + G+         L +    ++A +F N +    
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIK-SGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             P+V +Y T++NGL K+G L  A  VF EM E     + + YN LIDG  K G+   A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +++ +  +  + PN+ TYN+MI+ L K GR  E  +++  +K+     D FTY + I  
Sbjct: 413 GLFKEM-KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471

Query: 251 LCKAGN-------------------------------VEGAERVYREMVESGIFVDAVTY 279
           L K G                                +EGA+R           +  +TY
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N ++  F   G + E  +L EVM +  C+  VV+Y  L+ GL + G++DEA+S   LLRE
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVS---LLRE 588

Query: 339 --------------------------------------KNCNADSTTHGVLINGLCKNGY 360
                                                 K C AD +T+ ++IN LCK+  
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 361 LNKAIQILNEV-EEGGEGRLAD----------------AASLVNRMDKHGCKLNAYTCNS 403
           +++A+ +   + EEG E  L +                A  + N + +     + +  N 
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++NG +++++++ A  L   M  +   P + +Y +L++GL K  R  EA++   +M E+G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            +PD++ Y+ L++ L +  K+  AL +     +K   PDV  Y+ LI  L   G+VE+A 
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             + N   + C PN+  Y++L+D   K G  D+ALE++  +   +  P+I++YN  L GL
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               R++ A + L +    G +P  +T++IL+  V   G
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMG 927


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 296/591 (50%), Gaps = 48/591 (8%)

Query: 47  RLIDPKLVVHVSRILELIEIQ----------KCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           R+  P LV+ + + +E  +I+          KC+C        +  +GK +      DV 
Sbjct: 93  RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVV 152

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                + G     LC   +  +A      L+ +  +PDV ++ T++NGL + G ++ A+A
Sbjct: 153 TFTTLLHG-----LCLDHRVSEAL----DLFHQICRPDVLTFTTLMNGLCREGRVVEAVA 203

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + D M E G++ + + Y   +DG  K GD + A  +  ++   + + PNVV Y+ +I+GL
Sbjct: 204 LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK GR  +   ++  M+      +  TY   I G C +G    A+R+ +EM+E  I  + 
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTYNA+I+ F + GK  E  EL++ M  +G + N ++YN +I G  +  ++D A  ++ L
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           +  K C+ D  T   LI+G C    ++  +++L+E+   G                  G 
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK----------- 427
           L  A  L  +M   G   +  TCN+L++G     KL++A+ +FK M +            
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V++YN LI GL    +F EA    +EM  +G  PD ITYS +I+GLC+  ++D A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            ++      K F+P+V  +N LI+G C AG+V+D L+L+  M +R  V + + Y TL+ G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
             K G+ + AL+I+  ++   + PD I+    L G  S   +  A   L D
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 165/561 (29%), Positives = 283/561 (50%), Gaps = 50/561 (8%)

Query: 89  PDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           PD  + ++Q+M       +I+     I   C   +   A      L + GL PDV ++ T
Sbjct: 97  PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTT 156

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +++GL     +  AL +F ++       +V+ +  L++G  ++G  + A  + +R+V E 
Sbjct: 157 LLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV-EN 211

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLCKAGNVEG 259
            + P+ +TY   ++G+CK G     L +  +M++    K +   Y + I GLCK G    
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           +  ++ EM + GIF + VTYN MI GFC +G+      L  E++ RK   NVV+YN LI 
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ GK  EA  +++ +  +    ++ T+  +I+G CK                  + R
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK------------------QDR 373

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +   M   GC  + +T  +L++G+  A ++++ + L  EM R+G     V+YNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK- 497
           LI+G C V     A    ++M+  G  PD++T + L++GLC + K+  AL++  + +QK 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF-KAMQKS 492

Query: 498 -----------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                      G  PDV  YNILI GL + GK  +A +LY  M  R  VP+ +TY++++D
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A +++  +  +   P+++++N  + G C   R+ D  E   +   RGI+ 
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612

Query: 607 TTITWHILV---RAVMN-NGA 623
             I +  L+   R V N NGA
Sbjct: 613 DAIIYITLIYGFRKVGNINGA 633



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 227/455 (49%), Gaps = 32/455 (7%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++ +   P+V+ +N ++  + +  R D  + ++ +M++ +   D +++   I   C    
Sbjct: 72  MLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 131

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           +  A   + ++ + G+  D VT+  ++ G C   ++ E  +L+  + R    +V+++  L
Sbjct: 132 LPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP---DVLTFTTL 188

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + GL   G+V EA+++ + + E     D  T+G  ++G+CK G    A+ +L ++EE   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            +GR +D+ +L   M   G   N  T N ++ GF  + +   A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L +EM  +  SP VV+YN LIN   K  +F EA     EML +G  P+ ITY+ +I+G 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  ++D A  +      KG +PDV  +  LI G C A +++D ++L   M +R  V N 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN- 597
           VTYNTL+ G    GD + AL++   ++   + PDI++ N  L GLC   ++ DA E    
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 598 --------DA--LCRGILPTTITWHILVRAVMNNG 622
                   DA     G+ P  +T++IL+  ++N G
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 70/509 (13%)

Query: 91  KALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           +ALD+F ++       F      LCR+ +  +A   L+ + E GL+PD  +YGT ++G+ 
Sbjct: 169 EALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 147 KSGDLLGAL--------------------AVFD----------------EMFERGVETNV 170
           K GD + AL                    A+ D                EM ++G+  N+
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN +I GF   G +  A+ + + + +E  + PNVVTYN +IN   K G+F E  E++D
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ TY S I G CK   ++ AE ++  M   G   D  T+  +IDG+C A 
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I +  EL   M R+G + N V+YN LI G    G ++ A+ + + +       D  T  
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 350 VLINGLCKNGYLNKAIQILNEVEEG----------------------------GEGRLAD 381
            L++GLC NG L  A+++   +++                              EG+  +
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L   M   G   +  T +S+++G  + S+L+ A  +F  M  K  SP VV++NTLIN
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK  R  +      EM  +G   D I Y  LI G  +   I+ AL +  + +  G  P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           D      ++ G  S  ++E A+ +  +++
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 7/194 (3%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G  +   LE+AI LF +M R    P+V+ +N L+  + ++ER     S  ++M  K 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + D+ ++++LI   C   K+  AL    +  + G  PDV  +  L+HGLC   +V +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  +    C P+++T+ TLM+GL + G   +A+ + + ++E  L+PD I+Y   + G+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 584 CSCSRMSDAFEFLN 597
           C   +M D    LN
Sbjct: 228 C---KMGDTVSALN 238



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 54/100 (54%)

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +EDA+ L+S+M +   +P+++ +N LM  + +    D  + ++  +  +++R DI S+ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +K  CSCS++  A          G+ P  +T+  L+  +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGL 161



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 8/129 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I    K S  D+A  +F  M           F       C+  + +        +  +
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  D   Y T+I G  K G++ GAL +F EM   GV  + +    ++ GF+ K +  RA
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 190 KEIWERLVM 198
             + E L M
Sbjct: 669 VAMLEDLQM 677



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           L +G  + K ++ A+ L    L+    P V  +N L+  +    + +  + LY  M+++ 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              ++ ++  L+           AL  +  + +  L PD++++   L GLC   R+S+A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  +  +CR   P  +T+  L+  +   G
Sbjct: 172 DLFHQ-ICR---PDVLTFTTLMNGLCREG 196


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 305/648 (47%), Gaps = 33/648 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+NLL AEKN     A+ +   +  G A +   F+ ++R     +         E+++ +
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLK-AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRK 183

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEK 118
           +C       L ++    K  M +KA +VF  M           +       L + ++ ++
Sbjct: 184 RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKE 243

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     + + G  PD  +Y T+I+GL K+G    AL V D M  +      V Y IL++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G   RA+E++ R++  +   PN V Y  +I+G  K GR  E   ++D M +    
Sbjct: 304 SLCKAGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYR 362

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  T+   I GLCK+GN E A + + EM+  G   + VTY  +I G  + G++   F +
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI 422

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   GC  + V+Y  L+ G  + G++DEA  + + L + + + +   +  L+NGLC 
Sbjct: 423 MKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCD 482

Query: 358 NGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNAY 399
            G + K +  L E  +                     GRL +A  +  RM   GCK +A 
Sbjct: 483 GGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542

Query: 400 TCNSLMNGFIQA--SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           T N L+NG  ++  +++E A  L  ++ + G  P  V+Y  L  GLCK+     A   ++
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           E   +GW  D++ Y+ L  GLC   ++D A+ L  + +++G  PD   Y  +I+GL    
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVK 662

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISY 576
           K+EDA + +  M  +   P + TY  L+  L   G+ D+A   +  +L    L   ++ Y
Sbjct: 663 KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIY 722

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +  + G C   ++  A +   D + RG +PT +T   L   ++ +G +
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/649 (25%), Positives = 298/649 (45%), Gaps = 69/649 (10%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMP 89
           R  G + S H   ++L  +    L  HV+ +L  +++         A+S  +  G+ +  
Sbjct: 62  RLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVT------GTAISFFRWAGEQAG- 114

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
                 FQ     + C   +L  ++ + +       + + G+ P+ +S+  +I    ++ 
Sbjct: 115 ------FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
               A+  F+ M  +  + ++  + IL+D   K G   +A E++  ++    V P+   +
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             M+  L K  R  E  E++ +M+K     D+  Y + I GL KAG+ + A +V   M+ 
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
                  VTY  +++  C+AG ++   EL+ VM   G   N V Y  LI G  ++G++ E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A S+++ + E     D  TH V+I+GLCK+G   +A +   E+  GG             
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR+A+A  ++  M  HGC  ++ T   L++GF +  +L+ A  L  E+ +   SP
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 432 TVVSYNTLIN------------------------------------GLCKVERFGEAYSF 455
            +  Y++L+N                                    GLCK  R  EA   
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRI 528

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSK--KIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            + M+ +G KPD  TY++LINGLC+S+  +++ A  L     + G+ PD   Y  L  GL
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL 588

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G+V+ A+++      R    ++V Y  L  GL   G  D+A+ ++  ++ +   PD 
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +Y   + GL    ++ DA +F ++ + +G  PT  T+  LV+A+ + G
Sbjct: 649 AAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 200/482 (41%), Gaps = 103/482 (21%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  + K+    +A  +F  M E  G    +         LC+   FE+A +    +  
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEA-GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G KP+V +Y T+I GL K G +  A  +   M   G   + V Y  L+DGF K G    
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE-MWDRMKKNEREKDSFTYCSF 247
           A ++ + L  + S  PN+  Y+ ++NGLC  G  ++ L+ ++++ K      D    CS 
Sbjct: 454 AAQLLDELD-KCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA--GKIKECFELWEVMGRK 305
           I GLCK G ++ A R+++ MV  G   DA TYN +I+G CR+   +++  F L   + + 
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572

Query: 306 GCL------------------------------------NVVSYNILIRGLLENGKVDEA 329
           G L                                    +VV+Y  L  GL   G+VD A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRLADAASLVNR 388
           +S+++ +  +    D+  +  +INGL K   L  A +  +E + +G +  +A   +LV  
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 389 MDKHG--------------------------------CKL-------------------- 396
           +   G                                CK                     
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A T  SL +G +++ K E A  L +EM+  G  P   ++  +++GL K +  G+    V
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 457 KE 458
           +E
Sbjct: 813 QE 814


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 178/645 (27%), Positives = 321/645 (49%), Gaps = 33/645 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   N  T++ LF     + GY HS  ++  ++ +L        + R+L 
Sbjct: 76  ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRK 113
            ++ +     E + +S+++ Y K   P +   +   M  ++ CE           IL   
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              + A      +  + + P ++++G V+       ++  AL++  +M + G   N V Y
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    K      A ++ E + +   V P+  T+N +I GLCK  R +E  +M +RM 
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D  TY   ++GLCK G V+ A+ ++  + +  I    V +N +I GF   G++ 
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLD 370

Query: 294 ECFE-LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +    L +++   G + +V +YN LI G  + G V  A+ +   +R K C  +  ++ +L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ++G CK G +++A  +LNE+   G                 E R+ +A  +   M + GC
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K + YT NSL++G  +  ++++A++L ++M  +G     V+YNTLIN   +     EA  
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V EM+ +G   D ITY+ LI GLC++ ++D A  L  + L+ G  P     NILI+GLC
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            +G VE+A++    M  R   P++VT+N+L++GL + G  +  L ++  +  E + PD +
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++N  +  LC    + DA   L++ +  G +P   TW IL+++++
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 165/545 (30%), Positives = 268/545 (49%), Gaps = 48/545 (8%)

Query: 37  SPHLFHHILRRLIDPKL------------VVHVSRILELI-EIQKCYC-PEDVAL-SVIQ 81
           + ++F+ +L R I P L            V  +   L L+ ++ K  C P  V   ++I 
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLK 132
           +  K +  ++AL + + M  + GC             LC+  +  +A + +N +  +G  
Sbjct: 261 SLSKCNRVNEALQLLEEMF-LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD  +YG ++NGL K G +  A     ++F R  +  +V +N LI GF   G    AK +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              +V    + P+V TYN +I G  K G     LE+   M+    + + ++Y   + G C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K G ++ A  V  EM   G+  + V +N +I  FC+  +I E  E++  M RKGC  +V 
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++N LI GL E  ++  A+  W LLR      D  + GV+ N +  N  +N  ++     
Sbjct: 496 TFNSLISGLCEVDEIKHAL--W-LLR------DMISEGVVANTVTYNTLINAFLR----- 541

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                G + +A  LVN M   G  L+  T NSL+ G  +A +++ A  LF++M R G +P
Sbjct: 542 ----RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           + +S N LINGLC+     EA  F KEM+ +G  PD++T++ LINGLC++ +I+  L + 
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G  PD   +N L+  LC  G V DA  L     +   VPN  T++ L+  +   
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717

Query: 552 GDCDK 556
              D+
Sbjct: 718 ETLDR 722


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 275/515 (53%), Gaps = 24/515 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + +KA   L+ + ++G+ PD  ++ ++++GL K+G    A ++   M ER    +
Sbjct: 20  LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI G  K+ +  RAK + +  V  +   P+VVTY+++ +GLCK GR DE  E+ 
Sbjct: 80  CCTYNTLISGLCKQQNVDRAKTLVDEFV-SSGFVPDVVTYSILADGLCKRGRIDEAFELV 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  N    +  TY + I GLCKA   E A  +   +V SG   D VTY  ++DG C+ 
Sbjct: 139 KEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKE 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  ++ E M ++GC  +V++Y  L+ GL   G+VDEA  I++ +  K+C AD+  +
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 258

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+NG CK+    +A ++++ +                   +    ++ Y  N+LM+G+
Sbjct: 259 VSLVNGYCKSSRTKEAQKVVDGI-------------------RGTPYIDVY--NALMDGY 297

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L+    +F++M+ +GC P + +YN +++GLCK  +  EA+ F++ M   G  PD+
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ++Y+++I+GL ++ K   A ++  Q +Q G  PD   YN L+   C   + +DA+ +  N
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCS 587
           M K    P+ VTYNTL+ GL +T     A E+ + +L    +     +YN  +  LC   
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 477

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +  A   ++     G+   T+T++I +  +   G
Sbjct: 478 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 243/459 (52%), Gaps = 23/459 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M ER V  +V  YNILIDG  K     +A E+   +V +  V P+ VT+N +++GLCK G
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           +F+    +   M +        TY + I GLCK  NV+ A+ +  E V SG   D VTY+
Sbjct: 60  KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS 119

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            + DG C+ G+I E FEL + M   GC  N+V+YN LI GL +  K ++A  + E L   
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D  T+ ++++GLCK G L+KA++                  +V  M K GC  +  
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALK------------------MVEGMLKRGCTPSVI 221

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  +LM G  +  +++ A  +FKEM  K C+   ++Y +L+NG CK  R  EA   V  +
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             +G  P +  Y+ L++G C+  ++D    +      +G  P++  YNI++ GLC  GKV
Sbjct: 282 --RGT-PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A     +M    CVP++V+YN ++DGLFK     +A ++ + +++  + PD ++YN  
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +   C   R  DA   L + +  G+ P  +T++ L+  +
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 284/566 (50%), Gaps = 58/566 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+++  ++AK  ++     G  PDV +Y  + +GL K G +  A  +  EM   G   N
Sbjct: 90  LCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPN 149

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN LIDG  K     +A E+ E LV  +   P+VVTY ++++GLCK GR D+ L+M 
Sbjct: 150 LVTYNTLIDGLCKASKTEKAYELLETLV-SSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY---------- 279
           + M K        TY + + GLC+ G V+ A  +++EMV      DA+ Y          
Sbjct: 209 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 268

Query: 280 ----------------------NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
                                 NA++DG+C+ G++ E   ++E M  +GC+ N+ +YNI+
Sbjct: 269 SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 328

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + GL ++GKVDEA    E +    C  D  ++ ++I+GL K     +A Q+L+++ + G 
Sbjct: 329 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 388

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           E R  DA  ++  M K G   +  T N+L++G  Q ++L +A  
Sbjct: 389 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 448

Query: 420 LFKEMSRKGCSPTV-VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           L  EM R GC  +   +YNT+I+ LCK     +A   +  M   G + + +TY++ I+ L
Sbjct: 449 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 508

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK--KRNCVP 536
           C+  ++D A  L     +     D   Y  +I GLC A +++ A +L   M   K  C+ 
Sbjct: 509 CKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 565

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  T+N L+D   KT   D+AL +   +++    P +I+YN+ +  LC   ++  A+E  
Sbjct: 566 SH-TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           ++   RGI+ +++++ +L+  +   G
Sbjct: 625 DEMAVRGIVASSVSYTVLIYGLCGQG 650



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 194/357 (54%), Gaps = 22/357 (6%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGK 325
           M E  +  D  TYN +IDG C+A K  +  E L E++ R    + V++N ++ GL + GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            + A S+  ++ E+NC     T+  LI+GLCK   +++A                   +L
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA------------------KTL 102

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V+     G   +  T + L +G  +  +++ A  L KEMS  GC+P +V+YNTLI+GLCK
Sbjct: 103 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  +AY  ++ ++  G+ PD++TY+++++GLC+  ++D ALK+    L++G TP V  
Sbjct: 163 ASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 222

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  L+ GLC  G+V++A  ++  M  ++C  + + Y +L++G  K+    +A ++ + I 
Sbjct: 223 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI- 281

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             R  P I  YN  + G C   R+ +      D  CRG +P   T++I++  +  +G
Sbjct: 282 --RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 336



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 256/505 (50%), Gaps = 40/505 (7%)

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           EL+E  +   + P+ V  ++I     K    DKAL + + M +  GC   +         
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALMEG 229

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A      +  K    D  +Y +++NG  KS     A  V D +  RG    
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPY- 286

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN L+DG+ K+G       ++E +     V PN+ TYN++++GLCK G+ DE     
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV-PNIKTYNIVMDGLCKHGKVDEAFPFL 345

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       D  +Y   I GL KA   + A +V  +M+++GI  DAVTYN ++  FC+ 
Sbjct: 346 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 405

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTT 347
            +  +   + + M + G   + V+YN LI GL +  ++ +A  +  E+LR     +  TT
Sbjct: 406 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 465

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  +I+ LCK G L +A+ +++ +   G                 EGRL +A+SL++ MD
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERF 449
               ++ +YT  +++ G  +A +L+ A  L +EM + KG   T  ++N LI+   K +R 
Sbjct: 526 TLRDEV-SYT--TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 582

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA + ++ M+++G  P +ITY+++I  LC+  K+D A +L  +   +G       Y +L
Sbjct: 583 DEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNC 534
           I+GLC  G+ ++ALQ+   M   +C
Sbjct: 643 IYGLCGQGRGKEALQVLEEMASSDC 667



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 234/467 (50%), Gaps = 36/467 (7%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMN-----EIFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           +S++  Y K+S   +A  V   +      +++       C++ + ++       +  +G 
Sbjct: 259 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 318

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            P++ +Y  V++GL K G +  A    + M   G   +VV YNI+IDG FK      A++
Sbjct: 319 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 378

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + ++++ +  + P+ VTYN ++   CK  RFD+ + +   M K   + D+ TY + I GL
Sbjct: 379 VLDQMI-QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437

Query: 252 CKAGNVEGAERVYREMVESGIFVDA-VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            +   +  A  +  EM+ +G  V A  TYN +ID  C+ G +K+   L + M   G   N
Sbjct: 438 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 497

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YNI I  L + G++DEA S   LL E +   D  ++  +I GLCK   L++A ++  
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASS---LLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAR 554

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E+                 +   G  + ++T N L++ F +  +L+ A+ L + M ++GC
Sbjct: 555 EM-----------------VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGC 597

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP+V++YN +I  LCK+++  +A+    EM  +G     ++Y++LI GLC   +   AL 
Sbjct: 598 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL- 656

Query: 490 LCCQFLQKGFTPDVTMYNI----LIHGLCSAGKVEDALQLYSNMKKR 532
              Q L++  + D  + ++    L   L   G+ E+A +L   M  +
Sbjct: 657 ---QVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 189/617 (30%), Positives = 315/617 (51%), Gaps = 33/617 (5%)

Query: 37  SPHL--FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKAL 93
           SP++  ++ +L  L           + E ++  K + P+ V+ S +I + G+    + AL
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAK-WTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 94  DVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           +V   M +  GC+  +         L +  QF++A R L  + + G  PDV +Y  +I+ 
Sbjct: 65  EVVAEM-QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
           L K+G L  A  +F EM ERG   +   YN LI G  K G   +A E+ E +       P
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH-GCPP 182

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V+TY+ +I GL K G   +  +++  MK+  R+ DS T+ + +  L KAG V+ A  + 
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
            EM E G+    VTYNA+I GF + G + E + L + M R GC  +VV+Y+ LI GL++ 
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
            ++DEA  + + + ++ C  D+ T+  LINGL K G LN A ++ + ++  G        
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      R+  A  L   M+  G + + +T  S++    +A ++++A  LF EM  
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG SP V++YN  +N L +  RF EA    ++M E G  PD+ TY  L+ GL ++K++D 
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDD 482

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L  + +++G   D   ++  +  L S G V++A +L      +   P   +YN L+D
Sbjct: 483 ACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALID 542

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L K G   +A      + E+  +PDI+SY+  +  L    ++  AFE L +   RG+  
Sbjct: 543 ALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKL 602

Query: 607 TTITWHILVRAVMNNGA 623
           +  ++  LVR + + GA
Sbjct: 603 SPRSYSNLVRKLQDWGA 619



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 90/159 (56%)

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+++TY+ L+N L ++ + + A  L  +     +TPDV  Y+ LI+ L  AGK E AL++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            + M+ + C PNL TYNTL+D L K G  D+AL +   + +    PD+ +YN  +  L  
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             R+S+AF    +   RG +P T T++ L+  +   G S
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/508 (32%), Positives = 278/508 (54%), Gaps = 26/508 (5%)

Query: 112 RKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           R  + + A +F +   E+ G K DV+SY  +++ LVKSG       V+ ++   G   N+
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V + ILI G  K G  MRA E   R + E SV P+V  +NV+I+GL K G  D+ +++++
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFL-RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG--IFVDAVTYNAMIDGFCR 288
            M+ +  + +  TY + I GLCK+GN+E A  +  EM+  G     D VTYN +I+ F R
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A +I+E     E M   G   +V++ NIL+ G+ ++G V+EA+ I + ++      D  T
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  +I+ LC  G + +A +IL  +                      C  +  T N+L++G
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTMS---------------------CSPDLVTFNTLLDG 280

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +A  L  A+ + +EM R+   P V++Y  L+NGLC+V +   A+  ++E++ +G+ PD
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +I Y+ L++GLC+S +I+ A KL  +   +G    V MY+ L+ G C AG V  A ++ +
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M   N VP L TYN ++ GL K G   KA+ + + ++     PD+++YN  + GLC  +
Sbjct: 401 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 460

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A +  ++   RG  P  +T   +V
Sbjct: 461 RVREACDLADEMASRGCFPNDVTLGSVV 488



 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 179/622 (28%), Positives = 309/622 (49%), Gaps = 35/622 (5%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           ++    P  A+  FD A  + GY H  H ++H+L  L+         ++ + +    C  
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGC-S 59

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P  V   + I+   K     +AL+  + ++E        IF      L +    ++A + 
Sbjct: 60  PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET--NVVCYNILIDGF 180
             ++    +KP++ +Y TVI+GL KSG+L  A  + +EM  +G ++  ++V YN LI+ F
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           ++      A    E++     + P+V+T N++++G+CK G  +E LE+ D MK      D
Sbjct: 180 YRASRIREACAFREKM-KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPD 238

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY S IH LC AG V  A  + + M  S    D VT+N ++DGFC+AG +    E+ E
Sbjct: 239 VITYNSIIHALCVAGKVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLE 295

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M R+  L +V++Y IL+ GL   G+V  A  + E +  +    D   +  L++GLCK+G
Sbjct: 296 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                     E+EE        A  LV  M   GC+      +SL++G+ +A  +  A  
Sbjct: 356 ----------EIEE--------AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +  EM      P + +YN ++ GL K     +A S + +++ +G+ PD++TY+ LI+GLC
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ ++  A  L  +   +G  P+      ++ GLC  G+V+DA  L   M ++   PN+V
Sbjct: 458 KANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 517

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            Y +L+DGL K+   D A  + + +  + +  D  +Y   +  +    R+++A    ++ 
Sbjct: 518 VYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEM 577

Query: 600 LCRGILPTTITWHILVRAVMNN 621
           + RG LP   T   L  A M+N
Sbjct: 578 VARGFLPDGSTSKTLEEAAMSN 599



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 220/427 (51%), Gaps = 24/427 (5%)

Query: 218 KCGRFDECLEMWDRMKKNEREK-DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           +  R D  ++ +D   + +  K D  +Y   +  L K+G+     +VY++++ SG   + 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VT+  +I G C+AG+     E    +       +V  +N+LI GL ++G  D+A+ ++E 
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEG----------------- 377
           +       +  T+  +I+GLCK+G L KA ++L E + +GG+                  
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 378 -RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            R+ +A +   +M   G   +  TCN L++G  +   +E A+ +   M   G  P V++Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N++I+ LC   +  EA   +K M      PD++T++ L++G C++  +  AL++  +  +
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +   PDV  Y IL++GLC  G+V+ A  L   + ++  +P+++ Y +L+DGL K+G+ ++
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A ++   +     R  ++ Y+  + G C    +  A E L + +   ++P   T++I++ 
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 617 AVMNNGA 623
            ++ +G+
Sbjct: 420 GLIKDGS 426


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 269/513 (52%), Gaps = 25/513 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  +FL  +  +G  PD+ +  ++I GL K+G    A  V + + + G   +
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN+LI G+ K G+   A ++ +R+    SV P+VVTYN ++  LC  G+  E +E+ 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM----SVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  + E   D  TY   I   CK   V  A ++  EM + G   D VTYN +I+G C+ 
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK-VDEAISIWELLREKNCNADSTT 347
           G++ E       M   GC  NV+++NI++R +   G+ +D    + E++R K C+    T
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR-KGCSPSVVT 354

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +LIN LC+ G + +AI +L                   +M +HGC  N+ + N L++ 
Sbjct: 355 FNILINFLCRKGLIGRAIDVLE------------------KMPQHGCTPNSLSYNPLLHA 396

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  K+E AI     M  +GC P +V+YNTL+  LCK  +   A   + ++  KG  P 
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +ITY+ +I+GL +  K D A+KL  +   KG  PD+  Y+ L+ GL   GKV++A+  + 
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           ++++    PN +TYN++M GL K     +A++   +++    +P   SY I ++GL    
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +A E LN+   RG++  +    ++V+   N
Sbjct: 577 LAKEALELLNELCSRGVVKKSSAEQVVVKIPFN 609



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 235/437 (53%), Gaps = 21/437 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+++    +I GLCK G+  +   + + ++ +    D  TY   I G CK G +  A ++
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              M    +  D VTYN ++   C +GK+KE  E+ +   ++ C  +V++Y ILI    +
Sbjct: 203 LDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
              V +A+ + + +R+K C  D  T+ VLING+CK G L++AI+ LN +   G       
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      GR  DA   +  M + GC  +  T N L+N   +   +  AI + ++M 
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMP 379

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           + GC+P  +SYN L++ LCK ++   A  ++  M+ +G  PD++TY+ L+  LC+  K+D
Sbjct: 380 QHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 439

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A+++  Q   KG +P +  YN +I GL   GK +DA++L   MK +   P+++TY+TL+
Sbjct: 440 VAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GL + G  D+A+  ++ + E  ++P+ I+YN  + GLC   +   A +FL   + RG  
Sbjct: 500 GGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCK 559

Query: 606 PTTITWHILVRAVMNNG 622
           PT  ++ IL+  +   G
Sbjct: 560 PTETSYMILIEGLAYEG 576



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 227/423 (53%), Gaps = 19/423 (4%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V  N  +  L + G  +E  +  + M       D     S I GLCK G    A RV   
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           + +SG   D +TYN +I G+C+ G+I    +L + M      +VV+YN ++R L ++GK+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSP--DVVTYNTILRTLCDSGKL 228

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
            EA+ + +   ++ C  D  T+ +LI   CK   + +A+++L+E+ + G           
Sbjct: 229 KEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVL 288

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 EGRL +A   +N M  +GC+ N  T N ++       +  +A     EM RKGC
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP+VV++N LIN LC+    G A   +++M + G  P+ ++Y+ L++ LC+ KK++ A++
Sbjct: 349 SPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE 408

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                + +G  PD+  YN L+  LC  GKV+ A+++ + +  + C P L+TYNT++DGL 
Sbjct: 409 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLS 468

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D A+++ + +  + L+PDII+Y+  + GL    ++ +A  F +D    G+ P  I
Sbjct: 469 KVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAI 528

Query: 610 TWH 612
           T++
Sbjct: 529 TYN 531



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 51/445 (11%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           +AL L D  +  P        ++ ILR L D   +     +L+    ++CY P+ +  ++
Sbjct: 198 SALQLLDRMSVSPDVV----TYNTILRTLCDSGKLKEAMEVLDRQMQRECY-PDVITYTI 252

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           +                         EA   C++    +A + L+ + +KG KPDV +Y 
Sbjct: 253 L------------------------IEA--TCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +ING+ K G L  A+   + M   G + NV+ +NI++      G +M A++    ++ +
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
               P+VVT+N++IN LC+ G     +++ ++M ++    +S +Y   +H LCK   +E 
Sbjct: 347 -GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIR 318
           A      MV  G + D VTYN ++   C+ GK+    E+   +G KGC  V ++YN +I 
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL + GK D+AI + + ++ K    D  T+  L+ GL + G +++AI   +++EE     
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEE----- 520

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                         G K NA T NS+M G  +A +   AI     M  +GC PT  SY  
Sbjct: 521 -------------MGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 439 LINGLCKVERFGEAYSFVKEMLEKG 463
           LI GL       EA   + E+  +G
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRG 592



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 129/221 (58%), Gaps = 3/221 (1%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+ +   ++  +LE      ++M  +G  P +++  +LI GLCK  +  +A   ++ + +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  PD+ITY++LI+G C++ +I  AL+L     +   +PDV  YN ++  LC +GK+++
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKE 230

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A+++     +R C P+++TY  L++   K     +A+++ + + ++  +PD+++YN+ + 
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           G+C   R+ +A  FLN     G  P  IT +I++R++ + G
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTG 331


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 161/527 (30%), Positives = 289/527 (54%), Gaps = 26/527 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           ILC++ +  +A   L  + ++G   D+ +Y T+I GL     +  A  +F  M + G   
Sbjct: 356 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 415

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           + + Y  L+ G  + G+   A ++ + ++ +T  Y     P +++Y+++I+GLCK  R D
Sbjct: 416 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 475

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E+++ MK      D  +Y + IHG C +G  E A+ ++ EM++ GI  D  T + +I
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ GK+ E  +L EV+ ++GC L+VV+   L++GL    ++ +A  ++  +++  C 
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL-VNRMDKHGCKLNAYTC 401
            +  T   L+ GLC++G +  A+++   +       L+D +   +N      CK NA + 
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHKNM-------LSDTSPYGIN------CKPNAISY 642

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + +++G  +  + + A  LFKEM   G  P V+SY +LI+G C+  ++ +A     EM++
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +PD+ T+S+LI+ LC+  K+  A +L    +Q+G  P+   Y  L+ GLC   ++ +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------RLRPDIIS 575
           A QL+  M+K  C+P++VTY TLM GL +TG+   ALE+   +L +        +PD+IS
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 822

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y+I + GLC   R  +A E   +    G++P  I++  L+     +G
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSG 869



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/550 (30%), Positives = 285/550 (51%), Gaps = 36/550 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           ILC++ +  +A   L  + ++G   D+ +Y T+I GL     +  A  +F  M + G   
Sbjct: 63  ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 122

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           + + Y  L+ G  + G+   A ++ + ++ +T  Y     P +++Y+++I+GLCK  R D
Sbjct: 123 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 182

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E++  MK      D  +Y S IHG C +G  E A+ ++ EM++ GI  D  T   +I
Sbjct: 183 EARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLI 242

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D FC+ GK+ E  EL EVM  +GC L++V+Y+ LI+GL    ++ EA  ++  +++  C 
Sbjct: 243 DMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCR 302

Query: 343 ADSTTHGVLINGLCKNGYLNKAI----QILNEVEEGG--------------------EGR 378
            D+  +G L+ GLC+ G +N A+    ++LN+  + G                    EG+
Sbjct: 303 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGK 362

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A  L+  M + GC L+  T ++L+ G     ++  A +LF  M + GC P  ++Y T
Sbjct: 363 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGW------KPDMITYSLLINGLCQSKKIDMALKLCC 492
           L+ GLC+      A    +EML          KP +I+YS++I+GLC+ ++ D A +L  
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +   +G  PDV  Y  LIHG C +GK E A  L++ M      P++ T + L+D L K G
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              +A ++   +++     D+++    +KGLC   R+S A +        G +P  +T  
Sbjct: 543 KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602

Query: 613 ILVRAVMNNG 622
            L++ +  +G
Sbjct: 603 TLMKGLCQSG 612



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 268/522 (51%), Gaps = 48/522 (9%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI---------LIDGF 180
           GL PD +++  +IN L     +   LA    +  RG   ++V Y+I         LID  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K+G  + A E+ E ++    +  ++VTY+ +I GLC   R  E   ++  M+K     D
Sbjct: 65  CKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 123

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIF-----VDAVTYNAMIDGFCRAGKIKE 294
           + TY + + GLC+ GN+  A ++++EM+ ++G +        ++Y+ +IDG C+  +  E
Sbjct: 124 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 183

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             EL++ M  +G + +V+SY  LI G   +GK ++A  ++  + +     D TT GVLI+
Sbjct: 184 ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
             CK                  EG++ +A  L+  M   GC L+  T ++L+ G     +
Sbjct: 244 MFCK------------------EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE-------KGWKP 466
           +  A  LF  M + GC P  ++Y TL+ GLC+  +   A    +EML        K  +P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ T S+LI+ LC+  K+  A +L    +Q+G   D+  Y+ LI GLC   ++ +A  L+
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------RLRPDIISYNITL 580
            +M+K  C P+ +TY TLM GL +TG+ + AL++   +L +      + +P +ISY+I +
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC   R  +A E   +   +GI+P  I++  L+     +G
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG 507



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/462 (32%), Positives = 246/462 (53%), Gaps = 32/462 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+ ++A+     +  +G+ PDV SY T+I+G   SG    A  +F+EM + G++ +
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V   ++LID   KKG  + A ++ E +V++     +VVT   ++ GLC   R  +  +++
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLE-VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES----GIFV--DAVTYNAMI 283
            +M+K     +  T  + + GLC++GN++ A  +++ M+      GI    +A++Y+ +I
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 646

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG C+ G+  E  EL++ M   G + +V+SY  LI G   +GK  +A  ++  + +    
Sbjct: 647 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D TT  VLI+ LCK                  EG++ +A  L+  M + GC  N  T  
Sbjct: 707 PDVTTFSVLIDMLCK------------------EGKVIEANELLEVMIQRGCIPNTVTYT 748

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE- 461
           +L+ G     ++  A  LF +M + GC P VV+Y TL+ GLC+      A    K+ML  
Sbjct: 749 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 808

Query: 462 -----KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
                  +KPD+I+YS++I+GLC+  + D A +L  +    G  P+V  Y  LIHG C +
Sbjct: 809 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 868

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           GK+EDA  L++ M  +    N VTY+ ++ G  K G  DKAL
Sbjct: 869 GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 189/376 (50%), Gaps = 41/376 (10%)

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI---------LIRG 319
           +G+F D+ T+N +I+  C   ++ E       + R+G + ++V+Y+I         LI  
Sbjct: 4   AGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDI 63

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L + GKV EA  + E++ ++ C  D  T+  LI GLC                   E R+
Sbjct: 64  LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM------------------EHRI 105

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM----SRKG--CSPTV 433
           ++A  L   M K GC+ +A T  +LM G  Q   +  A+ L +EM     R G  C PT+
Sbjct: 106 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 165

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           +SY+ +I+GLCK  R  EA    KEM  +G  PD+I+Y+ LI+G C S K + A  L  +
Sbjct: 166 ISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L  G  PDVT   +LI   C  GKV +A +L   M  R C+ ++VTY+TL+ GL     
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF----EFLNDALCRG---ILP 606
             +A +++  + +   RPD I+Y   +KGLC   +++ A     E LND    G   I P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 607 TTITWHILVRAVMNNG 622
              T  +L+  +   G
Sbjct: 346 DVTTSSMLIDILCKEG 361



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 188/375 (50%), Gaps = 64/375 (17%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC+K +  +A + L  + ++G   DV +  T++ GL     +  A  +F +M + G   
Sbjct: 537 MLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 596

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFD 223
           NVV    L+ G  + G+   A E+ + ++ +TS Y     PN ++Y+++I+GLCKCGR D
Sbjct: 597 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 656

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E++  MK      D  +Y S IHG C++G  + A+ ++ EMV+ G+  D  T++ +I
Sbjct: 657 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 716

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ GK+ E  EL EVM ++GC+ N V+Y  L++GL  N ++ EA  ++  +++  C 
Sbjct: 717 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 776

Query: 343 ADSTTHG-----------------------------------------VLINGLCKNGYL 361
            D  T+G                                         ++I+GLCK+G  
Sbjct: 777 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 836

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           ++A ++  E++  G                  G+L DA  L N M   G +LNA T + +
Sbjct: 837 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 896

Query: 405 MNGFIQASKLENAIF 419
           ++GF +  +++ A+F
Sbjct: 897 IHGFCKEGQIDKALF 911



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 131/237 (55%), Gaps = 14/237 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I  + ++     A  +F  M +I        F     +LC++ +  +A   L  + ++
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  +Y T++ GL  +  +  A  +F +M + G   +VV Y  L+ G  + G+   A
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798

Query: 190 KEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            E+ ++++ +T  Y     P+V++Y+++I+GLCK GR DE  E++  MK      +  +Y
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 858

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI-KECFELWE 300
            S IHG C++G +E A+ ++ EMV+ G+ ++AVTY+ MI GFC+ G+I K  F+  E
Sbjct: 859 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKME 915



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 15/214 (7%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY---------SLL 474
           M   G  P   ++N LIN LC V+R  E  + +  ++ +G+ PD++TY         S+L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+ LC+  K+  A +L    +Q+G   D+  Y+ LI GLC   ++ +A  L+ +M+K  C
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------RLRPDIISYNITLKGLCSCSR 588
            P+ +TY TLM GL +TG+ + AL++   +L +      + +P +ISY+I + GLC   R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +A E   +   +G++P  I++  L+    ++G
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 21/198 (10%)

Query: 54  VVHVSRILELIEIQKCYCPEDVA-LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--- 109
           V+  + +LE++ IQ+   P  V   ++++    N    +A  +F +M ++ GC   +   
Sbjct: 725 VIEANELLEVM-IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL-GCLPDVVTY 782

Query: 110 ------LCR----KRQFEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAV 157
                 LC+    K   E  K+ L+   + G   KPDV SY  +I+GL K G    A  +
Sbjct: 783 GTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 842

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           F EM   GV  NV+ Y  LI GF + G    AK ++  +V +  V  N VTY+VMI+G C
Sbjct: 843 FKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV-DQGVQLNAVTYSVMIHGFC 901

Query: 218 KCGRFDECLEMWDRMKKN 235
           K G+ D+ L  + +M+ N
Sbjct: 902 KEGQIDKAL--FQKMEAN 917


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 162/498 (32%), Positives = 267/498 (53%), Gaps = 28/498 (5%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRA 189
           + P+  +Y  V+NGL K+     A  V  EM + + V  ++V Y+ +I+GF K+G+  RA
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            EI   +V    + P+VVTY  +++GLC+ G+ D   EM   MK    E D FT+ + I 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GC 307
           G C A  V+ A ++Y+E++ S   +DAV+ +A+I G CR  +I E +EL++ M  +  G 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 308 --LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +VV+Y  LI G  ++G +++A+ +  ++  + C  +  T+  L++GLCK G L++A+
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                              L  RM   GC  N  T  +L++G   A K++ A  L  EM+
Sbjct: 245 D------------------LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
              C    VSYN L++G C++ R  EA    KEM  K   PD ITY+ L+ G C + +++
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346

Query: 486 MALKLCCQF-LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A  L        G  PDV  Y+I++ G   A +  +A +    M  RN  PN VTY++L
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G  + A+E+  ++     +PD+++Y I ++GLC   R  +A   L + + + +
Sbjct: 407 IDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462

Query: 605 LPTTITWHILVRAVMNNG 622
            P+  T++ ++ A+   G
Sbjct: 463 EPSVGTFNSVIGALCRLG 480



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 234/468 (50%), Gaps = 37/468 (7%)

Query: 110 LCRKRQFEKAKRFLNSL--WEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR+R+  +A      +   E G  KPDV +Y  +I+G  KSG+L  A+ +   M  R  
Sbjct: 161 LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC 220

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             NVV Y+ L+ G  K GD  +A +++ R+  +  V PNVVTY  +I+GLC   + D   
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAAR 279

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + D M       D+ +Y + + G C+ G +E A+++++EM       D +TY  ++ GF
Sbjct: 280 LLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGF 339

Query: 287 CRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           C A +++E   L E M     ++  VV+Y+I++ G     +  EA    + +  +N   +
Sbjct: 340 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 399

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + T+  LI+GLCK G +N A+++L  V+                      K +  T   +
Sbjct: 400 AVTYSSLIDGLCKAGRVNHAMEVLKNVD----------------------KPDVVTYTIV 437

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G     + E A+ L +EM  K   P+V ++N++I  LC++    EA+  +  M   G 
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG--------FTPDVTMYNILIHGLCSA 516
           +P M+TY+ L+ G  ++ ++++A +L     +K           P+   ++ LI GLC A
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKA 556

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            +++ A+ +   ++ R C P       ++DGL + G  ++A ++ N I
Sbjct: 557 REIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 167/340 (49%), Gaps = 25/340 (7%)

Query: 55  VHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFG 104
           V  +R+L + E+    CP D     +++  Y +    ++A  +F+ M           + 
Sbjct: 275 VDAARLL-MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYT 333

Query: 105 CEAGILCRKRQFEKAKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
           C     C   + E+A+  L ++    G+ PDV +Y  V+ G  ++   + A     EM  
Sbjct: 334 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 393

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           R V  N V Y+ LIDG  K G    A E     V++    P+VVTY ++I GLC   R +
Sbjct: 394 RNVAPNAVTYSSLIDGLCKAGRVNHAME-----VLKNVDKPDVVTYTIVIEGLCGTDRTE 448

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E L + + M     E    T+ S I  LC+ G+++ A ++   M   G+    VTY  ++
Sbjct: 449 EALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508

Query: 284 DGFCRAGKIKECFELWEVMGRKG-----CLNVV---SYNILIRGLLENGKVDEAISIWEL 335
           +GF R G+++  +EL+EVM RK        N+V   +++ LIRGL +  ++D+A+++ E 
Sbjct: 509 EGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 568

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LR + C         +++GL + G   +A +++N + + G
Sbjct: 569 LRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 184/415 (44%), Gaps = 26/415 (6%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           ++L ++E +KC        S++    K    D+ALD+F+RM    GC   +         
Sbjct: 210 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS-KGCVPNVVTYTTLIHG 268

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A+  ++ +       D  SY  +++G  + G +  A  +F EM  +    +
Sbjct: 269 LCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPD 328

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y  L+ GF        A+ + E +     + P+VVTY++++ G  +  RF E  E  
Sbjct: 329 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 388

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       ++ TY S I GLCKAG V  A  V + + +     D VTY  +I+G C  
Sbjct: 389 QEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVVTYTIVIEGLCGT 444

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            + +E   L E M  K    +V ++N +I  L   G +DEA  +   +          T+
Sbjct: 445 DRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 504

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G  + G +  A ++  EV      + + AA+LV           A++  +L+ G 
Sbjct: 505 TTLLEGFSRTGRMEIAYELF-EVMRRKAKKSSSAANLVPE--------QAFS--ALIRGL 553

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            +A +++ A+ + +E+  + C P       +++GL +  R  EA   +  + + G
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 5/202 (2%)

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE-KGWKPDMITYSLLINGLCQSKKI 484
           R+  +P   +YN ++NGLCK     +AY  +KEM + K   PD++TYS +ING C+  ++
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 485 DMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           D A ++  + + + G  PDV  Y  ++ GLC  GK++ A ++   MK +   P+  T++ 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR- 602
           L+ G       D+AL+++  IL    R D +S +  + GLC   R+ +A+E   +   R 
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 603 --GILPTTITWHILVRAVMNNG 622
                P  +T+  L+     +G
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSG 203



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 6/169 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E+A   L  +  K ++P V ++ +VI  L + GD+  A  +   M   G+E  
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWE---RLVMETSVYPNVV---TYNVMINGLCKCGRFD 223
           +V Y  L++GF + G    A E++E   R   ++S   N+V    ++ +I GLCK    D
Sbjct: 501 MVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREID 560

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           + + + + ++  E E       + + GL +AG  E A ++   + + G+
Sbjct: 561 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 159/491 (32%), Positives = 259/491 (52%), Gaps = 36/491 (7%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L+ +  KP+V ++ T++NGL + G ++ A+A+ D M E G++ N + Y  ++DG  K GD
Sbjct: 170 LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNV-----MINGLCKCGRFDECLEMWDRMKKNER-EK 239
            + A  +  ++   + + PNVV + +     MING C  GR+ E  ++   M + ++   
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D  TY + I+   K G    AE +Y EM+  GI    +TY++MIDGFC+  ++     ++
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +M  KGC  +++++N LI G     +VD+ I +   + E    A++ T+  LI+G C+ 
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G LN A  +L E                  M   G   N  TCN+L++G     KL++A+
Sbjct: 410 GDLNAAQDLLQE------------------MVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451

Query: 419 FLFKEMSRK-----------GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +FK M +            G  P V +YN LI+GL    +F EA    +EM  +G  PD
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            ITY+ +I+GLC+  ++D A ++      K F+P+V  +  LI+G C AG+V+D L+L+ 
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M +R  V N +TY TL+ G  K G+ + AL+I+  ++   + PD I+    L GL S  
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631

Query: 588 RMSDAFEFLND 598
            +  A   L D
Sbjct: 632 ELKRAVAMLED 642



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 251/485 (51%), Gaps = 18/485 (3%)

Query: 91  KALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           +ALD+F +M +     F      LCR+ +  +A   L+ + E GL+P+  +YGT+++G+ 
Sbjct: 166 EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC 225

Query: 147 KSGDLLGALAVFDEMFE-RGVETNVVCYNI-----LIDGFFKKGDYMRAKEIWERLVMET 200
           K GD + AL +  +M E   ++ NVV + +     +I+GF   G +  A+++ + ++   
Sbjct: 226 KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+VVTYN +IN   K G+F E  E++D M        + TY S I G CK   ++ A
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           E ++  M   G   D +T+N +I G+CRA ++ +  +L   M   G + N ++Y  LI G
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + G ++ A  + + +       +  T   L++GLC NG L  A+++   +++      
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD-- 463

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA+   N     G + +  T N L++G I   K   A  L++EM  +G  P  ++YN++
Sbjct: 464 IDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+GLCK  R  EA      M  K + P+++T++ LING C++ ++D  L+L C+  ++G 
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 578

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
             +   Y  LIHG    G +  AL ++  M      P+ +T   ++ GL+   +  +A+ 
Sbjct: 579 VANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVA 638

Query: 560 IWNHI 564
           +   +
Sbjct: 639 MLEDL 643



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 269/540 (49%), Gaps = 48/540 (8%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G++ R  + +        +  + +  + YS+  ++        L  AL+ F ++ + G  
Sbjct: 86  GVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFH 145

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             VV ++ L+ G   +     A +++ ++       PNVVT+  ++NGLC+ GR  E + 
Sbjct: 146 PTVVTFSTLLHGLCVEDRISEALDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVA 200

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTY-----NA 281
           + DRM ++  + +  TY + + G+CK G+   A  + R+M E S I  + V +       
Sbjct: 201 LLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTC 260

Query: 282 MIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           MI+GFC +G+  E  +L + M   +K   +VV+YN LI   ++ GK  EA  +++ +  +
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
                + T+  +I+G CK                  + RL  A  +   M   GC  +  
Sbjct: 321 GIIPSTITYSSMIDGFCK------------------QNRLDAAEHMFYLMATKGCSPDII 362

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L+ G+ +A ++++ I L  EM+  G     ++Y TLI+G C+V     A   ++EM
Sbjct: 363 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 422

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK------------GFTPDVTMYN 507
           +  G  P+++T + L++GLC + K+  AL++  + +QK            G  PDV  YN
Sbjct: 423 VSSGVCPNVVTCNTLLDGLCDNGKLKDALEMF-KAMQKSKMDIDASHPFNGVEPDVQTYN 481

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI GL + GK  +A +LY  M  R  VP+ +TYN+++ GL K    D+A ++++ +  +
Sbjct: 482 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV---RAVMN-NGA 623
              P+++++   + G C   R+ D  E   +   RGI+   IT+  L+   R V N NGA
Sbjct: 542 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 259/519 (49%), Gaps = 44/519 (8%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C K  F  A      + + G  P V ++ T+++GL     +  AL +F +M     + NV
Sbjct: 126 CSKLPF--ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNV 179

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +  L++G  ++G  + A  + +R+ +E  + PN +TY  +++G+CK G     L +  
Sbjct: 180 VTFTTLMNGLCREGRVVEAVALLDRM-LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238

Query: 231 RMKKNEREKDSFTY------CSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMI 283
           +M++    K +            I+G C +G    A+++ +EM+E   I  D VTYNA+I
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALI 298

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           + F + GK  E  EL++ M  +G + + ++Y+ +I G  +  ++D A  ++ L+  K C+
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T   LI G C+   ++  I++L+E+ E G         LV          N  T  
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG---------LVA---------NTITYT 400

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++GF Q   L  A  L +EM   G  P VV+ NTL++GLC   +  +A    K M + 
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460

Query: 463 -----------GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                      G +PD+ TY++LI+GL    K   A +L  +   +G  PD   YN +IH
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIH 520

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC   ++++A Q++ +M  ++  PN+VT+ TL++G  K G  D  LE++  +    +  
Sbjct: 521 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 580

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           + I+Y   + G      ++ A +   + +  G+ P TIT
Sbjct: 581 NAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 222/451 (49%), Gaps = 38/451 (8%)

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           GD +R++ +           P+V+ +  ++  + + GR D  + +  +M+      ++++
Sbjct: 67  GDMVRSRPL-----------PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           +   +   C    +  A   + ++ + G     VT++ ++ G C   +I E  +L+  M 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 304 RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           +    NVV++  L+ GL   G+V EA+++ + + E     +  T+G +++G+CK G    
Sbjct: 176 KP---NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 232

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A+ +L ++EE    +      ++  +++  C         ++NGF  + +   A  L +E
Sbjct: 233 ALNLLRKMEEVSHIK---PNVVIWPLERRTC---------MINGFCSSGRWSEAQQLLQE 280

Query: 424 M-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           M  RK  SP VV+YN LIN   K  +F EA     EML +G  P  ITYS +I+G C+  
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++D A  +      KG +PD+  +N LI G C A +V+D ++L   M +   V N +TY 
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN----- 597
           TL+ G  + GD + A ++   ++   + P++++ N  L GLC   ++ DA E        
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460

Query: 598 ----DA--LCRGILPTTITWHILVRAVMNNG 622
               DA     G+ P   T++IL+  ++N G
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNILISGLINEG 491



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 15/225 (6%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +GF +   LE+AI LF +M R    P+V+ +  L+  + ++ R     S  ++M  + 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              +  ++++L+   C   K+  AL    +  + GF P V  ++ L+HGLC   ++ +AL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M    C PN+VT+ TLM+GL + G   +A+ + + +LE+ L+P+ I+Y   + G+
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 584 CSCSRMSDAFEFLNDALCRG------ILPTTITWHILVRAVMNNG 622
           C   +M D    LN  L R       I P  + W +  R  M NG
Sbjct: 225 C---KMGDTVSALN--LLRKMEEVSHIKPNVVIWPLERRTCMING 264



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 8/129 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           SVI    K S  D+A  +F  M           F       C+  + +        +  +
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 576

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  +  +Y T+I+G  K G++ GAL +F EM   GV  + +    ++ G + K +  RA
Sbjct: 577 GIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636

Query: 190 KEIWERLVM 198
             + E L M
Sbjct: 637 VAMLEDLQM 645


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 172/598 (28%), Positives = 305/598 (51%), Gaps = 81/598 (13%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F SA++   Y      F+ ++    +      + ++ + ++ ++    E   + V +AY
Sbjct: 50  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 109

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P+KA+++F RM + F C                          +  V S+ +V+N
Sbjct: 110 GKAHLPEKAIELFGRMVDEFQC--------------------------RRTVRSFNSVLN 143

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            +++ G           +F R +E            F++ G           +  +T++ 
Sbjct: 144 VIIQEG-----------LFHRALE------------FYECG-----------VGGKTNIS 169

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNV+++N++I  +CK G  D  +E++  M   + E D FTYC+ + GLCK   ++ A  +
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM   G F  +VT+N +I+G C+ G +    +L + M  KGC+ N V+YN +I GL  
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D+A+S+ + +    C  +  T+G LINGL K                  +GR  D 
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK------------------QGRSVDG 331

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L++ +++ G   N Y  ++L++G  +  K E A+ L+K+M  KGC P +V Y+ LI+G
Sbjct: 332 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 391

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+  +  EA   + EM+ KG  P+  TYS LI G  ++     A+++  +  +    P+
Sbjct: 392 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              Y++LIHGLC  GK+ +A+ ++++M  R   P++V Y++++ GL   G  +  L+++N
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511

Query: 563 HIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +L  E   +PD+++YNI L+ LC  + +S A + LN  L RG  P  IT +I + A+
Sbjct: 512 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 254/541 (46%), Gaps = 61/541 (11%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI----QKCYCPE 73
           P  A+ LF     E     +   F+ +L  +I   L     R LE  E     +    P 
Sbjct: 115 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLF---HRALEFYECGVGGKTNISPN 171

Query: 74  DVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFL 123
            ++ + VI+A  K  + D+A++VF+ M  I  CE  +         LC++ + ++A   L
Sbjct: 172 VLSFNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + +  +G  P   ++  +INGL K GD++    + D MF +G   N V YN +I+G   K
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G   +A  + +R+V    V PN VTY  +INGL K GR  + + +   +++     + + 
Sbjct: 291 GKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + I GL K    E A  ++++MVE G   + V Y+A+IDG CR GK+ E  E+   M 
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            KGC  N  +Y+ LI+G  + G   +AI +W+ + + NC  +   + VLI+GLC+     
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE----- 464

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                        +G+L +A  +   M   G + +    +S+++G   A  +E  + LF 
Sbjct: 465 -------------DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511

Query: 423 EM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           EM        P VV+YN L+  LCK      A   +  ML++G  PD+IT ++ +N L +
Sbjct: 512 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 571

Query: 481 S---------------------KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
                                 ++I  A K+    LQK   P+ + +  +I  LC   KV
Sbjct: 572 KLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 631

Query: 520 E 520
           +
Sbjct: 632 Q 632



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 42/388 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + +KA   L+ +      P+  +YGT+INGLVK G  +  + +   + ERG   N
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+ LI G FK+     A  +W+++V E    PN+V Y+ +I+GLC+ G+ DE  E+ 
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMV-EKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       ++FTY S I G  K GN + A RV++EM ++    + + Y+ +I G C  
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADST 346
           GK++E   +W  ++GR    +VV+Y+ +I GL   G V+  + ++   L +E +   D  
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +L+  LCK   ++ AI +LN              S+++R    GC  +  TCN  +N
Sbjct: 526 TYNILLRALCKQNSISHAIDLLN--------------SMLDR----GCNPDLITCNIFLN 567

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVS---YNTLINGLCKVERFGEAYSFVKEMLEKG 463
                              R+  +P        + L+  L K +R   A   ++ ML+K 
Sbjct: 568 AL-----------------REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKF 610

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLC 491
             P+  T+  +I  LC+ KK+   +  C
Sbjct: 611 LPPNASTWERIIPELCKPKKVQAIIDKC 638


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/670 (26%), Positives = 327/670 (48%), Gaps = 65/670 (9%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
            K +  ++K +KNP  AL +F+S  +E G+ H+   +  ++ +L        +  +L   
Sbjct: 7   PKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAET 66

Query: 65  EIQ-KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKR 114
            +       E V +  ++ YG+     +A+DVF+RM + F CE           IL   R
Sbjct: 67  RMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERM-DFFNCEPSVQSYNAIMNILVEYR 125

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            F++A +    + +KG+ PDVY++   +    ++     A  + + M  +G E++ V Y 
Sbjct: 126 YFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYC 185

Query: 175 ILIDGFFKKGDYMRAKEIWERL----------------------------------VMET 200
            +I GF+++   + A E++E +                                  V++ 
Sbjct: 186 TVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKR 245

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V PN+ T N+ I G C+    +E + + D + +     D  TY + I GLCK   V  A
Sbjct: 246 GVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFKVVEA 304

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           E   R+MV  G   D  TYN++IDG+C+ G ++   ++      KG + +  +Y  LI G
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L ++G +D AI+++    EK    +      L+ GL + G + +A++++NE+ E G    
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G ++DA +LV      G   + +T N+L++G+ +  KL+NAI +  
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVD 484

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M   G SP V++YN+++NGLCK  ++ +     K M+EKG  P++ITY++L    C+++
Sbjct: 485 RMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKAR 544

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-TY 541
           K++ AL L  +   KG TPDV  +  L+ G C  G ++ A QL+  + ++    + + TY
Sbjct: 545 KVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATY 604

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N +++      + + A +++N + E    PD  +Y + + G C    ++  + FL   + 
Sbjct: 605 NIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIE 664

Query: 602 RGILPTTITW 611
           +G++P+  T+
Sbjct: 665 KGLIPSLTTF 674



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 261/537 (48%), Gaps = 34/537 (6%)

Query: 107 AGILCRKRQFEKAKRFLNSLW-EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           A ++  ++   KA    NS+  E G K  + +Y  +I  L   G+       F+ M E  
Sbjct: 11  AAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGE-------FEAMEEVL 63

Query: 166 VETNVVCYNILIDGFF--------KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            ET +   N L++G +        +KG    A +++ER+    +  P+V +YN ++N L 
Sbjct: 64  AETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDF-FNCEPSVQSYNAIMNILV 122

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           +   FD+  +++ RM+      D +T+   +   C+      A R+   M   G    AV
Sbjct: 123 EYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAV 182

Query: 278 TYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
            Y  +I GF       E  EL+E M G   C +++++N LI  L   G V E+  +   +
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV 242

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG----------------GEGRLA 380
            ++  + +  T  + I G C+   LN+AI++L+ V  G                   ++ 
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVV 302

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A   + +M   G + + +T NS+++G+ +   ++NA  + ++ + KG  P   +Y +LI
Sbjct: 303 EAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           NGLC+      A +   E +EKG KP+++  + L+ GL Q   I  ALKL  +  + G +
Sbjct: 363 NGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+  YN++I+GLC  G V DA  L  +   +  +P++ T+NTL+DG  K    D A+EI
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            + +    + PD+I+YN  L GLC   +  D        + +G +P  IT++IL  +
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTES 539



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 203/399 (50%), Gaps = 27/399 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    + A + L     KG  PD  +Y ++INGL + GD+  A+ VF+E  E+G++ N+
Sbjct: 331 CKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNL 390

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V  N L+ G  ++G  ++A ++   +  E    P++ TYN++INGLCK G    C+   D
Sbjct: 391 VLCNTLVKGLSQQGLILQALKLMNEMS-ENGCSPDIWTYNLVINGLCKIG----CVSDAD 445

Query: 231 RMKKNEREK----DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  +   K    D FT+ + I G CK   ++ A  +   M   G+  D +TYN++++G 
Sbjct: 446 NLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGL 505

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AGK ++    +++M  KGC+ N+++YNIL     +  KV+EA+++ E ++ K    D 
Sbjct: 506 CKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDV 565

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
              G L+ G C NG L+ A Q+   V+E                 ++       T N ++
Sbjct: 566 VNFGTLMKGFCDNGDLDGAYQLFKRVDE-----------------QYKFSHTIATYNIMI 608

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           N F     +  A  LF +M   G SP   +Y  +I+G CK       YSF+   +EKG  
Sbjct: 609 NAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLI 668

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           P + T+  ++N LC  +++  A+ +    + KG  P+V 
Sbjct: 669 PSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 44/284 (15%)

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
           K  C  D    VI A  K  +PD    VF     I G      C+K + + A   ++ +W
Sbjct: 437 KIGCVSDADNLVIDAIAKGHLPD----VFTFNTLIDG-----YCKKLKLDNAIEIVDRMW 487

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID--------- 178
             G+ PDV +Y +++NGL K+G     +  F  M E+G   N++ YNIL +         
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVE 547

Query: 179 --------------------------GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
                                     GF   GD   A ++++R+  +      + TYN+M
Sbjct: 548 EALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIM 607

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           IN        +   +++++M +N    DS+TY   I G CK GN+          +E G+
Sbjct: 608 INAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
                T+  +++  C   ++ E   +  +M  KG +  V   I 
Sbjct: 668 IPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIF 711


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 255/483 (52%), Gaps = 19/483 (3%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M ER V  +   Y ILIDG  K G    A++++++L + + V P+ V Y  +I+GLC   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKL-LHSGVTPSTVAYTSLIHGLCMAN 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FD+  E++  M +        TY   I   CK G +E A  + ++M+E G   D VTYN
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++DG C++G+++E   L+  M R GC  N  S+N +I GL +  K+D+A  ++  +  +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
           +   DS ++G+LI+GL K G LN+A ++   + + G                    L +A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L   M   GC+ + +T N L++   +  K++ A  L K M+  G  P VV+Y+TLI+G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC + R  +A   +++M+++  KP ++T + LI+GLC++ +I  A ++    +  G +PD
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YN L+HG C AG+ E A +L S+M  R   PN+VTY  L+ GL K     +A  ++ 
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +      P++ +Y   + G CS  ++    +   + +C GI P  + +  L   +  +G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 623 AST 625
            S 
Sbjct: 480 RSA 482



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 261/491 (53%), Gaps = 20/491 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  +   A+     L   G+ P   +Y ++I+GL  +     A  +F +M  RG   +
Sbjct: 20  LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN++ID   K+G    A ++ ++++ +  V P+VVTYN +++GLCK GR +E L ++
Sbjct: 80  PVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEEALLLF 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M++     +  ++ + I GLC+   ++ A +V+ EM    I  D+ +Y  +IDG  +A
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E ++L+  M   G   + V+YN++I G+     +DEA+ +++ +R K C     T 
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+  CK G +++A ++L                   RM   G   +  T ++L++G 
Sbjct: 259 NILIDAHCKRGKMDEAFRLLK------------------RMTDDGHVPDVVTYSTLISGL 300

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              +++++A  L ++M ++ C PTVV+ NTLI+GLCK  R  EA   +  M+  G  PD+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ L++G C++ + + A +L    + +G  P+V  Y  L+ GLC A ++ +A  +++ 
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           MK   C PNL TY  L+ G    G  D  L+++  ++   + PD + Y      LC   R
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 589 MSDAFEFLNDA 599
            + A E L + 
Sbjct: 481 SARALEILREG 491



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 217/486 (44%), Gaps = 89/486 (18%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ 115
           I+  + P+ V   +V+    K+   ++AL +F  M E  GC             LC++ +
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSK 165

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN- 174
            ++A +  + +  + + PD +SYG +I+GL K+G L  A  +F  M + G+  + V YN 
Sbjct: 166 IDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225

Query: 175 ----------------------------------ILIDGFFKKGDYMRAKEIWERLVMET 200
                                             ILID   K+G    A  + +R+  + 
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V P+VVTY+ +I+GLC   R D+   + + M K + +    T  + IHGLCKAG ++ A
Sbjct: 286 HV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
             V   MV SG   D VTYN ++ G CRAG+ +   EL   M  +G   NVV+Y  L+ G
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L +  ++ EA  ++  ++   C  +  T+  LI G C  G ++  +++  E+   G    
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAY---TCNSLMNGFIQASKLENAIF 419
                         GR A A  ++ R  +   +  A+        ++G + A K+E A+ 
Sbjct: 465 HVVYGTLAAELCKSGRSARALEIL-REGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALG 523

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS--------------------FVKEM 459
             ++M R G  P      +L+ GLCK  + GEA +                    FV+EM
Sbjct: 524 FVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEM 583

Query: 460 LEKGWK 465
           + KG++
Sbjct: 584 VGKGYE 589


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 173/598 (28%), Positives = 306/598 (51%), Gaps = 81/598 (13%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F SA++   Y      F+ ++    +      + ++ + ++ ++    E   + V +AY
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P+KA+++F RM + F       CR+                     V S+ +V+N
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQ------CRR--------------------TVRSFNSVLN 159

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            +++ G           +F R +E            F++ G           +  +T++ 
Sbjct: 160 VIIQEG-----------LFHRALE------------FYECG-----------VGGKTNIS 185

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNV+++N++I  +CK G  D  +E++  M   + E D FTYC+ + GLCK   ++ A  +
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM   G F  +VT+N +I+G C+ G +    +L + M  KGC+ N V+YN +I GL  
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D+A+S+ + +    C  +  T+G LINGL K                  +GR  D 
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK------------------QGRSVDG 347

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L++ +++ G   N Y  ++L++G  +  K E A+ L+K+M  KGC P +V Y+ LI+G
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+  +  EA   + EM+ KG  P+  TYS LI G  ++     A+++  +  +    P+
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              Y++LIHGLC  GK+ +A+ ++++M  R   P++V Y++++ GL   G  +  L+++N
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527

Query: 563 HIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +L  E   +PD+++YNI L+ LC  + +S A + LN  L RG  P  IT +I + A+
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 254/541 (46%), Gaps = 61/541 (11%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI----QKCYCPE 73
           P  A+ LF     E     +   F+ +L  +I   L     R LE  E     +    P 
Sbjct: 131 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLF---HRALEFYECGVGGKTNISPN 187

Query: 74  DVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFL 123
            ++ + VI+A  K  + D+A++VF+ M  I  CE  +         LC++ + ++A   L
Sbjct: 188 VLSFNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + +  +G  P   ++  +INGL K GD++    + D MF +G   N V YN +I+G   K
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G   +A  + +R+V    V PN VTY  +INGL K GR  + + +   +++     + + 
Sbjct: 307 GKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + I GL K    E A  ++++MVE G   + V Y+A+IDG CR GK+ E  E+   M 
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            KGC  N  +Y+ LI+G  + G   +AI +W+ + + NC  +   + VLI+GLC+     
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE----- 480

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                        +G+L +A  +   M   G + +    +S+++G   A  +E  + LF 
Sbjct: 481 -------------DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527

Query: 423 EM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           EM        P VV+YN L+  LCK      A   +  ML++G  PD+IT ++ +N L +
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 587

Query: 481 S---------------------KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
                                 ++I  A K+    LQK   P+ + +  +I  LC   KV
Sbjct: 588 KLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 647

Query: 520 E 520
           +
Sbjct: 648 Q 648



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 42/388 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + +KA   L+ +      P+  +YGT+INGLVK G  +  + +   + ERG   N
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+ LI G FK+     A  +W+++V E    PN+V Y+ +I+GLC+ G+ DE  E+ 
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMV-EKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       ++FTY S I G  K GN + A RV++EM ++    + + Y+ +I G C  
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADST 346
           GK++E   +W  ++GR    +VV+Y+ +I GL   G V+  + ++   L +E +   D  
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 541

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +L+  LCK   ++ AI +LN              S+++R    GC  +  TCN  +N
Sbjct: 542 TYNILLRALCKQNSISHAIDLLN--------------SMLDR----GCNPDLITCNIFLN 583

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVS---YNTLINGLCKVERFGEAYSFVKEMLEKG 463
                              R+  +P        + L+  L K +R   A   ++ ML+K 
Sbjct: 584 AL-----------------REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKF 626

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLC 491
             P+  T+  +I  LC+ KK+   +  C
Sbjct: 627 LPPNASTWERIIPELCKPKKVQAIIDKC 654


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/591 (27%), Positives = 315/591 (53%), Gaps = 28/591 (4%)

Query: 41  FHHILRRLIDPKLVVHVSRILEL-IEIQKCYCPEDVALS--VIQAYGKNSMPDKALDVFQ 97
           ++ +L+ L D +       +L + ++ Q   C  DV     VI  +      DKA  +F 
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL 217

Query: 98  RMNE-----IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
            M        +      LC+ ++ ++A+     + EKG+KP+  +Y T+I+GL K+ ++ 
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  VF +M ++GV+ + V YN +IDG  K     RA+ ++++++ +  V P+ VTYN +
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI-DRGVKPDHVTYNTI 336

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I+GLCK    D+   ++ +M     + D+ TY   I GLCKA +V+ AE V+++M++ G+
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
             +  TYN +I G+   G+ +E  + + E+       +V +Y +L+  L +NGK +EA S
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +++ +  K      T +G++++G                   G +G L++   L+N M  
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGY------------------GKKGALSEMHDLLNLMVA 498

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G   N    N+++  + + + ++  + +F +M ++G SP VV+Y TLI+ LCK+ R  +
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     +M+ +G  P+ + ++ L+ GLC   K +   +L  + L +G  PD+  +N ++ 
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLC 618

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G+V +A +L  +M      P++++YNTL+DG       D+A+++ + ++   L+P
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKP 678

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +I+SYN  L G C   R+ +A+    + L +G+ P   T++ ++  +  +G
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 241/492 (48%), Gaps = 33/492 (6%)

Query: 144 GLVKSGDL--LGALAVFDEMFERGVETNVVCYNILIDGFFK---KGDYMRAKEIWERLVM 198
           G  +SG+L    AL +FDE+       +V   N L+    +         A   + R++ 
Sbjct: 15  GRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLR 74

Query: 199 ETS--VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + S  V P+  TY+++I   C+ GR +     +  + K     D       + GLC    
Sbjct: 75  DCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKR 134

Query: 257 V-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCL--NVV 311
           V E    + R+M E G  +  V+YN ++ G C   + +E  EL  +M  G+      +VV
Sbjct: 135 VGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVV 194

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SYNI+I G    G+VD+A   + L  E   + D  T+  +I+GLCK   +++A  +  ++
Sbjct: 195 SYNIVINGFFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
            E                   G K N  T N++++G  +A +++ A  +F++M  KG  P
Sbjct: 252 VE------------------KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKP 293

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           + V+YNT+I+GLCK +    A    ++M+++G KPD +TY+ +I+GLC+++ ID A  + 
Sbjct: 294 SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVF 353

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            Q + KG  PD   Y I+I GLC A  V+ A  ++  M  +   PN  TYN L+ G   T
Sbjct: 354 QQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLST 413

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  ++ ++    +    L PD+ +Y + L  LC   + ++A    +  + +GI P+   +
Sbjct: 414 GQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIY 473

Query: 612 HILVRAVMNNGA 623
            I++      GA
Sbjct: 474 GIMLHGYGKKGA 485



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 265/588 (45%), Gaps = 98/588 (16%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           ++K   P +V   ++I    K    D A  VFQ+M        N  +      LC+ +  
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A+     + ++G+KPD  +Y T+I+GL K+  +  A  VF +M ++GV+ + + Y I+
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           IDG  K     RA+ ++++++ +  V PN  TYN +I+G    G+++E ++    M  ++
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMI-DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            E D FTY   +  LCK G    A  ++  M+  GI      Y  M+ G+ + G + E  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 297 ELWEVMGRKG------------------------------------CLNVVSYNILIRGL 320
           +L  +M   G                                      NVV+Y  LI  L
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G+VD+A+  +  +  +    ++     L+ GLC      K  ++  E+   G     
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 376 ------------EGRLADAASLVNRM----------------DKH--------------- 392
                       EGR+ +A  L++ M                D H               
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 393 ----GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
               G K N  + N+L++G+ +A +++NA  LF+EM RKG +P V +YNT++NGL +  R
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           F EA      M++      + TYS++++G C++   D A K+           D+  +NI
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +I GL   G+ EDA+ L++ +     VP++VTY  + + L + G  ++
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 252/573 (43%), Gaps = 88/573 (15%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PD  +Y  VI    + G L    A F  + + G   + +  N L+ G         A 
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK----------- 239
            +  R + E      VV+YN ++ GLC   R +E  E+   M   +              
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 240 ------------------------DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
                                   D  TY + I GLCKA  V+ AE V+++MVE G+  +
Sbjct: 200 INGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
            VTYN +IDG C+A ++     +++ M  KG   + V+YN +I GL +   VD A  +++
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQ 319

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGR 378
            + ++    D  T+  +I+GLCK   ++KA  +  ++ + G                + +
Sbjct: 320 QMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQ 379

Query: 379 LAD-AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
             D A  +  +M   G K N  T N L++G++   + E  +   KEMS     P V +Y 
Sbjct: 380 SVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING-------------------- 477
            L++ LCK  +  EA S    M+ KG KP +  Y ++++G                    
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499

Query: 478 ------------LCQSKK---IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
                       +C   K   ID  + +  +  Q+G +P+V  Y  LI  LC  G+V+DA
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  ++ M      PN V +N+L+ GL      +K  E++  +L + +RPDI+ +N  L  
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           LC   R+ +A   ++  +C G+ P  I+++ L+
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLI 652



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 228/504 (45%), Gaps = 48/504 (9%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           LL+ L      + A +LFDS  R+ G   S  ++  +L        +  +  +L L+   
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRK-GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
                  +  +VI AY K +M D+ + +F +M +                          
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQ-------------------------- 533

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            +GL P+V +YGT+I+ L K G +  A+  F++M   GV  N V +N L+ G      + 
Sbjct: 534 -QGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWE 592

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           + +E++  + +   + P++V +N ++  LCK GR  E   + D M     + D  +Y + 
Sbjct: 593 KVEELFLEM-LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G C A  ++ A ++   MV +G+  + V+YN ++ G+C+AG+I   + L+  M RKG 
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
              V +YN ++ GL  +G+  EA  ++  + +        T+ ++++G CKN   ++A +
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFK 771

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           I   +                 MD    +L+  T N +++G  +  + E+A+ LF  +  
Sbjct: 772 IFQSL---------------CSMD---LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPA 813

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P+VV+Y  +   L +     E       M + G  P+    + LI  L    +I  
Sbjct: 814 NGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPR 873

Query: 487 ALKLCCQFLQKGFTPDVTMYNILI 510
           A     +  +K F+ + +  ++LI
Sbjct: 874 AGAYLSKLDEKNFSLEASTTSMLI 897



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 135/255 (52%), Gaps = 2/255 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKP++ SY T+++G  K+G +  A  +F EM  +GV   V
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +++G F+ G +  A+E++  ++    ++ ++ TY+++++G CK   FDE  +++ 
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLW-SICTYSIILDGFCKNNCFDEAFKIFQ 774

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +   + + D  T+   I GL K G  E A  ++  +  +G+    VTY  + +     G
Sbjct: 775 SLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E   L+ VM + G   N    N LIR LL+ G++  A +    L EKN + +++T  
Sbjct: 835 SLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTS 894

Query: 350 VLINGLCKNGYLNKA 364
           +LI+   +  Y   A
Sbjct: 895 MLISLFSREEYQQHA 909


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 163/443 (36%), Positives = 252/443 (56%), Gaps = 31/443 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +   A+     + + G  PDV +Y T+++G  K G+L  AL +FD   +RG   +
Sbjct: 20  LCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPD 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN LI+GF K      A+ I +R+V E  V P+VVTYN ++NGLCK GR DE     
Sbjct: 80  VVTYNALINGFCKADKLDEAQRILQRMVSENLV-PDVVTYNSLVNGLCKNGRVDEA---- 134

Query: 230 DRMKKNER--EKDSFTYCSFIHGLCKA-GNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            RM   ++    +  TY + I GLC+    V  A +++  +++ G   +  TYN +IDG 
Sbjct: 135 -RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGL 193

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            +  ++ E FEL+  + + G   + ++Y + I GL + G+V++A+ + + + EK C  D 
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            +H  +INGLCK                  E R+ +A  L++ M+  GC  NA + N+L+
Sbjct: 254 VSHNAVINGLCK------------------EKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG---EAYSFVKEMLEK 462
            G  +A K + A+  FKEM ++G  PTVV+YN L++GLCK  + G   EA +    M+EK
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD++TYS LI+GL ++ K+D A +L      KG  P+V  YN LI GLC   KV++A
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 523 LQLYSNMKKRNCVPNLVTYNTLM 545
           L+L+  M ++ CVP+ +TY T++
Sbjct: 416 LELFVAMVEKGCVPDTITYGTII 438



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/437 (33%), Positives = 250/437 (57%), Gaps = 25/437 (5%)

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PN +TYN +++GLC  GR  +   +++RM K     D  TY + +HG CK G ++ A +
Sbjct: 7   WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALK 66

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           ++   V+ G   D VTYNA+I+GFC+A K+ E   + + M  +  + +VV+YN L+ GL 
Sbjct: 67  IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN-GYLNKAIQILNEVEEGG----- 375
           +NG+VDEA     L+ +K  + +  T+  LI+GLC+    +++A+++   V + G     
Sbjct: 127 KNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEV 183

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       E R+ +A  L + + KHG + +A T    ++G  +A ++E+A+ + K+
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  KGC P VVS+N +INGLCK +R  EA   +  M  KG  P+ I+++ LI G C++ K
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA---GKVEDALQLYSNMKKRNCVPNLVT 540
              A+    + L++G  P V  YNIL+ GLC A   G++++A+ L+  M ++  VP++VT
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y+ L+DGL K G  D A  +   +  +   P++ +YN  + GLC   ++ +A E     +
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423

Query: 601 CRGILPTTITWHILVRA 617
            +G +P TIT+  ++ A
Sbjct: 424 EKGCVPDTITYGTIISA 440



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/441 (32%), Positives = 253/441 (57%), Gaps = 24/441 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M + G   N + YN L+ G    G    A+ ++ER++ +    P+VVTYN +++G CK G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI-KAGYSPDVVTYNTLLHGFCKVG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE L+++D   K     D  TY + I+G CKA  ++ A+R+ + MV   +  D VTYN
Sbjct: 60  ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGK-VDEAISIWELLREK 339
           ++++G C+ G++ E   L  ++ +    NV++Y+ LI GL    + V EA+ ++  + ++
Sbjct: 120 SLVNGLCKNGRVDEARML--IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               +  T+ +LI+GL K   +N+A ++ + + + G                  GR+ DA
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             ++  MD+ GC  +  + N+++NG  +  +++ A  L   M  KGCSP  +S+NTLI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK---KIDMALKLCCQFLQKGF 499
            C+  ++ +A +  KEML++G KP ++TY++L++GLC+++   +I  A+ L    ++KG 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PDV  Y+ LI GL  AGK++DA +L   M+ + C+PN+ TYN+L+ GL      D+ALE
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 560 IWNHILEERLRPDIISYNITL 580
           ++  ++E+   PD I+Y   +
Sbjct: 418 LFVAMVEKGCVPDTITYGTII 438



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 222/396 (56%), Gaps = 26/396 (6%)

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M+K+    +  TY + + GLC  G +  A+ +Y  M+++G   D VTYN ++ GFC+ G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E  ++++   ++G + +VV+YN LI G  +  K+DEA  I + +  +N   D  T+  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L+NGLCKNG +++A  ++                    +DK G   N  T ++L++G  +
Sbjct: 121 LVNGLCKNGRVDEARMLI--------------------VDK-GFSPNVITYSTLISGLCR 159

Query: 411 ASK-LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
             + +  A+ LF  + ++G  P V +YN LI+GL K +R  EA+     +++ G +PD I
Sbjct: 160 ELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 219

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY++ I+GLC++ +++ AL +     +KG  PDV  +N +I+GLC   +V++A  L S M
Sbjct: 220 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 279

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC--- 586
           + + C PN +++NTL+ G  + G   KA+  +  +L+  ++P +++YNI + GLC     
Sbjct: 280 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 339

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+ +A    +  + +G +P  +T+  L+  +   G
Sbjct: 340 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 228/424 (53%), Gaps = 34/424 (8%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQR------MNEIFGCEAGI--LCRKRQF 116
           I+  Y P+ V   +++  + K    D+AL +F        + ++    A I   C+  + 
Sbjct: 37  IKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKL 96

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A+R L  +  + L PDV +Y +++NGL K+G +  A  +   + ++G   NV+ Y+ L
Sbjct: 97  DEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTL 153

Query: 177 IDGFFKKGDYMRAKEIWERL---VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           I G  ++   +R      +L   V++    P V TYN++I+GL K  R +E  E++  + 
Sbjct: 154 ISGLCRE---LRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           K+  E D+ TY  FI GLCKAG VE A  + ++M E G   D V++NA+I+G C+  ++ 
Sbjct: 211 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 270

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   L   M  KGC  N +S+N LI G    GK  +A++ ++ + ++       T+ +L+
Sbjct: 271 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 330

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLC      KA Q         EGR+ +A +L + M + G   +  T ++L++G  +A 
Sbjct: 331 DGLC------KARQ---------EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           KL++A  L   M  KGC P V +YN+LI+GLC +E+  EA      M+EKG  PD ITY 
Sbjct: 376 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYG 435

Query: 473 LLIN 476
            +I+
Sbjct: 436 TIIS 439



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 190/366 (51%), Gaps = 14/366 (3%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SV 79
           AL +FD A +  G+      ++ ++        +    RIL+ + + +   P+ V   S+
Sbjct: 64  ALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRM-VSENLVPDVVTYNSL 121

Query: 80  IQAYGKNSMPDKA----LDVFQRMNEI-FGCEAGILCRK-RQFEKAKRFLNSLWEKGLKP 133
           +    KN   D+A    +D     N I +      LCR+ R   +A +   S+ ++G +P
Sbjct: 122 VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           +V +Y  +I+GL+K   +  A  +F  + + G+E + + Y + IDG  K G    A  + 
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +  E    P+VV++N +INGLCK  R DE   +   M+      ++ ++ + I G C+
Sbjct: 242 KDM-DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA---GKIKECFELWEVMGRKGCL-N 309
           AG  + A   ++EM++ G+    VTYN ++DG C+A   G+IKE   L++ M  KG + +
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+Y+ LI GL + GK+D+A  +   +  K C  +  T+  LI+GLC    +++A+++  
Sbjct: 361 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFV 420

Query: 370 EVEEGG 375
            + E G
Sbjct: 421 AMVEKG 426


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 184/650 (28%), Positives = 315/650 (48%), Gaps = 37/650 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   +  T++ LF  A  + GY H   +++ ++ +L        +  +L 
Sbjct: 76  ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLM 135

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRK 113
            ++ +     E + + +++ YG+  +P +A  +   M  ++ CE           +L   
Sbjct: 136 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG 195

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              +        +  KG+ P VY++G V+  L    ++  A A+  +M   G   N + Y
Sbjct: 196 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 255

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSV--YPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             LI    K G   R  E+ + L     +   P+V T+N  I+GLCK  R  E  ++ DR
Sbjct: 256 QTLIHALXKVG---RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 312

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       +SFTY   +HGLC+ G V+ A  +  ++    +    V +N +I+G+   G+
Sbjct: 313 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV----VLFNTLINGYVSRGR 368

Query: 292 IKECFE-LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + E    + E M   GC  ++ +YN LI GL + G +  A  +   ++ K C  +  T+ 
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI+  CK G L +A  +L+E+   G                 + ++ DA ++   M   
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 488

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK + +T NSL+ G  + +K E A+ L+++M  +G     ++YNTLI+   +     EA
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V +ML +G   D ITY+ LI  LC++  I+  L L    + KG  P+    NILI+G
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G ++ AL+   +M  R   P++VTYN+L++GL KTG   +AL +++ +  E + PD
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I+YN  +   C      DA   L+  +  G +P  +TW+ILV   +  G
Sbjct: 669 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 228/445 (51%), Gaps = 23/445 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A + ++ +  +G  P+ ++YG +++GL + G +  A  + +++       N
Sbjct: 297 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPN 352

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +N LI+G+  +G    AK +    ++     P++ TYN +I GLCK G      E+ 
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+    E +  TY   I   CK G +E A  V  EM   G+ ++AV YN +I   C+ 
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+++   ++  M  KGC  ++ ++N LI GL +  K +EA+ +++ +  +   A++ T+
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+   + G + +A++                  LVN M   GC L+  T N L+   
Sbjct: 533 NTLIHAFLRRGAMQEALK------------------LVNDMLFRGCPLDDITYNGLIKAL 574

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A  +E  + LF++M  KG +P  +S N LINGLC+      A  F+++M+ +G  PD+
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ LINGLC++ +   AL L  +   +G  PD   YN LI   C  G  +DA  L S 
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 694

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGD 553
                 +PN VT+  L+    K GD
Sbjct: 695 GVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 26/454 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y +LID     G++     +  ++  E  V+   + + +++    + G   +   +   M
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESL-FILIMKHYGRAGLPGQATRLLLDM 172

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +     + +F   + +  +  AGN       V+ EM+  GI     T+  ++   C   +
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +     L + M R GC+ N + Y  LI  L + G+V+E + + E +    C  D  T   
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            I+GLCK                    R+ +AA LV+RM   G   N++T   LM+G  +
Sbjct: 293 AIHGLCK------------------MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE-MLEKGWKPDMI 469
             K++ A  L  ++     +P VV +NTLING     R  EA + + E ML  G  PD+ 
Sbjct: 335 MGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 390

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LI GLC+   +  A +L  +   KG  P+V  Y ILI   C  G++E+A  +   M
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 450

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +    N V YN L+  L K      AL ++  +  +  +PDI ++N  + GLC  ++ 
Sbjct: 451 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 510

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +A     D L  G++  TIT++ L+ A +  GA
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 278/538 (51%), Gaps = 38/538 (7%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P+ VA +V I    +    D+A  V +R     GCE            LC+  + + A +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRA-GCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  + EK   P   +Y  +++GL+K+G L  A+AV ++M E+G    +  Y ++IDG  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE--- 238
           K G    A+ I+  + +     P+   Y  +I GLCK G+ +E   ++      +     
Sbjct: 124 KAGRVEEARRIFVDM-LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 239 -KDSFTYCSFIHGLCKAGNVEGAERVYR-EMVESGIFVDAVTYNAMIDGFCRAGKIKE-C 295
             D  TY S I GLCKAG +  A +V+  E VE G   DAVTY ++IDG C+ G+++E C
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
               E+  R    + V+Y  LI G ++   + +A  ++  + +      + T+ ++++GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G                  R+A+A +    M++ GC     T ++LM+GF     + 
Sbjct: 303 CKAG------------------RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVS 344

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ LF+ M  +GC P +VSYN +I GLC+  +  +AY + +++L++   PD+ T++  +
Sbjct: 345 AAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFL 404

Query: 476 NGLCQS-KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           +GLCQ    +   ++L    + +G +P++  Y+IL+ G+C AG +E AL+++  M  R  
Sbjct: 405 HGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGV 464

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            P++V +NTL+  L   G  D+ALE++   LE R  PD  SY   L GL  C RM +A
Sbjct: 465 APDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEA 521



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 260/512 (50%), Gaps = 26/512 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+++ ++A   L      G +PD  +Y   I+GL K+  +  A  +  +M E+     
Sbjct: 17  LCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPT 76

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  L+DG  K G    A  + E++V E    P + TY V+I+GL K GR +E   ++
Sbjct: 77  TVTYTALVDGLLKAGRLDEAMAVLEQMV-EKGNSPTLKTYTVVIDGLSKAGRVEEARRIF 135

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM----VESGIFVDAVTYNAMIDG 285
             M  N    D+F Y + I GLCK+G  E A  +Y+E       +    D VTY ++IDG
Sbjct: 136 VDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDG 195

Query: 286 FCRAGKIKECFELW--EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            C+AG+I E  +++  E + R    + V+Y  +I GL + G+V+E    +  +R +    
Sbjct: 196 LCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 255

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D+ T+  LI+G  K   + KA ++  +                  M + G  ++  T N 
Sbjct: 256 DAVTYAALIDGFMKAKMIPKAHRVYRQ------------------MLQSGTVVSTVTYNI 297

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G  +A ++  A   F  M  +GC  TVV+Y+ L++G C       A    + ML++G
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA-GKVEDA 522
            +P++++Y+++I GLC++ K+  A     + LQ+   PDV  +N  +HGLC     V D 
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDG 417

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++L+ +M  +   PNL +Y+ LMDG+ + G  + ALEI+  ++   + PD++ +N  ++ 
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           LC   R+ +A E   +   R        W +L
Sbjct: 478 LCIAGRVDEALEVFRELERRSAPDAWSYWSLL 509



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 259/491 (52%), Gaps = 26/491 (5%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD+ ++  VINGL +   L  A +V +     G E + V YN+ IDG  K      A ++
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++  E    P  VTY  +++GL K GR DE + + ++M +        TY   I GL 
Sbjct: 65  LKKM-DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRK----GC 307
           KAG VE A R++ +M+ +G   DA  Y A+I G C++GK +E + L+ E   RK      
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
            +VV+Y  LI GL + G++ EA  +++    E+    D+ T+  +I+GLCK         
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK--------- 234

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
            L  VEEG E          + M   G + +A T  +L++GF++A  +  A  ++++M +
Sbjct: 235 -LGRVEEGCE--------RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G   + V+YN +++GLCK  R  EAY+    M E+G    ++TYS L++G C    +  
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A++L  + L +G  P++  YNI+I GLC AGK+  A   +  + +R   P++ T+N  + 
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405

Query: 547 GLFKTGDC-DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           GL +  D     +E++  ++ +   P++ SY+I + G+C    +  A E   + + RG+ 
Sbjct: 406 GLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465

Query: 606 PTTITWHILVR 616
           P  + ++ L+R
Sbjct: 466 PDVVVFNTLIR 476



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 223/418 (53%), Gaps = 18/418 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++V + V+INGLC+  R DE   + +R  +   E D  TY  FI GLCKA  V+ A ++
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLE 322
            ++M E       VTY A++DG  +AG++ E   + E M  KG    + +Y ++I GL +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+V+EA  I+  +    C  D+  +  LI GLCK+G   +A  +  E            
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE------------ 172

Query: 383 ASLVNRMDKHGCKL-NAYTCNSLMNGFIQASKLENAIFLF-KEMSRKGCSPTVVSYNTLI 440
               N    H   + +  T  SL++G  +A ++  A  +F  E   +G  P  V+Y ++I
Sbjct: 173 ---ANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSII 229

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLCK+ R  E      EM  +G++PD +TY+ LI+G  ++K I  A ++  Q LQ G  
Sbjct: 230 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                YNI++ GLC AG+V +A   +  M++R CV  +VTY+ LMDG    G+   A+E+
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +  +L+    P+++SYNI ++GLC   +++ A+ +    L R + P   T++  +  +
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 236/461 (51%), Gaps = 24/461 (5%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++V + ++I+G  ++     A  + ER V      P+ VTYNV I+GLCK  R D+  ++
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAV-RAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             +M + +    + TY + + GL KAG ++ A  V  +MVE G      TY  +IDG  +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA---- 343
           AG+++E   ++  M   GC  +   Y  LI+GL ++GK +EA ++++    +  +A    
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  LI+GLCK G + +A Q+ ++ E    G + DA                 T  S
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDD-EAVERGFIPDAV----------------TYTS 227

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G  +  ++E     F EM  +G  P  V+Y  LI+G  K +   +A+   ++ML+ G
Sbjct: 228 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                +TY+++++GLC++ ++  A        ++G    V  Y+ L+ G CS G V  A+
Sbjct: 288 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+  M  R C PNLV+YN ++ GL + G   KA   +  +L+ RL PD+ ++N  L GL
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407

Query: 584 CS-CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C     +SD  E     + +G  P   ++ IL+  +   G 
Sbjct: 408 CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 152/285 (53%), Gaps = 23/285 (8%)

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C+ D     V+INGLC+                  E RL +A S++ R  + GC+ +  T
Sbjct: 3   CSPDMVAFTVVINGLCR------------------EKRLDEAFSVLERAVRAGCEPDYVT 44

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N  ++G  +A ++++A  L K+M  K C PT V+Y  L++GL K  R  EA + +++M+
Sbjct: 45  YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMV 104

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           EKG  P + TY+++I+GL ++ +++ A ++    L  G  PD  +Y  LI GLC +GK E
Sbjct: 105 EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPE 164

Query: 521 DALQLYSNMKKR----NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIIS 575
           +A  LY     R      VP++VTY +L+DGL K G   +A ++++    ER   PD ++
Sbjct: 165 EAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVT 224

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           Y   + GLC   R+ +  E  ++   RG  P  +T+  L+   M 
Sbjct: 225 YTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 269



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 110/198 (55%), Gaps = 4/198 (2%)

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           CSP +V++  +INGLC+ +R  EA+S ++  +  G +PD +TY++ I+GLC+++++D A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  +  +K   P    Y  L+ GL  AG++++A+ +   M ++   P L TY  ++DGL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR----GI 604
            K G  ++A  I+  +L    RPD   Y   +KGLC   +  +A+    +A  R      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 605 LPTTITWHILVRAVMNNG 622
           +P  +T+  L+  +   G
Sbjct: 183 VPDVVTYTSLIDGLCKAG 200


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 181/637 (28%), Positives = 314/637 (49%), Gaps = 41/637 (6%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           S  +LL+ L+++ +   AL LF+ A+++P ++  P L+  IL RL        + +ILE 
Sbjct: 49  SDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILED 108

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKR--------- 114
           ++   C       L +I++Y +  + D+ L V   M + FG +       R         
Sbjct: 109 MKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGN 168

Query: 115 -----QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
                +   AK    S+W  G+KPDV ++  +I  L ++  L  A+ + ++M   G+  +
Sbjct: 169 NLKLVEIAHAKM---SVW--GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +  ++ G+ ++GD   A  I E++V     + NV + NV+++G CK GR ++ L   
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFI 282

Query: 230 DRMKKNERE-KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             M   +    D +T+ + ++GLCKAG+V+ A  +   M++ G   D  TYN++I G C+
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++KE  E  + M  + C  N V+YN LI  L +  +V+EA  +  +L  K    D  T
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              LI GLC       A+++  E                  M   GC+ + +T N L++ 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEE------------------MRSKGCEPDEFTYNMLIDS 444

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                KL+ A+ + K+M   GC+ +V++YNTLI+G CK  +  EA     EM   G   +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +TY+ LI+GLC+S++++ A +L  Q + +G  PD   YN L+   C  G ++ A  +  
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C P++VTY TL+ GL K G  + A ++   I  + +     +YN  ++GL    
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKR 624

Query: 588 RMSDAFEFLNDALCRG-ILPTTITWHILVRAVMNNGA 623
           + ++A     + L +    P  +++ I+ R + N G 
Sbjct: 625 KTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGG 661



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 226/476 (47%), Gaps = 36/476 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++  + K    + AL+  Q M+           F      LC+    + A   ++ + ++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PDVY+Y +VI+GL K G++  A+   D+M  R    N V YN LI    K+     A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E+  R++    + P+V T+N +I GLC        +E+++ M+    E D FTY   I 
Sbjct: 385 TELA-RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
            LC  G ++ A  + ++M  SG     +TYN +IDGFC+A KI+E  E+++ M   G   
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSR 503

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N V+YN LI GL ++ +V++A  + + +  +    D  T+  L+   C+ G + KA  I+
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV 563

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             +   G                  GR+  A+ L+  +   G  L  +  N ++ G  + 
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRK 623

Query: 412 SKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVE-RFGEAYSFVKEMLEKGWKPDMI 469
            K   AI LF+EM  +   +P  VSY  +  GLC       EA  F+ E+LEKG+ P+  
Sbjct: 624 RKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKG-FT-PDVTMYNILIHGLCSAGKVEDAL 523
           +  +L  GL      +  +KL    +QK  F+  +V+M    + GL    K +DAL
Sbjct: 684 SLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSM----VKGLLKIRKFQDAL 735


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 269/508 (52%), Gaps = 23/508 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  +FL  +  +G  PDV +  ++I G  +SG    A  + + +   G   +
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN+LI G+ K G+  +A E+ ER+    SV P+VVTYN ++  LC  G+  E +E+ 
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM----SVAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  + E   D  TY   I   C    V  A ++  EM + G   D VTYN +I+G C+ 
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K C+    T 
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+   L +AI +L                   +M KHGC  N+ + N L++GF
Sbjct: 352 NILINFLCRKRLLGRAIDVLE------------------KMPKHGCVPNSLSYNPLLHGF 393

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            Q  K++ AI   + M  +GC P +V+YNTL+  LCK  +   A   + ++  KG  P +
Sbjct: 394 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVL 453

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL +  K + A++L  +  +KG  PD+  Y+ L+ GL   GKV++A++++ +
Sbjct: 454 ITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD 513

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+  +  P+ VTYN +M GL K     +A++   +++E+  +P   +Y I ++G+     
Sbjct: 514 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGL 573

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVR 616
             +A E LN+   RG +  +    ++V+
Sbjct: 574 AEEALELLNELCSRGFVKKSSAEQVVVK 601



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 250/465 (53%), Gaps = 22/465 (4%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           NI +    + G+     +  ER++ +  + P+V+    +I G C+ G+  +   + + ++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILE 168

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            +    D  TY   I G CK+G ++ A  V   M    +  D VTYN ++   C +GK+K
Sbjct: 169 NSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLK 225

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  E+ +   ++ C  +V++Y ILI     +  V +A+ + + +R+K C  D  T+ VLI
Sbjct: 226 EAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 285

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           NG+CK G L++AI+ LN +   G                  GR  DA  L++ M + GC 
Sbjct: 286 NGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T N L+N   +   L  AI + ++M + GC P  +SYN L++G C+ ++   A  +
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           ++ M+ +G  PD++TY+ L+  LC+  K+D A+++  Q   KG +P +  YN +I GL  
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK E A++L   M+++   P+++TY+TL+ GL + G  D+A++I++ +    ++P  ++
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           YN  + GLC   + S A +FL   + +G  PT  T+ IL+  + +
Sbjct: 526 YNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 219/424 (51%), Gaps = 52/424 (12%)

Query: 244 YCSFIH--GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           + S IH   L + G +E   +    M+  G   D +   ++I GFCR+GK K+   + E+
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 302 MGRKGCL---------------------------------NVVSYNILIRGLLENGKVDE 328
           +   G +                                 +VV+YN ++R L ++GK+ E
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A+ + +   ++ C  D  T+ +LI   C +  + +A+++L+E+ + G             
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EGRL +A   +N M  +GCK N  T N ++       +  +A  L  +M RKGCSP
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           +VV++N LIN LC+    G A   +++M + G  P+ ++Y+ L++G CQ KK+D A++  
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              + +G  PD+  YN L+  LC  GKV+ A+++ + +  + C P L+TYNT++DGL K 
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A+E+   +  + L+PDII+Y+  L+GL    ++ +A +  +D     I P+ +T+
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526

Query: 612 HILV 615
           + ++
Sbjct: 527 NAIM 530



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 223/458 (48%), Gaps = 52/458 (11%)

Query: 58  SRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           +RI+E++E      P+ +  +V I  Y K+   DKAL+V +RM+                
Sbjct: 161 TRIMEILE-NSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---------------- 203

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
                         + PDV +Y T++  L  SG L  A+ V D   +R    +V+ Y IL
Sbjct: 204 --------------VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTIL 249

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+         +A ++ + +  +    P+VVTYNV+ING+CK GR DE ++  + M    
Sbjct: 250 IEATCNDSGVGQAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 308

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + +  T+   +  +C  G    AER+  +M+  G     VT+N +I+  CR   +    
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           ++ E M + GC+ N +SYN L+ G  +  K+D AI   E++  + C  D  T+  L+  L
Sbjct: 369 DVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK+G ++ A++ILN+                  +   GC     T N++++G  +  K E
Sbjct: 429 CKDGKVDAAVEILNQ------------------LSSKGCSPVLITYNTVIDGLTKVGKTE 470

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L +EM RKG  P +++Y+TL+ GL +  +  EA     +M     KP  +TY+ ++
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            GLC++++   A+      ++KG  P    Y ILI G+
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 127/224 (56%), Gaps = 3/224 (1%)

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +  N  +   ++  +LE  +   + M  +G  P V++  +LI G C+  +  +A   ++ 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           +   G  PD+ITY++LI G C+S +ID AL++     +    PDV  YN ++  LC +GK
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGK 223

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +++A+++     +R C P+++TY  L++         +A+++ + + ++  +PD+++YN+
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G+C   R+ +A +FLN+    G  P  IT +I++R++ + G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 264/508 (51%), Gaps = 28/508 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q ++A   L+   E    PD+ ++  VINGL +   L  A +V +     G E +
Sbjct: 19  LCKTGQLDRAMLLLD---EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPD 75

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+ IDG  K      A ++ +++  E    P  VTY  +++GL K GR DE + + 
Sbjct: 76  YVTYNVFIDGLCKAERVDDAFQLLKKM-DEKKCLPTTVTYTALVDGLLKAGRLDEAMAIL 134

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M +        TY   I GL KAG VE A R++ +M+ +G   DA  Y A+I G  + 
Sbjct: 135 EQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKI 194

Query: 290 GKIKECFELWEVMGRKGCL-----NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           GK+ E       M   GC      +VV +N++IR L  +G +++A++ ++ L + + +  
Sbjct: 195 GKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLT 253

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   L+  LCK                    R  +A + V +M +  C    +T  SL
Sbjct: 254 HFTFNPLVAALCK------------------AERTEEAIAFVKKMSERRCFPTLFTYTSL 295

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++GF++  +L+ A+   KE   +G  P  V+Y ++I+GLCK+ R  E      EM  +G+
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 355

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +PD +TY+ LI+G  ++K I  A ++  Q LQ G       YNI++ GLC AG+V +A  
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
            +  M++R CV  +VTY+ LMDG    G+   A+E++  +L+    P+++SYNI ++GLC
Sbjct: 416 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 475

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWH 612
              +++ A+ +    L R + P   T++
Sbjct: 476 RAGKLAKAYFYFEKLLQRRLCPDVYTFN 503



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 299/602 (49%), Gaps = 42/602 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATR---EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
           ++N L  EK    A ++ + A R   EP Y      ++  +  L   + V    ++L+ +
Sbjct: 47  VINGLCREKRLDEAFSVLERAVRAGCEPDYVT----YNVFIDGLCKAERVDDAFQLLKKM 102

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQF 116
           + +KC        +++    K    D+A+ + ++M E         +      L +  + 
Sbjct: 103 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE----RGVETNVVC 172
           E+A+R    +   G +PD + Y  +I+GL K G L  AL   ++M E    RGVE +VV 
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVI 222

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N++I      G+   A   ++ L  + S+     T+N ++  LCK  R +E +    +M
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDEL--DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +       FTY S + G  K G ++ A    +E VE G   DAVTY ++IDG C+ G++
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340

Query: 293 KE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E C    E+  R    + V+Y  LI G ++   + +A  ++  + +      + T+ ++
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++GLCK                   GR+A+A +    M++ GC     T ++LM+GF   
Sbjct: 401 LDGLCK------------------AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 442

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A+ LF+ M  +GC P +VSYN +I GLC+  +  +AY + +++L++   PD+ T+
Sbjct: 443 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 502

Query: 472 SLLINGLCQS-KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           +  ++GLCQ    +   ++L    + +G +P++  Y+IL+ G+C AG +E  L+++  M 
Sbjct: 503 NSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMV 562

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R   P++V +NTL+  L   G  D+ALE++   LE R  PD  SY   L  L  C RM 
Sbjct: 563 SRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDALSRCERME 621

Query: 591 DA 592
           +A
Sbjct: 622 EA 623



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 301/614 (49%), Gaps = 47/614 (7%)

Query: 44  ILRRLIDPKLVV----------HVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKA 92
           I R+L+D ++             + R + L++   C  P+ VA +V I    +    D+A
Sbjct: 2   IDRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPC-SPDMVAFTVVINGLCREKRLDEA 60

Query: 93  LDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
             V +R     GCE            LC+  + + A + L  + EK   P   +Y  +++
Sbjct: 61  FSVLERAVRA-GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           GL+K+G L  A+A+ ++M E+G    +  Y ++IDG  K G    A+ I+  + +     
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM-LGNGCR 178

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE----REKDSFTYCSFIHGLCKAGNVEG 259
           P+   Y  +I+GL K G+ DE L   ++M +N      E D   +   I  LC +GN+E 
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A   + E+ +S + +   T+N ++   C+A + +E     + M  + C   + +Y  L+ 
Sbjct: 239 ALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EG 377
           G L+ G++DEA+   +   E+    D+ T+  +I+GLCK G + +  +  +E+   G E 
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357

Query: 378 RLADAASLVN----------------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                A+L++                +M + G  ++  T N +++G  +A ++  A   F
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M  +GC  TVV+Y+ L++G C       A    + ML++G +P++++Y+++I GLC++
Sbjct: 418 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 477

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA-GKVEDALQLYSNMKKRNCVPNLVT 540
            K+  A     + LQ+   PDV  +N  +HGLC     V D ++L+ +M  +   PNL +
Sbjct: 478 GKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHS 537

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y+ LMDG+ + G  +  LEI++ ++   + PD++ +N  ++ LC   R+ +A E   +  
Sbjct: 538 YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 597

Query: 601 CRGILPTTITWHIL 614
            R        W +L
Sbjct: 598 RRSAPDAWSYWSLL 611


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 253/483 (52%), Gaps = 19/483 (3%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M ER V  +   Y ILIDG  K G    A+ ++++L + + V P+ V Y  +I+GLC   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSGVTPSTVAYTSLIHGLCMAN 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FD+  E++  M +        TY   I   CK G +E A  + ++M+E G   D VTYN
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++DG C++ +++E   L+  M R GC  N  S+N +I GL +  K+D+A  ++  +  K
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
           +   DS ++G+LI+GL K G LN+A ++   + + G                    L +A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L   M   GC+ + +T N L++   +  KL+ A  L K M+  G  P VV+Y+TLI+G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC + R  +A   +++M+++  KP ++T + LI+GLC++ +I  A ++    +  G +PD
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YN L+HG C AG+ E A +L S+M  R   PN+VTY  L+ GL K     +A  ++ 
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +      P++ +Y   + G CS  ++    +   + +C GI P  + +  L   +  +G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 623 AST 625
            S 
Sbjct: 480 RSA 482



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 261/491 (53%), Gaps = 20/491 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  +   A+     L   G+ P   +Y ++I+GL  +     A  +F +M  RG   +
Sbjct: 20  LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN++ID   K+G    A ++ ++++ +  V P+VVTYN +++GLCK  R +E L ++
Sbjct: 80  PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLLF 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M++     +  ++ + I GLC+   ++ A +V+ EM    I  D+ +Y  +IDG  +A
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E ++L++ M   G   + V+YN++I G+     +DEA+ +++ +R K C     T 
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+  CK G L++A ++L                   RM   G   +  T ++L++G 
Sbjct: 259 NILIDAHCKRGKLDEAFRLLK------------------RMTDDGHVPDVVTYSTLISGL 300

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              +++++A  L ++M ++ C PTVV+ NTLI+GLCK  R  EA   +  M+  G  PD+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ L++G C++ + + A +L    + +G  P+V  Y  L+ GLC A ++ +A  +++ 
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           MK   C PNL TY  L+ G    G  D  L+++  ++   + PD + Y      LC   R
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 589 MSDAFEFLNDA 599
            + A E L + 
Sbjct: 481 SARALEILREG 491



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 246/524 (46%), Gaps = 67/524 (12%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D A ++F  MN   GC    +         C++   E+A   +  + E G  PDV +Y T
Sbjct: 62  DDARELFADMNR-RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           V++GL KS  +  AL +F+EM   G   N   +N +I G  ++    +A +++  +  + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK- 179

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+  +Y ++I+GL K G+ +E  +++ RM  +     + TY   IHG+C A  ++ A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
             +++ M   G      T+N +ID  C+ GK+ E F L + M   G + +VV+Y+ LI G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L    +VD+A  + E + ++ C     T   LI+GLCK G + +A ++L+ +   G+   
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ--- 356

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                            +  T N+L++G  +A + E A  L  +M  +G +P VV+Y  L
Sbjct: 357 ---------------SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++GLCK  R  EA     +M   G  P++ TY+ LI G C + ++D  LKL  + +  G 
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461

Query: 500 TPDVTMYNIL-------------------------------------IHGLCSAGKVEDA 522
           +PD  +Y  L                                     + GL  AGK+E A
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 521

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           L    +M +   +P      +L+ GL K+G   +A  +   I++
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 219/486 (45%), Gaps = 89/486 (18%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ 115
           I+  + P+ V   +V+    K+S  ++AL +F  M E  GC             LC++ +
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSK 165

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN- 174
            ++A +  + +  K + PD +SYG +I+GL K+G L  A  +F  M + G+  + V YN 
Sbjct: 166 IDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225

Query: 175 ----------------------------------ILIDGFFKKGDYMRAKEIWERLVMET 200
                                             ILID   K+G    A  + +R+  + 
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V P+VVTY+ +I+GLC   R D+   + + M K + +    T  + IHGLCKAG ++ A
Sbjct: 286 HV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
             V   MV SG   D VTYN ++ G CRAG+ +   EL   M  +G   NVV+Y  L+ G
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L +  ++ EA  ++  ++   C  +  T+  LI G C  G ++  +++  E+   G    
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAY---TCNSLMNGFIQASKLENAIF 419
                         GR A A  ++ R  +   +  A+        ++G ++A K+E A+ 
Sbjct: 465 HVVYGTLAAELCKSGRSARALEIL-REGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG 523

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS--------------------FVKEM 459
             ++M R G  P      +L+ GLCK  + GEA +                    FV+EM
Sbjct: 524 FVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEM 583

Query: 460 LEKGWK 465
           + KG++
Sbjct: 584 VGKGYE 589


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 260/497 (52%), Gaps = 23/497 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  +FL ++   G  PD+    T+I G  + G    A  + + +   G   +
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN++I G+ K G+   A  + +R+    SV P+VVTYN ++  LC  G+  + +E+ 
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM + +   D  TY   I   C+   V  A ++  EM + G   D VTYN +++G C+ 
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K  +    T 
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L +AI IL                   +M KHGC+ N+ + N L++GF
Sbjct: 348 NILINFLCRKGLLGRAIDILE------------------KMPKHGCQPNSLSYNPLLHGF 389

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ AI   + M  +GC P +V+YNT++  LCK  +  +A   + ++  KG  P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL ++ K   A+KL  +   K   PD   Y+ L+ GL   GKV++A++ +  
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            ++    PN VT+N++M GL KT   D+A++   +++    +P   SY I ++GL     
Sbjct: 510 FERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGM 569

Query: 589 MSDAFEFLNDALCRGIL 605
             +A E LN+   +G++
Sbjct: 570 AKEALELLNELCNKGLM 586



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 274/541 (50%), Gaps = 34/541 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +IQ + +       LDV  R       +  +  RKR         + +   GL      +
Sbjct: 16  LIQQFHRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLVLVSAASQVESSGLNGRAQKF 75

Query: 139 GTVINGLVKS---GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            T+ +G   S   G    A + F       VE+N     ++  G  ++G      +  E 
Sbjct: 76  DTLASGHSNSNGNGHFSSANSSF---VLEDVESNNHLRQLVRTGELEEG-----FKFLEN 127

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +V   +V P+++    +I G C+ G+  +  ++ + ++ +    D  TY   I G CKAG
Sbjct: 128 MVYHGNV-PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG 186

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            +  A  V   M    +  D VTYN ++   C +GK+K+  E+ + M ++ C  +V++Y 
Sbjct: 187 EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ILI     +  V +A+ + + +R++ C  D  T+ VL+NG+CK G L++AI+ LN+    
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND---- 299

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                         M   GC+ N  T N ++       +  +A  L  +M RKG SP+VV
Sbjct: 300 --------------MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           ++N LIN LC+    G A   +++M + G +P+ ++Y+ L++G C+ KK+D A++   + 
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + +G  PD+  YN ++  LC  GKVEDA+++ + +  + C P L+TYNT++DGL K G  
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KA+++ + +  + L+PD I+Y+  + GL    ++ +A +F ++    G+ P  +T++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 615 V 615
           +
Sbjct: 526 M 526



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 20/416 (4%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V  N  +  L + G  +E  +  + M  +    D     + I G C+ G    A ++   
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           +  SG   D +TYN MI G+C+AG+I     + + M      +VV+YN ++R L ++GK+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKL 220

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A+ + + + +++C  D  T+ +LI   C++  + +A+++L+E                
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDE---------------- 264

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   GC  +  T N L+NG  +  +L+ AI    +M   GC P V+++N ++  +C  
Sbjct: 265 --MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R+ +A   + +ML KG+ P ++T+++LIN LC+   +  A+ +  +  + G  P+   Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N L+HG C   K++ A++    M  R C P++VTYNT++  L K G  + A+EI N +  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +   P +I+YN  + GL    +   A + L++   + + P TIT+  LV  +   G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 198/378 (52%), Gaps = 22/378 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  L + G +E   +    MV  G   D +    +I GFCR GK ++  ++ EV+   G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + +V++YN++I G  + G+++ A+S+ + +   + + D  T+  ++  LC +G L +A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L+                  RM +  C  +  T   L+    + S +  A+ L  EM  
Sbjct: 226 VLD------------------RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRD 267

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +GC+P VV+YN L+NG+CK  R  EA  F+ +M   G +P++IT+++++  +C + +   
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A KL    L+KGF+P V  +NILI+ LC  G +  A+ +   M K  C PN ++YN L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  K    D+A+E    ++     PDI++YN  L  LC   ++ DA E LN    +G  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 607 TTITWHILVRAVMNNGAS 624
             IT++ ++  +   G +
Sbjct: 448 VLITYNTVIDGLAKAGKT 465



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 214/446 (47%), Gaps = 51/446 (11%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           + AL++ D  +  P        ++ ILR L D   +     +L+ +  + CY P+ +  +
Sbjct: 189 NNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYT 243

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           ++                         EA   CR     +A + L+ + ++G  PDV +Y
Sbjct: 244 IL------------------------IEA--TCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             ++NG+ K G L  A+   ++M   G + NV+ +NI++      G +M A+++   + +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-L 336

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                P+VVT+N++IN LC+ G     +++ ++M K+  + +S +Y   +HG CK   ++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILI 317
            A      MV  G + D VTYN M+   C+ GK+++  E+   +  KGC  V ++YN +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL + GK  +AI + + +R K+   D+ T+  L+ GL + G +++AI+  +E E     
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE----- 511

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                        + G + NA T NS+M G  +  + + AI     M  +GC PT  SY 
Sbjct: 512 -------------RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYT 558

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKG 463
            LI GL       EA   + E+  KG
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKG 584


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 302/648 (46%), Gaps = 33/648 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+NLL AEKN     A+ +   +  G A +   F+ ++R     +         E+++ +
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLK-AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRK 183

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEK 118
           +C       L ++    K  M +KA +VF  M           +       L + ++ ++
Sbjct: 184 RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKE 243

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     + + G  PD  +Y T+I+GL K+G    AL V D M  +      V Y IL++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G   RA+E++ R++  +   PN V Y  +I+G  K GR  E   ++D M +    
Sbjct: 304 SLCKAGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYR 362

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  T+   I GLCK+GN E A + + EM+  G   + VTY  +I G  + G++   F +
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI 422

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   GC  + V+Y  L+ G  + G++DEA  + + L + + + +   +  L+ GLC 
Sbjct: 423 MKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCD 482

Query: 358 NGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNAY 399
            G +   +  L E  +                     GRL +A  +  RM   GCK +A 
Sbjct: 483 GGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542

Query: 400 TCNSLMNGFIQA--SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           T N L+NG  ++  +++E A  L  ++   G  P  V+Y  L  GLCK+     A   ++
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           E   +GW  D++ Y+ L  GLC   ++D A+ L  + +++G  PD   Y  +I+GL    
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGK 662

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISY 576
           K+EDA + +  M  +   P + TY  L+  L   G+ D+A   +  +L    L   ++ Y
Sbjct: 663 KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIY 722

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +  + G C   ++  A +   D + RG +PT +T   L   ++ +G +
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/649 (25%), Positives = 296/649 (45%), Gaps = 69/649 (10%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMP 89
           R  G + S H   ++L  +    L  HV+ +L  +++         A+S  +  G+ +  
Sbjct: 62  RLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVT------GTAISFFRWAGEQAG- 114

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
                 FQ     + C   +L  ++ + +       + + G+ P+ +S+  +I    ++ 
Sbjct: 115 ------FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
               A+  F+ M  +  + ++  + IL+D   K G   +A E++  ++    V P+   +
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             M+  L K  R  E  E++ +M+K     D+  Y + I GL KAG+ + A +V   M+ 
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
                  VTY  +++  C+AG ++   EL+ VM   G   N V Y  LI G  ++G++ E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A S+++ + E     D  TH V+I+GLCK+G   +A +   E+  GG             
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR+A+A  ++  M  HGC  ++ T   L++GF +  +L+ A  L  E+ +   SP
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 432 TVVSYNTLIN------------------------------------GLCKVERFGEAYSF 455
            +  Y++L+                                     GLCK  R  EA   
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRI 528

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSK--KIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            + M+ +G KPD  TY++LINGLC+S+  +++ A  L       G+ PD   Y  L  GL
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGL 588

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G+V+ A+++      R    ++V Y  L  GL   G  D+A+ ++  ++ +   PD 
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +Y   + GL    ++ DA +F ++ + +G  PT  T+  LV+A+ + G
Sbjct: 649 AAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 19/374 (5%)

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVD 327
           ++G   D  TYN +++         +C+ + E M + G   N  S+NILIR      + D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           +A++ +E+++ K C  D  T  +L++ LCK G   KA ++ +E+   G            
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   R+ +A  +  +M+K G   +A   N++++G  +A   + A+ +   M  K C
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            PT V+Y  L+N LCK      A    + M   G++P+ + Y+ LI+G  +S ++  A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + ++ G+ PDV  + ++I GLC +G  E A + +  M +  C PN+VTY T++ GL 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G    A  I   ++     PD ++Y   L G C   R+ +A + L++       P   
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 610 TWHILVRAVMNNGA 623
            +  LV+ + + G+
Sbjct: 472 LYSSLVKGLCDGGS 485



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 196/482 (40%), Gaps = 103/482 (21%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  + K+    +A  +F  M E  G    +         LC+   FE+A +    +  
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEA-GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G KP+V +Y T+I GL K G +  A  +   M   G   + V Y  L+DGF K G    
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE-MWDRMKKNEREKDSFTYCSF 247
           A ++ + L  + S  PN+  Y+ ++ GLC  G  +  L+ ++++ K      D    CS 
Sbjct: 454 AAQLLDELD-KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSI 512

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA------------------ 289
           I GLCK G ++ A R+++ MV  G   DA TYN +I+G CR+                  
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV 572

Query: 290 -------------------GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
                              G++    ++ E    +G   +VV+Y  L  GL   G+VD A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           +S+++ +  +    D+  +  +INGL K   L  A +  +E+   G              
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 376 --------------EGRLA------------------------DAA-SLVNRMDKHGCKL 396
                         EG LA                        DAA  L   M   G   
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A T  SL +G +++ K E A  L +EM+  G  P   ++  +++GL K +  G+    V
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 457 KE 458
           +E
Sbjct: 813 QE 814


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 185/646 (28%), Positives = 327/646 (50%), Gaps = 50/646 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           + A  +  ++   K+  + +  F   ++ P Y H+ + F  +L RL+  ++      I  
Sbjct: 73  LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-R 131

Query: 63  LIEIQKCYCPEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE 101
           ++ I+ C   E++      L+ I   G                K  M + A +++++M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 102 --------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
                    F     IL +K +  +A+  L+ +++  L PDV++Y ++I G  ++ +L  
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A  VFD M + G + N V Y+ LI+G   +G    A ++ E ++ E  + P V TY + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI-EKGIEPTVYTYTLPI 310

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
             LC     +E +E+  RMKK     +  TY + I GL + G +E A  +Y +M++ G+ 
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            + VTYNA+I+  C  G+     +++  M   G L N  +YN +I+GL   G +++A+ +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +E + +        T+  LING     YL K             G + +AA L++ M ++
Sbjct: 431 FEKMLKMGPLPTVVTYNTLING-----YLTK-------------GNVNNAARLLDLMKEN 472

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC+ + +T N L++GF +  KLE+A F F+EM   G +P  VSY  LI+G  K  +   A
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            S +K M E G  P++ +Y+ +INGL +  +   A K+C + +++G  P+V  Y  LI G
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G+ + A +++ +M+KR C+PNL TY++L+ GL + G  D+A  +   +  + L PD
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++   + G     R+  AF  L   +  G  P   T+ +L++ +
Sbjct: 653 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 182/643 (28%), Positives = 296/643 (46%), Gaps = 53/643 (8%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILR---------RLIDPKLVVHVS 58
           +L  L     PH +      A+REP  A    +   + R         + + P+L  H  
Sbjct: 19  VLGFLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAH-- 76

Query: 59  RILELIEIQKCYCPEDVALSVIQAY---GKNSMPDKALDVFQRM------NEIFGCEAGI 109
            + E++ + K     D   SVIQ +    K       ++ F  M      + +F     I
Sbjct: 77  HVAEIVAVHK-----DTE-SVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI 130

Query: 110 ------LCR-KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
                  CR + +  +   FLN +   G    +YS  T++  L K   + GA  ++ +M 
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G++ +++ +N LI+   KKG  +R  E+    + +  + P+V TY  +I G C+    
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGK-VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D    ++DRM K   + +S TY + I+GLC  G V+ A  +  EM+E GI     TY   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I   C     +E  EL   M ++GC  NV +Y  LI GL   GK++ AI ++  + ++  
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             ++ T+  LIN LC  G                  R + A  + + M+ HG   N  T 
Sbjct: 370 VPNTVTYNALINELCVGG------------------RFSTALKIFHWMEGHGSLANTQTY 411

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G      +E A+ LF++M + G  PTVV+YNTLING         A   +  M E
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +PD  TY+ L++G  +  K++ A     + ++ G  P+   Y  LI G    GKV+ 
Sbjct: 472 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDI 531

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L   M++  C PN+ +YN +++GL K     +A +I + ++E+ L P++I+Y   + 
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           GLC   R   AF+  +D   R  LP   T+  L+  +   G +
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 184/650 (28%), Positives = 314/650 (48%), Gaps = 37/650 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   +  T++ LF  A  + GY H   +++ ++ +L           +L 
Sbjct: 94  ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLM 153

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRK 113
            ++ +     E + + +++ YG+  +P +A  +   M  ++ CE           +L   
Sbjct: 154 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG 213

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              +        +  KG+ P VY++G V+  L    ++  A A+  +M   G   N + Y
Sbjct: 214 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 273

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSV--YPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             LI    K G   R  E+ + L     +   P+V T+N  I+GLCK  R  E  ++ DR
Sbjct: 274 QTLIHALSKVG---RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 330

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       +SFTY   +HGLC+ G V+ A  +  ++    +    V +N +I+G+   G+
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV----VLFNTLINGYVSRGR 386

Query: 292 IKECFE-LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + E    + E M   GC  ++ +YN LI GL + G +  A  +   ++ K C  +  T+ 
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI+  CK G L +A  +L+E+   G                 + ++ DA ++   M   
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK + +T NSL+ G  + +K E A+ L+++M  +G     ++YNTLI+   +     EA
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V +ML +G   D ITY+ LI  LC++  I+  L L    + KG  P+    NILI+G
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G ++ AL+   +M  R   P++VTYN+L++GL KTG   +AL +++ +  E + PD
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I+YN  +   C      DA   L+  +  G +P  +TW+ILV   +  G
Sbjct: 687 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 228/445 (51%), Gaps = 23/445 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A + ++ +  +G  P+ ++YG +++GL + G +  A  + +++       N
Sbjct: 315 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPN 370

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +N LI+G+  +G    AK +    ++     P++ TYN +I GLCK G      E+ 
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+    E +  TY   I   CK G +E A  V  EM   G+ ++AV YN +I   C+ 
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+++   ++  M  KGC  ++ ++N LI GL +  K +EA+ +++ +  +   A++ T+
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+   + G + +A++                  LVN M   GC L+  T N L+   
Sbjct: 551 NTLIHAFLRRGAMQEALK------------------LVNDMLFRGCPLDDITYNGLIKAL 592

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A  +E  + LF++M  KG +P  +S N LINGLC+      A  F+++M+ +G  PD+
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ LINGLC++ +   AL L  +   +G  PD   YN LI   C  G  +DA  L S 
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 712

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGD 553
                 +PN VT+  L+    K GD
Sbjct: 713 GVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 26/454 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y +LID     G++     +  ++  E  V+   + + +++    + G   +   +   M
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESL-FILIMKHYGRAGLPGQATRLLLDM 190

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +     + +F   + +  +  AGN       V+ EM+  GI     T+  ++   C   +
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +     L + M R GC+ N + Y  LI  L + G+V+E + + E +    C  D  T   
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            I+GLCK                    R+ +AA LV+RM   G   N++T   LM+G  +
Sbjct: 311 AIHGLCK------------------MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE-MLEKGWKPDMI 469
             K++ A  L  ++     +P VV +NTLING     R  EA + + E ML  G  PD+ 
Sbjct: 353 MGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 408

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LI GLC+   +  A +L  +   KG  P+V  Y ILI   C  G++E+A  +   M
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 468

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +    N V YN L+  L K      AL ++  +  +  +PDI ++N  + GLC  ++ 
Sbjct: 469 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 528

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +A     D L  G++  TIT++ L+ A +  GA
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 185/646 (28%), Positives = 327/646 (50%), Gaps = 50/646 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           + A  +  ++   K+  + +  F   ++ P Y H+ + F  +L RL+  ++      I  
Sbjct: 115 LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-R 173

Query: 63  LIEIQKCYCPEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE 101
           ++ I+ C   E++      L+ I   G                K  M + A +++++M  
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233

Query: 102 --------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
                    F     IL +K +  +A+  L+ +++  L PDV++Y ++I G  ++ +L  
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A  VFD M + G + N V Y+ LI+G   +G    A ++ E ++ E  + P V TY + I
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI-EKGIEPTVYTYTLPI 352

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
             LC     +E +E+  RMKK     +  TY + I GL + G +E A  +Y +M++ G+ 
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            + VTYNA+I+  C  G+     +++  M   G L N  +YN +I+GL   G +++A+ +
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +E + +        T+  LING     YL K             G + +AA L++ M ++
Sbjct: 473 FEKMLKMGPLPTVVTYNTLING-----YLTK-------------GNVNNAARLLDLMKEN 514

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC+ + +T N L++GF +  KLE+A F F+EM   G +P  VSY TLI+G  K  +   A
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA 574

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            S ++ M E G  P++ +Y+ +INGL +  +   A K+C +  ++G  P+V  Y  LI G
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G+ + A +++ +M+KR C+PNL TY++L+ GL + G  D+A  +   +  + L PD
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++   + G     R+  AF  L   +  G  P   T+ +L++ +
Sbjct: 695 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 254/516 (49%), Gaps = 21/516 (4%)

Query: 111 CR-KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           CR + +  +   FLN +   G    +YS  T++  L K   + GA  ++ +M   G++ +
Sbjct: 180 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 239

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ +N LI+   KKG  +R  E+    + +  + P+V TY  +I G C+    D    ++
Sbjct: 240 LLTFNTLINILSKKGK-VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 298

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM K   + +S TY + I+GLC  G V+ A  +  EM+E GI     TY   I   C  
Sbjct: 299 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 358

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +E  EL   M ++GC  NV +Y  LI GL   GK++ AI ++  + ++    ++ T+
Sbjct: 359 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 418

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LIN LC  G  + A++I +                   M+ HG   N  T N ++ G 
Sbjct: 419 NALINELCVGGRFSTALKIFH------------------WMEGHGSLANTQTYNEIIKGL 460

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                +E A+ LF++M + G  PTVV+YNTLING         A   +  M E G +PD 
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ L++G  +  K++ A     + ++ G  P+   Y  LI G    GKV+ AL L   
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++  C PN+ +YN +++GL K     +A +I + + E+ L P++I+Y   + GLC   R
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              AF+  +D   R  LP   T+  L+  +   G +
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 295/617 (47%), Gaps = 68/617 (11%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  AL    +R      +  L+H +L+  + P  V + + I EL    +       A
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF----STA 434

Query: 77  LSVIQ-AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           L +     G  S+ +      Q  NEI       LC     EKA      + + G  P V
Sbjct: 435 LKIFHWMEGHGSLANT-----QTYNEIIKG----LCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+ING +  G++  A  + D M E G E +   YN L+ GF K G    A   ++ 
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +V E  + PN V+Y  +I+G  K G+ D  L + +RM++     +  +Y + I+GL K  
Sbjct: 546 MV-ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
               AE++  +M E G+  + +TY  +IDG CR G+ +  F+++  M ++ CL N+ +Y+
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 664

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI GL + GK DEA  + + +  K    D  T   LI+G            +L      
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV----------VL------ 708

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL--------ENAIFLFK---- 422
             GR+  A  L+ RM   GCK N  T + L+ G  +   L          A++ F     
Sbjct: 709 --GRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766

Query: 423 ------------EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM-I 469
                        MS  GC PT+ +Y+TL++GLC+  RF EA   VK+M E+G+ PD  I
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            YSLLI   C++ ++D ALK+      KGF   +++Y  LI  LC AG+VE+A  L+ NM
Sbjct: 827 YYSLLI-AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCSR 588
            ++    + + +  L+DGL K G+ D  +++  HI+E +   P+I +Y I  + L    +
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLL-HIMESKNFTPNIQTYVILGRELSRIGK 944

Query: 589 ------MSDAFEFLNDA 599
                 ++D  + L D+
Sbjct: 945 SIESEPLADKLKVLKDS 961



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 263/557 (47%), Gaps = 43/557 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E A    + + ++GL P+  +Y  +IN L   G    AL +F  M   G   N
Sbjct: 390 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 449

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I G    GD  +A  ++E++ ++    P VVTYN +ING    G  +    + 
Sbjct: 450 TQTYNEIIKGLCLGGDIEKAMVLFEKM-LKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D MK+N  E D +TY   + G  K G +E A   ++EMVE G+  + V+Y  +IDG  + 
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKD 568

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+     L E M   GC  NV SYN +I GL +  +  EA  I + + E+    +  T+
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             LI+GLC+NG    A +I +++E+                   EG+  +A  L+  M++
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 688

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK------ 445
            G   +  T  SL++GF+   ++++A  L + M   GC P   +Y+ L+ GL K      
Sbjct: 689 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLE 748

Query: 446 ---VERFGEAYSF---------------VKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
                +    YSF               +  M E G +P + TYS L++GLC+  +   A
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L     ++GF PD  +Y  L+   C   +V+ AL+++ +++ +    +L  Y  L+  
Sbjct: 809 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 868

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L K G  ++A  +++++LE+    D I + + + GL     +    + L+    +   P 
Sbjct: 869 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN 928

Query: 608 TITWHILVRAVMNNGAS 624
             T+ IL R +   G S
Sbjct: 929 IQTYVILGRELSRIGKS 945


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/641 (27%), Positives = 318/641 (49%), Gaps = 33/641 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+  +L  LL+   +  T++ +F  A  + GY HS  +++ ++ +L        + R+L 
Sbjct: 69  ITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLL 128

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRK 113
            ++ +     E + + +++ YG+  +P +A  +   M  ++ CE           +L   
Sbjct: 129 QMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVG 188

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
                A      +  KG+ P+ Y++G V+  L    ++  A  +  +M + G   N + Y
Sbjct: 189 NCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIY 248

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LID   K+     A ++ E + +     P+V T+N +I G C+  R  E  ++ DRM 
Sbjct: 249 QTLIDALSKRDRVDEALKLLEEMFL-MGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI 307

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 +  TY   +HGLCK   ++ A+ +  ++    +    V +N +++GF R G++ 
Sbjct: 308 LKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNV----VHFNTLVNGFVRNGRLN 363

Query: 294 ECFE-LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           E    +++ M   G + +V +++ L+ GL + G    A+ +   +  K C  +  T+ +L
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           I+G CK G L +A  IL E+   G                  G++ +A  +   M   GC
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K + +T NSL+ G  +  ++E+A+ L+++M  +G     V++NTLI+   +     EA  
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V +ML +G   D ITY+ LI  LC++  ++  L L  + ++KG TP +   NILI+G C
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           +AGKV +AL+   +M  R   P++VTYN+L++GL K G   +AL ++  +  E ++PD I
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +YN  +  LC      DA   L   +  G +P  +TW+ILV
Sbjct: 664 TYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 266/553 (48%), Gaps = 33/553 (5%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           S   +L++L     P  A  +F     + G + + + F  +++ L     V +   +L  
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYDMLSK-GVSPNDYTFGLVMKALCMVNEVDNACLLLRD 235

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKR 114
           +    C     +  ++I A  K    D+AL + + M  + GC   +          CR  
Sbjct: 236 MTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEM-FLMGCPPDVNTFNTVIYGFCRLN 294

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +  +  + ++ +  KG  P+  +YG +++GL K+  +  A A+  ++       NVV +N
Sbjct: 295 RVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFN 350

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            L++GF + G    A       ++     P+V T++ ++NGLCK G F   LE+ + M  
Sbjct: 351 TLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDA 410

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + +  TY   I G CK G +E A  + REM+  G  ++ V YNA+I   C+ GKI E
Sbjct: 411 KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHE 470

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +++  M  KGC  ++ ++N LI GL    ++++A++++  +  +   A+S T   LI+
Sbjct: 471 ALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIH 530

Query: 354 GLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKL 396
              + G + +A++++N++   G                  G +     L   M + G   
Sbjct: 531 AFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTP 590

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  TCN L+NGF  A K+ NA+   ++M  +G SP +V+YN+LINGLCK  R  EA +  
Sbjct: 591 SIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLF 650

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +++  +G +PD ITY+ LI  LC+    D A  L  + ++ GF P+   +NIL++     
Sbjct: 651 EKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQ 710

Query: 517 GKVEDALQLYSNM 529
              E     Y+  
Sbjct: 711 SNSEGQTITYAQF 723


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 287/545 (52%), Gaps = 32/545 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG---LKPDVYS 137
           D+A+D+  R    FGC   +         LC +++ E+A   L+++ E G     P+V +
Sbjct: 142 DEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVT 201

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y T+I+GL K+  +  A  V   M ++GV+ +VV Y+ +IDG  K     RA+ + + ++
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V P+VVTYN +I+GLCK    D    +   M     + D  TY + I GLCKA  V
Sbjct: 262 -DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 320

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
           + A+ V + M++  +  D  TYN +I G+   G+ KE     E M  +G   +VV+Y++L
Sbjct: 321 DRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL 380

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  L +NGK  EA  I+  +  K    + T +G+L++G                      
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY------------------AAR 422

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G +AD   L++ M  +G   N Y  N ++  + + + ++ A+ +F  MS+ G SP VV+Y
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             LI+ LCK+ R  +A     +M+  G  P+ + ++ L+ GLC   + + A +L  +   
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  P+V  +N ++  LC+ G+V  A +L  +M++    PN+++YNTL+ G    G  D+
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A ++ + ++   L+PD+ISY+  L+G C   R+ +A+    + L +G+ P  +T+  +++
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662

Query: 617 AVMNN 621
            + + 
Sbjct: 663 GLFHT 667



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 270/566 (47%), Gaps = 54/566 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +  ++A+  L  + +KG+K DV +Y T+I+GL K+  +  A  V   M ++GV+ +
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +IDG  K     RA+ + + ++ +  V P+VVTYN +I+GLCK    D    + 
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMI-DKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M   + + D  TY   IHG    G  +   R   EM   G+  D VTY+ ++D  C+ 
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV---------------------- 326
           GK  E  +++  M RKG   NV  Y IL+ G    G +                      
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 327 -------------DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
                        DEA+ I+  + +   + D  T+G+LI+ LCK G ++ A+   N++  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 374 GGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                   R   A  L   M   G + N    N++M       ++  
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L   M R G  P V+SYNTLI G C   R  EA   +  M+  G KPD+I+Y  L+ 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C++ +ID A  L  + L+KG TP    Y+ ++ GL    +  +A +LY NM K     
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++ TYN +++GL KT   D+A +I+  +  + LRP+II++ I +  L    R  DA +  
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
                 G++P  +T+ I+++ ++  G
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEG 773



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 289/598 (48%), Gaps = 35/598 (5%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T   + D   +      +  +  H++ + + P +V + + I  L + Q      D A  V
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV----DRAEGV 291

Query: 80  IQAYGKNSMPDKAL--DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           +Q      M DK +  DV      I G     LC+ +  ++A   L  + +K +KPD+ +
Sbjct: 292 LQ-----HMIDKGVKPDVVTYNTIIDG-----LCKAQAVDRADGVLQHMIDKDVKPDIQT 341

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I+G + +G+    +   +EM+ RG++ +VV Y++L+D   K G    A++I+  ++
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMI 401

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  + PNV  Y ++++G    G   +  ++ D M  N    +++ +   +    K   +
Sbjct: 402 RK-GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           + A  ++  M + G+  D VTY  +ID  C+ G++ +    +  M   G   N V +N L
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + GL    + ++A  ++  + ++    +      ++  LC  G +  A ++++ +E  G 
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            GR  +AA L++ M   G K +  + ++L+ G+ +  +++NA  
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+EM RKG +P  V+Y+T++ GL    RF EA      M++ G + D+ TY++++NGLC
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++  +D A K+      K   P++  + I+I  L   G+ +DA+ L++++     VPN+V
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           TY  +M  + + G  D+   ++  + +    PD +  N  ++ L     +  A  +L+
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLS 818



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 245/496 (49%), Gaps = 22/496 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           ++PD+ +Y  +     + G +    A F  + + G   N V  N L++G         A 
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER---EKDSFTYCSF 247
           +I  R + E    PNVV+ N ++ GLC   R +E LE+   M ++       +  TY + 
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I GLCKA  V+ AE V + M++ G+ +D VTY+ +IDG C+A  +     + + M  KG 
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +VV+YN +I GL +   VD A  + + + +K    D  T+  +I+GLCK   +++A  
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L  +                 +DK   K +  T N L++G++   + +  +   +EM  
Sbjct: 326 VLQHM-----------------IDKD-VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA 367

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G  P VV+Y+ L++ LCK  +  EA      M+ KG KP++  Y +L++G      I  
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
              L    +  G +P+  ++NI++        +++A+ ++S M +    P++VTY  L+D
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L K G  D A+  +N ++ + + P+ + +N  + GLC+  R   A E   +   +G+ P
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRP 547

Query: 607 TTITWHILVRAVMNNG 622
             + ++ ++  + N G
Sbjct: 548 NVVFFNTIMCNLCNEG 563



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 226/424 (53%), Gaps = 29/424 (6%)

Query: 205 NVVTYNVMIN--GLCKCGRFDE-CLEMWDRMKK---NEREKDSFTYCSFIHGLCKAGNVE 258
           +V  +N ++N     +C    E  + +++RM +   N+   D  TY       C+ G +E
Sbjct: 48  SVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIE 107

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCL-NVVSYNIL 316
                +  ++++G  V+ V  N +++G C A ++ E  + L   M   GC+ NVVS N L
Sbjct: 108 HGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTL 167

Query: 317 IRGLLENGKVDEAISIWELLREK---NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           ++GL    +V+EA+ +   + E    NC  +  T+  +I+GLCK   +++A  +L  +  
Sbjct: 168 LKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM-- 225

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                          +DK G KL+  T +++++G  +A  ++ A  + + M  KG  P V
Sbjct: 226 ---------------IDK-GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YNT+I+GLCK +    A   ++ M++KG KPD++TY+ +I+GLC+++ +D A  +   
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            + K   PD+  YN LIHG  S G+ ++ ++    M  R   P++VTY+ L+D L K G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
           C +A +I+  ++ + ++P++  Y I L G  +   ++D  + L+  +  GI P    ++I
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 614 LVRA 617
           ++ A
Sbjct: 450 VLCA 453



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 192/380 (50%), Gaps = 29/380 (7%)

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRA---GKIKECFELWEVMGRKGCLNVV-- 311
           ++ A +++ E++          +N +++   RA      +    L+  M R  C N V  
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMAR-ACSNKVRP 88

Query: 312 ---SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
              +Y+IL       G+++   + + L+ +     +      L+NGLC    +++A+ IL
Sbjct: 89  DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL 148

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                            + RM + GC  N  +CN+L+ G     ++E A+ L   M+  G
Sbjct: 149 -----------------LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDG 191

Query: 429 ---CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
              C+P VV+YNT+I+GLCK +    A   ++ M++KG K D++TYS +I+GLC+++ +D
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD 251

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +    + KG  PDV  YN +I GLC A  V+ A  +  +M  +   P++VTYNT++
Sbjct: 252 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 311

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DGL K    D+A  +  H++++ ++PDI +YN  + G  S     +    L +   RG+ 
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLD 371

Query: 606 PTTITWHILVRAVMNNGAST 625
           P  +T+ +L+  +  NG  T
Sbjct: 372 PDVVTYSLLLDYLCKNGKCT 391



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 212/442 (47%), Gaps = 19/442 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A++    +  KG+KP+V  YG +++G    G +     + D M   G+  N
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +NI++  + KK     A  I+ R+  +  + P+VVTY ++I+ LCK GR D+ +  +
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRM-SQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M  +    +S  + S ++GLC     E AE ++ EM + G+  + V +N ++   C  
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNE 562

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++     L + M R G   NV+SYN LI G    G+ DEA  + +++       D  ++
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISY 622

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDK 391
             L+ G CK G ++ A  +  E+   G            +G     R ++A  L   M K
Sbjct: 623 DTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + + YT N ++NG  + + ++ A  +F+ +  K   P ++++  +I+ L K  R  +
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A      +   G  P+++TY +++  + Q   +D    L     + G TPD  M N +I 
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIR 802

Query: 512 GLCSAGKVEDALQLYSNMKKRN 533
            L   G++  A    S + + N
Sbjct: 803 SLLGRGEIMRAGAYLSKIDEMN 824



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 208/412 (50%), Gaps = 27/412 (6%)

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA---GNVEGAERVYREMVES---GIFVD 275
            D+ L+++D +  + R      +   ++ + +A      E A  ++  M  +    +  D
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
             TY+ +   FCR G+I+  F  + ++ + G  +N V  N L+ GL +  +VDEA+ I  
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI-- 147

Query: 335 LLR---EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           LLR   E  C  +  +   L+ GLC    + +A+++L+ + E G G              
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG-------------- 193

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             C  N  T N++++G  +A  ++ A  + + M  KG    VV+Y+T+I+GLCK +    
Sbjct: 194 -NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDR 252

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++ M++KG KPD++TY+ +I+GLC+++ +D A  +    + KG  PDV  YN +I 
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC A  V+ A  +  +M  ++  P++ TYN L+ G   TG+  + +     +    L P
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           D+++Y++ L  LC   + ++A +     + +GI P    + IL+      GA
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 192/407 (47%), Gaps = 28/407 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           V+ AY K +M D+A+ +F RM++         +G     LC+  + + A    N +   G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+   + +++ GL        A  +F EM+++GV  NVV +N ++     +G  M A+
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + + +     V PNV++YN +I G C  GR DE  ++ D M     + D  +Y + + G
Sbjct: 570 RLIDSM-ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
            CK G ++ A  ++REM+  G+   AVTY+ ++ G     +  E  EL+  M + G   +
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           + +YNI++ GL +   VDEA  I++ L  K+   +  T  ++I+ L K G          
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG---------- 738

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   R  DA  L   +  HG   N  T   +M   IQ   L+    LF  M + GC
Sbjct: 739 --------RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGC 790

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           +P  V  N +I  L        A +++ ++ E  +  +  T SLLI+
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 1/179 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   R+F +AK    ++ + G + D+Y+Y  ++NGL K+  +  A  +F  +  + +  N
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ + I+ID  FK G    A +++   +    + PNVVTY +M+  + + G  DE   ++
Sbjct: 724 IITFTIMIDVLFKGGRKKDAMDLFAS-IPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLF 782

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             M+K+    DS    + I  L   G +  A     ++ E    ++A T + +I  F R
Sbjct: 783 LAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/646 (26%), Positives = 314/646 (48%), Gaps = 30/646 (4%)

Query: 6   KRLLNLLKAEKNPHTALALFDSA-TREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
           +RL+  L+ + +P  AL + +SA  R+ G   S  ++  I+R+L        +  ++  +
Sbjct: 57  ERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEM 116

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQ 115
             +       +  S I +Y +  + D A D+     ++FG +A          +L    +
Sbjct: 117 RREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK 176

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +  +     +  +G++PDV ++ TVI+ L ++     A+ + +EM    V  +   +  
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L++GF ++G    A  +  R+  E    P  VT NV+ING CK GR  + L    +   +
Sbjct: 237 LMEGFVEEGSIEAALRLKARMS-EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  T+ +F++GLC+ G+V+ A +V   M++ G   D  TY+ +I+  C  G+++E 
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M   GCL +  ++N LI  L    +++EA+ +   L  K  + +  T  +LIN 
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           LCK G  + A+++  E++  G                  G+LA A  L+  M+  GC  +
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N++++G  +  ++E A  +F +M   G     +++NTLI+GLC  ER  +A   V 
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+ +G +P+ +TY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC A 
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + + AL+L   M+ +   P    YN ++  LF+  +   AL ++  + E    PD  +Y 
Sbjct: 596 RTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYK 655

Query: 578 ITLKGLC-SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  +GLC     + +AF+FL +    G +P   ++ +L   ++N G
Sbjct: 656 IVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 18/302 (5%)

Query: 50  DPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAG 108
           DP L V   R+ E ++   C  P++V  ++ I     +    KALD+ + M E+ GC   
Sbjct: 421 DPHLAV---RLFEEMKSSGC-TPDEVTYNILIDNLCSSGKLAKALDLLKEM-EVSGCPQS 475

Query: 109 I---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
                     LC++R+ E+A+   + +   G+  +  ++ T+I+GL  +  +  A  + D
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +M   G++ N V YN ++  + K+G+  +A +I + +        +VVTY  +INGLCK 
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTA-NGFEVDVVTYATLINGLCKA 594

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            R    L++   M+    +     Y   I  L +  N   A  ++REM E G   DA TY
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTY 654

Query: 280 NAMIDGFCRAG-KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
             +  G CR G  IKE F+    M   G +    S+ +L  GLL  G  D  I   EL+ 
Sbjct: 655 KIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIV 714

Query: 338 EK 339
           EK
Sbjct: 715 EK 716


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 177/661 (26%), Positives = 320/661 (48%), Gaps = 74/661 (11%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-ELI 64
           K +  ++K + +P  AL +F+SA  E G+ H+   +  I+++L        + ++L E+ 
Sbjct: 8   KHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR 67

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQ 115
           E       E   +  ++ YG+     +A+D F+RM + + C+           IL     
Sbjct: 68  ENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERM-DFYNCDPSVHSHNAIMNILVEFGY 126

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
             +A +    + ++G++ DVY+Y   I    K+     AL +   M E G ++N V Y  
Sbjct: 127 HNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCT 186

Query: 176 LIDGFFKKGDYMRAKEIW-------------------------------ERL---VMETS 201
           ++ G +  G++  A+E++                               ERL   V++  
Sbjct: 187 VVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRG 246

Query: 202 VYPNVVTYNVMINGLCKCGRFD---------ECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           V PN+ T+N+ + GLC+ G  D         E  E   +M     E D  TY S I G C
Sbjct: 247 VCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYC 306

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K G V+ A RV ++ V  G   D  TY ++I+GFC+ G       ++ + +G+    ++V
Sbjct: 307 KKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIV 366

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI+GL + G +  A+ +   + E  C  +  T+ ++INGLCK G +          
Sbjct: 367 LYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV---------- 416

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                   +DA+ LV+     GC  + +T N+L++G+ +  KL++A  +   M  +G +P
Sbjct: 417 --------SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V++YNTL+NGLCK  +  E     K M EKG  P++ITY+++++ LC++KK++ A+ L 
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR-NCVPNLVTYNTLMDGLFK 550
            +   KG  PDV  +  L  G C  G ++ A QL+  M+K+ +      TYN ++    +
Sbjct: 529 GEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSE 588

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
             + + A+++++ +      PD  +Y + + G C    ++  ++FL + + +  +P+  T
Sbjct: 589 QLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTT 648

Query: 611 W 611
           +
Sbjct: 649 F 649



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 201/397 (50%), Gaps = 23/397 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K   + A R L     KG KPD ++Y ++ING  K GD   A+AVF +   +G+  ++
Sbjct: 306 CKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSI 365

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LI G  ++G  + A ++   +  E    PN+ TYN++INGLCK G   +   + D
Sbjct: 366 VLYNTLIKGLSQQGLILPALQLMNEMA-ENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
                    D FTY + I G CK   ++ A  +   M   G+  D +TYN +++G C+AG
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K +E  E+++ M  KGC  N+++YNI++  L +  KV+EA+ +   ++ K    D  + G
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFG 544

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG--CKLNAYTCNSLMNG 407
            L  G CK G ++ A Q                  L  RM+K    C   A T N +++ 
Sbjct: 545 TLFTGFCKIGDIDGAYQ------------------LFRRMEKQYDVCHTTA-TYNIIVSA 585

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +   +  A+ LF  M   GC P   +Y  +I+G CK+    + Y F+ E +EK + P 
Sbjct: 586 FSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPS 645

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           + T+  ++N LC   K+  A+ +    LQKG  P+  
Sbjct: 646 LTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 37/490 (7%)

Query: 150 DLLGALAVFDEM-FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV- 207
           D L AL +F+    E G +     Y  ++      G++    E  E+L+ E     N   
Sbjct: 19  DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEF----EEMEKLLSEMRENVNNAL 74

Query: 208 ---TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
               Y   +    + G+  E ++ ++RM     +    ++ + ++ L + G    A +VY
Sbjct: 75  LEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVY 134

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
             M + G+  D  TY   I  FC+  +      L   M   GC  N V+Y  ++ GL ++
Sbjct: 135 MRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS 194

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ D A  +++ +  +    D      L++ LCK G + ++ ++L +V            
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVL----------- 243

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF---------LFKEMSRKGCSPTVV 434
                  K G   N +T N  + G  +   L+ A+            ++M   G  P  +
Sbjct: 244 -------KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN++I+G CK     +A   +K+ + KG+KPD  TY  LING C+    D A+ +    
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L KG  P + +YN LI GL   G +  ALQL + M +  C+PN+ TYN +++GL K G  
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             A  + +  + +   PDI +YN  + G C   ++  A E +N    +G+ P  IT++ L
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 615 VRAVMNNGAS 624
           +  +   G S
Sbjct: 477 LNGLCKAGKS 486



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 77/396 (19%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+N    + +P  A+A+F     + G   S  L++ +++ L    L++   +++  +   
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 68  KCY-----------------CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL 110
            C                  C  D +  V  A  K   PD    +F     I G      
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD----IFTYNTLIDG-----Y 445

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++ + + A   +N +W +G+ PDV +Y T++NGL K+G     + +F  M E+G   N+
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 171 VCYNILID-----------------------------------GFFKKGDYMRAKEIWER 195
           + YNI++D                                   GF K GD   A +++ R
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +  V     TYN++++   +    +  ++++  MK +  + D++TY   I G CK G
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG 625

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN------ 309
           N+    +   E +E        T+  +++  C   K+ E   +  +M +KG +       
Sbjct: 626 NITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTI 685

Query: 310 -------VVSYNILIRGLLENGKVDEAISIWELLRE 338
                  V +  IL+  LL+ G +  A   +ELL +
Sbjct: 686 FEADKKVVAAPKILVEDLLKKGHI--AYYTYELLYD 719


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/631 (27%), Positives = 303/631 (48%), Gaps = 37/631 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V+    +L  LK E +   AL  F S      + H+P  +  ++ +L   + +  V  +L
Sbjct: 40  VLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLL 99

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
           + ++++   C ED+ +SVI +Y +    ++AL  F RM +        I+      L  +
Sbjct: 100 QQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDE 159

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            +F+      +++ + G++P+V++Y  ++  L K+  + GA  +  EM  +G + + V Y
Sbjct: 160 NRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSY 219

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    K G    A+E      +  S  P+V  YN +ING+CK   F+E  ++ D M 
Sbjct: 220 TTLISSLCKLGKVKEARE------LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMM 273

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
               + +  +Y + I+ L  AGNVE +  V  +M   G   +  T+ ++I GF   G   
Sbjct: 274 NKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH 333

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  + W+ M R+G + NVV+YN L+ GL     + +A+S++  +    C  +  T+  LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN--AYTCNSLMNGFIQ 410
           +G  K G L+ A ++ N                   M  HGC  N  AYTC  +++   +
Sbjct: 394 DGYAKAGDLDGASEVWN------------------WMITHGCHPNVVAYTC--MVDVLCR 433

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            S    A  L + M  + C P  V++NT I GLC   R   A     +M   G  P+  T
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L++ L + ++   A  L      +G   ++  YN +I+G C AG + +AL+L   M 
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R   P+ +T N ++D   K G  + A+++ + +   +  PDII+Y   + G+C+   + 
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE 613

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           +A  +L   L  GI P   TW++LVR + +N
Sbjct: 614 EAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 216/408 (52%), Gaps = 19/408 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C++  FE+A + L+ +  KG+ P+V SY T+IN L  +G++  +LAV  +MF RG   N
Sbjct: 256 VCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPN 315

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  +  LI GFF KG    A + W+R++ E  V PNVV YN +++GLC      + + ++
Sbjct: 316 LHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLCSKRSLGDAVSVF 374

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M+ N    +  TY + I G  KAG+++GA  V+  M+  G   + V Y  M+D  CR 
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRN 434

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
               + + L E M  + C  N V++N  I+GL  +G+VD AI +++ +    C  ++TT+
Sbjct: 435 SMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++ L K+    +A  ++ ++E  G                  G L +A  L+ +M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +A T N +++ + +  K+  AI L   +S     P +++Y +LI+G+C      E
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           A  +++ ML +G  P++ T+++L+  L  +     A++     L  GF
Sbjct: 615 AIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 237/515 (46%), Gaps = 27/515 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L  +R+ +  +  L  +  +G+      + +VI    ++G    AL  F  M +  V+  
Sbjct: 86  LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPT 145

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN ++D    +  +     I+  +  +  + PNV TYN+++  LCK  R D   ++ 
Sbjct: 146 VKIYNHILDALLDENRFQMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCR 288
             M     + D  +Y + I  LCK G V+ A    RE+  S  F  +V  YNA+I+G C+
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----RELAMS--FTPSVPVYNALINGVCK 258

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
               +E F+L + M  KG   NV+SY  +I  L + G V+ ++++   +  + C+ +  T
Sbjct: 259 EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHT 318

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              LI G    G  ++A+   +                  RM + G   N    N+LM+G
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWD------------------RMIREGVVPNVVAYNALMHG 360

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                 L +A+ +F +M   GC P V +Y+ LI+G  K      A      M+  G  P+
Sbjct: 361 LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++ Y+ +++ LC++   + A  L      +   P+   +N  I GLC +G+V+ A++++ 
Sbjct: 421 VVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFD 480

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C PN  TYN L+D L K     +A  +   +    +  ++++YN  + G C   
Sbjct: 481 QMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAG 540

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + +A E L   + RG  P  IT +I++ A    G
Sbjct: 541 MLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQG 575



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 24/439 (5%)

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
           D   A E ++ +    S     +TY +MI  L      D    +  +MK          +
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S I    +AG+ E A + +  M +  +      YN ++D      + +    ++  M +
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   NV +YNIL++ L +N +VD A  +   +  K C+ D  ++  LI+ LCK      
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK------ 228

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
               L +V+E  E  ++   S+                N+L+NG  +    E A  L  E
Sbjct: 229 ----LGKVKEARELAMSFTPSVP-------------VYNALINGVCKEYTFEEAFQLLDE 271

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  KG  P V+SY T+IN L        + + + +M  +G  P++ T++ LI G      
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              AL    + +++G  P+V  YN L+HGLCS   + DA+ +++ M+   C PN+ TY+ 
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DG  K GD D A E+WN ++     P++++Y   +  LC  S  + A+  + +     
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 604 ILPTTITWHILVRAVMNNG 622
             P T+T++  ++ +  +G
Sbjct: 452 CPPNTVTFNTFIKGLCGSG 470



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 10/235 (4%)

Query: 395 KLNAYTCN-----SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           KL   +C+     S++  + +A   E A+  F  M      PTV  YN +++ L    RF
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
                    M + G +P++ TY++L+  LC++ ++D A KL  +   KG  PD   Y  L
Sbjct: 163 QMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I  LC  GKV++A +L  +       P++  YN L++G+ K    ++A ++ + ++ + +
Sbjct: 223 ISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            P++ISY   +  L     +  +   L     RG  P   T+  L++     G S
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 282/535 (52%), Gaps = 28/535 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +        FG   G + +K+Q+       N +   G+  +VYS   +
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +   ++ A++V  +MF+ G++ + + +N LI+G   +G+   A  ++  +V    
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+V++Y+ +INGLCK G     L++  +M++   + +   Y + I  LCK   V  A 
Sbjct: 194 -QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            +  EMV+ GI  D VTY+ ++ GFC  G + E   L+ E++GR    N V++ IL+ GL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V EA  ++E + +K    ++ T+  L++G C N  +++A ++L+           
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD----------- 361

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   GC    ++ N L+NG+ +  +L+ A  L  EMS K  +P  V+Y+TL+
Sbjct: 362 -------IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            GLC+V R  EA +  KEM   G  PD++TYS L++GLC+   +D ALKL     +    
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +YNILI G+  AGK+E A +L+S +      P + TY  ++ GL K G  D+A E+
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + ++   P+  SYN+ ++G       S A   +++ + +     + T+ +L+
Sbjct: 535 FRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 216/437 (49%), Gaps = 20/437 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + + ++A    N +  +G +PDV SY TVINGL KSG+   AL +  +M E+G + N+
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +ID   K      A ++   +V +  + P+VVTY+ +++G C  G  +E   +++
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMV-DRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ T+   + GLCK G V  A  V+  M + G   +A TYNA++DG+C   
Sbjct: 292 EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNN 351

Query: 291 KIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E  ++ ++M  KGC  VV SYNILI G  +  ++DEA S+   + EK    D+ T+ 
Sbjct: 352 QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYS 411

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L+ GLC+                   GR  +A +L   M   G   +  T ++L++G  
Sbjct: 412 TLMQGLCQ------------------VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L+ A+ L K M      P +V YN LI G+    +   A     ++   G +P + 
Sbjct: 454 KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I GL +    D A +L  +    GF P+   YN++I G         A++L   M
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573

Query: 530 KKRNCVPNLVTYNTLMD 546
             +    +  T+  L+D
Sbjct: 574 VGKRFSADSSTFQMLLD 590



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 130/242 (53%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA +   RM +   + +       +    +  +    + L  +M   G +  V S N LI
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N LC++     A S + +M + G +PD IT++ LING C   +I  A+ L  + +++G  
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PDV  Y+ +I+GLC +G    ALQL   M+++ C PNLV Y T++D L K    + A+++
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + +++  + PD+++Y+  L G CS   +++A    N+ + R ++P T+T+ ILV  +  
Sbjct: 255 LSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314

Query: 621 NG 622
            G
Sbjct: 315 EG 316



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 120/213 (56%), Gaps = 2/213 (0%)

Query: 407 GFIQ--ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           GF+   +  +++A+  F  M R    P+VV +   +  + K +++    S   +M   G 
Sbjct: 64  GFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGV 123

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
             ++ + ++LIN LC+   +  A+ +  +  + G  PD   +N LI+G C  G++++A+ 
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVG 183

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L++ M +R   P++++Y+T+++GL K+G+   AL++   + E+  +P++++Y   +  LC
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC 243

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             + ++DA + L++ + RGI P  +T+  ++  
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276



 Score = 45.4 bits (106), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 35/175 (20%)

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A +    ML    +P ++ +   +  + + K+    + LC Q    G T +V   NILI
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           + LC    V  A+ +   M                   FK G                ++
Sbjct: 135 NCLCRLNHVVFAISVLGKM-------------------FKLG----------------IQ 159

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           PD I++N  + G C    + +A    N+ + RG  P  I++  ++  +  +G ++
Sbjct: 160 PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 254/475 (53%), Gaps = 23/475 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  +FL  +  +G  PDV +  ++I G  +SG    A  + + +   G   +
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN+LI G+ K G+  +A ++ ER+    SV P+VVTYN ++  LC  G+  E +E+ 
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM----SVAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  + E   D  TY   I   C    V  A ++  EM + G   D VTYN +I+G C+ 
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K C+    T 
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+   L +AI +L                   +M KHGC  N+ + N L++GF
Sbjct: 353 NILINFLCRKRLLGRAIDVLE------------------KMPKHGCMPNSLSYNPLLHGF 394

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            Q  K++ AI   + M  +GC P +V+YNTL+  LCK  +   A   + ++  KG  P +
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL +  K + A +L  +  +KG  PD+  Y+ L+ GL   GKV++A++++ +
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           M+  +  P+ VTYN +M GL K     +A++   +++E+  +P   +Y I ++G+
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 247/465 (53%), Gaps = 22/465 (4%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           NI +    + G+     +  ER++ +  + P+V+    +I G C+ G+  +   + + ++
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTRKATRIMEILE 169

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            +    D  TY   I G CK+G ++ A +V   M    +  D VTYN ++   C +GK+K
Sbjct: 170 NSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLK 226

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  E+ +   ++ C  +V++Y ILI     +  V +A+ + + +R+K C  D  T+ VLI
Sbjct: 227 EAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 286

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           NG+CK G L++AI+ LN +   G                  GR  DA  L+  M + GC 
Sbjct: 287 NGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCS 346

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T N L+N   +   L  AI + ++M + GC P  +SYN L++G C+ ++   A  +
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           ++ M+ +G  PD++TY+ L+  LC+  K D A+++  Q   KG +P +  YN +I GL  
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK E A +L   M+++   P+++TY+TL+ GL   G  D+A++I++ +    ++P  ++
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVT 526

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           YN  + GLC   + S A +FL   + +G  PT  T+ IL+  + +
Sbjct: 527 YNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 217/424 (51%), Gaps = 52/424 (12%)

Query: 244 YCSFIH--GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           + S IH   L + G +E   +    M+  G   D +   ++I GFCR+GK ++   + E+
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 302 MGRKGCL---------------------------------NVVSYNILIRGLLENGKVDE 328
           +   G +                                 +VV+YN ++R L ++GK+ E
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKE 227

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A+ + +   ++ C  D  T+ +LI   C +  + +A+++L+E+ + G             
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EGRL +A   +N M  +GC+ N  T N ++       +  +A  L  +M RKGCSP
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           +VV++N LIN LC+    G A   +++M + G  P+ ++Y+ L++G CQ KK+D A++  
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              + +G  PD+  YN L+  LC  GK + A+++ + +  + C P L+TYNT++DGL K 
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A E+   +  + L+PDII+Y+  L+GL    ++ +A +  +D     I P+ +T+
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 612 HILV 615
           + ++
Sbjct: 528 NAIM 531



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 219/458 (47%), Gaps = 52/458 (11%)

Query: 58  SRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           +RI+E++E      P+ +  +V I  Y K+   DKAL V +RM+                
Sbjct: 162 TRIMEILE-NSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---------------- 204

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
                         + PDV +Y T++  L  SG L  A+ V D   +R    +V+ Y IL
Sbjct: 205 --------------VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTIL 250

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+         +A ++ + +  +    P+VVTYNV+ING+CK GR DE ++  + M    
Sbjct: 251 IEATCNDSGVGQAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + +  T+   +  +C  G    AER+  +M+  G     VT+N +I+  CR   +    
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           ++ E M + GC+ N +SYN L+ G  +  K+D AI   E++  + C  D  T+  L+  L
Sbjct: 370 DVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 429

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK+G  + A++ILN+                  +   GC     T N++++G  +  K E
Sbjct: 430 CKDGKADAAVEILNQ------------------LSSKGCSPVLITYNTVIDGLTKVGKTE 471

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  L +EM RKG  P +++Y+TL+ GL    +  EA     +M     KP  +TY+ ++
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            GLC++++   A+      ++KG  P    Y ILI G+
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 128/225 (56%), Gaps = 5/225 (2%)

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +  N  +   ++  +LE  +   + M  +G  P V++  +LI G C+  +  +A   ++ 
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAG 517
           +   G  PD+ITY++LI G C+S +ID AL    Q L++    PDV  YN ++  LC +G
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKAL----QVLERMSVAPDVVTYNTILRSLCDSG 223

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           K+++A+++     +R C P+++TY  L++         +A+++ + + ++  +PD+++YN
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + G+C   R+ +A +FLN+    G  P  IT +I++R++ + G
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 178/610 (29%), Positives = 285/610 (46%), Gaps = 77/610 (12%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE-------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           SVIQ +       +A+ +F  M E       ++      L ++++ E  K+ +  + ++G
Sbjct: 15  SVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRG 74

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             PD +++ T++ GL K+G +  A  V DEM  R +       + L      +G   RA 
Sbjct: 75  CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAF 134

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM------------------ 232
           ++ E  +M  +   N   YN+++  LCK  R D+ LE+   M                  
Sbjct: 135 QLLE--IMPVA---NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG 189

Query: 233 --------------KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
                         ++N RE    T    + G C  G V+ A  + R M +     D V+
Sbjct: 190 LMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVS 249

Query: 279 YNAMIDGFCRAGKIKECFELW-------EVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
           Y  ++DG C+AG+++E   L+                ++  YNI+I GL +N ++DEA+ 
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           ++E + E+N + DS ++G+LI+GL K G LN A  +  ++   G                
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                 DA  L   M++ GC  +  T N +++   +   LE A  L K+M   G  P VV
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM-------- 486
           +YNT+++GLCK  R  EA     EM   G  P+  +++ +I GLCQ  KID         
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489

Query: 487 -ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L  +    G  PDV  Y+ LI GLCS  +V+DA  L  +M KR C P +VT NTL+
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GL K G   +A E+ + ++     PD+++YN  + G C   +   A E L+D + RG+ 
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609

Query: 606 PTTITWHILV 615
           P  +T+  LV
Sbjct: 610 PNVVTYTALV 619



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 265/497 (53%), Gaps = 17/497 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE------MFE 163
            C + Q +KA+  L ++ ++   PD  SY TV++GL K+G +  A+ +F +         
Sbjct: 222 FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSS 281

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
                ++  YNI+I G  +      A +++E++  E +V P+  +Y ++I+GL K G+ +
Sbjct: 282 SSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKM-NERNVSPDSWSYGILIDGLAKAGKLN 340

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           +   ++ ++  +     +  Y S IHGLC A + + A  ++ +M   G     VTYN MI
Sbjct: 341 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMI 400

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D  C+ G ++E  +L + M   G + +VV+YN ++ GL ++ +V+EA+ ++  +    C 
Sbjct: 401 DASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCT 460

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  +H  +I GLC+   +++A Q          G+L +A  L+ RM   G   +  T +
Sbjct: 461 PNRRSHNTIILGLCQQSKIDQACQ---------RGKLDEAFRLLKRMTDDGHVPDVVTYS 511

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G    +++++A  L ++M ++ C PTVV+ NTLI+GLCK  R  EA   +  M+  
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 571

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD++TY+ L++G C++ + + A +L    + +G  P+V  Y  L+ GLC A ++ +A
Sbjct: 572 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             +++ MK   C PNL TY  L+ G    G  D  L+++  ++   + PD + Y      
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691

Query: 583 LCSCSRMSDAFEFLNDA 599
           LC   R + A E L + 
Sbjct: 692 LCKSGRSARALEILREG 708



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 276/567 (48%), Gaps = 73/567 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A     ++ EK +     S  +V+ GL+ SG +  AL V+ E      E  
Sbjct: 155 LCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPC 211

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR-------- 221
           +V  N+L++GF  +G   +A+E+  R + +    P+ V+Y  +++GLCK GR        
Sbjct: 212 LVTLNVLLEGFCSRGQVDKARELL-RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF 270

Query: 222 ---------------------------------FDECLEMWDRMKKNEREKDSFTYCSFI 248
                                             DE ++M+++M +     DS++Y   I
Sbjct: 271 GDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILI 330

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GL KAG +  A  ++++++ SG+    V Y ++I G C A    +  EL+  M R+GC 
Sbjct: 331 DGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            + V+YN++I    + G ++EA  + + + E     D  T+  +++GLCK+  + +A+ +
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK---------LENAI 418
            NE                  M++ GC  N  + N+++ G  Q SK         L+ A 
Sbjct: 451 FNE------------------MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAF 492

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L K M+  G  P VV+Y+TLI+GLC + R  +A   +++M+++  KP ++T + LI+GL
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++ +I  A ++    +  G +PDV  YN L+HG C AG+ E A +L S+M  R   PN+
Sbjct: 553 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY  L+ GL K     +A  ++  +      P++ +Y   + G CS  ++    +   +
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 672

Query: 599 ALCRGILPTTITWHILVRAVMNNGAST 625
            +C GI P  + +  L   +  +G S 
Sbjct: 673 MVCAGISPDHVVYGTLAAELCKSGRSA 699



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 237/504 (47%), Gaps = 66/504 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A +    + E+ + PD +SYG +I+GL K+G L  A  +F ++   GV  +
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI G      +  A+E++  +       P+ VTYNVMI+  CK G  +E  ++ 
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 416

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M ++    D  TY + + GLCK+  VE A  ++ EM   G   +  ++N +I G C+ 
Sbjct: 417 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 476

Query: 290 ---------GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
                    GK+ E F L + M   G + +VV+Y+ LI GL    +VD+A  + E + ++
Sbjct: 477 SKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 536

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
            C     T   LI+GLCK G + +A ++L+ +   G+                    +  
Sbjct: 537 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP------------------DVV 578

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L++G  +A + E A  L  +M  +G +P VV+Y  L++GLCK  R  EA     +M
Sbjct: 579 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 638

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL---------- 509
              G  P++ TY+ LI G C + ++D  LKL  + +  G +PD  +Y  L          
Sbjct: 639 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 698

Query: 510 ---------------------------IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
                                      + GL  AGK+E AL    +M +   +P      
Sbjct: 699 ARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA 758

Query: 543 TLMDGLFKTGDCDKALEIWNHILE 566
           +L+ GL K+G   +A  +   I++
Sbjct: 759 SLVAGLCKSGQGGEARAVLEEIMD 782



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 259/558 (46%), Gaps = 98/558 (17%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           MF++G+    + +  +I G+   G    A +I+  +    S YP+V  YNV+I+ L K  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM------------- 267
             +   +M   M       DSFT+ + + GLCKAG ++ AE V  EM             
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 268 ------------------VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
                             +E     ++  YN ++   C+A ++ +  EL   M  K   L
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPL 178

Query: 309 NVVSYNILIRGLLENGKVDEAISIW-----------------------------ELLR-- 337
              S + ++ GL+++G++DEA+ ++                             ELLR  
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 338 -EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------------- 375
            ++ C  D  ++  +++GLCK G + +A+++  + E                        
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               R+ +A  +  +M++     ++++   L++G  +A KL +A  LF+++   G +P+ 
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y +LI+GLC    F +A     +M  +G  P  +TY+++I+  C+   ++ A  L  +
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT-- 551
            ++ G  PDV  YN ++ GLC + +VE+AL L++ M++  C PN  ++NT++ GL +   
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 478

Query: 552 -------GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
                  G  D+A  +   + ++   PD+++Y+  + GLCS +R+ DA   L D + R  
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 605 LPTTITWHILVRAVMNNG 622
            PT +T + L+  +   G
Sbjct: 539 KPTVVTQNTLIHGLCKAG 556



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 202/435 (46%), Gaps = 62/435 (14%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D A ++F  MN   GC    +         C++   E+A   +  + E G  PDV +Y T
Sbjct: 375 DDARELFADMNR-RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI---------DGFFKKGDYMRAKE 191
           V++GL KS  +  AL +F+EM   G   N   +N +I         D   ++G    A  
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + +R+  +  V P+VVTY+ +I+GLC   R D+   + + M K + +    T  + IHGL
Sbjct: 494 LLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNV 310
           CKAG ++ A  V   MV SG   D VTYN ++ G CRAG+ +   EL   M  +G   NV
Sbjct: 553 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+Y  L+ GL +  ++ EA  ++  ++   C  +  T+  LI G C  G ++  +++  E
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 672

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY---TCNSLMNGFIQ 410
           +   G                  GR A A  ++ R  +   +  A+        ++G ++
Sbjct: 673 MVCAGISPDHVVYGTLAAELCKSGRSARALEIL-REGRESLRSEAWGDEVYRFAVDGLLE 731

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS---------------- 454
           A K+E A+   ++M R G  P      +L+ GLCK  + GEA +                
Sbjct: 732 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARG 791

Query: 455 ----FVKEMLEKGWK 465
               FV+EM+ KG++
Sbjct: 792 KAAKFVEEMVGKGYE 806



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 216/474 (45%), Gaps = 50/474 (10%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL-------------IEIQKCY 70
           L D   +      + +LF  +L   + P  V + S I  L              ++ +  
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388

Query: 71  CPED-VALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAK 120
           CP   V  +V I A  K  M ++A D+ ++M E         +      LC+  + E+A 
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKS---------GDLLGALAVFDEMFERGVETNVV 171
              N +   G  P+  S+ T+I GL +          G L  A  +   M + G   +VV
Sbjct: 449 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ LI G         A+ + E +V +    P VVT N +I+GLCK GR  E  E+ D 
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMV-KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  + +  D  TY + +HG C+AG  E A  +  +MV  G+  + VTY A++ G C+A +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E   ++  M   GC  N+ +Y  LI G    G+VD  + ++  +     + D   +G 
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L   LCK+G   +A++IL E  E          SL  R +  G ++  +     ++G ++
Sbjct: 688 LAAELCKSGRSARALEILREGRE----------SL--RSEAWGDEVYRFA----VDGLLE 731

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           A K+E A+   ++M R G  P      +L+ GLCK  + GEA + ++E+++  +
Sbjct: 732 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 785



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             Q+G  P   ++  +I G C+ G+  +A++++S M++ +  P    YN L+D L K  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHS-PYPDVYNVLIDSLSKRQE 59

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +   ++   +++    PD  ++   L GLC   +M +A   +++   R I P   T   
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 614 LVRAVMNNGA 623
           L   +   G+
Sbjct: 120 LAHELCLRGS 129


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 175/631 (27%), Positives = 303/631 (48%), Gaps = 37/631 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V+    +L  LK E +   AL  F S      + H+P  +  ++ +L   + +  V  +L
Sbjct: 40  VLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLL 99

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
           + ++++   C ED+ +SVI +Y +    ++AL  F RM +        I+      L  +
Sbjct: 100 QQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDE 159

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            +F+      +++ + G++P+V++Y  ++  L K+  + GA  +  EM  +G + + V Y
Sbjct: 160 NRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSY 219

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    K G    A+E      +  S  P+V  YN +ING+CK   F+E  ++ D M 
Sbjct: 220 TTLISSLCKLGKVKEARE------LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMM 273

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
               + +  +Y + I+ L  AGNVE +  V  +M   G   +  T+ ++I GF   G   
Sbjct: 274 NKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH 333

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  + W+ M R+G + NVV+YN L+ GL     + +A+S++  +    C  +  T+  LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN--AYTCNSLMNGFIQ 410
           +G  K G L+ A ++ N                   M  HGC  N  AYTC  +++   +
Sbjct: 394 DGYAKAGDLDGASEVWN------------------WMITHGCHPNVVAYTC--MVDVLCR 433

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            S    A  L + M  + C P  V++NT I GLC   R   A     +M   G  P+  T
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L++ L + ++   A  L      +G   ++  YN +I+G C AG + +AL+L   M 
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R   P+ +T N ++D   K G  + A+++ + +   +  PDII+Y   + G+C+   + 
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE 613

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           +A  +L   L  GI P   TW++LVR + +N
Sbjct: 614 EAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 237/515 (46%), Gaps = 27/515 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L  +R+ +  +  L  +  +G+      + +VI    ++G    AL  F  M +  V+  
Sbjct: 86  LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPT 145

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN ++D    +  +     I+  +  +  + PNV TYN+++  LCK  R D   ++ 
Sbjct: 146 VKIYNHILDALLDENRFQMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCR 288
             M     + D  +Y + I  LCK G V+ A    RE+  S  F  +V  YNA+I+G C+
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----RELAMS--FTPSVPVYNALINGVCK 258

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
               +E F+L + M  KG   NV+SY  +I  L + G V+ ++++   +  + C+ +  T
Sbjct: 259 EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHT 318

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              LI G    G  ++A+   +                  RM + G   N    N+LM+G
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWD------------------RMIREGVVPNVVAYNALMHG 360

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                 L +A+ +F +M   GC P V +Y+ LI+G  K      A      M+  G  P+
Sbjct: 361 LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++ Y+ +++ LC++   + A  L      +   P+   +N  I GLC +G+V+ A++++ 
Sbjct: 421 VVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFD 480

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C PN  TYN L+D L K     +A  +   +    +  ++++YN  + G C   
Sbjct: 481 QMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAG 540

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + +A E L   + RG  P  IT +I++ A    G
Sbjct: 541 MLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQG 575



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 24/439 (5%)

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
           D   A E ++ +    S     +TY +MI  L      D    +  +MK          +
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S I    +AG+ E A + +  M +  +      YN ++D      + +    ++  M +
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   NV +YNIL++ L +N +VD A  +   +  K C+ D  ++  LI+ LCK      
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK------ 228

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
               L +V+E  E  ++   S+                N+L+NG  +    E A  L  E
Sbjct: 229 ----LGKVKEARELAMSFTPSVP-------------VYNALINGVCKEYTFEEAFQLLDE 271

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  KG  P V+SY T+IN L        + + + +M  +G  P++ T++ LI G      
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              AL    + +++G  P+V  YN L+HGLCS   + DA+ +++ M+   C PN+ TY+ 
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DG  K GD D A E+WN ++     P++++Y   +  LC  S  + A+  + +     
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 604 ILPTTITWHILVRAVMNNG 622
             P T+T++  ++ +  +G
Sbjct: 452 CPPNTVTFNTFIKGLCGSG 470



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 10/235 (4%)

Query: 395 KLNAYTCN-----SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           KL   +C+     S++  + +A   E A+  F  M      PTV  YN +++ L    RF
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
                    M + G +P++ TY++L+  LC++ ++D A KL  +   KG  PD   Y  L
Sbjct: 163 QMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I  LC  GKV++A +L  +       P++  YN L++G+ K    ++A ++ + ++ + +
Sbjct: 223 ISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            P++ISY   +  L     +  +   L     RG  P   T+  L++     G S
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 187/645 (28%), Positives = 326/645 (50%), Gaps = 54/645 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           + A  +  ++   K+  + +  F   ++ P Y H+ + F  +L RL+  ++      I  
Sbjct: 73  LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-R 131

Query: 63  LIEIQKCYCPEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE 101
           ++ I+ C   E++      L+ I   G                K  M + A +++++M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 102 --------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
                    F     IL +K +  +A+  L+ +++  L PDV++Y ++I G  ++ +L  
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A  VFD M + G + N V Y+ LI+G   +G    A ++ E ++ E  + P V TY + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI-EKGIEPTVYTYTLPI 310

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
             LC     +E +E+  RMKK     +  TY + I GL + G +E A  +Y +M++ G+ 
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            + VTYNA+I+  C  G+     +++  M   G L N  +YN +I+GL   G +++A+ +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +E + +        T+  LING     YL K             G + +AA L++ M ++
Sbjct: 431 FEKMLKMGPLPTVVTYNTLING-----YLTK-------------GNVNNAARLLDLMKEN 472

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC+ + +T N L++GF +  KLE+A F F+EM   G +P  VSY  LI+G  K  +   A
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            S +K M E G  P++ +Y+ +INGL +  +   A K+C + +++G  P+V  Y  LI G
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G+ + A +++ +M+KR C+PNL TY++L+ GL + G  D+A      + E    P 
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPT 648

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           + +Y+  + GLC   R  +A + + D   RG  P    ++ L+ A
Sbjct: 649 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 183/592 (30%), Positives = 289/592 (48%), Gaps = 78/592 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  + +N   D A  VF RM +  GC+            LC + + ++A   L  + E
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVK-EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG++P VY+Y   I  L        A+ +   M +RG   NV  Y  LI G  + G    
Sbjct: 297 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 356

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++ +++ E  V PN VTYN +IN LC  GRF   L+++  M+ +    ++ TY   I
Sbjct: 357 AIGLYHKMLKEGLV-PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
            GLC  G++E A  ++ +M++ G     VTYN +I+G+   G +     L ++M   GC 
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 308 -----------------------------------LNVVSYNILIRGLLENGKVDEAISI 332
                                               N VSY  LI G  ++GKVD A+S+
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
            + + E  CN +  ++  +INGL K    ++A +I +++ E G                 
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            GR   A  + + M+K  C  N YT +SL+ G  Q  K + A    + MS  GC PT+ +
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDT 651

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM-ITYSLLINGLCQSKKIDMALKLCCQF 494
           Y+TL++GLC+  RF EA   VK+M E+G+ PD  I YSLLI   C++ ++D ALK+    
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI-AHCKNLEVDHALKIFHSI 710

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
             KGF   +++Y  LI  LC AG+VE+A  L+ NM ++    + + +  L+DGL K G+ 
Sbjct: 711 EAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 770

Query: 555 DKALEIWNHILEER-LRPDIISYNITLKGLCSCSR------MSDAFEFLNDA 599
           D  +++  HI+E +   P+I +Y I  + L    +      ++D  + L D+
Sbjct: 771 DLCMKLL-HIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDS 821



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 242/516 (46%), Gaps = 38/516 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  AL    +R      +  L+H +L+  + P  V + + I EL    +       A
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF----STA 392

Query: 77  LSVIQ-AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           L +     G  S+ +      Q  NEI       LC     EKA      + + G  P V
Sbjct: 393 LKIFHWMEGHGSLANT-----QTYNEIIKG----LCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+ING +  G++  A  + D M E G E +   YN L+ GF K G    A   ++ 
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +V E  + PN V+Y  +I+G  K G+ D  L +  RM++     +  +Y + I+GL K  
Sbjct: 504 MV-ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
               AE++  +MVE G+  + +TY  +IDG CR G+ +  F+++  M ++ CL N+ +Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI GL + GK DEA    E + E  C     T+  L++GLC+                 
Sbjct: 623 SLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCR----------------- 661

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            +GR  +A  LV  M + G   +     SL+    +  ++++A+ +F  +  KG    + 
Sbjct: 662 -KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
            Y  LI  LCK  +  EA +    MLEK W  D I +++L++GL +  ++D+ +KL    
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
             K FTP++  Y IL   L   GK  ++  L   +K
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 272/521 (52%), Gaps = 23/521 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + ++G   +V+    V+ GL ++G +  A+ +  EM  + V  ++V YN LI+G  K   
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKK 194

Query: 186 YMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
              A  +   L ME +  +PN VT   +++GLCK GR DE +E+ + MKK   + D   Y
Sbjct: 195 LKEAVGLL--LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + I G C  GN++  + ++ EM+  GI  + VTY+ ++ G CR G+ KE   +   M  
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   +VV+Y  LI GL ++G+   A+ +  L+ EK     + T+ VL++GLCK G +  
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 364 AIQILNEVEEGGE-----------------GRLADAASLVNRM-DKHGC-KLNAYTCNSL 404
           A +IL  + E G+                 G++ +A  L N M D   C + N +T N L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G  +  +L  A+ + ++M +KG    +V+YN L+ G  K  +  EA    K++L+ G+
Sbjct: 433 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+  TYS+LI+G C+ + +++A  L C+    G  P +  YN L+  LC  G +E A  
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 552

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+  M   NC P+++++NT++DG  K GD     E+   ++E  LRPD ++++  +  L 
Sbjct: 553 LFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS 612

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
               + +A   L   +  G  P  + +  L++ + + G +T
Sbjct: 613 KLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 250/527 (47%), Gaps = 22/527 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR     +A   +  +  K + PD+ SY T+INGL K+  L  A+ +  EM   G   N
Sbjct: 154 LCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 213

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V    L+DG  K G    A E+ E +  +     +VV Y  +I+G C  G  D   E++
Sbjct: 214 SVTCTTLMDGLCKDGRMDEAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRGKELF 272

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       +  TY   +HGLC+ G  + A  V   M E GI  D VTY  +IDG C+ 
Sbjct: 273 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 332

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+     +L  +M  KG   + V+YN+L+ GL + G V +A  I  ++ EK   AD  T+
Sbjct: 333 GRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTY 392

Query: 349 GVLINGLCKNGYLNKAIQILNEVEE----------------GG---EGRLADAASLVNRM 389
             L+ GLC  G +++A+++ N + +                GG   EGRL  A  +  +M
Sbjct: 393 NTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM 452

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K G   N  T N L+ G ++A K++ A+ L+K++   G  P   +Y+ LI+G CK+   
Sbjct: 453 VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRML 512

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A     EM   G  P +  Y+ L+  LC+   ++ A  L  +       PD+  +N +
Sbjct: 513 NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM 572

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G   AG  +   +L   M +    P+ +T++TL++ L K G+ D+A      ++    
Sbjct: 573 IDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGF 632

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG-ILPTTITWHILV 615
            PD + Y+  LKGL S    ++    L+    +G +L   I   IL 
Sbjct: 633 TPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 262/521 (50%), Gaps = 28/521 (5%)

Query: 110 LCRK--RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC+K   QF +A    +S  +  L P   +   +++ L +S +   A +V+  M    V 
Sbjct: 47  LCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVL 106

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            +    + LI+ F    D  + +  +    LV++     NV   N+++ GLC+ G   E 
Sbjct: 107 PSFGSLSALIECF---ADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           + +   M +     D  +Y + I+GLCKA  ++ A  +  EM  +G F ++VT   ++DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G++ E  EL E M +KG   +VV Y  LI G   NG +D    +++ +  K  +A+
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  L++GLC+                   G+  +A +++N M +HG   +  T   L
Sbjct: 284 VVTYSCLVHGLCR------------------LGQWKEANTVLNAMAEHGIHPDVVTYTGL 325

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G  +  +  +A+ L   M  KG  P+ V+YN L++GLCK     +A+  ++ M+EKG 
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFL--QKGFTPDVTMYNILIHGLCSAGKVEDA 522
           K D++TY+ L+ GLC   K+D ALKL       +    P+V  +N+LI GLC  G++  A
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 445

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++++  M K+    NLVTYN L+ G  K G   +A+E+W  +L+    P+  +Y+I + G
Sbjct: 446 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            C    ++ A     +    G+ P    ++ L+ ++   G+
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 546



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 258/507 (50%), Gaps = 21/507 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A   L  +   G  P+  +  T+++GL K G +  A+ + + M ++G + +
Sbjct: 189 LCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDAD 248

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI GF   G+  R KE+++ + +   +  NVVTY+ +++GLC+ G++ E   + 
Sbjct: 249 VVLYGTLISGFCNNGNLDRGKELFDEM-LGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M ++    D  TY   I GLCK G    A  +   MVE G     VTYN ++ G C+ 
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNC-NADST 346
           G + + F++  +M  KG   +VV+YN L++GL + GKVDEA+ ++  +   +NC   +  
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRM 389
           T  +LI GLCK G L KA++I  ++ + G                  G++ +A  L  ++
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G   N++T + L++GF +   L  A  LF EM   G +P +  YNTL+  LCK    
Sbjct: 488 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A S  +EM     +PD+I+++ +I+G  ++       +L  + ++ G  PD   ++ L
Sbjct: 548 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I+ L   G++++A      M      P+ + Y++L+ GL   GD  + + + + +  +  
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFL 596
             D    +  L  LC   +  D  E L
Sbjct: 668 VLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 243/479 (50%), Gaps = 33/479 (6%)

Query: 61  LELIE-IQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGI 109
           +EL+E ++K     DV L  ++I  +  N   D+  ++F  M       N + + C    
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  Q+++A   LN++ E G+ PDV +Y  +I+GL K G    A+ + + M E+G E +
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+L+ G  K+G  + A +I  R+++E     +VVTYN ++ GLC  G+ DE L+++
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKIL-RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 412

Query: 230 DRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + M  NE   E + FT+   I GLCK G +  A +++R+MV+ G   + VTYN ++ G  
Sbjct: 413 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 472

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +AGKIKE  ELW +V+      N  +Y+ILI G  +   ++ A  ++  +R    N    
Sbjct: 473 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 532

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  L+  LCK                  EG L  A SL   M    C+ +  + N++++
Sbjct: 533 DYNTLMASLCK------------------EGSLEQAKSLFQEMGNANCEPDIISFNTMID 574

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G ++A   +    L  +M   G  P  ++++TLIN L K+    EA S ++ M+  G+ P
Sbjct: 575 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 634

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           D + Y  L+ GL         + L  Q   KG   D  + + ++  LC + +  D ++L
Sbjct: 635 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 693



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 189/378 (50%), Gaps = 21/378 (5%)

Query: 248 IHGLCKAGNVEGAERV--YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           +  LC+  N +  E V  +   ++  +     T N ++D   R+      F ++  M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
             L +  S + LI    +  K      +  L+ ++    +     +++ GLC+NG + +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           + ++ E+     GR + +  +V+              N+L+NG  +A KL+ A+ L  EM
Sbjct: 164 MGLIREM-----GRKSVSPDIVSY-------------NTLINGLCKAKKLKEAVGLLLEM 205

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              GC P  V+  TL++GLCK  R  EA   ++ M +KG+  D++ Y  LI+G C +  +
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D   +L  + L KG + +V  Y+ L+HGLC  G+ ++A  + + M +    P++VTY  L
Sbjct: 266 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G    A+++ N ++E+   P  ++YN+ L GLC    + DAF+ L   + +G 
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385

Query: 605 LPTTITWHILVRAVMNNG 622
               +T++ L++ + + G
Sbjct: 386 KADVVTYNTLMKGLCDKG 403



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 127/244 (52%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A S+  RM       +  + ++L+  F  A K +    +   + ++G +  V   N ++ 
Sbjct: 93  AFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLK 152

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+     EA   ++EM  K   PD+++Y+ LINGLC++KK+  A+ L  +    G  P
Sbjct: 153 GLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFP 212

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +      L+ GLC  G++++A++L   MKK+    ++V Y TL+ G    G+ D+  E++
Sbjct: 213 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 272

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + +L + +  ++++Y+  + GLC   +  +A   LN     GI P  +T+  L+  +  +
Sbjct: 273 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 332

Query: 622 GAST 625
           G +T
Sbjct: 333 GRAT 336


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/625 (28%), Positives = 315/625 (50%), Gaps = 34/625 (5%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL--EL 63
           K +  +LK +K+P  AL +F+   RE G+ HS   +  I+++L      V +  +L    
Sbjct: 8   KHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETR 67

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKR 114
           ++I      E V +  +++YG+     +A+DVF+RM + + CE           IL    
Sbjct: 68  MDIDNSLL-EGVYIGAMKSYGRKGKVQEAVDVFERM-DFYNCEPSVLSYNAIMNILVESG 125

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            F++A +    +   G+ PDVY++   I    ++     AL + + M  +G + N V Y 
Sbjct: 126 YFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYC 185

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++ GF+++   + A E++  + +   ++P+V T+N +++ LCK G   E   + +++ K
Sbjct: 186 TVVAGFYEENYRVEAYELFNDM-LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK 244

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                + FT+  FI GLC+ G + GA  +   ++  G+  D VTYN +I G C+   + E
Sbjct: 245 KGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVE 304

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +    +   G   +  +YN LI G  + G +  A  I +    K    D  T+  LIN
Sbjct: 305 AEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLIN 364

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GLC+N  +++A+ + N             A+L       G K      N L+ G  Q   
Sbjct: 365 GLCQNDEIDRALALFN-------------AAL-----GKGLKPTVILYNMLIKGLCQEGL 406

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +  A+ +  EMS  GCS  + +YN +INGLCK+    +A + + + + KG+ PD+ T++ 
Sbjct: 407 ILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNT 466

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G C+  K++  +++  +    G TPDV  YN +++GL  A K ED ++ +  M ++ 
Sbjct: 467 LIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG 526

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           CVPN +TYN L + L K G  ++AL++ + IL + + PD +S+   + G  +   +  A+
Sbjct: 527 CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAY 586

Query: 594 E-FLNDALCRGILPTTITWHILVRA 617
           + F        +  TT T++I++ A
Sbjct: 587 QLFRRMGEQYKVSHTTATYNIMINA 611



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 62/494 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCRK     A   L+S+  +GL PDV +Y T+I GL K+ +++ A     ++   G+E +
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------------------------------- 197
              YN LIDG+ K G    A++I +  +                                
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFN 380

Query: 198 --METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             +   + P V+ YN++I GLC+ G   + L+M + M +N    D +TY   I+GLCK G
Sbjct: 381 AALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMG 440

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            V  A  +  + +  G   D  T+N +IDG+C+  K++   ++   M   G   +V++YN
Sbjct: 441 CVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYN 500

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ GL +  K ++ +  +E + EK C  +  T+ +L   LCK G +N+A+ +++E+   
Sbjct: 501 SVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNK 560

Query: 375 G-----------------EGRLADAASLVNRM-DKHGCKLNAYTCNSLMNGFIQASKLEN 416
           G                  G L  A  L  RM +++       T N ++N F +   L  
Sbjct: 561 GITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHM 620

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
              LF EM   GC+P   +Y  +I+G C        Y F+ EM+EKG+ P + T+  +IN
Sbjct: 621 GEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVIN 680

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK--VEDALQLYSNMKKRNC 534
            LC   ++  A+ +    +  G  P+V      ++ +  A K  V     +  ++ KR+C
Sbjct: 681 CLCVQHRVHEAVDIIHFMVHNGIVPEV------VNSISEADKKVVAAPKIVVEDLLKRSC 734

Query: 535 VPNLVTYNTLMDGL 548
           +     Y  L DG+
Sbjct: 735 I-TYYAYELLYDGI 747


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 295/577 (51%), Gaps = 30/577 (5%)

Query: 75  VALSVIQAYGKNSMPDKALD-VFQRMNEIFGCEA---------GILCRKRQFEKAKRFLN 124
           V  S + +Y    + D A+D +  ++  +FG +A          +L    + +  +   +
Sbjct: 19  VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 78

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +  +G+KPDV ++ T++  L ++  +  A+ + +EM  RGV  +   +  L+ GF ++G
Sbjct: 79  EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 138

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A  +  R+ +E       VT NV+ING CK GR ++ L    +   +  E D  TY
Sbjct: 139 SIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            +F++GLC+  +V  A +V   MV+ G   D  TYN +++  C+ G+++E   +   M  
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 257

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           +GCL ++ ++N LI  L    +++EA+ +   +  K  + D  T  +LIN LCK G  + 
Sbjct: 258 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 317

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           A+++  E++  G                  G+L  A  L+  M+  GC  +  T N++++
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +  ++E A  +F +M  +G S   +++NTLI+GLCK ++  +A+  + +M+ +G +P
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQP 437

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + ITY+ ++   C+   I  A  +       GF  DV  Y  LI+GLC AG+ + AL++ 
Sbjct: 438 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 497

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC-S 585
             M+ +   P    YN ++  LF+  +   AL ++  + E    PD ++Y I  +GLC  
Sbjct: 498 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 557

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + +AF+F+ + + +G +P   ++ +L   ++N G
Sbjct: 558 GGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 247/539 (45%), Gaps = 59/539 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  Q   A   L  +  +G+ PD  ++ T++ G V+ G +  AL V   M E G    
Sbjct: 99  LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 158

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V  N+LI+G+ K G    A    ++ + +    P+ +TYN  +NGLC+       L++ 
Sbjct: 159 KVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVM 217

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +   + D FTY   ++ LCK G +E A+ +  +MV+ G   D  T+N +I   C  
Sbjct: 218 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +++E  +L   +  KG   +V ++NILI  L + G    A+ ++E ++   C  D  T+
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI+ LC  G L KA+ +L ++E  G                 + R+ +A  + ++MD 
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 397

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   NA T N+L++G  +  K+++A  L  +M  +G  P  ++YN+++   CK     +
Sbjct: 398 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK---------------------- 489
           A   ++ M   G++ D++TY  LINGLC++ +  +ALK                      
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517

Query: 490 -------------LCCQFLQKGFTPDVTMYNILIHGLC-SAGKVEDALQLYSNMKKRNCV 535
                        L  +  + G  PD   Y I+  GLC   G +++A      M  +  +
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAF 593
           P   ++  L +GL   G  D  +     I+E+  LR   +S    ++G     +  DA 
Sbjct: 578 PEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVS---AIRGYLKIRKFYDAL 633



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 152/335 (45%), Gaps = 33/335 (9%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI-EI 66
           L+N L    +PH AL LF+   +  G       ++ ++  L     +  + + L+L+ ++
Sbjct: 305 LINALCKVGDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCS---LGKLGKALDLLKDM 360

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSL 126
           +   CP             N++ D                   LC+K + E+A+   + +
Sbjct: 361 ESTGCPR-------STITYNTIIDG------------------LCKKMRIEEAEEVFDQM 395

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
             +G+  +  ++ T+I+GL K   +  A  + ++M   G++ N + YN ++  + K+GD 
Sbjct: 396 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 455

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            +A +I E +        +VVTY  +INGLCK GR    L++   M+          Y  
Sbjct: 456 KKAADILETMT-ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR-AGKIKECFELWEVMGRK 305
            +  L +  N+  A  ++REM E G   DA+TY  +  G CR  G IKE F+    M  K
Sbjct: 515 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           G +    S+ +L  GLL  G  D  I   E++ EK
Sbjct: 575 GFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 609



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 537 NLVTYNTLMDGLFKTGDCDKALE-IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           + V YN L++ L + G   K LE +++ +    ++PD++++N  +K LC   ++  A   
Sbjct: 53  DTVVYNHLLNVLVE-GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 111

Query: 596 LNDALCRGILPTTITWHILVRAVMNNGA 623
           L +   RG+ P   T+  L++  +  G+
Sbjct: 112 LEEMSSRGVAPDETTFTTLMQGFVEEGS 139


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 262/505 (51%), Gaps = 23/505 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R  + E+  +FL ++   G  PD+    T+I G  + G    A  + + +   G   +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN++I G+ K G+   A  + +R+    SV P+VVTYN ++  LC  G+  + +E+ 
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM + +   D  TY   I   C+   V  A ++  EM + G   D VTYN +++G C+ 
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +    M   GC  NV+++NI++R +   G+  +A  +   +  K  +    T 
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L +AI IL                   +M +HGC+ N+ + N L++GF
Sbjct: 348 NILINFLCRKGLLGRAIDILE------------------KMPQHGCQPNSLSYNPLLHGF 389

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ AI   + M  +GC P +V+YNT++  LCK  +  +A   + ++  KG  P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL ++ K   A+KL  +   K   PD   Y+ L+ GL   GKV++A++ +  
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            ++    PN VT+N++M GL K+   D+A++    ++    +P+  SY I ++GL     
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569

Query: 589 MSDAFEFLNDALCRGILPTTITWHI 613
             +A E LN+   +G++  +    +
Sbjct: 570 AKEALELLNELCNKGLMKKSSAEQV 594



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 238/437 (54%), Gaps = 23/437 (5%)

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             + G+     +  E +V   +V P+++    +I G C+ G+  +  ++ + ++ +    
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D  TY   I G CKAG +  A  V   M    +  D VTYN ++   C +GK+K+  E+ 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M ++ C  +V++Y ILI     +  V  A+ + + +R++ C  D  T+ VL+NG+CK 
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G L++AI+ LN+                  M   GC+ N  T N ++       +  +A 
Sbjct: 288 GRLDEAIKFLND------------------MPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M RKG SP+VV++N LIN LC+    G A   +++M + G +P+ ++Y+ L++G 
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+ KK+D A++   + + +G  PD+  YN ++  LC  GKVEDA+++ + +  + C P L
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           +TYNT++DGL K G   KA+++ + +  + L+PD I+Y+  + GL    ++ +A +F ++
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 599 ALCRGILPTTITWHILV 615
               GI P  +T++ ++
Sbjct: 510 FERMGIRPNAVTFNSIM 526



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 211/416 (50%), Gaps = 20/416 (4%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V  N  +  + + G  +E  +  + M  +    D     + I G C+ G    A ++   
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           +  SG   D +TYN MI G+C+AG+I     + + M      +VV+YN ++R L ++GK+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKL 220

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A+ + + + +++C  D  T+ +LI   C++  +  A+++L+E                
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE---------------- 264

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   GC  +  T N L+NG  +  +L+ AI    +M   GC P V+++N ++  +C  
Sbjct: 265 --MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R+ +A   + +ML KG+ P ++T+++LIN LC+   +  A+ +  +  Q G  P+   Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N L+HG C   K++ A++    M  R C P++VTYNT++  L K G  + A+EI N +  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +   P +I+YN  + GL    +   A + L++   + + P TIT+  LV  +   G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 199/378 (52%), Gaps = 22/378 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  + + G +E   +    MV  G   D +    +I GFCR GK ++  ++ E++   G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + +V++YN++I G  + G+++ A+S+ + +   + + D  T+  ++  LC +G L +A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L+                  RM +  C  +  T   L+    + S + +A+ L  EM  
Sbjct: 226 VLD------------------RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +GC+P VV+YN L+NG+CK  R  EA  F+ +M   G +P++IT+++++  +C + +   
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A KL    L+KGF+P V  +NILI+ LC  G +  A+ +   M +  C PN ++YN L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  K    D+A+E    ++     PDI++YN  L  LC   ++ DA E LN    +G  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 607 TTITWHILVRAVMNNGAS 624
             IT++ ++  +   G +
Sbjct: 448 VLITYNTVIDGLAKAGKT 465



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 14/347 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI--- 109
           V H  ++L+ +  + C  P+ V  +V +    K    D+A+     M    GC+  +   
Sbjct: 255 VGHAMKLLDEMRDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITH 312

Query: 110 ------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                 +C   ++  A++ L  +  KG  P V ++  +IN L + G L  A+ + ++M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            G + N + YN L+ GF K+    RA E  ER+V     YP++VTYN M+  LCK G+ +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           + +E+ +++          TY + I GL KAG    A ++  EM    +  D +TY++++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
            G  R GK+ E  + +    R G   N V++N ++ GL ++ + D AI     +  + C 
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            + T++ +LI GL   G   +A+++LNE+   G  + + A  +  +M
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 253/453 (55%), Gaps = 21/453 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ Y++  V+    K G L     +F++M + G+  + + YNILIDG+ KKG    A  +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +E +V    + P++ TYN ++N  CK  +  E +E++  M +   E D  TY + I GLC
Sbjct: 66  YEEMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 253 KAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           K G V E  E ++ +M+E G   + V YNA+I+G C+   I+  ++L E M  KG + + 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           ++YN ++ GL   GKV EA   ++ +  +  + D   +  L++ L K G  ++A+++  +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           V    +G + D                  T NS++ G  + S ++ A  +FK+M   GC+
Sbjct: 245 VI--AKGYMPDTV----------------TYNSILLGLARKSNMDEAEEMFKKMVASGCA 286

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   +Y+ +++G C+ ++  +A+  ++EM + G  PD++TY++L++GLC++  +D A +L
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 346

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               +  G  PD+  Y+++++GLC   KV DA  L+  M +R  VP++VT+N LMDGL K
Sbjct: 347 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            G  D+A ++ + +      PD ++YN  + GL
Sbjct: 407 AGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 241/438 (55%), Gaps = 19/438 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN  T+ V++   CK G+  +  +++++M  N    D   Y   I G  K G V+ A R+
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           Y EMV  G+     TYN++++ FC+  K+KE  EL++ M  KG   +VV+Y+ +I GL +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 323 NGKVDEAIS-IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----- 376
            GKV EA+  ++  + E+ C+A++  +  LINGLCK+  + +A ++L E+   G      
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 377 ------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                       G++++A    + M   G   +    N L++   +  K + A+ LFK++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             KG  P  V+YN+++ GL +     EA    K+M+  G  P+  TYS++++G C++KK+
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A K+  +  + G  PDV  YNIL+ GLC    V+ A +L+S M    C P++V+Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++GL KT     A  +++ ++E +L PD++++NI + GLC   ++ +A + L+   C G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 605 LPTTITWHILVRAVMNNG 622
            P  + ++ L+  +   G
Sbjct: 426 APDYVAYNTLMNGLRKQG 443



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 221/434 (50%), Gaps = 23/434 (5%)

Query: 104 GCEAGIL----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           G E  IL     +K + ++A R    +   GL+P +Y+Y +++N   K   +  A+ +F 
Sbjct: 43  GIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFK 102

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M E+G E +VV Y+ +I G  K G    A E+    ++E     N V YN +INGLCK 
Sbjct: 103 TMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKD 162

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
              +   ++ + M       D+ TY + + GLC+ G V  A++ +  M   G   D V Y
Sbjct: 163 ENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAY 222

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N ++D   + GK  E  +L++ +  KG + + V+YN ++ GL     +DEA  +++ +  
Sbjct: 223 NGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVA 282

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
             C  +  T+ ++++G C+   ++ A ++L E                  M K G   + 
Sbjct: 283 SGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE------------------MSKIGAVPDV 324

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T N L++G  + + ++ A  LF  M   GC+P +VSY+ ++NGLCK  +  +A      
Sbjct: 325 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 384

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+E+   PD++T+++L++GLC++ K+D A  L  Q    G  PD   YN L++GL   G+
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444

Query: 519 VEDALQLYSNMKKR 532
              A +L   MK++
Sbjct: 445 HIQADRLTQAMKEK 458



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 221/435 (50%), Gaps = 31/435 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I  Y K    D+A  +++ M  + G E  I          C++ + ++A     ++ EK
Sbjct: 49  LIDGYAKKGRVDEANRLYEEMVSV-GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALA-VFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           G +PDV +Y T+I+GL K+G +  AL  +F +M ERG   N V YN LI+G  K  +  R
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++ E +  +  V P+ +TYN +++GLC+ G+  E  + +D M       D   Y   +
Sbjct: 168 AYKLLEEMASKGYV-PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLL 226

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
             L K G  + A +++++++  G   D VTYN+++ G  R   + E  E+++ M   GC 
Sbjct: 227 DALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCA 286

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N  +Y+I++ G     KVD+A  + E + +     D  T+ +L++GLCK   ++KA + 
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE- 345

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                            L + M  +GC  +  + + ++NG  + +K+ +A  LF  M  +
Sbjct: 346 -----------------LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P VV++N L++GLCK  +  EA   + +M   G  PD + Y+ L+NGL +  +   A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448

Query: 488 LKLCCQFLQKGFTPD 502
            +L     +KGF  D
Sbjct: 449 DRLTQAMKEKGFLSD 463



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 127/232 (54%), Gaps = 1/232 (0%)

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N YT   ++  F +  KL +   LF++M   G SP  + YN LI+G  K  R  EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +EM+  G +P + TY+ L+N  C+  K+  A++L     +KGF PDV  Y+ +I GL
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 514 CSAGKVEDALQ-LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           C  GKV +AL+ L+  M +R C  N V YN L++GL K  + ++A ++   +  +   PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            I+YN  L GLC   ++S+A +F +    RG  P  + ++ L+ A+   G +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 154/317 (48%), Gaps = 12/317 (3%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            ++   L+N L  ++N   A  L +    + GY      ++ IL  L     V    +  
Sbjct: 149 TVAYNALINGLCKDENIERAYKLLEEMASK-GYVPDNITYNTILSGLCRMGKVSEAKQFF 207

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQR------MNEIFGCEAGIL--CR 112
           + +   + Y P+ VA + ++ A  K    D+A+ +F+       M +     + +L   R
Sbjct: 208 DSMP-SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K   ++A+     +   G  P+  +Y  V++G  ++  +  A  V +EM + G   +VV 
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YNIL+DG  K     +A E++  +V +    P++V+Y+V++NGLCK  +  +   ++DRM
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            + +   D  T+   + GLCKAG ++ A+ +  +M  SG   D V YN +++G  + G+ 
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445

Query: 293 KECFELWEVMGRKGCLN 309
            +   L + M  KG L+
Sbjct: 446 IQADRLTQAMKEKGFLS 462



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 16/253 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   LL+ L  E     A+ LF     + GY      ++ IL  L     +     + 
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMF 277

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------LCR 112
           + +    C  P     S V+  + +    D A  V + M++I      +        LC+
Sbjct: 278 KKMVASGC-APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 336

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
               +KA    +++ + G  PD+ SY  V+NGL K+  +  A  +FD M ER +  +VV 
Sbjct: 337 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 396

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +NIL+DG  K G    AK++ +++   +   P+ V YN ++NGL K GR  +     DR+
Sbjct: 397 FNILMDGLCKAGKLDEAKDLLDQMTC-SGCAPDYVAYNTLMNGLRKQGRHIQA----DRL 451

Query: 233 KKNEREKDSFTYC 245
            +  +EK   + C
Sbjct: 452 TQAMKEKGFLSDC 464



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 59/126 (46%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           +P+   + +++   C  GK+ D  +L+  M      P+ + YN L+DG  K G  D+A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  ++   L P I +YN  L   C  ++M +A E       +G  P  +T+  ++  + 
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 620 NNGAST 625
             G  T
Sbjct: 125 KTGKVT 130



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 41/86 (47%)

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R C PN  T+  ++    K G      +++  +L+  + PD I YNI + G     R+ +
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
           A     + +  G+ P+  T++ L+ A
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNA 87


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 284/543 (52%), Gaps = 31/543 (5%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAG------ILCRKRQF---EKAKRFLNSLWEKG 130
           I+++ +   P  AL + + M  + GC +       ++    +F   ++A+   + + E  
Sbjct: 232 IKSFCRTGRPYAALRLLRNM-PVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L PDV ++  +++ L K G +L +  +FD++ +RGV  N+  +NI I G  K+G   RA 
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +    V    + P+VVTYN +I GLC+  R  E  E   +M     E + FTY S I G
Sbjct: 351 RLLG-CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLN 309
            CK G V  A R+ ++ V  G   D  TY ++++GFC+ G   +   ++ + +G+    +
Sbjct: 410 YCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           ++ YN LI+GL + G +  A+ +   + EK C  D  T+ ++INGLCK G L        
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL-------- 521

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                     +DA  L+      GC  + +T N+L++G+ +  KL++AI L   M  +G 
Sbjct: 522 ----------SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P V++YNTL+NGLCK  +  E     K M EKG  P++ITY+ +I  LC SKK++ A+ 
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-TYNTLMDGL 548
           L  +   KG TPDV  +  LI G C  G ++ A  L+  M+K+  V +   TYN ++   
Sbjct: 632 LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAF 691

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            +  +   AL +++ + +    PD  +Y + + G C    ++  ++FL + + +G +P+ 
Sbjct: 692 SEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSL 751

Query: 609 ITW 611
            T+
Sbjct: 752 TTF 754



 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 166/561 (29%), Positives = 291/561 (51%), Gaps = 41/561 (7%)

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQFEKAKRFL 123
           E V +  ++ YG+     +A+D F+RM ++F C+           IL     F +A +  
Sbjct: 155 EGVYVEAMRFYGRKGKIQEAVDTFERM-DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVY 213

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + +K ++ DVY+Y   I    ++G    AL +   M   G  +N V Y  ++ GF++ 
Sbjct: 214 MRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEF 273

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           GD  RA+E+++ + +E  + P+V T+N +++ LCK G   E   ++D++ K     + FT
Sbjct: 274 GDNDRARELFDEM-LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFT 332

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           +  FI GLCK G+++ A R+   +   G+  D VTYN +I G CR  ++ E  E    M 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             G   N  +YN +I G  + G V +A  I +    K    D  T+  L+NG C++G  +
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A+ +  +    G G+              G + +    N+L+ G  Q   +  A+ L  
Sbjct: 453 QAMAVFKD----GLGK--------------GLRPSIIVYNTLIKGLCQQGLILPALQLMN 494

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM+ KGC P + +YN +INGLCK+    +A   + + + KG  PD+ TY+ L++G C+  
Sbjct: 495 EMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQL 554

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+D A++L  +   +G TPDV  YN L++GLC   K E+ ++++  M ++ C PN++TYN
Sbjct: 555 KLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYN 614

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           T+++ L  +   ++A+++   +  + L PD++S+   + G C    +  A+      L R
Sbjct: 615 TIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY-----GLFR 669

Query: 603 G------ILPTTITWHILVRA 617
           G      +  TT T++I++ A
Sbjct: 670 GMEKQYDVSHTTATYNIIISA 690



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 265/520 (50%), Gaps = 34/520 (6%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF------ 181
           ++G K  +++Y +++  L       G    F+EM     E      N L++G +      
Sbjct: 112 KQGFKHTLFTYKSMLQKL-------GFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRF 164

Query: 182 --KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             +KG    A + +ER+ +  +  P+V +YN ++N L + G F++  +++ RMK  + E 
Sbjct: 165 YGRKGKIQEAVDTFERMDL-FNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVES 223

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D +TY   I   C+ G    A R+ R M   G F +AV Y  ++ GF   G      EL+
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 300 EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M     C +V ++N L+  L + G V E+  +++ + ++    +  T  + I GLCK 
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 359 GYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTC 401
           G L++A+++L  V   G                 + R+ +A   +++M   G + N +T 
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NS+++G+ +   + +A  + K+   KG  P   +Y +L+NG C+     +A +  K+ L 
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG +P +I Y+ LI GLCQ   I  AL+L  +  +KG  PD+  YN++I+GLC  G + D
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A  L  +   + C+P++ TYNTL+DG  +    D A+E+ N +  + + PD+I+YN  L 
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           GLC  ++  +  E       +G  P  IT++ ++ ++ N+
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 201/398 (50%), Gaps = 27/398 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K     A R L     KG KPD ++Y +++NG  + GD   A+AVF +   +G+  ++
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + YN LI G  ++G  + A ++   +  E    P++ TYN++INGLCK G    CL   +
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMA-EKGCKPDIWTYNLIINGLCKMG----CLSDAN 525

Query: 231 RMKKNEREK----DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  +   K    D FTY + + G C+   ++ A  +   M   G+  D +TYN +++G 
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+  K +E  E+++ M  KGC  N+++YN +I  L  + KV+EA+ +   ++ K    D 
Sbjct: 586 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDV 645

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            + G LI G CK G L+ A  +   +E+                 ++       T N ++
Sbjct: 646 VSFGTLITGFCKVGDLDGAYGLFRGMEK-----------------QYDVSHTTATYNIII 688

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           + F +   ++ A+ LF EM + GC P   +Y  LI+G CK     + Y F+ E +EKG+ 
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           P + T+  ++N LC   K+  A+ +    +QK   PD 
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 17/313 (5%)

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           + +Y  +++ L  +GK +E   +  LL E   N D+T    L+ G+    Y+ +A++   
Sbjct: 119 LFTYKSMLQKLGFHGKFNE---MENLLSEMRSNLDNT----LLEGV----YV-EAMRFY- 165

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
               G +G++ +A     RMD   C  + Y+ N++MN  ++      A  ++  M  K  
Sbjct: 166 ----GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              V +Y   I   C+  R   A   ++ M   G   + + Y  ++ G  +    D A +
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + L+    PDVT +N L+H LC  G V ++ +L+  + KR   PNL T+N  + GL 
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D+A+ +   +  E LRPD+++YN  + GLC  SR+ +A E L+  +  G  P   
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 610 TWHILVRAVMNNG 622
           T++ ++      G
Sbjct: 402 TYNSIIDGYCKKG 414



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 52/286 (18%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+ + + A   +N +W +G+ PDV +Y T++NGL K+      + +F  M E+G   N+
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610

Query: 171 VCYNILID-----------------------------------GFFKKGDYMRAKEIWER 195
           + YN +I+                                   GF K GD   A  ++  
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +  V     TYN++I+   +       L ++  MKKN  + D++TY   I G CK G
Sbjct: 671 MEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM------------- 302
           NV    +   E +E G      T+  +++  C   K++E   +  +M             
Sbjct: 731 NVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTI 790

Query: 303 ---GRKGCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNAD 344
               +KG +   +Y  L  G+ +   + +    W  L RE   +AD
Sbjct: 791 FEADKKGHITYHAYEFLYDGVRDKKILKKKHPNWNSLRREPRSSAD 836


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 265/491 (53%), Gaps = 23/491 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVET 168
            C+  Q ++A      + E  + P+  +Y  V+NGL K+     A  V  EM + + V  
Sbjct: 17  FCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAP 75

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++V Y+ +I+GF K+G+  RA EI   +V    + P+VVTY  +++GLC+ G+ D   EM
Sbjct: 76  DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF-VDAVTYNAMIDGFC 287
              MK    E D FT+ + I G C A  V+ A ++Y+E++ S  +  D VTY A+IDGFC
Sbjct: 136 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFC 195

Query: 288 RAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           ++G +++  ++  VM GRK   NVV+Y+ L+ GL + G +D+A+ ++  +  K C  +  
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI+GLC    ++ A  +++E                  M    C  +  + N+L++
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDE------------------MTATCCPPDTVSYNALLD 297

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM-LEKGWK 465
           G+ +  ++E A  LFKEM+ K C P  ++Y  L+ G C   R  EA   ++ M    G  
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD++TYS+++ G  ++K+   A +   + + +   P+   Y+ LI GLC AG+V+ A+++
Sbjct: 358 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEV 417

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
             NM  +   P++ T+N+++  L + GD D+A ++   +    L P +++Y   L+G   
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477

Query: 586 CSRMSDAFEFL 596
             RM  A+E  
Sbjct: 478 TGRMEIAYELF 488



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 72/557 (12%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI-------FGCEAGILCRKRQFEKAKRFLNSLWE-KG 130
           +I  + K +   +AL  F++M E        +      LC+ R   KA   L  + + K 
Sbjct: 13  IIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKS 72

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRA 189
           + PD+ +Y TVING  K G++  A  +  EM  R G+  +VV Y  ++DG  + G   RA
Sbjct: 73  VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRA 132

Query: 190 KE-----------------------------------IWERLVMETSVYPNVVTYNVMIN 214
            E                                   +++ ++  +S  P+VVTY  +I+
Sbjct: 133 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALID 192

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           G CK G  ++ ++M   M+  +   +  TY S +HGLCKAG+++ A  ++R M   G   
Sbjct: 193 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           + VTY  +I G C A K+     L + M    C  + VSYN L+ G    G+++EA  ++
Sbjct: 253 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------------ 375
           + +  K+C  D  T+  L+ G C    L +A  +L  ++                     
Sbjct: 313 KEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 372

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R  +AA  +  M       NA T +SL++G  +A ++++A+ + K M  K   P+V +
Sbjct: 373 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGT 432

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL----- 490
           +N++I  LC++    EA+  +  M   G +P M+TY+ L+ G  ++ ++++A +L     
Sbjct: 433 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492

Query: 491 ---CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
                        P+   ++ LI GLC A +++ A+ +   ++ R C P       ++DG
Sbjct: 493 KKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDG 551

Query: 548 LFKTGDCDKALEIWNHI 564
           L + G  ++A ++ N I
Sbjct: 552 LLRAGRTEEAGKLINSI 568



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 265/567 (46%), Gaps = 78/567 (13%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-V 79
           ALA F+   RE   A +   ++ ++  L   +L      +L+ +   K   P+ V  S V
Sbjct: 26  ALACFEK-MRE-FVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTV 83

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG 130
           I  + K    D+A ++ + M    G    +         LCR  + ++A   +  +  KG
Sbjct: 84  INGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG 143

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV-ETNVVCYNILIDGFFKKGDYMRA 189
           ++PD +++  +I G   +  +  AL ++ E+      + +VV Y  LIDGF K G+  +A
Sbjct: 144 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKA 203

Query: 190 KEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
            ++    VME     PNVVTY+ +++GLCK G  D+ L+++ RM       +  TY + I
Sbjct: 204 MKMLG--VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 261

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLC A  V+ A  +  EM  +    D V+YNA++DG+CR G+I+E  +L++ M  K CL
Sbjct: 262 HGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCL 321

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLR-EKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
            + ++Y  L+RG     +++EA  + E ++     + D  T+ +++ G  +         
Sbjct: 322 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR--------- 372

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      R  +AA  +  M       NA T +SL++G  +A ++++A+ + K M  
Sbjct: 373 ---------AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVN 423

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY--------------- 471
           K   P+V ++N++I  LC++    EA+  +  M   G +P M+TY               
Sbjct: 424 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEI 483

Query: 472 ---------------------------SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                                      S LI GLC++++ID A+ +  +   +   P   
Sbjct: 484 AYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 543

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKK 531
               ++ GL  AG+ E+A +L +++ K
Sbjct: 544 DCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 179/346 (51%), Gaps = 19/346 (5%)

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           VT+  +IDGFC+A ++K+    +E M      N  +YN+++ GL +     +A  + + +
Sbjct: 8   VTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 337 RE-KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           R+ K+   D  T+  +ING CK G +++A +IL E+                 + + G  
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM-----------------VTRDGIA 110

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T  S+++G  +  K++ A  + +EM  KG  P   +++ LI G C   +  EA   
Sbjct: 111 PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 170

Query: 456 VKEML-EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            KE+L    WKPD++TY+ LI+G C+S  ++ A+K+      +   P+V  Y+ L+HGLC
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 230

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            AG ++ AL L+  M  + CVPN+VTY TL+ GL      D A  + + +      PD +
Sbjct: 231 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           SYN  L G C   R+ +A +   +   +  LP  IT+  LVR   N
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 161/294 (54%), Gaps = 19/294 (6%)

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-------------GG--EGRLADAASL 385
           C     T  ++I+G CK   L +A+    ++ E              G  + RL   A  
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 386 VNRMDKHGCKL--NAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLING 442
           V +  + G  +  +  T ++++NGF +  +++ A  + +EM +R G +P VV+Y ++++G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTP 501
           LC+  +   A   V+EM  KG +PD  T+S LI G C ++K+D ALKL  + L    + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y  LI G C +G +E A+++   M+ R CVPN+VTY++L+ GL K GD D+AL+++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             +  +   P++++Y   + GLC+  ++  A   +++       P T++++ L+
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 55/370 (14%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           ++L ++E +KC        S++    K    D+ALD+F+RM    GC   +         
Sbjct: 205 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHG 263

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER----- 164
           LC   + + A+  ++ +      PD  SY  +++G  + G +  A  +F EM  +     
Sbjct: 264 LCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323

Query: 165 -------------------------------GVETNVVCYNILIDGFFKKGDYMRAKEIW 193
                                          G++ +VV Y+I++ G+ +   ++ A E  
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 383

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + ++   +V PN VTY+ +I+GLCK GR D  +E+   M     E    T+ S I  LC+
Sbjct: 384 QEMIAR-NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCR 442

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-----GRKGCL 308
            G+++ A ++   M   G+    VTY  +++GF R G+++  +EL+EVM           
Sbjct: 443 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAA 502

Query: 309 NVV---SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           N+V   +++ LIRGL +  ++D+A+++ E LR + C         +++GL + G   +A 
Sbjct: 503 NLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAG 562

Query: 366 QILNEVEEGG 375
           +++N + + G
Sbjct: 563 KLINSISKVG 572



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 37/231 (16%)

Query: 429 CSPTVV----------------------------------SYNTLINGLCKVERFGEAYS 454
           C PTVV                                  +YN ++NGLCK     +AY 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 455 FVKEMLE-KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHG 512
            +KEM + K   PD++TYS +ING C+  ++D A ++  + + + G  PDV  Y  ++ G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL-EERLRP 571
           LC  GK++ A ++   MK +   P+  T++ L+ G       D+AL+++  IL     +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+++Y   + G C    +  A + L     R  +P  +T+  L+  +   G
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 233



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 6/169 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A   L ++  K ++P V ++ +VI  L + GD+  A  +   M   G+E  
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL---VMETSVYPNVV---TYNVMINGLCKCGRFD 223
           +V Y  L++GF + G    A E++E +     ++S   N+V    ++ +I GLCK    D
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           + + + + ++  E E       + + GL +AG  E A ++   + + G+
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 259/518 (50%), Gaps = 20/518 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR     +A   +  +  K + PD+ SY T+INGL K+  L  A+ +  EM   G   N
Sbjct: 8   LCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 67

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V    L+DG  K G    A E+ E +  +     +VV Y  +I+G C  G  D   E++
Sbjct: 68  SVTCTTLMDGLCKDGRMDEAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRGKELF 126

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       +  TY   +HGLC+ G  + A  V   M E GI  D VTY  +IDG C+ 
Sbjct: 127 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 186

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+     +L  +M  KG   + V+YN+L+ GL + G V +A  I  ++ EK   AD  T+
Sbjct: 187 GRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTY 246

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC-KLNAYTCNSLMNG 407
             L+ GLC  G +++A+++ N +                  D   C + N +T N L+ G
Sbjct: 247 NTLMKGLCDKGKVDEALKLFNSM-----------------FDNENCLEPNVFTFNMLIGG 289

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  +L  A+ + ++M +KG    +V+YN L+ G  K  +  EA    K++L+ G+ P+
Sbjct: 290 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 349

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TYS+LI+G C+ + +++A  L C+    G  P +  YN L+  LC  G +E A  L+ 
Sbjct: 350 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 409

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M   NC P+++++NT++DG  K GD     E+   ++E  LRPD ++++  +  L    
Sbjct: 410 EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 469

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            + +A   L   +  G  P  + +  L++ + + G +T
Sbjct: 470 ELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 235/456 (51%), Gaps = 21/456 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L ++ +KG   DV  YGT+I+G   +G+L     +FDEM  +G+  N
Sbjct: 78  LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 137

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ L+ G  + G +  A  +   +  E  ++P+VVTY  +I+GLCK GR    +++ 
Sbjct: 138 VVTYSCLVHGLCRLGQWKEANTVLNAMA-EHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +   E  + TY   + GLCK G V  A ++ R M+E G   D VTYN ++ G C  
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 256

Query: 290 GKIKECFELWEVM-GRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           GK+ E  +L+  M   + CL  NV ++N+LI GL + G++ +A+ I   + +K    +  
Sbjct: 257 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 316

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRM 389
           T+ +L+ G  K G + +A+++  +V + G            +G      L  A  L   M
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
             HG     +  N+LM    +   LE A  LF+EM    C P ++S+NT+I+G  K   F
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
                   +M+E G +PD +T+S LIN L +  ++D A     + +  GFTPD  +Y+ L
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           + GL S G   + + L   M  +  V +    +T++
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 219/417 (52%), Gaps = 21/417 (5%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N+++ GLC+ G   E + +   M +     D  +Y + I+GLCKA  ++ A  +  EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
           +G F ++VT   ++DG C+ G++ E  EL E M +KG   +VV Y  LI G   NG +D 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
              +++ +  K  +A+  T+  L++GLC+                   G+  +A +++N 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCR------------------LGQWKEANTVLNA 163

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M +HG   +  T   L++G  +  +  +A+ L   M  KG  P+ V+YN L++GLCK   
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL--QKGFTPDVTMY 506
             +A+  ++ M+EKG K D++TY+ L+ GLC   K+D ALKL       +    P+V  +
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N+LI GLC  G++  A++++  M K+    NLVTYN L+ G  K G   +A+E+W  +L+
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               P+  +Y+I + G C    ++ A     +    G+ P    ++ L+ ++   G+
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 400



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 243/479 (50%), Gaps = 33/479 (6%)

Query: 61  LELIE-IQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGI 109
           +EL+E ++K     DV L  ++I  +  N   D+  ++F  M       N + + C    
Sbjct: 88  MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 147

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  Q+++A   LN++ E G+ PDV +Y  +I+GL K G    A+ + + M E+G E +
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+L+ G  K+G  + A +I  R+++E     +VVTYN ++ GLC  G+ DE L+++
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKIL-RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 266

Query: 230 DRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + M  NE   E + FT+   I GLCK G +  A +++R+MV+ G   + VTYN ++ G  
Sbjct: 267 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 326

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +AGKIKE  ELW +V+      N  +Y+ILI G  +   ++ A  ++  +R    N    
Sbjct: 327 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 386

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  L+  LCK                  EG L  A SL   M    C+ +  + N++++
Sbjct: 387 DYNTLMASLCK------------------EGSLEQAKSLFQEMGNANCEPDIISFNTMID 428

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G ++A   +    L  +M   G  P  ++++TLIN L K+    EA S ++ M+  G+ P
Sbjct: 429 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 488

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           D + Y  L+ GL         + L  Q   KG   D  + + ++  LC + +  D ++L
Sbjct: 489 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 547



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 105/189 (55%)

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N ++ GLC+     EA   ++EM  K   PD+++Y+ LINGLC++KK+  A+ L  +   
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P+      L+ GLC  G++++A++L   MKK+    ++V Y TL+ G    G+ D+
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
             E+++ +L + +  ++++Y+  + GLC   +  +A   LN     GI P  +T+  L+ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 617 AVMNNGAST 625
            +  +G +T
Sbjct: 182 GLCKDGRAT 190


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 178/625 (28%), Positives = 306/625 (48%), Gaps = 32/625 (5%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRL-IDPKLVVHVSRILEL 63
            K +  ++K +K+P  AL +F+S  +E G+ H+   +  ++ +L    K       ++++
Sbjct: 7   PKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 66

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKR 114
            E    +  E V +  ++ YG+     +A++VF+RM + + CE           +L    
Sbjct: 67  RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSG 125

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            F++A +    + ++G+ PDVYS+   +    K+     AL + + M  +G E NVV Y 
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++ GF+++       E++ ++ + + V   + T+N ++  LCK G   EC ++ D++ K
Sbjct: 186 TVVGGFYEENFKAEGYELFGKM-LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                + FTY  FI GLC+ G ++GA R+   ++E G   D +TYN +I G C+  K +E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
                  M  +G   +  +YN LI G  + G V  A  I           D  T+  LI+
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GLC  G  N+A+ + NE                      G K N    N+L+ G      
Sbjct: 365 GLCHEGETNRALALFNEAL------------------GKGIKPNVILYNTLIKGLSNQGM 406

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +  A  L  EMS KG  P V ++N L+NGLCK+    +A   VK M+ KG+ PD+ T+++
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G     K++ AL++    L  G  PDV  YN L++GLC   K ED ++ Y  M ++ 
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PNL T+N L++ L +    D+AL +   +  + + PD +++   + G C    +  A+
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586

Query: 594 E-FLNDALCRGILPTTITWHILVRA 617
             F        +  +T T++I++ A
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHA 611



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 220/441 (49%), Gaps = 28/441 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    + A+R +      G  PD ++Y ++I+GL   G+   ALA+F+E   +G++ NV
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + YN LI G   +G  + A ++   +  E  + P V T+N+++NGLCK G   +   +  
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMS-EKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       D FT+   IHG      +E A  +   M+++G+  D  TYN++++G C+  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K ++  E ++ M  KGC  N+ ++NIL+  L    K+DEA+ + E ++ K+ N D+ T G
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CKNG L+ A  +  ++EE                  +    +  T N +++ F 
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEA-----------------YKVSSSTPTYNIIIHAFT 613

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   +  A  LF+EM  +   P   +Y  +++G CK       Y F+ EM+E G+ P + 
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ--LYS 527
           T   +IN LC   ++  A  +  + +QKG  P+       ++ +C   K E A    +  
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLE 727

Query: 528 NMKKRNCVPNLVTYNTLMDGL 548
           ++ K++C+     Y  L DGL
Sbjct: 728 DLLKKSCI-TYYAYELLFDGL 747



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 127/249 (51%)

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
           G +G++ +A ++  RMD + C+   ++ N++M+  + +   + A  ++  M  +G +P V
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            S+   +   CK  R   A   +  M  +G + +++ Y  ++ G  +        +L  +
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L  G +  ++ +N L+  LC  G V++  +L   + KR  +PNL TYN  + GL + G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D A+ +   ++E+  +PD+I+YN  + GLC  S+  +A  +L   +  G+ P + T++ 
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 614 LVRAVMNNG 622
           L+      G
Sbjct: 327 LIAGYCKGG 335


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 270/514 (52%), Gaps = 27/514 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q   A   L  +   GLKPD  ++ T++ G ++ GDL GAL +  +M   G    
Sbjct: 168 LCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLT 227

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS---VYPNVVTYNVMINGLCKCGRFDECL 226
            V   +L++GF K+G   R +E   R V+E S     P+ VT+N ++NG C+ G  ++ L
Sbjct: 228 NVSVKVLVNGFCKEG---RVEEAL-RFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 283

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++ D M +   + D +TY S I G+CK G  E A  + ++M+      + VTYN +I   
Sbjct: 284 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+  +I+   +L  ++  KG L +V ++N LI+GL  +   D A+ ++E ++ K C  D 
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ +LI+ LC                   E RL +A  L+  M+  GC  NA   N+L+
Sbjct: 404 FTYSILIDSLCY------------------ERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  ++ ++E+A  +F +M   G S + V+YNTLI+GLCK +R  EA   + +M+ +G K
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD  TY+ L+   C+   I+ A  +       G  PD+  Y  LI GLC AG+V+ A +L
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
             +++ +  V     YN ++  LF      + + ++  ++E+   PD +++ I  +GLC+
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCN 625

Query: 586 -CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
               + +A +F  + L +GILP   ++  L   +
Sbjct: 626 GGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 247/507 (48%), Gaps = 22/507 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +   F+     L  L   G  P+  ++ T+I       ++   L + +   E G + +
Sbjct: 65  LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPD 122

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YNI ++   +       + +  ++V E  V  +V T+NV+I  LCK  +    + M 
Sbjct: 123 TNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVL-DVSTFNVLIKALCKAHQLRPAILML 181

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  +  + D  T+ + + G  + G++ GA ++ ++M+  G  +  V+   +++GFC+ 
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241

Query: 290 GKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++E    + EV       + V++N L+ G    G V++A+ I + + EK  + D  T+
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G+CK G   KAI+IL +                  M    C  N  T N+L++  
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQ------------------MILRECSPNTVTYNTLISAL 343

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + +++E A  L + +  KG  P V ++NTLI GLC  +    A    +EM  KG KPD 
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TYS+LI+ LC  +++  AL L  +    G   +  +YN LI GLC + ++EDA +++  
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+      + VTYNTL+DGL K    ++A ++ + ++ E L+PD  +YN  L   C    
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           +  A + +      G  P   T+  L+
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLI 550



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 225/439 (51%), Gaps = 21/439 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ + E+A RF+  + E+G  PD  ++ +++NG  + G++  AL + D M E+G + +
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN LI G  K G++ +A EI +++++     PN VTYN +I+ LCK    +   ++ 
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILR-ECSPNTVTYNTLISALCKENEIEAATDLA 356

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +       D  T+ + I GLC + N + A  ++ EM   G   D  TY+ +ID  C  
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++KE   L + M   GC  N V YN LI GL ++ ++++A  I++ +     +  S T+
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476

Query: 349 GVLINGLCKNGYLNKAIQILNE-VEEGGE----------------GRLADAASLVNRMDK 391
             LI+GLCKN  + +A Q++++ + EG +                G +  A  +V  M  
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +GC+ + +T  +L+ G  +A +++ A  L + +  KG   T  +YN +I  L   +R  E
Sbjct: 537 NGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKE 596

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSK-KIDMALKLCCQFLQKGFTPDVTMYNILI 510
                +EM+EK   PD +T+ ++  GLC     I  A+    + L+KG  P+   +  L 
Sbjct: 597 GMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLA 656

Query: 511 HGLCSAGKVEDALQLYSNM 529
            GLCS   +ED L    NM
Sbjct: 657 EGLCSLS-MEDTLIELINM 674



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 228/477 (47%), Gaps = 22/477 (4%)

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           T++  L +S        +  ++   G   N   +  LI  F    ++   + + + L  E
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSF---TNFHEIENLLKILENE 116

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
               P+   YN+ +N L +  +      +  +M       D  T+   I  LCKA  +  
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRP 176

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A  +  EM   G+  D +T+  ++ GF   G +    ++ + M   GCL   VS  +L+ 
Sbjct: 177 AILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVN 236

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G  + G+V+EA+     + E+  + D  T   L+NG C+ G +N                
Sbjct: 237 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN---------------- 280

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
             DA  +V+ M + G   + YT NSL++G  +  + E AI + ++M  + CSP  V+YNT
Sbjct: 281 --DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+ LCK      A    + ++ KG  PD+ T++ LI GLC SK  D+A+++  +   KG
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   Y+ILI  LC   ++++AL L   M+   C  N V YNTL+DGL K+   + A 
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           EI++ +    +    ++YN  + GLC   R+ +A + ++  +  G+ P   T++ L+
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 209/421 (49%), Gaps = 25/421 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAE 261
           PN  T+  +I         +  L++ +    NE   + D+  Y   ++ L +   ++  E
Sbjct: 88  PNATTFATLIQSFTNFHEIENLLKILE----NELGFKPDTNFYNIALNALVEDNKLKLVE 143

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++ +MV  GI +D  T+N +I   C+A +++    + E M   G   + +++  L++G 
Sbjct: 144 MLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGF 203

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
           +E G ++ A+ + + +    C   + +  VL+NG CK G + +A++ + EV E       
Sbjct: 204 IEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE------- 256

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                       G   +  T NSL+NGF +   + +A+ +   M  KG  P V +YN+LI
Sbjct: 257 -----------EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 305

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G+CK+  F +A   +++M+ +   P+ +TY+ LI+ LC+  +I+ A  L    + KG  
Sbjct: 306 SGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 365

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PDV  +N LI GLC +   + A++++  MK + C P+  TY+ L+D L       +AL +
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +       + + YN  + GLC   R+ DA E  +     G+  +++T++ L+  +  
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 621 N 621
           N
Sbjct: 486 N 486



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 18/176 (10%)

Query: 90  DKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +KA D+ Q M           +G   G LCR  + + A + L S+  KG+    ++Y  V
Sbjct: 525 EKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPV 584

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I  L         + +F EM E+    + + + I+  G    G  ++    +   ++E  
Sbjct: 585 IQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEM----WDRMKKNEREKDSFTYCSFIHGLCK 253
           + P   ++  +  GLC     D  +E+     ++ + +ERE       S I G  K
Sbjct: 645 ILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE------TSMIRGFLK 694


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 311/639 (48%), Gaps = 52/639 (8%)

Query: 14  AEKNPHTA--LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           AE +P  A  L L    +RE  +++ P  F  + RRL+D       +    +  I+ C+ 
Sbjct: 99  AESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVD-ARRYAAAGRARIHLIKSCHS 157

Query: 72  PEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE--------I 102
            E +A     L ++   G                +  M    +D + RM          I
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +      LC+      A+  +  ++E  + PD ++Y ++I G  +  DL  AL VF++M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G E N V Y+ LI+G    G    A ++   +++   + P   T    I  LC  G +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCY 336

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++   ++  MK    E + +TY + I GLC +G ++ A  ++  M   G+F + VTYNA+
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+      +IK  F +  +MGR GC  N+V+YN +I+G    G   +A+ +   + ++  
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           +A+  T+  +I G C +G    A++IL+ + +GG                  CK + ++ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------------------CKPDEWSY 498

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             L+ GF + SK+E+A  LF EM   G  P  V+Y  LI+G CK E+   A S ++ M  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +P++ TY++LI+GL +      A +LC   +++G  P+V  Y  +I GLC  G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL++++ M ++ C+PNL+TY++L+  L + G  ++A  ++  +    L PD I+Y   ++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 ++  AF FL   +  G  PT  T+ +L++ + N
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 250/511 (48%), Gaps = 20/511 (3%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    +   FL+ L + GL+  +++Y  ++  L + G     +  +  M   GV+ N++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN +I+   K G+   A+ I ++ V E+ + P+  TY  MI G C+    D  L+++++M
Sbjct: 218 YNAVINALCKDGNVADAETIMKK-VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   E ++ TY + I+GLC +G V  A  + REM+  GI   A T    I   C  G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++ + L+  M  KGC  NV +Y  LI GL  +G +  AI ++  +       ++ T+  L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           IN L +N  +  A  +LN                   M ++GC  N  T N ++ G+   
Sbjct: 397 INILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
              + A+ +   M ++G S  +V+YNT+I G C       A   +  M + G KPD  +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI G C+  K++ A  L  + +  G  P+   Y  LI G C   K++ A  L  +MK+
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C PN+ TYN L+ GL K  +   A E+   ++EE + P++++Y   + GLC     S 
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A E  N  + +G LP  +T+  L+RA+   G
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 249/573 (43%), Gaps = 79/573 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    +E A R    +  KG +P+VY+Y  +I+GL  SG L  A+ +F  M   GV  N
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 170 VVCYNILID-----------------------------------GFFKKGDYMRAKEIWE 194
            V YN LI+                                   G+   GD  +A  +  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            + ++     N+VTYN +I G C  G     L + D M+    + D ++Y   I G CK 
Sbjct: 450 NM-LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             +E A  ++ EMV+ G+  + VTY A+IDG+C+  K+     L E M R GC  NV +Y
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N+LI GL +      A  + +++ E+    +  T+  +I+GLCKNG  + A+++ N    
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---- 624

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                         +M + GC  N  T +SL+    Q  K+E A  LF E+ R G  P  
Sbjct: 625 --------------KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL--------------- 478
           ++Y  +I       +   A++F+  M++ G +P + TY +LI GL               
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 479 ---------CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
                     Q+   D    +  +  +      V + N L+  L +AG+  +A +L  +M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +   P+   YN+L+  L +  + D A+ ++ H+  +     +  Y   +  LC   R 
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A     + L R   P  +   +L+  ++ +G
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 248/563 (44%), Gaps = 75/563 (13%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LFH + R  + P  V + + I  L+E ++       A  V+   G+N             
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRI----KYAFVVLNLMGRN------------- 419

Query: 100 NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
               GC   I+         C     +KA   +N++ ++G   ++ +Y T+I G   SG+
Sbjct: 420 ----GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
              AL + D M + G + +   Y  LI GF K      A  ++  +V +  + PN VTY 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV-DDGLCPNEVTYT 534

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+G CK  + D    + + MK++    +  TY   IHGL K  N  GAE + + M+E 
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 594

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GIF + VTY AMIDG C+ G      E++  M  +GCL N+++Y+ LIR L + GKV+EA
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            +++  L       D  T+  +I     +G +  A   L                   RM
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG------------------RM 696

Query: 390 DKHGCKLNAYTCNSLMNG----FIQASK--------LENAIFLFKEMSRKGCS------- 430
            K GC+   +T   L+ G    ++ A +        + N  F ++   +   S       
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 431 ---P--TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
              P  +V   N L++ L    R+ EA   +  M+ +G  PD   Y+ L+  L + + +D
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A+ +      +G    +  Y  LI  LC   + ++A   + NM  R   P+ V    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 546 DGLFKTGDCDKALEIWNHILEER 568
           DGL + G  D  +E   HI+E R
Sbjct: 877 DGLLRDGYKDLCMEFL-HIMETR 898


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 311/639 (48%), Gaps = 52/639 (8%)

Query: 14  AEKNPHTA--LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           AE +P  A  L L    +RE  +++ P  F  + RRL+D       +    +  I+ C+ 
Sbjct: 99  AESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVD-ARRYAAAGRARIHLIKSCHS 157

Query: 72  PEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE--------I 102
            E +A     L ++   G                +  M    +D + RM          I
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +      LC+      A+  +  ++E  + PD ++Y ++I G  +  DL  AL VF++M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G E N V Y+ LI+G    G    A ++   +++   + P   T    I  LC  G +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCY 336

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++   ++  MK    E + +TY + I GLC +G ++ A  ++  M   G+F + VTYNA+
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+      +IK  F +  +MGR GC  N+V+YN +I+G    G   +A+ +   + ++  
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           +A+  T+  +I G C +G    A++IL+ + +GG                  CK + ++ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------------------CKPDEWSY 498

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             L+ GF + SK+E+A  LF EM   G  P  V+Y  LI+G CK E+   A S ++ M  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +P++ TY++LI+GL +      A +LC   +++G  P+V  Y  +I GLC  G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL++++ M ++ C+PNL+TY++L+  L + G  ++A  ++  +    L PD I+Y   ++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 ++  AF FL   +  G  PT  T+ +L++ + N
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 250/511 (48%), Gaps = 20/511 (3%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    +   FL+ L + GL+  +++Y  ++  L + G     +  +  M   GV+ N++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN +I+   K G+   A+ I ++ V E+ + P+  TY  MI G C+    D  L+++++M
Sbjct: 218 YNAVINALCKDGNVADAETIMKK-VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   E ++ TY + I+GLC +G V  A  + REM+  GI   A T    I   C  G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++ + L+  M  KGC  NV +Y  LI GL  +G +  AI ++  +       ++ T+  L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           IN L +N  +  A  +LN                   M ++GC  N  T N ++ G+   
Sbjct: 397 INILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
              + A+ +   M ++G S  +V+YNT+I G C       A   +  M + G KPD  +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI G C+  K++ A  L  + +  G  P+   Y  LI G C   K++ A  L  +MK+
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C PN+ TYN L+ GL K  +   A E+   ++EE + P++++Y   + GLC     S 
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A E  N  + +G LP  +T+  L+RA+   G
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 247/553 (44%), Gaps = 53/553 (9%)

Query: 104 GCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           GCE  +         LC     + A    + +   G+ P+  +Y  +IN LV++  +  A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
             V + M   G   N+V YN +I G+   GD  +A  +   + ++     N+VTYN +I 
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNTIIK 468

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           G C  G     L + D M+    + D ++Y   I G CK   +E A  ++ EMV+ G+  
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           + VTY A+IDG+C+  K+     L E M R GC  NV +YN+LI GL +      A  + 
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           +++ E+    +  T+  +I+GLCKNG  + A+++ N                  +M + G
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN------------------KMIEQG 630

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T +SL+    Q  K+E A  LF E+ R G  P  ++Y  +I       +   A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 454 SFVKEMLEKGWKPDMITYSLLINGL------------------------CQSKKIDMALK 489
           +F+  M++ G +P + TY +LI GL                         Q+   D    
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 750

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +  +      V + N L+  L +AG+  +A +L  +M  +   P+   YN+L+  L 
Sbjct: 751 MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +  + D A+ ++ H+  +     +  Y   +  LC   R  +A     + L R   P  +
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870

Query: 610 TWHILVRAVMNNG 622
              +L+  ++ +G
Sbjct: 871 VQAVLIDGLLRDG 883



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 248/563 (44%), Gaps = 75/563 (13%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LFH + R  + P  V + + I  L+E ++       A  V+   G+N             
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRI----KYAFVVLNLMGRN------------- 419

Query: 100 NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
               GC   I+         C     +KA   +N++ ++G   ++ +Y T+I G   SG+
Sbjct: 420 ----GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
              AL + D M + G + +   Y  LI GF K      A  ++  +V +  + PN VTY 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV-DDGLCPNEVTYT 534

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+G CK  + D    + + MK++    +  TY   IHGL K  N  GAE + + M+E 
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 594

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GIF + VTY AMIDG C+ G      E++  M  +GCL N+++Y+ LIR L + GKV+EA
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            +++  L       D  T+  +I     +G +  A   L                   RM
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG------------------RM 696

Query: 390 DKHGCKLNAYTCNSLMNG----FIQASK--------LENAIFLFKEMSRKGCS------- 430
            K GC+   +T   L+ G    ++ A +        + N  F ++   +   S       
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 431 ---P--TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
              P  +V   N L++ L    R+ EA   +  M+ +G  PD   Y+ L+  L + + +D
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A+ +      +G    +  Y  LI  LC   + ++A   + NM  R   P+ V    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 546 DGLFKTGDCDKALEIWNHILEER 568
           DGL + G  D  +E   HI+E R
Sbjct: 877 DGLLRDGYKDLCMEFL-HIMETR 898


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 311/639 (48%), Gaps = 52/639 (8%)

Query: 14  AEKNPHTA--LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           AE +P  A  L L    +RE  +++ P  F  + RRL+D       +    +  I+ C+ 
Sbjct: 99  AESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVD-ARRYAAAGRARIHLIKSCHS 157

Query: 72  PEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE--------I 102
            E +A     L ++   G                +  M    +D + RM          I
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +      LC+      A+  +  ++E  + PD ++Y ++I G  +  DL  AL VF++M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G E N V Y+ LI+G    G    A ++   +++   + P   T    I  LC  G +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCY 336

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++   ++  MK    E + +TY + I GLC +G ++ A  ++  M   G+F + VTYNA+
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+      +IK  F +  +MGR GC  N+V+YN +I+G    G   +A+ +   + ++  
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           +A+  T+  +I G C +G    A++IL+ + +GG                  CK + ++ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------------------CKPDEWSY 498

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             L+ GF + SK+E+A  LF EM   G  P  V+Y  LI+G CK E+   A S ++ M  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +P++ TY++LI+GL +      A +LC   +++G  P+V  Y  +I GLC  G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL++++ M ++ C+PNL+TY++L+  L + G  ++A  ++  +    L PD I+Y   ++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 ++  AF FL   +  G  PT  T+ +L++ + N
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 250/511 (48%), Gaps = 20/511 (3%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    +   FL+ L + GL+  +++Y  ++  L + G     +  +  M   GV+ N++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN +I+   K G+   A+ I ++ V E+ + P+  TY  MI G C+    D  L+++++M
Sbjct: 218 YNAVINALCKDGNVADAETIMKK-VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   E ++ TY + I+GLC +G V  A  + REM+  GI   A T    I   C  G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++ + L+  M  KGC  NV +Y  LI GL  +G +  AI ++  +       ++ T+  L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           IN L +N  +  A  +LN                   M ++GC  N  T N ++ G+   
Sbjct: 397 INILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
              + A+ +   M ++G S  +V+YNT+I G C       A   +  M + G KPD  +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI G C+  K++ A  L  + +  G  P+   Y  LI G C   K++ A  L  +MK+
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C PN+ TYN L+ GL K  +   A E+   ++EE + P++++Y   + GLC     S 
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A E  N  + +G LP  +T+  L+RA+   G
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 249/573 (43%), Gaps = 79/573 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    +E A R    +  KG +P+VY+Y  +I+GL  SG L  A+ +F  M   GV  N
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 170 VVCYNILID-----------------------------------GFFKKGDYMRAKEIWE 194
            V YN LI+                                   G+   GD  +A  +  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            + ++     N+VTYN +I G C  G     L + D M+    + D ++Y   I G CK 
Sbjct: 450 NM-LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             +E A  ++ EMV+ G+  + VTY A+IDG+C+  K+     L E M R GC  NV +Y
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N+LI GL +      A  + +++ E+    +  T+  +I+GLCKNG  + A+++ N    
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---- 624

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                         +M + GC  N  T +SL+    Q  K+E A  LF E+ R G  P  
Sbjct: 625 --------------KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL--------------- 478
           ++Y  +I       +   A++F+  M++ G +P + TY +LI GL               
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 479 ---------CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
                     Q+   D    +  +  +      V + N L+  L +AG+  +A +L  +M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +   P+   YN+L+  L +  + D A+ ++ H+  +     +  Y   +  LC   R 
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A     + L R   P  +   +L+  ++ +G
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 247/563 (43%), Gaps = 75/563 (13%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LFH + R  + P  V + + I  L+E ++       A  V+   G+N             
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRI----KYAFVVLNLMGRN------------- 419

Query: 100 NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
               GC   I+         C     +KA   +N++ ++G   ++ +Y T+I G   SG+
Sbjct: 420 ----GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
              AL + D M + G + +   Y  LI GF K      A  ++  +V +  + PN VTY 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV-DDGLCPNEVTYT 534

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+G CK  + D    + + MK++    +  TY   IHGL K  N  GAE + + M+E 
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 594

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GIF + VTY AMIDG C+ G      E++  M  +GCL N+++Y+ LIR L + GKV+EA
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            +++  L       D  T+  +I     +G +  A   L                   RM
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG------------------RM 696

Query: 390 DKHGCKLNAYTCNSLMNG----FIQASK--------LENAIFLFKEMSRKGCSP------ 431
            K GC+   +T   L+ G    ++ A +        + N  F ++   +   S       
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 432 ------TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
                 +V   N L++ L    R+ EA   +  M+ +G  PD   Y+ L+  L + + +D
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A+ +      +G    +  Y  LI  LC   + ++A   + NM  R   P+ V    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 546 DGLFKTGDCDKALEIWNHILEER 568
           DGL + G  D  +E   HI+E R
Sbjct: 877 DGLLRDGYKDLCMEFL-HIMETR 898


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 259/500 (51%), Gaps = 7/500 (1%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +KG +  V++Y   ++ L K+     A   F +M  RG   +   Y+I++ G  K G+  
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCS 246
           +AKE+  +L  E+ V  NV+TY+V+I+G CK  R D+ LE++  M        D  T+ S
Sbjct: 91  KAKELLGQL-RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            + GLC    +  A  ++  M ++G   + ++Y+ ++DG C+AG++ E   LWE M  K 
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C+ ++V+Y   + GL +  +V EA      +  K   AD+     +I  LCK G+  +A 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF---K 422
             + E      G L +A      M       +A   N+L++   ++ +L + + LF   K
Sbjct: 270 NQMIE-HLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M    C P + +YN +++ LCK ++  EA   V EM   G  PD++TYS L++GLC+  
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+D A  L  +  ++G  PD      +++ L  AGKV+ AL     MK R   P+LVTYN
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+DGL K G  D+A+     ++  +  PD+ SY I +  LC   + + A     + + R
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+LP T+ +H L+  +  NG
Sbjct: 509 GVLPDTVLYHSLLDGLARNG 528



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 167/619 (26%), Positives = 295/619 (47%), Gaps = 70/619 (11%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T + LFD   R+ GY HS   ++  L  L             + ++ ++ Y P+D   S+
Sbjct: 20  TIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ-RRGYPPDDFTYSI 78

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           +                     + G     LC+  + +KAK  L  L E G+K +V +Y 
Sbjct: 79  V---------------------LRG-----LCKAGELDKAKELLGQLRESGVKLNVITYS 112

Query: 140 TVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            VI+G  K+  +  AL +F  M   G    +VV +N L+ G    G+ M    +    + 
Sbjct: 113 VVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS-GERMSEAFVLFEYMA 171

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +    PNV++Y+ +++GLCK GR DE   +W+ M +     D   Y SF+ GLCKA  V 
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVA 231

Query: 259 GAERVYREMVESGIFVDAVTY-----------------NAMIDGFCRAGKIKE-CFELWE 300
            A    R+MV  G   DAV +                 N MI+  CR+G + E C    E
Sbjct: 232 EACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEE 291

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR---EKNCNADSTTHGVLINGLCK 357
           ++ R    +   +N LI  + ++ ++ + + +++ ++   E  C  +  T+ ++++ LCK
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 358 NGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYT 400
              L++A +++NE+   G                  G+L  A  L+  M K G   +++T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             S++N   +A K++ A+   + M  +G +P +V+YNTL++GLCK  R  EA +F+ +M+
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                PD+ +Y+++I  LC+S +   A  +  + +++G  PD  +Y+ L+ GL   G  +
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL+L   +K   C P+ V +  ++DGL K G  + A E+   + +     D  +Y   +
Sbjct: 532 LALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588

Query: 581 KGLCSCSRMSDAFEFLNDA 599
            GL    ++  A + ++DA
Sbjct: 589 SGLRKLGKVDKARQLVDDA 607



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 162/308 (52%), Gaps = 16/308 (5%)

Query: 78  SVIQAYGKNS-MPDKALDVFQRMNEI--FGCEAGI---------LCRKRQFEKAKRFLNS 125
           ++I A  K+  +PD  L +FQRM  +  F C   +         LC+ +Q ++A+  +N 
Sbjct: 306 TLIHAVCKSKRLPDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   GL PDV +Y  +++GL K G L  A  + +EM + GV  +      +++   K G 
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A    E +    S  P++VTYN +++GLCK GR DE +    +M   +   D F+Y 
Sbjct: 425 VDYALSHLETMKARGST-PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT 483

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I  LC++G   GA  +++EMV+ G+  D V Y++++DG  R G      EL +    K
Sbjct: 484 IIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK 543

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              + V + +++ GL + GK ++A  + E + +    AD+ T+  +++GL K G ++KA 
Sbjct: 544 P--DFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKAR 601

Query: 366 QILNEVEE 373
           Q++++  E
Sbjct: 602 QLVDDASE 609



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A  FL  +      PDV+SY  +I  L +SG   GA A+F EM +RGV  +
Sbjct: 454 LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD 513

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y+ L+DG  + G     +++   L+  +   P+ V + ++++GLCK G+ ++  E+ 
Sbjct: 514 TVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVV 569

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           +RM       D+FTY S + GL K G V+ A ++  +  E+   V+ ++
Sbjct: 570 ERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERLS 618


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 280/535 (52%), Gaps = 28/535 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  I        FG   G   +K+Q+       N +    +  +VYS   +
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +   +  +++V  +MF+ G+  + + +N LI+G   +G    A E++  +V +  
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV-KRG 193

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNV++Y  +INGLCK G     ++++ +M++N  + +  TY + I  LCK   V  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
               EMVE GI  +  TYN+++ GFC  G++ E   L+ E++GR    N V++ IL+ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V EA  ++E + EK    D +T+  L++G C    +N+A ++  E+         
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF-EI--------- 363

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M + GC   A++ N L+NG+ ++ +++ A  L  EM  K  +P  V+Y+TL+
Sbjct: 364 --------MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            GLC++ R  EA +  KEM   G  P+++TY +L++G C+   +D ALKL     +K   
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLE 475

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  Y ILI G+  AGK+E A +L+S +      P++ TY  ++ GL K G  D+A ++
Sbjct: 476 PNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDL 535

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + ++   P+  SYN+ ++G       S A   +++ + +       T+ +L+
Sbjct: 536 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 259/495 (52%), Gaps = 20/495 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P V  +G  +    K       +++ ++M    V  NV   NILI+   +      +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +  ++  +  ++P+ +T+N +INGLC  G+  E +E+++ M K   E +  +Y + I+GL
Sbjct: 150 VLGKM-FKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           CK GN   A  V+++M ++G   + VTY+ +ID  C+   + +  E    M  +G   NV
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN ++ G    G+++EA  +++ +  ++   ++ T  +L++GLCK             
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK------------- 315

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                EG +++A  +   M + G + +  T N+LM+G+     +  A  +F+ M RKGC+
Sbjct: 316 -----EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   SYN LING CK  R  EA S + EM  K   PD +TYS L+ GLCQ  +   AL L
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  P++  Y IL+ G C  G +++AL+L  +MK++   PN+V Y  L++G+F 
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  + A E+++ +  +  RPDI +Y + +KGL       +A++        G LP + +
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 550

Query: 611 WHILVRAVMNNGAST 625
           ++++++  + N  S+
Sbjct: 551 YNVMIQGFLQNQDSS 565



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 140/438 (31%), Positives = 219/438 (50%), Gaps = 20/438 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + ++A    N + ++G +P+V SY TVINGL K+G+   A+ VF +M + G + N
Sbjct: 173 LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +ID   K      A E    +V E  + PNV TYN +++G C  G+ +E   ++
Sbjct: 233 VVTYSTIIDSLCKDRLVNDAMEFLSEMV-ERGIPPNVFTYNSIVHGFCNLGQLNEATRLF 291

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M   +   ++ T+   + GLCK G V  A  V+  M E G+  D  TYNA++DG+C  
Sbjct: 292 KEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQ 351

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + E  +++E+M RKGC     SYNILI G  ++ ++DEA S+   +  K  N D+ T+
Sbjct: 352 RLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTY 411

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ GLC+                   GR  +A +L   M  +G   N  T   L++GF
Sbjct: 412 STLMQGLCQ------------------LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A+ L K M  K   P +V Y  LI G+    +   A     ++   G +PD+
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I GL +    D A  L  +    GF P+   YN++I G         A++L   
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573

Query: 529 MKKRNCVPNLVTYNTLMD 546
           M  +    NL T+  L+D
Sbjct: 574 MVGKRFSVNLSTFQMLLD 591



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 128/242 (52%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA +   RM +   + +       +  F +  +    + L  +M     +  V S N LI
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N LC++     + S + +M + G  PD IT++ LINGLC   KI  A++L  + +++G  
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V  Y  +I+GLC  G    A+ ++  M++  C PN+VTY+T++D L K    + A+E 
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + ++E  + P++ +YN  + G C+  ++++A     + + R ++P T+T+ ILV  +  
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315

Query: 621 NG 622
            G
Sbjct: 316 EG 317



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/142 (19%), Positives = 63/142 (44%)

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D AL    + ++    P V  +   +       +    + L + M       N+ + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L++ L +    D ++ +   + +  + PD I++N  + GLC+  ++ +A E  N+ + RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 604 ILPTTITWHILVRAVMNNGAST 625
             P  I++  ++  +   G ++
Sbjct: 194 HEPNVISYTTVINGLCKTGNTS 215


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 172/544 (31%), Positives = 273/544 (50%), Gaps = 55/544 (10%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S+ E  + PDVY+Y  VI    K GD++    V  EM E+  + N+  YN  I G  + G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A E+ ++L+ME  + P+  TY ++++G CK  R  E   +++ M  +    + FTY
Sbjct: 291 AVDEALEV-KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + I G  K GN+E A R+  EM+  G+ ++ VTYNAMI G  +AG++ +   L+  M  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   +  +YN+LI G L++  + +A  +   ++ +       T+ VLI+GLC +  L K
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 364 AIQILNEVEEGG---------------------------------EGRLAD--------- 381
           A ++L+++   G                                  G L D         
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 382 ----------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                     A  L+  M + G K NA+T  + +N + ++ +++ A   FK+M   G  P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V Y  LI G C V    EA S  K MLEKG  PD+  YS +I+ L ++ K   A+ + 
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +FL+ G  PDV +YN LI G C  G +E A QLY  M      PN+V YNTL++GL K 
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+  KA E+++ I E+ L PD+++Y+  + G C    +++AF+  ++ + +GI P    +
Sbjct: 710 GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769

Query: 612 HILV 615
            IL+
Sbjct: 770 CILI 773



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/559 (28%), Positives = 275/559 (49%), Gaps = 55/559 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++++ ++AK    S+   GL P+ ++Y  +I+G +K G++  AL + DEM  RG++ N
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I G  K G+  +A  ++  ++M   + P+  TYN++I+G  K     +  E+ 
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLM-AGLEPDTWTYNLLIDGYLKSHDMAKACELL 439

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MK  +     FTY   I GLC + +++ A  V  +M+ +G+  +   Y  +I  + + 
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            + +   EL ++M   G L ++  YN LI GL    KV+EA  +   + EK    ++ T+
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG--------------------------------- 375
           G  IN   K+G +  A +   ++   G                                 
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 376 -------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                               G+  +A  +  +  K G   + +  NSL++GF +   +E 
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L+ EM   G +P +V YNTLINGLCK+    +A     E+ EK   PD++TYS +I+
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID 739

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+S  +  A KL  + + KG +PD  +Y ILI G    G +E AL L+   ++++ V 
Sbjct: 740 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VG 798

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +L  +N+L+D   K G   +A E+++ +++++L P+I++Y I +        M +A +  
Sbjct: 799 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858

Query: 597 NDALCRGILPTTITWHILV 615
            D   R I+P T+T+  L+
Sbjct: 859 LDMETRNIIPNTLTYTSLL 877



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 264/508 (51%), Gaps = 26/508 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--NEI------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I+AY + S  + A+++ + M  N +      + C    LCR ++ E+AK  L  + EK
Sbjct: 491 TLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK 550

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+KP+ ++YG  IN   KSG++  A   F +M   G+  N V Y ILI G    G+ + A
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              + + ++E  + P++  Y+ +I+ L K G+  E + ++ +  K     D F Y S I 
Sbjct: 611 LSTF-KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G CK G++E A ++Y EM+ +GI  + V YN +I+G C+ G++ +  EL++ +  K  + 
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV+Y+ +I G  ++G + EA  +++ +  K  + D   + +LI+G  K G L KA+ + 
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKL----------------NAYTCNSLMNGFIQAS 412
           +E ++   G L+   SL++   KHG  +                N  T   L++ + +A 
Sbjct: 790 HEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            +E A  LF +M  +   P  ++Y +L+    ++    +  S  K+M  +G   D I Y 
Sbjct: 850 MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++ +  C+  K   ALKL  + L +G   +  +++ LI  LC   ++   L+L S M K 
Sbjct: 910 VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 969

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEI 560
               +  T NTL+ G +K+G+ D+A ++
Sbjct: 970 ELSLSSKTCNTLLLGFYKSGNEDEASKV 997



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 244/540 (45%), Gaps = 55/540 (10%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +     KA   L  +  + L P  ++Y  +I+GL  S DL  A  V D+M   GV+ NV 
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI  + ++  Y  A E+  ++++   V P++  YN +I GLC+  + +E   +   
Sbjct: 488 MYGTLIKAYVQESRYEMAIELL-KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   + ++ TY +FI+   K+G ++ AER +++M+ SGI  + V Y  +I G C  G 
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 292 IKECFELWEVMGRKGCL------------------------------------NVVSYNI 315
             E    ++ M  KG +                                    +V  YN 
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G  + G +++A  +++ +     N +   +  LINGLCK G + KA ++ +E+EE  
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             G L +A  L + M   G   + Y    L++G  +   LE A+
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF E  +K    ++ ++N+LI+  CK  +  EA     +M++K   P+++TY++LI+  
Sbjct: 787 SLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +++ ++ A +L      +   P+   Y  L+      G     + L+ +M+ R    + 
Sbjct: 846 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + Y  +     K G   +AL++ N  L E ++ +   ++  +  LC   ++S   E L++
Sbjct: 906 IAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSE 965



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 225/475 (47%), Gaps = 20/475 (4%)

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           +N+  ++I ID F   G    A  ++   + E   +P ++  N ++  L K        +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISE-GFFPTLICCNNLMRDLLKANMMGLFWK 228

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++  M + +   D +TY + I   CK G+V   + V  EM E     +  TYNA I G C
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLC 287

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G + E  E+ ++M  KG   +  +Y +L+ G  +  +  EA  I+E +     N +  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  LI+G  K G + +A++I +E+   G                  G +A A SL N M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G + + +T N L++G++++  +  A  L  EM  +  +P+  +Y+ LI+GLC     
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A   + +M+  G KP++  Y  LI    Q  + +MA++L    +  G  PD+  YN L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GLC A KVE+A  L  +M ++   PN  TY   ++   K+G+   A   +  +L   +
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            P+ + Y I +KG C      +A       L +G++P    +  ++ ++  NG +
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 180/361 (49%), Gaps = 20/361 (5%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G+ PDV+ Y ++I+G  K GD+  A  ++DEM   G+  N+V YN LI+G  K G+  +A
Sbjct: 656  GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +E+++  + E  + P+VVTY+ +I+G CK G   E  +++D M       D + YC  I 
Sbjct: 716  RELFDE-IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILID 774

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCL 308
            G  K GN+E A  ++ E  +  +      +N++ID FC+ GK+ E  EL++ M  +K   
Sbjct: 775  GCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            N+V+Y ILI    +   ++EA  ++  +  +N   ++ T+  L+    + G   K I + 
Sbjct: 834  NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 893

Query: 369  NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             ++E  G                 EG+  +A  L+N+    G KL     ++L+    + 
Sbjct: 894  KDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKE 953

Query: 412  SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++   + L  EM ++  S +  + NTL+ G  K     EA   +  M   GW P  ++ 
Sbjct: 954  KQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 1013

Query: 472  S 472
            +
Sbjct: 1014 T 1014



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 145/335 (43%), Gaps = 39/335 (11%)

Query: 319 GLLENGKVDEAISIWELLREKNCNADST----THGVLINGLCKNGYLNKAIQILNEVEEG 374
            +L+  ++D+++ +       +    +     ++ +L   LC +G +++A  +L ++ + 
Sbjct: 90  SVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQT 149

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            +  L    SLV    + G   N    +  ++ F     L  A  +F     +G  PT++
Sbjct: 150 RKPPLEILDSLVRCYREFGGS-NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLI 208

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS---------------------- 472
             N L+  L K    G  +     M+E    PD+ TY+                      
Sbjct: 209 CCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM 268

Query: 473 ------------LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                         I GLCQ+  +D AL++    ++KG  PD   Y +L+ G C   + +
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A  ++ +M      PN  TY  L+DG  K G+ ++AL I + ++   L+ ++++YN  +
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            G+     M+ A    N+ L  G+ P T T+++L+
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 167/523 (31%), Positives = 274/523 (52%), Gaps = 24/523 (4%)

Query: 110 LCRKRQFEKA-KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           LCR  +  +A + F   +   G+ P + +Y T+INGL KS +L   + +F+E+ +RG   
Sbjct: 55  LCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHP 114

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV YN LID   K GD   A+ +   +     V PNVVTY+V+INGLCK GR DE  E+
Sbjct: 115 DVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCV-PNVVTYSVLINGLCKVGRIDEAREL 173

Query: 229 WDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYNAMID 284
              M +   +   +  TY SF+ GLCK      A  + R + +  + V  D VT++ +ID
Sbjct: 174 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 233

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           G C+ G+  E      + G     NVV+YN L+ GL +  K++ A ++ E + +K    D
Sbjct: 234 GLCKCGQTDEACNDDMIAGGY-VPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPD 292

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVN---RMDKHG----CKL 396
             T+ VL++  CK   +++A+++L+ +   G    +    S+++   + D+ G      L
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIAL 352

Query: 397 NAY---------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
             Y         T N L+ G  +A   E A  LF+EM  K   P V+++  LI+GLCK  
Sbjct: 353 QVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A   +  M   G  P+++TY++L++GLC+S +I+   +   + +  G  P+   Y 
Sbjct: 413 QVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYG 472

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L++ LC A + +DALQL S +K     P+ VTYN L+DGL+K+G  ++A+ +   ++ +
Sbjct: 473 SLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 532

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
             +PD  ++     GL     ++   E L   L +G+LP   T
Sbjct: 533 GHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 254/485 (52%), Gaps = 24/485 (4%)

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
           F R    +V  YNI++    + G+  RA EI+   +    V P +VTYN +INGLCK   
Sbjct: 37  FVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 96

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
               +E+++ + K     D  TY + I  LCKAG++E A R++  M   G   + VTY+ 
Sbjct: 97  LGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSV 156

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           +I+G C+ G+I E  EL + M RK C    N+++YN  + GL +     EA  +   LR+
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 339 KN--CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRL 379
            +   + D+ T   LI+GLCK G  ++A    +++  GG                   ++
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
             A +++  M   G   +  T + L++ F +AS+++ A+ L   M+ +GC+P VV++N++
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+GLCK +R GEA+    ++  +   PD +T+++LI G C++   + A  L  + + K  
Sbjct: 335 IDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PDV  +  LI GLC AG+VE A  +   M      PN+VTYN L+ GL K+G  ++  E
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCE 454

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
               ++     P+ ++Y   +  LC  SR  DA + ++     G  P T+T++ILV  + 
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLW 514

Query: 620 NNGAS 624
            +G +
Sbjct: 515 KSGKT 519



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 228/458 (49%), Gaps = 23/458 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG--VE 167
           LC+    E+A+R    +  +G  P+V +Y  +INGL K G +  A  +  EM  +   V 
Sbjct: 126 LCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 185

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECL 226
            N++ YN  +DG  K+     A E+   L   +  V P+ VT++ +I+GLCKCG+ DE  
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 245

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
              D M       +  TY + ++GLCKA  +E A  +   MV+ G+  D +TY+ ++D F
Sbjct: 246 N--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+A ++ E  EL   M  +GC  NVV++N +I GL ++ +  EA  I   +  +    D 
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK 363

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T  +LI G CK G   +A  +  E+                      G++  A  +++ 
Sbjct: 364 VTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDL 423

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   N  T N L++G  ++ ++E      +EM   GC P  ++Y +L+  LC+  R
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             +A   V ++   GW PD +TY++L++GL +S K + A+ +  + + KG  PD   +  
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
              GL  +G +   ++L   +  +  +P+  T ++++D
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG     LC+  Q E A+  L+ +   G+ P+V +Y  +++GL KSG +       +EM 
Sbjct: 401 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMV 460

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G     + Y  L+    +      A ++  +L       P+ VTYN++++GL K G+ 
Sbjct: 461 SSGCVPESMTYGSLVYALCRASRTDDALQLVSKL-KSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++ + + + M     + DSFT+ +   GL ++GN+ G   + R ++  G+  DA T +++
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579

Query: 283 ID 284
           +D
Sbjct: 580 LD 581



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 1/130 (0%)

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY-SNMKKRNCVPNLVTYNTLMDGLFKTG 552
           F  +  +  V  YNI++  LC AG+   AL+++   M +    P +VTYNT+++GL K+ 
Sbjct: 36  FFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 95

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           +    +E++  +++    PD+++YN  +  LC    + +A         RG +P  +T+ 
Sbjct: 96  ELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYS 155

Query: 613 ILVRAVMNNG 622
           +L+  +   G
Sbjct: 156 VLINGLCKVG 165


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 262/471 (55%), Gaps = 24/471 (5%)

Query: 154 ALAVFDEM-FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME--TSVYPNVVTYN 210
           A+ +FD M +E   +  V  +N +++   ++G + RA E +  ++     ++ PNV+T+N
Sbjct: 114 AVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFN 173

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++I  +CK G  D+ ++M+  M  ++ + D +TYC+ + GLCKA  ++ A  +  EM   
Sbjct: 174 LVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQID 233

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G F   VT+N +I+G C+ G +    +L + M  KGC  N V+YN LI GL   GK+++A
Sbjct: 234 GCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKA 293

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           IS+ + +    C  +  T+G +INGL K                  +GR  D A ++  M
Sbjct: 294 ISLLDRMVSSKCVPNVVTYGTIINGLVK------------------QGRALDGARVLALM 335

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           ++ G  +N Y  ++L++G  +  K + A+ LFKEM+ K C    + Y+ +I+GLC+  + 
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   + EM     KP+  TYS L+ G  ++     A+++     +  FT +   Y++L
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVL 455

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL--EE 567
           IHGLC  GKV++A+ +++ M  + C P++V Y ++++GL   G  + AL+++N +L  E 
Sbjct: 456 IHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEP 515

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +PD+++YNI L  LC  S +S A + LN  L RG  P  +T  I +R +
Sbjct: 516 DSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 273/541 (50%), Gaps = 34/541 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +P  +  +F S  +   Y      F+ ++    +      + ++L+ +  +K    E 
Sbjct: 37  EHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEK 96

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKRFLNS 125
             + + +AYGK  +P+KA+ +F RM   F C+           ++ ++  F +A  F N 
Sbjct: 97  CFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNH 156

Query: 126 -LWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            +  KG  + P+V ++  VI  + K G +  A+ +F +M     + +V  Y  L+DG  K
Sbjct: 157 VIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCK 216

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  + + + ++   +P+ VT+NV+INGLCK G      ++ D M       +  
Sbjct: 217 ADRIDEAVSLLDEMQID-GCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEV 275

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + IHGLC  G +E A  +   MV S    + VTY  +I+G  + G+  +   +  +M
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM 335

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G  +N   Y+ LI GL + GK  EA+ +++ +  K C  ++  +  +I+GLC++G  
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A+++L+E                  M  + CK NAYT +SLM GF +A     AI ++
Sbjct: 396 DEALEVLSE------------------MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMW 437

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           K+M++   +   V Y+ LI+GLCK  +  EA     +ML KG KPD++ Y  +INGL  +
Sbjct: 438 KDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNA 497

Query: 482 KKIDMALKLCCQFL--QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
             ++ AL+L  + L  +    PDV  YNIL++ LC    +  A+ L ++M  R C P+LV
Sbjct: 498 GLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLV 557

Query: 540 T 540
           T
Sbjct: 558 T 558



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 245/543 (45%), Gaps = 56/543 (10%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
           P  A+ LFD    E     +   F+ +L  +I   L          +   K        L
Sbjct: 111 PEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVL 170

Query: 78  S---VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
           +   VI+   K  + D A+ +F+ M  +  C+  +         LC+  + ++A   L+ 
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDM-PVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   G  P   ++  +INGL K GDL     + D MF +G   N V YN LI G   KG 
Sbjct: 230 MQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A  + +R+V    V PNVVTY  +INGL K GR  +   +   M++     + + Y 
Sbjct: 290 LEKAISLLDRMVSSKCV-PNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I GL K G  + A ++++EM      ++ + Y+A+IDG CR GK  E  E+   M   
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
            C  N  +Y+ L++G  E G   +AI +W+ + + N   +   + VLI+GLCK+G + +A
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           + +  +                  M   GCK +     S++NG   A  +E+A+ L+ EM
Sbjct: 469 MMVWAQ------------------MLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEM 510

Query: 425 --SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL--------- 473
                   P VV+YN L+N LCK      A   +  ML++G  PD++T  +         
Sbjct: 511 LCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKL 570

Query: 474 ------------LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
                       L+  L + +++  A K+    LQK   P  + +  ++  LC+  KV+ 
Sbjct: 571 DPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQA 630

Query: 522 ALQ 524
           A+Q
Sbjct: 631 AIQ 633



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 39/489 (7%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           + + + KSG  +G+  + D  F             LID +   GD+   +++ +R+  E 
Sbjct: 42  ISDKIFKSGPKMGSYKLGDSTFYS-----------LIDNYANLGDFKSLEKVLDRMRCEK 90

Query: 201 SVYPNVVT--YNVMINGLCKCGRFDECLEMWDRMKKN-EREKDSFTYCSFIHGLCKAGNV 257
            V   VV   + V+     K    ++ + ++DRM    E ++   ++ S ++ + + G  
Sbjct: 91  RV---VVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLF 147

Query: 258 EGAERVYREMVES---GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             A   Y  ++ +    I  + +T+N +I   C+ G + +  +++  M    C  +V +Y
Sbjct: 148 YRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTY 207

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L+ GL +  ++DEA+S+ + ++   C     T  VLINGLCK                
Sbjct: 208 CTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK---------------- 251

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G LA  A LV+ M   GC  N  T N+L++G     KLE AI L   M    C P V
Sbjct: 252 --KGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 309

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y T+INGL K  R  +    +  M E+G+  +   YS LI+GL +  K   A++L  +
Sbjct: 310 VTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKE 369

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              K    +  +Y+ +I GLC  GK ++AL++ S M    C PN  TY++LM G F+ G+
Sbjct: 370 MTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGN 429

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             KA+E+W  + +     + + Y++ + GLC   ++ +A       L +G  P  + +  
Sbjct: 430 GHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGS 489

Query: 614 LVRAVMNNG 622
           ++  + N G
Sbjct: 490 MINGLSNAG 498



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 5/255 (1%)

Query: 375 GEGRLAD-AASLVNRMD-KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGC-- 429
           G+  L + A  L +RM  +  CK    + NS++N  IQ      A+  +   +  KG   
Sbjct: 106 GKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNI 165

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP V+++N +I  +CKV    +A    ++M     +PD+ TY  L++GLC++ +ID A+ 
Sbjct: 166 SPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVS 225

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +    G  P    +N+LI+GLC  G +    +L  NM  + C PN VTYNTL+ GL 
Sbjct: 226 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
             G  +KA+ + + ++  +  P++++Y   + GL    R  D    L     RG      
Sbjct: 286 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 345

Query: 610 TWHILVRAVMNNGAS 624
            +  L+  +   G S
Sbjct: 346 VYSALISGLFKEGKS 360


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 173/624 (27%), Positives = 308/624 (49%), Gaps = 33/624 (5%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T++A+F  A  + GY H+  ++H ++ +L   K    + ++L  I+ +     E + + +
Sbjct: 84  TSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICI 143

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKRFLNSLWEKG 130
           ++ YG+ ++P +A  +   M  ++ CE           IL        A      +  KG
Sbjct: 144 MKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKG 203

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P VY++G V+  L    ++  A ++  +M + G   N V Y  LI    K+     A 
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEAL 263

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           ++ E + +     P+V T+N +I GLC+  R  E  ++ DRM       +  TY   ++G
Sbjct: 264 KLLEEMFL-MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGC-L 308
           LC+ G V+ A+ +  ++       + V +  +I+G+ ++G++ E    L++ M + GC  
Sbjct: 323 LCRVGKVDEAQVLLNKVPTP----NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V ++N LI GL + G +  A+ +   +    C  +  T+  L++G CK   L +A  +L
Sbjct: 379 DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           NE+   G                  G++  A  ++  M   GCK + +T N+L+ G  + 
Sbjct: 439 NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKV 498

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            + E+A+ L+++M   G     V+YNTLI+   +     EA   V +ML +G   D ITY
Sbjct: 499 DRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY 558

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI   C+    + AL L  + ++K   P     N+LI+GLC  GKV +AL+L  +M  
Sbjct: 559 NGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIH 618

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R   P++VTYN+L++GL K G+  +A  ++N +  E ++PD I+YN  +   C      D
Sbjct: 619 RGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDD 678

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
           A+  L   +    +P  +TW+ILV
Sbjct: 679 AYLLLLRGVENAFIPNDVTWYILV 702



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 231/460 (50%), Gaps = 24/460 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ +  +A + L  ++  G  PDV ++  VI GL +   +     + D M  RG   N
Sbjct: 253 LSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPN 312

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC-LEM 228
            + Y +L++G  + G    A+ +  ++       PN V + ++ING  K GR DE    +
Sbjct: 313 DITYGVLMNGLCRVGKVDEAQVLLNKVPT-----PNDVHFTILINGYVKSGRLDEANAFL 367

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D+M KN    D FT+ + IHGLCK G +  A  +  +M  +G   + +TY  ++DGFC+
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             +++E   +   M  KG  LN++ YN+L+R L +NGKV +A+ +   + +K C  D  T
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
              LI GLCK      A+ +  ++   G                  G + +A  LVN M 
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             GC L+  T N L+  F +    E A+ LF EM RK   P+ +S N LINGLC+V +  
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A   +++M+ +G  PD++TY+ LINGLC+   I  A  L  +   +G  PD   YN LI
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
              C AG  +DA  L     +   +PN VT+  L+    K
Sbjct: 668 CWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 210/423 (49%), Gaps = 24/423 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P   +YNV+++ L           ++  M         +T+   +  LC    V+ A  +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            R+M + G   ++V Y  +I    +  ++ E  +L E M   GCL +V ++N +I GL  
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
             ++ E   + + +  +    +  T+GVL+NGLC+ G +++A  +LN+V    +      
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFT-- 348

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA-IFLFKEMSRKGCSPTVVSYNTLIN 441
                                L+NG++++ +L+ A  FL+ +M + GC P V ++NTLI+
Sbjct: 349 --------------------ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIH 388

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLCK    G A   V +M   G  P++ITY+ L++G C+  +++ A  +  +   KGF  
Sbjct: 389 GLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFEL 448

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  YN+L+  LC  GKV  AL +   M  + C P++ T+NTL+ GL K    + AL ++
Sbjct: 449 NIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALY 508

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L + +  + ++YN  +        + +A + +ND L RG     IT++ L++A    
Sbjct: 509 RDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKL 568

Query: 622 GAS 624
           GA+
Sbjct: 569 GAT 571



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 71  CPEDVAL--SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAK 120
           CP D      +I+A+ K    +KAL +F  M           C   I  LCR  +   A 
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
             L  +  +GL PDV +Y ++INGL K G++  A  +F+++   G++ + + YN LI   
Sbjct: 611 ELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWH 670

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
            + G +  A  +  R V E +  PN VT+ ++++   K
Sbjct: 671 CRAGMFDDAYLLLLRGV-ENAFIPNDVTWYILVSNFIK 707


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 175/605 (28%), Positives = 305/605 (50%), Gaps = 80/605 (13%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E +P  +  +F S  +   Y      F+ ++    +      + ++L+ ++ +K    E 
Sbjct: 67  EPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEK 126

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
             + + +AYGK  +P+KA+D+F RM   F C       KR  +                 
Sbjct: 127 CFIVIFKAYGKAHLPEKAVDLFDRMACEFEC-------KRTGK----------------- 162

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             S+ +V+N +++ G           +F R +E     YN +I     KG          
Sbjct: 163 --SFNSVLNVIIQEG-----------LFHRALEF----YNHVIGA---KG---------- 192

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                 S+ PNV+T+N++I  +CK G  D+ ++++  M   + E D +TYC+ + GLCKA
Sbjct: 193 -----VSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKA 247

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             ++ A  +  EM   G F   VT+N +I+G C+ G +    +L + M  KGC+ N V+Y
Sbjct: 248 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTY 307

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI GL   GK+++AIS+ + +    C  +  T+G +INGL K                
Sbjct: 308 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK---------------- 351

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +GR  D A ++  M++ G  +N Y  ++L++G  +  K + A+ LFKEM+ KG     
Sbjct: 352 --QGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNT 409

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y+ +I+GLC+  +  +A   + EM  KG  P+  T S L+ G  ++     A+++   
Sbjct: 410 IVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKD 469

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             +  FT +   Y++LIHGLC  GKV++A+ +++ M  + C P++V Y+++++GL   G 
Sbjct: 470 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGL 529

Query: 554 CDKALEIWNHILEE--RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            + A++++N +L +    +PD+++YNI L  LC  S +S A + LN  L RG  P  +T 
Sbjct: 530 VEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTC 589

Query: 612 HILVR 616
            I +R
Sbjct: 590 TIFLR 594



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 230/479 (48%), Gaps = 53/479 (11%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           VI+A  K  + D A+ VF+ M  I  CE  +         LC+  + ++A   L+ +   
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMT-IRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQID 263

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P   ++  +INGL K GDL  A  + D MF +G   N V YN LI G   KG   +A
Sbjct: 264 GCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKA 323

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +R+V    V PNVVTY  +INGL K GR  +   +   M++     + + Y + I 
Sbjct: 324 ISLLDRMVSSKCV-PNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLIS 382

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GL K G  + A  +++EM   G  ++ + Y+A+IDG CR GK  +  E+   M  KGC  
Sbjct: 383 GLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTP 442

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  + + L++G  E G    A+ +W+ + + N   +   + VLI+GLCK+G + +A+ + 
Sbjct: 443 NAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 502

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M   GCK +    +S++NG   A  +E+A+ L+ EM  +G
Sbjct: 503 TQ------------------MLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG 544

Query: 429 --CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL------------- 473
               P VV+YN L+N LCK      A   +  ML++G  PD++T ++             
Sbjct: 545 PDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQ 604

Query: 474 --------LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
                   L+  L + +++  A K+    LQK   P  + +  ++  LC   KV+  +Q
Sbjct: 605 DGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQ 663



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 190/392 (48%), Gaps = 42/392 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + EKA   L+ +      P+V +YGT+INGLVK G  L    V   M ERG   N
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+ LI G FK+G    A  +++ + ++     N + Y+ +I+GLC+ G+ D+ +E+ 
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVK-GYELNTIVYSAVIDGLCRDGKPDDAVEVL 432

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       +++T  S + G  +AGN   A  V+++M +     + V Y+ +I G C+ 
Sbjct: 433 SEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKD 492

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADST 346
           GK+KE   +W  M  KGC  +VV+Y+ +I GL   G V++A+ ++   L +  +   D  
Sbjct: 493 GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVV 552

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +L+N LCK   +++AI +LN              S+++R    GC  +  TC     
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLN--------------SMLDR----GCDPDLVTCT---- 590

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVS---YNTLINGLCKVERFGEAYSFVKEMLEKG 463
                        +F  M R+   P        + L+  L K +R   A   V+ ML+K 
Sbjct: 591 -------------IFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKL 637

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             P   T++ ++  LC+ KK+   ++ C   L
Sbjct: 638 LPPKHSTWARVVENLCKPKKVQAVIQKCWSIL 669



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 180/391 (46%), Gaps = 31/391 (7%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+ S I+     G+ +  E+V   M      +    +  +   + +A   ++  +L++ M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 303 G------RKGCLNVVSYNILIRGLLENGKVDEAISIWELL---REKNCNADSTTHGVLIN 353
                  R G     S+N ++  +++ G    A+  +  +   +  + + +  T  ++I 
Sbjct: 152 ACEFECKRTG----KSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIK 207

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            +CK G ++ AIQ+  +                  M    C+ + YT  +LM+G  +A +
Sbjct: 208 AMCKVGLVDDAIQVFRD------------------MTIRKCEPDVYTYCTLMDGLCKADR 249

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ A+ L  EM   GC P+ V++N LINGLCK      A   V  M  KG  P+ +TY+ 
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+GLC   K++ A+ L  + +     P+V  Y  +I+GL   G+  D   + + M++R 
Sbjct: 310 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N   Y+TL+ GLFK G   +A+ ++  +  +    + I Y+  + GLC   +  DA 
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           E L++   +G  P   T   L++     G S
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 259/500 (51%), Gaps = 7/500 (1%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +KG +  V++Y   ++ L K+     A   F +M  RG   +   Y+I++ G  K G+  
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCS 246
           +AKE+  +L  E+ V  NV+TY+V+I+G CK  R D+ LE++  M        D  T+ S
Sbjct: 91  KAKELLGQL-RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            + GLC    +  A  ++  M ++G   + ++Y+ ++DG C+AG++ E   LWE M  K 
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C+ ++V+Y   + GL +  +V EA      +  K   AD+     +I  LCK G+  +A 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF---K 422
             + E      G L +A      M       +A   N+L++   ++ +L + + LF   K
Sbjct: 270 NQMIE-HLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M    C P + +YN +++ LCK ++  EA   V EM   G  PD++TYS L++GLC+  
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+D A  L  +  ++G  PD      +++ L  AGKV+ AL     MK R   P+LVTYN
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+DGL K G  D+A+     ++  +  PD+ SY I +  LC   + + A     + + R
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+LP T+ +H L+  +  NG
Sbjct: 509 GVLPDTVLYHSLLDGLARNG 528



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/619 (26%), Positives = 296/619 (47%), Gaps = 70/619 (11%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T + LFD   R+ GY HS   ++  L  L             + ++ ++ Y P+D   S+
Sbjct: 20  TIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ-RRGYPPDDFTYSI 78

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           +                     + G     LC+  + +KAK  L  L E G+K +V +Y 
Sbjct: 79  V---------------------LRG-----LCKAGELDKAKELLGQLRESGVKLNVITYS 112

Query: 140 TVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            VI+G  K+  +  AL +F  M   G    +VV +N L+ G    G+ M    +    + 
Sbjct: 113 VVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS-GERMSEAFVLFEYMA 171

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +    PNV++Y+ +++GLCK GR DE   +W+ M +     D   Y SF+ GLCKA  V 
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVA 231

Query: 259 GAERVYREMVESGIFVDAVTY-----------------NAMIDGFCRAGKIKE-CFELWE 300
            A    R+MV  G   DAV +                 N MI+  CR+G + E C    E
Sbjct: 232 EACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEE 291

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR---EKNCNADSTTHGVLINGLCK 357
           ++ R    +   +N LI  + ++ ++ + + +++ ++   E  C  +  T+ ++++ LCK
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 358 NGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYT 400
              L++A +++NE+   G                  G+L  A  L+  M K G   +++T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             S++N   +A K++ A+   + M  +G +P +V+YNTL++GLCK  R  EA +F+ +M+
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                PD+ +Y+++I  LC+S +   A  +  + +++G  PD  +Y+ L+ GL   G  +
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL+L   +K   C P+ V +  ++DGL K G  + A E+   + +     D  +Y   +
Sbjct: 532 LALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588

Query: 581 KGLCSCSRMSDAFEFLNDA 599
           +GL    ++  A + ++DA
Sbjct: 589 RGLRKLGKVDKARQLVDDA 607



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 78  SVIQAYGKNS-MPDKALDVFQRMNEI--FGCEAGI---------LCRKRQFEKAKRFLNS 125
           ++I A  K+  +PD  L +FQRM  +  F C   +         LC+ +Q ++A+  +N 
Sbjct: 306 TLIHAVCKSKRLPDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   GL PDV +Y  +++GL K G L  A  + +EM + GV  +      +++   K G 
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A    E +    S  P++VTYN +++GLCK GR DE +    +M   +   D F+Y 
Sbjct: 425 VDYALSHLETMKARGST-PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT 483

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I  LC++G   GA  +++EMV+ G+  D V Y++++DG  R G      EL +    K
Sbjct: 484 IIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK 543

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              + V + +++ GL + GK ++A  + E + +    AD+ T+  ++ GL K G ++KA 
Sbjct: 544 P--DFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKAR 601

Query: 366 QILNEVEE 373
           Q++++  E
Sbjct: 602 QLVDDASE 609



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A  FL  +      PDV+SY  +I  L +SG   GA A+F EM +RGV  +
Sbjct: 454 LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD 513

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y+ L+DG  + G     +++   L+  +   P+ V + ++++GLCK G+ ++  E+ 
Sbjct: 514 TVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVV 569

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           +RM       D+FTY + + GL K G V+ A ++  +  E+   V+ ++
Sbjct: 570 ERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLS 618


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 175/647 (27%), Positives = 320/647 (49%), Gaps = 33/647 (5%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           ++I+  +L  LL+   +  T L +F+    + GY H+  +++  + +L        + ++
Sbjct: 75  ILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKL 134

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILC 111
           L  ++ +     E + + +++ YGK   P +A+ +   M  ++ CE           IL 
Sbjct: 135 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
                + A      +  KG+ P V+++G V+  L    ++  A ++  +M + G   N +
Sbjct: 195 TGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI    +K     A ++ E + +     P+V T+N +I+GLCK  +  +  ++ DR
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFV-MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDR 313

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       D+ TY   +HGLC+ G +  A ++  ++       +    N +I+G+  +G+
Sbjct: 314 MLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP----NNAILNTLINGYVMSGQ 369

Query: 292 IKECFE-LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +KE    L E M   G   ++ +YNIL+ GL + G +  A  +   +  + C  +  T+ 
Sbjct: 370 LKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA 429

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+NGLCK G L +A  +L+E+   G                 + ++  A +L++ M   
Sbjct: 430 ILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK 489

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK + +T NSL+ G  +  +++ A  LF  M   G     V+YNTLI+ L +   F +A
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKA 549

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + V +ML +G   D ITY+ LI   C+   I+  L+L  Q +  G   D    NI+I+G
Sbjct: 550 LTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING 609

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  GKV++A +   +   R  VP++VTYN++++GL K G   +AL +++ +  E +RPD
Sbjct: 610 LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPD 669

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
             +YN  +   C    ++DA  F    +  G +P+ +TW++LV  ++
Sbjct: 670 AFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLL 716



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 218/472 (46%), Gaps = 31/472 (6%)

Query: 160 EMFERGVETNVVC-----YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           E+FER       C     Y + I+     G +    ++  ++  E  V+   + + +++ 
Sbjct: 97  EIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESI-FMIIMK 155

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EGAERVYREMVESGIF 273
              K G+  + + +   M+     + +F     +  +   GN  + A  V+ +M+  G+ 
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
               T+  ++   C   ++     L   M + GC+ N + Y  LI  L +  +V EA+ +
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            E +    C  D  T   +I+GLCK   +NK               + DA  LV+RM   
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLCK---VNK---------------IHDATKLVDRMLLR 317

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   +  T   L++G  +  KL  A    +++  K   P     NTLING     +  EA
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEA 373

Query: 453 YSFVKE-MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            SF+ E M+  G++PD+ TY++L++GLC+   +  A  L  +  ++G  P+V  Y IL++
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVN 433

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC AG +E+A  +   M  R    N V YN L+  L +      AL + + +  +  +P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           D+ +YN  + GLC   R+ +AF   ++ L  G +   +T++ L+ A++  GA
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 2/271 (0%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           I+ C    LCRK +   A   L+ +  KG KPD+++Y ++I GL K   +  A  +F  M
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
              G   N V YN LI    ++G + +A  +   ++       + +TYN +I   CK G 
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTL-DKITYNGLIKAFCKVGN 580

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            ++ LE++++M  +    D+ +    I+GLCK G V+ A    R+ +  G   D VTYN+
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +++G C+ G+IKE   L++ +  +G   +  +YN  I    + G V++A S +    E  
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENG 700

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
               + T  VL+  L K         +L+E+
Sbjct: 701 FVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/501 (31%), Positives = 263/501 (52%), Gaps = 23/501 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + +K  +PD +++  ++ GL +S  L  A  +   M E G   +   YN LI G+ K  D
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           + +A +    +V +    P VVTY  +++GLCK GR  + +++ D M+      + +TY 
Sbjct: 61  FGQAFKFLAEMV-KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GLC+   ++ A+++  EM   G F D VTYN+ I G C+  ++ E  +    M   
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +VVSY  +I GL ++G +D A  + + +  + C  D  T+  LI+G CK G + +A+
Sbjct: 180 P--DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                              L++ M K GC+ N    NSL+    +   +  A  +  EM 
Sbjct: 238 ------------------GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           R+G +P VVSYN  I+GLCK ER  +A +    M+E+G  P+  +YS+L+  LC+ K++D
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN-MKKRNCVPNLVTYNTL 544
            A+ L  Q  +K    D+ +Y +L+ GLC  G+ ++A  L+S  + ++ C P++  YN +
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D   K    DKAL+I   +LE R   +++++NI + GLC   R+SDA   L   +  G 
Sbjct: 400 LDSHCKRRQIDKALQIHKQMLE-RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 458

Query: 605 LPTTITWHILVRAVMNNGAST 625
           +P  +T+  LV A+   G S 
Sbjct: 459 IPDFVTYGTLVDAMCKCGKSA 479



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 257/474 (54%), Gaps = 25/474 (5%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + + F +A +FL  + +    P V +Y  +++GL K+G    A+ + DEM ++G   N+ 
Sbjct: 57  KAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIY 116

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN++++G  ++     AK++ E + +    +P+VVTYN  I GLCKC R DE  +   R
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVR-GYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 175

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       D  +Y + I+GLCK+G+++ A R+  +M   G   D VTY+++IDGFC+ G+
Sbjct: 176 MPVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++    L + M + GC  N+V+YN L+  L   G + +A  +   +  +    D  ++  
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            I+GLCK                    R+  A ++ +RM + GC  NA + + L+    +
Sbjct: 293 CIDGLCK------------------AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS-FVKEMLEKGWKPDMI 469
             +L++AI L ++   K     ++ Y  L++GLCK  RF EA + F K + EK  +PD+ 
Sbjct: 335 KKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+++++  C+ ++ID AL++  Q L++    +V  +NIL+HGLC   ++ DA  +   M
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM 453

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
                +P+ VTY TL+D + K G    ALE++   ++    PD+++Y+  + GL
Sbjct: 454 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 238/469 (50%), Gaps = 51/469 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A++FL  +    + PDV SY TVINGL KSGDL  A  + D+M  RG   +
Sbjct: 160 LCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPD 216

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LIDGF K G+  RA  + + + ++    PN+V YN ++  L + G   +  +M 
Sbjct: 217 VVTYSSLIDGFCKGGEVERAMGLLDSM-LKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 275

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     D  +Y + I GLCKA  V+ A+ V+  MVE G   +A +Y+ +++  C+ 
Sbjct: 276 VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK 335

Query: 290 GKIKECFELWEVMGRK-GCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTT 347
            ++ +   L E    K   ++++ Y +L+ GL + G+ DEA +++ ++L EK C  D   
Sbjct: 336 KELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAASLVNRMDK 391
           + V+++  CK   ++KA+QI  ++ E                  + RL+DA +++  M  
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T  +L++   +  K   A+ LF+E  + GC P VV+Y+ LI GL       E
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515

Query: 452 AYS-FVK---------------------------EMLEKGWKPDMITYSLLING-LCQSK 482
           AY  F K                           E++E   +P+  T+   I+G L +++
Sbjct: 516 AYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAE 575

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +  A  L  + ++ GF PD+ + N LI      G +E+A +++ +MK+
Sbjct: 576 SLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 175/647 (27%), Positives = 320/647 (49%), Gaps = 33/647 (5%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           ++I+  +L  LL+   +  T L +F+    + GY H+  +++  + +L        + ++
Sbjct: 75  ILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKL 134

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILC 111
           L  ++ +     E + + +++ YGK   P +A+ +   M  ++ CE           IL 
Sbjct: 135 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
                + A      +  KG+ P V+++G V+  L    ++  A ++  +M + G   N +
Sbjct: 195 TGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI    +K     A ++ E + +     P+V T+N +I+GLCK  +  +  ++ DR
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFV-MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDR 313

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       D+ TY   +HGLC+ G +  A ++  ++       +    N +I+G+  +G+
Sbjct: 314 MLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP----NNAILNTLINGYVMSGQ 369

Query: 292 IKECFE-LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +KE    L E M   G   ++ +YNIL+ GL + G +  A  +   +  + C  +  T+ 
Sbjct: 370 LKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA 429

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L+NGLCK G L +A  +L+E+   G                 + ++  A +L++ M   
Sbjct: 430 ILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK 489

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK + +T NSL+ G  +  +++ A  LF  M   G     V+YNTLI+ L +   F +A
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKA 549

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + V +ML +G   D ITY+ LI   C+   I+  L+L  Q +  G   D    NI+I+G
Sbjct: 550 LTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING 609

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  GKV++A +   +   R  VP++VTYN++++GL K G   +AL +++ +  E +RPD
Sbjct: 610 LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPD 669

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
             +YN  +   C    ++DA  F    +  G +P+ +TW++LV  ++
Sbjct: 670 AFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLL 716



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 218/472 (46%), Gaps = 31/472 (6%)

Query: 160 EMFERGVETNVVC-----YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           E+FER       C     Y + I+     G +    ++  ++  E  V+   + + +++ 
Sbjct: 97  EIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESI-FMIIMK 155

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EGAERVYREMVESGIF 273
              K G+  + + +   M+     + +F     +  +   GN  + A  V+ +M+  G+ 
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
               T+  ++   C   ++     L   M + GC+ N + Y  LI  L +  +V EA+ +
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            E +    C  D  T   +I+GLCK   +NK               + DA  LV+RM   
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLCK---VNK---------------IHDATKLVDRMLLR 317

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   +  T   L++G  +  KL  A    +++  K   P     NTLING     +  EA
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEA 373

Query: 453 YSFVKE-MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            SF+ E M+  G++PD+ TY++L++GLC+   +  A  L  +  ++G  P+V  Y IL++
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVN 433

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC AG +E+A  +   M  R    N V YN L+  L +      AL + + +  +  +P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           D+ +YN  + GLC   R+ +AF   ++ L  G +   +T++ L+ A++  GA
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 324/664 (48%), Gaps = 54/664 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVV------- 55
           +    ++NLL    N  + L  F   +R   + H    F  +L RL+  +L V       
Sbjct: 76  LKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRI 135

Query: 56  ----------HVSRILELI-EIQKCY----CPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
                      V R+++++ EI   Y         +  +IQ  GK  M     DV+  M 
Sbjct: 136 LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQ-LGKFDMDGLGRDVYIEML 194

Query: 101 E--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     F     ILC K + ++A+  +  ++  G  PD ++Y ++I G  K+G+L 
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +FD M + G + N V Y+ LI+G   +G    A ++ E ++ +  + P V  Y + 
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI-DKGIEPTVHAYTIP 313

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I  LC  GR  E +++  +MKK     +  TY + I GL + G  E A  VY +M+  G+
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
              AVTY+A+I+     G+ +    ++E M     L N  +YN++I+G    G + +A +
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           I++ + +   + +  T+ ++I+   K GY+N A+++L  ++  G                
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFS 493

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             G+L  A SL N M +HG   N  T N+++NG++  +K+++A+ LF +M   G  P+  
Sbjct: 494 RGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG 553

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN +I+G  K  R  EA +F  +M+++G  P++ITY+  I+GLC++ +  +A K+  + 
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            ++ + P++  Y+ LI GLC  G+ EDA +L  +     C PN+ TY TL+ GL   G C
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRC 669

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A ++   + ++ L+P    Y   L G C    +  A +  +  +  G  P    +  L
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKAL 729

Query: 615 VRAV 618
           + A+
Sbjct: 730 ICAL 733



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 244/483 (50%), Gaps = 32/483 (6%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C+AG  C      +A + L  + ++G  P+V +Y  +I+GL + G    A+ V+ +M   
Sbjct: 318 CDAGRSC------EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+    V Y+ LI+  + +G +  A  I+E ++   S+ PN  TYNV+I G C  G   +
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQK 430

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              ++D+M K     +  TY   IH   K G +  A R+   M  +G+ +D  TY  +I 
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI-WELLREKNCN 342
           GF R GK++  F L+  M   G   NVV+YN +I G L   KVD+A+++ W+++   N  
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
           + S T+ ++I+G  K   +++A     ++ + G                  GR + A  +
Sbjct: 551 S-SGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKI 609

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            + M K     N  T +SL++G  Q  + E+A  L  +    GC P V +Y TL+ GLC 
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCG 665

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA   V+ M +KG +P    Y  L+ G C++ +++ ALK+    +  GF P ++ 
Sbjct: 666 KGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  LI  LC A   + A  ++  M K++   + V +  L+DGL K G+ D +LE+  H++
Sbjct: 726 YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL-HVM 784

Query: 566 EER 568
           E R
Sbjct: 785 ESR 787



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           +G++ +A  ++  +  +G   + +T  SL+ G  +   L+ A  +F  M + GC P  V+
Sbjct: 215 KGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVT 274

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y+ LINGLC   R  EA   ++EM++KG +P +  Y++ I  LC + +   A+KL  +  
Sbjct: 275 YSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           ++G  P+V  Y  LI GL   GK E A+ +Y  M     VP  VTY+ L++ L+  G  +
Sbjct: 335 KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            AL I+  +L     P+  +YN+ +KG CS   +  A    +  L  G  P  IT++I++
Sbjct: 395 TALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 616 RAVMNNG 622
                 G
Sbjct: 455 HIYFKQG 461



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 43/400 (10%)

Query: 4   SAKRLLNLLKA---EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           +A RLL ++K    + +  T   L    +R     H+  LF+ ++   I P +V + +  
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA-- 522

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
                             +I  Y   +  D AL +F +M E         +        +
Sbjct: 523 ------------------IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             +  +A+ F   + ++GL P+V +Y + I+GL K+G    A  +F EM +R    N+  
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y+ LIDG  ++G      E  ERL ++    PNV TY  ++ GLC  GR  E  ++ + M
Sbjct: 625 YSSLIDGLCQEGQ----AEDAERL-LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           KK   +     Y + + G CK   VE A +++  MV +G       Y A+I   C+A   
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR 739

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++   +++ M +K    + V + +L+ GLL+ G+ D ++ +  ++  +NC  +  T  +L
Sbjct: 740 QKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVML 799

Query: 352 INGLCKNG------YLNKAIQILNEVEEGGEGRLADAASL 385
              L   G       ++K + I+ E ++     L D  +L
Sbjct: 800 ARELSALGCSIEIPQISKQLGIVKEKQKQTADVLRDDIAL 839



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 37/285 (12%)

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
           EG   R+    S +N     G  L +++   +  G      L   +++  EM   G  P 
Sbjct: 144 EGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYI--EMLNSGIRPN 201

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           + ++N +I  LC   +  EA   +  +   G  PD  TY+ LI G C++  +D+A ++  
Sbjct: 202 LFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFD 261

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDAL----------------------------- 523
           + ++ G  P+   Y+ LI+GLCS G++E+A+                             
Sbjct: 262 RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAG 321

Query: 524 ------QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
                 +L   MKKR C PN+ TY  L+ GL + G  + A+ +++ +L + L P  ++Y+
Sbjct: 322 RSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYS 381

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +  L    R   A       L    LP T T++++++   + G
Sbjct: 382 ALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIG 426



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM---ALKLCCQFLQKGFTP 501
           +V+R  +  S +    + G+   + ++S L   L Q  K DM      +  + L  G  P
Sbjct: 146 EVKRVIQVLSEINTTYDFGYT--LYSFSTL---LIQLGKFDMDGLGRDVYIEMLNSGIRP 200

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  +N +I  LC+ GKV++A  +  ++      P+  TY +L+ G  K G+ D A E++
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + ++++   P+ ++Y+  + GLCS  R+ +A + L + + +GI PT   + I + ++ + 
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320

Query: 622 GAS 624
           G S
Sbjct: 321 GRS 323


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 186/658 (28%), Positives = 314/658 (47%), Gaps = 56/658 (8%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC- 69
           ++    N  TAL  F   ++   Y H    F  +L RL+  K++     +  ++ I+ C 
Sbjct: 77  IINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHV-RILMIKACR 135

Query: 70  --------------YCPEDVAL---------SVIQAYGKNSMPDKALDVFQRMNE----- 101
                             D  L         +++   GK  M   A +V+ ++       
Sbjct: 136 NEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKP 195

Query: 102 ---IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
               F     ILC+K + ++A    N +++  L PD ++Y ++I G  ++  L  A  VF
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           D M + G   N V Y+ LI+G   +G    A ++ E +  E  + P V TY V I+ LC 
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT-EKGIEPTVYTYTVPISSLCD 314

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            GR D+ + +   M K        TY + I GL +AG +E A  +Y +M++ G+  + VT
Sbjct: 315 IGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVT 374

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           YNA+I+  C  G+     ++++ M   G L N  +YN +I+GL     +++A+ ++  + 
Sbjct: 375 YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
           +   +    T+  LI    K GYLN A + L  ++E                    G+L 
Sbjct: 435 KDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLD 494

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
            A S    M K G   N +T  ++++G+ +  K++ A+ LF+ M   GCS ++ +YN +I
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GL K  RF EA  F  +M E+G +P+ ITY+ LINGLC++   ++A K+  +  +K   
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   Y  LI+GLC  GKV+ A +L  N     C P + TY+TL+ GL + G  ++A ++
Sbjct: 615 PNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQL 670

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             ++ E+ L P +  Y   L   C   ++  A E  N    +G  P    + +L+ A+
Sbjct: 671 VENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICAL 728



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 268/546 (49%), Gaps = 38/546 (6%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           +   +  + I+P +  +   I  L +I +     D A++++++ GK             +
Sbjct: 289 MLEEMTEKGIEPTVYTYTVPISSLCDIGRV----DDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           + +F        R  + E A    + + ++GL P+  +Y  +IN L   G    AL +FD
Sbjct: 345 SGLF--------RAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M   G   N   YN +I G F   D  +A  ++ ++ ++    P VVTYN +I    K 
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM-LKDGPSPTVVTYNTLIVENLKR 455

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G  +        MK++  E D  TYC  I G CK G ++ A   + EM++ GI  +  TY
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
            AMIDG+C+ GKI     L+E M   GC  ++ +YN +I GL +  +  EA      + E
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +    ++ T+  LINGLCKN   N A +I +E                  M+K  C  NA
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHE------------------MEKKNCLPNA 617

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +T  SL+ G  Q  K++ A    + ++  GC PT+ +Y+TL++GLC+  R  EA   V+ 
Sbjct: 618 HTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M EKG  P M  Y  L+   C+S K+D AL++      KGF P + +Y +LI  LC   +
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYN 577
            E+AL ++ ++ K+    +L+ +  L+DGL + GD D  ++   +++E R   P + +Y 
Sbjct: 734 AEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFL-YLMESRNCTPSLHTYI 792

Query: 578 ITLKGL 583
           I  + L
Sbjct: 793 ILAREL 798



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 245/489 (50%), Gaps = 20/489 (4%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           +YS+ T++  L K   +  A  V+ ++F  GV+ +++ +N +I+   KKG    A  ++ 
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           + + +  + P+  TY  +I G C+  + D+  E++DRM K+    +S TY + I+GLC  
Sbjct: 222 K-IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G +  A  +  EM E GI     TY   I   C  G++ +   L   MG+KGC  +V +Y
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             +I GL   GK++ AI ++  + ++    ++ T+  LIN LC                 
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCT---------------- 384

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EGR   A  + + M+ HG   NA T N ++ G      +E A+ +F +M + G SPTV
Sbjct: 385 --EGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YNTLI    K      A  F+  M E   +PD  TY  LI+G C+  K+D A     +
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+ G +P+   Y  +I G C  GK++ AL L+  M++  C  ++ TYN ++ GL K   
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A +    + E+ L+P+ I+Y   + GLC  +  + AF+  ++   +  LP   T+  
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTS 622

Query: 614 LVRAVMNNG 622
           L+  +   G
Sbjct: 623 LIYGLCQEG 631



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 204/436 (46%), Gaps = 53/436 (12%)

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
           +++ + +  L K   V  A+ VY ++  SG+    +T+N MI+  C+ GK++E   ++ +
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +     C +  +Y  LI G   N K+D+A  +++ + +  CN +S T+  LINGLC  G 
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282

Query: 361 LNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNS 403
           + +A+ +L E+ E G                  GR+ DA +LV  M K GC  +  T  +
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G  +A K+E AI ++ +M ++G  P  V+YN LIN LC   RFG A      M   G
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI------------- 510
              +  TY+ +I GL     I+ A+ +  + L+ G +P V  YN LI             
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462

Query: 511 ----------------------HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
                                  G C  GK++ A   +  M K    PN  TY  ++DG 
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGY 522

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  D AL ++  + E      I +YN  + GL   +R S+A +F      +G+ P T
Sbjct: 523 CKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNT 582

Query: 609 ITWHILVRAVMNNGAS 624
           IT+  L+  +  N A+
Sbjct: 583 ITYTSLINGLCKNTAT 598



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 130/277 (46%), Gaps = 35/277 (12%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R+ D    ++  D        Y+ N+L+    +   + +A  ++ ++   G  P+++++N
Sbjct: 142 RVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFN 201

Query: 438 TLINGLCKVERFGE-----------------------------------AYSFVKEMLEK 462
           T+IN LCK  +  E                                   A+     M++ 
Sbjct: 202 TMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKD 261

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P+ +TYS LINGLC   +I  A+ +  +  +KG  P V  Y + I  LC  G+V+DA
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDA 321

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           + L  +M K+ C P++ TY  ++ GLF+ G  + A+ +++ +L+E L P+ ++YN  +  
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           LC+  R   A +  +     G L    T++ +++ + 
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLF 418


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/591 (28%), Positives = 295/591 (49%), Gaps = 31/591 (5%)

Query: 59  RILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM------NEIFGCEAGI-- 109
           ++L  ++ +    P++ A  V I  Y +    D A+ +   M        +F C + I  
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ +  +A+  +  + +  LKPD YSY T+++G  + G    A  + D+M + G+E  
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN L+ G  + G +  A +IW  L+M+  V P+ V Y+ +++GL K   F+    +W
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWH-LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +      K   T+ + I GLCK G +  AE ++ +M + G   D +TY  +IDG+C+A
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + + F++   M R+    ++  YN LI GL ++ ++ E   +   +  +    +  T+
Sbjct: 556 SNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 615

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
           G LI+G CK G L+KA     E+ E G                  GR+ +A  L+ +M  
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG     + C   +   I+ + ++       E  +    P  + YN  I GLCK  +  +
Sbjct: 676 HGF-FPDHEC--FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  F   +  KG+ PD  TY  LI+G   +  +D A +L  + L++G  P++  YN LI+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC +  V+ A +L+  + ++   PN+VTYNTL+DG  K G+ D A ++ + ++EE + P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +++Y+  + GLC    +  + + LN  +  G+    I +  LV+  + +G
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 174/641 (27%), Positives = 299/641 (46%), Gaps = 67/641 (10%)

Query: 19  HTALALFDSATREPGYAHSP-HLFHHILRRLID---PKLVVHVSRILELIEIQKCYC--- 71
           H   ++F        +   P HL   +L +L D   P     VSRI  L+ +++C     
Sbjct: 2   HRYFSIFTPPLPSRLHLRRPIHLSRTLLWKLRDESHPAPPELVSRICRLVLLRRCNAISK 61

Query: 72  -----PEDVALSVIQAYGKNSMPDKALDVFQ--------RMNEIFGCE-AGILCRKRQFE 117
                 +D+  +V++    N  P  +L  FQ        R N    C+   IL R R ++
Sbjct: 62  LNFVFSDDIVDAVLRNLRLN--PTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYD 119

Query: 118 KAKRFLNSL-------------WEK--------GLKPDVYSYGTVINGLVKSGDLLGALA 156
           + + +LN L             W++           P V+    ++   V+ G    AL 
Sbjct: 120 ETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD--MILKVYVEKGLTKNALY 177

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           VFD M + G   ++   N L++   K G+   A  ++++++    + P+V   ++M+N  
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI-RVGIVPDVFMVSIMVNAF 236

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G+ DE      +M+    E +  TY S I+G    G+VE A+ V + M E G+  + 
Sbjct: 237 CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNV 296

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWE 334
           VTY  +I G+C+  K+ E  ++   M  +  L  +  +Y +LI G    GK+D+A+ + +
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +       +      LING CK G          E+ E        A  ++ RM     
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRG----------EIHE--------AEGVITRMVDWNL 398

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K ++Y+ N+L++G+ +      A  L  +M ++G  PTV++YNTL+ GLC+V  F +A  
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M+++G  PD + YS L++GL + +  + A  L    L +GFT     +N +I GLC
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GK+ +A +++  MK   C P+ +TY TL+DG  K  +  +A ++   +  E + P I 
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIE 578

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            YN  + GL    R+ +  + L +   RG+ P  +T+  L+
Sbjct: 579 MYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 134/259 (51%), Gaps = 3/259 (1%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            +LN + + GE   A    +  +M + G   + +  + ++N F +  K++ A    K+M 
Sbjct: 196 SLLNNLVKNGETHTAHY--VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME 253

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P +V+Y++LING   +     A   +K M EKG   +++TY+LLI G C+  K+D
Sbjct: 254 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 486 MALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A K+     ++    PD   Y +LI G C  GK++DA++L   M +     NL   N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++G  K G+  +A  +   +++  L+PD  SYN  L G C     S+AF   +  L  GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 605 LPTTITWHILVRAVMNNGA 623
            PT +T++ L++ +   GA
Sbjct: 434 EPTVLTYNTLLKGLCRVGA 452


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 171/583 (29%), Positives = 286/583 (49%), Gaps = 52/583 (8%)

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC----------RKRQFEK 118
           CY    V   V+++Y + S+ DKAL +   + +  G   G+L            KR    
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     + E  + P+V++Y  +I G   +G++  AL +FD+M  +G   NVV YN LID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G+ K        ++   + ++  + PN+++YNV+INGLC+ GR  E   +   M +    
Sbjct: 249 GYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  TY + I G CK GN   A  ++ EM+  G+    +TY ++I   C+AG +    E 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS---TTHGVLING 354
            + M  +G C N  +Y  L+ G  + G ++EA   + +LRE N N  S    T+  LING
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA---YRVLREMNDNGFSPSVVTYNALING 424

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C  G +  AI +L +++E                   G   +  + +++++GF ++  +
Sbjct: 425 HCVTGKMEDAIAVLEDMKE------------------KGLSPDVVSYSTVLSGFCRSYDV 466

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ + +EM  KG  P  ++Y++LI G C+  R  EA    +EML  G  PD  TY+ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           IN  C    ++ AL+L  + ++KG  PDV  Y++LI+GL    +  +A +L   +     
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586

Query: 535 VPNLVTYNTLMD---------------GLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           VP+ VTY+TL++               G    G   +A +++  +L +  +PD  +YNI 
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + G C    +  A+    + +  G L  T+T   LV+A+   G
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 242/506 (47%), Gaps = 55/506 (10%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D AL +F +M E  GC   ++         C+ R+ +   + L S+  KGL+P++ SY  
Sbjct: 222 DVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VINGL + G +     V  EM  RG   + V YN LI G+ K+G++ +A  +    ++  
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRH 339

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-----KNEREKDSFTYCSFIHGLCKAG 255
            + P+V+TY  +I+ +CK G  +  +E  D+M+      NER     TY + + G  + G
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER-----TYTTLVDGFSQKG 394

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYN 314
            +  A RV REM ++G     VTYNA+I+G C  GK+++   + E M  KG   +VVSY+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ G   +  VDEA+ +   + EK    D+ T+  LI G C+                 
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE----------------- 497

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            + R  +A  L   M + G   + +T  +L+N +     LE A+ L  EM  KG  P VV
Sbjct: 498 -QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL---------------LINGLC 479
           +Y+ LINGL K  R  EA   + ++  +   P  +TY                 LI G C
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
               +  A ++    L K   PD T YNI+IHG C AG +  A  LY  M K   + + V
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHIL 565
           T   L+  L K G  ++   +  H+L
Sbjct: 677 TVIALVKALHKEGKVNELNSVIVHVL 702



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++  F +A      +   GL P V +Y ++I+ + K+G++  A+   D+M  RG+  N 
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  L+DGF +KG YM       R + +    P+VVTYN +ING C  G+ ++ + + +
Sbjct: 381 RTYTTLVDGFSQKG-YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK+     D  +Y + + G C++ +V+ A RV REMVE GI  D +TY+++I GFC   
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + KE  +L+E M R G   +  +Y  LI      G +++A+ +   + EK    D  T+ 
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559

Query: 350 VLINGLCKNGYLNKAIQILNEV--EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           VLINGL K     +A ++L ++  EE     +       + + ++   +   +  SL+ G
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVT-----YHTLIENCSNIEFKSVVSLIKG 614

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F     +  A  +F+ M  K   P   +YN +I+G C+     +AY+  KEM++ G+   
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +T   L+  L +  K++    +    L+     +     +L+      G ++  L + +
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734

Query: 528 NMKKRNCVPN 537
            M K   +PN
Sbjct: 735 EMAKDGFLPN 744



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 3/211 (1%)

Query: 415 ENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           E A  +FK +      C  T   ++ ++    ++    +A S V      G+ P +++Y+
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173

Query: 473 LLINGLCQSKK-IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +++   +SK+ I  A  +  + L+   +P+V  YNILI G C AG ++ AL L+  M+ 
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           + C+PN+VTYNTL+DG  K    D   ++   +  + L P++ISYN+ + GLC   RM +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               L +   RG     +T++ L++     G
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/508 (32%), Positives = 257/508 (50%), Gaps = 22/508 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   +++E   +  + + E GL+PD + YG  I   VK GDL  A+ +   M   GV   
Sbjct: 157 LVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPG 216

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN++I G  K+     A+++++ + ++  V PN +TYN +I+G CK G+ +E   + 
Sbjct: 217 VFVYNVVIGGLCKEKRMKDAEKLFDEM-LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIR 275

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RMK    E    T+ S ++GLC+A  +E A+RV  EM   G   D  TY  + DG  + 
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335

Query: 290 GKIKECFELWEVMGRKGCLNVVSY--NILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G +     L E   RKG + ++ Y  +IL+  L + G +++A  + +   E         
Sbjct: 336 GNVDASITLSEEAVRKG-VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              ++NG C+ G +NKA                   + + +M+  G + N  T NSL+  
Sbjct: 395 FNTIVNGYCQVGDINKAY------------------TTIEKMEAVGLRPNHVTYNSLVKK 436

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +   +E A    K+M  KG  P V +YNTLI+G  +   F   +  ++EM +KG KP+
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +I+Y  LIN LC+   I  A  +    + +G  P+  +YN+LI G C AGK++DA + + 
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFD 556

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  R  VP LVTYN L++GL K G   +A  + + I  + L  D+I+YN  + G  S  
Sbjct: 557 EMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAG 616

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
            +  A E        GI PT  T+H L+
Sbjct: 617 NVQKALELYETMKKSGIKPTLNTYHRLI 644



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 264/553 (47%), Gaps = 55/553 (9%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            ++A   +  +   G+ P V+ Y  VI GL K   +  A  +FDEM +R V  N + YN 
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LIDG+ K G    A  I ER+ +E +V P ++T+N ++NGLC+    +E   + + M+  
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVE-NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVY 316

Query: 236 EREKDSFTYCSFIHG-----------------------------------LCKAGNVEGA 260
               D FTY +   G                                   LCK GN+E A
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           E V ++ +E+G+    V +N +++G+C+ G I + +   E M   G   N V+YN L++ 
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
             E   ++EA    + + EK    +  T+  LI+G  ++   ++  QIL E+E+ G    
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                        +  + +A  ++  M   G   NA   N L++G   A KL++A   F 
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFD 556

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM  +   PT+V+YN LINGLCK  +  EA +   E+  KG   D+ITY+ LI+G   + 
Sbjct: 557 EMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAG 616

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +  AL+L     + G  P +  Y+ LI G    G V    ++Y  M + N VP+ V YN
Sbjct: 617 NVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYN 675

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+    + GD  KA  + + +  + ++PD ++YN  + G     RM      +ND   R
Sbjct: 676 ALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIR 735

Query: 603 GILPTTITWHILV 615
           G++P T T+ IL+
Sbjct: 736 GLIPKTETYDILI 748



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 265/551 (48%), Gaps = 35/551 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I  Y K    ++A ++ +RM ++   E  I         LCR +  E+A+R L  +  
Sbjct: 257 TLIDGYCKVGQLEEAFNIRERM-KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV 315

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G  PD ++Y T+ +G +K G++  ++ + +E   +GV+      +IL++   K+G+  +
Sbjct: 316 YGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEK 375

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+E+ ++  +E  + P  V +N ++NG C+ G  ++     ++M+      +  TY S +
Sbjct: 376 AEEVLKKF-LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
              C+  N+E AE+  ++MVE G+  +  TYN +IDG+ R+     CF++ E M +KG  
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV+SY  LI  L ++  + EA  I   +  +    ++  + +LI+G C  G L  A + 
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 368 LNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            +E+                     +G++ +A +L + + + G   +  T NSL++G+  
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS 614

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A  ++ A+ L++ M + G  PT+ +Y+ LI G C  E         +EML+    PD + 
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVI 673

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI+   +   +  A  L      +G  PD   YN LI G    G++     L ++MK
Sbjct: 674 YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R  +P   TY+ L+ G  K  D D A   +  + E    P +   +  + GL    R  
Sbjct: 734 IRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSH 793

Query: 591 DAFEFLNDALC 601
           DA     D +C
Sbjct: 794 DA-----DVIC 799



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 222/437 (50%), Gaps = 18/437 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++   EKA+  L    E GL P    + T++NG  + GD+  A    ++M   G+  N
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN L+  F +  +   A++  +++V E  V PNV TYN +I+G  +   FD C ++ 
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMV-EKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+K   + +  +Y   I+ LCK  N+  AE +  +MV  G+  +A  YN +IDG C A
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+K+ F  + E++ R+    +V+YNILI GL + GKV EA ++   +  K  + D  T+
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG------------EGRLADAASLVNRMDKHGCKL 396
             LI+G    G + KA+++   +++ G             G   +   LV ++ +   ++
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQM 665

Query: 397 NAYT----CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           N        N+L++ +++   ++ A  L   M  +G  P  ++YN LI G  K  R  + 
Sbjct: 666 NLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKV 725

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + V +M  +G  P   TY +LI G C+ K  D A     +  + GFTP V++ + LI G
Sbjct: 726 KNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITG 785

Query: 513 LCSAGKVEDALQLYSNM 529
           L   G+  DA  + S M
Sbjct: 786 LREEGRSHDADVICSEM 802


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 175/620 (28%), Positives = 300/620 (48%), Gaps = 35/620 (5%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           L+ E +   A   F S      + H+   +  ++ +L     V  V  +L+ ++++   C
Sbjct: 53  LRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISC 112

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRF 122
            ED+ ++VI  Y +  + ++AL +F R+ E FGC+  +         +  + +F+  +  
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIRE-FGCQPTVKIYNHLLDAMLSENRFQMIEPI 171

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            +++   G +P+VY+Y  ++  L K+  + GA  +  EM  +G E +VV Y  +I    K
Sbjct: 172 YSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSK 231

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A+E+  R        PNV  YN +ING C+  +  E   +  +M +   + +  
Sbjct: 232 LGKVEEARELSIRF------QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I  L   GNVE A  V+ +M   G   +  T+ +++ G+   G++ E   +W  M
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G   NVV+YN LI GL  +GK+ EA+S+   +    C+ + +T+G LI+G  K G L
Sbjct: 346 AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             A +I N++   G                     + A SL+ +M    C  N  T N+ 
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G   + ++E AI LF +M + GCSP + +YN +++GL K  R  EA   V EM EKG 
Sbjct: 466 IKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           + +++TY+ +  G C   K + ALKL  + L  G  PD   YN L +  C  GKV+ A+Q
Sbjct: 526 ELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQ 585

Query: 525 LYSNMKKRN-CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           L   +      VP +  Y +L+ G+      ++A+   + +L E +  +  ++N  ++GL
Sbjct: 586 LLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645

Query: 584 CSCSRMSDAFEFLNDALCRG 603
            +          L+D L  G
Sbjct: 646 FNSLGHLGPIHILDDILTSG 665



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 76/157 (48%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           K ++   +TY ++I  L +   +D    L  Q   +G +    ++  +I+     G  E 
Sbjct: 73  KAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQ 132

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+++  +++  C P +  YN L+D +           I++++  +   P++ +YNI LK
Sbjct: 133 ALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            LC  +R+  A + L +   +G  P  +++  ++ ++
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSM 229


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 255/511 (49%), Gaps = 20/511 (3%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           ++QF K       +   G + D + Y   I   VK  +L   +   D M +RGV  NV  
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN+LI G  ++     A+++++ +    ++  ++VTYN +I+G CK G  D   +M +RM
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMC-NINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           K+     +  T+ S + GLCK   ++ A  + +EM  +G   D  TY+ + DG  R    
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
               EL+E    KG  +N  + +IL+ GL + GKV++A  I +   E    AD   +   
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +NG C+ G +NKAI                    + RM+  G + N+ T NSL++ F   
Sbjct: 393 VNGYCRIGDMNKAILT------------------IERMESFGLRPNSITFNSLIDKFCDM 434

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +++ A    K+M+ KG +P+V +YNTLI+G  K+  F   +  +++M E G KP++++Y
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSY 494

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
             LIN LC+  KI  A  +    + +G  P+  +YN+LI G C  GKV+DAL+ +  M +
Sbjct: 495 GSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMR 554

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P LVTYN L+DGL K G   +A +    I      PD+I+YN  + G  +   +S 
Sbjct: 555 SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSK 614

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                      GI PT  T+H L+      G
Sbjct: 615 CLGLYETMKNLGIKPTVRTYHPLISGCSKEG 645



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 266/572 (46%), Gaps = 88/572 (15%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL+S+ ++G++P+V+ Y  +I GL +   +  A  +FDEM    +  ++V YN LIDG+ 
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G+   A ++ ER+  E SV PN++T+N +++GLCK  +  E   +   M+ N    D 
Sbjct: 258 KVGELDAAFKMRERM-KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDG 316

Query: 242 FTY---------CS--------------------------FIHGLCKAGNVEGAERVYRE 266
           +TY         C                            ++GLCK G VE AE + ++
Sbjct: 317 YTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
             E+G+  D V YN  ++G+CR G + +     E M   G   N +++N LI    +  +
Sbjct: 377 FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
           +D+A    + + EK       T+  LI+G  K    ++  QIL ++EE G          
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  +G++ +A  ++  M   G   NA   N L++G     K+++A+  F EM R  
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL---------- 478
            SPT+V+YN LI+GLCK  +  EA  F+ ++   G  PD+ITY+ LI+G           
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616

Query: 479 ------------------------CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
                                   C  + I++  KL  + LQ    PD  +YN +IH   
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYA 676

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G  + A  L+  M  +   P+ +TYN+L+ G F+ G      ++ N++  + L P   
Sbjct: 677 EIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKAD 736

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           +Y+I +KG C     S A+ +  + +    LP
Sbjct: 737 TYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 253/554 (45%), Gaps = 28/554 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K    D A  + +RM E         F      LC+ R+ ++A+  L  +   
Sbjct: 251 TLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN 310

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD Y+Y  + +GL++  D  GA+ ++++  E+G+  N    +IL++G  K+G   +A
Sbjct: 311 GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKA 370

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +EI ++   E  +  + V YN  +NG C+ G  ++ +   +RM+      +S T+ S I 
Sbjct: 371 EEILKKFT-ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLID 429

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
             C    ++ AE   ++M E G+     TYN +IDG+ +      CF++ E M   G   
Sbjct: 430 KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP 489

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVVSY  LI  L ++GK+ EA  +   +  +    ++  + +LI+G C  G +  A++  
Sbjct: 490 NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549

Query: 369 NEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +E+                     +G+L +A   + ++   G   +  T NSL++G+  A
Sbjct: 550 DEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANA 609

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +   + L++ M   G  PTV +Y+ LI+G C  E          EML+    PD + Y
Sbjct: 610 GNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVY 668

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+   +      A  L    L +G  PD   YN LI G    GK+ +   L +NMK 
Sbjct: 669 NAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKA 728

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +   P   TY+ L+ G     D   A   +  ++E    P+    N    GL    R+ +
Sbjct: 729 KELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQE 788

Query: 592 AFEFLNDALCRGIL 605
                ++   +GI+
Sbjct: 789 VQVICSEMNVKGII 802



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 33/233 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+K +  +A+ FL  +   G  PDV +Y ++I+G   +G++   L +++ M   G++  
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEIWERLV----------------------- 197
           V  Y+ LI G  K+G         + ++   + +R+V                       
Sbjct: 631 VRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQG 690

Query: 198 -METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            ++  ++P+ +TYN +I G  + G+     ++ + MK  E    + TY   + G C   +
Sbjct: 691 MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
             GA   YREMVE+    +A   N +  G  + G+++E   +   M  KG +N
Sbjct: 751 FSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIIN 803


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 250/477 (52%), Gaps = 27/477 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YNI++    + GD  RA EI+   +    V P +VTYN +INGLCK       +E+++ +
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +     D  TY + I  LCKAG++E A R++ +M   G   + VTY+ +I+G C+ G+I
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 293 KECFELWEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTT 347
            E  EL + M RK C    N+++YN  + GL +     EA  +   LR+ +   + D+ T
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
              LI+GLCK G +++A  + +++  GG                   ++  A +++  M 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV-----VSYNTLINGLCK 445
             G   +  T + L++ F +AS+++ A+ L   M+ +GC+P V     V++N LI G CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
              F +A +  +EM+ K  +PD++T+  LI+GLC++ +++ A  +       G  P+V  
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN L+HGLC +G++E+A Q    M    CVP+ +TY +L+  L +    D AL++ + + 
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                PD ++YNI + GL    +   A   L + + +G  P + T+      +  +G
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 196/374 (52%), Gaps = 26/374 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLK--PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC++    +A   + SL +  L+  PD  ++ T+I+GL K G +  A +VFD+M   G  
Sbjct: 154 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 213

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NV+ YN L++G  K     RA  + E +V +  V P+V+TY+V+++  CK  R DE LE
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKASRVDEALE 272

Query: 228 MWDRMKK-----NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           +   M       N    D  T+   I G CKAGN E A  ++ EMV   +  D +T+ A+
Sbjct: 273 LLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 332

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           IDG C+AG+++   ++ ++MG  G   NVV+YN L+ GL ++G+++EA    E +    C
Sbjct: 333 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 392

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             DS T+G L+  LC+    + A+Q+++E++  G                  G+   A +
Sbjct: 393 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 452

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           ++  M   G + +++T  +  +G  ++  L   + L + +  KG  P   + +++++ +C
Sbjct: 453 VLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVC 512

Query: 445 KVERFGEAYSFVKE 458
           +  +  +  + +KE
Sbjct: 513 RSGKLDDVKAMIKE 526



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 42/304 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E+A   + S+ +KG+ PDV +Y  +++   K+  +  AL +   M  RG   N
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285

Query: 170 V-----VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           V     V +NILI G  K G++ +A  ++E +V + ++ P+V+T+  +I+GLCK G+ + 
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEA 344

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++ D M       +  TY + +HGLCK+G +E A +   EMV SG   D++TY +++ 
Sbjct: 345 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 404

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             CRA +  +  +L   +   G   + V+YNIL+ GL ++GK ++AI++ E +  K    
Sbjct: 405 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 464

Query: 344 DSTTHGVLINGL-----------------------------------CKNGYLNKAIQIL 368
           DS T     +GL                                   C++G L+    ++
Sbjct: 465 DSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMI 524

Query: 369 NEVE 372
            E E
Sbjct: 525 KEFE 528



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 18/276 (6%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP--EDVALSVIQ 81
           L D+  +      +  L H +  R   P ++V       ++    C     E  +    +
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
              KN  PD            FG     LC+  Q E A+  L+ +   G+ P+V +Y  +
Sbjct: 317 MVAKNLQPDVM---------TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 367

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           ++GL KSG +  A    +EM   G   + + Y  L+    +     R  +  + LV E  
Sbjct: 368 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS---RTDDALQ-LVSELK 423

Query: 202 VY---PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
            +   P+ VTYN++++GL K G+ ++ + + + M     + DSFT+ +   GL ++GN+ 
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           G   + R ++  G+  DA T ++++D  CR+GK+ +
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 177/639 (27%), Positives = 310/639 (48%), Gaps = 52/639 (8%)

Query: 14  AEKNPHTA--LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           AE +P  A  L L    +RE  +++ P  F  + RRL+D       +    +  I+ C+ 
Sbjct: 269 AESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVD-ARRYAAAGRARIHLIKSCHS 327

Query: 72  PEDVA-----LSVIQAYG----------------KNSMPDKALDVFQRMNE--------I 102
            E +A     L ++   G                +  M    +D + RM          I
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +      LC+      A+  +  ++E  + PD ++Y ++I G  +  DL  AL VF++M 
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G E N V Y+ LI+G    G    A ++   +++   + P   T    I  LC  G +
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-GILPTAHTCTGPIIALCDMGCY 506

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++   ++  MK    E + +TY + I GLC +G ++ A  ++  M   G+F + VTYNA+
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+      +IK  F +  +MGR G   N+V+YN +I+G    G   +A+ +   + ++  
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           +A+  T+  +I G C +G    A++IL+ + +GG                  CK + ++ 
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------------------CKPDEWSY 668

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             L+ GF + SK+E+A  LF EM   G  P  V+Y  LI+G CK E+   A S ++ M  
Sbjct: 669 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 728

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +P++ TY++LI+GL +      A +LC   +++G  P+V  Y  +I GLC  G    
Sbjct: 729 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 788

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL++++ M ++ C+PNL+TY++L+  L + G  ++A  ++  +    L PD I+Y   ++
Sbjct: 789 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 848

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 ++  AF FL   +  G  PT  T+ +L++ + N
Sbjct: 849 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 887



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 260/528 (49%), Gaps = 19/528 (3%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    +   FL+ L + GL+  +++Y  ++  L + G     +  +  M   GV+ N++ 
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN +I+   K G+   A+ I ++ V E+ + P+  TY  MI G C+    D  L+++++M
Sbjct: 388 YNAVINALCKDGNVADAETIMKK-VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   E ++ TY + I+GLC +G V  A  + REM+  GI   A T    I   C  G  
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++ + L+  M  KGC  NV +Y  LI GL  +G +  AI ++  +       ++ T+  L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 352 INGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGC 394
           IN L +N  +  A  +LN +   G                  G    A  ++N M + G 
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N  T N+++ G+  +    +A+ +   M   GC P   SY  LI G CK+ +   A+ 
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              EM++ G  P+ +TY+ LI+G C+ +K+D A  L     + G  P+V  YN+LIHGL 
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
                  A +L   M +    PN+VTY  ++DGL K G    ALE++N ++E+   P+++
Sbjct: 747 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +Y+  ++ L    ++ +A     +    G++P  IT+  ++ A + +G
Sbjct: 807 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 228/472 (48%), Gaps = 20/472 (4%)

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           ++  D + + G+   +  Y+ L+    + G      + + R++ E  V PN++ YN +IN
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-GVQPNLLIYNAVIN 393

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            LCK G   +   +  ++ ++E   D+FTY S I G C+  +++ A +V+ +M + G   
Sbjct: 394 ALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEP 453

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIW 333
           + VTY+ +I+G C +G++ E F+L   M   G L    +    I  L + G  ++A  ++
Sbjct: 454 NTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 513

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             ++ K C  +  T+  LI+GLC +G L  AI                   L +RM + G
Sbjct: 514 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAI------------------GLFHRMSRDG 555

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N  T N+L+N  ++  +++ A  +   M R G    +V+YN +I G C +    +A 
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             +  ML++G   +++TY+ +I G C S     AL++       G  PD   Y  LI G 
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C   K+E A  L++ M      PN VTY  L+DG  K    D A  +  H+     RP++
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            +YN+ + GL   +  S A E     +  GI P  +T+  ++  +  NG+++
Sbjct: 736 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 249/553 (45%), Gaps = 53/553 (9%)

Query: 104  GCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
            GCE  +         LC     + A    + +   G+ P+  +Y  +IN LV++  +  A
Sbjct: 520  GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 579

Query: 155  LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
              V + M   G+ TN+V YN +I G+   GD  +A  +   + ++     N+VTYN +I 
Sbjct: 580  FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNTIIK 638

Query: 215  GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            G C  G     L + D M+    + D ++Y   I G CK   +E A  ++ EMV+ G+  
Sbjct: 639  GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 698

Query: 275  DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
            + VTY A+IDG+C+  K+     L E M R GC  NV +YN+LI GL +      A  + 
Sbjct: 699  NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 758

Query: 334  ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
            +++ E+    +  T+  +I+GLCKNG  + A+++ N                  +M + G
Sbjct: 759  KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN------------------KMIEQG 800

Query: 394  CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            C  N  T +SL+    Q  K+E A  LF E+ R G  P  ++Y  +I       +   A+
Sbjct: 801  CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 454  SFVKEMLEKGWKPDMITYSLLINGL------------------------CQSKKIDMALK 489
            +F+  M++ G +P + TY +LI GL                         Q+   D    
Sbjct: 861  NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 920

Query: 490  LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
            +  +  +      V + N L+  L +AG+  +A +L  +M  +   P+   YN+L+  L 
Sbjct: 921  MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 980

Query: 550  KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            +  + D A+ ++ H+  +     +  Y   +  LC   R  +A     + L R   P  +
Sbjct: 981  RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 1040

Query: 610  TWHILVRAVMNNG 622
               +L+  ++ +G
Sbjct: 1041 VQAVLIDGLLRDG 1053



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 252/565 (44%), Gaps = 58/565 (10%)

Query: 40   LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
            LFH + R  + P  V + + I  L+E ++       A  V+   G+N +    +  +  M
Sbjct: 547  LFHRMSRDGVFPNTVTYNALINILVENRRI----KYAFVVLNLMGRNGLFTNIV-TYNEM 601

Query: 100  NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
             + +       C     +KA   +N++ ++G   ++ +Y T+I G   SG+   AL + D
Sbjct: 602  IKGY-------CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 654

Query: 160  EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
             M + G + +   Y  LI GF K      A  ++  +V +  + PN VTY  +I+G CK 
Sbjct: 655  LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV-DDGLCPNEVTYTALIDGYCKD 713

Query: 220  GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
             + D    + + MK++    +  TY   IHGL K  N  GAE + + M+E GIF + VTY
Sbjct: 714  EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 773

Query: 280  NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
             AMIDG C+ G      E++  M  +GCL N+++Y+ LIR L + GKV+EA +++  L  
Sbjct: 774  TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 833

Query: 339  KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                 D  T+  +I     +G +  A   L                   RM K GC+   
Sbjct: 834  HGLIPDEITYVKMIEAYIMSGKVEHAFNFLG------------------RMIKAGCQPTL 875

Query: 399  YTCNSLMNG----FIQASK--------LENAIFLFKEMSRKGCSP------------TVV 434
            +T   L+ G    ++ A +        + N  F ++   +   S             +V 
Sbjct: 876  WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ 935

Query: 435  SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
              N L++ L    R+ EA   +  M+ +G  PD   Y+ L+  L + + +D+A+ +    
Sbjct: 936  VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHM 995

Query: 495  LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
              +G    +  Y  LI  LC   + ++A   + NM  R   P+ V    L+DGL + G  
Sbjct: 996  STQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYK 1055

Query: 555  DKALEIWNHILE-ERLRPDIISYNI 578
            D  +E   HI+E  R  P    Y I
Sbjct: 1056 DLCMEFL-HIMETRRYMPSFHIYTI 1079


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 309/627 (49%), Gaps = 46/627 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLV------------VHVSRILELI 64
           +P  AL LF  A  +PG+  S  +F  IL  L    L+             ++ RI++++
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 65  EIQKCYCPEDVALSV----IQAYGKNSMPDKALDVFQRM------NEIFGCEA--GILCR 112
            I  C   E V++ +    I  Y K SM ++ L VF +M       ++  C     IL  
Sbjct: 154 -IGGCVSSE-VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRD 211

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    KA     ++ E G+KP + +Y T+++   K G +   L +  EM  RG   N V 
Sbjct: 212 KDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVT 271

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN+LI+G  KKG++ +AK +   + ++T +  +  TYN +I G    G   E L + + M
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEM-LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                     TY SFI+GLCK G +  A +   +M+ + +  D V+YN +I G+CR G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            + F L++ +        +V+YN L+ GL   G+++ A  +   +  +    D  T+ +L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +NG CK G L+ A +  +E                  M   G +L++Y   + + G ++ 
Sbjct: 451 VNGSCKMGSLSMAQEFFDE------------------MLHEGLELDSYAYATRIVGELKL 492

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
                A  L +EM  KG  P ++ YN +++GLCK+    EA   +++M+  G  PD +TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+   ++ ++    ++  + L KG TP V  Y +LIHG    G++E A   +S M++
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +  +PN++TYN+L++GL K    D+A   +  ++E+ + P+  SY I +   C+     +
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 592 AFEFLNDALCRGILPTTITWHILVRAV 618
           A       L RG+ P + T   L++ +
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 69/150 (46%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           LLI    +   ++  L +  + ++   +PDV   N ++  L     +  A+++Y  M + 
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P +VTYNTL+D   K G   + L++ + +      P+ ++YN+ + GL        A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + + L  G+  +  T++ L+    N G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKG 318



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%)

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            V + ++LI        VE  L ++  M K    P++   N ++  L       KA+E++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             + E  ++P I++YN  L   C   ++    + L++   RG  P  +T+++L+  +   
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 622 G 622
           G
Sbjct: 283 G 283


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 275/535 (51%), Gaps = 28/535 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +        FG   G   +K+Q+       N +   G+  +VYS   +
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +   +  A+++  +MF+ G+      +N LI+G   +G    A E++  +V    
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNV++YN +INGLCK G     ++++ +M++N  + D  TY + I  LCK   V  A 
Sbjct: 190 -EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
               EM++ GI  +  TYN M+ GFC  G++ E   L+ E++GR    + V+  IL+ GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V EA  ++E + EK    + +T+  L++G C    +N+A ++  E+         
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF-EI--------- 358

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M + GC    ++ N L+NGF ++ +++ A  L  EM  K  +P  V+Y+TL+
Sbjct: 359 --------MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            GLC+  R  EA +  KEM   G  P+++TYS+L++G C+   +D ALKL     +K   
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  + ILI G+  AGK+E A +L+S +      P + TY  ++ GL K G  D+A ++
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + ++   P+  SYN+ ++G       S A   +++ + +       T+ +L+
Sbjct: 531 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 262/495 (52%), Gaps = 20/495 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P V  +G  +    K       +++ ++M   GV  NV   N+LI+   +      A  
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I  ++  +  ++P   T+N +INGLC  G+  E +E+++ M +   E +  +Y + I+GL
Sbjct: 145 ILGKM-FKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGL 203

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNV 310
           CK GN   A  V+++M ++G   D VTYN +ID  C+   + +  E L E++ R    NV
Sbjct: 204 CKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNV 263

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN ++ G    G+++EA  +++ +  ++   D+ T  +L++GLCK             
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK------------- 310

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                EG +++A  +   M + G + N  T N+LM+G+     +  A  +F+ M R+GC+
Sbjct: 311 -----EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V SYN LING CK  R  EA S + EM  K   PD +TYS L+ GLCQ  +   AL +
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  P++  Y+IL+ G C  G +++AL+L  +M+++   PN+V +  L++G+F 
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI 485

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  + A E+++ +  + +RP I +Y + +KGL       +A++        G LP + +
Sbjct: 486 AGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 545

Query: 611 WHILVRAVMNNGAST 625
           ++++++  + N  S+
Sbjct: 546 YNVMIQGFLQNQDSS 560



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 218/438 (49%), Gaps = 20/438 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + ++A    N +  +G +P+V SY T+INGL K+G+   A+ VF +M + G + +
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPD 227

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +ID   K      A E    + ++  + PNV TYN M++G C  G+ +E   ++
Sbjct: 228 VVTYNTIIDSLCKDRLVNDAMEFLSEM-LDRGIPPNVFTYNCMVHGFCILGQLNEATRLF 286

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M   +   D+ T    + GLCK G V  A  V+  M E G+  +  TYNA++DG+C  
Sbjct: 287 KEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQ 346

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + E  +++E+M R+GC   V SYNILI G  ++ ++DEA S+   +  K  N D+ T+
Sbjct: 347 RLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTY 406

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ GLC+ G   +A+ I  E                  M  +G   N  T + L++GF
Sbjct: 407 STLMQGLCQFGRPKEALNIFKE------------------MCSYGLLPNLVTYSILLDGF 448

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A+ L K M  K   P +V +  LI G+    +   A     ++   G +P +
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTI 508

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I GL +    D A  L  +    GF P+   YN++I G         A++L   
Sbjct: 509 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 568

Query: 529 MKKRNCVPNLVTYNTLMD 546
           M  +    NL T+  L+D
Sbjct: 569 MVGKRFSANLSTFQMLLD 586



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA +   RM +   + +       +  F +  +    + L  +M   G +  V S N LI
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N LC++     A S + +M + G  P   T++ LINGLC   KI  A++L  + +++G  
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V  YN +I+GLC  G    A+ ++  M++  C P++VTYNT++D L K    + A+E 
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + +L+  + P++ +YN  + G C   ++++A     + + R ++P T+T  ILV  +  
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310

Query: 621 NG 622
            G
Sbjct: 311 EG 312



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 119/204 (58%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M R    P+V  +   +    K +++    S   +M   G   ++ + ++
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN LC+   +D A+ +  +  + G  P  + +N LI+GLC+ GK+++A++L++ M +R 
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+++YNT+++GL KTG+   A++++  + +   +PD+++YN  +  LC    ++DA 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           EFL++ L RGI P   T++ +V  
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHG 272


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 181/628 (28%), Positives = 311/628 (49%), Gaps = 48/628 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLV------------VHVSRILELI 64
           +P  AL LF  A  +PG+  S  +F  IL  L    L+             ++ RI++++
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 65  EIQKCYCPEDVALSV----IQAYGKNSMPDKALDVFQRM------NEIFGCEA--GILCR 112
            I  C   E V++ +    I  Y K SM ++ L VF +M       ++  C     IL  
Sbjct: 154 -IGGCVSSE-VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRD 211

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K    KA     ++ E G+KP + +Y T+++   K G +   L +  EM  RG   N V 
Sbjct: 212 KDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVT 271

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN+LI+G  KKG++ +AK +   + ++T +  +  TYN +I G    G   E L + + M
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEM-LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                     TY SFI+GLCK G +  A +   +M+ + +  D V+YN +I G+CR G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 293 KECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            + F L++ + R   L   +V+YN L+ GL   G+++ A  +   +  +    D  T+ +
Sbjct: 391 MKAFLLFDEL-RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L+NG CK G L+ A +  +E                  M   G +L++Y   + + G ++
Sbjct: 450 LVNGSCKMGSLSMAQEFFDE------------------MLHEGLELDSYAYATRIVGELK 491

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                 A  L +EM  KG  P ++ YN +++GLCK+    EA   +++M+  G  PD +T
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ +I+   ++ ++    ++  + L KG TP V  Y +LIHG    G++E A   +S M+
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           ++  +PN++TYN+L++GL K    D+A   +  ++E+ + P+  SY I +   C+     
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAV 618
           +A       L RG+ P + T   L++ +
Sbjct: 672 EALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 189/377 (50%), Gaps = 20/377 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +   A + L+ +    L PDV SY T+I G  + G+L+ A  +FDE+    +   
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN L+DG  ++G+   A+++   ++ E  + P++VTY +++NG CK G      E +
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     E DS+ Y + I G  K G+   A  +  EM+  G   D + YN ++DG C+ 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E  EL + M   G + + V+Y  +I   LENG++ +   I+  +  K       T+
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLI+G                    G+GRL  A    + M + G   N  T NSL+NG 
Sbjct: 588 TVLIHG------------------HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +++ A   F EM  KG  P   SY  LIN  C +  + EA S  K+ML++G +PD 
Sbjct: 630 CKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689

Query: 469 ITYSLLINGLCQSKKID 485
            T+S L+  L +  K+ 
Sbjct: 690 CTHSALLKQLGKDCKLQ 706



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 69/150 (46%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           LLI    +   ++  L +  + ++   +PDV   N ++  L     +  A+++Y  M + 
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P +VTYNTL+D   K G   + L++ + +      P+ ++YN+ + GL        A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + + L  G+  +  T++ L+    N G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKG 318



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%)

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            V + ++LI        VE  L ++  M K    P++   N ++  L       KA+E++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             + E  ++P I++YN  L   C   ++    + L++   RG  P  +T+++L+  +   
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 622 G 622
           G
Sbjct: 283 G 283


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 303/626 (48%), Gaps = 52/626 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           +P TAL+ F+     PG+ H+ H +  +L  LI  +L+  V+  + +  I+ C   EDV 
Sbjct: 80  DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL-GVAEKIRISMIKSCCSIEDVL 138

Query: 77  L------------------------SVIQAYGKNSMPDKALDVFQRM--NEI------FG 104
                                    +++ +  K  + D+   V+  +  N+I      F 
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFN 198

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                 C+     +A+ + + + + GL PD ++Y ++I G  ++  +  A  VF  M ++
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + N V Y  LI G  + G    A +++  +  E +  P V TY V+I  L   GR  E
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMT-EDNCCPTVRTYTVLIYALSGSGRKVE 317

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L +++ MK+   E +  TY   I GLCK   ++ A ++  EM E G+    VTYNA+ID
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+C+ G I + FE+ ++M    C  N  +YN LI GL +  KV +A+++   + E+  + 
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
              T+  LI+G CK   L  A ++L+ + E G                 EGR+ +A +L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + +   G K N     +L++G+ +  K++ A  L + M    C P   +YN LI GLCK 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
           ++  EA S V +ML  G KP ++TY++LI  + +    D ALK+    +  G+ PDV  Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
              +H   S G +E+   + + M +   +P+LVTY  L+DG  + G   +A +    +++
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDA 592
              +P +   +I +K L   +RM + 
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 262/532 (49%), Gaps = 44/532 (8%)

Query: 117 EKAKRFLNSL-WEKGLKPDVYSYGTVINGLVKS--------------------GDLLGAL 155
           + A  F N +    G K +V+SY +++N L+++                     D+L  L
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVL 141

Query: 156 AVFDEMFERG---VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            VF +M   G    +  + CYN ++    K       K ++  L +   + PN+ T+N M
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL-LNNQISPNIYTFNAM 200

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +NG CK G   E      ++ +     D+FTY S I G C+   V+ A  V+  M + G 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAIS 331
             + V+Y  +I G C AG+I E  +L+  M    C   V +Y +LI  L  +G+  EA++
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           ++  ++EK C  +  T+ VLI+GLCK                  E ++ +A  +++ M +
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCK------------------ENKMDEARKMLSEMSE 362

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T N+L++G+ +   +++A  +   M    C P   +YN LI GLCK  +  +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A + + +MLE+   P +ITY+ LI+G C+   ++ A +L     + G  PD   Y++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G+VE+A  L+ ++K +    N V Y  L+DG  K G  D A  +   +L +   P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  +YN+ ++GLC   +M +A   +   L  G+ PT +T+ IL+  ++ +GA
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 156/587 (26%), Positives = 262/587 (44%), Gaps = 65/587 (11%)

Query: 71  CPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAK 120
           CP     +V I A   +    +AL++F  M E  GCE  +         LC++ + ++A+
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + L+ + EKGL P V +Y  +I+G  K G +  A  + D M       N   YN LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            KK    +A  +  ++ +E  + P+++TYN +I+G CK    +    +   M +N    D
Sbjct: 415 CKKRKVHKAMALLNKM-LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +TY  FI  LCK G VE A  ++  +   G+  + V Y A+IDG+C+ GKI   + L E
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M    CL N  +YN+LI GL +  K+ EA S+   +          T+ +LI  + K+G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
             + A+++ N +   G                 +G L +   ++ +M++ G   +  T  
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE----------- 451
            L++G+ +      A    K M   GC P++   + LI  L    R  E           
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 452 ------------------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
                             A    ++M+E G   D+  Y  LI G CQ ++++ A  L   
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             ++G +P   +YN L+   C  G   +A++L   M +   +P L +Y  L+ GL+  G 
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLC------SCSRMSDAFE 594
            +KA  +++ +L      D +++ + + GL        CS + D  E
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 246/528 (46%), Gaps = 49/528 (9%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A    N + EKG +P+V++Y  +I+GL K   +  A  +  EM E+G+  +VV YN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DG+ K+G    A EI + L+   S  PN  TYN +I GLCK  +  + + + ++M + + 
Sbjct: 377 DGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                TY S IHG CK  ++E A R+   M E+G+  D  TY+  ID  C+ G+++E   
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L++ +  KG   N V Y  LI G  + GK+D A S+ E +    C  +S T+ VLI GLC
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                  E ++ +A+SLV +M   G K    T   L+   ++    ++
Sbjct: 556 K------------------EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +F  M   G  P V +Y   ++         E    + +M E+G  PD++TY++LI+
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED--------------- 521
           G  +      A       +  G  P + + +ILI  L    ++++               
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNS 717

Query: 522 --------------ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
                         AL+L+  M +  C  ++  Y  L+ G  +    ++A  + +H+ E 
Sbjct: 718 VDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 777

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + P    YN  L   C     ++A   ++  +  G+LP   ++ +LV
Sbjct: 778 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 31/306 (10%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G + +   F+ A +  N +   G +PDV +Y   ++     G L     V  +M E G+ 
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE--- 224
            ++V Y +LIDG+ + G   RA +  + +V +T   P++   +++I  L    R  E   
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMV-DTGCKPSLYIVSILIKNLSHENRMKETRS 705

Query: 225 --------------------------CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                                      L+++++M ++    D   Y + I G C+   +E
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILI 317
            A+ +   M E G+      YN+++D  C+ G   E   L + M   G L ++ SY +L+
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL   G  ++A +++  L     N D     VLI+GL K   +++  ++++ +EE    
Sbjct: 826 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDAT 885

Query: 378 RLADAA 383
             AD A
Sbjct: 886 AQADIA 891



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 9/177 (5%)

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           AL +F++M E        I+G      C++ + E+A+  ++ + E+G+ P    Y ++++
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
              K G    A+ + D M E G+   +  Y +L+ G + +G   +AK ++  L+     Y
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 851

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + V + V+I+GL K    DEC E+ D M++ +    +   C+ +  L  A + +GA
Sbjct: 852 -DEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGA 907


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 303/626 (48%), Gaps = 52/626 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           +P TAL+ F+     PG+ H+ H +  +L  LI  +L+  V+  + +  I+ C   EDV 
Sbjct: 80  DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL-GVAEKIRISMIKSCCSIEDVL 138

Query: 77  L------------------------SVIQAYGKNSMPDKALDVFQRM--NEI------FG 104
                                    +++ +  K  + D+   V+  +  N+I      F 
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFN 198

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                 C+     +A+ + + + + GL PD ++Y ++I G  ++  +  A  VF  M ++
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + N V Y  LI G  + G    A +++  +  E +  P V TY V+I  L   GR  E
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMT-EDNCCPTVRTYTVLIYALSGSGRKVE 317

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L +++ MK+   E +  TY   I GLCK   ++ A ++  EM E G+    VTYNA+ID
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+C+ G I + FE+ ++M    C  N  +YN LI GL +  KV +A+++   + E+  + 
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
              T+  LI+G CK   L  A ++L+ + E G                 EGR+ +A +L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + +   G K N     +L++G+ +  K++ A  L + M    C P   +YN LI GLCK 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
           ++  EA S V +ML  G KP ++TY++LI  + +    D ALK+    +  G+ PDV  Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
              +H   S G +E+   + + M +   +P+LVTY  L+DG  + G   +A +    +++
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDA 592
              +P +   +I +K L   +RM + 
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 262/532 (49%), Gaps = 44/532 (8%)

Query: 117 EKAKRFLNSL-WEKGLKPDVYSYGTVINGLVKS--------------------GDLLGAL 155
           + A  F N +    G K +V+SY +++N L+++                     D+L  L
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVL 141

Query: 156 AVFDEMFERG---VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            VF +M   G    +  + CYN ++    K       K ++  L +   + PN+ T+N M
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL-LNNQISPNIYTFNAM 200

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +NG CK G   E      ++ +     D+FTY S I G C+   V+ A  V+  M + G 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAIS 331
             + V+Y  +I G C AG+I E  +L+  M    C   V +Y +LI  L  +G+  EA++
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           ++  ++EK C  +  T+ VLI+GLCK                  E ++ +A  +++ M +
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCK------------------ENKMDEARKMLSEMSE 362

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T N+L++G+ +   +++A  +   M    C P   +YN LI GLCK  +  +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A + + +MLE+   P +ITY+ LI+G C+   ++ A +L     + G  PD   Y++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G+VE+A  L+ ++K +    N V Y  L+DG  K G  D A  +   +L +   P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  +YN+ ++GLC   +M +A   +   L  G+ PT +T+ IL+  ++ +GA
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 272/594 (45%), Gaps = 48/594 (8%)

Query: 71  CPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAK 120
           CP     +V I A   +    +AL++F  M E  GCE  +         LC++ + ++A+
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + L+ + EKGL P V +Y  +I+G  K G +  A  + D M       N   YN LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            KK    +A  +  ++ +E  + P+++TYN +I+G CK    +    +   M +N    D
Sbjct: 415 CKKRKVHKAMALLNKM-LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +TY  FI  LCK G VE A  ++  +   G+  + V Y A+IDG+C+ GKI   + L E
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M    CL N  +YN+LI GL +  K+ EA S+   +          T+ +LI  + K+G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
             + A+++ N +   G                 +G L +   ++ +M++ G   +  T  
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE----------- 451
            L++G+ +      A    K M   GC P++   + LI  L    R  E           
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 452 -------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                  A    ++M+E G   D+  Y  LI G CQ ++++ A  L     ++G +P   
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +YN L+   C  G   +A++L   M +   +P L +Y  L+ GL+  G  +KA  +++ +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           L      D +++ + + GL     + +  E ++    +G  P  +T+ +L+  +
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 250/526 (47%), Gaps = 38/526 (7%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A    N + EKG +P+V++Y  +I+GL K   +  A  +  EM E+G+  +VV YN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DG+ K+G    A EI + L+   S  PN  TYN +I GLCK  +  + + + ++M + + 
Sbjct: 377 DGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                TY S IHG CK  ++E A R+   M E+G+  D  TY+  ID  C+ G+++E   
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L++ +  KG   N V Y  LI G  + GK+D A S+ E +    C  +S T+ VLI GLC
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                  E ++ +A+SLV +M   G K    T   L+   ++    ++
Sbjct: 556 K------------------EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +F  M   G  P V +Y   ++         E    + +M E+G  PD++TY++LI+
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED--------------- 521
           G  +      A       +  G  P + + +ILI  L    ++++               
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLE 717

Query: 522 ---ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
              AL+L+  M +  C  ++  Y  L+ G  +    ++A  + +H+ E  + P    YN 
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 777

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            L   C     ++A   ++  +  G+LP   ++ +LV  +   G++
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 823


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 163/512 (31%), Positives = 263/512 (51%), Gaps = 21/512 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +++   + K  L+ + +  L P  Y+ G +INGL + G +  A  VF+ M   GV+ N V
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV 482

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G  ++G +  A  I  +++ +  V P+V+ YN +I GLCK  + +E  +    
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRIL-KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   + + +TY + IHG CK+G ++ A+R ++EM+  GI  + V   A+IDG+C+ G 
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601

Query: 292 IKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
             E   ++  M GR    +V +Y+ LI GLL NGK+  A+ +     EK    D  T+  
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           +I+G CK G + KA Q                  L   M + G   N  T N+L+NG  +
Sbjct: 662 IISGFCKQGGIGKAFQ------------------LHEYMCQKGISPNIITYNALINGLCK 703

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A ++E A  LF  +  KG +   V+Y T+I+G CK     +A+    EM  KG  PD   
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS LI+G  +    + AL L  + +QKGF    ++ N L+ G C +GKV +A QL  +M 
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEANQLLEDMV 822

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            ++  P+ VTY  L+D   KTG   +A + +  + +  L P+ ++Y   L G     R S
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRS 882

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + F   ++ + + I P  +TW +++ A +  G
Sbjct: 883 EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 266/516 (51%), Gaps = 20/516 (3%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LCR  + ++A      + +KGL  DV++Y  +I+G  K      A  + +EMF +G++
Sbjct: 279 GGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLK 338

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
              V Y  LIDGF ++GD   A  + E + +   V  N+ TYN ++ G+CK G  ++   
Sbjct: 339 PGHVAYTALIDGFMRQGDSGEAFRVKEEM-LARGVKLNLFTYNALVKGVCKFGDMEKADA 397

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + + M     + D+ TY + I G  K  N    + +  EM +S +   A T   +I+G C
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC 457

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G I++   ++E+M   G   N V Y  LI+G ++ G+  EA+ I +++ +K    D  
Sbjct: 458 RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  +I GLCK+  + +A   L E                  M + G K N YT  +L++
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVE------------------MIERGLKPNVYTYGALIH 559

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G+ ++ +++ A   FKEM   G +P  V    LI+G CK     EA S  + ML +   P
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP 619

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ TYS LI+GL ++ K+  A++L  +FL+KG  PDV  YN +I G C  G +  A QL+
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M ++   PN++TYN L++GL K G+ ++A E+++ I  + L  + ++Y   + G C  
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +S AF   ++   +G+ P +  +  L+      G
Sbjct: 740 GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 264/539 (48%), Gaps = 54/539 (10%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++++  +AK  L  ++ KGLKP   +Y  +I+G ++ GD   A  V +EM  RGV+ N+ 
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLF 377

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN L+ G  K GD  +A  +   ++M   + P+  TYN MI G  K        ++   
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIM-VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MKK+     ++T    I+GLC+ G++E A RV+  MV  G+  +AV Y  +I G  + G+
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            +E   + +VM +KG   +V+ YN +I GL ++ K++EA      + E+    +  T+G 
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G CK+G +  A +   E                  M   G   N   C +L++G+ +
Sbjct: 557 LIHGYCKSGEMQVADRYFKE------------------MLGCGIAPNDVVCTALIDGYCK 598

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                 A  +F+ M  +   P V +Y+ LI+GL +  +   A   + E LEKG  PD+ T
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ +I+G C+   I  A +L     QKG +P++  YN LI+GLC AG++E A +L+  + 
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY-------------- 576
            +    N VTY T++DG  K+G+  KA  +++ +  + + PD   Y              
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778

Query: 577 --------------------NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                               N  + G C   ++ +A + L D + + + P  +T+ IL+
Sbjct: 779 KALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 279/554 (50%), Gaps = 30/554 (5%)

Query: 79  VIQAYGKNSMPDKALDVF---QRMNEIFG--CEAGILC---RKRQFEKAKRFLNSLWEKG 130
           +I  Y K  + D+A+  F   +R   + G  C  G+L    +  + E   RF N + E  
Sbjct: 172 LIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEAN 231

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +  DVY+Y  +IN   ++G+      +  EM E+G   ++V YN++I G  + G+   A 
Sbjct: 232 VLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAF 291

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+ ++L+ +  +  +V TY+++I+G  K  R  E   M + M     +     Y + I G
Sbjct: 292 EL-KKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
             + G+   A RV  EM+  G+ ++  TYNA++ G C+ G +++   L   M   G   +
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
             +YN +I G L+         +   +++ N    + T G++INGLC++           
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH----------- 459

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                  G + DA+ +   M   G K NA    +L+ G +Q  + + A+ + K M +KG 
Sbjct: 460 -------GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P V+ YN++I GLCK  +  EA  ++ EM+E+G KP++ TY  LI+G C+S ++ +A +
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              + L  G  P+  +   LI G C  G   +A  ++  M  R+  P++ TY+ L+ GL 
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC-RGILPTT 608
           + G    A+E+ +  LE+ L PD+ +YN  + G C    +  AF+ L++ +C +GI P  
Sbjct: 633 RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ-LHEYMCQKGISPNI 691

Query: 609 ITWHILVRAVMNNG 622
           IT++ L+  +   G
Sbjct: 692 ITYNALINGLCKAG 705



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 248/486 (51%), Gaps = 20/486 (4%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+ R+ E+AK +L  + E+GLKP+VY+YG +I+G  KSG++  A   F EM   G+  N
Sbjct: 526  LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN 585

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
             V    LIDG+ K+G    A  I+ R ++  SV+P+V TY+ +I+GL + G+    +E+ 
Sbjct: 586  DVVCTALIDGYCKEGSTTEATSIF-RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
                +     D FTY S I G CK G +  A +++  M + GI  + +TYNA+I+G C+A
Sbjct: 645  SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704

Query: 290  GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            G+I+   EL++ +  KG   N V+Y  +I G  ++G + +A  +++ +  K    DS  +
Sbjct: 705  GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVY 764

Query: 349  GVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAASLVNRM-DK 391
              LI+G  K G   KA+ +  E  + G                 G++ +A  L+  M DK
Sbjct: 765  SALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDK 824

Query: 392  HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            H  K +  T   L++   +   L+ A   F +M ++   P  ++Y  L++G     R  E
Sbjct: 825  H-VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSE 883

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
             ++   EM+ K  +PD +T+S++I+   +       LKL    L+KG      + ++LI 
Sbjct: 884  MFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLID 943

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             LC    V + L++   ++++    +L T +TL+    K G  D A  +   ++  +  P
Sbjct: 944  PLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVP 1003

Query: 572  DIISYN 577
            D    N
Sbjct: 1004 DSTELN 1009



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 223/447 (49%), Gaps = 19/447 (4%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            C++    +A      +  + + PDV +Y  +I+GL+++G L GA+ +  E  E+G+  +V
Sbjct: 597  CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
              YN +I GF K+G   +A ++ E +  +  + PN++TYN +INGLCK G  +   E++D
Sbjct: 657  FTYNSIISGFCKQGGIGKAFQLHEYMC-QKGISPNIITYNALINGLCKAGEIERARELFD 715

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +       ++ TY + I G CK+GN+  A R++ EM   G+  D+  Y+A+IDG  + G
Sbjct: 716  GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775

Query: 291  KIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
              ++   L+    +KG  +  S N L+ G  ++GKV EA  + E + +K+   D  T+ +
Sbjct: 776  NTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835

Query: 351  LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            LI+  CK G+L +A Q   +                  M K     NA T  +L++G+  
Sbjct: 836  LIDYHCKTGFLKEAEQFFVD------------------MQKRNLMPNALTYTALLSGYNM 877

Query: 411  ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            A +      LF EM  K   P  V+++ +I+   K     +    V +ML+KG       
Sbjct: 878  AGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNV 937

Query: 471  YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
              +LI+ LC+ + +   LK+  +  ++G    +   + L+     AGK++ A ++  +M 
Sbjct: 938  CHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMV 997

Query: 531  KRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            +   VP+    N L++    + D + A
Sbjct: 998  RFKWVPDSTELNDLINVEQDSTDSENA 1024



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 193/434 (44%), Gaps = 29/434 (6%)

Query: 193 WERLV--METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK-DSFTYCSFIH 249
           WE L+  +   + P+VV ++V+   +    R  +    W + +    +K  SF+  + I 
Sbjct: 54  WESLLPLVSNKLSPDVV-HSVITKQVNDPKRLLDFFN-WVQFQMGFSQKLQSFSILALI- 110

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            LC +     A+ V  +M    I + +  Y+ ++D   ++ K  +   +           
Sbjct: 111 -LCNSRLFSRADSVVNQM----IMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDR 165

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V + +LI G  + G  DEA+S +           +  +G ++  LC NG L+  ++   
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFF---------LGAKRNGFVVGLLCCNGLLSDLLK--- 213

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   +L       N M +     + YT   L+N   +A   +    L  EM  KGC
Sbjct: 214 ------ANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGC 267

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP++V+YN +I GLC+     EA+   K M +KG   D+ TYS+LI+G  + K+   A  
Sbjct: 268 SPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKL 327

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +   KG  P    Y  LI G    G   +A ++   M  R    NL TYN L+ G+ 
Sbjct: 328 MLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVC 387

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K GD +KA  + N ++   ++PD  +YN  ++G       S   + L++     ++PT  
Sbjct: 388 KFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAY 447

Query: 610 TWHILVRAVMNNGA 623
           T  +++  +  +G+
Sbjct: 448 TCGMIINGLCRHGS 461


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 304/637 (47%), Gaps = 56/637 (8%)

Query: 11  LLKAEKNPHTALALFDSATRE-PGYAHSPHLFH---HIL---RRLIDPKLVV-------H 56
           L K  +N        DS T   P + HS   F    HIL   RRL D + V+        
Sbjct: 104 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG 163

Query: 57  VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           VSR+ E++E            S++  YG         D+  R             + R+ 
Sbjct: 164 VSRV-EIVE------------SLVLTYGNCGSNPLVFDLLVR----------TYVQARKL 200

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +       L  KGL   + +  +++ GLVK G +  A  ++ E+   GV+ NV   NI+
Sbjct: 201 REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIM 260

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+   K       K     +  E  V+P+VVTYN +IN  C+ G  +E  E+ D M    
Sbjct: 261 INALCKNQKIENTKSFLSDM-EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            +   FTY + I+GLCK G    A+ V  EM++ G+  D  TYN ++   CR   + +  
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            +++ M  +G + ++VS++ LI  L +NG +D+A+  +  ++      D+  + +LI G 
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
           C+NG +++A+++ +E+ E G                 E  L++A  L   M + G   + 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           YT  +L+NG+ +   +  A+ LF+ M ++   P VV+YNTLI+G CK     +      +
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+ +   P+ I+Y +LING C    +  A +L  + ++KGF   +   N ++ G C AG 
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
              A +  SNM  +  VP+ +TYNTL++G  K  + D+A  + N +    L PD+I+YN+
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            L G     RM +A   +   + RG+ P   T+  L+
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 239/463 (51%), Gaps = 20/463 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+   E+A   ++S+  KGLKP V++Y  +INGL K+G  L A  V DEM + G+  + 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+    +  + M A+ I++ +  +  V P++V+++ +I  L K G  D+ L+ + 
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK      D+  Y   I G C+ G +  A +V  EM+E G  +D VTYN +++G C+  
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E  EL+  M  +G   +  ++  LI G  ++G +++A++++E++ ++N   D  T+ 
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK   + K  ++ N+                  M       N  +   L+NG+ 
Sbjct: 539 TLIDGFCKGSEMEKVNELWND------------------MISRRIYPNHISYGILINGYC 580

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  L+ EM  KG   T+++ NT++ G C+     +A  F+  ML KG  PD I
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING  + + +D A  L  +    G  PDV  YN++++G    G++++A  +   M
Sbjct: 641 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            +R   P+  TY +L++G     +  +A  + + +L+    PD
Sbjct: 701 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 170/587 (28%), Positives = 284/587 (48%), Gaps = 38/587 (6%)

Query: 73  EDVALSVIQAYGKNSMP--DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++ALS     G +       +  V+   + +F             ++A   +N     G
Sbjct: 113 QELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSG 172

Query: 131 LKPDVYSYGTVINGLVKS-GDL-LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
             P V SY +V++ +V+S G + L A  V+ EM    V  NV  YNILI GF   G+  +
Sbjct: 173 FMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQK 232

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
               +  +       PNVVTYN +I+  CK GR DE   +   M     + +  +Y   I
Sbjct: 233 GLGCFGEM-ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
           +GLC+ G+++ A  +  EM   G   D VTYN +++G+C+ G   +   +   M R G  
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV+Y  LI  + +   ++ A+  ++ +R +    +  T+  LI+G  + G LN+A +I
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411

Query: 368 LNEVEEGGEG-----------------RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LNE+ E G                   R+ +A  +V  M + G   +  + +++++GF +
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +L+ A  + +EM  KG SP  V+Y++LI GLC++ R  EA    +EML+ G  PD  T
Sbjct: 472 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 531

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LIN  C    ++ AL L  + + KGF PD   Y++LI+GL    +  +A +L   + 
Sbjct: 532 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 591

Query: 531 KRNCVPNLVTYNTLMDGL----FKT------GDCDKAL-----EIWNHILEERLRPDIIS 575
               VP+ VTY+TL++      FK+      G C K L      ++  ++E   +P    
Sbjct: 592 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 651

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           YN+ + G C    +  AF    + +  G +P T+T   L++A+   G
Sbjct: 652 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 227/471 (48%), Gaps = 35/471 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + ++A   L S+  KG++P++ SY  +INGL + G +  A  + +EM  +G   + 
Sbjct: 260 CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN L++G+ K+G++ +A  I   +V    V P+VVTY  +IN +CK    +  +E +D
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  TY + I G  + G +  A R+  EM ESG     VTYNA I G C   
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +++E   + + M  KG   +VVSY+ +I G    G++D A  + + + EK  + D+ T+ 
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI GLC+                    RL +A  L   M   G   + +T  +L+N + 
Sbjct: 499 SLIQGLCE------------------MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L  A+ L  EM  KG  P  V+Y+ LINGL K  R  EA   + +++ +   P  +
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 600

Query: 470 TYSL---------------LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           TY                 LI G C    +  A ++    +++   P   +YN++IHG C
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
             G +  A  LY  M     VP+ VT  TL+  LFK G  ++  E+    L
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 711



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 248/536 (46%), Gaps = 49/536 (9%)

Query: 65  EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
           E+++  C  +V    ++I AY K    D+A  + + M+   G +  +         LCR+
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCRE 297

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              ++A   L  +  KG  PD  +Y T++NG  K G+   AL +  EM   GV  +VV Y
Sbjct: 298 GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 357

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI+   K  +  RA E ++++ +   + PN  TY  +I+G  + G  +E   + + M 
Sbjct: 358 TALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           ++       TY +FIHG C    +E A  V +EMVE G+  D V+Y+ +I GFCR G++ 
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476

Query: 294 ECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             F++ + M  KG   + V+Y+ LI+GL E  ++ EA  + + + +     D  T+  LI
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           N  C  G LNKA+ + +E+    +G L DA                 T + L+NG  + +
Sbjct: 537 NAYCVEGDLNKALHLHDEMIH--KGFLPDAV----------------TYSVLINGLNKQA 578

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNT---------------LINGLCKVERFGEAYSFVK 457
           +   A  L  ++  +   P+ V+Y+T               LI G C      EA    +
Sbjct: 579 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFE 638

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+E+  KP    Y+++I+G C+   +  A  L  + +  GF P       LI  L   G
Sbjct: 639 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698

Query: 518 KVEDALQLYSNMKKRNCVPNLVTY-NTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
             E+  ++  +   R+C  N       L++   K G+ +  L +   + ++ L P+
Sbjct: 699 MNEEMSEVIGD-TLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 167/385 (43%), Gaps = 49/385 (12%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLV-----VHVSRILELIE------ 65
           N  T   L D  +R+     +  + + +      P +V     +H   +LE +E      
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447

Query: 66  ---IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
              ++K   P+ V+ S +I  + +    D+A  + Q M E         +      LC  
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+  +A      + + GL PD ++Y T+IN     GDL  AL + DEM  +G   + V Y
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           ++LI+G  K+     AK +  +L+ E SV P+ VTY+ +I   C    F   +       
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIEN-CSNIEFKSVV------- 618

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                       + I G C  G +  A+RV+  MVE         YN +I G CR G + 
Sbjct: 619 ------------ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLP 666

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS--IWELLREKNCNADSTTHGV 350
           + F L++ M   G + + V+   LI+ L + G ++E +S  I + LR    N ++    V
Sbjct: 667 KAFNLYKEMIHSGFVPHTVTVITLIKALFKEG-MNEEMSEVIGDTLRSCRLN-EAELAKV 724

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG 375
           L+    K G +   + +L ++ + G
Sbjct: 725 LVEINHKEGNMEAVLNVLTDMAKDG 749



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC-SAGKVE-DALQLYSN 528
           + L++        ID A+         GF P V  YN ++  +  S G V+  A ++Y  
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    PN+ TYN L+ G    G+  K L  +  +      P++++YN  +   C   R
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +AF  L     +G+ P  I++++++  +   G+
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 304/637 (47%), Gaps = 56/637 (8%)

Query: 11  LLKAEKNPHTALALFDSATRE-PGYAHSPHLFH---HIL---RRLIDPKLVV-------H 56
           L K  +N        DS T   P + HS   F    HIL   RRL D + V+        
Sbjct: 208 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG 267

Query: 57  VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           VSR+ E++E            S++  YG         D+  R             + R+ 
Sbjct: 268 VSRV-EIVE------------SLVLTYGNCGSNPLVFDLLVR----------TYVQARKL 304

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +       L  KGL   + +  +++ GLVK G +  A  ++ E+   GV+ NV   NI+
Sbjct: 305 REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIM 364

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+   K       K     +  E  V+P+VVTYN +IN  C+ G  +E  E+ D M    
Sbjct: 365 INALCKNQKIENTKSFLSDM-EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            +   FTY + I+GLCK G    A+ V  EM++ G+  D  TYN ++   CR   + +  
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            +++ M  +G + ++VS++ LI  L +NG +D+A+  +  ++      D+  + +LI G 
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
           C+NG +++A+++ +E+ E G                 E  L++A  L   M + G   + 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           YT  +L+NG+ +   +  A+ LF+ M ++   P VV+YNTLI+G CK     +      +
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+ +   P+ I+Y +LING C    +  A +L  + ++KGF   +   N ++ G C AG 
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
              A +  SNM  +  VP+ +TYNTL++G  K  + D+A  + N +    L PD+I+YN+
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            L G     RM +A   +   + RG+ P   T+  L+
Sbjct: 784 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 239/463 (51%), Gaps = 20/463 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+   E+A   ++S+  KGLKP V++Y  +INGL K+G  L A  V DEM + G+  + 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+    +  + M A+ I++ +  +  V P++V+++ +I  L K G  D+ L+ + 
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK      D+  Y   I G C+ G +  A +V  EM+E G  +D VTYN +++G C+  
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E  EL+  M  +G   +  ++  LI G  ++G +++A++++E++ ++N   D  T+ 
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK   + K  ++ N+                  M       N  +   L+NG+ 
Sbjct: 643 TLIDGFCKGSEMEKVNELWND------------------MISRRIYPNHISYGILINGYC 684

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  L+ EM  KG   T+++ NT++ G C+     +A  F+  ML KG  PD I
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING  + + +D A  L  +    G  PDV  YN++++G    G++++A  +   M
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            +R   P+  TY +L++G     +  +A  + + +L+    PD
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 273/548 (49%), Gaps = 43/548 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEK--GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG--- 165
           CR+   +  +RF++S+       K  + S+  +I+ LV+S  L  A AV   M  +    
Sbjct: 211 CRE-NLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS 269

Query: 166 ----VETNVVCY-----NILIDGFFKKGDYMRAKEIWE-----RLVMETSVYPNVVTYNV 211
               VE+ V+ Y     N L+     +  Y++A+++ E     R++    +  ++   N 
Sbjct: 270 RVEIVESLVLTYGNCGSNPLVFDLLVR-TYVQARKLREGCEAFRVLKSKGLCVSINACNS 328

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ GL K G  D   E++  + ++  + + +T    I+ LCK   +E  +    +M E G
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-VVSYNILIRGLLENGKVDEAI 330
           +F D VTYN +I+ +CR G ++E FEL + M  KG    V +YN +I GL + GK   A 
Sbjct: 389 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV-EEGGEGRLADAASLVNRM 389
            + + + +   + D+ T+ +L+   C+N  +  A +I +E+  +G    L   ++L+  +
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 390 DKHGCKLNA------------------YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
            K+GC   A                  YT   L+ GF +   +  A+ +  EM  +GC  
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTI--LIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VV+YNT++NGLCK +   EA     EM E+G  PD  T++ LING  +   ++ A+ L 
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              +Q+   PDV  YN LI G C   ++E   +L+++M  R   PN ++Y  L++G    
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   +A  +W+ ++E+     II+ N  +KG C       A EFL++ L +GI+P  IT+
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 746

Query: 612 HILVRAVM 619
           + L+   +
Sbjct: 747 NTLINGFI 754


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/520 (31%), Positives = 270/520 (51%), Gaps = 28/520 (5%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E+A   L  +   GL PDV +   V+NGL K+  +  A+ +F EM   G E  +V YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G         A + +  ++ +    P+V+ +  +I+G CK G+      + ++  K  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMI-DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
           R  D F Y S IHG CKAG+++   ++  EM+ +G   DA  Y  +ID  C+ G++ E +
Sbjct: 121 R-PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL+E M + GCL + V++  LI  L  +GK+DEA  ++  + E+           LI  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 356 CKNGYLNKAIQILNEV--EEGGEGRLA-----DAASLVNRMDKHGCKL-----------N 397
           CK G +++A +I   V  ++    R+A     D    + R+D  G KL           +
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD-DGLKLLLQMVECDNFPD 298

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N L+ GF +A++L++A+ LFK +S  GC P   +Y T+I GL   +R  EA +F  
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           E L      D+I+Y+ +I GL  SK+ID A +L  +    G +P+V  Y  +I GL  AG
Sbjct: 359 EAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++ED L+ + +M   +CVP   TY  ++DGL K      A +++  ++++   PD I+Y 
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             + G    S+M +A + L+  L +G  PT +T+  +V  
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/587 (25%), Positives = 269/587 (45%), Gaps = 80/587 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+ +KA      +   G +P + SY TVI+GL     +  A   F+ M + G E +
Sbjct: 30  LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPD 89

Query: 170 VVCYNILIDGFFKKGD----YMRAKEIWERLVMETSVY---------------------- 203
           V+ +  LI GF K G     +M   +  +R   +  +Y                      
Sbjct: 90  VIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEE 149

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI-----HG- 250
                  P+   Y V+I+ LCK GR DE  E+++RM+K+    D  T+ + I     HG 
Sbjct: 150 MLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209

Query: 251 -----------------------------LCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                        LCKAG V+ A  +Y+ +V   +    V YN+
Sbjct: 210 LDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNS 269

Query: 282 MIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG+C+ G++ +  +L   M       ++ +YNIL+ G     ++D+A+ +++LL    
Sbjct: 270 LMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYG 329

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-----------GGEGRLADAASLVNRM 389
           C  ++ T+  +I GL     + +A    +E  +               R+ +A  L  ++
Sbjct: 330 CKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKL 389

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC  N     ++++G ++A ++E+ +  F++MS   C PT  +Y  +I+GLCK +  
Sbjct: 390 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQML 449

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A    ++M++KG  PD ITY+ LI+G  ++ K+D A KL    L KG  P    Y  +
Sbjct: 450 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 509

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +HG C    + +A ++ + M++R C P L  + +L+      G  ++A ++   +     
Sbjct: 510 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 569

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            PD+I Y   +  L S  R+ +A    +  + +G  P  +T+  +++
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 158/637 (24%), Positives = 286/637 (44%), Gaps = 92/637 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           +VI         D+A   F  M +  GCE  ++         C+  Q +     LN   +
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK 118

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +  +PDV+ Y +VI+G  K+GDL     + +EM   G   +   Y +LID   K G    
Sbjct: 119 R-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 189 AKEIWERL----------------------------------VMETSVYPNVVTYNVMIN 214
           A E++ER+                                  ++E    P +   + +I 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            LCK G+ DE  E++  +   +       Y S + G CK G V+   ++  +MVE   F 
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC--------------------------- 307
           D  TYN ++ GF RA ++ +  EL++++   GC                           
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 308 ---LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
              L+V+SY  +I+GL ++ ++DEA  ++E L+   C+ +   +  +I+GL K G +   
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDG 417

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           ++   ++                        L DA  +  +M + GC  +  T  +L++G
Sbjct: 418 LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 477

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +ASK++ A  L   M  KG  PT V+Y ++++G CK++   EA   + +M E+G +P 
Sbjct: 478 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 537

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +  ++ L++      + + A ++  +   +G  PDV +Y  LI  L S G+V +A  ++ 
Sbjct: 538 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 597

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           +M ++ C P+ +TY T++    K G+ + A EI   + +  + PD  +YN  + G     
Sbjct: 598 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 657

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           R+  AF   +  +  GI P  +T+++L+  +  +G +
Sbjct: 658 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 694



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 252/514 (49%), Gaps = 27/514 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + +   + L  + E    PD+ +Y  ++ G  ++  L  AL +F  +   G + N 
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  +I G +       AK  ++  +       +V++Y  +I GL    R DE  E+++
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEAL-------DVISYTTVIKGLADSKRIDEACELFE 387

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++K      +   Y + I GL KAG +E   + + +M  S       TY  +IDG C+A 
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ 447

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + +  +++E M +KGC+ + ++Y  LI G  +  K+DEA  + +++  K     + T+G
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +++G CK       + ++NE +E           ++ +M + GC+   +   SL++ ++
Sbjct: 508 SIVHGFCK-------LDMINEAKE-----------VIAQMRERGCEPGLFIFTSLLSYYL 549

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              + E A  +  EM+ +GC+P V+ Y +LI+ L    R  EA      M+EKG  PD +
Sbjct: 550 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 609

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY  +I    +   ++ A ++     + G  PD   YN L+ G     +V+ A  +Y  M
Sbjct: 610 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 669

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE-ERLRPDIISYNITLKGLCSCSR 588
                 PN VT+N LM GLFK G  D+A  ++  +LE + + P ++SY I + GL    R
Sbjct: 670 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGR 729

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +S+AF    + + RGI+P   T+  L+ ++   G
Sbjct: 730 VSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 286/626 (45%), Gaps = 49/626 (7%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELI---------EIQKCYCPEDVALS------VIQAY 83
            L+  ++ R  +P L V  S I  L          EI +    + VA S      ++  Y
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274

Query: 84  GKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
            K    D  L +  +M E         +        R  + + A      L   G KP+ 
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+I GL  +  +  A A FDE        +V+ Y  +I G         A E++E+
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEK 388

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           L       PNVV Y  +I+GL K GR ++ L+ ++ M  +       TY   I GLCKA 
Sbjct: 389 L-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ 447

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            +  A +V+ +MV+ G   D +TY  +IDGF +A K+ E  +L +VM  KG     V+Y 
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ G  +   ++EA  +   +RE+ C         L++     G   +A Q+L E+   
Sbjct: 508 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR+ +A  + + M + GC  +A T  +++  F +   +E A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             + + M++ G  P   +YN+L++G  K+ER  +A+     M+  G KP+ +T+++L++G
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 478 LCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           L +  K D A  L  + L+K    P +  Y ILI GL  AG+V +A   +  M  R  +P
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
              TY +L+  L K G   +A ++   +++  + PD+ +Y+  + GL   S +  A++  
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
            + + RG  P  +T+ +L R     G
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 20/357 (5%)

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           +EM  +G+  D V  N +++G C+A KI +  EL+  M   GC   +VSYN +I GL   
Sbjct: 9   KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            K+DEA   +  + +  C  D      LI+G CK G       +LN+             
Sbjct: 69  DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA------------ 116

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
             + R      + + +   S+++G+ +A  L+    + +EM   GC P   +Y  LI+ L
Sbjct: 117 --LKRF-----RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPL 169

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+ R  EAY   + M + G   D +T+  LI  L    K+D A +L  + +++G+ P +
Sbjct: 170 CKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYL 229

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            + + LI  LC AGKV++A ++Y  +  +    + V YN+LMDG  K G  D  L++   
Sbjct: 230 EVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQ 289

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++E    PDI +YNI + G    +R+ DA E        G  P   T+  +++ + +
Sbjct: 290 MVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD 346



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 131/244 (53%), Gaps = 1/244 (0%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A   +  M   G   +   CN ++NG  +A K++ AI LF EM   GC PT+VSYNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+GL  +++  EAY F   M++ G +PD+I ++ LI+G C++ +  +   L  Q L++ 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F PDV +Y  +IHG C AG ++   ++   M    C+P+   Y  L+D L K G  D+A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E++  + +     D +++   ++ L +  ++ +A E   + + RG  P       L+ A+
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 619 MNNG 622
              G
Sbjct: 240 CKAG 243



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E A   L  + + G+ PD ++Y ++++G VK   +  A  V+D M   G++ N V +N+L
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           + G FK G   RA  +++ ++ +  V P +V+Y ++I+GL K GR  E    +  M    
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              +  TY S I+ L KAG +  A+++  +MV+ G+  D   Y+A+I G   +  +   +
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           ++++ M ++GC  N V+Y +L RG    G+
Sbjct: 805 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 14/285 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI    L++LL +      A  +FDS   E G A     +  I++       V     IL
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMI-EKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 631

Query: 62  ELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCR 112
           EL+  +    P+  A  S++  Y K    D+A  V+ RM       N + F      L +
Sbjct: 632 ELMA-KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 113 KRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
             + ++A      + EK  + P + SY  +I+GL K+G +  A + F EM +RG+     
Sbjct: 691 DGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI    K G    AK++ E +V +  V P+V  Y+ +I GL      D   +++  
Sbjct: 751 TYTSLIYSLAKAGRIPEAKKLVEDMV-KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 809

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           M K     +  TY     G   AG     E V ++    G+ ++A
Sbjct: 810 MMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQGVAMEA 853


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 292/586 (49%), Gaps = 31/586 (5%)

Query: 59  RILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM------NEIFGCEAGI-- 109
           ++L  ++ +    P++ A  V I  Y +    D A+ +   M        +F C + I  
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ +  +A+  +  + +  LKPD YSY T+++G  + G    A  + D+M + G+E  
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN L+ G  + G +  A +IW  L+M+  V P+ V Y+ +++GL K   F+    +W
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWH-LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +      K   T+ + I GLCK G +  AE ++ +M + G   D +TY  +IDG+C+A
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + + F++   M R+    ++  YN LI GL ++ ++ E   +   +  +    +  T+
Sbjct: 556 SNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTY 615

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
           G LI+G CK G L+KA     E+ E G                  GR+ +A  L+ +M  
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG     + C   +   I+ + ++       E  +    P  + YN  I GLCK  +  +
Sbjct: 676 HGF-FPDHEC--FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  F   +  KG+ PD  TY  LI+G   +  +D A +L  + L++G  P++  YN LI+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC +  V+ A +L+  + ++   PN+VTYNTL+DG  K G+ D A ++ + ++EE + P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +++Y+  + GLC    +  + + LN  +  G+    I +  LV+ 
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 293/563 (52%), Gaps = 52/563 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           C++ + ++A++ L  + E+  L PD  +YG +I+G  ++G +  A+ + DEM   G++TN
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +   N LI+G+ K+G+   A+ +  R+V + ++ P+  +YN +++G C+ G   E   + 
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+M +   E    TY + + GLC+ G  + A +++  M++ G+  D V Y+ ++DG  + 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +    LW +++ R    + +++N +I GL + GK+ EA  I++ +++  C+ D  T+
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 349 GVLINGLCKNGYLNKA---------------IQILNEVEEG--GEGRLADAASLVNRMDK 391
             LI+G CK   + +A               I++ N +  G     RL +   L+  M  
Sbjct: 546 RTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI 605

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  T  +L++G+ +   L+ A   + EM+  G S  ++  +T+++GL ++ R  E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 452 AYSFVKEMLEKGWKPDM--------------------------------ITYSLLINGLC 479
           A   +++M++ G+ PD                                 I Y++ I GLC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ K+D A +       KGF PD   Y  LIHG  +AG V++A +L   M +R  VPN+V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYN L++GL K+ + D+A  +++ + ++ L P++++YN  + G C    M  AF+  +  
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           +  GI P+ +T+  L+  +  +G
Sbjct: 846 IEEGISPSVVTYSALINGLCKHG 868



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/641 (27%), Positives = 298/641 (46%), Gaps = 67/641 (10%)

Query: 19  HTALALFDSATREPGYAHSP-HLFHHILRRLID---PKLVVHVSRILELIEIQKCYC--- 71
           H   ++F        +   P HL   +L +L D   P     VSRI  L+ +++C     
Sbjct: 2   HRYFSIFTPPLPSRLHLRRPIHLSRTLLWKLRDESHPAPPELVSRICRLVLLRRCNAISK 61

Query: 72  -----PEDVALSVIQAYGKNSMPDKALDVFQ--------RMNEIFGCE-AGILCRKRQFE 117
                 +D+  +V++    N  P  +L  FQ        R N    C+   IL R R ++
Sbjct: 62  LNFVFSDDIVDAVLRNLRLN--PTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYD 119

Query: 118 KAKRFLNSL-------------WEK--------GLKPDVYSYGTVINGLVKSGDLLGALA 156
           + + +LN L             W++           P V+    ++   V+ G    AL 
Sbjct: 120 ETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD--MILKVYVEKGLTKNALY 177

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           VFD M + G   ++   N L++   K G+   A  ++++++    + P+V   ++M+N  
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI-RVGIVPDVFMVSIMVNAF 236

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G+ DE      +M+    E +  TY S I+G    G+VE A+ V + M E G+  + 
Sbjct: 237 CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNV 296

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWE 334
           VTY  +I G+C+  K+ E  ++   M  +  L  +  +Y +LI G    GK+D+A+ + +
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +       +      LING CK G          E+ E        A  ++ RM     
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRG----------EIHE--------AEGVITRMVDWNL 398

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K ++Y+ N+L++G+ +      A  L  +M ++G  PTV++YNTL+ GLC+V  F +A  
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M++ G  PD + YS L++GL + +  + A  L    L +GFT     +N +I GLC
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GK+ +A +++  MK   C P+ +TY TL+DG  K  +  +A ++   +  E + P I 
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIE 578

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            YN  + GL    R+ +  + L +   RG+ P  +T+  L+
Sbjct: 579 MYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 207/497 (41%), Gaps = 92/497 (18%)

Query: 91   KALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            +A ++F +M ++     GI         C+     +A +   ++  + + P +  Y ++I
Sbjct: 525  EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584

Query: 143  NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            +GL KS  L+    +  EM  RG+  N+V Y  LIDG+ K+G   +A   +  +  E  +
Sbjct: 585  SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT-ENGL 643

Query: 203  YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN-------------------EREKDSF- 242
              N++  + M++GL + GR DE   +  +M  +                   ++  DS  
Sbjct: 644  SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 243  ------------TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
                         Y   I GLCK G V+ A R +  +   G   D  TY  +I G+  AG
Sbjct: 704  ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 291  KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
             + E F L + M R+G + N+V+YN LI GL ++  VD A  ++  L +K    +  T+ 
Sbjct: 764  NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             LI+G CK G ++ A +                  L ++M + G   +  T ++L+NG  
Sbjct: 824  TLIDGYCKIGNMDAAFK------------------LKDKMIEEGISPSVVTYSALINGLC 865

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS----------FVKEM 459
            +   +E ++ L  +M + G    ++ Y TL+ G  K   + E             F+   
Sbjct: 866  KHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCFLLPK 925

Query: 460  LEKGWK---------------PDMITYSLLIN---GLCQSKKIDMALKL----CCQFLQK 497
             +  WK               P    +  LIN    +  SK ID A  L    CCQF  +
Sbjct: 926  FKHSWKFVGVVALDCPIRIFGPKGTIWFNLINESWHVKDSKIIDXAPDLGILSCCQFQME 985

Query: 498  GFTPDVTMYNILIHGLC 514
               P   +  + +   C
Sbjct: 986  XAEPTKEIQELFLRRYC 1002



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 134/259 (51%), Gaps = 3/259 (1%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            +LN + + GE   A    +  +M + G   + +  + ++N F +  K++ A    K+M 
Sbjct: 196 SLLNNLVKNGETHTAHY--VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME 253

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P +V+Y++LING   +     A   +K M EKG   +++TY+LLI G C+  K+D
Sbjct: 254 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 486 MALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A K+     ++    PD   Y +LI G C  GK++DA++L   M +     NL   N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++G  K G+  +A  +   +++  L+PD  SYN  L G C     S+AF   +  L  GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 605 LPTTITWHILVRAVMNNGA 623
            PT +T++ L++ +   GA
Sbjct: 434 EPTVLTYNTLLKGLCRVGA 452


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 270/497 (54%), Gaps = 33/497 (6%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G++PD+Y+   +I+       +     VF    +RG E + V    L+ G + +     A
Sbjct: 976  GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++++ +  +  +  +  TY ++INGLCK  +    +++ ++MK N +  D FTY   I 
Sbjct: 1036 VQLFDEMT-KKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCK-GDVFTYGMIID 1093

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCL 308
             LCK G    A  ++ EM+ +GI  D V Y++++DG CR G++KE  E ++ M GR    
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            +V +YN LI GL   G   E      L+ ++  + D+ T  +LI+GLCK           
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK----------- 1202

Query: 369  NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   EG++ +A  ++  M   G + +  T N+LMNG     +LE+A  LF+ ++ +G
Sbjct: 1203 -------EGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
                V SYN LING CK ++  EA+ F +EM  KG KP  +TY+ LI  LCQS ++  A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 489  KL------CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            KL      C QFL+      ++ Y +L+ GLC  G +E+A+ L+ ++KK    PN+  ++
Sbjct: 1316 KLFVEMQTCGQFLK------LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369

Query: 543  TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
             L+DG+ + G  ++A + ++ I +  L PD I+YNI + GLC+   +S+A + L     +
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429

Query: 603  GILPTTITWHILVRAVM 619
            G LP +IT++++++ ++
Sbjct: 1430 GCLPDSITFNVIIQNLL 1446



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 238/481 (49%), Gaps = 56/481 (11%)

Query: 128  EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            ++G +PD  +  T++ G+     +  A+ +FDEM ++G+  +   Y ILI+G  K     
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068

Query: 188  RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
             A ++ E+  M+ +   +V TY ++I+ LCK G   E L+M+  M       D   Y S 
Sbjct: 1069 LAIKLHEK--MKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 248  IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
            + GLC+ G ++ A   ++EM   GI  D  TYN++I G  RAG  KE      +M  +G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 307  CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
              +  ++ ILI GL + GKV EA  I EL+R K    D  T+  L+NGLC          
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL--------- 1237

Query: 367  ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      G+L DA  L   +   G KLN ++ N L+NG+ +  K++ A   F+EM  
Sbjct: 1238 ---------VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRP 1288

Query: 427  KGCSPTVVSYNTLI-----------------------------------NGLCKVERFGE 451
            KG  P+ V+YNTLI                                   +GLCK     E
Sbjct: 1289 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 1348

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            A    + + +   KP++  +S+L++G+C++ K++ A K   +  + G  PD   YNILI+
Sbjct: 1349 AMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            GLC+ G + +A++L   M+++ C+P+ +T+N ++  L K  +  +A+++   +      P
Sbjct: 1409 GLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468

Query: 572  D 572
            D
Sbjct: 1469 D 1469



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 253/492 (51%), Gaps = 34/492 (6%)

Query: 66   IQKCYCPEDVALSVI--QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQ 115
            +++ + P+ V ++ +    + +N +PD A+ +F  M +         +G     LC+ R+
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066

Query: 116  FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
               A + L+   +   K DV++YG +I+ L K G    AL +F EM   G+  +VV Y+ 
Sbjct: 1067 TGLAIK-LHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125

Query: 176  LIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            L+DG  + G    A E ++   ME   +  +V TYN +I+GL + G + E     + M  
Sbjct: 1126 LMDGLCRFGRLKEALEFFKE--MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 235  NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                 D+FT+   I GLCK G V  A+++   M   G   D +TYN +++G C  G++++
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243

Query: 295  CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              +L+E +  +G  LNV SYNILI G  ++ K+DEA   +E +R K     + T+  LI 
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303

Query: 354  GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
             LC++G +  A ++  E++  G+                  KL+ Y    L++G  +   
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQF----------------LKLSTYCV--LLDGLCKNGH 1345

Query: 414  LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            LE A+ LF+ + +    P +  ++ L++G+C+  +  EA+    E+ + G +PD I Y++
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            LINGLC    +  A+KL  Q  +KG  PD   +N++I  L    ++ +A+QL   M+ RN
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465

Query: 534  CVPNLVTYNTLM 545
              P+    + L+
Sbjct: 1466 FSPDEAVTSMLL 1477



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 243/498 (48%), Gaps = 25/498 (5%)

Query: 144  GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            G++K  D   A+ +FD             +N L+    K G Y     ++ R + +  + 
Sbjct: 923  GIIKLND---AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMY-RKINDVGIQ 978

Query: 204  PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
            P++ T N++I+  C          ++    K   E D+ T  + + G+     +  A ++
Sbjct: 979  PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038

Query: 264  YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
            + EM + G+  DA TY  +I+G C+A K     +L E M      +V +Y ++I  L ++
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKD 1098

Query: 324  GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            G   EA+ ++  +       D   +  L++GLC+ G L +A++   E+E  G G  AD  
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME--GRGISADVY 1156

Query: 384  S-------------------LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
            +                    +N M   G   +A+T   L++G  +  K+  A  + + M
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216

Query: 425  SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              KG  P +++YNTL+NGLC V +  +A    + + ++G K ++ +Y++LING C+ +KI
Sbjct: 1217 RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276

Query: 485  DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            D A +   +   KG  P    YN LI  LC +G+V  A +L+  M+       L TY  L
Sbjct: 1277 DEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336

Query: 545  MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
            +DGL K G  ++A++++  I +   +P+I  ++I L G+C   ++ +A++  ++    G+
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396

Query: 605  LPTTITWHILVRAVMNNG 622
             P TI ++IL+  + N G
Sbjct: 1397 EPDTIAYNILINGLCNKG 1414


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/525 (31%), Positives = 270/525 (51%), Gaps = 36/525 (6%)

Query: 112 RKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           R  + + A +F +   E+ G K DV+SY  +++ LVKSG       V+ ++   G   N+
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V + ILI G  K G   RA E   R + E SV P+V  +N +I+GL K G  D+ +++++
Sbjct: 63  VTFKILIRGNCKAGQATRALEFL-RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG--IFVDAVTYNAMID-GFC 287
            M+ +    D FTY + I GLCK+GN+E A  +  EM+  G     D VTYN +I+ G C
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181

Query: 288 RAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G ++E  E+ + M   G   +V++YN +I  L   G+V EA    E+L+  +C+ D  
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA---AEILKTMSCSPDLV 238

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T   L++G CK G L +A+++L E                  M +     +  T   L+N
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEE------------------MCRENILPDVITYTILVN 280

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK---- 462
           G  +  +++ A +L +E+ R+G  P V++Y +L++GLCK     EA+  VKEM  +    
Sbjct: 281 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILA 340

Query: 463 -----GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
                   P + TY++++ GL +   I  A+ L    + +G+ PDV  YN LI GLC A 
Sbjct: 341 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +V +A  L   M    C PN VT  +++ GL + G  D A  +   +  +R  P+++ Y 
Sbjct: 401 RVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 460

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + GLC   RM DA   L+    +G+      +  L+ ++++ G
Sbjct: 461 SLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGG 505



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 172/589 (29%), Positives = 283/589 (48%), Gaps = 46/589 (7%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           ++    P  A+  FD A  + GY H  H ++H+L  L+         ++ + +    C  
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGC-S 59

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           P  V   ++                 R N    C+AG      Q  +A  FL +L E  +
Sbjct: 60  PNLVTFKILI----------------RGN----CKAG------QATRALEFLRALDEFSV 93

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PDVY +  +I+GL K G+   A+ +F+ M    V  ++  YN +I G  K G+  +A+E
Sbjct: 94  APDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARE 153

Query: 192 IWERLVMETS-VYPNVVTYNVMIN-GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           + E ++       P++VTYN +IN G+CK G  +E LE+ D MK      D  TY S IH
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LC AG V  A  + + M  S    D VT+N ++DGFC+AG +    E+ E M R+  L 
Sbjct: 214 ALCVAGRVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 270

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V++Y IL+ GL   G+V  A  + E +  +    D   +  L++GLCK+G + +A +++
Sbjct: 271 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 330

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+          A  ++  M         +T N ++ G I+   +  A+ L  ++  +G
Sbjct: 331 KEMS---------AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 381

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+YNTLI+GLCK  R  EA     EM   G  P+ +T   ++ GLC+  ++D A 
Sbjct: 382 YVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAW 441

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  +  +K   P+V +Y  LI GLC + +++DA  +   M+ +    +   Y  L+  +
Sbjct: 442 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSM 501

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
              G   +A+ +++ ++     PD      T K L   +  +  FE+ N
Sbjct: 502 IHGGRVAEAMAMYDEMVARGFLPD----GSTSKTLEEAAMSNSVFEWTN 546


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 269/555 (48%), Gaps = 30/555 (5%)

Query: 72  PEDVAL--SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKR 121
           P DV    + ++A+ K    D A  VF+ M       NE+ +      LCR    E+A  
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F   + + GL PD ++YG ++NGL K G L  A A+ DEM   G++ NVV Y  L+DGF 
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+G    A +I   ++    V PN + Y+ +I GLCK G+     ++ + M K     D+
Sbjct: 362 KEGKAAEAFDILNEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           FTY   + G  +  + +GA  +  EM  SGI  +A TY  MI+G C+ G+ KE   L E 
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  +G   N   Y  LI G  + G +  A    E + + N   D   +  LI GL     
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST--- 537

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           GR+ +A     ++ K G   + +T + L++G+ +   LE A  L
Sbjct: 538 ---------------VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            ++M   G  P   +Y  L+ G  K     +  S ++ ML  G KPD   Y ++I  L +
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           S+ +++A  +  +  + G  PD+ +Y+ LI GLC    +E A+ L   M K    P +V 
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN L+DG  ++GD  +A  +++ IL + L P+ ++Y   + G C    ++DAF+   D L
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762

Query: 601 CRGILPTTITWHILV 615
            RGI P    +++L 
Sbjct: 763 DRGIAPDAFVYNVLA 777



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 240/509 (47%), Gaps = 35/509 (6%)

Query: 91  KALDVFQRMNEIFGCEAGI-------------LCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           KA + F  +NE+    AG+             LC+  Q  +A + LN + + G +PD ++
Sbjct: 365 KAAEAFDILNEMI--SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  ++ G  +  D  GA  + +EM   G+  N   Y I+I+G  + G+   A  + E ++
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            E  + PN   Y  +I G  K G      E  + M K     D F Y S I GL   G +
Sbjct: 483 SE-GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
           E AE  Y ++ + G+  D  TY+ +I G+C+   +++  +L + M   G   N  +Y  L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           + G  ++   ++  SI + +       D+  +G++I  L ++  +  A  +L EVE+ G 
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661

Query: 376 -----------EG--RLAD---AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                       G  ++AD   A  L++ M K G +      N+L++GF ++  +  A  
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 721

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F  +  KG  P  V+Y  LI+G CK     +A+   K+ML++G  PD   Y++L  G  
Sbjct: 722 VFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS 781

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            +  ++ AL L  +   +G+   V++++ L+ G C  G++++  +L   M  R  VPN  
Sbjct: 782 DAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQ 840

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEER 568
           T   ++    K G   +A  ++  + +++
Sbjct: 841 TVENVITEFGKAGKLCEAHRVFAELQQKK 869



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 172/352 (48%), Gaps = 19/352 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M  +GI  D  TY+  ++  C+A       +++E M R+ C +N V+YN++I GL  +G 
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           V+EA    E + +   + D+ T+G L+NGLCK G                  RL +A +L
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGG------------------RLKEAKAL 337

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           ++ M   G K N     +L++GF++  K   A  +  EM   G  P  + Y+ LI GLCK
Sbjct: 338 LDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK 397

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           + + G A   + EM++ G +PD  TY  L+ G  Q    D A +L  +    G  P+   
Sbjct: 398 IGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y I+I+GLC  G+ ++A  L   M      PN   Y  L+ G  K G    A E   ++ 
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +  + PD+  YN  +KGL +  R+ +A E+      RG++P   T+  L+  
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHG 569



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 145/292 (49%), Gaps = 17/292 (5%)

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG--------EGRL-----ADAASLVNR----MDKH 392
           VL++   KNG +  A Q++  + + G         G L     ADA  LV +    M+  
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   + YT ++ +    +A   + A  +F+EM R+ C+   V+YN +I+GLC+     EA
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           + F +EM++ G  PD  TY  L+NGLC+  ++  A  L  +    G  P+V +Y  L+ G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
               GK  +A  + + M      PN + Y+ L+ GL K G   +A ++ N +++   RPD
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             +Y+  ++G         AFE LN+    GILP   T+ I++  +  NG S
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 45/223 (20%)

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC--------- 111
           L E++K     D+ +  S+I    K +  +KA+ +   M +  G E GI+C         
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE-GLEPGIVCYNALIDGFC 711

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R     +A+   +S+  KGL P+  +Y  +I+G  K+GD+  A  ++ +M +RG+  +  
Sbjct: 712 RSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771

Query: 172 CYNILIDGFFKKGDYMRA----KEIWER-----------------------------LVM 198
            YN+L  G     D  +A    +E++ R                             ++M
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMM 831

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           +  + PN  T   +I    K G+  E   ++  +++ +  + S
Sbjct: 832 DREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSS 874


>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
          Length = 238

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 126/234 (53%), Positives = 168/234 (71%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M K GCK N++  N+L+NGF +A K+ +A+ ++ EM+  GC PT+++YNTLI+GLCK E+
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           + EA S  KEMLE+G+KPD+ TY  LI GLC+ KKID AL +  + L  G   DV ++NI
Sbjct: 61  YQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNI 120

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LIHGLCSAGKV DA  +Y  MK++NC PNLVTYNTLMDG ++ G  D A  +W  IL+  
Sbjct: 121 LIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNG 180

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L+PDI++YN  +KGLCSC+R  +    LN+ L  GI+P+ ITW ILVRAV+  G
Sbjct: 181 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRYG 234



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 134/255 (52%), Gaps = 19/255 (7%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGK 325
           M++ G   ++  YNA+I+GFCRA KI +  +++ E+ G   C  +++YN LI GL +  K
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
             EA S+ + + E+    D  T+G LI GLC+   ++ A+ I NE+ + G          
Sbjct: 61  YQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAG---------- 110

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
                    +++    N L++G   A K+ +A  ++ EM  K CSP +V+YNTL++G  +
Sbjct: 111 --------IQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 162

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           +     A S    +L+ G KPD++TY+  I GLC   +    + L  + L  G  P V  
Sbjct: 163 IGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVIT 222

Query: 506 YNILIHGLCSAGKVE 520
           ++IL+  +   G ++
Sbjct: 223 WSILVRAVIRYGPIQ 237



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 2/216 (0%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M + G + N   YN LI+GF +      A +I+  +       P ++TYN +I+GLCK  
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMT-GNGCCPTIITYNTLIDGLCKAE 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           ++ E   +   M +   + D  TY S I GLC+   ++ A  ++ E++++GI VD + +N
Sbjct: 60  KYQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHN 119

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +I G C AGK+ + F ++  M  K C  N+V+YN L+ G  E G +D A S+W  + + 
Sbjct: 120 ILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDN 179

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
               D  T+   I GLC      + + +LNEV   G
Sbjct: 180 GLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 215



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 18/248 (7%)

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + +  C  +S  +  LING C+                    +++DA  +   M  +GC 
Sbjct: 1   MMKDGCKPNSHVYNALINGFCR------------------ACKISDAVKIYIEMTGNGCC 42

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
               T N+L++G  +A K + A  L KEM  +G  P + +Y +LI GLC+V++   A   
Sbjct: 43  PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCI 102

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
             E+L+ G + D+I +++LI+GLC + K++ A  +  +  +K  +P++  YN L+ G   
Sbjct: 103 WNEILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 162

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G ++ A  L++ +      P++VTYNT + GL       + + + N +L   + P +I+
Sbjct: 163 IGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVIT 222

Query: 576 YNITLKGL 583
           ++I ++ +
Sbjct: 223 WSILVRAV 230



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 19/252 (7%)

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + GC  N   YN LI G     K+ +A+ I+  +    C     T+  LI+GLCK   
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCK--- 57

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                            +  +A+SL   M + G K +  T  SL+ G  +  K++ A+ +
Sbjct: 58  ---------------AEKYQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCI 102

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           + E+   G    V+ +N LI+GLC   +  +A+    EM EK   P+++TY+ L++G  +
Sbjct: 103 WNEILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 162

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
              ID A  L    L  G  PD+  YN  I GLCS  +  + + L + +     +P+++T
Sbjct: 163 IGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVIT 222

Query: 541 YNTLMDGLFKTG 552
           ++ L+  + + G
Sbjct: 223 WSILVRAVIRYG 234



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 2/235 (0%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + + G KP+ + Y  +ING  ++  +  A+ ++ EM   G    ++ YN LIDG  K   
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           Y  A  + + + +E    P++ TY  +I GLC+  + D  L +W+ +     + D   + 
Sbjct: 61  YQEASSLTKEM-LERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHN 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             IHGLC AG V  A  +Y EM E     + VTYN ++DGF   G I     LW  +   
Sbjct: 120 ILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDN 179

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           G   ++V+YN  I+GL    +  E + +   +          T  +L+  + + G
Sbjct: 180 GLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRYG 234



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 1/184 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  ++++A      + E+G KPD+ +YG++I GL +   +  AL +++E+ + G++ +
Sbjct: 55  LCKAEKYQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVD 114

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ +NILI G    G    A  I+  +  E +  PN+VTYN +++G  + G  D    +W
Sbjct: 115 VIVHNILIHGLCSAGKVNDAFCIYLEM-KEKNCSPNLVTYNTLMDGFYEIGSIDTAASLW 173

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +  N  + D  TY + I GLC          +  E++ +GI    +T++ ++    R 
Sbjct: 174 AAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRY 233

Query: 290 GKIK 293
           G I+
Sbjct: 234 GPIQ 237



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  +   A +    +   G  P + +Y T+I+GL K+     A ++  EM ERG + +
Sbjct: 20  FCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPD 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  Y  LI G  +      A  IW   +++  +  +V+ +N++I+GLC  G+ ++   ++
Sbjct: 80  IRTYGSLIRGLCRVKKIDAALCIWNE-ILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIY 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MK+     +  TY + + G  + G+++ A  ++  ++++G+  D VTYN  I G C  
Sbjct: 139 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSC 198

Query: 290 GKIKE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
            +  E    L EV+      +V++++IL+R ++  G +
Sbjct: 199 NRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRYGPI 236


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/553 (30%), Positives = 276/553 (49%), Gaps = 22/553 (3%)

Query: 90  DKALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           D+ L V  +MN +F C + I   C+  Q  + +R L  + +  LKPD YSY T+++G  +
Sbjct: 196 DEMLKVGLKMN-LFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCR 254

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
            G    A  V D+M  +G+E  VV YN L+ G  + GDY  A  +W  L+++  V PN V
Sbjct: 255 DGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH-LMLQRGVTPNEV 313

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            Y  +++GL K G F   L +WD +      K  + + + I+GLCK G ++GA+  ++ M
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKV 326
            E G   D +TY  + DG+C+ G ++E F++ E M ++     +  YN LI GL  + K+
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKI 433

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
            + I +   +  +  + +  T+G LI G C  G L+KA     E+   G           
Sbjct: 434 SKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKI 493

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                  GR+ +A  L+ +M      L+        N  I+            E + K  
Sbjct: 494 VSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFS 553

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V YN  + GLCK  +  +A  F   +    + PD  TY  LI+G   +  ++ A  
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + + KG  P++T YN L++GLC +G ++ A +L+  +  +  +PN+VTYN L+DG  
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC 673

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K+G   +AL++   +L+E + P II+Y+  + G C  S + +A + LN+     +  T  
Sbjct: 674 KSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIA 733

Query: 610 TWHILVRAVMNNG 622
           T+  LV   + +G
Sbjct: 734 TFSKLVEGCIQHG 746



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/623 (26%), Positives = 278/623 (44%), Gaps = 93/623 (14%)

Query: 94  DVFQRMN---EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           D  +R++   ++F C   +   C+  + E+A  F+  + + G + +  SY ++++G V  
Sbjct: 55  DQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD+ GA  V   M E+GV  N V   +LI G+ K+     A+++   +  E  V  +   
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 209 YNVMINGLCKCGRFDECLEMWDRM-----------------------------------K 233
           Y  +I+G CK G+  + + + D M                                   +
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           K + + DS++YC+ + G C+ G    A  V  +M+  GI    VTYN ++ G CR G  K
Sbjct: 235 KLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +   LW +M ++G   N V Y  L+ GL + G    A+++W+ +  +  N        +I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354

Query: 353 NGLCKNGYLNKAIQILNEVEEGG---EG----RLADAASLVNRMDKHGCKLNAYTC---- 401
           NGLCK G ++ A +    +EE G   +G     L+D    V  +++              
Sbjct: 355 NGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIF 414

Query: 402 ------NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                 NSL+ G   + K+   I L  EM  +G SP VV+Y  LI G C   R  +A+S 
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL--------------CCQFLQ----- 496
             EM+ KG+ P++I  S +++ L +  +ID A  L              C +  Q     
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 497 ----------------KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
                           K   P+  +YNI + GLC +GKV DA + +  +   +  P+  T
Sbjct: 535 KLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFT 594

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y TL+ G    G  ++A  + + ++ + L P+I +YN  L GLC    +  A    +   
Sbjct: 595 YCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654

Query: 601 CRGILPTTITWHILVRAVMNNGA 623
            +G++P  +T++IL+     +G+
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGS 677



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 245/481 (50%), Gaps = 26/481 (5%)

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G+VK+     AL VFD M + G + ++   N L+    K+G+   A  +++++     + 
Sbjct: 10  GMVKN-----ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQM-RRLDIV 63

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V T  +M+N  CK G+ +  +E    M+K   E ++ +Y S + G    G++EGA+ V
Sbjct: 64  PDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGV 123

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV--VSYNILIRGLL 321
            + M E G+  + VT   +I G+C+  K++E  ++   M ++  + V   +Y  LI G  
Sbjct: 124 LKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYC 183

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + GK+ +AI + + + +     +      LING CKNG          +V EG       
Sbjct: 184 KVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNG----------QVHEG------- 226

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L+  M K   K ++Y+  +L++G+ +      A  +  +M RKG  PTVV+YNTL+ 
Sbjct: 227 -ERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLK 285

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+   + +A      ML++G  P+ + Y  L++GL +      AL L    L +G   
Sbjct: 286 GLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINK 345

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            +  +N +I+GLC  G+++ A + +  M++  C P+ +TY TL DG  K G+ ++A +I 
Sbjct: 346 SIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIK 405

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             + +E + P I  YN  + GL +  ++S   + L +   RG+ P  +T+  L+    + 
Sbjct: 406 EKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQ 465

Query: 622 G 622
           G
Sbjct: 466 G 466



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 36/279 (12%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLM------------------------------ 405
           +G + +A  + + M K+G K +  +CNSL+                              
Sbjct: 9   KGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFT 68

Query: 406 -----NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
                N + +A K+E A+   +EM + G     VSYN+L++G   +     A   +K M 
Sbjct: 69  CAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMS 128

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKV 519
           EKG   + +T +LLI G C+  K++ A K+  +  ++ G   D   Y  LI G C  GK+
Sbjct: 129 EKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKM 188

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
            DA+++   M K     NL   N+L++G  K G   +   +   + +  L+PD  SY   
Sbjct: 189 GDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTL 248

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + G C     S AF   +  L +GI PT +T++ L++ +
Sbjct: 249 VDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGL 287



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 7/219 (3%)

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV---KEMLEKGW 464
           + +   ++NA+ +F  M + G  P++ S N+L++ L K    GE+YS V    +M     
Sbjct: 6   YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKR---GESYSAVLVYDQMRRLDI 62

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD+ T ++++N  C++ K++ A++   +  + GF  +   YN L+ G  S G +E A  
Sbjct: 63  VPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKG 122

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI-LEERLRPDIISYNITLKGL 583
           +   M ++  + N VT   L+ G  K    ++A ++   +  E+ +  D  +Y   + G 
Sbjct: 123 VLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGY 182

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C   +M DA    ++ L  G+       + L+     NG
Sbjct: 183 CKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNG 221


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 184/689 (26%), Positives = 311/689 (45%), Gaps = 102/689 (14%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRL-IDPKLVVHVSRILEL 63
            K +  +++ +K+P  AL +F+S  +E G+ H+   +  I+ +L +  K       ++++
Sbjct: 7   PKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM 66

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------------- 110
            +    +  E V +  ++ YG+     +A++VF+RM + + CE  +              
Sbjct: 67  RQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSG 125

Query: 111 -------------------------------CRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
                                          CR  +   A R LN++  +G + +V +Y 
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYC 185

Query: 140 TVING-----------------------------------LVKSGDLLGALAVFDEMFER 164
           TV+ G                                   L K GD+     + D++ +R
Sbjct: 186 TVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR 245

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           GV  N+  YN  I G  +KG+   A  +  RL+ +    P+VVTYN +I GLCK  +F E
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI-DQGPKPDVVTYNYLIYGLCKNSKFQE 304

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
                 ++     E DSFTY + I G CK G V+ AER+    V +G   D  TY ++ID
Sbjct: 305 AEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLID 364

Query: 285 GFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C  G+      L+ E +G+    NV+ YN LI+GL   G + EA  +   + EK    
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T  +L+NGLCK G +                  +DA  LV  M   G   + +T N 
Sbjct: 425 EVQTFNILVNGLCKMGCV------------------SDADGLVKVMISKGYFPDIFTFNI 466

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G+    K+ENA+ +   M   G  P V +YN+L+NGLCK  ++ +     K M+EKG
Sbjct: 467 LIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG 526

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P++ T+++L+  LC+  K+D AL L  +   K   PD   +  LI G C  G ++ A 
Sbjct: 527 CAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586

Query: 524 QLYSNMKKRNCVP-NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            L+  M++   V  +  TYN ++    +  +   A +++  +++  L PD  +Y + + G
Sbjct: 587 TLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITW 611
            C    +   ++FL + +  G +P+  T 
Sbjct: 647 FCKTGNVDLGYKFLLEMMENGFIPSLTTL 675



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 227/473 (47%), Gaps = 26/473 (5%)

Query: 150 DLLGALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           D + AL +F+ M  E G +  +  Y  +I+   K G Y + + + E LV       N + 
Sbjct: 19  DPMKALEMFNSMRKEDGFKHTLSTYRSIIE---KLGLYGKFEAMEEVLVDMRQNVGNHML 75

Query: 209 YNVMINGLCKCGR---FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             V +  +   GR     E + +++RM   + E   F+Y + +  L  +G  + A +VY 
Sbjct: 76  EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYM 135

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
            M + GI  D  ++   +  FCR  +      L   M  +GC +NVV+Y  ++ G  E  
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
             DE   ++  +     +   +T   L++ LCK                  +G + +   
Sbjct: 196 FKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK------------------KGDVKECEK 237

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L++++ K G   N +T N  + G  Q  +L+ A+ +   +  +G  P VV+YN LI GLC
Sbjct: 238 LLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  +F EA  ++ +++ +G +PD  TY+ LI G C+   + +A ++    +  GF PD  
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y  LI GLC  G+   AL L++    +   PN++ YNTL+ GL   G   +A ++ + +
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E+ L P++ ++NI + GLC    +SDA   +   + +G  P   T++IL+  
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 129/249 (51%)

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
           G +G++ +A ++  RMD + C+   ++ N++M+  + +   + A  ++  M  +G +P V
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            S+   +   C+  R   A   +  M  +G + +++ Y  ++ G  +    D   +L  +
Sbjct: 147 YSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGK 206

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L  G +  ++ +N L+H LC  G V++  +L   + KR  +PNL TYN  + GL + G+
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D A+ +   ++++  +PD+++YN  + GLC  S+  +A  +L   +  G+ P + T++ 
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326

Query: 614 LVRAVMNNG 622
           L+      G
Sbjct: 327 LIAGYCKGG 335


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 276/530 (52%), Gaps = 25/530 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + + A+R + S+    + PD Y+Y  +I GL   G +  AL++ D+M  R  + +V
Sbjct: 116 CRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSV 172

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y +L++   K   + +A ++ + +  +    PN+VTYNV+ING+C+  R D+  ++ +
Sbjct: 173 VTYTVLLEAVCKSSGFGQAMKVLDEMRAK-GCTPNIVTYNVIINGMCREDRVDDARQILN 231

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           R+     + D+ +Y + + GLC A   E  E ++ EMVE+    + VT++ ++  FCR G
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGG 291

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   E+ + M   GC  N    NI+I  + + G+VD+A      +    C+ D+ ++ 
Sbjct: 292 MVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYT 351

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            ++ GLC+ G    A ++LNE+                     +G +  A  L+ +M ++
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY 411

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC +   T N+L+NGF    ++++A+ LF  +    C P  ++Y TL+ GLC  ER   A
Sbjct: 412 GCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAA 468

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM++     +++T+++L++  CQ   ++ A++L  Q ++ G TP++  +N L+ G
Sbjct: 469 AELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDG 528

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           +      E+AL+L   +  +    + +TY++++D L +    ++A+++++ + +  +RP 
Sbjct: 529 ITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPK 588

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + YN  L  LC       A +F    +    +P   T+ IL+  +   G
Sbjct: 589 AVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREG 638



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 267/542 (49%), Gaps = 55/542 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT----------------------------- 140
           LCR+ +   A R L +    G   DV++Y T                             
Sbjct: 80  LCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYT 139

Query: 141 ---VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
              +I GL   G +  AL++ D+M  R  + +VV Y +L++   K   + +A ++ + + 
Sbjct: 140 YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +    PN+VTYNV+ING+C+  R D+  ++ +R+     + D+ +Y + + GLC A   
Sbjct: 200 AK-GCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW 258

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E  E ++ EMVE+    + VT++ ++  FCR G ++   E+ + M   GC  N    NI+
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIV 318

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I  + + G+VD+A      +    C+ D+ ++  ++ GLC+                   
Sbjct: 319 INSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR------------------A 360

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR  DA  L+N M +  C  N  T N+ +    Q   ++ AI L ++M   GCS  +V+Y
Sbjct: 361 GRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L+NG C   R   A      +     +P+ ITY+ L+ GLC ++++D A +L  + +Q
Sbjct: 421 NALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQ 477

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                +V  +N+L+   C  G VE+A++L   M +  C PNL+T+NTL+DG+ +  + ++
Sbjct: 478 NDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           ALE+ + ++ + +  D I+Y+  +  L    R+ +A +  +     G+ P  + ++ ++ 
Sbjct: 538 ALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILS 597

Query: 617 AV 618
           A+
Sbjct: 598 AL 599



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 26/437 (5%)

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
              + D   A  + ER        P+V     +I  LC+ GR  +   +    + +    
Sbjct: 45  LIARDDLAEAARLVERSTSRGEA-PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPV 103

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D F Y + + G C+ G ++ A R+   M    +  DA TY  +I G C  G++ +   L 
Sbjct: 104 DVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M R+ C  +VV+Y +L+  + ++    +A+ + + +R K C  +  T+ V+ING+C+ 
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR- 219

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            E R+ DA  ++NR+  +G + +  +  +++ G   A + E+  
Sbjct: 220 -----------------EDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF EM    C P  V+++ L+   C+      A   +  M E G   +    +++IN +
Sbjct: 263 VLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSI 322

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  ++D A +        G +PD   Y  ++ GLC AG+ EDA +L + M ++NC PN 
Sbjct: 323 CKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VT+NT +  L + G  D+A+ +   + E      I++YN  + G C   R+  A E  N 
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442

Query: 599 ALCRGILPTTITWHILV 615
             C    P TIT+  L+
Sbjct: 443 LPCE---PNTITYTTLL 456



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 20/323 (6%)

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +R L+    + EA  + E    +    D      LI  LC+ G  + A ++L   E  G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 377 -----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            GRL  A  L+  M       +AYT   L+ G     ++ +A+ 
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L  +M R+ C P+VV+Y  L+  +CK   FG+A   + EM  KG  P+++TY+++ING+C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  ++D A ++  +    GF PD   Y  ++ GLC+A + ED   L+  M + NCVPN V
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           T++ L+    + G  ++A+E+ + + E     +    NI +  +C   R+ DAFEFLN+ 
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
              G  P TI++  +++ +   G
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAG 361



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 3/217 (1%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           +S +   I    L  A  L +  + +G +P V     LI  LC+  R  +A   ++    
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G   D+  Y+ L+ G C+  ++D A +L          PD   Y  LI GLC  G+V D
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGD 155

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L  +M +R C P++VTY  L++ + K+    +A+++ + +  +   P+I++YN+ + 
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           G+C   R+ DA + LN     G  P T+++  +++ +
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 132/264 (50%), Gaps = 5/264 (1%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           ILC+K   ++A   +  + E G    + +Y  ++NG    G +  AL +F+ +     E 
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEP 447

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N + Y  L+ G         A E+   + M+     NVVT+NV+++  C+ G  +E +E+
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEM-MQNDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             +M ++    +  T+ + + G+ +  N E A  +   +V  GI +D +TY++++D   R
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSR 566

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             +I+E  +++  +   G     V YN ++  L +  + D AI  +  +   +C  + +T
Sbjct: 567 EDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNEST 626

Query: 348 HGVLINGLCKNGYLNKAIQILNEV 371
           + +LI GL + G L +A  +L+E+
Sbjct: 627 YVILIEGLAREGLLKEARYVLSEL 650



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F       C+K   E+A   +  + E G  P++ ++ T+++G+ +  +   AL +   + 
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV 546

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  + + Y+ ++D   ++     A +++   V +  + P  V YN +++ LCK    
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFH-AVQDMGMRPKAVMYNKILSALCKRCET 605

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           D  ++ +  M  N    +  TY   I GL + G ++ A  V  E+   G+ 
Sbjct: 606 DRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 308/626 (49%), Gaps = 36/626 (5%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S   ++ +L+ E +  ++L  F S +    + H+   +  ++ +L     +  VS +L+
Sbjct: 39  VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
            ++++   C +++   VI+ Y ++++ ++ L +F R+ E FGCE  +         L  +
Sbjct: 99  QMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIRE-FGCEPSVKIYNLVLDALLSQ 157

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             F+      N++  +GL+P+V++Y  ++  L ++G + GA  +  EM  +G + + V Y
Sbjct: 158 NLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSY 217

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             +I    K GD  +A+E+  +        P V  YN +I+G+CK  RF E  ++ + M 
Sbjct: 218 TTVISSMCKLGDVDKARELAMKF------EPVVPVYNALIHGVCKECRFKEAFDLMNEMV 271

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
               + +  +Y + I  L   GNVE +  V+  M   G   +  T+ ++I GF   G++ 
Sbjct: 272 DRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVG 331

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +   LW +M R+G   NVV+YN LI GL  +G +DEAIS+W  + + +   + TT+  +I
Sbjct: 332 DAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTII 391

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            G  K+                  G L  A    N+M   GC+ N      +++   Q S
Sbjct: 392 YGFAKS------------------GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMS 433

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
             + A  L   M   GC PTV+++N  I GLC+  R   A + + +M +    P++ TY+
Sbjct: 434 MFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYN 493

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L++GL ++     A  L  +  ++    D   YN +++G    G  +  LQL   M   
Sbjct: 494 ELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVN 553

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI-LEERLRPDIISYNITLKGLCSCSRMSD 591
               + +T NT ++   K G    A+++ ++I  E+  R DII++ I L G+C+     +
Sbjct: 554 GIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEE 613

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
           A  +L++ L RGI P   TW++LVR 
Sbjct: 614 AVVYLHEMLKRGIFPNIATWNVLVRG 639



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 238/460 (51%), Gaps = 26/460 (5%)

Query: 63  LIEIQKCYC-PEDVA-LSVIQAYGKNSMPDKALDV---FQRMNEIFGCEAGILCRKRQFE 117
           L+E+    C P+DV+  +VI +  K    DKA ++   F+ +  ++      +C++ +F+
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFK 261

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   +N + ++G+ P+V SY TVI+ L   G++  +LAVF  MF RG   NV  +  LI
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            GFF +G    A  +W  ++ E  V PNVV YN +I+GLC  G  DE + +W++M+K+  
Sbjct: 322 KGFFVRGRVGDAVGLWNLMIRE-GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI 380

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             +  TY + I+G  K+G++  A   + +M+  G   + V Y  M+D  C+     + F+
Sbjct: 381 RPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFD 440

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L + M   GC   V+++N  I+GL   G+V+ A+++ + + +  C  +  T+  L++GL 
Sbjct: 441 LIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLF 500

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           +     +A  ++ E+EE                     + +  T N++M GF      + 
Sbjct: 501 RANAFREACGLIRELEE------------------RKVEFDCVTYNTIMYGFSFNGMHQQ 542

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM-LEKGWKPDMITYSLLI 475
            + L  +M   G     ++ NT +N  CK+ +   A   +  +  EK ++ D+IT+++++
Sbjct: 543 VLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIIL 602

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            G+C     + A+    + L++G  P++  +N+L+ G  S
Sbjct: 603 WGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFS 642



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 214/456 (46%), Gaps = 15/456 (3%)

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           ++ D + + E ++ L    +     +TY  MI+ L +    D    +  +MK  E    S
Sbjct: 50  QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKL-ENVPCS 108

Query: 242 FTYCSFIHGLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
                F+    +  N+ E   +++  + E G       YN ++D        K    L+ 
Sbjct: 109 QELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYN 168

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G   NV +YN+L++ L +NGKVD A  +   +  K C+ D  ++  +I+ +CK G
Sbjct: 169 NMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLG 228

Query: 360 YLNKA----------IQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            ++KA          + + N +  G   E R  +A  L+N M   G   N  + +++++ 
Sbjct: 229 DVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISC 288

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                 +E ++ +F  M  +GC P V ++ +LI G     R G+A      M+ +G  P+
Sbjct: 289 LSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPN 348

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++ Y+ LI+GLC    +D A+ +  Q  +    P+VT Y+ +I+G   +G +  A + ++
Sbjct: 349 VVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWN 408

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C PN+V Y  ++D L +    D+A ++ ++++ +   P +I++N  +KGLC   
Sbjct: 409 KMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAG 468

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           R+  A   L+       LP   T++ L+  +    A
Sbjct: 469 RVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANA 504


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 169/597 (28%), Positives = 290/597 (48%), Gaps = 65/597 (10%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCE------------------------------ 106
           ++ IQAY +      A+D F+RM ++F C                               
Sbjct: 75  VASIQAYARAGRLRAAVDAFERM-DLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 107 -AGI-------------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
            AG+              C   +   A R L SL E+G      +Y TV+ GL   G   
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +FDEM  R V  +V  +N ++    +KGD M +  +  + V++  +  N  T N+ 
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAK-VLKRGMSANKFTCNIW 252

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I GLC+ GR +E + + +RM       D  TY + + GLCK   V+ A +    M+  G 
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAYV-APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             D  TYN +IDG+C++G ++E  EL +    KG + + V+Y  LI GL   G ++ A+ 
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGE-------------- 376
           ++   + K+   D   +  L+ GLC+ G +  A+Q++NE VEEG                
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             G ++DAA ++N     G   + +T N+L++G+ +  KL++A+ L + M   G +P V+
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN+++NGLCK  +  E     +EM+ KG +P+ ITY++LI   C+  +++ A  +  + 
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            Q G  PD   +N LIHG C  G ++ A  L+  + ++       T+N L+       + 
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 611

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
             A +I+  ++ +  +PD+ +Y I + GLC  + +  A+  L + + +G +P+  T+
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 258/509 (50%), Gaps = 20/509 (3%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+   + +  + + PDV ++  V++ L + GD++ + A+  ++ +RG+  N    NI I 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  + G    A  + ER  M   V P+VVTYN ++ GLCK  +  E  +   RM      
Sbjct: 255 GLCEDGRLEEAVALVER--MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D FTY + I G CK+G ++ A  + ++ V  G   D VTY ++I+G C  G I+   EL
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 299 W-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           + E   +    ++V YN L++GL   G +  A+ +   + E+ C+ D  T+ ++INGLCK
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 358 NGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNAYT 400
            G ++ A  ++N+    G            +G     +L  A  LV RM  +G   +  T
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            NS++NG  +A K +     F+EM  KGC P  ++YN LI   CK+ +  EA   +  M 
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G  PD ++++ LI+G C++  +D A  L  +  +KG++     +NILI    S   ++
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 612

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A +++  M  +   P+L TY  L+DGL K  + D+A      ++ +   P + ++   L
Sbjct: 613 MAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRML 672

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTI 609
             L    R+S+A   ++  +  G++P  +
Sbjct: 673 NLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 238/488 (48%), Gaps = 23/488 (4%)

Query: 131 LKPDVYS--YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           L PD     Y   I    ++G L  A+  F+ M           YN ++D       + +
Sbjct: 65  LAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A +++ R+ +   V P+  T+ V +   C  GR    L +   + +   +     YC+ +
Sbjct: 125 AHKVYVRM-LAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVV 183

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGC 307
            GL   G+   A  ++ EM+   +F D  T+N ++   C+ G + E   L  +V+ R   
Sbjct: 184 RGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMS 243

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N  + NI IRGL E+G+++EA+++ E +       D  T+  L+ GLCK+  + +A Q 
Sbjct: 244 ANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQY 302

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L                   RM   GC  + +T N++++G+ ++  L+ A  L K+   K
Sbjct: 303 LG------------------RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFK 344

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  V+Y +LINGLC       A     E   K  KPD++ Y+ L+ GLC+   I  A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           L++  + +++G  PD+  YNI+I+GLC  G + DA  + ++   +  +P++ T+NTL+DG
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K    D AL++   +    + PD+I+YN  L GLC   +  +  E   + + +G  P 
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524

Query: 608 TITWHILV 615
            IT++IL+
Sbjct: 525 AITYNILI 532



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 209/434 (48%), Gaps = 19/434 (4%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y   I    + GR    ++ ++RM        +  Y + +  L  A   + A +VY  M+
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
            +G+  DA T+   +  FC  G+      L   +  +GC     +Y  ++RGL  +G   
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
            A  +++ +  ++   D  T   +++ LC+ G + ++  +L +V + G            
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                +GRL +A +LV RM  +    +  T N+LM G  + SK++ A      M  +GC 
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAP-DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   +YNT+I+G CK     EA   +K+ + KG+ PD +TY  LINGLC    I+ AL+L
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +   K   PD+ +YN L+ GLC  G +  ALQ+ + M +  C P++ TYN +++GL K
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G+   A  + N  + +   PD+ ++N  + G C   ++  A + +      GI P  IT
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 611 WHILVRAVMNNGAS 624
           ++ ++  +   G +
Sbjct: 493 YNSVLNGLCKAGKA 506



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 5/214 (2%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  Q E+A   +  + + GL PD  S+ T+I+G  ++GDL GA  +F ++ E+G    
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +NILI  +  K +   A++I+  ++      P++ TY ++++GLCK    D      
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMI-SKGYKPDLYTYRILVDGLCKAANVDRAYAHL 653

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M          T+   ++ L     V  A  +   MV  G+  + V      D     
Sbjct: 654 AEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTD----K 709

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
            +I     L E + +KG ++  +Y +L  G+ +N
Sbjct: 710 KEIAAPKILVEELMKKGHISYRAYEVLHEGVRDN 743



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 3/155 (1%)

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV--TMYNILIHGLCSAGKVEDALQLYS 527
            Y  LI  L  + ++D  +       +    PD    +Y   I     AG++  A+  + 
Sbjct: 37  AYRALIRELVSAGRLD-DVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C P    YN +MD L      D+A +++  +L   + PD  ++ + LK  C   
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           R   A   L     RG       +  +VR +  +G
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 67  QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
           Q    P+ V+  ++I  + +N   D A  +FQ+++E         F    G    K   +
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 612

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            A++    +  KG KPD+Y+Y  +++GL K+ ++  A A   EM  +G   ++  +  ++
Sbjct: 613 MAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRML 672

Query: 178 D 178
           +
Sbjct: 673 N 673


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 150/468 (32%), Positives = 240/468 (51%), Gaps = 19/468 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A+  +  +   G  PDV S+  +I G  KSG      +  D M E G+  N + YN LI
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
               K G    A+   +R  M     PNVV+YN++I+G CK    ++ L     M++   
Sbjct: 72  SCLCKAGMLAEAESYLKR--MPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGH 129

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                 Y S +   CK GNV  A  V+ EM   G   D V +N ++ G  RA KI E  E
Sbjct: 130 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 189

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M  +GC  +VV+YN +I GL +  K+DEA+ + E +++++ +    T+  LI+ LC
Sbjct: 190 LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLC 249

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K   L +A ++  ++ EG                   C   AY+   L+NG  +A +   
Sbjct: 250 KFARLQQAYEVFEKMAEG----------------PCPCTEPAYSVLILINGLCKARRPGE 293

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +F+EM  +G SPTVV+YNTL+ GL    +  +A      ML++   P+M TY +LI+
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC++ +++ A KL      KGF P + ++ +L+  L  AG+++DA +LY  M + NC  
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 413

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
            + + N L+DG+ + G  D+A +    + +  + PD  +Y+  + GLC
Sbjct: 414 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 461



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 239/477 (50%), Gaps = 23/477 (4%)

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I  LV++  +  A A+ +EM   G   +V  + +LI GFFK G + R     +R+ +E  
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRM-LEAG 59

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           ++PN + YN +I+ LCK G   E      RM ++    +  +Y   I G CKA N+E A 
Sbjct: 60  LFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKAL 118

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
              REM E G       Y++++  FC+ G + +  +++  M  KGC  ++V++N+L+ GL
Sbjct: 119 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 178

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
               K+ EA  ++  +  + C  D  T+  +I GLCK   L++A+               
Sbjct: 179 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV--------------- 223

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
               L+ RM +        T  +L++   + ++L+ A  +F++M+   C  T  +Y+ LI
Sbjct: 224 ---FLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280

Query: 441 --NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
             NGLCK  R GEA    +EM  +G  P ++TY+ L+ GL  + K+  A++L    L + 
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P++  Y ILI  LC   +VE+A +L S M+ +  VP+L  +  L+  L + G  D A 
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           E++  +     +  + S NI L G+     + +A +FL      GI+P   T+  LV
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 457



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 200/395 (50%), Gaps = 20/395 (5%)

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D  ++C  I G  K+G+ +        M+E+G+F +A+ YN +I   C+A
Sbjct: 18  EEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKA 77

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G + E     + M +    NVVSYNI+I G  +   +++A++    + E         + 
Sbjct: 78  GMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYS 137

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            ++   CK G ++KA+ +  E                  M   GC+ +    N L++G  
Sbjct: 138 SIVQSFCKTGNVSKAMDVFAE------------------MPAKGCEPDIVNFNVLLSGLW 179

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A K+  A  LF+ M+ +GC P VV+YNT+I GLCK ++  EA   ++ M ++   P  +
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN--ILIHGLCSAGKVEDALQLYS 527
           TY+ LI+ LC+  ++  A ++  +  +         Y+  ILI+GLC A +  +A +++ 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+ R   P +VTYNTL++GL  T     A+E+   +L++   P++ +Y I +  LC   
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ +AF+ L+    +G +P+   W +L+  +   G
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAG 394



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 202/391 (51%), Gaps = 22/391 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  EKA  FL  + E G  P  ++Y +++    K+G++  A+ VF EM  +G E ++
Sbjct: 109 CKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI 168

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N+L+ G ++      A+E++ R +      P+VVTYN MI GLCK  + DE + + +
Sbjct: 169 VNFNVLLSGLWRARKIHEARELF-RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 227

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA--MIDGFCR 288
           RMK+ +      TY + I  LCK   ++ A  V+ +M E         Y+   +I+G C+
Sbjct: 228 RMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCK 287

Query: 289 AGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A +  E  E+++ M GR     VV+YN L+ GLL   K+ +A+ +   + ++    +  T
Sbjct: 288 ARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFT 347

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +LI+ LCK           ++VEE        A  L++ M   G   +      L++ 
Sbjct: 348 YEILISSLCKT----------DQVEE--------AFKLLSAMRDKGFVPSLKIWEVLLSR 389

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A +L++A  L+KEMSR  C   V S N L++G+ +     EA  F+K+M + G  PD
Sbjct: 390 LARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPD 449

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
             TY  L+ GLC   K D A KL  + ++ G
Sbjct: 450 KFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 150/344 (43%), Gaps = 47/344 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S++Q++ K     KA+DVF  M    GCE  I         L R R+  +A+    S+  
Sbjct: 138 SIVQSFCKTGNVSKAMDVFAEMPAK-GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNS 196

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G KPDV +Y T+I GL K   L  A+ + + M +  V    V Y  LID   K     +
Sbjct: 197 RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQ 256

Query: 189 AKEIWERL------------------------------------VMETSVYPNVVTYNVM 212
           A E++E++                                    +    + P VVTYN +
Sbjct: 257 AYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 316

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           + GL    +  + +E+   M       + FTY   I  LCK   VE A ++   M + G 
Sbjct: 317 LEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 376

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAIS 331
                 +  ++    RAG++ + FEL++ M R  C  +V S NIL+ G+L  G VDEA  
Sbjct: 377 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 436

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
             + + +     D  T+  L+ GLC  G  ++A +++ E+   G
Sbjct: 437 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 273/546 (50%), Gaps = 34/546 (6%)

Query: 91  KALDVF-QRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGL---KPDVYS 137
           +A+DV  QRM E+ GC             LC +++ E+A   L+ + +  +    P+V S
Sbjct: 147 EAMDVLLQRMPEL-GCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVS 205

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVING    G +     +F EM +RG+  +VV Y  +IDG  K   + RA+ ++++++
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V PN+ TYN +I+G    G++ E + M + M     + +  TY S ++ LCK G  
Sbjct: 266 -DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A   +  M+  GI     TY  M+ G+   G + E  +L  +M   G   N   +NI 
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
                + G +D+A+ I+  +R++  + D+ ++G LI+ LCK                   
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK------------------L 426

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ DA    N+M   G   +    +SL+ G     K E    LF EM   G  P +V +
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFF 486

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT++  LCK  R  E    V  +   G +PD+I+Y+ LI+G C +  ID A KL    + 
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PD   YN L+HG C AG+++ A   +  M      P +VTYNT++ GLF+T    +
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E++ +++    + DI +YNI L GLC  + + +A +   +   +G+    IT++I++ 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 617 AVMNNG 622
           A++  G
Sbjct: 667 ALLKGG 672



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/580 (25%), Positives = 270/580 (46%), Gaps = 56/580 (9%)

Query: 81  QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
            AY K  + DKA+D+F +M +         +G     LC+  + + A+   N +  +G+ 
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD+  + +++ GL           +F EM   G+  N+V +N ++    K+G  M  + +
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            + +     V P+V++YN +I+G C  G  DE  ++ + M     + DSF+Y + +HG C
Sbjct: 506 VDSIEC-MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           KAG ++ A   +R+M+ +GI    VTYN ++ G  +  +  E  EL+  M   G   ++ 
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YNI++ GL ++  VDEAI +++ L  K    +  T  ++I  L K G            
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG------------ 672

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R  DA  L   +  +G   N  T   ++   I+   LE    LF  M + G +P
Sbjct: 673 ------RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC------------ 479
                N L+  L        A +++ ++ E+ +  +  T S+LI+               
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 480 ----------------QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                           ++++ID A  L  + L KG TPDV  YN ++HGL   G+  +A 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +LY +M       N+ TYN +++GL K+   D+A +++  +  + L+ +II++NI +  L
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               R  DA +        G++P  +T+ ++   ++  G+
Sbjct: 907 LKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGS 946



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 279/546 (51%), Gaps = 30/546 (5%)

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
            +E+     P DV    +VI    K  + D+A  VFQ+M +         + C       
Sbjct: 226 FLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLS 285

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             ++++  R L  +   G KP+  +YG+++N L K+G    A   FD M  +G++ +V  
Sbjct: 286 IGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y I++ G+  KG      ++   L++   + PN   +N+  +   KCG  D+ ++++++M
Sbjct: 346 YGIMLHGYATKGALSEMHDLLN-LMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           ++     D+ +Y + I  LCK G V+ AE  + +M+  G+  D V +++++ G C   K 
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++  EL+  M   G   N+V +N ++  L + G+V E   + + +       D  ++  L
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+G C  G +++A ++L       EG           M   G K ++++ N+L++G+ +A
Sbjct: 525 IDGHCLAGTIDEASKLL-------EG-----------MVSVGLKPDSFSYNTLLHGYCKA 566

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            ++++A   F++M   G +P VV+YNT+++GL + +RF EA      M+  G K D+ TY
Sbjct: 567 GRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTY 626

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++++NGLC+S  +D A+K+      KG   ++  +NI+I  L   G+ EDA+ L++ +  
Sbjct: 627 NIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              V N+VTY  +++ L + G  ++   +++ + +    P+    N  ++ L     +S 
Sbjct: 687 NGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 746

Query: 592 AFEFLN 597
           A  +L+
Sbjct: 747 AGAYLS 752



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 245/509 (48%), Gaps = 21/509 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+  +Y  +I    + G L    A F  + + G   + +  N L++G         A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER---EKDSFTYCSF 247
           ++  + + E    P+ V+YN+++ GLC   R +E LE+   M  ++      +  +Y + 
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G    G V+    ++ EM++ GI  D VTY  +IDG C+A        +++ M   G 
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N+ +YN LI G L  GK  E + + E +       +  T+G L+N LCKNG   +A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             + +   G                 +G L++   L+N M  +G   N +  N   + + 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   ++ A+ +F +M ++G SP  VSY  LI+ LCK+ R  +A     +M+ +G  PD++
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            +S L+ GLC   K +   +L  + L  G  P++  +N ++  LC  G+V +  +L  ++
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +     P++++YNTL+DG    G  D+A ++   ++   L+PD  SYN  L G C   R+
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAV 618
             A+      L  GI P  +T++ ++  +
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTILHGL 598



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 228/482 (47%), Gaps = 18/482 (3%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            C     ++A + L  +   GLKPD +SY T+++G  K+G +  A + F +M   G+   V
Sbjct: 529  CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGV 588

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            V YN ++ G F+   +  AKE++  ++   + + ++ TYN+++NGLCK    DE ++M+ 
Sbjct: 589  VTYNTILHGLFQTKRFSEAKELYLNMINSGTKW-DIYTYNIILNGLCKSNCVDEAIKMFQ 647

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +     + +  T+   I  L K G  E A  ++  +  +G+  + VTY  +++     G
Sbjct: 648  NLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707

Query: 291  KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
             ++E   L+  M + G   N    N L+R LL  G +  A +    L E+N + +++T  
Sbjct: 708  SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 767

Query: 350  VLINGLCKNGY------LNKAIQILNEVEEGG----EGRLADAASLVNRMDKHGCKLNAY 399
            +LI+    + Y      L K  +ILNE           R+ DA SL   M   G   +  
Sbjct: 768  MLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVV 827

Query: 400  TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
            T N++++G  Q  +   A  L+  M        + +YN ++NGLCK     EA+   + +
Sbjct: 828  TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSL 887

Query: 460  LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
              KG + ++IT++++I  L +  + + A+ L       G  PDV  Y ++   L   G +
Sbjct: 888  CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947

Query: 520  EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA------LEIWNHILEERLRPDI 573
            E+   L+  M+K     +    N L+  L + GD  +A      L+  N  LE     ++
Sbjct: 948  EEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSEL 1007

Query: 574  IS 575
            IS
Sbjct: 1008 IS 1009



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 226/491 (46%), Gaps = 34/491 (6%)

Query: 141 VINGLVKSGDL-LG-ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE------- 191
           VI    +SG L LG AL +FDE+       +VV +N L+    +                
Sbjct: 18  VIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVS 77

Query: 192 IWERLVME--TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++ R+V +    V PN  TY+++I   C+ G  +     +  + K     D       ++
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 250 GLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           GLC    V E  + + + M E G   D V+YN ++ G C   + +E  EL  +M      
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVW 197

Query: 309 ----NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               NVVSY+ +I G    G+VD+  +++  + ++    D  T+  +I+GLCK    ++ 
Sbjct: 198 SCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDR- 256

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                            A ++  +M  +G K N  T N L++G++   K +  + + +EM
Sbjct: 257 -----------------AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S  G  P   +Y +L+N LCK  R  EA  F   M+ KG KP + TY ++++G      +
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                L    +  G +P+  ++NI        G ++ A+ +++ M+++   P+ V+Y  L
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D L K G  D A   +N ++ E + PDI+ ++  + GLC+  +     E   + L  GI
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 605 LPTTITWHILV 615
            P  + ++ ++
Sbjct: 480 HPNIVFFNTIL 490



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 14/271 (5%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS-------KLENAI 418
           +++ +    G   L DA  L + +  H    +    N L+    ++S       + E  +
Sbjct: 17  RVIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVV 76

Query: 419 FLFKEMSRK---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            LF  M R      +P   +Y+ LI   C++      ++    +L+ GW+ D I  + L+
Sbjct: 77  SLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLL 136

Query: 476 NGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR-- 532
           NGLC  K++  A+ +  Q + + G  PD   YNIL+ GLC+  + E+AL+L   M     
Sbjct: 137 NGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQV 196

Query: 533 -NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
            +C PN+V+Y+T+++G F  G  DK   ++  +++  + PD+++Y   + GLC       
Sbjct: 197 WSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDR 256

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A       +  G+ P   T++ L+   ++ G
Sbjct: 257 AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG 287


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 152/465 (32%), Positives = 256/465 (55%), Gaps = 33/465 (7%)

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            +RG E + V    L+ G + +     A ++++ +  E  ++ +  TY ++INGLCK  +
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMT-EKGLFGDAKTYGILINGLCKARK 127

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
               +++ ++MK N +  D FTY   I  LCK G    A  ++ EM+ +GI  D V Y++
Sbjct: 128 TGLAIKLHEKMKGNCK-GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186

Query: 282 MIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG CR G++KE  E ++ M GR    +V +YN LI GL   G   E      L+ ++ 
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
            + D+ T  +LI+GLCK                  EG++ +A  ++  M   G + +  T
Sbjct: 247 FSPDAFTFTILIDGLCK------------------EGKVGEAQQILELMHHKGKEPDILT 288

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+LMNG     +LE+A  LF+ ++ +G    V SYN LING CK ++  EA+   +EM 
Sbjct: 289 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR 348

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKL------CCQFLQKGFTPDVTMYNILIHGLC 514
            KG KP  +TY+ LI  LCQS ++  A KL      C QFL+      ++ Y +L+ GLC
Sbjct: 349 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK------LSTYCVLLDGLC 402

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G +E+A+ L+ ++KK    PN+  ++ L+DG+ + G  ++A + ++ I +  L PD I
Sbjct: 403 KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 462

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +YNI + GLC+   +S+A + L     +G LP +IT++++++ ++
Sbjct: 463 AYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 238/481 (49%), Gaps = 56/481 (11%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           ++G +PD  +  T++ G+     +  A+ +FDEM E+G+  +   Y ILI+G  K     
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ E+  M+ +   +V TY ++I+ LCK G   E L+M+  M       D   Y S 
Sbjct: 130 LAIKLHEK--MKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
           + GLC+ G ++ A   ++EM   GI  D  TYN++I G  RAG  KE      +M  +G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +  ++ ILI GL + GKV EA  I EL+  K    D  T+  L+NGLC          
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL--------- 298

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     G+L DA  L   +   G KLN ++ N L+NG+ +  K++ A  LF+EM  
Sbjct: 299 ---------VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349

Query: 427 KGCSPTVVSYNTLI-----------------------------------NGLCKVERFGE 451
           KG  P+ V+YNTLI                                   +GLCK     E
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 409

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    + + +   KP++  +S+L++G+C++ K++ A K   +  + G  PD   YNILI+
Sbjct: 410 AIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 469

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC+ G + +A++L   M+++ C+P+ +T+N ++  L K  +  +A+++   +      P
Sbjct: 470 GLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 529

Query: 572 D 572
           D
Sbjct: 530 D 530



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 253/491 (51%), Gaps = 32/491 (6%)

Query: 66  IQKCYCPEDVALSVI--QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQ 115
           +++ + P+ V ++ +    + +N +PD A+ +F  M E         +G     LC+ R+
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARK 127

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
              A + L+   +   K DV++YG +I+ L K G    AL +F EM   G+  +VV Y+ 
Sbjct: 128 TGLAIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+DG  + G    A E ++ +     +  +V TYN +I+GL + G + E     + M   
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D+FT+   I GLCK G V  A+++   M   G   D +TYN +++G C  G++++ 
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            +L+E +  +G  LNV SYNILI G  ++ K+DEA  ++E +R K     + T+  LI  
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC++G +  A ++  E++  G+                  KL+ Y    L++G  +   L
Sbjct: 366 LCQSGRVRTAQKLFVEMQTCGQF----------------LKLSTYCV--LLDGLCKNGHL 407

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E AI LF+ + +    P +  ++ L++G+C+  +  EA+    E+ + G +PD I Y++L
Sbjct: 408 EEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 467

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           INGLC    +  A+KL  Q  +KG  PD   +N++I  L    ++ +A+QL   M+ RN 
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 527

Query: 535 VPNLVTYNTLM 545
            P+    + L+
Sbjct: 528 SPDEAVTSMLL 538



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 21/404 (5%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E D+ T  + + G+     +  A +++ EM E G+F DA TY  +I+G C+A K     +
Sbjct: 74  EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           L E M      +V +Y ++I  L ++G   EA+ ++  +       D   +  L++GLC+
Sbjct: 134 LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAAS-------------------LVNRMDKHGCKLNA 398
            G L +A++   E+E  G G  AD  +                    +N M   G   +A
Sbjct: 194 FGRLKEALEFFKEME--GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +T   L++G  +  K+  A  + + M  KG  P +++YNTL+NGLC V +  +A    + 
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           + ++G K ++ +Y++LING C+ +KID A +L  +   KG  P    YN LI  LC +G+
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           V  A +L+  M+       L TY  L+DGL K G  ++A++++  I +   +P+I  ++I
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L G+C   ++ +A++  ++    G+ P TI ++IL+  + N G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKG 475


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 166/546 (30%), Positives = 269/546 (49%), Gaps = 34/546 (6%)

Query: 91  KALDVF-QRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE---KGLKPDVYS 137
           +A+DV  QRM E+ GC             LC +++ E+A   L+ + +   +   P+V S
Sbjct: 143 EAMDVLLQRMPEL-GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  VING    G +     +F EM +RG+  +VV Y  +IDG  K   + RA+ ++++++
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +    PN  TYN +I+G    G++ E ++M + M     + D +TY S ++ LCK G  
Sbjct: 262 -DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A   +  M+  GI     TY  +I G+   G + E     ++M   G   +   +NI 
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
                + G +D+A+ I+  +R+   + +   +G LI+ LCK                   
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK------------------L 422

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ DA    N+M   G   N    NSL+ G     K E A  L  EM  +G  P  V +
Sbjct: 423 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 482

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NTLI  LC V R  E    +  M   G +PD  +Y+ LI+G C + + D A K+    + 
Sbjct: 483 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS 542

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G +P    YN L+HG CSA +++DA  L+  M ++   P +VTYNT++ GLF+T    +
Sbjct: 543 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 602

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E++ +++    + DI +YNI L GLC  + + +AF+       +G+    IT+ I++ 
Sbjct: 603 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 662

Query: 617 AVMNNG 622
           A++  G
Sbjct: 663 ALLKGG 668



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 272/537 (50%), Gaps = 30/537 (5%)

Query: 72  PEDVAL--SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKR 121
           P DV    +VI    K  + D+A  VFQ+M        N  + C         ++++  +
Sbjct: 231 PPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQ 290

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  +  +GLKPD Y+YG+++N L K+G    A   FD M  +G++  V  Y ILI G+ 
Sbjct: 291 MLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYA 350

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
            KG         + L++E  + P+   +N+  +   KCG  D+ ++++++M+++    + 
Sbjct: 351 TKGALSEMHSFLD-LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 409

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WE 300
             Y + I  LCK G V+ AE  + +M+  G+  + V +N+++ G C   K +   EL +E
Sbjct: 410 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 469

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ +  C N V +N LI  L   G+V E   + +L+       D+ ++  LI+G C  G 
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG- 528

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                            R  +A  + + M   G      T N+L++G+  AS++++A  L
Sbjct: 529 -----------------RTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F+EM RKG +P VV+YNT+++GL + +RF EA      M+  G K D+ TY++++NGLC+
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           S  +D A K+      KG   ++  + I+I  L   G+ EDA+ L++ +     VPN+VT
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           Y  + + L + G  ++   +++ + +    P+    N  ++ L     +S A  +L+
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 748



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 234/487 (48%), Gaps = 30/487 (6%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI----WERLVMETS- 201
           +S  L  AL +FDE+       +V  +N L+     +     A E+    + R+V E S 
Sbjct: 26  RSLGLDDALKLFDELLHHARPASVRAFNHLLTAV-SRARCSSASELAVSHFNRMVRECSD 84

Query: 202 -VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EG 259
            V PN+ TY+++I   C+ G  +     +  + K     D       + GLC    V E 
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNI 315
            + + + M E G   D V+Y  ++ G C   + +E  EL  +M    GR+   NVVSY+I
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G    G+VD+  +++  + ++    D  T+  +I+GLCK    ++A        EG 
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRA--------EG- 255

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                    +  +M  +G K N YT N L++G++   K +  + + +EMS +G  P   +
Sbjct: 256 ---------VFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYT 306

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y +L+N LCK  R  EA  F   M+ KG KP + TY +LI+G      +          +
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G +PD  ++NI        G ++ A+ +++ M++    PN+V Y  L+D L K G  D
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A   +N ++ E + P+I+ +N  + GLC+  +   A E + + L +GI P  + ++ L+
Sbjct: 427 DAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486

Query: 616 RAVMNNG 622
             + N G
Sbjct: 487 CNLCNVG 493



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 19/461 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC+  +  +A+ F +S+  KG+KP V +YG +I+G    G L    +  D M 
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E G+  +   +NI    + K G   +A +I+ ++  +  + PNVV Y  +I+ LCK GR 
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRV 425

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+    +++M       +   + S ++GLC     E AE +  EM++ GI  +AV +N +
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I   C  G++ E   L ++M   G   +  SY  LI G    G+ DEA  +++ +     
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
           +    T+  L++G C    ++ A  +  E+   G                   R ++A  
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L   M   G K + YT N ++NG  +++ ++ A  +F+ +  KG    ++++  +I  L 
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  R  +A      +   G  P+++TY L+   L +   ++    L     + G  P+  
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           M N L+  L   G +  A    S + +RN      T + LM
Sbjct: 726 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLM 766



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 2/255 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A++  + +   GL P   +Y T+++G   +  +  A  +F EM  +GV   V
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G F+   +  AKE++  ++  +    ++ TYN+++NGLCK    DE  +M+ 
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMI-NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +     + +  T+   I  L K G  E A  ++  +  +G+  + VTY  + +     G
Sbjct: 644 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E   L+  M + G   N    N L+R LL  G +  A +    L E+N + +++T  
Sbjct: 704 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 763

Query: 350 VLINGLCKNGYLNKA 364
           +L++    + Y + A
Sbjct: 764 LLMSIFTSDEYQHHA 778



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P +V   +++  Y   S  D A  +F+ M    G   G+         L + ++F +AK 
Sbjct: 547 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
              ++   G K D+Y+Y  ++NGL KS  +  A  +F  +  +G++ N++ + I+I    
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G    A +++   +    + PNVVTY ++   L + G  +E   ++  M+KN    +S
Sbjct: 666 KGGRKEDAMDLFAA-IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 724

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
               + +  L   G++  A     ++ E    V+A T + ++  F
Sbjct: 725 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIF 769


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 263/513 (51%), Gaps = 26/513 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L+ + ++G+ P V  +  VI GL K+G    AL  F  +       +
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ +NIL+D   K G    A +I+E +   +   PNVVTY  +INGLCK G+ D  +E+ 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     +  TY   + GLCKAG  +    + +EM   G   D + YN +++G C++
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  EL ++M R GC   VV+YN L+     + +VD A  + +++ E+ C  D   +
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I GLC++                   RL DA +L+ +M    C  +  T +++++G 
Sbjct: 280 NTVIAGLCRD------------------ARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 409 -----IQAS-KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
                + A  KLE A  + + M + GC P   +Y  +I GLC+  +  +A + ++ M++ 
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD+ ++S++I  LC+S  +D A K+     ++   P+   Y  LI GL   G+V+ A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++++  M + +  P + TYN+++DGL   G  ++A+ +   ++ +   PD  SY   ++G
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           LC  S + +A+E       +G       +++LV
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 283/522 (54%), Gaps = 31/522 (5%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C   +L R  Q  +A +      E+   P+ ++YG++I+GL K+G L  A  + DEM +R
Sbjct: 3   CALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+   V  +N +I G  K G +  A   + + V  T   P+++T+N++++ L K GR +E
Sbjct: 60  GIPPGVAVHNGVIKGLCKAGRFGDALGYF-KTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 225 CLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             ++++ M  + +   +  TY + I+GLCK G ++ A  +   M E+G   + +TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G C+AG+  + F L + M R+G   +V+ YN L+ GL ++ ++DEA+ + +L+    C 
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
               T+  L+   C++  +++A +++  + E G                  C  +    N
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG------------------CPPDVINYN 280

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG-----EAYSFVK 457
           +++ G  + ++L++A  L K+M    C P V++Y+T+I+GLCK  R       EA   + 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 458 EMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           EM+++ G  P+  TY+++I GLC+++K   AL L  + +     PD++ ++++I  LC +
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
             ++ A +++  M +R C PN V Y  L+DGL K G+ DKA+ ++  ++ E  RP + +Y
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATY 459

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           N  L GLC   R+ +A   +   + +   P   ++  L+R +
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 233/457 (50%), Gaps = 30/457 (6%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N  ++   + G + +A +++     E    PN  TY  +I+GLCK G+ D+  E+ D M+
Sbjct: 2   NCALNLLVRAGQHGQAVQLFR----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                     +   I GLCKAG    A   ++ +  +    D +T+N ++D   ++G+++
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 294 ECFELWEVMGRKG-CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           E F+++E M     CL NVV+Y  +I GL ++GK+D AI + +L+ E  C  +  T+ VL
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           + GLCK G  +K   +L E                  M + G + +    N+L+NG  ++
Sbjct: 178 VEGLCKAGRTDKGFTLLQE------------------MTRRGFQPDVIMYNTLLNGLCKS 219

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +L+ A+ L + M R GC PTVV+YN+L+   C+ ++   A+  ++ M E+G  PD+I Y
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC------SAGKVEDALQL 525
           + +I GLC+  ++D A  L  Q +     PDV  Y+ +I GLC      +  K+E A ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              MK+  C PN  TY  +++GL +     +AL +   +++  + PD+ S+++ +  LC 
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +  A++       R   P  + +  L+  +   G
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 223/475 (46%), Gaps = 36/475 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA-LSVIQAYGKNSMPDKALDVFQRM 99
           F+ ++  L+    V    +I E +       P  V   +VI    K+   D+A+++   M
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162

Query: 100 NEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           NE   C   I        LC+  + +K    L  +  +G +PDV  Y T++NGL KS  L
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             AL +   M   G    VV YN L++ F +     RA  + + ++ E    P+V+ YN 
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ-VMSERGCPPDVINYNT 281

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV------EGAERVYR 265
           +I GLC+  R D+   +  +M       D  TY + I GLCK   V      E A  +  
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENG 324
            M ++G   +A TY  +I+G CRA K ++   L   M   +   ++ S++++I  L ++ 
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            +D A  I+ ++ E+ C  +   +  LI+GL K G ++KA+++   + E     +A    
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA---- 457

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                          T NS+++G     ++E A+ + + M  K C P   SY  LI GLC
Sbjct: 458 ---------------TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           +V    EAY   + +  KG+  ++  Y++L+N LC+ K++  A  +  + ++ G+
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 22/391 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI+   L+  L           L    TR  G+     +++ +L  L   + +     ++
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCR 112
           +L+    CY       S+++ + ++   D+A  + Q M+E  GC   +         LCR
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE-RGCPPDVINYNTVIAGLCR 288

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK------SGDLLGALAVFDEMFERGV 166
             + + A+  L  +      PDV +Y T+I+GL K         L  A  + + M + G 
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGC 348

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N   Y ++I+G  +     +A  +  R++ ++ V P++ +++++I  LCK    D   
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDG 285
           +++  M + E + +   Y + I GL K G V+ A RV+  MVES  F   V TYN+++DG
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES--FRPGVATYNSVLDG 465

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C  G+I+E   + E M  K C  +  SY  LIRGL     V+EA  +++ +  K    +
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
              + VL+N LCK   L+ A  + N++ E G
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 263/513 (51%), Gaps = 26/513 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L+ + ++G+ P V  +  VI GL K+G    AL  F  +       +
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ +NIL+D   K G    A +I+E +   +   PNVVTY  +INGLCK G+ D  +E+ 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     +  TY   + GLCKAG  +    + +EM   G   D + YN +++G C++
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  EL ++M R GC   VV+YN L+     + +VD A  + +++ E+ C  D   +
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I GLC++                   RL DA +L+ +M    C  +  T +++++G 
Sbjct: 280 NTVIAGLCRD------------------ARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 409 -----IQAS-KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
                + A  KLE A  + + M + GC P   +Y  +I GLC+  +  +A + ++ M++ 
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD+ ++S++I  LC+S  +D A K+     ++   P+   Y  LI GL   G+V+ A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++++  M + +  P + TYN+++DGL   G  ++A+ +   ++ +   PD  SY   ++G
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           LC  S + +A+E       +G       +++LV
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 283/522 (54%), Gaps = 31/522 (5%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C   +L R  Q  +A +      E+   P+ ++YG++I+GL K+G L  A  + DEM +R
Sbjct: 3   CALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+   V  +N +I G  K G +  A   + + V  T   P+++T+N++++ L K GR +E
Sbjct: 60  GIPPGVAVHNGVIRGLCKAGRFGDALGYF-KTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 225 CLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             ++++ M  + +   +  TY + I+GLCK G ++ A  +   M E+G   + +TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G C+AG+  + F L + M R+G   +V+ YN L+ GL ++ ++DEA+ + +L+    C 
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
               T+  L+   C++  +++A +++  + E G                  C  +    N
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG------------------CPPDVINYN 280

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG-----EAYSFVK 457
           +++ G  + ++L++A  L K+M    C P V++Y+T+I+GLCK  R       EA   + 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 458 EMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           EM+++ G  P+  TY+++I GLC+++K   AL L  + +     PD++ ++++I  LC +
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
             ++ A +++  M +R C PN V Y  L+DGL K G+ DKA+ ++  ++ E  RP + +Y
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATY 459

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           N  L GLC   R+ +A   +   + +   P   ++  L+R +
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 233/457 (50%), Gaps = 30/457 (6%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N  ++   + G + +A +++     E    PN  TY  +I+GLCK G+ D+  E+ D M+
Sbjct: 2   NCALNLLVRAGQHGQAVQLFR----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                     +   I GLCKAG    A   ++ +  +    D +T+N ++D   ++G+++
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 294 ECFELWEVMGRKG-CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           E F+++E M     CL NVV+Y  +I GL ++GK+D AI + +L+ E  C  +  T+ VL
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           + GLCK G  +K   +L E                  M + G + +    N+L+NG  ++
Sbjct: 178 VEGLCKAGRTDKGFTLLQE------------------MTRRGFQPDVIMYNTLLNGLCKS 219

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +L+ A+ L + M R GC PTVV+YN+L+   C+ ++   A+  ++ M E+G  PD+I Y
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC------SAGKVEDALQL 525
           + +I GLC+  ++D A  L  Q +     PDV  Y+ +I GLC      +  K+E A ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              MK+  C PN  TY  +++GL +     +AL +   +++  + PD+ S+++ +  LC 
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +  A++       R   P  + +  L+  +   G
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 223/475 (46%), Gaps = 36/475 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA-LSVIQAYGKNSMPDKALDVFQRM 99
           F+ ++  L+    V    +I E +       P  V   +VI    K+   D+A+++   M
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162

Query: 100 NEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           NE   C   I        LC+  + +K    L  +  +G +PDV  Y T++NGL KS  L
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             AL +   M   G    VV YN L++ F +     RA  + + ++ E    P+V+ YN 
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ-VMSERGCPPDVINYNT 281

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV------EGAERVYR 265
           +I GLC+  R D+   +  +M       D  TY + I GLCK   V      E A  +  
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENG 324
            M ++G   +A TY  +I+G CRA K ++   L   M   +   ++ S++++I  L ++ 
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            +D A  I+ ++ E+ C  +   +  LI+GL K G ++KA+++   + E     +A    
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA---- 457

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                          T NS+++G     ++E A+ + + M  K C P   SY  LI GLC
Sbjct: 458 ---------------TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           +V    EAY   + +  KG+  ++  Y++L+N LC+ K++  A  +  + ++ G+
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 22/391 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI+   L+  L           L    TR  G+     +++ +L  L   + +     ++
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCR 112
           +L+    CY       S+++ + ++   D+A  + Q M+E  GC   +         LCR
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE-RGCPPDVINYNTVIAGLCR 288

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK------SGDLLGALAVFDEMFERGV 166
             + + A+  L  +      PDV +Y T+I+GL K         L  A  + + M + G 
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGC 348

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N   Y ++I+G  +     +A  +  R++ ++ V P++ +++++I  LCK    D   
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDG 285
           +++  M + E + +   Y + I GL K G V+ A RV+  MVES  F   V TYN+++DG
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES--FRPGVATYNSVLDG 465

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C  G+I+E   + E M  K C  +  SY  LIRGL     V+EA  +++ +  K    +
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
              + VL+N LCK   L+ A  + N++ E G
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 181/676 (26%), Positives = 310/676 (45%), Gaps = 127/676 (18%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
           P++  ++++ +AY ++    +A++  + M E  G E  ++         C     E A+R
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEM-EGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGF 180
            L SL  KGL P+V +Y  ++ G  K G +  A  V  EM E G +  + V Y ++I+G+
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            ++G    A  +   +  +  ++ N+  YN MINGLCK GR +E  ++   M+      D
Sbjct: 335 CQRGRMDDATRVRNEM-RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC------------- 287
            ++Y + I G C+ G++  A  + R MV +G+    +TYN ++ GFC             
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 288 ----------------------RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENG 324
                                 +AGK ++   LW E + R    NV+++N +I GL + G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
           ++ EA  + + ++E  C  DS T+  L +G CK G L  A  ++N++E  G         
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 376 -------------------------------------------EGRLADAASLVNRMDKH 392
                                                      EG L +A +L   M  +
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR----KGCSPTVVS------------- 435
           G   N + C++LM+ F +  K++ A  + +++       GCS + +              
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 436 ---------YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
                    +N +I GLCK  R  +A S  + +  K + PD  TYS LI+G   S  ID 
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L    L  G TP++  YN LI+GLC +GK+  A+ L++ ++ +   PN +TYNTL+D
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
              K G   +A ++   ++EE ++P +I+Y+I + GLC+   M +A + L+  +   + P
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873

Query: 607 TTITWHILVRAVMNNG 622
             IT+  L+   + +G
Sbjct: 874 NYITYCTLIHGYIKSG 889



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 250/559 (44%), Gaps = 116/559 (20%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA--------------- 154
           LC+  + E+ ++ L  + + G++PD YSY T+I+G  + G +  A               
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 155 -------------LAVFDE-------MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                        L   D+       M +RGV  N +  + L+DG FK G   +A  +W+
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
              +   +  NV+T+N +INGLCK GR  E  E+ DRMK+     DS TY +   G CK 
Sbjct: 489 E-TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKL 547

Query: 255 GNVEGAER-----------------------------------VYREMVESGIFVDAVTY 279
           G +  A                                     ++ EM   G+  + VTY
Sbjct: 548 GQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTY 607

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA--------- 329
            A+I G+C+ G + E   L+  M   G   NV   + L+    + GKVDEA         
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN 667

Query: 330 -----------ISIWELLREKNCNADSTTHG------VLINGLCKNGYLNKAIQILNEVE 372
                      I I ++    +  AD   H       V+I GLCK+G             
Sbjct: 668 IDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG------------- 714

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                R+ADA SL   +       + +T +SL++G   +  ++ A  L   M   G +P 
Sbjct: 715 -----RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           +++YN+LI GLCK  +   A +   ++  KG  P+ ITY+ LI+  C+  K   A KL  
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + +++G  P V  Y+ILI+GLC+ G +E+A++L   M + N  PN +TY TL+ G  K+G
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889

Query: 553 DCDKALEIWNHILEERLRP 571
           + ++  ++++ +    L P
Sbjct: 890 NMEEISKLYDEMHIRGLLP 908



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 263/547 (48%), Gaps = 39/547 (7%)

Query: 89  PDKALDVFQ----RMNEIFGCEA-GILCRKRQFEKAKRFLNSLWEKG--LKP---DVY-- 136
           PD AL +F+    R + +   +   IL R R+F  A+  L+SL      L P   +VY  
Sbjct: 84  PDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRD 143

Query: 137 ------SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
                 S+  ++     +G L  AL VFD M + G   ++   N L++   + GD   A 
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++ ++ +   V P+  T  +M    C+ GR  + +E  + M+    E +   Y + +  
Sbjct: 204 MVYGQMRI-AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDC 262

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
            C  G  E A R+   +   G+  + VTY  ++ G+C+ G+++E   + + M   G + V
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 311 --VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             V+Y ++I G  + G++D+A  +   +R+   + +   +  +INGLCK G + +  ++L
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+E+ G            R DK       Y+ N+L++G+ +   +  A  + + M R G
Sbjct: 383 QEMEDVGM-----------RPDK-------YSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            + T ++YNTL+ G C +    +A      ML++G  P+ I+ S L++GL ++ K + AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + L +G   +V  +N +I+GLC  G++ +A +L   MK+  C P+ +TY TL DG 
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G    A  + N +      P +  +N  + G     +     +  ++   RG+ P  
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 609 ITWHILV 615
           +T+  L+
Sbjct: 605 VTYGALI 611


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 169/581 (29%), Positives = 280/581 (48%), Gaps = 45/581 (7%)

Query: 86  NSMPDKALDVFQRM-NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDV 135
           N++ +   D+FQ + N  + C++             R     KA   +N     G  P V
Sbjct: 108 NTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGV 167

Query: 136 YSYGTVINGLVKSGDLLG-ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            SY  +++ ++++   +  A  +F EM E GV  NV  YNILI GF   G+       + 
Sbjct: 168 LSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFG 227

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +       PNVVTYN +I+  CK  +  E  ++   M       +  +Y   I+GLC+ 
Sbjct: 228 EM-ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G ++    +  EM +     D VT+N +I+G+C  G   +   L   M + G   NVV+Y
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI  + + G ++ A+   + +R++  + +  T+  LI+G  + G+L +A QI+ E+ E
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GR+ DA+ L+  M + G   +  + +++++GF +  +LE 
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L  EM  KG SP V +Y++LI GLCK  R GE     +EML  G  PD +TY+ LIN
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C    +D AL+L  + +QKGF+PD+  YN+LI+G     + ++A +L   +     VP
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586

Query: 537 NLVTYNTLMDGL----FKT------GDCDKAL-----EIWNHILEERLRPDIISYNITLK 581
           N +TYNTL+D      FK+      G C K L      +   +L++  + +   YN+ + 
Sbjct: 587 NEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           G      +  A+    + L  G  P ++T   L +++ + G
Sbjct: 647 GHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/628 (27%), Positives = 301/628 (47%), Gaps = 84/628 (13%)

Query: 36  HSPHLFHHILR------RLIDPKLVVHVSRILE-LIEIQKCYCPEDVALSVIQAYGKNSM 88
           H+PH +  I         L+  K +V++ R  E L  +   + P+  +  ++++   +S+
Sbjct: 4   HNPHYYSSIFTLCSSGDALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSL 63

Query: 89  PDKALDVFQRMNEIFGCEAG-----ILCRKRQFEKAKRF-----LNSLWEKG------LK 132
             K LD + R  + F  +       IL R + ++ A+       +N++ E G      LK
Sbjct: 64  VLKFLD-WARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLK 122

Query: 133 PDVY---SYGTVINGLVKSGDLLG----ALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
              Y   S   V + +VKS   +     AL++ +     G    V+ YN ++D   +   
Sbjct: 123 NSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQ 182

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            ++  E   + ++E+ V PNV TYN++I                                
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILI-------------------------------- 210

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
               G C AGN+E     + EM  +G   + VTYN +ID +C+  KI E F+L  +M  K
Sbjct: 211 ---RGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   N++SYN++I GL   G++ E   I E + ++    D  T   LING C  G  ++A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +  E+ + G                  G L  A   +++M   G   N  T  +L++G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F Q   L+ A  + KEM   G +PT+++YN LING C + R  +A   ++EM+E+G+ PD
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +++YS +I+G C++++++ A +L  + + KG +PDV  Y+ LI GLC   ++ +   L+ 
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      P+ VTY +L++     GD DKAL + + ++++   PDI++YN+ + G    S
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R  +A   L   L    +P  IT++ L+
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 218/448 (48%), Gaps = 34/448 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R+  +A + L  +  KGL P++ SY  VINGL + G +     + +EM +R    + 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LI+G+   G++ +A  +   +V +  + PNVVTY  +IN +CK G  +  +E  D
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  TY + I G  + G ++ A ++ +EMVE+G     +TYNA+I+G C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++   L + M  +G + +VVSY+ +I G   N ++++A  +   +  K  + D  T+ 
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            LI GLCK   L +   +  E+   G                 EG L  A  L + M + 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN----------- 441
           G   +  T N L+NGF + S+ + A  L  ++  +   P  ++YNTLI+           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 442 ----GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
               G C      EA   ++ ML+KG+K +   Y+++I+G  +   I+ A  L  + L  
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL 525
           GF P       L   L   GK  +  QL
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQL 695



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 120/312 (38%), Gaps = 66/312 (21%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIF--GCEAGI---------LCRK 113
           I++ + P+ V+ S +I  + +N   +KA   FQ   E+   G    +         LC++
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKA---FQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+  +       +   GL PD  +Y ++IN     GDL  AL + DEM ++G   ++V Y
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN----------------------- 210
           N+LI+GF K+     AK +  +L+ E SV PN +TYN                       
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCM 615

Query: 211 ---------------------------VMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                                      V+I+G  K G  ++   ++  M  +     S T
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
             +    L   G      ++    ++S    +A     +I    + G +   F + + M 
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735

Query: 304 RKGCLNVVSYNI 315
             G L   S N+
Sbjct: 736 LSGLLPYSSANL 747


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/624 (28%), Positives = 310/624 (49%), Gaps = 28/624 (4%)

Query: 8   LLNLLKAEKNPHTALALFD---SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
           LLN L   +  +  L LFD   SA  +P      +++  ++R L + K       ++  +
Sbjct: 102 LLNGLLRFRRFNDVLLLFDDIVSANVQPDI----YIYSAVVRSLCELKDFNKAKEMIHWM 157

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLN 124
           E  +C     V   +I    K+    +AL++   + +  G EA ++    +F +A+    
Sbjct: 158 EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQK-GLEANVVTYYGKFNEAELLFK 216

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            + EKGL  +  +Y  +I+   + G++  A+   D+M +  +E  V  YN LI+G+ K G
Sbjct: 217 EMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLG 276

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
           +   AK  ++ ++ +  + P VVTY  +I+G C  G + +  ++++ M       +++T+
Sbjct: 277 NASAAKYYFDEMI-DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + I GLC+A  +  A R++ EM E  I    VTYN MI+G CR+G I E F L + M  
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           KG + +  +Y  LI GL   G+V EA    + L + +   ++  +  L++G CK G    
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455

Query: 364 AIQILN-EVEEG-------------GEGRLADAASL---VNRMDKHGCKLNAYTCNSLMN 406
           A+      VE G             G  R  D  +L   +  M  HG + +A    ++++
Sbjct: 456 AVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMID 515

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +A  L+ A  L+  M  +GC P VV+Y  LINGLCK     +A    KE L     P
Sbjct: 516 RHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTP 575

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + ITY   ++ L +   ++ A++L    L KGF      YNILI G C  GK+E+A +L 
Sbjct: 576 NHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLL 634

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M   + +P+ +TY+T++    K  +  +A+++W+ +L++ L+PD ++Y+  + G C  
Sbjct: 635 HGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIA 694

Query: 587 SRMSDAFEFLNDALCRGILPTTIT 610
             +  AFE  ++ + RG+    +T
Sbjct: 695 GELEKAFELRDEMIRRGMRSNHVT 718



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 255/517 (49%), Gaps = 30/517 (5%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           I+      LC  + F KAK  ++ +     K  +  Y  +I+GL KS  +  AL + + +
Sbjct: 133 IYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCL 192

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            ++G+E NVV Y     G F + + +  KE+ E+      +  N +TY+++I+  C+ G 
Sbjct: 193 MQKGLEANVVTYY----GKFNEAELL-FKEMGEK-----GLCANHITYSILIDSFCRRGE 242

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            D  +   D+M K   E   + Y S I+G CK GN   A+  + EM++ G+    VTY +
Sbjct: 243 MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302

Query: 282 MIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I G+C  G+  + F+++  M  KG   N  ++  +I GL     + EAI ++  ++E+ 
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
                 T+ V+I G C++G +++A  +L+E+   G+G + D                 YT
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV--GKGFVPDT----------------YT 404

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L++G     ++  A     ++ +       + Y+ L++G CK  RF +A S  + M+
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E+G   D++ Y++LI+G  +         L  +    G  PD  +Y  +I     AG ++
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A  L+  M    C+PN+VTY  L++GL K G  DKA  +    L   + P+ I+Y   L
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             L     M  A + L+ A+ +G L TT++++IL+R 
Sbjct: 585 DHLTRGGNMEKAVQ-LHHAMLKGFLATTVSYNILIRG 620



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 28/422 (6%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RL+ + ++ P V T + ++NGL +  RF++ L ++D +     + D + Y + +  LC+ 
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
            +   A+ +   M  +   +  V YN +I G C++ +I E  E+   + +KG   NVV+Y
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
                     GK +EA  +++ + EK   A+  T+ +LI+  C+ G ++ AI  L+    
Sbjct: 205 Y---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLD---- 251

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                         +M K   +   Y  NSL+NG+ +      A + F EM  KG +PTV
Sbjct: 252 --------------KMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTV 297

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y +LI+G C    + +A+    EM  KG  P+  T++ +I+GLC++  +  A++L  +
Sbjct: 298 VTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGE 357

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             ++   P    YN++I G C +G + +A  L   M  +  VP+  TY  L+ GL   G 
Sbjct: 358 MKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGR 417

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A E  + + ++  + + + Y+  + G C   R  DA       + RG+    + + I
Sbjct: 418 VSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAI 477

Query: 614 LV 615
           L+
Sbjct: 478 LI 479


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 266/547 (48%), Gaps = 28/547 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           + I+A+ K    D A  VF+ M       NE+ +      LCR    E+A  F   + + 
Sbjct: 248 TFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY 307

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL PD ++YG ++NGL K   L  A A+ DEM   G++ N+V Y  L+DGF K+G    A
Sbjct: 308 GLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEA 367

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +I + ++    V PN + Y+ +I GLCK G+     ++   M K     D+FTY   + 
Sbjct: 368 FDILKEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQ 426

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G  +  + +GA  +  EM  SGI  +  +Y  MI+G C+ G+ KE   L E M  +G   
Sbjct: 427 GHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKP 486

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N   Y  LI G  + G +  A    E + + N + D   +  LI GL             
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST----------- 535

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +A     ++ K G   + +T + L++G+ +   LE A  L ++M   G
Sbjct: 536 -------VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   +Y  L+ G  K   + +  S ++ ML  G KPD   Y ++I  L +S+ +++A 
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  +  + G  PD+ +Y+ LI GLC    +E A+ L   M K    P +V YN L+DG 
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            ++GD  +A  +++ IL + L P+ ++Y   + G C    ++DAF+   + L RGI P  
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768

Query: 609 ITWHILV 615
             +++L 
Sbjct: 769 FVYNVLA 775



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 248/497 (49%), Gaps = 40/497 (8%)

Query: 114 RQFEKAKRF--LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +Q +K   F  LN +   G+ P+VYSYG +INGL ++G+   A  + +EM   G++ N  
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G  K+G+   A E  E++  + +V+P++  YN +I GL   GR +E  E + +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMT-KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++K     D FTY   IHG CK GN+E A+++ R+M+ SG+  +A TY  +++G+ ++  
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608

Query: 292 IKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            ++   + + M G     +   Y I+IR L  +  ++ A  +   + +     D   +  
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK   + KA+ +L+E                  M K G +      N+L++GF +
Sbjct: 669 LISGLCKIADMEKAVGLLDE------------------MAKEGLEPGIVCYNALIDGFCR 710

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  +  A  +F  +  KG  P  V+Y  LI+G CK     +A+   KEML++G  PD   
Sbjct: 711 SGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV 770

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++L  G   +  ++ AL L  +   +G+  +V+++N L+HG C  GK+++  +L   M 
Sbjct: 771 YNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMM 829

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R  VPN  T   ++    K G   +A  ++  + +++                +    +
Sbjct: 830 DREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKK----------------ASQSAT 873

Query: 591 DAFEFL-NDALCRGILP 606
           D F  L  D + +G++P
Sbjct: 874 DRFSLLFTDMINKGLIP 890



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 233/487 (47%), Gaps = 24/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P       +++   K+G +  A  V   M + G+     C N L+    +  D M    +
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR-ADAMEL--L 227

Query: 193 WE-RLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           W+ +  ME   + P+V TY+  I   CK   FD   ++++ M++ +   +  TY   I G
Sbjct: 228 WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           LC++G VE A     EMV+ G+  DA TY A+++G C+  ++KE   L + M   G   N
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V Y  L+ G ++ GK  EA  I + +       +   +  LI GLCK G L +A ++L 
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E                  M K G + + +T N LM G  Q    + A  L  EM   G 
Sbjct: 408 E------------------MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGI 449

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P V SY  +INGLC+     EA + ++EM+ +G KP+   Y+ LI G  +   I +A +
Sbjct: 450 LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACE 509

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              +  +    PD+  YN LI GL + G++E+A + Y+ ++KR  VP+  TY+ L+ G  
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 569

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           KTG+ +KA ++   +L   L+P+  +Y   L+G    +        L   L  G  P   
Sbjct: 570 KTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNH 629

Query: 610 TWHILVR 616
            + I++R
Sbjct: 630 IYGIVIR 636



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 176/357 (49%), Gaps = 19/357 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M  +GI  D  TY+  I+  C+A       +++E M R+ C +N V+YN++I GL  +G 
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           V+EA    E + +   + D+ T+G L+NGLCK                    RL +A +L
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGS------------------RLKEAKAL 335

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           ++ M   G K N     +L++GF++  K   A  + KEM   G  P  + Y+ LI GLCK
Sbjct: 336 LDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           + + G A   +KEM++ G +PD  TY+ L+ G  Q    D A +L  +    G  P+V  
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y I+I+GLC  G+ ++A  L   M      PN   Y  L+ G  K G+   A E    + 
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  + PD+  YN  +KGL +  RM +A E+      RG++P   T+  L+      G
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTG 572



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 195/431 (45%), Gaps = 56/431 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L  +  +GLKP+ + Y  +I G  K G++  A    ++M +  V  +
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           + CYN LI G    G    A+E + + V +  + P+  TY+ +I+G CK G  ++  ++ 
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQ-VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLL 581

Query: 230 DRM--------------------KKNEREK---------------DSFTYCSFIHGLCKA 254
            +M                    K N+ EK               D+  Y   I  L ++
Sbjct: 582 RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 641

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
            N+E A  V  E+ ++G+  D   Y+++I G C+   +++   L + M ++G    +V Y
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G   +G +  A ++++ +  K    +  T+  LI+G CKNG              
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG-------------- 747

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                + DA  L   M   G   +A+  N L  G   A+ LE A+FL +EM  +G +  V
Sbjct: 748 ----DITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NV 802

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             +NTL++G CK  +  E    +  M+++   P+  T   +++   ++ K+  A ++  +
Sbjct: 803 SLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAE 862

Query: 494 FLQKGFTPDVT 504
             QK  +   T
Sbjct: 863 LQQKKASQSAT 873



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 17/305 (5%)

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------EGRL-----ADAA 383
           R ++ +  +    VL++   K G +  A Q++  + + G         G L     ADA 
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAM 224

Query: 384 SLVNR----MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            L+ +    M+  G   + YT ++ +    +A   + A  +F+EM R+ C+   V+YN +
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+GLC+     EA+ F +EM++ G  PD  TY  L+NGLC+  ++  A  L  +    G 
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            P++ +Y  L+ G    GK  +A  +   M      PN + Y+ L+ GL K G   +A +
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +   +++  LRPD  +YN  ++G         AFE LN+    GILP   ++ I++  + 
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464

Query: 620 NNGAS 624
            NG S
Sbjct: 465 QNGES 469


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/581 (29%), Positives = 280/581 (48%), Gaps = 45/581 (7%)

Query: 86  NSMPDKALDVFQRM-NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDV 135
           N++ +   D+FQ + N  + C++             R     KA   +N     G  P V
Sbjct: 108 NTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGV 167

Query: 136 YSYGTVINGLVKSGDLLG-ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            SY  +++ ++++   +  A  +F EM E GV  NV  YNILI GF   G+       + 
Sbjct: 168 LSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFG 227

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +       PNVVTYN +I+  CK  +  E  ++   M       +  +Y   I+GLC+ 
Sbjct: 228 EM-ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G ++    +  EM +     D VT+N +I+G+C  G   +   L   M + G   NVV+Y
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI  + + G ++ A+   + +R++  + +  T+  LI+G  + G+L +A QI+ E+ E
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GR+ DA+ L+  M + G   +  + +++++GF +  +LE 
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L  EM  KG SP V +Y++LI GLCK  R GE     +EML  G  PD +TY+ LIN
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C    +D AL+L  + +QKGF+PD+  YN+LI+G     + ++A +L   +     VP
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586

Query: 537 NLVTYNTLMDGL----FKT------GDCDKAL-----EIWNHILEERLRPDIISYNITLK 581
           N +TYNTL+D      FK+      G C K L      +   +L++  + +   YN+ + 
Sbjct: 587 NEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           G      +  A+    + L  G  P ++T   L +++ + G
Sbjct: 647 GHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/628 (27%), Positives = 301/628 (47%), Gaps = 84/628 (13%)

Query: 36  HSPHLFHHILR------RLIDPKLVVHVSRILE-LIEIQKCYCPEDVALSVIQAYGKNSM 88
           H+PH +  I         L+  K +V++ R  E L  +   + P+  +  ++++   +S+
Sbjct: 4   HNPHYYSSIFTLCSSGDALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSL 63

Query: 89  PDKALDVFQRMNEIFGCEAG-----ILCRKRQFEKAKRF-----LNSLWEKG------LK 132
             K LD + R  + F  +       IL R + ++ A+       +N++ E G      LK
Sbjct: 64  VLKFLD-WARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLK 122

Query: 133 PDVY---SYGTVINGLVKSGDLLG----ALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
              Y   S   V + +VKS   +     AL++ +     G    V+ YN ++D   +   
Sbjct: 123 NSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQ 182

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            ++  E   + ++E+ V PNV TYN++I                                
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILI-------------------------------- 210

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
               G C AGN+E     + EM  +G   + VTYN +ID +C+  KI E F+L  +M  K
Sbjct: 211 ---RGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   N++SYN++I GL   G++ E   I E + ++    D  T   LING C  G  ++A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +  E+ + G                  G L  A   +++M   G   N  T  +L++G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F Q   L+ A  + KEM   G +PT+++YN LING C + R  +A   ++EM+E+G+ PD
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +++YS +I+G C++++++ A +L  + + KG +PDV  Y+ LI GLC   ++ +   L+ 
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      P+ VTY +L++     GD DKAL + + ++++   PDI++YN+ + G    S
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R  +A   L   L    +P  IT++ L+
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 218/448 (48%), Gaps = 34/448 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R+  +A + L  +  KGL P++ SY  VINGL + G +     + +EM +R    + 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LI+G+   G++ +A  +   +V +  + PNVVTY  +IN +CK G  +  +E  D
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  TY + I G  + G ++ A ++ +EMVE+G     +TYNA+I+G C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++   L + M  +G + +VVSY+ +I G   N ++++A  +   +  K  + D  T+ 
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            LI GLCK   L +   +  E+   G                 EG L  A  L + M + 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN----------- 441
           G   +  T N L+NGF + S+ + A  L  ++  +   P  ++YNTLI+           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 442 ----GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
               G C      EA   ++ ML+KG+K +   Y+++I+G  +   I+ A  L  + L  
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL 525
           GF P       L   L   GK  +  QL
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQL 695



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 120/312 (38%), Gaps = 66/312 (21%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIF--GCEAGI---------LCRK 113
           I++ + P+ V+ S +I  + +N   +KA   FQ   E+   G    +         LC++
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKA---FQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+  +       +   GL PD  +Y ++IN     GDL  AL + DEM ++G   ++V Y
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN----------------------- 210
           N+LI+GF K+     AK +  +L+ E SV PN +TYN                       
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCM 615

Query: 211 ---------------------------VMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                                      V+I+G  K G  ++   ++  M  +     S T
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
             +    L   G      ++    ++S    +A     +I    + G +   F + + M 
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735

Query: 304 RKGCLNVVSYNI 315
             G L   S N+
Sbjct: 736 LSGLLPYSSANL 747


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 257/513 (50%), Gaps = 20/513 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR R  + A    N +      P    +  ++  +V+ G    A+++F ++  +G+  ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             + ILI+ +F +     A  +    ++++   PN+VT+N +ING C  G   + L+   
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLAT-ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +       D FTY + I+GL K G ++ A  + +EM +S +  + V Y+A+IDG C+ G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + +   L   +G +G L + V+YN LI G    G+  E   +   +  +N + D  T  
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI+ LCK                  EGR+ +A  ++  M K G K +  T N+LM G+ 
Sbjct: 270 ILIDALCK------------------EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  LF  M ++G  P V++YN LI+G CK +   EA    KE+  K   P + 
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y+ LI+GLC S +I    KL  +       PDV  YNILI  LC  G++ +AL +   M
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMM 431

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K+   PN+VTYN +MDG     + + A +I+N +++  L PDI++YN+ + G C    +
Sbjct: 432 MKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A     +   + ++P   +++ L+  + N G
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 156/507 (30%), Positives = 265/507 (52%), Gaps = 21/507 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA  F  +L  +G   D ++YGT+INGL K+G +  AL +  EM +  V+ N+V Y+ LI
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DG  K G    A  +  + + E  +  + VTYN +I+G C  GR+ E  ++  +M +   
Sbjct: 203 DGLCKDGFVSDALGLCSQ-IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENV 261

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D +T+   I  LCK G +  A+ V   M + G   D VTYNA+++G+C    + E  E
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M ++G   +V++YN+LI G  +   VDEA+ +++ L  KN      ++  LI+GLC
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            +G ++   ++L+E+   G  +  D                  T N L++   +  ++  
Sbjct: 382 NSGRISHVKKLLDEMH--GSAQPPDVV----------------TYNILIDALCKEGRILE 423

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +   M +KG  P +V+YN +++G C       A      M++ G +PD++ Y++LIN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+++ +D A+ L  +   K   PD+  YN LI GLC+ G++    +L   M      P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +++TYN L+D   KT   DKA+ ++  I+E  + PD  + +  +  LC   ++  A + L
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
              L  G  P   T+ IL+ A+  +G+
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 270/552 (48%), Gaps = 28/552 (5%)

Query: 90  DKALDVFQRMNEIFGCEA--------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+  F RM  +F            G + R   +  A      L  KG+ P + ++  +
Sbjct: 37  DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN          A ++   + + G + N+V +N +I+GF   G   +A +  + L+ +  
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           ++ +  TY  +INGL K G+    L +   M+K+  + +   Y + I GLCK G V  A 
Sbjct: 157 LF-DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            +  ++ E GI +DAVTYN++IDG C  G+ +E  +L   M R+    +  ++NILI  L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRL 379
            + G++ EA  +  ++ ++    D  T+  L+ G C    +++A ++ N  V+ G E  +
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 380 ADAASLVN-----RMDKHGCKLNAYTCN-----------SLMNGFIQASKLENAIFLFKE 423
            +   L++     +M      L    CN           SL++G   + ++ +   L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M      P VV+YN LI+ LCK  R  EA   +  M++KG KP+++TY+ +++G C    
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +++A  +  + ++ G  PD+  YN+LI+G C    V++A+ L+  M+ +N +P++ +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DGL   G      E+ + + +    PD+I+YNI L   C       A       +  G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ-IVEG 574

Query: 604 ILPTTITWHILV 615
           I P   T H +V
Sbjct: 575 IWPDFYTNHAIV 586



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 296/633 (46%), Gaps = 47/633 (7%)

Query: 18  PHTALALFD----SATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRIL 61
           P    ++FD    +  R   Y  +  LF  +  + I P +              H +   
Sbjct: 51  PPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAF 110

Query: 62  ELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGIL 110
            L+   ++  Y P  V   ++I  +  N M  KALD  Q +           +G     L
Sbjct: 111 SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            +  Q + A   L  + +  ++P++  Y  +I+GL K G +  AL +  ++ ERG+  + 
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LIDG    G +    ++  ++V E +V P+  T+N++I+ LCK GR  E   +  
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLA 289

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K   + D  TY + + G C   NV  A  ++  MV+ G+  D + YN +IDG+C+  
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   L++ +  K  +  + SYN LI GL  +G++     + + +       D  T+ 
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI+ LCK G + +A+ +L  + + G                    +  A  + NRM K 
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + +    N L+NG+ +   ++ AI LFKEM  K   P + SYN+LI+GLC + R    
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM + G  PD+ITY++L++  C+++  D A+ L  Q ++ G  PD    + ++  
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDN 588

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   K++ A     ++    C PN+ TY  L++ L K G   +A+ + + + +    PD
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            I++ I +  L   +    A +   + + RG++
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 92  ALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A D+F RM +  G E  IL         C+    ++A      +  K L PD+ SY ++I
Sbjct: 459 AKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL   G +     + DEM + G   +V+ YNIL+D F K   + +A  ++ ++V    +
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV--EGI 575

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +P+  T + +++ LCK  +     +    +  +    +  TY   I+ LCK G+   A  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           +  +M ++    DA+T+  +I    +  +  +  +L E M  +G +N+
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNI 683


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 286/592 (48%), Gaps = 45/592 (7%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEI-FGCEAGIL--------CRKRQF-EKAKRFLN 124
            A ++ Q   +NS+ +K    FQ + +  F C +           C    F EKA   ++
Sbjct: 97  TAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVD 156

Query: 125 SLWEKGLKPDVYSYGTVINGLVK-SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
                G  P V SY  +++ +V+    ++ A  V+ EM   GV  NV  YNILI GF   
Sbjct: 157 LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAA 216

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G+       +E +       PNVVTYN +I   CK  R DE  ++   M     E +  T
Sbjct: 217 GNLEMGLRFFEEM-ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   I+GLC+ G +E    V  EM   G   D VTYN +++G+C+ G   +   L   M 
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           R G   +VV+Y  LI  + + G ++ A+  ++ +  +    +  T+  LING  + G+++
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +A +I +E+   G                  GR+ +A  L+  M+  G   +  + ++++
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            GF +  +L+ A  +  EM  KG SP  ++Y++LI GLC+  R  EA    +EML K   
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD  TY+ LING C+   ++ AL L  + ++KGF PD   YN+LI+GL    +  +A +L
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575

Query: 526 YSNMKKRNCVPNLVTYNTLM----DGLFKT------GDCDKAL-----EIWNHILEERLR 570
              +     +PN +TY+TL+    D  FK+      G C K L     +++  +++   +
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P+   YN+ + G C    +  A +   + +  G +P T+T   LV+A+ + G
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 251/520 (48%), Gaps = 43/520 (8%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C+ ++ ++A + L S+  +GL+P++ +Y  VINGL + G +     V  EM  +G  
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            + V YN L++G+ K G++ +A  +   + +   + P+VVTY  +IN +CK G  +  +E
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLPPDVVTYTSLINTMCKAGNLNRAME 364

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +D+M       +  TY S I+G  + G ++ A R++ EM+ SG     VTYNA+++G C
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424

Query: 288 RAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            +G+++E   L   M  KG   +VVSY+ +I G     ++D A  +   + EK  + D+ 
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI GLC+                  + RL +A  L   M       + +T  SL+N
Sbjct: 485 TYSSLIQGLCE------------------QRRLNEACDLFQEMLNKSLLPDEFTYTSLIN 526

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G+ +   L  A+ L  EM +KG  P  V+YN LINGL K  R  EA   + ++      P
Sbjct: 527 GYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIP 586

Query: 467 DMITYSL---------------LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           + ITY                 LI G C    ++ A ++    +++   P+  +YN++IH
Sbjct: 587 NGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIH 646

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G V  A +LY  M     +P+ VT   L+  L+  G  D+ L   N ++ + LR 
Sbjct: 647 GHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQL---NLVIRDILRS 702

Query: 572 DIISYNITLKGLCSCSR----MSDAFEFLNDALCRGILPT 607
             +S     K L   +     +   F  L +    G LP+
Sbjct: 703 CKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 167/553 (30%), Positives = 282/553 (50%), Gaps = 18/553 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC-------- 111
           L L+E ++ + P+ V  + +I    + S+ ++A+D   RM     C   +L         
Sbjct: 30  LSLLEKEE-FVPDTVLYTKMISGLCEASLFEEAMDFLTRMRA-SSCLPNVLTYRILLCGC 87

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K +  + KR L+ +  +G  P    + ++++   +SGD   A  +  +M + G +   
Sbjct: 88  LNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGY 147

Query: 171 VCYNILIDGFFKK----GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           V YNILI G         D +   E     ++E  V  N V  +     LC  G+F++  
Sbjct: 148 VVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAY 207

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M       D+ TY   I  LC A  VE A ++++EM  +GI  D   Y  +ID F
Sbjct: 208 NVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSF 267

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AG I++    ++ M R GC  NVV+Y  LI   L++ KV +A  ++E++  K C  + 
Sbjct: 268 CKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNI 327

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  LI+GLCK G + KA QI  ++ +     + D       +D    + N +T  +L+
Sbjct: 328 VTYTALIDGLCKAGKIEKASQIY-KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  +A +++ A  L K MS +GC P  V Y+ LI+G CK  +  EA      MLE G+ 
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TYS LI+ L + K++D+ALK+  + L+    P+V +Y  +I GLC  GK ++A +L
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              M+++ C PN+VTY  ++DG  K+G  +K LE+   +  +   P+ ++Y + +   CS
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCS 566

Query: 586 CSRMSDAFEFLND 598
              + +A + L +
Sbjct: 567 TGLLDEAHKLLEE 579



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 253/514 (49%), Gaps = 42/514 (8%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC   + EKA +    +   G+ PDVY Y T+I+   K+G +  A   FDEM   G  
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCA 289

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K     +A E++E +++     PN+VTY  +I+GLCK G+ ++  +
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYE-MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348

Query: 228 MWDRMKKN-----------------EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++  MKK                    E + FTY + + GLCKA  V+ A  + + M   
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           G   + V Y+A+IDG C+AGK+ E  E++  M   G   NV +Y+ LI  L ++ ++D A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + +   + E +C  +   +  +I+GLCK G  ++A +++  +EE                
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE---------------- 512

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC  N  T  ++++GF ++ ++E  + L ++MS KGC+P  V+Y  LIN  C     
Sbjct: 513 --KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLL 570

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA+  ++EM +  W   +  Y  +I G   +++   +L L  +  +    P   +Y +L
Sbjct: 571 DEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVL 628

Query: 510 IHGLCSAGKVEDALQLYSNMKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           I     AG++E AL+L   +   +     N   + TL++ L      DKA E++  ++  
Sbjct: 629 IDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISR 688

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
              P++      +KGL   +R  +A + L D++C
Sbjct: 689 GSIPELSILVHLIKGLLRVNRWEEALQLL-DSIC 721



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 249/536 (46%), Gaps = 42/536 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    FE+A  FL  +      P+V +Y  ++ G +    L     +   M   G   +
Sbjct: 52  LCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPS 111

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR-----FDE 224
              +N L+  + + GDY  A ++ +++V +    P  V YN++I G+C          D 
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMV-QCGCQPGYVVYNILIGGICSSEEPGKDVLDL 170

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             + +  M +     +     +F   LC  G  E A  V REM+  G   D  TY+ +I 
Sbjct: 171 AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C A K+++ F+L++ M R G   +V  Y  LI    + G +++A + ++ +    C  
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI+   K+  ++KA    NEV E               M   GC  N  T  +
Sbjct: 291 NVVTYTALIHAYLKSRKVSKA----NEVYE--------------MMLSKGCTPNIVTYTA 332

Query: 404 LMNGFIQASKLENAIFLFKEMSRK---------------GCS--PTVVSYNTLINGLCKV 446
           L++G  +A K+E A  ++K M ++               G S  P V +Y  L++GLCK 
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA   +K M  +G +P+ + Y  LI+G C++ K+D A ++    L+ G+ P+V  Y
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           + LI  L    +++ AL++ S M + +C PN+V Y  ++DGL K G  D+A ++   + E
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +   P++++Y   + G     R+    E L     +G  P  +T+ +L+    + G
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 60/366 (16%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M   G  +D  T        C++GK +E   L E    +   + V Y  +I GL E    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE--KEEFVPDTVLYTKMISGLCEASLF 58

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           +EA+     +R  +C  +  T+ +L   LC  G LNK              +L     ++
Sbjct: 59  EEAMDFLTRMRASSCLPNVLTYRIL---LC--GCLNKE-------------KLGRCKRIL 100

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M   GC  +    NSL++ + ++     A  L K+M + GC P  V YN LI G+C  
Sbjct: 101 SMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSS 160

Query: 447 E----------------------------------------RFGEAYSFVKEMLEKGWKP 466
           E                                        +F +AY+ ++EM+ KG+ P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D  TYS +I  LC + K++ A +L  +  + G  PDV +Y  LI   C AG +E A   +
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M++  C PN+VTY  L+    K+    KA E++  +L +   P+I++Y   + GLC  
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340

Query: 587 SRMSDA 592
            ++  A
Sbjct: 341 GKIEKA 346



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 3/160 (1%)

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G++ D  T     + LC+S K   AL L     ++ F PD  +Y  +I GLC A  
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASL 57

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            E+A+   + M+  +C+PN++TY  L+ G        +   I + ++ E   P    +N 
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +   C     + A++ L   +  G  P  + ++IL+  +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI 157



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+  D        H LC +GK  +AL L   ++K   VP+ V Y  ++ GL +    ++A
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEA 61

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           ++    +      P++++Y I L G  +  ++      L+  +  G  P+   ++ LV A
Sbjct: 62  MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHA 121

Query: 618 VMNNG 622
              +G
Sbjct: 122 YCRSG 126


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/566 (29%), Positives = 296/566 (52%), Gaps = 21/566 (3%)

Query: 57  VSRILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---- 110
           V+R+L  +E        DV +  ++I +  KN +   A D++  M  + G    ++    
Sbjct: 187 VARLLRKLEGHSV--KPDVVMYNTIIHSLCKNKLLGDACDLYSEM-IVKGISPNVVTYNA 243

Query: 111 -----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
                C     ++A   LN +  K + PDV ++ T+I+ L K G +  A  V   M +  
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC 303

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           ++ +VV YN LIDG+F       AK ++  +  ++ V PNV TY  MI+GLCK    DE 
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA-QSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           + +++ MK      D  TY S I GLCK  ++E A  + ++M E GI  D  +Y  ++D 
Sbjct: 363 MSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G+++   E ++ +  KG  LNV +YN++I GL +     EA+ +   +  K C  D
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 345 STTHGVLINGLCKNGYLNKAIQILNE-----VEEGGEGRLADAASLVNRMDKHGCKLNAY 399
           + T   +I  L +    +KA +IL E     ++E  + RL +A  ++  M K   K +  
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVV 542

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  +LM+G+   ++L++A ++F  M++ G +P V  Y  +I+GLCK +   EA S  +EM
Sbjct: 543 TYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEM 602

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             K   P+++TY+ LI+ LC++  ++ A+ L  +  + G  PDV  Y IL+ GLC +G++
Sbjct: 603 KHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRL 662

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E A +++  +  +    N+  Y  +++ L K G  D+AL++   + ++   PD ++++I 
Sbjct: 663 EGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDII 722

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGIL 605
           +  L        A + L + + RG++
Sbjct: 723 IWALFEKDENDKAEKILXEMIARGLM 748



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 261/537 (48%), Gaps = 43/537 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + +KA  F + +  +G + +  SY T+INGL K+G+      +  ++    V+ +
Sbjct: 143 LCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPD 202

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I    K      A +++  ++++  + PNVVTYN ++ G C  G   E   + 
Sbjct: 203 VVMYNTIIHSLCKNKLLGDACDLYSEMIVK-GISPNVVTYNALVYGFCIMGHLKEAFSLL 261

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D  T+ + I  L K G ++ A+ V   M+++ I  D VTYN++IDG+   
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+K    ++  M + G   NV +Y  +I GL +   VDEA+S++E ++ KN   D  T+
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCKN +L +AI                  +L  +M + G + + Y+   L++  
Sbjct: 382 TSLIDGLCKNHHLERAI------------------ALCKKMKEQGIQPDVYSYTILLDAL 423

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +LENA   F+ +  KG    V +YN +INGLCK + FGEA     +M  KG  PD 
Sbjct: 424 CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDA 483

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-----------------------PDVTM 505
           IT+  +I  L +  + D A K+  + + +G                         PDV  
Sbjct: 484 ITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVT 543

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  L+ G     +++ A  ++ +M +    PN+  Y  ++DGL K    D+A+ ++  + 
Sbjct: 544 YGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMK 603

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + + P+I++Y   +  LC    +  A   L +    GI P   ++ IL+  +  +G
Sbjct: 604 HKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSG 660



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 238/473 (50%), Gaps = 20/473 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P  + +  +++ LV +      +++F +    G   ++   NIL++ F        A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
               +++   +PN +T N +I GLC  G   + L   D++     + +  +Y + I+GLC
Sbjct: 121 LAN-ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC 179

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G  +   R+ R++    +  D V YN +I   C+   + +  +L+  M  KG   NVV
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN L+ G    G + EA S+   ++ KN N D  T   LI+ L                
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDAL---------------- 283

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
             G EG++  A  ++  M K   K +  T NSL++G+   +K++NA ++F  M++ G +P
Sbjct: 284 --GKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP 341

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V +Y T+I+GLCK +   EA S  +EM  K   PD++TY+ LI+GLC++  ++ A+ LC
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALC 401

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  ++G  PDV  Y IL+  LC  G++E+A + +  +  +    N+ TYN +++GL K 
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
               +A+++ + +  +   PD I++   +  L        A + L + + RG+
Sbjct: 462 DLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 250/530 (47%), Gaps = 43/530 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   + +             G  PD+ +   ++N       +  A +V   + +RG   N
Sbjct: 73  LVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPN 132

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            +  N LI G   +G+  +A    +++V +     N V+Y  +INGLCK G       + 
Sbjct: 133 AITLNTLIKGLCFRGEIKKALYFHDQVVAQ-GFQLNQVSYRTLINGLCKTGETKAVARLL 191

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +++ +  + D   Y + IH LCK   +  A  +Y EM+  GI  + VTYNA++ GFC  
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +KE F L   M  K    +V ++N LI  L + GK+  A  +  ++ +     D  T+
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G     +LNK               + +A  +   M + G   N  T  ++++G 
Sbjct: 312 NSLIDGYF---FLNK---------------VKNAKYVFYSMAQSGVTPNVRTYTTMIDGL 353

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ LF+EM  K   P +V+Y +LI+GLCK      A +  K+M E+G +PD+
Sbjct: 354 CKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 413

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +Y++L++ LC+  +++ A +   + L KG+  +V  YN++I+GLC A    +A+ L S 
Sbjct: 414 YSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL-----EER--------------- 568
           M+ + C+P+ +T+ T++  LF+  + DKA +I   ++     E R               
Sbjct: 474 MEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMT 533

Query: 569 ---LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              ++PD+++Y   + G    + +  A          G+ P    + I++
Sbjct: 534 KACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 197/416 (47%), Gaps = 19/416 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    +N +++ L     +   + ++ + + N    D  T    ++  C   ++  A  V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLE 322
              +++ G   +A+T N +I G C  G+IK+      +V+ +   LN VSY  LI GL +
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+      +   L   +   D   +  +I+ LCKN  L                   DA
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL------------------GDA 222

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G   N  T N+L+ GF     L+ A  L  EM  K  +P V ++NTLI+ 
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +   A   +  M++   KPD++TY+ LI+G     K+  A  +     Q G TP+
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  Y  +I GLC    V++A+ L+  MK +N +P++VTY +L+DGL K    ++A+ +  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            + E+ ++PD+ SY I L  LC   R+ +A EF    L +G      T+++++  +
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 17/326 (5%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +N ++  L+ N      IS+++         D  T  +L+N  C   ++  A  +L  + 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           + G                  G +  A    +++   G +LN  +  +L+NG  +  + +
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
               L +++      P VV YNT+I+ LCK +  G+A     EM+ KG  P+++TY+ L+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G C    +  A  L  +   K   PDV  +N LI  L   GK++ A  + + M K    
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P++VTYN+L+DG F       A  ++  + +  + P++ +Y   + GLC    + +A   
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365

Query: 596 LNDALCRGILPTTITWHILVRAVMNN 621
             +   + ++P  +T+  L+  +  N
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKN 391



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 114/221 (51%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N +++  +        I LFK+    G +P + + N L+N  C +     A+S +  +L+
Sbjct: 67  NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK 126

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G+ P+ IT + LI GLC   +I  AL    Q + +GF  +   Y  LI+GLC  G+ + 
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKA 186

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
             +L   ++  +  P++V YNT++  L K      A ++++ ++ + + P++++YN  + 
Sbjct: 187 VARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           G C    + +AF  LN+   + I P   T++ L+ A+   G
Sbjct: 247 GFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%)

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+  F  M      P    +N +++ L   + +    S  K+    G  PD+ T ++L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C    I  A  +    L++G+ P+    N LI GLC  G+++ AL  +  +  +    
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N V+Y TL++GL KTG+      +   +    ++PD++ YN  +  LC    + DA +  
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 597 NDALCRGILPTTITWHILV 615
           ++ + +GI P  +T++ LV
Sbjct: 227 SEMIVKGISPNVVTYNALV 245



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 50/124 (40%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P    +N ++  L +       + L+   +     P+L T N LM+          A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             +IL+    P+ I+ N  +KGLC    +  A  F +  + +G     +++  L+  +  
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 621 NGAS 624
            G +
Sbjct: 181 TGET 184


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 257/513 (50%), Gaps = 20/513 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR R  + A    N +      P    +  ++  +V+ G    A+++F ++  +G+  ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             + ILI+ +F +     A  +    ++++   PN+VT+N +ING C  G   + L+   
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLAT-ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +       D FTY + I+GL K G ++ A  + +EM +S +  + V Y+A+IDG C+ G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + +   L   +G +G L + V+YN LI G    G+  E   +   +  +N + D  T  
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI+ LCK                  EGR+ +A  ++  M K G K +  T N+LM G+ 
Sbjct: 270 ILIDALCK------------------EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  LF  M ++G  P V++YN LI+G CK +   EA    KE+  K   P + 
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y+ LI+GLC S +I    KL  +       PDV  YNILI  LC  G++ +AL +   M
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMM 431

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K+   PN+VTYN +MDG     + + A +I+N +++  L PDI++YN+ + G C    +
Sbjct: 432 MKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A     +   + ++P   +++ L+  + N G
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/507 (30%), Positives = 265/507 (52%), Gaps = 21/507 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA  F  +L  +G   D ++YGT+INGL K+G +  AL +  EM +  V+ N+V Y+ LI
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DG  K G    A  +  + + E  +  + VTYN +I+G C  GR+ E  ++  +M +   
Sbjct: 203 DGLCKDGFVSDALGLCSQ-IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENV 261

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D +T+   I  LCK G +  A+ V   M + G   D VTYNA+++G+C    + E  E
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M ++G   +V++YN+LI G  +   VDEA+ +++ L  KN      ++  LI+GLC
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            +G ++   ++L+E+   G  +  D                  T N L++   +  ++  
Sbjct: 382 NSGRISHVKKLLDEMH--GSAQPPDVV----------------TYNILIDALCKEGRILE 423

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +   M +KG  P +V+YN +++G C       A      M++ G +PD++ Y++LIN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+++ +D A+ L  +   K   PD+  YN LI GLC+ G++    +L   M      P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +++TYN L+D   KT   DKA+ ++  I+E  + PD  + +  +  LC   ++  A + L
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
              L  G  P   T+ IL+ A+  +G+
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 270/552 (48%), Gaps = 28/552 (5%)

Query: 90  DKALDVFQRMNEIFGCEA--------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+  F RM  +F            G + R   +  A      L  KG+ P + ++  +
Sbjct: 37  DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN          A ++   + + G + N+V +N +I+GF   G   +A +  + L+ +  
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           ++ +  TY  +INGL K G+    L +   M+K+  + +   Y + I GLCK G V  A 
Sbjct: 157 LF-DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            +  ++ E GI +DAVTYN++IDG C  G+ +E  +L   M R+    +  ++NILI  L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRL 379
            + G++ EA  +  ++ ++    D  T+  L+ G C    +++A ++ N  V+ G E  +
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 380 ADAASLVN-----RMDKHGCKLNAYTCN-----------SLMNGFIQASKLENAIFLFKE 423
            +   L++     +M      L    CN           SL++G   + ++ +   L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M      P VV+YN LI+ LCK  R  EA   +  M++KG KP+++TY+ +++G C    
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +++A  +  + ++ G  PD+  YN+LI+G C    V++A+ L+  M+ +N +P++ +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DGL   G      E+ + + +    PD+I+YNI L   C       A       +  G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ-IVEG 574

Query: 604 ILPTTITWHILV 615
           I P   T H +V
Sbjct: 575 IWPDFYTNHAIV 586



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 296/633 (46%), Gaps = 47/633 (7%)

Query: 18  PHTALALFD----SATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRIL 61
           P    ++FD    +  R   Y  +  LF  +  + I P +              H +   
Sbjct: 51  PPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAF 110

Query: 62  ELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGIL 110
            L+   ++  Y P  V   ++I  +  N M  KALD  Q +           +G     L
Sbjct: 111 SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            +  Q + A   L  + +  ++P++  Y  +I+GL K G +  AL +  ++ ERG+  + 
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LIDG    G +    ++  ++V E +V P+  T+N++I+ LCK GR  E   +  
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLA 289

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K   + D  TY + + G C   NV  A  ++  MV+ G+  D + YN +IDG+C+  
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   L++ +  K  +  + SYN LI GL  +G++     + + +       D  T+ 
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI+ LCK G + +A+ +L  + + G                    +  A  + NRM K 
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + +    N L+NG+ +   ++ AI LFKEM  K   P + SYN+LI+GLC + R    
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM + G  PD+ITY++L++  C+++  D A+ L  Q ++ G  PD    + ++  
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDN 588

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   K++ A     ++    C PN+ TY  L++ L K G   +A+ + + + +    PD
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            I++ I +  L   +    A +   + + RG++
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 92  ALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A D+F RM +  G E  IL         C+    ++A      +  K L PD+ SY ++I
Sbjct: 459 AKDIFNRMVK-SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL   G +     + DEM + G   +V+ YNIL+D F K   + +A  ++ ++V    +
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV--EGI 575

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +P+  T + +++ LCK  +     +    +  +    +  TY   I+ LCK G+   A  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           +  +M ++    DA+T+  +I    +  +  +  +L E M  +G +N+
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNI 683


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 263/510 (51%), Gaps = 20/510 (3%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +  +A     S+ +    P +  +  + + + +  +    L    EM   G+E N+   N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I+I+ F +K   + A  +  R  ++    PN +T++ +ING C  GR  E + + DRM +
Sbjct: 109 IMINCFCRKRKLLFAFSVVGR-ALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +   +  T  + I+GLC  G V  A  +   MV+ G   + +TY  +++  C++G    
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L+  M  +    +VV Y+I+I  L ++G +D+A+S++  +  K   AD   +  +I 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GLC                   +GR  D A ++  M       N  T ++L++ F++  K
Sbjct: 288 GLCN------------------DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L  A  L+ EM  +G +P  ++Y++LI+G CK  R GEA   +  M+ KG +P+++TYS+
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C++K++D  ++L C+   KG   D   YN L+ G C +GK+  A +L+  M  R 
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P++VTY  L+DGL   G+  KALEI+  + + R+   I  YNI + G+C+ S++ DA+
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGA 623
                   +G+ P  +T+++++  +   G+
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 271/537 (50%), Gaps = 28/537 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++A+D+F+ M +         F      + R+++++    F   +   G++ ++Y+   +
Sbjct: 51  NEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIM 110

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   LL A +V     + G E N + ++ LI+GF  +G    A  + +R+V E  
Sbjct: 111 INCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV-EMK 169

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVT N +INGLC  GR  E L + DRM K   E +  TY   ++ +CK+GN   A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++R+M E  I    V Y+ +ID  C+ G + +   L+  M  KG   +VV+Y+ +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
             +G+ D+   +   +  +N   +  T   LI+   K                  EG+L 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK------------------EGKLL 331

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L N M   G   +  T +SL++GF + ++L  A  +   M  KGC P +V+Y+ LI
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N  CK +R         E+  KG   D +TY+ L+ G CQS K+++A +L  + + +G  
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P V  Y IL+ GLC  G+++ AL+++  M+K   +  +  YN ++ G+      D A  +
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL 511

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +  +  + ++PD+++YN+ + GLC    +S+A          G  P+  T++IL+RA
Sbjct: 512 FCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 171/359 (47%), Gaps = 52/359 (14%)

Query: 311 VSYNILIRGLLENGKVDEAISIWELL--------------------------------RE 338
           VSY   +R  + + KV+EAI ++E +                                +E
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 339 KNCNA---DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
            + N    +  T  ++IN  C+   L  A  ++    + G                 EGR
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           +++A +LV+RM +   + N  T N+L+NG     ++  A+ L   M + GC    ++Y  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           ++N +CK      A    ++M E+  K  ++ YS++I+ LC+   +D AL L  +   KG
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
              DV  Y+ +I GLC+ G+ +D  ++   M  RN +PN+VT++ L+D   K G   +A 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           E++N ++   + PD I+Y+  + G C  +R+ +A + L+  + +G  P  +T+ IL+ +
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 31/322 (9%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  AL D   +E     +  L++ ++ R I P  + + S I         +C E+  
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLI-------DGFCKEN-- 363

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLW 127
                   +    ++ LD+        GCE  I+         C+ ++ +   R    + 
Sbjct: 364 --------RLGEANQMLDLMVSK----GCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            KGL  D  +Y T++ G  +SG L  A  +F EM  RGV  +VV Y IL+DG    G+  
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +A EI+E++  ++ +   +  YN++I+G+C   + D+   ++  +     + D  TY   
Sbjct: 472 KALEIFEKM-QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVM 530

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I GLCK G++  A+ ++R+M E G      TYN +I        +    EL E M  +G 
Sbjct: 531 IGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGF 590

Query: 308 LNVVSYNILIRGLLENGKVDEA 329
               S   ++  +L +G++D+ 
Sbjct: 591 AADASTIKMVVVMLSDGRLDKT 612



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 36/254 (14%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L NG +   K+  AI LF+ M +    P+++ ++ L + + + + +     F KEM   G
Sbjct: 41  LRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNG 99

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + +M T +++IN  C+ +K+  A  +  + L+ GF P+   ++ LI+G C  G+V +A+
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGL----------------------------------- 548
            L   M +    PN+VT NTL++GL                                   
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+G+   AL+++  + E  ++  ++ Y+I +  LC    + DA    N+   +GI    
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279

Query: 609 ITWHILVRAVMNNG 622
           + +  ++  + N+G
Sbjct: 280 VAYSSIIGGLCNDG 293



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 430 SPTVVSYNT-LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           S   VSY   L NG+  + +  EA    + M++    P +I +S L + + + K+ D+ L
Sbjct: 31  SEAKVSYKERLRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             C +    G   ++   NI+I+  C   K+  A  +     K    PN +T++TL++G 
Sbjct: 90  GFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF 149

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G   +A+ + + ++E + RP++++ N  + GLC   R+++A   ++  +  G     
Sbjct: 150 CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANE 209

Query: 609 ITW 611
           IT+
Sbjct: 210 ITY 212


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 280/542 (51%), Gaps = 31/542 (5%)

Query: 88  MPDKALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           + D+ L+V  RMN +F C A I   C+  Q  +A+R L  + +  L+P+ YSY T+++G 
Sbjct: 346 LRDEMLNVGLRMN-LFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGF 404

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            + G +  A++V++EM   G+++NVV +N L+ G  + G +  A  +W  L+++  V P+
Sbjct: 405 CREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWH-LMLKRGVTPD 463

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
            V+Y  +++ L K G F   L +W+ +      + ++ + + I+G CK   +  AE  + 
Sbjct: 464 EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFN 523

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENG 324
            M E G   D VTY  +IDG+C+ G ++E F++ E M ++  L  +  YN LI GL ++ 
Sbjct: 524 RMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           K  E + +   +  K  + +  T+G LI G C                   EGRL  A +
Sbjct: 584 KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCD------------------EGRLDKAFT 625

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
               M + G   N   C+ +++   +  +++ A  L ++M     +  V   +   + L 
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM----VNLDVFLDHGYFDRLH 681

Query: 445 KVERFGEAYSFVKEMLEKGWK----PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           K +        + + L++  K    P+ + Y++ I GLC+S K+D A K+    L +GF+
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD   Y  LIHG  +AG V DA  L   M KR   PN++TYN L++GL K+G+ D+A ++
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ +  + L P++ISYNI + G C      +A +  N  L  GI P+ IT+  L+     
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861

Query: 621 NG 622
            G
Sbjct: 862 QG 863



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 293/617 (47%), Gaps = 35/617 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           LLK + NP  +L  F  A+++  +   P++  H          +VH+     + +  + Y
Sbjct: 67  LLKLKFNPIASLHFFKLASKQSNF--RPNVNSHCK--------LVHILSRARMYDETRSY 116

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMN---EIFGCEAGILCRKRQFEKAKRFLNSLW 127
             E V  S    Y    + ++ + VF+       +F     I C K   + A    +++ 
Sbjct: 117 LNELVTPSK-NNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMG 175

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + G  P + S   +++ LV+ G+   A+ V+D +   G+  +V   +I+++ + K G ++
Sbjct: 176 KLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDG-WV 234

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
                + + +       NVVTYN +I+G    G  +    +   M +    ++  T    
Sbjct: 235 NVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLL 294

Query: 248 IHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           I G C+   +E AE+V REM  S G+ +D   Y  +IDG+CR  K+ +   L + M   G
Sbjct: 295 IKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVG 354

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
             +N+   N LI G  +NG+V EA  +   + + +   +S ++  L++G C+ G + KAI
Sbjct: 355 LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAI 414

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            + NE                  M + G + N  T NSL+ G  +    E+A+ ++  M 
Sbjct: 415 SVYNE------------------MLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLML 456

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++G +P  VSY TL++ L K+  F  A +   ++L +G+      ++ +ING C+ +K+ 
Sbjct: 457 KRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMI 516

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +   +  + GF PD   Y  LI G C  G VE+A ++   M+K   +P++  YN+L+
Sbjct: 517 EAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLI 576

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GLFK+    + +++ + +  + L P++++Y   + G C   R+  AF    D + +G  
Sbjct: 577 GGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFA 636

Query: 606 PTTITWHILVRAVMNNG 622
           P  I    +V ++   G
Sbjct: 637 PNVIICSKIVSSLYRLG 653



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 237/539 (43%), Gaps = 101/539 (18%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           PE  + S ++  + +  +  KA+ V+  M  + G ++ +         LCR   FE A  
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRV-GIQSNVVTHNSLLKGLCRVGAFEDALH 450

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
             + + ++G+ PD  SY T+++ L K G+   ALA+++++  RG   +   +N +I+GF 
Sbjct: 451 VWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFC 510

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK------- 234
           K    + A+E + R+  E    P+ VTY  +I+G CK G  +E  ++ ++M+K       
Sbjct: 511 KMEKMIEAEETFNRM-KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSI 569

Query: 235 --------------NERE--------------KDSFTYCSFIHGLCKAGNVEGAERVYRE 266
                           RE               +  TY + I G C  G ++ A   Y +
Sbjct: 570 ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFD 629

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-----------------GRKGCL- 308
           M+E G   + +  + ++    R G+I E   L + M                    G L 
Sbjct: 630 MIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLD 689

Query: 309 ------------------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
                             N V YNI I GL ++GKVD+A  I+  L  +  + D+ T+  
Sbjct: 690 SQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCT 749

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G    G +N                  DA SL + M K G   N  T N+L+NG  +
Sbjct: 750 LIHGYSAAGNVN------------------DAFSLRDEMLKRGLAPNIITYNALINGLCK 791

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  L+ A  LF ++  KG +P V+SYN LI+G CK     EA     +ML++G  P +IT
Sbjct: 792 SGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLIT 851

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           YS LI G C+   +  A  L  +  +     ++  +  L+ G    G+V+   +L++ M
Sbjct: 852 YSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           +G + +A  + + M K GC  +  +CN L++  ++  +  NAI ++  ++R G  P V +
Sbjct: 161 KGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFT 220

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS----KKIDMALKLC 491
            + ++N  CK      A  FVKEM   G++ +++TY+ LI+G C S    ++ +M LKL 
Sbjct: 221 CSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDG-CVSIGDMERAEMVLKLM 279

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-RNCVPNLVTYNTLMDGLFK 550
            +   +G   +     +LI G C   K+E+A ++   M++    V +   Y  L+DG  +
Sbjct: 280 GE---RGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCR 336

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               D A+ + + +L   LR ++   N  + G C   ++S+A   L   +   + P + +
Sbjct: 337 VCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYS 396

Query: 611 WHILVRAVMNNGAST 625
           +  L+      G  T
Sbjct: 397 YSTLMDGFCREGLVT 411


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 307/615 (49%), Gaps = 59/615 (9%)

Query: 51  PKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL 110
           P+ V HVS ++ LI I       D+A S  Q++ ++ +P     V+     ++       
Sbjct: 74  PQEVSHVS-LIALIRILAKSGLSDLAFSQFQSF-RSQVPANPPPVY-----LYNMVLESS 126

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            R+ + +        +   G+ P+ Y+   +I GL  SG    A  VFD+M  +G   N 
Sbjct: 127 LREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNE 186

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             + IL+ G+ + G  MRA E+ + +     V PN V YN +I+  C+ GR +E   + +
Sbjct: 187 FSFGILVRGYCRAGLSMRALELLDGM-GSFGVQPNKVIYNTLISSFCREGRNEEAERLVE 245

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV---ESGI-FVDAVTYNAMIDGF 286
           RM+++    D  T+ S I  LC AG +  A R++R+M    E G+   +  T+N M++GF
Sbjct: 246 RMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGF 305

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G ++E   L E M R G L  + SYNI + GL+ NGK+ EA    + + +K    + 
Sbjct: 306 CKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNI 365

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            +   +++GLCKNG ++ A  I+  +   G                  G++  A ++++ 
Sbjct: 366 YSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHE 425

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M + GC  N YTCN L++   +  ++  A  L ++M+ +      V+ N +I+GLCK  +
Sbjct: 426 MMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGK 485

Query: 449 FGEAYSFVKEMLEKGWK-----------------------PDMITYSLLINGLCQSKKID 485
             EA   V+ M   G                         PD+ITYS++INGLC++ ++D
Sbjct: 486 LDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLD 545

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A K   + + K   PD  +Y+  IH  C  GK+  A ++  +M+KR C  +L TYN+L+
Sbjct: 546 EARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLI 605

Query: 546 DGLFKTGDCDKALEIW---NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            GL   G  ++  EI+   + + E+ + P+I +YN  +  LC   R+ DA   L++ L +
Sbjct: 606 LGL---GSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQK 662

Query: 603 GILPTTITWHILVRA 617
           GI P   ++ +L++A
Sbjct: 663 GISPNISSFRLLIKA 677



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 260/536 (48%), Gaps = 46/536 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +FE A+   + +  KG +P+ +S+G ++ G  ++G  + AL + D M   GV+ N
Sbjct: 161 LCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPN 220

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI  F ++G    A+ + ER+  E  ++P+VVT+N  I+ LC  G+  E   ++
Sbjct: 221 KVIYNTLISSFCREGRNEEAERLVERM-REDGLFPDVVTFNSRISALCSAGKILEASRIF 279

Query: 230 DRMKKNER----EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             M+ +E       +  T+   + G CK G +E A+ +   M  +G  ++  +YN  + G
Sbjct: 280 RDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLG 339

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
             R GK+ E     + M  KG   N+ S+N ++ GL +NG + +A  I  L+       D
Sbjct: 340 LVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPD 399

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVN 387
           + T+  L++G C  G + KA  IL+E+   G                 EGR+ +A  L+ 
Sbjct: 400 TVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQ 459

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM----------------------- 424
           +M++    L+  TCN +++G  ++ KL+ A+ + + M                       
Sbjct: 460 KMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSS 519

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           + K C P +++Y+ +INGLCK  R  EA     EM+ K   PD I Y   I+  C+  KI
Sbjct: 520 NGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKI 579

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             A ++     ++G    +  YN LI GL S  ++ +   L  +MK++   PN+ TYN +
Sbjct: 580 SSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNM 639

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           +  L + G    A  + + +L++ + P+I S+ + +K  C  S      E    AL
Sbjct: 640 ISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIAL 695



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 248/514 (48%), Gaps = 51/514 (9%)

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETN---VVCYNILIDGFFKKGDYMRAKEIWERL 196
            +I  L KSG    A + F + F   V  N   V  YN++++   ++        +++ +
Sbjct: 84  ALIRILAKSGLSDLAFSQF-QSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDM 142

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V+   V P   T N++I GLC  GRF++  E++D+M       + F++   + G C+AG 
Sbjct: 143 VV-AGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGL 201

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
              A  +   M   G+  + V YN +I  FCR G+ +E   L E M   G   +VV++N 
Sbjct: 202 SMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNS 261

Query: 316 LIRGLLENGKVDEAISIWELLREKN----CNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            I  L   GK+ EA  I+  ++          + TT  +++ G CK              
Sbjct: 262 RISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCK-------------- 307

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG L +A +LV  M ++G  +   + N  + G ++  KL  A    KEM  KG  P
Sbjct: 308 ----EGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEP 363

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            + S+NT+++GLCK     +A   +  M+  G  PD +TYS L++G C + K+  A  + 
Sbjct: 364 NIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNIL 423

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +++G +P+    NIL+H L   G++ +A +L   M +R+   + VT N ++DGL K+
Sbjct: 424 HEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483

Query: 552 GDCDKALEI----WNH--------------ILE-----ERLRPDIISYNITLKGLCSCSR 588
           G  D+A+EI    W H              +++     ++  PD+I+Y+I + GLC   R
Sbjct: 484 GKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGR 543

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +A +   + + + + P +I +   + +   +G
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHG 577



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 266/602 (44%), Gaps = 85/602 (14%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
            L  S  RE     +  L   +    + P +V   SRI  L    K      +    +Q 
Sbjct: 226 TLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRI-FRDMQI 284

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
             +  +P   +  F  M E F       C++   E+AK  + S+   G   ++ SY   +
Sbjct: 285 DEELGLPRPNITTFNLMLEGF-------CKEGMLEEAKTLVESMKRNGNLMELESYNIWL 337

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            GLV++G LL A     EM ++G+E N+  +N ++DG  K G    A+ I   L++ + +
Sbjct: 338 LGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMG-LMISSGI 396

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ VTY+ +++G C  G+  +   +   M +     +++T    +H L K G +  AE+
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-------------------- 302
           + ++M E    +D VT N +IDG C++GK+ E  E+ E M                    
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 303 ----GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
               G+K   ++++Y+I+I GL + G++DEA   +  +  K+ + DS  +   I+  CK+
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G ++ A ++L +                  M+K GC  +  T NSL+ G    +++    
Sbjct: 577 GKISSAFRVLKD------------------MEKRGCNKSLQTYNSLILGLGSKNQIFEIY 618

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M  KG +P + +YN +I+ LC+  R  +A S + EML+KG  P++ ++ LLI   
Sbjct: 619 GLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAF 678

Query: 479 CQSKKI-------DMALKLCCQ---------------------------FLQKGFTPDVT 504
           C++          ++AL +C                              L + F     
Sbjct: 679 CKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNF 738

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN LI  LC    +E+A  +   M  +    +  ++  ++DGL K G    A E+   +
Sbjct: 739 QYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798

Query: 565 LE 566
           ++
Sbjct: 799 MD 800



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 2/118 (1%)

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCV--PNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           LI  L  +G  + A   + + + +     P +  YN +++   +    D    ++  ++ 
Sbjct: 85  LIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVV 144

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             + P+  + N+ + GLC   R  DA E  +    +G  P   ++ ILVR     G S
Sbjct: 145 AGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLS 202


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 274/530 (51%), Gaps = 25/530 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + + A+R + S+    + PD Y+Y  +I GL   G +  ALA+ D+M +RG + +V
Sbjct: 120 CRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSV 176

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y +L++   K   +  A  + + +  +    PN+VTYNV+ING+C+ GR D+  E+ +
Sbjct: 177 VTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAKEILN 235

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           R+     + D  +Y + + GLC A   +  + ++ EMV+     + VT++ ++  FCR G
Sbjct: 236 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 295

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   ++ + M + GC  N    NI+I  + + G+VD+A      +    CN D+ ++ 
Sbjct: 296 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 355

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            ++ GLC+ G    A ++L E+                     +G +  A  L+  M ++
Sbjct: 356 TVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY 415

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC +   T N+L++GF    ++++A+ LF  +    C P  ++Y TL+ GLC  ER   A
Sbjct: 416 GCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAA 472

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              +  M++K    + +T+++L++  CQ   ++ A++L  Q ++ G TP++  +N L+ G
Sbjct: 473 AELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           +      E+AL+L   +  +    + +TY++++D L +    ++A+++ + + +  +RP 
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  YN  L  LC       A +F    +  G +P   T+ IL+  + + G
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 642



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 259/531 (48%), Gaps = 40/531 (7%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDK 91
            Y ++P     I+R L D   V     +L+ +  + C  P  V  +V+ +A  K+S   +
Sbjct: 141 AYTYTP-----IIRGLCDRGRVGDALALLDDMLQRGCQ-PSVVTYTVLLEAVCKSSGFGE 194

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A++V   M    GC   I         +CR+ + + AK  LN L   G +PD+ SY TV+
Sbjct: 195 AMNVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            GL  +        +F EM ++    N V +++L+  F + G   RA ++ +++  +   
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM-SQHGC 312

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN    N++IN +CK GR D+  +  + M       D+ +Y + + GLC+AG  E A+ 
Sbjct: 313 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +  EMV      + VT+N  I   C+ G I++  +L E+M   GC + +V+YN L+ G  
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G+VD A+   EL     C  ++ T+  L+ GLC                     RL  
Sbjct: 433 VQGRVDSAL---ELFNNLPCEPNTITYTTLLTGLCH------------------AERLDA 471

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           AA L+  M +  C LNA T N L++ F Q   +E A+ L  +M   GC+P ++++NTL++
Sbjct: 472 AAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 531

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G+ K     EA   +  ++ KG   D ITYS +++ L +  + + A+++       G  P
Sbjct: 532 GITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRP 591

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            V MYN ++  LC   + + A+  ++ M    C+PN  TY  L++GL   G
Sbjct: 592 KVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 642



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 25/413 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V     +I  LC+ GR  +   +    + +    D F Y + + G C+ G ++ A R+
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              M    +  DA TY  +I G C  G++ +   L + M ++GC  +VV+Y +L+  + +
Sbjct: 132 IASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           +    EA+++ + +R K C  +  T+ V+ING+C+                  EGR+ DA
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR------------------EGRVDDA 230

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             ++NR+  +G + +  +  +++ G   A + ++   LF EM  K C P  V+++ L+  
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+      A   +++M + G  P+    +++IN +C+  ++D A          G  PD
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              Y  ++ GLC AG+ E A +L   M ++NC PN VT+NT +  L + G  ++A+++  
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + E      I++YN  + G C   R+  A E  N+  C    P TIT+  L+
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLL 460



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 166/357 (46%), Gaps = 22/357 (6%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A R+       G   D      +I   CR G+  +   +       G  ++V +YN L+ 
Sbjct: 58  AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G    G++D A     L+       D+ T+  +I GLC                    GR
Sbjct: 118 GYCRYGRLDAA---RRLIASMPVPPDAYTYTPIIRGLCD------------------RGR 156

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + DA +L++ M + GC+ +  T   L+    ++S    A+ +  EM  KGC+P +V+YN 
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +ING+C+  R  +A   +  +   G++PD+++Y+ ++ GLC +++ D    L  + + K 
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+   +++L+   C  G VE A+Q+   M +  C PN    N +++ + K G  D A 
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  N++      PD ISY   L+GLC   R   A E L + + +   P  +T++  +
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFI 393



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 20/323 (6%)

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +R L+    + EA  + E    +    D      LI  LC+ G  + A ++L   E  G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 377 -----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            GRL  A  L+  M       +AYT   ++ G     ++ +A+ 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L  +M ++GC P+VV+Y  L+  +CK   FGEA + + EM  KG  P+++TY+++ING+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  ++D A ++  +    GF PD+  Y  ++ GLC+A + +D   L++ M  + CVPN V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           T++ L+    + G  ++A+++   + +    P+    NI +  +C   R+ DA++FLN+ 
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
              G  P TI++  ++R +   G
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAG 365


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 280/515 (54%), Gaps = 22/515 (4%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + +  +GL+P++  Y +VIN L K G++  A ++ +++F+ G++ +   Y  +I G+ + 
Sbjct: 217 HQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
            D   A EI+ R+  E    PN  TY+ +INGLC  GR +E L+    M ++       T
Sbjct: 277 RDLDSAFEIFNRMD-EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           + + I  LC  G +E A +++ +M + G   +  TY ++I G  R  ++     L+  M 
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMS 392

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           R G + N V+YN L+  L+EN ++D A+ ++ ++ +  C  +++++  LI G C  G   
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 363 KAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           KA+ +L  + +G                   G    A  ++  M  +GC+ + ++   L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +GF + SK+E A  +F EM  +G  P  V+Y  LI+G CK E+   A   ++ M   G +
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TY++LI+GL +      A +LC   L++  +PDV  Y+ +I+GLC+ G +  AL++
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           ++ M K  C+PNL TY++L+  L + G  ++A E+++ + ++ L PD ++Y   ++    
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             ++  AF+FL + +  G  PT  T+ +L++ + N
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 176/697 (25%), Positives = 297/697 (42%), Gaps = 136/697 (19%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIE----------IQKCYC----PEDVA-LSVIQAYGK 85
           +H ILR  + P L+++ S I  L +          I K +     P+     S+I  Y +
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI------------------------------------ 109
           N   D A ++F RM+E  GCE                                       
Sbjct: 276 NRDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334

Query: 110 --------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING----------------- 144
                   LC   + E A +    + +KG KP+VY+Y ++I+G                 
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRD 394

Query: 145 ---------------LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
                          L+++ ++  AL VF+ M + G   N   YN LI G+   GD  +A
Sbjct: 395 GVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKA 454

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +   + ++    P +VTYN++I G C  G  D  + + + MK N  + D ++Y   I 
Sbjct: 455 MSMLTNM-LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G CK   +E A  ++ EM++ G+  + VTY A+I G+C+  K+     + E M R GC  
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +YN+LI GL +      A  + +++ E+  + D  T+  +INGLC NG +  A+++ 
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           N                  +M KHGC  N +T +SL+    Q  ++E A  +F E+ ++G
Sbjct: 634 N------------------KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI---- 484
             P  V+Y  +I       +   A+ F+ EM+  G +P + TY +LI GL Q++ +    
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKL 734

Query: 485 -------------------DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
                              D+   L  +  +  F     +Y+ L+  L  +G+  +A  L
Sbjct: 735 VALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNL 794

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           Y +M  ++  PN  TY   +  L +    D A++++ H+ ++R    +  Y   +  LC 
Sbjct: 795 YRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQ 854

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             R  +A       L R +    I W IL+  ++  G
Sbjct: 855 LHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 219/467 (46%), Gaps = 50/467 (10%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           + TY  ++  L K       ++ + ++ +   + +   Y S I+ LCK GNV  AE +  
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           ++ +SG+  D  TY +MI G+CR   +   FE++  M  +GC  N  +Y+ LI GL  +G
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
           +V+EA+     +          T    I  LC  G +  A +I  ++++ G         
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT 372

Query: 376 ---EGRLAD--AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
               G+     A  L +RM + G   N  T N+LMN  ++  ++++A+ +F  M + GC 
Sbjct: 373 SLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   SYN LI G C +    +A S +  ML+    P ++TY+++I G C S   D+A+++
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492

Query: 491 C-------CQ----------------------------FLQKGFTPDVTMYNILIHGLCS 515
                   CQ                             + +G  P+   Y  LI G C 
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
             K++ A ++   MK+  C PN+ TYN L+ GL K  +   A E+   +LEE++ PD+++
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y+  + GLC+   +  A E  N  +  G LP   T+  L++A+   G
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEG 659



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 207/438 (47%), Gaps = 32/438 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKRFLNSLWEK 129
           +I+ Y  +   D A+ V + M +  GC+             C+  + E A    N + ++
Sbjct: 476 IIKGYCDSGDTDVAIRVLELM-KANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P+  +Y  +I+G  K   L  A  + + M   G   NV  YN+LI G  K+ ++  A
Sbjct: 535 GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +E+  ++++E  + P+VVTY+ +INGLC  G     LEM+++M K+    +  TY S I 
Sbjct: 595 EELC-KVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            L + G VE AE ++ E+ + G+  D VTY  MI+    +GK+   F+    M   GC  
Sbjct: 654 ALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713

Query: 310 VV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            + +Y++LI+GL         +   +L+   N  + ST    +IN    +   +K  ++ 
Sbjct: 714 TLQTYDVLIKGL------QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELD 767

Query: 369 NEVEE----------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
            E+               GR  +A +L   M       N  T    +   ++A K++ A+
Sbjct: 768 FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAM 827

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +FK MS + C   +  Y  LI  LC++ R  EA    ++ML +    D I +++LINGL
Sbjct: 828 DVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887

Query: 479 CQSKKIDMALKLCCQFLQ 496
             +   D    LC +FL 
Sbjct: 888 LGAGYKD----LCMEFLH 901



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 158/385 (41%), Gaps = 68/385 (17%)

Query: 71  CPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAK 120
           CP +V  + +I  Y K+   D A  + +RM    GC   +         L ++  F  A+
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKR-SGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                + E+ + PDV +Y TVINGL  +G +  AL +F++M + G   N+  Y+ LI   
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655

Query: 181 FKKGDYMRAKEIWERL-------------------VMETSV---------------YPNV 206
            ++G    A+E++  L                   VM   V                P +
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTL 715

Query: 207 VTYNVMINGL---------------CKCGRFDECLEMWD-------RMKKNEREKDSFTY 244
            TY+V+I GL                    FD+ +   D       ++ + + E     Y
Sbjct: 716 QTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLY 775

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + +  L ++G    A  +YR MV      +  TY   +    RA K+    ++++ M  
Sbjct: 776 DALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSD 835

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           + C L++  Y  LI  L +  +  EA  ++E +  +  NAD     +LINGL   GY + 
Sbjct: 836 QRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDL 895

Query: 364 AIQILNEVEEGGEGRLADAASLVNR 388
            ++ L+ +E       + A +++ R
Sbjct: 896 CMEFLHIMETNRRNPSSHARTILAR 920


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 176/667 (26%), Positives = 314/667 (47%), Gaps = 115/667 (17%)

Query: 70  YCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAK 120
           Y P+ V + S++  + + +    A+ +  +M EI        +      LC+ ++   A 
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
            F   +  KG++P+V +Y  ++NGL  S     A  +  +M ++ +  NV+ Y+ L+D F
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K G  + AKE++E +V   S+ P++VTY+ +INGLC   R DE  +M+D M       D
Sbjct: 374 VKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             +Y + I+G CKA  VE   +++REM + G+  + VTYN +I GF +AG + +  E + 
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492

Query: 301 VMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M   G   ++ +YNIL+ GL +NG++++A+ I+E ++++  + D  T+  +I G+CK G
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552

Query: 360 YLNKAIQI----------------------------LNEVE--------EG--------G 375
            + +A  +                            L+EVE        EG         
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612

Query: 376 EGRLADAASLVNRMDKHG-------------CK-----LNAYTCNS-------LMNGFIQ 410
           +G +  +A L+ +M   G             CK     L A++  +       L    + 
Sbjct: 613 DGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLS 672

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             KL++A+ LF EM +    P+++ ++ L++ + K+ +F    S  ++M   G   +  T
Sbjct: 673 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+LIN  C+  ++ +AL +  + ++ G+ P++   + L++G C + ++ +A+ L   M 
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 531 KRNCVPNLVTYNTLMDGLF-----------------------------------KTGDCD 555
                PN VT+NTL+ GLF                                   K GD D
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A  + N + + +L P ++ YN  + GLC    M DA     +   +GI P  +T+  L+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 616 RAVMNNG 622
             + N G
Sbjct: 913 SCLCNYG 919



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 252/494 (51%), Gaps = 20/494 (4%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G+  + Y+Y  +IN   +   L  ALAV  +M + G E N+V  + L++G+        A
Sbjct: 725  GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              + +++ + T   PN VT+N +I+GL    +  E + + DRM     + D  TY   ++
Sbjct: 785  VALVDQMFV-TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            GLCK G+ + A  +  +M +  +    + YN +IDG C+   + +   L++ M  KG   
Sbjct: 844  GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            NVV+Y+ LI  L   G+  +A  +   + E+  N D  T   LI+   K           
Sbjct: 904  NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK----------- 952

Query: 369  NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   EG+L +A  L + M K     +  T +SL+NGF    +L+ A  +F+ M  K 
Sbjct: 953  -------EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 1005

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            C P VV+YNTLI G CK +R  E     +EM ++G   + +TY++LI GL Q+   DMA 
Sbjct: 1006 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 1065

Query: 489  KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            ++  + +  G  P++  YN L+ GLC  GK+E A+ ++  +++    P + TYN +++G+
Sbjct: 1066 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125

Query: 549  FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             K G  +   +++ ++  + ++PD+++YN  + G C      +A     +    G LP +
Sbjct: 1126 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185

Query: 609  ITWHILVRAVMNNG 622
              ++ L+RA + +G
Sbjct: 1186 GCYNTLIRARLRDG 1199



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 233/451 (51%), Gaps = 20/451 (4%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            C  ++  +A   ++ ++  G +P+  ++ T+I+GL        A+A+ D M  +G + ++
Sbjct: 776  CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            V Y ++++G  K+GD   A  +  ++  +  + P V+ YN +I+GLCK    D+ L ++ 
Sbjct: 836  VTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             M+      +  TY S I  LC  G    A R+  +M+E  I  D  T++A+ID F + G
Sbjct: 895  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954

Query: 291  KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            K+ E  +L++ M ++    ++V+Y+ LI G   + ++DEA  ++E +  K+C  D  T+ 
Sbjct: 955  KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 1014

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             LI G CK             VEEG E        +   M + G   N  T N L+ G  
Sbjct: 1015 TLIKGFCK----------YKRVEEGME--------VFREMSQRGLVGNTVTYNILIQGLF 1056

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            QA   + A  +FKEM   G  P +++YNTL++GLCK  +  +A    + +     +P + 
Sbjct: 1057 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116

Query: 470  TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            TY+++I G+C++ K++    L C    KG  PDV  YN +I G C  G  E+A  L+  M
Sbjct: 1117 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            K+   +PN   YNTL+    + GD + + E+
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAEL 1207



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 254/493 (51%), Gaps = 22/493 (4%)

Query: 133  PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
            P +  +  +++ + K       +++ ++M   G+  N   Y+ILI+ F ++     A  +
Sbjct: 693  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 193  WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              ++ M+    PN+VT + ++NG C   R  E + + D+M     + ++ T+ + IHGL 
Sbjct: 753  LGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 811

Query: 253  KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--V 310
                   A  +   MV  G   D VTY  +++G C+ G     F L   M  +G L   V
Sbjct: 812  LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGV 870

Query: 311  VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            + YN +I GL +   +D+A+++++ +  K    +  T+  LI+ LC              
Sbjct: 871  LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-------------- 916

Query: 371  VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                  GR +DA+ L++ M +     + +T ++L++ F++  KL  A  L+ EM ++   
Sbjct: 917  ----NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972

Query: 431  PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
            P++V+Y++LING C  +R  EA    + M+ K   PD++TY+ LI G C+ K+++  +++
Sbjct: 973  PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 491  CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
              +  Q+G   +   YNILI GL  AG  + A +++  M      PN++TYNTL+DGL K
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092

Query: 551  TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
             G  +KA+ ++ ++   ++ P I +YNI ++G+C   ++ D ++   +   +G+ P  + 
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 1152

Query: 611  WHILVRAVMNNGA 623
            ++ ++      G+
Sbjct: 1153 YNTMISGFCRKGS 1165



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 267/599 (44%), Gaps = 108/599 (18%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           Q   A   L  + + G +PD  + G+++NG  +   +  A+++ D+M E G + ++V YN
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 297

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            +ID   K      A + ++  +    + PNVVTY  ++NGLC   R+ +   +   M K
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +   +  TY + +    K G V  A+ ++ EMV   I  D VTY+++I+G C   +I E
Sbjct: 357 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +++++M  KGCL +VVSYN LI G  +  +V++ + ++  + ++   +++ T+  LI 
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 476

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G  + G ++KA +  ++                  MD  G   + +T N L+ G     +
Sbjct: 477 GFFQAGDVDKAQEFFSQ------------------MDFFGISPDIWTYNILLGGLCDNGE 518

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           LE A+ +F++M ++     +V+Y T+I G+CK  +  EA+S    +  KG KPD++TY+ 
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTP--------DVTMYNILIHGLCSAG-------- 517
           +++GLC    +     L  +  Q+G           D+T+   LI  + S G        
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD 638

Query: 518 ------------------------------------KVEDALQLYSNMKKRNCVPNLVTY 541
                                               K++DA+ L+  M K    P+++ +
Sbjct: 639 IKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 698

Query: 542 NTLMDGLFKTGDCDK-----------------------------------ALEIWNHILE 566
           + L+  + K    D                                    AL +   +++
Sbjct: 699 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
               P+I++ +  L G C   R+S+A   ++     G  P T+T++ L+  + ++N AS
Sbjct: 759 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 222/427 (51%), Gaps = 19/427 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++++  +P++V +N +++ + K  ++D  + +  +M+      D +T+   I+  C    
Sbjct: 179 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ 238

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           V  A  +  +M++ G   D VT  ++++GFCR  ++ +   L + M   G   ++V+YN 
Sbjct: 239 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 298

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I  L +  +V++A   ++ +  K    +  T+  L+NGLC +                 
Sbjct: 299 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---------------- 342

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R +DAA L++ M K     N  T ++L++ F++  K+  A  LF+EM R    P +V+
Sbjct: 343 --RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y++LINGLC  +R  EA      M+ KG   D+++Y+ LING C++K+++  +KL  +  
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           Q+G   +   YN LI G   AG V+ A + +S M      P++ TYN L+ GL   G+ +
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL I+  + +  +  DI++Y   ++G+C   ++ +A+        +G+ P  +T+  ++
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580

Query: 616 RAVMNNG 622
             +   G
Sbjct: 581 SGLCTKG 587



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 237/482 (49%), Gaps = 28/482 (5%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ +VK       +++  +M   G+  ++  +NI+I+ F        A  I
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ ++    P+ VT   ++NG C+  R  + + + D+M +   + D   Y + I  LC
Sbjct: 246 LGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 304

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K   V  A   ++E+   GI  + VTY A+++G C + +  +   L  +++ +K   NV+
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ L+   ++NGKV EA  ++E +   + + D  T+  LINGLC +             
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD------------ 412

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R+ +A  + + M   GC  +  + N+L+NGF +A ++E+ + LF+EMS++G   
Sbjct: 413 ------RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V+YNTLI G  +     +A  F  +M   G  PD+ TY++L+ GLC + +++ AL + 
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
               ++    D+  Y  +I G+C  GKVE+A  L+ ++  +   P++VTY T+M GL   
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586

Query: 552 GDCDKALEIWNHILEERLRP--------DIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           G   +   ++  + +E L          DI      +K + SC       + +   +C+ 
Sbjct: 587 GLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKK 646

Query: 604 IL 605
            L
Sbjct: 647 AL 648



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 119/210 (56%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           KL +AI LF +M +    P++V +N L++ + K++++    S  K+M   G + D+ T++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C   ++ +AL +  + L+ G+ PD      L++G C   +V DA+ L   M + 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++V YN ++D L KT   + A + +  I  + +RP++++Y   + GLC+ SR SDA
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              L+D + + I P  IT+  L+ A + NG
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNG 377


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 280/558 (50%), Gaps = 80/558 (14%)

Query: 57  VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           V ++L  I ++     E   + V +AYGK  +PDKA+D+F RM + F C           
Sbjct: 96  VEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRC----------- 144

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
                          K  V S+ +V+N ++  G           ++ RG+E         
Sbjct: 145 ---------------KRSVKSFNSVLNVIINEG-----------LYHRGLE--------- 169

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
              F+   DY+          M  ++ PN +++N++I  LCK    D  +E++  M + +
Sbjct: 170 ---FY---DYVVNSN------MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK 217

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D +TYC+ + GLCK   ++ A  +  EM   G     V YN +IDG C+ G +    
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVT 277

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           +L + M  KGC+ N V+YN LI GL   GK+D+A+S+ E +    C  +  T+G LINGL
Sbjct: 278 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL 337

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            K                  + R  DA  L++ M++ G  LN +  + L++G  +  K E
Sbjct: 338 VK------------------QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L+++M+ KGC P +V Y+ L++GLC+  +  EA   +  M+  G  P+  TYS L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G  ++   + A+++  +  + G + +   Y++LI GLC  G+V++A+ ++S M      
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHIL---EERLRPDIISYNITLKGLCSCSRMSDA 592
           P+ V Y++++ GL   G  D AL++++ +L   E + +PD+++YNI L GLC    +S A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRA 559

Query: 593 FEFLNDALCRGILPTTIT 610
            + LN  L RG  P  IT
Sbjct: 560 VDLLNSMLDRGCDPDVIT 577



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 219/436 (50%), Gaps = 26/436 (5%)

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER----EKDSFT 243
           +A +++ R+V E     +V ++N ++N +   G +   LE +D +  +        +  +
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           +   I  LCK   V+ A  V+R M E     D  TY  ++DG C+  +I E   L + M 
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +GC  + V YN+LI GL + G +     + + +  K C  +  T+  LI+GLC  G L+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           KA+                  SL+ RM    C  N  T  +L+NG ++  +  +A+ L  
Sbjct: 310 KAV------------------SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M  +G       Y+ LI+GL K  +  EA S  ++M EKG KP+++ YS+L++GLC+  
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K + A ++  + +  G  P+   Y+ L+ G    G  E+A+Q++  M K  C  N   Y+
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+DGL   G   +A+ +W+ +L   ++PD ++Y+  +KGLC    M  A +  ++ LC+
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 603 ---GILPTTITWHILV 615
                 P  +T++IL+
Sbjct: 532 EEPKSQPDVVTYNILL 547



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 227/454 (50%), Gaps = 25/454 (5%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I+ +   GD+   +++  R+ +E  V     ++ V+     K    D+ ++++ RM   
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPDKAVDLFHRMVDE 141

Query: 236 EREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESG----IFVDAVTYNAMIDGFCRAG 290
            R K S  ++ S ++ +   G        Y  +V S     I  + +++N +I   C+  
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    E++  M  + CL +  +Y  L+ GL +  ++DEA+ + + ++ + C+     + 
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLI+GLCK G L +  +                  LV+ M   GC  N  T N+L++G  
Sbjct: 262 VLIDGLCKKGDLTRVTK------------------LVDNMFLKGCVPNEVTYNTLIHGLC 303

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              KL+ A+ L + M    C P  V+Y TLINGL K  R  +A   +  M E+G+  +  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            YS+LI+GL +  K + A+ L  +  +KG  P++ +Y++L+ GLC  GK  +A ++ + M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
               C+PN  TY++LM G FKTG C++A+++W  + +     +   Y++ + GLC   R+
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +A    +  L  GI P T+ +  +++ +   G+
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 198/397 (49%), Gaps = 17/397 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L++ L  E+    A+ L D    E G + SP +++ ++  L     +  V+++++ + ++
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKA 119
            C   E    ++I         DKA+ + +RM       N++ +G     L ++R+   A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            R L+S+ E+G   + + Y  +I+GL K G    A++++ +M E+G + N+V Y++L+DG
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             ++G    AKEI  R++  +   PN  TY+ ++ G  K G  +E +++W  M K    +
Sbjct: 407 LCREGKPNEAKEILNRMI-ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + F Y   I GLC  G V+ A  V+ +M+  GI  D V Y+++I G C  G +    +L+
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525

Query: 300 EVM----GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
             M      K   +VV+YNIL+ GL     +  A+ +   + ++ C+ D  T    +N L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585

Query: 356 C-KNGYLNKAIQILNE--VEEGGEGRLADAASLVNRM 389
             K+   +K    L E  V      R++ A ++V  M
Sbjct: 586 SEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVM 622



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 111/227 (48%), Gaps = 5/227 (2%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAYSF----VKE 458
           +   + +A   + A+ LF  M  +  C  +V S+N+++N +     +     F    V  
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
            +     P+ ++++L+I  LC+ + +D A+++     ++   PD   Y  L+ GLC   +
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +++A+ L   M+   C P+ V YN L+DGL K GD  +  ++ +++  +   P+ ++YN 
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            + GLC   ++  A   L   +    +P  +T+  L+  ++    +T
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 166/598 (27%), Positives = 287/598 (47%), Gaps = 84/598 (14%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F S  +   +      F+ ++           + ++L  + ++     E     + +AY
Sbjct: 58  IFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAY 117

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P+KA+++F RM+  F C                          KP V S+ +V+N
Sbjct: 118 GKAHLPNKAIELFYRMSFEFYC--------------------------KPTVKSFNSVLN 151

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV--METS 201
            ++++                                   G + RA E +  +V   + +
Sbjct: 152 VIIQA-----------------------------------GFHDRALEFYNHVVGAKDMN 176

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PNV+++N++I  +CK G  D  +E++  M   +   D++TYC+ + GLCK   ++ A 
Sbjct: 177 ILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAV 236

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            +  EM   G F    T+N +I+G C+ G      +L + M  KGC+ N V+YN LI GL
Sbjct: 237 SLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 296

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              GK+D+A+S+ + +    C  +  T+G +INGL K                  +GR  
Sbjct: 297 CLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVK------------------QGRAL 338

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           D A ++  M++ G  +N Y  + L++G  +  K E A+ LFKE   KGC    V Y+ L+
Sbjct: 339 DGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALV 398

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC+  +  EA   + EM +KG  P+  T+S L+ G  +      A+++     +    
Sbjct: 399 DGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCA 458

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            +   Y++LIHGLC  GKV +A+ +++ M    C P++V Y++++ GL   G  ++AL++
Sbjct: 459 ENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKL 518

Query: 561 WNHIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           +N +L  E   +PD+I+YNI    LC  S +S A + LN  L RG  P  +T +I +R
Sbjct: 519 YNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 224/477 (46%), Gaps = 57/477 (11%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I++  K  + D A+++F+ M  +  C             LC+  + ++A   L+ +  +
Sbjct: 187 IIKSMCKLGLVDNAIELFREM-PVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIE 245

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P   ++  +INGL K GD      + D MF +G   N V YN LI G   KG   +A
Sbjct: 246 GCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +R+V    V PN VTY  +INGL K GR  +   +   M++     + + Y   + 
Sbjct: 306 LSLLDRMVSSKCV-PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVS 364

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GL K G  E A R+++E ++ G  ++ V Y+A++DG CR  K  E  ++   M  KGC  
Sbjct: 365 GLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAP 424

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +++ L++G  E G   +AI +W+ + + NC  +   + VLI+GLCK           
Sbjct: 425 NAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCK----------- 473

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM--SR 426
                  +G++ +A  +  +M   GC+ +    +S++ G   A  +E A+ L+ EM    
Sbjct: 474 -------DGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLE 526

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
               P V++YN L N LCK      A   +  ML++G  PD++T ++ +  L   +K+D 
Sbjct: 527 PDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML--REKLDP 584

Query: 487 -----------------------ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                                  A K+    LQK  +P  + +  ++H LC   K++
Sbjct: 585 PQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQ 641



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 187/388 (48%), Gaps = 42/388 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + +KA   L+ +      P+  +YGT+INGLVK G  L    V   M ERG   N
Sbjct: 296 LCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVN 355

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y++L+ G FK+G    A  +++   M+     N V Y+ +++GLC+  + DE +++ 
Sbjct: 356 EYVYSVLVSGLFKEGKSEEAMRLFKE-SMDKGCKLNTVLYSALVDGLCRDRKPDEAMKIL 414

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       ++FT+ S + G  + GN   A  V+++M +     + V Y+ +I G C+ 
Sbjct: 415 SEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKD 474

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADST 346
           GK+ E   +W  M   GC  +VV+Y+ +I+GL + G V+EA+ ++   L  E +   D  
Sbjct: 475 GKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVI 534

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +L N LCK   +++A+ +LN              S+++R    GC  +  TCN    
Sbjct: 535 TYNILFNALCKQSSISRAVDLLN--------------SMLDR----GCDPDLVTCN---- 572

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPT---VVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
                        +F  M R+   P        + L+  L K +R   A   V+ ML+K 
Sbjct: 573 -------------IFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKF 619

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLC 491
             P   T++ +++ LCQ KKI   +  C
Sbjct: 620 LSPKASTWARVVHELCQPKKIQAVIDKC 647



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 186/388 (47%), Gaps = 25/388 (6%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREM-VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           T+ S I     + +    E+V   M +E+ +F +  ++  M   + +A    +  EL+  
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEK-SFFVMFKAYGKAHLPNKAIELFYR 132

Query: 302 MGRKG-CLNVV-SYNILIRGLLENGKVDEAISIWELL---REKNCNADSTTHGVLINGLC 356
           M  +  C   V S+N ++  +++ G  D A+  +  +   ++ N   +  +  ++I  +C
Sbjct: 133 MSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMC 192

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G ++ AI++  E                  M    C  +AYT  +LM+G  +  +++ 
Sbjct: 193 KLGLVDNAIELFRE------------------MPVRKCVPDAYTYCTLMDGLCKVDRIDE 234

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ L  EM  +GC P+  ++N LINGLCK   F      V  M  KG  P+ +TY+ LI+
Sbjct: 235 AVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIH 294

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GLC   K+D AL L  + +     P+   Y  +I+GL   G+  D  ++   M++R  + 
Sbjct: 295 GLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIV 354

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N   Y+ L+ GLFK G  ++A+ ++   +++  + + + Y+  + GLC   +  +A + L
Sbjct: 355 NEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKIL 414

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
           ++   +G  P   T+  L++     G S
Sbjct: 415 SEMTDKGCAPNAFTFSSLMKGFFEVGNS 442



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 78/148 (52%), Gaps = 6/148 (4%)

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCVPN 537
           +K I++  ++  +F  K   P V  +N +++ +  AG  + AL+ Y+++   K  N +PN
Sbjct: 124 NKAIELFYRMSFEFYCK---PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPN 180

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++++N ++  + K G  D A+E++  +   +  PD  +Y   + GLC   R+ +A   L+
Sbjct: 181 VLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLD 240

Query: 598 DALCRGILPTTITWHILVRAVMNNGAST 625
           +    G  P+  T+++L+  +   G  T
Sbjct: 241 EMQIEGCFPSPATFNVLINGLCKKGDFT 268


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 263/528 (49%), Gaps = 36/528 (6%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNVVCY 173
               A+R L S+   G+ P+VY+Y  ++  L   G    AL V  D+M   G   NVV Y
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N L+  F + G+ + A E    ++ E  V P++VT+N ++NGLCK GR ++  +M+D M 
Sbjct: 194 NTLVAAFCRAGE-VDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA 252

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           +     D  +Y + + G CKAG +  A  V+ EM + G+  D VT+ ++I   CRAG ++
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLE 312

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
               L   M  +G  +N  ++  LI G   NG +D+A+   + +RE         + VLI
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           NG CK                   GR+ +A  L++ M+  G K +  T +++++G+ +  
Sbjct: 373 NGYCK------------------LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
             ++A  L ++M +KG  P  ++Y++LI GLC+  R G+A    ++ML+ G +PD  TY+
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+G C+   +  AL L  + ++KG  PDV  Y++LI GL  + + ++A +L   +   
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 533 NCVPNLVTYNTLM---------------DGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + VP+ + Y  LM                G    G  ++A +++  +L+   + D   Y+
Sbjct: 535 DPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYS 594

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + + G C    +  A  F    L  G  P + +   LVR +   G + 
Sbjct: 595 VLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTV 642



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 35/472 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  + + A+R +  + E G++P + ++ TV+NGL K+G +  A  +FDEM   G+  +
Sbjct: 200 FCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN L+ G+ K G    A  ++  +  +  V P+VVT+  +I+ +C+ G  +  + + 
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMA-QKGVVPDVVTFTSLIHAMCRAGNLERAVALV 318

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++     + FT+ + I G C+ G ++ A    +EM E  I    V YN +I+G+C+ 
Sbjct: 319 GQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKL 378

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  EL   M  KG   +VV+Y+ ++ G  + G  D A  +   + +K    D+ T+
Sbjct: 379 GRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITY 438

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI GLC+                  E RL DA  L  +M + G + + +T  +L++G 
Sbjct: 439 SSLIRGLCE------------------ERRLGDACELFEKMLQLGLQPDEFTYTTLIDGH 480

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L  EM +KG  P VV+Y+ LI+GL K  R  EA   + ++  +   PD 
Sbjct: 481 CKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540

Query: 469 ITYSLLIN---------------GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           I Y  L++               G      ++ A K+    L + +  D ++Y++LIHG 
Sbjct: 541 IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH 600

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           C  G +  AL  +  + +    PN  +  +L+ GLF+ G   +A  +   +L
Sbjct: 601 CRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 182/344 (52%), Gaps = 21/344 (6%)

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI-WE 334
           + YNA++     A  +     L   M R G   NV +YNIL+R L   G+ +EA+ +  +
Sbjct: 121 LAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGD 179

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +R   C  +  T+  L+   C+ G ++ A +++  + EGG                   
Sbjct: 180 DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGG------------------V 221

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + +  T N+++NG  +A ++E+A  +F EM+R+G +P  VSYNTL++G CK     EA +
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              EM +KG  PD++T++ LI+ +C++  ++ A+ L  Q  ++G   +   +  LI G C
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G ++DAL     M++    P++V YN L++G  K G  D+A E+ + +  + ++PD++
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +Y+  L G C       AFE     L +G++P  IT+  L+R +
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGL 445



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 29/321 (9%)

Query: 60  ILELIEIQKCYC-PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------- 110
           +L + E+++C   P  V  +V I  Y K    D+A ++   M E  G +  ++       
Sbjct: 350 LLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM-EAKGMKPDVVTYSTILS 408

Query: 111 --CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
             C+    + A      + +KG+ PD  +Y ++I GL +   L  A  +F++M + G++ 
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +   Y  LIDG  K+G+  +A  + + ++ +  V P+VVTY+V+I+GL K  R  E   +
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSLHDEMI-KKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 229 WDRMKKNEREKDSFTYCSFIH---------------GLCKAGNVEGAERVYREMVESGIF 273
             ++   +   D+  Y + +H               G    G +  A++VY+ M++    
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWK 587

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
           +D   Y+ +I G CR G I +     + + R G   N  S   L+RGL E G   EA ++
Sbjct: 588 LDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNV 647

Query: 333 WELLREKNCNADSTTHGVLIN 353
            + L      AD+ T   LI+
Sbjct: 648 IQELLNCCSLADAETSKALID 668


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 264/522 (50%), Gaps = 33/522 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R+ + +KA      + +K  +PD +++  ++ GL +S  L  A  +   M E G   +
Sbjct: 17  LTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPD 76

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI G+ K  D+ +A +    +V +    P VVTY  +++GLCK  R  + +++ 
Sbjct: 77  DAIYNALISGYSKAKDFGQAFKFLAEMV-KNHCLPTVVTYTNIVDGLCKAERTRDAVKLL 135

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+      + +TY   + GLC+   ++ A+++  EM   G F D VTYN+ I G C+ 
Sbjct: 136 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 195

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++ E  +    M      +VVSY  +I GL ++G +D A  + + +  + C  D  T+ 
Sbjct: 196 DRVDEARKFLARMPVTP--DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK G + +A+ +L+                   M K GC+ N    NSL+    
Sbjct: 254 SLIDGFCKGGEVERAMGLLDS------------------MLKLGCRPNMVAYNSLLGALH 295

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP--- 466
           +   +  A  +  EM R+G +P VVSYN  I+GLCK ER  +A +    M+E+G  P   
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 467 -------DMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGK 518
                  D++ Y++L++GLC+  + D A  L  + L +K   PDV  YN+++   C   +
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ ALQ++  M ++NC  N+VT+N L+ GL        A  +   +++E   PD ++Y  
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            +  +C C + + A E   +A+  G +P  +T+  L+  +++
Sbjct: 475 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 516



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 262/508 (51%), Gaps = 35/508 (6%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G + +V++Y  ++  L +      A AVF EM ++  + +   + IL+ G  +     +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++  R+  E    P+   YN +I+G  K   F +  +    M KN       TY + + 
Sbjct: 62  RKLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCKA     A ++  EM + G   +  TYN +++G C   K+ E  ++ E M  +G   
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV+YN  I+GL +  +VDEA    + L       D  ++  +INGLCK+G L+ A ++L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +                   M   GC  +  T +SL++GF +  ++E A+ L   M + G
Sbjct: 238 DH------------------MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P +V+YN+L+  L ++   G+A   + EM  +G+ PD+++Y+  I+GLC+++++  A 
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339

Query: 489 KLCCQFLQKGFTP----------DVTMYNILIHGLCSAGKVEDALQLYSN-MKKRNCVPN 537
            +  + +++G TP          D+ +Y +L+ GLC  G+ ++A  L+S  + ++ C P+
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +  YN ++D   K    DKAL+I   +LE+    +++++NI + GLC   R+SDA   L 
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLL 458

Query: 598 DALCRGILPTTITWHILVRAVMNNGAST 625
             +  G +P  +T+  LV A+   G S 
Sbjct: 459 TMVDEGFIPDFVTYGTLVDAMCKCGKSA 486



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 275/550 (50%), Gaps = 44/550 (8%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDK 91
           GY H+   ++ +L +L         S + + +  + C  P+    +++ +   +++  +K
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQ-PDAFTFAILLRGLCRSNQLEK 60

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  +  RM E        I+        + + F +A +FL  + +    P V +Y  +++
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           GL K+     A+ + DEM ++G   N+  YN++++G  ++     AK++ E + +    +
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR-GYF 179

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VVTYN  I GLCKC R DE  +   RM       D  +Y + I+GLCK+G+++ A R+
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRM 236

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              M   G   D VTY+++IDGFC+ G+++    L + M + GC  N+V+YN L+  L  
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G + +A  +   +  +    D  ++   I+GLCK   + KA  + + + E G       
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356

Query: 376 --------------------EGRLADAASLVNR-MDKHGCKLNAYTCNSLMNGFIQASKL 414
                                GR  +A +L ++ +D+  C+ + +  N +++   +  ++
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ + K+M  K C   VV++N L++GLC  +R  +A + +  M+++G+ PD +TY  L
Sbjct: 417 DKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++ +C+  K   AL+L  + ++ G  PDV  Y+ LI GL      E+A  L++ + +R  
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535

Query: 535 VPNLVTYNTL 544
           VP+  T   L
Sbjct: 536 VPDDKTLGLL 545


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 269/515 (52%), Gaps = 3/515 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +   A   L  + + G +PD  ++ T+I G+   G +  AL +FD+M   G   +
Sbjct: 106 FCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPD 165

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +   +V + +  PNV  YN +I+ LCK  +  E   ++
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMV-QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D FTY S IH LC     +    +  EMV+S I  D V++N ++D  C+ 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  ++ + M ++G   NVV+Y  L+ G     ++DEA+ +++ +  K C  +  ++
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             LING CK   ++KAI     ++       + +A  + + M   GC  N  + N+L+NG
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           + +  +++ A++LF EM R+   P  V+Y+TLI+GLC VER  +A +   EM+     P+
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY +L++ LC+++ +  A+ L          PD+ + NI I G+C AG++E A  L+S
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           N+  +   P++ TY+ +++GL + G  D+A +++  + E     +   YN   +G    +
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             S A + L + + RG      T  + V+ + ++G
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 221/491 (45%), Gaps = 72/491 (14%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ V +N ++  + K       L +  +M       + +T    I+  C    V  A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
             ++++ G   D  T+  +I G C  GKI E   L++ M  +G   +VV+Y  LI GL +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G    AI +   + +KNC  +   +  +I+ LCK+  + +A  + +E+   G       
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 376 ---------------------------------------------EGRLADAASLVNRMD 390
                                                        EG++ +A  +V++M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER-- 448
           + G + N  T  +LM+G    S+++ A+ +F  M  KGC P V+SYNTLING CK++R  
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 449 -----------------FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
                              EA      M+ KG  P++I+Y+ LING C+ ++ID A+ L 
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  ++   PD   Y+ LIHGLC   +++DA+ L+  M   + +PNLVTY  L+D L K 
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
               +A+ +   I    L PDI   NI + G+C    +  A +  ++   +G+ P   T+
Sbjct: 479 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 538

Query: 612 HILVRAVMNNG 622
            I++  +   G
Sbjct: 539 SIMINGLCRRG 549



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 220/456 (48%), Gaps = 38/456 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+      A R L S+ +K  +P+V++Y T+I+ L K   +  A  +F EM  +G+  +
Sbjct: 176 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN LI       ++     +   +V ++ + P+VV++N +++ LCK G+  E  ++ 
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+M +   E +  TY + + G C    ++ A +V+  MV  G   + ++YN +I+G+C+ 
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 290 GKIK-------------------ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
            +I                    E  ++++ M  KGC+ NV+SYN LI G  +  ++D+A
Sbjct: 355 QRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 414

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------------- 376
           + ++  +  +    D+ T+  LI+GLC    L  AI + +E+    +             
Sbjct: 415 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474

Query: 377 ----GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                 LA+A +L+  ++      +    N  ++G  +A +LE A  LF  +S KG  P 
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           V +Y+ +INGLC+     EA    +EM E G   +   Y+ +  G  ++ +   A++L  
Sbjct: 535 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 594

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + + +GF+ D +   + +  L   G  +   Q+  N
Sbjct: 595 EMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRN 630



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 170/379 (44%), Gaps = 38/379 (10%)

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++GA   +  M+        V +N ++    +         L   M   G   N+ + +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI       +V  A S+   + +     D+ T   LI G+C                   
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICV------------------ 143

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           EG++ +A  L ++M   G + +  T  +L+NG  +      AI L   M +K C P V +
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YNT+I+ LCK  +  EA++   EM+ KG  PD+ TY+ LI+ LC   +      L  + +
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                PDV  +N ++  LC  GKV +A  +   M +R   PN+VTY  LMDG     + D
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSR-------------------MSDAFEFL 596
           +A+++++ ++ +   P++ISYN  + G C   R                   M +A +  
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 597 NDALCRGILPTTITWHILV 615
           +  +C+G +P  I+++ L+
Sbjct: 384 DTMVCKGCMPNVISYNTLI 402



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 198/428 (46%), Gaps = 51/428 (11%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP-EDVALSVIQ 81
            + DS  ++     + +LF  ++ + I P +  + S I  L  +    C  + VA  + +
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL----CEWKHVATLLNE 261

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
                 MPD            F      LC++ +  +A   ++ + ++G++P+V +Y  +
Sbjct: 262 MVDSKIMPDVV---------SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL----- 196
           ++G     ++  A+ VFD M  +G   NV+ YN LI+G+ K     +A      +     
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCC 372

Query: 197 ---------VMETSV----YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                    V +T V     PNV++YN +ING CK  R D+ + ++  M + E   D+ T
Sbjct: 373 YLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 432

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM- 302
           Y + IHGLC    ++ A  ++ EMV      + VTY  ++D  C+   + E   L + + 
Sbjct: 433 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           G     ++   NI I G+   G+++ A  ++  L  K    D  T+ ++INGLC+ G L+
Sbjct: 493 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 552

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A ++  E                  MD++GC LN    N++  GF++ ++   AI L +
Sbjct: 553 EASKLFRE------------------MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 594

Query: 423 EMSRKGCS 430
           EM  +G S
Sbjct: 595 EMVARGFS 602



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 125/244 (51%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A S  NRM +     +    N L+    +       + L  +M   G  P + + + LIN
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
             C + R G A+S + ++L+ G +PD  T++ LI G+C   KI  AL L  + + +GF P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y  LI+GLC  G    A++L  +M ++NC PN+  YNT++D L K     +A  ++
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + ++ + + PDI +YN  +  LC+          LN+ +   I+P  ++++ +V A+   
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 622 GAST 625
           G  T
Sbjct: 285 GKVT 288



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 113/219 (51%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N   +  +  + ++ AI  F  M R    P+ V +N L+  + K++      S   +M  
Sbjct: 30  NRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P++ T  +LIN  C   ++  A  +  + L+ G  PD   +  LI G+C  GK+ +
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      P++VTY TL++GL K G+   A+ +   ++++  +P++ +YN  + 
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            LC   ++++AF   ++ + +GI P   T++ L+ A+ N
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 13/257 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D+A+ VF  M    GC   ++         C+ ++ +KA      +  + L PD  +Y T
Sbjct: 377 DEAVKVFDTM-VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 435

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+GL     L  A+A+F EM       N+V Y IL+D +  K  Y+       + +  +
Sbjct: 436 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD-YLCKNRYLAEAMALLKAIEGS 494

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           ++ P++   N+ I+G+C+ G  +   +++  +     + D +TY   I+GLC+ G ++ A
Sbjct: 495 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGL 320
            +++REM E+G  ++   YN +  GF R  +     +L + M  +G     S   L   +
Sbjct: 555 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 614

Query: 321 LENGKVDEAISIWELLR 337
           L +  +D+  S+ ++LR
Sbjct: 615 LSDDGLDQ--SLKQILR 629



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/142 (19%), Positives = 56/142 (39%)

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ID A+    + L+    P    +N L+  +         L L   M      PN+ T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L++          A  +   IL+   +PD  ++   ++G+C   ++ +A    +  +  G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 604 ILPTTITWHILVRAVMNNGAST 625
             P  +T+  L+  +   G ++
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTS 183


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 172/591 (29%), Positives = 290/591 (49%), Gaps = 80/591 (13%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F SA +   +         ++    +      V ++L  I ++     E   + V +AY
Sbjct: 63  MFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAY 122

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P+KA+D+F RM + F C                          K  V S+ +V+N
Sbjct: 123 GKAHLPEKAVDLFHRMVDEFRC--------------------------KRSVKSFNSVLN 156

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            ++  G           ++ RG+E            F+   DY+          M  ++ 
Sbjct: 157 VIINEG-----------LYHRGLE------------FY---DYVVNSN------MNMNIS 184

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN +++N++I  LCK G  D  +E++  M + +   D +TYC+ + GLCK   ++ A  +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM   G     V YN +IDG C+ G +    +L + M  KGC  N V+YN LI GL  
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D+A+S+ E +    C  +  T+G LINGL K                  + R  D 
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK------------------QRRAMDG 346

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           A L+  M++ G +LN +  + L++G  +  K E A+ L+K+M+ KGC P +V Y+ +I+G
Sbjct: 347 ARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDG 406

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+  +  EA   +  M+  G  P++ TYS L+ G  ++   + A+++  +  + G + +
Sbjct: 407 LCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRN 466

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              Y++LI GLC  G+V++A+ ++S M      P+ V Y++++ GL   G  D AL++++
Sbjct: 467 EFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYH 526

Query: 563 HIL---EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            +L   E + +PD+++YNI L GLC    +S A + LN  L RG  P  IT
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 222/478 (46%), Gaps = 52/478 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKG 130
           VI+A  K    D+A++VF+ M E      G         LC++ + ++A   L+ +  +G
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             P    Y  +I+GL K GDL     + D MF +G   N V YN LI G   KG   +A 
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + ER+V    + PN VTY  +INGL K  R  +   +   M++     +   Y   I G
Sbjct: 313 SLLERMVSSKCI-PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISG 371

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           L K G  E A  ++++M E G   + V Y+A+IDG CR GK  E  E+   M   GCL N
Sbjct: 372 LFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPN 431

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V +Y+ L++G  + G  +EAI +W  + E  C+ +   + VLI+GLC             
Sbjct: 432 VYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC------------- 478

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM---SR 426
                G GR+ +A  + ++M   G K +    +S++ G      ++ A+ L+ EM     
Sbjct: 479 -----GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS----- 481
               P VV+YN L++GLC  +    A   +  ML++G  PD+IT +  +N L +      
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCE 593

Query: 482 ----------------KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                           +++  A K+    L K   P  + + +++  +C   K+  A+
Sbjct: 594 EGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 238/488 (48%), Gaps = 30/488 (6%)

Query: 140 TVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYM---RAKEIWER 195
           + ++ ++++   LG  A  +++  R  +E  V+     I  F   G      +A +++ R
Sbjct: 78  STLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHR 137

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER----EKDSFTYCSFIHGL 251
           +V E     +V ++N ++N +   G +   LE +D +  +        +  ++   I  L
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK G V+ A  V+R M E     D  TY  ++DG C+  +I E   L + M  +GC  + 
Sbjct: 198 CKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V YN+LI GL + G +     + + +  K C  +  T+  LI+GLC  G L+KA+     
Sbjct: 258 VIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV----- 312

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                        SL+ RM    C  N  T  +L+NG ++  +  +   L   M  +G  
Sbjct: 313 -------------SLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYR 359

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
                Y+ LI+GL K  +  EA +  K+M EKG +P+++ YS +I+GLC+  K + A ++
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               +  G  P+V  Y+ L+ G    G  E+A+Q++  M +  C  N   Y+ L+DGL  
Sbjct: 420 LNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCG 479

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR---GILPT 607
            G   +A+ +W+ +L   ++PD ++Y+  +KGLC    M  A +  ++ LC+      P 
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539

Query: 608 TITWHILV 615
            +T++IL+
Sbjct: 540 VVTYNILL 547



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 228/454 (50%), Gaps = 25/454 (5%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I+ +   GD+   +++  R+ +E  V     ++ V+     K    ++ ++++ RM   
Sbjct: 83  MIENYANLGDFASVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPEKAVDLFHRMVDE 141

Query: 236 EREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESG----IFVDAVTYNAMIDGFCRAG 290
            R K S  ++ S ++ +   G        Y  +V S     I  + +++N +I   C+ G
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLG 201

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    E++  M  K CL +  +Y  L+ GL +  ++DEA+ + + ++ + C+     + 
Sbjct: 202 FVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLI+GLCK G L++  +                  LV+ M   GC  N  T N+L++G  
Sbjct: 262 VLIDGLCKKGDLSRVTK------------------LVDNMFLKGCFPNEVTYNTLIHGLC 303

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              KL+ A+ L + M    C P  V+Y TLINGL K  R  +    +  M E+G++ +  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQH 363

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            YS+LI+GL +  K + A+ L  +  +KG  P++ +Y+ +I GLC  GK  +A ++ + M
Sbjct: 364 IYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM 423

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
               C+PN+ TY++LM G FKTG  ++A+++W  + E     +   Y++ + GLC   R+
Sbjct: 424 ISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRV 483

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +A    +  L  GI P T+ +  +++ +   G+
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 228/488 (46%), Gaps = 65/488 (13%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L++ L  E+    A+ L D    E G + SP +++ ++  L     +  V+++++ + ++
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
            C+  E    ++I         DKA+ + +RM                          + 
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERM--------------------------VS 320

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            K +  DV +YGT+INGLVK    +    +   M ERG   N   Y++LI G FK+G   
Sbjct: 321 SKCIPNDV-TYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAE 379

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  +W+++  E    PN+V Y+ +I+GLC+ G+ +E  E+ + M  +    + +TY S 
Sbjct: 380 EAMTLWKKMA-EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSL 438

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G  K G  E A +V+REM E+G   +   Y+ +IDG C  G++KE   +W  M   G 
Sbjct: 439 MKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIW-ELL--REKNCNADSTTHGVLINGLCKNGYLNK 363
             + V+Y+ +I+GL   G +D A+ ++ E+L   E     D  T+ +L++GLC    +++
Sbjct: 499 KPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSR 558

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A+ +LN               +++R    GC  +  TCN+ +N   + S           
Sbjct: 559 AVDLLN--------------CMLDR----GCDPDVITCNTFLNTLSEKS----------- 589

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
                C         L+  L K +R   A   V+ ML K   P   T+++++  +C+ KK
Sbjct: 590 ---DSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKK 646

Query: 484 IDMALKLC 491
           I+ A+  C
Sbjct: 647 INAAINKC 654



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 22/320 (6%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV----LINGLCKNGYLNKA 364
           +V S+N ++  ++  G     +  ++ +   N N + + +G+    +I  LCK G++++A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRA 206

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           I++                     M +  C  + YT  +LM+G  +  +++ A+ L  EM
Sbjct: 207 IEVFRG------------------MPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +GCSP+ V YN LI+GLCK          V  M  KG  P+ +TY+ LI+GLC   K+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+ L  + +     P+   Y  LI+GL    +  D  +L  +M++R    N   Y+ L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + GLFK G  ++A+ +W  + E+  RP+I+ Y+  + GLC   + ++A E LN  +  G 
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428

Query: 605 LPTTITWHILVRAVMNNGAS 624
           LP   T+  L++     G S
Sbjct: 429 LPNVYTYSSLMKGFFKTGLS 448


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 271/531 (51%), Gaps = 20/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +CR+     A   L  + E G  P   +Y  VI   VK G+ + AL + DEM   G+  N
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+    L+ G+   GD   A ++++ +V E  V P+VV ++V+ING  K G  ++  E++
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVV-EGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RMK    + + F   S + G  +   +E A  ++ E VE GI  + VTYN ++      
Sbjct: 384 TRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGEL 442

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E   LWE M  KG   ++VSYN LI G  + G +D+A S+ + + E+    ++ T+
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY 502

Query: 349 GVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDK 391
            +LI+G  K G   +A  +  ++                   G  GR+++    +N   K
Sbjct: 503 TLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIK 562

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G    + T NS+++GF +   +++A+  ++EM   G SP V++Y +LI+GLCK  + G 
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGL 622

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     +M  KG K D++ YS LI+G C+   ++ A K   + L  G TP+  +YN +I 
Sbjct: 623 ALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMIS 682

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G      +E AL L+  M K     +L  Y +++ GL K G    AL++++ +L + + P
Sbjct: 683 GFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVP 742

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DI+ Y + + GL +  ++ +A + L +     I P+ + ++IL+      G
Sbjct: 743 DIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREG 793



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 171/374 (45%), Gaps = 55/374 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-------- 162
           C+K   +KA   L S+ E+GLKP+  +Y  +I+G  K GD   A  VF++M         
Sbjct: 475 CKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTD 534

Query: 163 ---------------------------ERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
                                      ++G  +  + YN +IDGFFK+G    A   + R
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAY-R 593

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            + E+ + P+V+TY  +I+GLCK  +    LEM   MK    + D   Y + I G CK  
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMH 653

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYN 314
           ++E A + + E+++ G+  + V YN+MI GF     ++    L  E++  K   ++  Y 
Sbjct: 654 DMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYT 713

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I GLL+ GK+  A+ ++  +  K+   D   + VLINGL  NG L  A +IL E    
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE---- 769

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                         MD +    +    N L+ G  +   L+ A  L  EM  KG  P   
Sbjct: 770 --------------MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDT 815

Query: 435 SYNTLINGLCKVER 448
           +Y+ L+NG  KV  
Sbjct: 816 TYDILVNGKLKVSH 829



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 237/545 (43%), Gaps = 40/545 (7%)

Query: 87  SMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWE--KGLKPDVYSYGTVING 144
           S P  AL  F ++            RKR F K   F++ L            S   ++N 
Sbjct: 72  SNPKSALKFFHQVE-----------RKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNN 120

Query: 145 LVKSGDLLGALAVFDEMF-----ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            V  GD   +  VF E         G E++   +N L+  F +      A E + R ++E
Sbjct: 121 YV-FGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECF-RTMLE 178

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + P V   N ++  + +     +  +++D M +     D +T    +    K G  E 
Sbjct: 179 HDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEE 238

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
            E+ ++E    G+ VDA  Y+ ++   CR   +    EL + M   G + +  +Y  +I 
Sbjct: 239 VEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIV 298

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
             ++ G   EA+ + + +       +      L+ G C  G +N A+Q+ +EV EGG   
Sbjct: 299 ACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGG--- 355

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                             +    + L+NG  +   +E A  L+  M   G  P V   N+
Sbjct: 356 ---------------VVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           L+ G  +      AY    E +E G   +++TY++L+  L +  K++ A  L  + + KG
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            TP +  YN LI G C  G ++ A  +  ++ +R   PN VTY  L+DG FK GD ++A 
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++  ++   + P   ++N  + GL    R+S+  + LN+ + +G + T+IT++ ++   
Sbjct: 520 VVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579

Query: 619 MNNGA 623
              GA
Sbjct: 580 FKEGA 584



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 170/388 (43%), Gaps = 20/388 (5%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E DS  +   +    +   +  A   +R M+E  +       N ++    R   + +  +
Sbjct: 147 ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQ 206

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L++ M  +G   +  + ++++R  ++ GK +E    ++  + +    D+  + +L+  +C
Sbjct: 207 LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVC 266

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           +   LN A ++L E+ E G             +   G              F++A +L++
Sbjct: 267 RRLDLNLACELLKEMREFG------------WVPSKGTYTAVIVACVKQGNFVEALRLKD 314

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
                 EM   G    V+   +L+ G C +     A     E++E G  PD++ +S+LIN
Sbjct: 315 ------EMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLIN 368

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G  +   ++ A +L  +    G  P+V + N L+ G      +E A  L+    +   + 
Sbjct: 369 GCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-IT 427

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTYN L+  L + G  ++A  +W  ++ + + P ++SYN  + G C    M  A+  L
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSML 487

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
              L RG+ P  +T+ +L+      G S
Sbjct: 488 KSILERGLKPNAVTYTLLIDGFFKKGDS 515



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
           AL D   +      +   F  +L   + P  VV+ S I   I +       + AL++ Q 
Sbjct: 644 ALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM----EAALNLHQE 699

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
             KN +P    D+     +++    G L ++ +   A    + +  K + PD+  Y  +I
Sbjct: 700 MIKNKVP---CDL-----QVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NGL  +G L  A  +  EM    +  +V+ YNILI G F++G+   A  + + + ++  +
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEM-LDKGL 810

Query: 203 YPNVVTYNVMINGLCKCGR 221
            P+  TY++++NG  K   
Sbjct: 811 VPDDTTYDILVNGKLKVSH 829



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 36/186 (19%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKP-----------------------------------D 134
            C+    E A +F   L + GL P                                   D
Sbjct: 649 FCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCD 708

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           +  Y ++I GL+K G L  AL ++ EM  + +  ++V Y +LI+G    G    A +I +
Sbjct: 709 LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK 768

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +    ++ P+V+ YN++I G  + G   E   + D M       D  TY   ++G  K 
Sbjct: 769 EMD-GNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827

Query: 255 GNVEGA 260
            +  G 
Sbjct: 828 SHTLGG 833


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 160/522 (30%), Positives = 265/522 (50%), Gaps = 20/522 (3%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + +KA+   N++   G+ PDV+SY  +ING  K   +  AL +F EM        ++ +N
Sbjct: 253 EVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFN 311

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++D F K   Y  A  +  RL ++  + P++ T N++IN  C  G+      +  ++ K
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELK-GIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                 + T  + I GLC  G V+ A   + +++  G  ++ V+Y  +I+G C+ G  + 
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 295 CFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L  ++ GR    NV  Y+ +I  L +   V EA  ++  +  K  +AD  T+  LI 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 354 GLCKNGYLNKAIQILNEV-----------------EEGGEGRLADAASLVNRMDKHGCKL 396
           G C  G L +AI +LNE+                   G EG++ +A S++  M K   K 
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           + +T N+LMNG++   +++ A  +F  MS  G +P V +Y  LING CK +   EA +  
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           KEM +K   PD +TYS L++GLC+S +I     L  +   +G   DV  YN LI GLC  
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G ++ A+ L++ MK +   PN  T+  L+DGL K G    A E++  +L +    D+  Y
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           N+ + G C    + +A   L+     G +P  +T+ I++ A+
Sbjct: 731 NVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 171/579 (29%), Positives = 284/579 (49%), Gaps = 44/579 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           ++I A  K  +  +A  +F  M  + G  A ++         C   + ++A   LN +  
Sbjct: 138 TIIDALCKYQLVSEAYGLFSEMT-VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVL 196

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K + P+V +Y  +++ L K G +  A +V   M +  V++NV+ Y+ L+DG+F   +  +
Sbjct: 197 KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKK 256

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+ ++  + +   V P+V +YN+MING CK  R D+ L ++  M  + R      +   +
Sbjct: 257 AQHVFNAMSL-MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILS-RFPPIIQFNKIL 314

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGC 307
               K  +   A  +   +   GI  D  T N +I+ FC  G+I   F  L +++ R   
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            + V+ N LI+GL   G+V +A+   + L  +    +  ++  LING+CK G    AI++
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 368 LNEVEEGGEGRL---------------------ADAASLVNRMDKHGCKLNAYTCNSLMN 406
           L +++    GRL                     ++A  L + M   G   +  T ++L+ 
Sbjct: 435 LRKID----GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF    KL+ AI L  EM  K  +P V +Y  L++ L K  +  EA S +  ML+   KP
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ TY+ L+NG     ++  A  +       G TPDV  Y ILI+G C +  V++AL L+
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR---PDIISYNITLKGL 583
             M ++N VP+ VTY++L+DGL K+G   +   +W+ I E R R    D+I+YN  + GL
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSG---RISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C    +  A    N    +GI P T T+ IL+  +   G
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/583 (27%), Positives = 274/583 (46%), Gaps = 27/583 (4%)

Query: 66  IQKCYCPEDVALSVI--------QAYGKNSMPDKALDVFQRMNEI-FGCEAGILCRKRQF 116
           +++ Y P+ V L+ +        Q        DK L    ++N++ +      +CR    
Sbjct: 55  LKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDT 114

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
             A +FL  +  +  KP+V  Y T+I+ L K   +  A  +F EM  +G+  NVV Y+ L
Sbjct: 115 RAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTL 174

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I GF   G    A  +   +V++T + PNV TYN++++ LCK G+  E   +   M K  
Sbjct: 175 IYGFCIVGKLKEALGLLNVMVLKT-INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + +  TY + + G      V+ A+ V+  M   G+  D  +YN MI+GFC+  ++ +  
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 297 ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
            L++ M       ++ +N ++    +      A+S+   L  K    D  T  +LIN  C
Sbjct: 294 NLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
             G +     +L ++ + G                 +G++  A    +++   G +LN  
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 413

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           +  +L+NG  +      AI L +++  +   P V  Y+T+I+ LCK +   EAY    EM
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             KG   D++TYS LI G C   K+  A+ L  + + K   PDV  Y IL+  L   GKV
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A  + + M K    P++ TYNTLM+G     +  KA  ++N +    + PD+ +Y I 
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + G C    + +A     +   + ++P T+T+  LV  +  +G
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSG 636



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 268/539 (49%), Gaps = 35/539 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRM-----------NEIFGCEAGILCRKRQFEKAKRFLNSLW 127
           +I  + K    DKAL++F+ M           N+I    A    + + +  A    + L 
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFA----KMKHYSTAVSLSHRLE 334

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            KG++PD+++   +IN     G +    +V  ++ +RG   + V  N LI G   KG   
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVK 394

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +A    ++L+ +     N V+Y  +ING+CK G     +++  ++     + +   Y + 
Sbjct: 395 KALHFHDKLLAQ-GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I  LCK   V  A  ++ EM   GI  D VTY+ +I GFC  GK+KE   L   M  K  
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +V +Y IL+  L + GKV EA S+  ++ +     D  T+  L+NG     YL     
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG-----YL----- 563

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++ EV++        A  + N M   G   + +T   L+NGF ++  ++ A+ LFKEM +
Sbjct: 564 LVYEVKK--------AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ 615

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           K   P  V+Y++L++GLCK  R    +  + EM ++G   D+ITY+ LI+GLC++  +D 
Sbjct: 616 KNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDK 675

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+ L  +   +G  P+   + IL+ GLC  G+++DA +++ ++  +    ++  YN ++ 
Sbjct: 676 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIY 735

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           G  K G  ++AL + + + E    P+ ++++I +  L        A + L   + RG+L
Sbjct: 736 GHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 249/515 (48%), Gaps = 20/515 (3%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  + ++G  PD  +  T+I GL   G +  AL   D++  +G + N V Y  LI+G  +
Sbjct: 51  LTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCR 110

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            GD  RA   + R +      PNV  YN +I+ LCK     E   ++  M       +  
Sbjct: 111 IGD-TRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I+G C  G ++ A  +   MV   I  +  TYN ++D  C+ GK+KE   +  VM
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 303 GRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
             K C+  NV++Y+ L+ G     +V +A  ++  +       D  ++ ++ING CK   
Sbjct: 230 -LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288

Query: 361 LNKAIQILNEV----------------EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           ++KA+ +  E+                        + A SL +R++  G + + +T N L
Sbjct: 289 VDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +N F    ++     +  ++ ++G  P+ V+ NTLI GLC   +  +A  F  ++L +G+
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           + + ++Y+ LING+C+      A+KL  +   +   P+V MY+ +I  LC    V +A  
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+S M  +    ++VTY+TL+ G    G   +A+ + N ++ + + PD+ +Y I +  L 
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
              ++ +A   L   L   + P   T++ L+   +
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL 563



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 230/465 (49%), Gaps = 25/465 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           +L+V  ++ +RG   + V  N LI G   KG    A    ++L+ +     N V+Y  +I
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQ-GFQLNQVSYATLI 105

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           NG+C+ G     ++   ++     + +   Y + I  LCK   V  A  ++ EM   GI 
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            + VTY+ +I GFC  GK+KE   L  VM  K    NV +YNIL+  L + GKV EA S+
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
             ++ +    ++  T+  L++G            ++ EV++        A  + N M   
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYF----------LVYEVKK--------AQHVFNAMSLM 267

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFG 450
           G   + ++ N ++NGF +  +++ A+ LFKEM  SR    P ++ +N +++   K++ + 
Sbjct: 268 GVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR---FPPIIQFNKILDSFAKMKHYS 324

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A S    +  KG +PD+ T ++LIN  C   +I     +  + L++G+ P     N LI
Sbjct: 325 TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 384

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            GLC  G+V+ AL  +  +  +    N V+Y TL++G+ K GD   A+++   I     +
Sbjct: 385 KGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK 444

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           P++  Y+  +  LC    +S+A+   ++   +GI    +T+  L+
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 20/283 (7%)

Query: 326 VDEAISIWELLR--EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           VD+A+S+  L +  ++    D+ T   LI GLC                   +G++ +A 
Sbjct: 42  VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCL------------------KGQVKEAL 83

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
              +++   G +LN  +  +L+NG  +      AI   +++  +   P V  YNT+I+ L
Sbjct: 84  HFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDAL 143

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK +   EAY    EM  KG   +++TYS LI G C   K+  AL L    + K   P+V
Sbjct: 144 CKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNV 203

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNIL+  LC  GKV++A  + + M K     N++TY+TLMDG F   +  KA  ++N 
Sbjct: 204 CTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNA 263

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           +    + PD+ SYNI + G C   R+  A     + +     P
Sbjct: 264 MSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 90/171 (52%)

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           + S + ++L++G+ PD +T + LI GLC   ++  AL    + L +GF  +   Y  LI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G+C  G    A++    +  R   PN+  YNT++D L K     +A  +++ +  + +  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++++Y+  + G C   ++ +A   LN  + + I P   T++ILV A+   G
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEG 217



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 515 SAGKVEDALQL--YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           S   V+DA+ L   + + KR   P+ VT NTL+ GL   G   +AL   + +L +  + +
Sbjct: 38  SIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLN 97

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +SY   + G+C       A +FL     R   P    ++ ++ A+
Sbjct: 98  QVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDAL 143


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 261/510 (51%), Gaps = 21/510 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVC 172
           R  + A  + N +  +  +P +  +  +++ +VK      A+    +  E  G+  +   
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
            ++LI+ FF+         +  +++ +  +   +VT+N +INGLCK G+F + +E++D M
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKII-KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                + D  TY + I+GLCK G    A  ++R+M E+G   D VTY+ +ID  C+  ++
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +++  M  KG   N+ +YN LI+GL    +  EA ++   +   N   +  T  +L
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           IN  CK                  EG + +A  ++  M + G + N  T +SLMNG+   
Sbjct: 339 INIFCK------------------EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           +++  A  LF  M  KGC P V SYN LING CK +R GEA     EM+ +G  PD+++Y
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+GLCQ  ++  A  L    L  G  PD+  Y+IL+ G C  G +  A +L+  M+ 
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               PN+V YN L+D + K+ +  +A ++++ +  + L+P++  Y   + GLC    + +
Sbjct: 501 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNN 621
           A E   +    G  P   ++++++R  + +
Sbjct: 561 ALEAFRNMEEDGCPPNEFSYNVIIRGFLQH 590



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 218/432 (50%), Gaps = 20/432 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A    + +  +G +PDV++Y T+INGL K G+ + A  +F +M E G + +
Sbjct: 202 LCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPD 261

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +ID   K      A +I+  +  +  + PN+ TYN +I GLC   R+ E   M 
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAML 320

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       +  T+   I+  CK GNV  A  V + M E G+  + VTY+++++G+   
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  +L++VM  KGC  +V SYNILI G  +  ++ EA  ++  +  +    D  ++
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLC+                   GRL +A  L   M  +G   +  T + L++GF
Sbjct: 441 NTLIDGLCQ------------------LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L  A  LF+ M      P +V YN LI+ +CK     EA     E+  +G +P++
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +INGLC+   +D AL+      + G  P+   YN++I G         A+QL   
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 602

Query: 529 MKKRNCVPNLVT 540
           M+++  V ++ T
Sbjct: 603 MREKGFVADVAT 614



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 185/359 (51%), Gaps = 19/359 (5%)

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           ++M  +G+  D  T + +I+ F +  ++   F +   + + G  L +V++N LI GL + 
Sbjct: 146 KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKV 205

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GK  +A+ +++ +  +    D  T+  +INGLCK                   G    AA
Sbjct: 206 GKFGQAVELFDDMVARGYQPDVHTYTTIINGLCK------------------IGETVAAA 247

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  +M + GC+ +  T +++++   +  ++  A+ +F  M  KG SP + +YN+LI GL
Sbjct: 248 GLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGL 307

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C   R+ EA + + EM+     P+++T+SLLIN  C+   +  A  +     + G  P+V
Sbjct: 308 CNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNV 367

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y+ L++G     +V +A +L+  M  + C P++ +YN L++G  K     +A +++N 
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ + L PDI+SYN  + GLC   R+ +A +   + L  G LP   T+ IL+      G
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 158/283 (55%), Gaps = 4/283 (1%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     I C++    +A+  L ++ E G++P+V +Y +++NG     +++ A  +FD M 
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G + +V  YNILI+G+ K      AK+++  ++ +  + P++V+YN +I+GLC+ GR 
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRL 453

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  +++  M  N    D  TY   + G CK G +  A R++R M  + +  + V YN +
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ID  C++  +KE  +L+  +  +G   NV  Y  +I GL + G +DEA+  +  + E  C
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 573

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
             +  ++ V+I G  ++   ++A+Q++ E+ E  +G +AD A+
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE--KGFVADVAT 614


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 261/515 (50%), Gaps = 30/515 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P + +   V+NGL++      AL +FDE+   G+  +V  Y  ++    +  D++RA
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 190 KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           +E+  R  ME+S    +V TYNV I GLCK  R  E +E+ + +       D  TYC+ +
Sbjct: 235 REVIGR--MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLCK    E  E +  EM+E G        + ++DG  + G I   F+L   + + G  
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++  YN LI  + ++GK+DEA S++  +  K    +  T+ +LI+  CK G L+ A+  
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L ++ E G                  G+L  A SL + M  +G K N     SL++G+ +
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +L NA  L+ EM+ KG SP   ++  LI+GLC   R  EA     EM+E    P+ +T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++LI G C+      A +L  + ++KG  PD   Y  LI GLCS G+V +A +  ++++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 531 KRN--------CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
                      C+PN+VTY  L++GL K G  DKA  +   +L     P+  +Y   L  
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L S   +  A + L+D L  G L  T+T++IL+R 
Sbjct: 653 LTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRG 686



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 169/638 (26%), Positives = 307/638 (48%), Gaps = 42/638 (6%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           +LN L   +    AL LFD      G     +++  ++R L + K  +    ++  +E  
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C          I+   KN    +A+++ + +    G  A +         LC+  +FE 
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            +  +N + E G  P   +   +++GL K G++  A  + +++ + GV  ++  YN LI+
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    A+ ++  +     ++PN VTY+++I+  CK G+ D  L    +M +   +
Sbjct: 364 SMCKDGKLDEAESLFNNM-GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
              + Y S I G CK G +  A+ ++ EM+ +G+  + V Y ++I G+C+ G++   F L
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +  M  KG   N  ++  LI GL    ++ EA  ++  + E N   +  T+ VLI G CK
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G   +A ++L+E+ E G         LV          + YT   L++G     ++  A
Sbjct: 543 EGNTVRAFELLDEMVEKG---------LVP---------DTYTYRPLISGLCSTGRVSEA 584

Query: 418 IFLFKEMSRK--------GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
                ++  +        GC P VV+Y  LINGLCK+    +A    +EML     P+  
Sbjct: 585 REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+  ++ L     I+ A++L    L +GF  +   YNILI G C  G++++A ++  NM
Sbjct: 645 TYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 703

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                 P+ ++Y+T++    + GD  +A+++W  +L   + PD ++YN  + G C    +
Sbjct: 704 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 763

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRA--VMNNGAST 625
           + AFE  +D + RG+ P   T++ L+    +M++ +ST
Sbjct: 764 TKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 801



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 226/488 (46%), Gaps = 102/488 (20%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RL+M+  + P + T + ++NGL +  +F   L ++D                        
Sbjct: 169 RLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD------------------------ 204

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR---KGC-LNV 310
                      E+V SG+  D   Y A++   C   ++K+     EV+GR    GC L+V
Sbjct: 205 -----------EIVSSGLRPDVYVYTAVVRSLC---ELKDFIRAREVIGRMESSGCDLSV 250

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN+ IRGL +N +V EA+ I  LL  K   AD  T+  L+ GLCK        +++NE
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           + E G                 +G +  A  LVN++ K G   + +  N+L+N   +  K
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 414 LENAIFLFKEMSRKGCSP-----------------------------------TVVSYNT 438
           L+ A  LF  M  KG  P                                   TV  Y++
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+G CK+ +   A S   EM+  G KP+++ Y+ LI+G C+  ++  A +L  +   KG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            +P+   +  LI GLC A ++ +A +L+  M + N +PN VTYN L++G  K G+  +A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL--------CRGILPTTIT 610
           E+ + ++E+ L PD  +Y   + GLCS  R+S+A EF+ND            G LP  +T
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 611 WHILVRAV 618
           +  L+  +
Sbjct: 611 YTALINGL 618



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R  D   +V  M   G      T + ++NG I+  +   A+ LF E+   G  P V  Y 
Sbjct: 160 RELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYT 219

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            ++  LC+++ F  A   +  M   G    + TY++ I GLC+++++  A+++      K
Sbjct: 220 AVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYK 279

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   DV  Y  L+ GLC   + E   ++ + M +   VP+    + L+DGL K G+   A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++ N + +  + P +  YN  +  +C   ++ +A    N+   +G+ P  +T+ IL+ +
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 618 VMNNG 622
               G
Sbjct: 400 FCKRG 404


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 270/517 (52%), Gaps = 22/517 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     + C++ + ++A    N + EKG+ PD+  Y  +INGL ++G L    ++F    
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RGV+ +VV ++ ++D + + GD  +A E++ R++ E  + PNVVTY+++INGLC+ GR 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GISPNVVTYSILINGLCRNGRV 396

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E   ++ ++ K   E    TY S I G CK+ N+     +Y  M+  G   D V  + +
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 283 IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G  R G + E    + + + R   LN   +N LI G     +  + + ++ L+     
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV 516

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+ VL+ GL +                  +GRL +A +L  ++ K G   +    
Sbjct: 517 IPDVVTYTVLVKGLAE------------------QGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +L++GF +       + +FK M   G  P +  YN LIN   +          ++E+++
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKVE 520
            G +PD++TY+ +I G C  K    A+KL  + L+ G T P+   + ILI   C  G+++
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA+ ++S+M +R   PN++TY+ L+DG FKT + + A E++  +L +R+ P+I+SY+I +
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            GLC    M +A      A+ R +LP  I + IL+R 
Sbjct: 738 DGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 297/647 (45%), Gaps = 48/647 (7%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLF----HHILR-RLIDP------KLVVHVSR 59
           + +   NP +AL  F+ A    G  H    F    H +LR R+ DP      ++V     
Sbjct: 62  VFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGN 121

Query: 60  ILELIEIQKCY-----CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKR 114
           +  L E    +      P  V   ++  Y +N M D+A+D F  M+++ G          
Sbjct: 122 LEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKM-GVSISHYAASE 180

Query: 115 QFE------KAKRFLNSLWE--KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
             +      +    L +  E  KGL   VY +  V N  +K G++   L     + ERG+
Sbjct: 181 MLDLLIDSDRIDVILENYEEMCKGL--GVYEF--VFNSFLKRGEVEKGLNFHRALVERGL 236

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
              +V  N ++ G         A + ++ +V  +   PN+VT++ +IN  CK  R DE  
Sbjct: 237 VPKIVDCNKILKGLCMGNQIGVASDFFDMMV-RSGPSPNLVTFSTLINVYCKELRLDEAF 295

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +++ M +     D   Y   I+GL +AG +E    ++   +  G+ +D V +++++D +
Sbjct: 296 SLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAY 355

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            R G + +  E++  M ++G   NVV+Y+ILI GL  NG+V EA  ++  + ++      
Sbjct: 356 VRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSV 415

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+  LI+G CK+  L     +   +   G                 +G + +A     +
Sbjct: 416 LTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ 475

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
             K G  LN Y  N+L++G  +  +  + + ++  M      P VV+Y  L+ GL +  R
Sbjct: 476 AVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR 535

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA +   ++L+KG+ PD I Y  LI+G C+ +     L++       G  PD+ +YN+
Sbjct: 536 LDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI+     G VE+ L+L   + K    P++VTYNT++ G        KA++++  +   R
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +P+ I++ I +   C   RM DA    +  L RG  P  +T+  L+
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 185/397 (46%), Gaps = 40/397 (10%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVES-----------GIFVD-----AVTYNAMIDGF 286
           ++C   H L +    + A RV+  MV             G F +     +  Y+ ++  +
Sbjct: 91  SFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G +    + +  M + G  ++  + + ++  L+++ ++D  +           N + 
Sbjct: 151 CRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILE----------NYEE 200

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
              G+ +     N +L +      EVE+G    L    +LV R    G       CN ++
Sbjct: 201 MCKGLGVYEFVFNSFLKRG-----EVEKG----LNFHRALVER----GLVPKIVDCNKIL 247

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            G    +++  A   F  M R G SP +V+++TLIN  CK  R  EA+S    M+EKG  
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIV 307

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD++ YS+LINGL ++ K++    L    L +G   DV +++ ++      G +  A+++
Sbjct: 308 PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEV 367

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           Y+ M K    PN+VTY+ L++GL + G   +A  ++  IL++ L P +++Y+  + G C 
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK 427

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + D F      L +G +P  +   +L+  +   G
Sbjct: 428 SENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQG 464



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 1/185 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  + F KA +    L     +P+  ++  +I+   K G +  A+ +F  M ERG E N+
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y+ LIDG+FK  +   A E++E+++ +  V PN+V+Y+++I+GLCK G  +E    + 
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGD-RVSPNIVSYSILIDGLCKKGLMEEASLAFQ 754

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
                    D   Y   I G CK G +  A  +Y  M+ +GI  D +   A+ +   +  
Sbjct: 755 CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDS 814

Query: 291 KIKEC 295
           + K C
Sbjct: 815 QAKNC 819


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 270/517 (52%), Gaps = 22/517 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     + C++ + ++A    N + EKG+ PD+  Y  +INGL ++G L    ++F    
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RGV+ +VV ++ ++D + + GD  +A E++ R++ E  + PNVVTY+++INGLC+ GR 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GISPNVVTYSILINGLCRNGRV 396

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E   ++ ++ K   E    TY S I G CK+ N+     +Y  M+  G   D V  + +
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 283 IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G  R G + E    + + + R   LN   +N LI G     +  + + ++ L+     
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV 516

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+ VL+ GL +                  +GRL +A +L  ++ K G   +    
Sbjct: 517 IPDVVTYTVLVKGLAE------------------QGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +L++GF +       + +FK M   G  P +  YN LIN   +          ++E+++
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKVE 520
            G +PD++TY+ +I G C  K    A+KL  + L+ G T P+   + ILI   C  G+++
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA+ ++S+M +R   PN++TY+ L+DG FKT + + A E++  +L +R+ P+I+SY+I +
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            GLC    M +A      A+ R +LP  I + IL+R 
Sbjct: 738 DGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 297/647 (45%), Gaps = 48/647 (7%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLF----HHILR-RLIDP------KLVVHVSR 59
           + +   NP +AL  F+ A    G  H    F    H +LR R+ DP      ++V     
Sbjct: 62  VFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGN 121

Query: 60  ILELIEIQKCY-----CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKR 114
           +  L E    +      P  V   ++  Y +N M D+A+D F  M+++ G          
Sbjct: 122 LEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKM-GVSISHYAASE 180

Query: 115 QFE------KAKRFLNSLWE--KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
             +      +    L +  E  KGL   VY +  V N  +K G++   L     + ERG+
Sbjct: 181 MLDLLIDSDRIDVILENYEEMCKGL--GVYEF--VFNSFLKRGEVEKGLNFHRALVERGL 236

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
              +V  N ++ G         A + ++ +V  +   PN+VT++ +IN  CK  R DE  
Sbjct: 237 VPKIVDCNKILKGLCMGNQIGVASDFFDMMV-RSGPSPNLVTFSTLINVYCKELRLDEAF 295

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +++ M +     D   Y   I+GL +AG +E    ++   +  G+ +D V +++++D +
Sbjct: 296 SLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAY 355

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            R G + +  E++  M ++G   NVV+Y+ILI GL  NG+V EA  ++  + ++      
Sbjct: 356 VRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSV 415

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+  LI+G CK+  L     +   +   G                 +G + +A     +
Sbjct: 416 LTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ 475

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
             K G  LN Y  N+L++G  +  +  + + ++  M      P VV+Y  L+ GL +  R
Sbjct: 476 AVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR 535

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA +   ++L+KG+ PD I Y  LI+G C+ +     L++       G  PD+ +YN+
Sbjct: 536 LDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI+     G VE+ L+L   + K    P++VTYNT++ G        KA++++  +   R
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +P+ I++ I +   C   RM DA    +  L RG  P  +T+  L+
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 185/397 (46%), Gaps = 40/397 (10%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVES-----------GIFVD-----AVTYNAMIDGF 286
           ++C   H L +    + A RV+  MV             G F +     +  Y+ ++  +
Sbjct: 91  SFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G +    + +  M + G  ++  + + ++  L+++ ++D  +           N + 
Sbjct: 151 CRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILE----------NYEE 200

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
              G+ +     N +L +      EVE+G    L    +LV R    G       CN ++
Sbjct: 201 MCKGLGVYEFVFNSFLKRG-----EVEKG----LNFHRALVER----GLVPKIVDCNKIL 247

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            G    +++  A   F  M R G SP +V+++TLIN  CK  R  EA+S    M+EKG  
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIV 307

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD++ YS+LINGL ++ K++    L    L +G   DV +++ ++      G +  A+++
Sbjct: 308 PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEV 367

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           Y+ M K    PN+VTY+ L++GL + G   +A  ++  IL++ L P +++Y+  + G C 
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK 427

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + D F      L +G +P  +   +L+  +   G
Sbjct: 428 SENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQG 464



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 2/177 (1%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  + F KA +    L     +P+  ++  +I+   K G +  A+ +F  M ERG E N+
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y+ LIDG+FK  +   A E++E+++ +  V PN+V+Y+++I+GLCK G  +E    + 
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGD-RVSPNIVSYSILIDGLCKKGLMEEASLAFQ 754

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID-GF 286
                    D   Y   I G CK G +  A  +Y  M+ +GI  D +   A+ + GF
Sbjct: 755 CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGF 811


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 263/543 (48%), Gaps = 31/543 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGT 140
           A+D+  R     GC   +         LC + + ++A   L  + + G    PDV SY T
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VING  K GDL  A   + EM +RG+  NVV Y+ +I    K     +A E+   +V + 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV-KN 263

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V PN  TYN +++G C  G+  E +    +M  +  E D  TY S +  LCK G    A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   N   ++ILI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + GKVD+A+ ++  +R++  N D+ T+G +I  LCK+G                  R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG------------------RV 425

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA     +M            NSL++      K + A  L  EM  +G     + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+  CK  R  E+      M+  G KPD+ITYS LI+G C + K+D A KL    +  G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD   YN LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  I E   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A++
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 620 NNG 622
             G
Sbjct: 666 KVG 668



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 268/549 (48%), Gaps = 26/549 (4%)

Query: 98  RMNEIFG--CEAGILCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLL 152
           R   I+G  C    + R        R+ N +   G   + P++ +YG +I     +G L 
Sbjct: 50  RGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
              A    + ++G   + + +  L+ G         A +I  R + +    PNV +YN++
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 213 INGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           + GLC   R  E LE+   M  +  +   D  +Y + I+G  K G+++ A   Y EM++ 
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  + VTY+++I   C+A  + +  E+   M + G + N  +YN ++ G   +G+  EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I   + +       D  T+  L++ LCKNG   +A ++ + + + G              
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L +   L++ M ++G   N Y  + L+  + +  K++ A+ +F +M ++G +P 
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y T+I  LCK  R  +A  + ++M+++   P  I Y+ LI+ LC   K D A +L  
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + L +G   D   +N +I   C  G+V ++ +L+  M +    P+++TY+TL+DG    G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+A ++   ++   ++PD ++YN  + G C  SRM DA     +    G+ P  IT++
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 613 ILVRAVMNN 621
           I+++ +   
Sbjct: 589 IILQGLFQT 597



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---------------VIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V  S               ++  Y  
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M+   G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 282 SGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  N   ++ILI  + K+G   +A  ++ ++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + P+ VTY  +I  LCK GR ++ +  +++M        +  Y S IH LC    
Sbjct: 401 -RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + A+ +  EM++ GI +D + +N++ID  C+ G++ E  +L+++M R G   ++++Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING CK                  
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK------------------ 561

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 556 KA 557
           +A
Sbjct: 742 RA 743



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 25/468 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V PN+ TY +
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C  GR D        + K     D+  +   + GLC       A + V R M + 
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGLLENGKVD 327
           G   +  +YN ++ G C   + +E  EL ++M   G     +VVSY  +I G  + G +D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A   +  + ++    +  T+  +I  LCK   ++KA+++L                   
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS----------------- 259

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK  
Sbjct: 260 -MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  P+  +++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+ A+ ++S M+++   P+ VTY T++  L K+G  + A+  +  +++E
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           RL P  I YN  +  LC   +   A E + + L RGI   TI ++ ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVS 435
           GRL    + +  + K G +++A     L+ G     +  +A+  + + M++ GC P V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           YN L+ GLC   R  EA   ++ M + G    PD+++Y+ +ING  +   +D A     +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G  P+V  Y+ +I  LC A  ++ A+++ ++M K   +PN  TYN+++ G   +G 
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A+     +  + + PD+++YN  +  LC   R ++A +  +    RG+ P   T+  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 614 LVRAVMNNGA 623
           L++     GA
Sbjct: 345 LLQGYATKGA 354



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 187/464 (40%), Gaps = 83/464 (17%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS T+  G       +  +L+       +V +  +L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           +L+ ++    P     S+ I AY K    D+A+ VF +M +         +G   GILC+
Sbjct: 363 DLM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 113 KRQFEKAKRFLNSLWEKGLKP-----------------------------------DVYS 137
             + E A R+   + ++ L P                                   D   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           + ++I+   K G ++ +  +FD M   GV+ +++ Y+ LIDG+   G    A ++   +V
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ VTYN +ING CK  R ++ L ++  M+ +    D  TY   + GL +    
Sbjct: 542 -SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A+ +Y  + ESG  ++  TYN ++ G C+     E   +++ +      L   ++NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 317 IRGLLENGKVDEAISIWELL-----------------------------------REKNC 341
           I  LL+ G+ DEA  ++  L                                    E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            A+S     ++  L + G + +A   L  ++E      A  ASL
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASL 764



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G      N  T   L+     A +L+        + +KG     +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M + G  P++ +Y++L+ GLC   +   AL+L     
Sbjct: 130 TPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189

Query: 496 QKGF--TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             G    PDV  Y  +I+G    G ++ A   Y  M  R  +PN+VTY++++  L K   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+E+   +++  + P+  +YN  + G CS  +  +A  FL      G+ P  +T++ 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 614 LVRAVMNNGAST 625
           L+  +  NG  T
Sbjct: 310 LMDYLCKNGRCT 321



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYC----- 71
           ++ DS  +E     S  LF  ++R  + P ++ + + I       ++ E  K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 72  ---PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
              P+ V   ++I  Y K S  + AL +F+ M E  G    I         L + R+   
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK     + E G + ++ +Y  +++GL K+     AL +F  +    ++     +NI+I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    AK+++  L     + P+V TY++M   L + G  +E  +++  M++N   
Sbjct: 663 ALLKVGRNDEAKDLFAALS-ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +S    S +  L + G++  A      + E    ++A T +  +D     GK +E
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQE 776


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 254/487 (52%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  ++  LVK      A+++F +M  +G+E ++   NILI+ F   G    +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    PN +T N ++ GLC  G   + L   D++     + D  +Y + ++GLC
Sbjct: 68  LGK-ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G    A ++ R + +     + V YN +IDG C+   + E ++L+  M  +G   NV+
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI G    G++ EA  +   +  KN N +  T+ +L++ LCK              
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCK-------------- 232

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A +L+  M K G K N  + N+LM+G+    +++NA  +F  M +KG +P
Sbjct: 233 ----EGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SYN +I+ LCK +R  EA + ++E+L K   P+ +TYS LI+G C+  +I  AL L 
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y  L+  LC    ++ A  L+  MK+R   PN  TY  L+DGL K 
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A +++ H+L +  R ++ +YN+ + GLC    + +A    +     G +P  +T+
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468

Query: 612 HILVRAV 618
            I++R++
Sbjct: 469 EIIIRSL 475



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 258/504 (51%), Gaps = 20/504 (3%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G L + + +  A      +  KG++PD+++   +IN     G +  +  V  ++ 
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G + N +  N L+ G   KG+  ++    +++V +     + V+Y  ++NGLCK G  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ-GFQMDQVSYATLLNGLCKIGET 131

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              L++   ++      +   Y + I GLCK   V  A  +Y EM   GIF + +TY+ +
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC AG++ E F L   M  K    NV +Y IL+  L + GKV EA ++  ++ ++  
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  ++  L++G C          ++ EV+        +A  + + M + G   N Y+ 
Sbjct: 252 KPNVVSYNTLMDGYC----------LIGEVQ--------NAKQMFHTMVQKGVNPNVYSY 293

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N +++   ++ +++ A+ L +E+  K   P  V+Y++LI+G CK+ R   A   +KEM  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G   D++TY+ L++ LC+++ +D A  L  +  ++G  P+   Y  LI GLC  G+ ++
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKN 413

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A +L+ ++  + C  N+ TYN ++ GL K G  D+AL + + + E    PD +++ I ++
Sbjct: 414 AQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIR 473

Query: 582 GLCSCSRMSDAFEFLNDALCRGIL 605
            L    +   A + L++ + + +L
Sbjct: 474 SLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 223/451 (49%), Gaps = 20/451 (4%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N ++    K   Y  A  +++++ ++  + P++ T N++IN  C  G+      +  ++
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVK-GIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   + ++ T  + + GLC  G V+ +   + ++V  G  +D V+Y  +++G C+ G+ 
Sbjct: 72  LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET 131

Query: 293 KECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +   +L  ++  R    NVV YN +I GL ++  V+EA  ++  +  +    +  T+  L
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I G C                    G+L +A  L+N M       N YT   LM+   + 
Sbjct: 192 IYGFCL------------------AGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKE 233

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K++ A  L   M+++G  P VVSYNTL++G C +     A      M++KG  P++ +Y
Sbjct: 234 GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +++I+ LC+SK++D A+ L  + L K   P+   Y+ LI G C  G++  AL L   M  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R    ++VTY +L+D L K  + DKA  ++  + E  ++P+  +Y   + GLC   R  +
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKN 413

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A +     L +G      T+++++  +   G
Sbjct: 414 AQKLFQHLLVKGCRINVWTYNVMISGLCKEG 444



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 161/312 (51%), Gaps = 20/312 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLN 124
           ++I    K+ + ++A D++  M+              I+G      C   Q  +A   LN
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYG-----FCLAGQLMEAFGLLN 209

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +  K + P+VY+Y  +++ L K G +  A  +   M + GV+ NVV YN L+DG+   G
Sbjct: 210 EMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIG 269

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
           +   AK+++  +V +  V PNV +YN+MI+ LCK  R DE + +   +       ++ TY
Sbjct: 270 EVQNAKQMFHTMV-QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S I G CK G +  A  + +EM   G   D VTY +++D  C+   + +   L+  M  
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           +G   N  +Y  LI GL + G+   A  +++ L  K C  +  T+ V+I+GLCK G L++
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDE 448

Query: 364 AIQILNEVEEGG 375
           A+ + +++EE G
Sbjct: 449 ALAMKSKMEENG 460



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 104/186 (55%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P ++ +N ++  L K++ +  A S  K+M  KG +PD+ T ++LIN  C   ++  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + L+ G+ P+    N L+ GLC  G+V+ +L  +  +  +    + V+Y TL++GL 
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G+   AL++   I +   RP+++ YN  + GLC    +++A++  ++   RGI P  I
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 610 TWHILV 615
           T+  L+
Sbjct: 187 TYSTLI 192



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/125 (20%), Positives = 55/125 (44%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           TP +  +N ++  L        A+ L+  M+ +   P+L T N L++     G    +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +   IL+   +P+ I+ N  +KGLC    +  +  F +  + +G     +++  L+  + 
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 620 NNGAS 624
             G +
Sbjct: 127 KIGET 131


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 278/553 (50%), Gaps = 18/553 (3%)

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------LC--- 111
           L LIE ++      +   +I    + S+ ++A+D   RM     C   +      LC   
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS-SSCIPNVVTYRILLCGCL 345

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RKRQ  + KR L+ +  +G  P    + ++I+   +SGD   A  +  +M + G +   V
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 172 CYNILIDGF-----FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
            YNILI G          D +   E     +++  V  N V  + +   LC  G+F++  
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M       D+ TY   I  LC A  V+ A  ++ EM  + +  D  TY  +ID F
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G +++  + ++ M R GC  NVV+Y  LI   L+  K+  A  ++E++  + C  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  LI+G CK+G + KA QI   +   G   + D        D +    N +T  +L+
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  +A K++ A  L   MS +GC P  + Y+ LI+G CKV +  EA     +M E+G+ 
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TYS LI+ L + K++D+ALK+  + L+    P+V +Y  +I GLC  GK ++A +L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            S M+++ C PN+VTY  ++DG  K G  DK LE+   +  +   P+ ++Y + +   C+
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 586 CSRMSDAFEFLND 598
              + DA + L++
Sbjct: 824 AGLLDDAHQLLDE 836



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 262/530 (49%), Gaps = 41/530 (7%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G+LC   + + A      +    + PDV++Y  +I+   K G L  A   FDEM   G  
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K      A E++E ++ E  + PNVVTY  +I+G CK G+ ++  +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQ 606

Query: 228 MWDRMKKNE----------------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM+ N                 R+ + FTY + + GLCKA  V+ A  +   M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+ GK+ E   ++  M  +G   NV +Y+ LI  L ++ ++D A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GLCK G  ++A ++++ +EE                 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE----------------- 769

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             GC  N  T  ++++GF +A K++  + L ++M  KGC+P  V+Y  LIN  C      
Sbjct: 770 -KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+  + EM +  W   M  Y  +I G   +++  ++L L  +  +    P +  Y ILI
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 511 HGLCSAGKVEDALQLYSNMKK--RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
              C AG++E AL+L+  M         +   Y++L++ L      DKA E++  +++  
Sbjct: 887 DSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             P++  +   +KGL   +R  +A + L+D +C+ +  +  +  IL  A+
Sbjct: 947 GIPELSIFFYLVKGLIRINRWEEALQ-LSDCICQMVHVSNSSSLILKHAI 995



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/695 (23%), Positives = 305/695 (43%), Gaps = 95/695 (13%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFH----------------HILRRLIDP 51
           ++++L   KNP   +  F  A R+ GY H+  ++H                  LR + D 
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE 191

Query: 52  KLVVHVSRILELIEIQKC--------------------YCPEDVAL-SVIQAYGKNSMPD 90
              + + ++L ++ I+KC                    Y P  +   ++++ + +    D
Sbjct: 192 DKEI-LGKLLNVL-IRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLD 249

Query: 91  KALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            A  V + M++          GC   +LC+  ++ +A   L  + ++  K D   Y  +I
Sbjct: 250 TAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMI 306

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL ++     A+     M       NVV Y IL+ G  +K    R K I   ++ E   
Sbjct: 307 SGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE-GC 365

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN------ 256
           YP+   +N +I+  C+ G +    ++  +M     +     Y   I G+C  GN      
Sbjct: 366 YPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSL 423

Query: 257 --VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
             +E AE+ Y EM+++ + ++ V  + +    C AGK ++ + +   M  KG +   S  
Sbjct: 424 DVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTY 483

Query: 315 ILIRGLLENG-KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             + GLL N  KVD A  ++E ++  +   D  T+ +LI+  CK G L +A +  +E+  
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                   +++ A  L   M   GC  N  T  +L++G  ++ ++E 
Sbjct: 544 DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603

Query: 417 AIFLFKEMSRKGC----------------SPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           A  ++  M                      P + +Y  L++GLCK  +  EA   +  M 
Sbjct: 604 ACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            +G +P+ I Y  LI+G C+  K+D A  +  +  ++G+ P+V  Y+ LI  L    +++
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL++ S M + +C PN++ Y  ++DGL K G  D+A  + + + E+   P++++Y   +
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            G     ++    E +     +G  P  +T+ +L+
Sbjct: 784 DGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 26/419 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           NV+I   C+ G ++  LE   R+K    +    TY + +    +A  ++ A  V+REM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           SG  +D  T    +   C+AG+ +E   L E    K  L+ V Y  +I GL E    +EA
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK--LDTVIYTQMISGLCEASLFEEA 318

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +     +R  +C  +  T+ +L+ G  +   L +  +IL+                   M
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILS------------------MM 360

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC  +    NSL++ + ++     A  L K+M   GC P  V YN LI G+C  E+ 
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 450 GE------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
                   A     EML+     + +  S L   LC + K + A  +  + + KGF PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
           + Y+ +I  LC+A KV++A  L+  MK  + VP++ TY  L+D   K G   +A + ++ 
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ +   P++++Y   +       +MS A E     L  G +P  +T+  L+     +G
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 32/242 (13%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
           R++ ++E + C+       ++I  +GK    DK L++ ++M                   
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG------------------ 803

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
                     KG  P+  +Y  +IN    +G L  A  + DEM +     ++  Y  +I+
Sbjct: 804 ---------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK--NE 236
           GF +  +++ +  + + +    +V P +  Y ++I+  CK GR +  LE+   M    + 
Sbjct: 855 GFNR--EFIISLGLLDEIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y S I  L  A  V+ A  +Y +M++ G   +   +  ++ G  R  + +E  
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971

Query: 297 EL 298
           +L
Sbjct: 972 QL 973


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/626 (26%), Positives = 293/626 (46%), Gaps = 84/626 (13%)

Query: 32  PGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDK 91
           PG   +       +RRL     V  V   L+ + ++   C E   ++ + A+ +   PD+
Sbjct: 49  PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDR 108

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           AL  F R     GC                       +  +P +Y++  +I+ L++   +
Sbjct: 109 ALKTFYRAVHDLGCA----------------------RPTEPRLYNH--LIDALLRENMV 144

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
              + V+D M + GV  NV  YN+L+    +      A+++ + +  +    P+ VTY  
Sbjct: 145 GAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARK-GCPPDDVTYAT 203

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +++ LCK  R DE  E+   M        + +Y + +  LC+   ++    V  +MV  G
Sbjct: 204 IVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRG 258

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
           +  + +TY  ++D FC+AG+++    +   M   GC  NVV++  L+RGL ++G+V +A+
Sbjct: 259 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 318

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +W  +  +     + ++ +LI GLC                    G L  A+S++N M+
Sbjct: 319 DMWRWMVAEGWAPSTVSYNILIRGLCS------------------VGDLKGASSILNSME 360

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +HGC  N  T ++L++GF +A  L  AI ++ +MSR GC P VV Y  +++  CK   F 
Sbjct: 361 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 420

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A S + +ML +   P+ +T++ LI  LC  +++  AL +  +  + G  P+   YN LI
Sbjct: 421 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 480

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           HGL   G   DAL + + M+      +LVTYNT++ GL +T    +A+     ++ + ++
Sbjct: 481 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 540

Query: 571 PD-----------------------------------IISYNITLKGLCSCSRMSDAFEF 595
           P+                                   I+ Y I +  LC+  ++ DA  +
Sbjct: 541 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 600

Query: 596 LNDALCRGILPTTITWHILVRAVMNN 621
           L   L  GI P T+TW++LVR V  N
Sbjct: 601 LLKMLYEGIYPNTVTWNVLVRGVFRN 626


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 278/553 (50%), Gaps = 18/553 (3%)

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------LC--- 111
           L LIE ++      +   +I    + S+ ++A+D   RM     C   +      LC   
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSS-SCIPNVVTYRILLCGCL 345

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RKRQ  + KR L+ +  +G  P    + ++I+   +SGD   A  +  +M + G +   V
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 172 CYNILIDGF-----FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
            YNILI G          D +   E     +++  V  N V  + +   LC  G+F++  
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M       D+ TY   I  LC A  V+ A  ++ EM  + +  D  TY  +ID F
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G +++  + ++ M R GC  NVV+Y  LI   L+  K+  A  ++E++  + C  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  LI+G CK+G + KA QI   +   G   + D        D +    N +T  +L+
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  +A K++ A  L   MS +GC P  + Y+ LI+G CKV +  EA     +M E+G+ 
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TYS LI+ L + K++D+ALK+  + L+    P+V +Y  +I GLC  GK ++A +L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            S M+++ C PN+VTY  ++DG  K G  DK LE+   +  +   P+ ++Y + +   C+
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 586 CSRMSDAFEFLND 598
              + DA + L++
Sbjct: 824 AGLLDDAHQLLDE 836



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 246/500 (49%), Gaps = 40/500 (8%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G+LC   + + A      +    + PDV++Y  +I+   K G L  A   FDEM   G  
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K      A E++E ++ E  + PNVVTY  +I+G CK G+ ++  +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQ 606

Query: 228 MWDRMKKNE----------------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM+ N                 R+ + FTY + + GLCKA  V+ A  +   M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+ GK+ E   ++  M  +G   NV +Y+ LI  L ++ ++D A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GLCK G  ++A ++++ +EE                 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE----------------- 769

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             GC  N  T  ++++GF +A K++  + L ++M  KGC+P  V+Y  LIN  C      
Sbjct: 770 -KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+  + EM +  W   M  Y  +I G   +++  ++L L  +  +    P +  Y ILI
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 511 HGLCSAGKVEDALQLYSNMKK--RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
              C AG++E AL+L+  M         +   Y++L++ L      DKA E++  +++  
Sbjct: 887 DSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 569 LRPDIISYNITLKGLCSCSR 588
             P++  +   +KGL   +R
Sbjct: 947 GIPELSIFFYLVKGLIRINR 966



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 164/664 (24%), Positives = 278/664 (41%), Gaps = 85/664 (12%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++++L   KNP   +  F  A R+ GY H+  ++H +L                      
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLE--------------------- 170

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKAL-DVFQRMNEIFGCEAGIL----CRKRQFEKAKRF 122
                      V+   G + +P++ L ++     EI G    +L    CR   +  A   
Sbjct: 171 -----------VLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEE 219

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  L + G KP   +Y  ++   +++  L  A  V  EM + G   +       +    K
Sbjct: 220 LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G +  A  + E+   +     + V Y  MI+GLC+   F+E ++   RM+ +    +  
Sbjct: 280 AGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   + G  +   +   +R+   M+  G +     +N++I  +CR+G     ++L + M
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL--------IN 353
           G  GC    V YNILI G+  N K+  ++ + EL  EK        H VL          
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKL-PSLDVLEL-AEKAYGEMLDAHVVLNKVNVSNLAR 453

Query: 354 GLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKL 396
            LC  G   KA  I+ E+   G                   ++ +A  L   M  +    
Sbjct: 454 CLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           + +T   L++ F +   L+ A   F EM R GC+P VV+Y  LI+   K  +   A    
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY---------- 506
           + ML +G  P+++TY+ LI+G C+S +I+ A ++  +       PDV MY          
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633

Query: 507 -NI-----LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            NI     L+ GLC A KV++A  L   M    C PN + Y+ L+DG  K G  D+A  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  + E    P++ +Y+  +  L    R+  A + L+  L     P  I +  ++  +  
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 621 NGAS 624
            G +
Sbjct: 754 VGKT 757



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 33/243 (13%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
           R++ ++E + C+       ++I  +GK    DK L++ ++M                   
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG------------------ 803

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
                     KG  P+  +Y  +IN    +G L  A  + DEM +     ++  Y  +I+
Sbjct: 804 ---------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK--NE 236
           GF +  +++ +  + + +    +V P +  Y ++I+  CK GR +  LE+   M    + 
Sbjct: 855 GFNR--EFIISLGLLDEIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKXMSSCTSY 911

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y S I  L  A  V+ A  +Y +M++ G   +   +  ++ G  R  +   C 
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRTL-CX 970

Query: 297 ELW 299
             W
Sbjct: 971 TTW 973


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 278/553 (50%), Gaps = 18/553 (3%)

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------LC--- 111
           L LIE ++      +   +I    + S+ ++A+D   RM     C   +      LC   
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSS-SCIPNVVTYRILLCGCL 345

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RKRQ  + KR L+ +  +G  P    + ++I+   +SGD   A  +  +M + G +   V
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 172 CYNILIDGF-----FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
            YNILI G          D +   E     +++  V  N V  + +   LC  G+F++  
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M       D+ TY   I  LC A  V+ A  ++ EM  + +  D  TY  +ID F
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G +++  + ++ M R GC  NVV+Y  LI   L+  K+  A  ++E++  + C  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  LI+G CK+G + KA QI   +   G   + D        D +    N +T  +L+
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  +A K++ A  L   MS +GC P  + Y+ LI+G CKV +  EA     +M E+G+ 
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TYS LI+ L + K++D+ALK+  + L+    P+V +Y  +I GLC  GK ++A +L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            S M+++ C PN+VTY  ++DG  K G  DK LE+   +  +   P+ ++Y + +   C+
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 586 CSRMSDAFEFLND 598
              + DA + L++
Sbjct: 824 AGLLDDAHQLLDE 836



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 255/514 (49%), Gaps = 41/514 (7%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G+LC   + + A      +    + PDV++Y  +I+   K G L  A   FDEM   G  
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K      A E++E ++ E  + PNVVTY  +I+G CK G+ ++  +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQ 606

Query: 228 MWDRMKKNE----------------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM+ N                 R+ + FTY + + GLCKA  V+ A  +   M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+ GK+ E   ++  M  +G   NV +Y+ LI  L ++ ++D A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GLCK G  ++A ++++ +EE                 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE----------------- 769

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             GC  N  T  ++++GF +A K++  + L ++M  KGC+P  V+Y  LIN  C      
Sbjct: 770 -KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+  + EM +  W   M  Y  +I G   +++  ++L L  +  +    P +  Y ILI
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 511 HGLCSAGKVEDALQLYSNMKK--RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
              C AG++E AL+L+  M         +   Y++L++ L      DKA E++  +++  
Sbjct: 887 DSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
             P++  +   +KGL   +R  +A + L+D +C+
Sbjct: 947 GIPELSIFFYLVKGLIRINRWEEALQ-LSDCICQ 979



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/695 (23%), Positives = 305/695 (43%), Gaps = 95/695 (13%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFH----------------HILRRLIDP 51
           ++++L   KNP   +  F  A R+ GY H+  ++H                  LR + D 
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE 191

Query: 52  KLVVHVSRILELIEIQKC--------------------YCPEDVAL-SVIQAYGKNSMPD 90
              + + ++L ++ I+KC                    Y P  +   ++++ + +    D
Sbjct: 192 DKEI-LGKLLNVL-IRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLD 249

Query: 91  KALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            A  V + M++          GC   +LC+  ++ +A   L  + ++  K D   Y  +I
Sbjct: 250 TAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMI 306

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL ++     A+     M       NVV Y IL+ G  +K    R K I   ++ E   
Sbjct: 307 SGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE-GC 365

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN------ 256
           YP+   +N +I+  C+ G +    ++  +M     +     Y   I G+C  GN      
Sbjct: 366 YPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSL 423

Query: 257 --VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
             +E AE+ Y EM+++ + ++ V  + +    C AGK ++ + +   M  KG +   S  
Sbjct: 424 DVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTY 483

Query: 315 ILIRGLLENG-KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             + GLL N  KVD A  ++E ++  +   D  T+ +LI+  CK G L +A +  +E+  
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                   +++ A  L   M   GC  N  T  +L++G  ++ ++E 
Sbjct: 544 DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603

Query: 417 AIFLFKEMSRKGC----------------SPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           A  ++  M                      P + +Y  L++GLCK  +  EA   +  M 
Sbjct: 604 ACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            +G +P+ I Y  LI+G C+  K+D A  +  +  ++G+ P+V  Y+ LI  L    +++
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL++ S M + +C PN++ Y  ++DGL K G  D+A  + + + E+   P++++Y   +
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            G     ++    E +     +G  P  +T+ +L+
Sbjct: 784 DGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 26/419 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           NV+I   C+ G ++  LE   R+K    +    TY + +    +A  ++ A  V+REM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           SG  +D  T    +   C+AG+ +E   L E    K  L+ V Y  +I GL E    +EA
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK--LDTVIYTQMISGLCEASLFEEA 318

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +     +R  +C  +  T+ +L+ G  +   L +  +IL+                   M
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILS------------------MM 360

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC  +    NSL++ + ++     A  L K+M   GC P  V YN LI G+C  E+ 
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 450 GE------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
                   A     EML+     + +  S L   LC + K + A  +  + + KGF PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
           + Y+ +I  LC+A KV++A  L+  MK  + VP++ TY  L+D   K G   +A + ++ 
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ +   P++++Y   +       +MS A E     L  G +P  +T+  L+     +G
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 32/242 (13%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
           R++ ++E + C+       ++I  +GK    DK L++ ++M                   
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG------------------ 803

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
                     KG  P+  +Y  +IN    +G L  A  + DEM +     ++  Y  +I+
Sbjct: 804 ---------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK--NE 236
           GF +  +++ +  + + +    +V P +  Y ++I+  CK GR +  LE+   M    + 
Sbjct: 855 GFNR--EFIISLGLLDEIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y S I  L  A  V+ A  +Y +M++ G   +   +  ++ G  R  + +E  
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971

Query: 297 EL 298
           +L
Sbjct: 972 QL 973


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 263/543 (48%), Gaps = 31/543 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGT 140
           A+D+  R     GC   +         LC + + ++A   L  + + G    PDV SY T
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VING  K GDL  A   + EM +RG+  NVV YN +I    K     +A E+   +V + 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMV-KN 263

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V PN  TYN +++G C  G+  E +    +M  +  E D  TY S +  LCK G    A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   N   ++ILI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + GKVD+A+ ++  +R++  N D+ T+G +I  LCK+G                  R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG------------------RV 425

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA     +M            NSL++      K + A  L  EM  +G     + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+  CK  R  E+      M+  G KP++ITYS LI+G C + K+D A KL    +  G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD   YN LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  I E   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A++
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 620 NNG 622
             G
Sbjct: 666 KVG 668



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 268/549 (48%), Gaps = 26/549 (4%)

Query: 98  RMNEIFG--CEAGILCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLL 152
           R   I+G  C    + R        R+ N +   G   + P++ +YG +I     +G L 
Sbjct: 50  RGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
              A    + ++G   + + +  L+ G         A +I  R + +    PNV +YN++
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 213 INGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           + GLC   R  E LE+   M  +  +   D  +Y + I+G  K G+++ A   Y EM++ 
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  + VTYN++I   C+A  + +  E+   M + G + N  +YN ++ G   +G+  EA
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I   + +       D  T+  L++ LCKNG   +A ++ + + + G              
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L +   L++ M ++G   N Y  + L+  + +  K++ A+ +F +M ++G +P 
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y T+I  LCK  R  +A  + ++M+++   P  I Y+ LI+ LC   K D A +L  
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + L +G   D   +N +I   C  G+V ++ +L+  M +    PN++TY+TL+DG    G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+A ++   ++   ++PD ++YN  + G C  SRM DA     +    G+ P  IT++
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 613 ILVRAVMNN 621
           I+++ +   
Sbjct: 589 IILQGLFQT 597



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---------------VIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V  S               ++  Y  
Sbjct: 222 YHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M+   G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 282 SGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  N   ++ILI  + K+G   +A  ++ ++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + P+ VTY  +I  LCK GR ++ +  +++M        +  Y S IH LC    
Sbjct: 401 -RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + A+ +  EM++ GI +D + +N++ID  C+ G++ E  +L+++M R G   N+++Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING CK                  
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK------------------ 561

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 556 KA 557
           +A
Sbjct: 742 RA 743



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 25/468 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V PN+ TY +
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C  GR D        + K     D+  +   + GLC       A + V R M + 
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGLLENGKVD 327
           G   +  +YN ++ G C   + +E  EL ++M   G     +VVSY  +I G  + G +D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A   +  + ++    +  T+  +I  LCK   ++KA+++L                   
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTS----------------- 259

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK  
Sbjct: 260 -MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  P+  +++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+ A+ ++S M+++   P+ VTY T++  L K+G  + A+  +  +++E
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           RL P  I YN  +  LC   +   A E + + L RGI   TI ++ ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVS 435
           GRL    + +  + K G +++A     L+ G     +  +A+  + + M++ GC P V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           YN L+ GLC   R  EA   ++ M + G    PD+++Y+ +ING  +   +D A     +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G  P+V  YN +I  LC A  ++ A+++ ++M K   +PN  TYN+++ G   +G 
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A+     +  + + PD+++YN  +  LC   R ++A +  +    RG+ P   T+  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 614 LVRAVMNNGA 623
           L++     GA
Sbjct: 345 LLQGYATKGA 354



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 187/464 (40%), Gaps = 83/464 (17%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS T+  G       +  +L+       +V +  +L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           +L+ ++    P     S+ I AY K    D+A+ VF +M +         +G   GILC+
Sbjct: 363 DLM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 113 KRQFEKAKRFLNSLWEKGLKP-----------------------------------DVYS 137
             + E A R+   + ++ L P                                   D   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           + ++I+   K G ++ +  +FD M   GV+ N++ Y+ LIDG+   G    A ++   +V
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ VTYN +ING CK  R ++ L ++  M+ +    D  TY   + GL +    
Sbjct: 542 -SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A+ +Y  + ESG  ++  TYN ++ G C+     E   +++ +      L   ++NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 317 IRGLLENGKVDEAISIWELL-----------------------------------REKNC 341
           I  LL+ G+ DEA  ++  L                                    E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            A+S     ++  L + G + +A   L  ++E      A  ASL
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASL 764



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G      N  T   L+     A +L+        + +KG     +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M + G  P++ +Y++L+ GLC   +   AL+L     
Sbjct: 130 TPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189

Query: 496 QKGF--TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             G    PDV  Y  +I+G    G ++ A   Y  M  R  +PN+VTYN+++  L K   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQA 249

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+E+   +++  + P+  +YN  + G CS  +  +A  FL      G+ P  +T++ 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 614 LVRAVMNNGAST 625
           L+  +  NG  T
Sbjct: 310 LMDYLCKNGRCT 321



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYC----- 71
           ++ DS  +E     S  LF  ++R  + P ++ + + I       ++ E  K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 72  ---PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
              P+ V   ++I  Y K S  + AL +F+ M E  G    I         L + R+   
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK     + E G + ++ +Y  +++GL K+     AL +F  +    ++     +NI+I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    AK+++  L     + P+V TY++M   L + G  +E  +++  M++N   
Sbjct: 663 ALLKVGRNDEAKDLFAALS-ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +S    S +  L + G++  A      + E    ++A T +  +D     GK +E
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQE 776


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 263/543 (48%), Gaps = 31/543 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGT 140
           A+D+  R     GC   +         LC + + ++A   L  + + G    PDV SY T
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VING  K GDL  A   + EM +RG+  NVV Y+ +I    K     +A E+   +V + 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV-KN 263

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V PN  TYN +++G C  G+  E +    +M  +  E D  TY S +  LCK G    A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   N   ++ILI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + GKVD+A+ ++  +R++  N D+ T+G +I  LCK+G                  R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG------------------RV 425

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA     +M            NSL++      K + A  L  EM  +G     + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+  CK  R  E+      M+  G KPD+ITYS LI+G C + K+D A KL    +  G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD   YN LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  I E   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A++
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 620 NNG 622
             G
Sbjct: 666 KVG 668



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 268/549 (48%), Gaps = 26/549 (4%)

Query: 98  RMNEIFG--CEAGILCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLL 152
           R   I+G  C    + R        R+ N +   G   + P++ +YG +I     +G L 
Sbjct: 50  RGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
              A    + ++G   + + +  L+ G         A +I  R + +    PNV +YN++
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 213 INGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           + GLC   R  E LE+   M  +  +   D  +Y + I+G  K G+++ A   Y EM++ 
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  + VTY+++I   C+A  + +  E+   M + G + N  +YN ++ G   +G+  EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I   + +       D  T+  L++ LCKNG   +A ++ + + + G              
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L +   L++ M ++G   N Y  + L+  + +  K++ A+ +F +M ++G +P 
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y T+I  LCK  R  +A  + ++M+++   P  I Y+ LI+ LC   K D A +L  
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + L +G   D   +N +I   C  G+V ++ +L+  M +    P+++TY+TL+DG    G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+A ++   ++   ++PD ++YN  + G C  SRM DA     +    G+ P  IT++
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 613 ILVRAVMNN 621
           I+++ +   
Sbjct: 589 IILQGLFQT 597



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---------------VIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V  S               ++  Y  
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M+   G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 282 SGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  N   ++ILI  + K+G   +A  ++ ++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + P+ VTY  +I  LCK GR ++ +  +++M        +  Y S IH LC    
Sbjct: 401 -RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + A+ +  EM++ GI +D + +N++ID  C+ G++ E  +L+++M R G   ++++Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING CK                  
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK------------------ 561

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 556 KA 557
           +A
Sbjct: 742 RA 743



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 25/468 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V PN+ TY +
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C  GR D        + K     D+  +   + GLC       A + V R M + 
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGLLENGKVD 327
           G   +  +YN ++ G C   + +E  EL ++M   G     +VVSY  +I G  + G +D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A   +  + ++    +  T+  +I  LCK   ++KA+++L                   
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS----------------- 259

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK  
Sbjct: 260 -MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  P+  +++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+ A+ ++S M+++   P+ VTY T++  L K+G  + A+  +  +++E
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           RL P  I YN  +  LC   +   A E + + L RGI   TI ++ ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVS 435
           GRL    + +  + K G +++A     L+ G     +  +A+  + + M++ GC P V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           YN L+ GLC   R  EA   ++ M + G    PD+++Y+ +ING  +   +D A     +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G  P+V  Y+ +I  LC A  ++ A+++ ++M K   +PN  TYN+++ G   +G 
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A+     +  + + PD+++YN  +  LC   R ++A +  +    RG+ P   T+  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 614 LVRAVMNNGA 623
           L++     GA
Sbjct: 345 LLQGYATKGA 354



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 187/464 (40%), Gaps = 83/464 (17%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS T+  G       +  +L+       +V +  +L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           +L+ ++    P     S+ I AY K    D+A+ VF +M +         +G   GILC+
Sbjct: 363 DLM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 113 KRQFEKAKRFLNSLWEKGLKP-----------------------------------DVYS 137
             + E A R+   + ++ L P                                   D   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           + ++I+   K G ++ +  +FD M   GV+ +++ Y+ LIDG+   G    A ++   +V
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ VTYN +ING CK  R ++ L ++  M+ +    D  TY   + GL +    
Sbjct: 542 -SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A+ +Y  + ESG  ++  TYN ++ G C+     E   +++ +      L   ++NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 317 IRGLLENGKVDEAISIWELL-----------------------------------REKNC 341
           I  LL+ G+ DEA  ++  L                                    E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            A+S     ++  L + G + +A   L  ++E      A  ASL
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASL 764



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G      N  T   L+     A +L+        + +KG     +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M + G  P++ +Y++L+ GLC   +   AL+L     
Sbjct: 130 TPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189

Query: 496 QKGF--TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             G    PDV  Y  +I+G    G ++ A   Y  M  R  +PN+VTY++++  L K   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+E+   +++  + P+  +YN  + G CS  +  +A  FL      G+ P  +T++ 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 614 LVRAVMNNGAST 625
           L+  +  NG  T
Sbjct: 310 LMDYLCKNGRCT 321



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYC----- 71
           ++ DS  +E     S  LF  ++R  + P ++ + + I       ++ E  K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 72  ---PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
              P+ V   ++I  Y K S  + AL +F+ M E  G    I         L + R+   
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK     + E G + ++ +Y  +++GL K+     AL +F  +    ++     +NI+I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    AK+++  L     + P+V TY++M   L + G  +E  +++  M++N   
Sbjct: 663 ALLKVGRNDEAKDLFAALS-ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +S    S +  L + G++  A      + E    ++A T +  +D     GK +E
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQE 776


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 263/543 (48%), Gaps = 31/543 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGT 140
           A+D+  R     GC   +         LC + + ++A   L  + + G    PDV SY T
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VING  K GDL  A   + EM +RG+  NVV Y+ +I    K     +A E+   +V + 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV-KN 263

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            V PN  TYN +++G C  G+  E +    +M  +  E D  TY S +  LCK G    A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   N   ++ILI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + GKVD+A+ ++  +R++  N D+ T+G +I  LCK+G                  R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG------------------RV 425

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA     +M            NSL++      K + A  L  EM  +G     + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+  CK  R  E+      M+  G KPD+ITYS LI+G C + K+D A KL    +  G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD   YN LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  I E   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A++
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 620 NNG 622
             G
Sbjct: 666 KVG 668



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 268/549 (48%), Gaps = 26/549 (4%)

Query: 98  RMNEIFG--CEAGILCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLL 152
           R   I+G  C    + R        R+ N +   G   + P++ +YG +I     +G L 
Sbjct: 50  RGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
              A    + ++G   + + +  L+ G         A +I  R + +    PNV +YN++
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 213 INGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           + GLC   R  E LE+   M  +  +   D  +Y + I+G  K G+++ A   Y EM++ 
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  + VTY+++I   C+A  + +  E+   M + G + N  +YN ++ G   +G+  EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I   + +       D  T+  L++ LCKNG   +A ++ + + + G              
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L +   L++ M ++G   N Y  + L+  + +  K++ A+ +F +M ++G +P 
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y T+I  LCK  R  +A  + ++M+++   P  I Y+ LI+ LC   K D A +L  
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + L +G   D   +N +I   C  G+V ++ +L+  M +    P+++TY+TL+DG    G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+A ++   ++   ++PD ++YN  + G C  SRM DA     +    G+ P  IT++
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 613 ILVRAVMNN 621
           I+++ +   
Sbjct: 589 IILQGLFQT 597



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---------------VIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V  S               ++  Y  
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M+   G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 282 SGQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  N   ++ILI  + K+G   +A  ++ ++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + P+ VTY  +I  LCK GR ++ +  +++M        +  Y S IH LC    
Sbjct: 401 -RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + A+ +  EM++ GI +D + +N++ID  C+ G++ E  +L+++M R G   ++++Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING CK                  
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK------------------ 561

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 556 KA 557
           +A
Sbjct: 742 RA 743



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 25/468 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V PN+ TY +
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGI 96

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C  GR D        + K     D+  +   + GLC       A + V R M + 
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGLLENGKVD 327
           G   +  +YN ++ G C   + +E  EL ++M   G     +VVSY  +I G  + G +D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A   +  + ++    +  T+  +I  LCK   ++KA+++L                   
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS----------------- 259

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK  
Sbjct: 260 -MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  P+  +++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+ A+ ++S M+++   P+ VTY T++  L K+G  + A+  +  +++E
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           RL P  I YN  +  LC   +   A E + + L RGI   TI ++ ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 21/280 (7%)

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+G+LI   C  G L+     L  V                   K G +++A     L+ 
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVI------------------KKGFRVDAIAFTPLLK 134

Query: 407 GFIQASKLENAI-FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW- 464
           G     +  +A+  + + M++ GC P V SYN L+ GLC   R  EA   ++ M + G  
Sbjct: 135 GLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194

Query: 465 -KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD+++Y+ +ING  +   +D A     + L +G  P+V  Y+ +I  LC A  ++ A+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++ ++M K   +PN  TYN+++ G   +G   +A+     +  + + PD+++YN  +  L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C   R ++A +  +    RG+ P   T+  L++     GA
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 187/464 (40%), Gaps = 83/464 (17%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS T+  G       +  +L+       +V +  +L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           +L+ ++    P     S+ I AY K    D+A+ VF +M +         +G   GILC+
Sbjct: 363 DLM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 113 KRQFEKAKRFLNSLWEKGLKP-----------------------------------DVYS 137
             + E A R+   + ++ L P                                   D   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           + ++I+   K G ++ +  +FD M   GV+ +++ Y+ LIDG+   G    A ++   +V
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ VTYN +ING CK  R ++ L ++  M+ +    D  TY   + GL +    
Sbjct: 542 -SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A+ +Y  + ESG  ++  TYN ++ G C+     E   +++ +      L   ++NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 317 IRGLLENGKVDEAISIWELL-----------------------------------REKNC 341
           I  LL+ G+ DEA  ++  L                                    E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            A+S     ++  L + G + +A   L  ++E      A  ASL
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASL 764



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G      N  T   L+     A +L+        + +KG     +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M + G  P++ +Y++L+ GLC   +   AL+L     
Sbjct: 130 TPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189

Query: 496 QKGF--TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             G    PDV  Y  +I+G    G ++ A   Y  M  R  +PN+VTY++++  L K   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+E+   +++  + P+  +YN  + G CS  +  +A  FL      G+ P  +T++ 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 614 LVRAVMNNGAST 625
           L+  +  NG  T
Sbjct: 310 LMDYLCKNGRCT 321



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYC----- 71
           ++ DS  +E     S  LF  ++R  + P ++ + + I       ++ E  K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 72  ---PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
              P+ V   ++I  Y K S  + AL +F+ M E  G    I         L + R+   
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK     + E G + ++ +Y  +++GL K+     AL +F  +    ++     +NI+I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    AK+++  L     + P+V TY++M   L + G  +E  +++  M++N   
Sbjct: 663 ALLKVGRNDEAKDLFAALS-ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +S    S +  L + G++  A      + E    ++A T +  +D     GK +E
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQE 776


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 274/570 (48%), Gaps = 32/570 (5%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ 115
           I+K +  + +A + +++    +     A+D+  R     GC   +         LC   +
Sbjct: 118 IKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNR 177

Query: 116 FEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            ++A   L  + + G    PDV SY TVING  K GDL  A   + EM +RG+  NVV Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           + +I    K     +A E+   +V +  V PN  TYN +++G C  G+  E +    +M 
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMV-KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            +  E D  TY S +  LCK G    A +++  M + G+  +  TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   L ++M R G   N   ++ILI    + GKVD+A+ ++  +R++  N D+ T+G +I
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
             LCK+G                  R+ DA     +M            NSL++      
Sbjct: 417 GILCKSG------------------RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K + A  L  EM  +G     + +N++I+  CK  R  E+      M+  G KPD+ITYS
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+G C + K+D A KL    +  G  PD   YN LI+G C   ++EDAL L+  M+  
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P+++TYN ++ GLF+T     A E++  I E   + ++ +YNI L GLC  +   +A
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
                +     +   T T++I++ A++  G
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVG 668



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 268/549 (48%), Gaps = 26/549 (4%)

Query: 98  RMNEIFG--CEAGILCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLL 152
           R   I+G  C    + R        R+ N +   G   + P++ +YG ++     +G L 
Sbjct: 50  RGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILMGSCCCAGRLD 108

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
              A    + ++G   + + +  ++ G         A +I  R + +    PNV +YN++
Sbjct: 109 LGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 213 INGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           + GLC   R  E LE+   M  +  +   D  +Y + I+G  K G+++ A   Y EM++ 
Sbjct: 169 LKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  + VTY+++I   C+A  + +  E+   M + G + N  +YN ++ G   +G+  EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
           I   + +       D  T+  L++ LCKNG   +A ++ + + + G              
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L +   L++ M ++G   N Y  + L+  + +  K++ A+ +F +M ++G +P 
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y T+I  LCK  R  +A  + ++M+++   P  I Y+ LI+ LC   K D A +L  
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + L +G   D   +N +I   C  G+V ++ +L+  M +    P+++TY+TL+DG    G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D+A ++   ++   ++PD ++YN  + G C  SRM DA     +    G+ P  IT++
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 613 ILVRAVMNN 621
           I+++ +   
Sbjct: 589 IILQGLFQT 597



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---------------VIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V  S               ++  Y  
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M+   G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 282 SGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  N   ++ILI  + K+G   +A  ++ ++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + P+ VTY  +I  LCK GR ++ +  +++M        +  Y S IH LC    
Sbjct: 401 -RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + A+ +  EM++ GI +D + +N++ID  C+ G++ E  +L+++M R G   ++++Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING CK                  
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK------------------ 561

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 556 KA 557
           +A
Sbjct: 742 RA 743



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 219/468 (46%), Gaps = 25/468 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V PN+ TY +
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           ++   C  GR D        + K     D+  +   + GLC       A + V R M + 
Sbjct: 97  LMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGLLENGKVD 327
           G   +  +YN ++ G C   + +E  EL ++M   G     +VVSY  +I G  + G +D
Sbjct: 157 GCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A   +  + ++    +  T+  +I  LCK   ++KA+++L                   
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS----------------- 259

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK  
Sbjct: 260 -MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  P+  +++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+ A+ ++S M+++   P+ VTY T++  L K+G  + A+  +  +++E
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           RL P  I YN  +  LC   +   A E + + L RGI   TI ++ ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 3/250 (1%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGCSPTVVS 435
           GRL    + +  + K G  ++A     ++ G     +  +A+  + + M++ GC P V S
Sbjct: 105 GRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           YN L+ GLC   R  EA   ++ M + G    PD+++Y+ +ING  +   +D A     +
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G  P+V  Y+ +I  LC A  ++ A+++ ++M K   +PN  TYN+++ G   +G 
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A+     +  + + PD+++YN  +  LC   R ++A +  +    RG+ P   T+  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 614 LVRAVMNNGA 623
           L++     GA
Sbjct: 345 LLQGYATKGA 354



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 187/464 (40%), Gaps = 83/464 (17%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS T+  G       +  +L+       +V +  +L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 62  ELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           +L+ ++    P     S+ I AY K    D+A+ VF +M +         +G   GILC+
Sbjct: 363 DLM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 113 KRQFEKAKRFLNSLWEKGLKP-----------------------------------DVYS 137
             + E A R+   + ++ L P                                   D   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           + ++I+   K G ++ +  +FD M   GV+ +++ Y+ LIDG+   G    A ++   +V
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ VTYN +ING CK  R ++ L ++  M+ +    D  TY   + GL +    
Sbjct: 542 -SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A+ +Y  + ESG  ++  TYN ++ G C+     E   +++ +      L   ++NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 317 IRGLLENGKVDEAISIWELL-----------------------------------REKNC 341
           I  LL+ G+ DEA  ++  L                                    E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            A+S     ++  L + G + +A   L  ++E      A  ASL
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASL 764



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G      N  T   LM     A +L+        + +KG     +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAF 129

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             ++ GLC  +R  +A   V + M + G  P++ +Y++L+ GLC   +   AL+L     
Sbjct: 130 TPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMP 189

Query: 496 QKGF--TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             G    PDV  Y  +I+G    G ++ A   Y  M  R  +PN+VTY++++  L K   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+E+   +++  + P+  +YN  + G CS  +  +A  FL      G+ P  +T++ 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 614 LVRAVMNNGAST 625
           L+  +  NG  T
Sbjct: 310 LMDYLCKNGRCT 321



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYC----- 71
           ++ DS  +E     S  LF  ++R  + P ++ + + I       ++ E  K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 72  ---PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
              P+ V   ++I  Y K S  + AL +F+ M E  G    I         L + R+   
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK     + E G + ++ +Y  +++GL K+     AL +F  +    ++     +NI+I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    AK+++  L     + P+V TY++M   L + G  +E  +++  M++N   
Sbjct: 663 ALLKVGRNDEAKDLFAALS-ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +S    S +  L + G++  A      + E    ++A T +  +D     GK +E
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQE 776


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 265/522 (50%), Gaps = 19/522 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + ++  +       L  KG+   + +   ++ GLV++G +  A  ++ E+   G+E NV 
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+++   K   +         +  +  V+ ++VTYN +IN  C+ G  +E  ++ + 
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNS 317

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
                 E    TY + ++GLCK G  + A+ V  EM++ G+  +A TYN ++   CR   
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I E  E+++ M R+G L ++VS++ LI  L  NG + +A+  +  +       D+  + +
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI+G C+NG L+ A+++ +E+   G                 +   ADA  L N M + G
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              + YT  +L+ G+ +   ++ A+ LF+ M R    P  V+YNTLI+G CK    G A 
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               +M+ K   PD I+Y  ++NG C S  +  AL LC Q L+KG  P++   N LI G 
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C +G +  A +  S M     +P+  +YNTL+DG  K  + +KA  + N + +  L+ +I
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I+YN+ L G C+  +M +A + L   +  GI P   T+  L+
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 257/498 (51%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+FE    FL+ +  KG+  D+ +Y T+IN   + G +  A  + +    RG+E  
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN ++ G  K G Y RAK++   + ++  + PN  TYN ++  +C+     E  E++
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEM-LQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     D  ++ S I  L + G++  A   +REM  SGI  D V Y  +IDGFCR 
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +  ++ + M  +GC ++VV+YN  + GL +     +A  ++  + E+    D  T 
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+G ++KA+                  +L   M +   K +  T N+L++GF
Sbjct: 506 TTLIRGYCKDGNMDKAL------------------NLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A ++  A  L+ +M RK   P  +SY T++NG C      EA +   +MLEKG +P++
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T + LI G C+S  +  A +   + +  G  PD   YN LI G      +E A  L + 
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+KR    N++TYN +++G    G   +A ++   ++E  + PD  +Y+  + G  S   
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 589 MSDAFEFLNDALCRGILP 606
           M +AF F ++ L RG++P
Sbjct: 728 MKEAFRFHDEMLQRGLVP 745



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 239/479 (49%), Gaps = 20/479 (4%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  ++   V++  L      F  +  +GV  ++   N L+ G  + G    A EI+  +V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               +  NV T N+M+N LCK  +F+  +     M+      D  TY + I+  C+ G V
Sbjct: 250 -RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A ++       G+    +TYNA++ G C+ GK     ++   M + G   N  +YN L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  +     + EA  I++ +  +    D  +   LI  L +NG+L +A+    E      
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE------ 422

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M++ G   +      L++GF +   L +A+ +  EM  +GC   VV+Y
Sbjct: 423 ------------MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT +NGLCK + F +A     EM+E+G  PD  T++ LI G C+   +D AL L    ++
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
               PD   YN LI G C AG++  A +L+ +M +++ +P+ ++Y T+++G   +G   +
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           AL + + +LE+ +RP++++ N  +KG C    M  A+E+L+  +  GI+P + +++ L+
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 217/443 (48%), Gaps = 24/443 (5%)

Query: 186 YMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           Y++AK++ E     +++    V  ++   N ++ GL + G  D   E++  + +   E +
Sbjct: 197 YVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +T    ++ LCK    E       +M   G+F D VTYN +I+ +CR G ++E F+L  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
               +G    +++YN ++ GL + GK D A  +   + +     ++ T+  L+  +C+  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            + +A +I +E                  M + G   +  + +SL+    +   L  A+ 
Sbjct: 377 NILEAQEIFDE------------------MSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F+EM R G  P  V Y  LI+G C+     +A     EML +G   D++TY+  +NGLC
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           + K    A  L  + +++G  PD   +  LI G C  G ++ AL L+  M + N  P+ V
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNTL+DG  K G+  +A E+W+ ++ + + PD ISY   L G CS   + +A    +  
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           L +GI P  +T + L++    +G
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSG 621



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 180/366 (49%), Gaps = 20/366 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+L R     +A      +   G+ PD   Y  +I+G  ++G L  AL + DEM 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RG   +VV YN  ++G  KK  +  A  ++  +V E  + P+  T+  +I G CK G  
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV-ERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+ L +++ M +   + D  TY + I G CKAG +  A+ ++ +M+   I  D ++Y  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ++GFC +G + E   L + M  KG   N+V+ N LI+G   +G + +A      +     
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             DS ++  LI+G  K   L KA  ++NE                  M+K G + N  T 
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINE------------------MEKRGLQFNIITY 680

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF    K++ A  + ++M   G +P   +Y++LING    +   EA+ F  EML+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740

Query: 462 KGWKPD 467
           +G  PD
Sbjct: 741 RGLVPD 746



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L + +     + + G  ++   CN L+ G ++   ++ A  ++ E+ R G    V + N
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLN 261

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            ++N LCK  +F     F+ +M  KG   D++TY+ LIN  C+   ++ A +L   F  +
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P +  YN +++GLC  GK + A  +   M +    PN  TYNTL+  + +  +  +A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            EI++ +    + PD++S++  +  L     +  A     +    GI+P  + + IL+  
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 618 VMNNGA 623
              NGA
Sbjct: 442 FCRNGA 447


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 265/522 (50%), Gaps = 19/522 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + ++  +       L  KG+   + +   ++ GLV++G +  A  ++ E+   G+E NV 
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+++   K   +         +  +  V+ ++VTYN +IN  C+ G  +E  ++ + 
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNS 317

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
                 E    TY + ++GLCK G  + A+ V  EM++ G+  +A TYN ++   CR   
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I E  E+++ M R+G L ++VS++ LI  L  NG + +A+  +  +       D+  + +
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI+G C+NG L+ A+++ +E+   G                 +   ADA  L N M + G
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              + YT  +L+ G+ +   ++ A+ LF+ M R    P  V+YNTLI+G CK    G A 
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               +M+ K   PD I+Y  ++NG C S  +  AL LC Q L+KG  P++   N LI G 
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C +G +  A +  S M     +P+  +YNTL+DG  K  + +KA  + N + +  L+ +I
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I+YN+ L G C+  +M +A + L   +  GI P   T+  L+
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 257/498 (51%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+FE    FL+ +  KG+  D+ +Y T+IN   + G +  A  + +    RG+E  
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN ++ G  K G Y RAK++   + ++  + PN  TYN ++  +C+     E  E++
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEM-LQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     D  ++ S I  L + G++  A   +REM  SGI  D V Y  +IDGFCR 
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +  ++ + M  +GC ++VV+YN  + GL +     +A  ++  + E+    D  T 
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+G ++KA+                  +L   M +   K +  T N+L++GF
Sbjct: 506 TTLIRGYCKDGNMDKAL------------------NLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A ++  A  L+ +M RK   P  +SY T++NG C      EA +   +MLEKG +P++
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T + LI G C+S  +  A +   + +  G  PD   YN LI G      +E A  L + 
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+KR    N++TYN +++G    G   +A ++   ++E  + PD  +Y+  + G  S   
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 589 MSDAFEFLNDALCRGILP 606
           M +AF F ++ L RG++P
Sbjct: 728 MKEAFRFHDEMLQRGLVP 745



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 239/479 (49%), Gaps = 20/479 (4%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  ++   V++  L      F  +  +GV  ++   N L+ G  + G    A EI+  +V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               +  NV T N+M+N LCK  +F+  +     M+      D  TY + I+  C+ G V
Sbjct: 250 -RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E A ++       G+    +TYNA++ G C+ GK     ++   M + G   N  +YN L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  +     + EA  I++ +  +    D  +   LI  L +NG+L +A+    E      
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE------ 422

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M++ G   +      L++GF +   L +A+ +  EM  +GC   VV+Y
Sbjct: 423 ------------MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT +NGLCK + F +A     EM+E+G  PD  T++ LI G C+   +D AL L    ++
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
               PD   YN LI G C AG++  A +L+ +M +++ +P+ ++Y T+++G   +G   +
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           AL + + +LE+ +RP++++ N  +KG C    M  A+E+L+  +  GI+P + +++ L+
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 217/443 (48%), Gaps = 24/443 (5%)

Query: 186 YMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           Y++AK++ E     +++    V  ++   N ++ GL + G  D   E++  + +   E +
Sbjct: 197 YVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +T    ++ LCK    E       +M   G+F D VTYN +I+ +CR G ++E F+L  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
               +G    +++YN ++ GL + GK D A  +   + +     ++ T+  L+  +C+  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            + +A +I +E                  M + G   +  + +SL+    +   L  A+ 
Sbjct: 377 NILEAQEIFDE------------------MSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F+EM R G  P  V Y  LI+G C+     +A     EML +G   D++TY+  +NGLC
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           + K    A  L  + +++G  PD   +  LI G C  G ++ AL L+  M + N  P+ V
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNTL+DG  K G+  +A E+W+ ++ + + PD ISY   L G CS   + +A    +  
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           L +GI P  +T + L++    +G
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSG 621



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 180/366 (49%), Gaps = 20/366 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+L R     +A      +   G+ PD   Y  +I+G  ++G L  AL + DEM 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RG   +VV YN  ++G  KK  +  A  ++  +V E  + P+  T+  +I G CK G  
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV-ERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+ L +++ M +   + D  TY + I G CKAG +  A+ ++ +M+   I  D ++Y  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ++GFC +G + E   L + M  KG   N+V+ N LI+G   +G + +A      +     
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             DS ++  LI+G  K   L KA  ++NE                  M+K G + N  T 
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINE------------------MEKRGLQFNIITY 680

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF    K++ A  + ++M   G +P   +Y++LING    +   EA+ F  EML+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740

Query: 462 KGWKPD 467
           +G  PD
Sbjct: 741 RGLVPD 746



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L + +     + + G  ++   CN L+ G ++   ++ A  ++ E+ R G    V + N
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLN 261

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            ++N LCK  +F     F+ +M  KG   D++TY+ LIN  C+   ++ A +L   F  +
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P +  YN +++GLC  GK + A  +   M +    PN  TYNTL+  + +  +  +A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            EI++ +    + PD++S++  +  L     +  A     +    GI+P  + + IL+  
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 618 VMNNGA 623
              NGA
Sbjct: 442 FCRNGA 447


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 270/564 (47%), Gaps = 61/564 (10%)

Query: 118 KAKRFLNSLW-----EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           KA     S W      +G+ PDVY + T IN   K G +  A+ +F +M + GV  NVV 
Sbjct: 224 KANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVT 283

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI G  K G+   A    E++V +  V   ++TY+V+INGL K  +F+E   +    
Sbjct: 284 YNNLIHGLCKHGNLDEAFRFKEKMVKD-GVNATLITYSVLINGLMKLEKFNEANSVLKET 342

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +     +   Y + I G CK GN+  A R+  +MV  GI  ++VT N++I GFC+ G++
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402

Query: 293 K--ECFELWEVMGRKGCLNVVSYNILIR-------------------------------- 318
           +  EC  L E++ R   +N  ++  +I                                 
Sbjct: 403 EQAECI-LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461

Query: 319 ---GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
              GL + GK  +A+ +W  L EK   A+  T   LI+GLCK G + +A+++L ++ E G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EG++ +   L   M K G + + +T N L++G  +  KL+ A+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L+ E   +   P V +Y  +I+G CK ++  E      E+L +  + + + Y+ LI   
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++     A KL      KG  P    Y+ LIHG+C+ G++EDA  L   M+K   +PN+
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           V Y  L+ G  K G  DK + +   +    + P+ I+Y + + G      M  A + L++
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            + +GI+P T+T+++L       G
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEG 785



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 183/624 (29%), Positives = 303/624 (48%), Gaps = 52/624 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           NP TAL  F  A+   G+  +   +  ++R LI    V   +R+L +  I       D  
Sbjct: 91  NPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFV-SPARLLLIRLI-------DRK 142

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC--------------RKRQFEKAKRF 122
           L V+    KN   + A      +NE+   E+G+                R   F  A   
Sbjct: 143 LPVLFGDPKNRHIEIA-SAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGV 199

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
              L  KG+ P V +   +++ LVK+ +L  +  VF+ M  +GV  +V  ++  I+ F K
Sbjct: 200 FRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCK 258

Query: 183 KGDYMRAKEIW---ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
            G    A +++   E+L     V PNVVTYN +I+GLCK G  DE     ++M K+    
Sbjct: 259 GGKVEDAIQLFFDMEKL----GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
              TY   I+GL K      A  V +E +E G   + V YN +IDG+C+ G + +   + 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  KG   N V+ N +I+G  + G++++A  I E +  +  + +      +I+ LC N
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                A++ L E+             L+  M     + N     +L+ G  +  K  +A+
Sbjct: 435 SRFESALRFLREM-------------LLRNM-----RPNDGLLTTLVGGLCKEGKHSDAV 476

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L+  +  KG    +V+ N LI+GLCK     EA   +K+MLE+G+  D ITY+ LI+G 
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  K++   KL  + +++G  PD   YN+LIHG+C  GK+++A+ L++  K R+ VPN+
Sbjct: 537 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            TY  ++DG  K    ++  +++  +L + L  + + YN  ++  C      +AF+  +D
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
              +GI PTT T+  L+  + N G
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIG 680



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 173/637 (27%), Positives = 294/637 (46%), Gaps = 43/637 (6%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKL---VVHVSRILELIEIQKCY---------CPEDVAL 77
           R  G+ ++  +F  +  + + P +      +S +++  E++K Y            DV L
Sbjct: 189 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYL 248

Query: 78  --SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSL 126
             + I A+ K    + A+ +F  M E  G    +         LC+    ++A RF   +
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            + G+   + +Y  +INGL+K      A +V  E  E+G   N V YN LIDG+ K G+ 
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  I   +V +  + PN VT N +I G CK G+ ++   + + M       +   + +
Sbjct: 368 GDALRIRGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            IH LC     E A R  REM+   +  +      ++ G C+ GK  +  ELW  +  KG
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N+V+ N LI GL + G + EA+ + + + E+    D  T+  LI+G CK G + +  
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 366 QILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           ++  E V++G E                G+L +A +L N         N YT   +++G+
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K+E    LF E+  +      V YNTLI   C+     EA+    +M  KG  P  
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TYS LI+G+C   +++ A  L  +  ++G  P+V  Y  LI G C  G+++  + +   
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M   +  PN +TY  ++DG  K+GD   A ++ + ++ + + PD ++YN+   G C   +
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + + F+  +     G+    IT+  LV       A T
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 268/533 (50%), Gaps = 56/533 (10%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     L E+ L P+  +Y  +I+G  K GD+     +  EM E+ +  NV+ Y+ ++D
Sbjct: 211 AEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVD 270

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G+ KKG    A ++  ++V + ++ PNV  Y  +I+G  K  +    L+++  MK    E
Sbjct: 271 GYTKKGLLNEAMDVMRKMV-QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           +++F   SF++ L ++G +E A+ ++++M+  G+  D V Y +M+DGF +AGK  + F +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M  K    +VV+YN+LI GL + GK  E+ S    +R+     DS T   +IN  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G L  A+++LNE                  M  +G K N+ TCN L+     A ++E  
Sbjct: 449 EGNLGNALKLLNE------------------MKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 418 IFLFKEMSRKGCSPT-----------------------------------VVSYNTLING 442
           + L  +M   G  PT                                   + +YNTLI+ 
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C++     A    K+M+ KG   D+ITY+ LI+G C S  +  A  +  Q L +G +P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YNIL+ GL +A  +++A  L + MK+R  VPN  TY+ L+ G  K G+  + ++++ 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ++ +   P   +YN+ +       +MS A E + +   RGI P + T+ IL+
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 263/515 (51%), Gaps = 20/515 (3%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R LN+     ++  V  +  +I+G  ++G++  A+ + + M   G   ++V YN L++GF
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K GD   AK++   + +  ++ PNV+TY  +I+  CK    ++ L M+D M       D
Sbjct: 63  CKIGDLFTAKKLMGEISL-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   ++GLCK+G VE A+ V+REM E G+  +  +Y  +ID   + G + E F L  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G   +VV Y  L+ GL + G  + A  ++++L E++   +  T+  LI+G CK G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +NK   +L E+EE                   +G L +A  ++ +M +     N +   
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G+ +A +   A+ LFKEM  +G        ++ +N L +  R  EA    K+M+ +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD + Y+ +++G  ++ K   A  +  +  +K    DV  YN+LI+GL   GK E  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
              ++ M++    P+  T+NT+++   K G+   AL++ N +    L+P+ I+ NI ++ 
Sbjct: 422 -SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           LC+   +    + LND L  G  PT  T   ++ A
Sbjct: 481 LCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 218/455 (47%), Gaps = 57/455 (12%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V  +NV+I+G C+ G     +E+ + MK      D  TY + ++G CK G++  A+++ 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            E+    +  + +TY  +ID +C++  +++   +++ M  K  + +VV+Y  ++ GL ++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GKV+EA S++  + E     +  ++  LI+ L K                  EG +A+A 
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK------------------EGNVAEAF 177

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  RM   G   +     +LM+G  +A    NA  +F+ +  +   P  V+Y+ LI+G 
Sbjct: 178 VLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGH 237

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+    +    ++EM EK   P++I YS +++G  +   ++ A+ +  + +Q+   P+V
Sbjct: 238 CKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNV 297

Query: 504 TMYNILIHG-----------------------------------LCSAGKVEDALQLYSN 528
            +Y  LI G                                   L  +G++E+A +L+ +
Sbjct: 298 FVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  R  +P+ V Y ++MDG FK G    A  I   + E+    D+++YN+ + GL    +
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417

Query: 589 M-SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             S++F      L  G+ P + T++ ++ A    G
Sbjct: 418 YESESFHTGMRQL--GLAPDSATFNTMINAYCKEG 450



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 231/501 (46%), Gaps = 40/501 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K      ALD+F+ M        N +       L R  + E+A      +  +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL PD  +Y ++++G  K+G    A  +  EM E+    +VV YN+LI+G FK G Y   
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--E 419

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E +   + +  + P+  T+N MIN  CK G     L++ + MK    + +S T    + 
Sbjct: 420 SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
            LC AG +E    +  +M+  G      T+ A++D   ++ +      +  +++G    L
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI--- 365
           ++ +YN LI      G +  A  +++ +  K   AD  T+  LI+G C + +L KA    
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 366 -QILNE-----VEE-----GG--EGRL-ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            Q+L E     VE      GG    RL  +AA LVN+M + G   NA T + L++G  + 
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++  + L+ EM  KG  P   +YN LI+   K ++  +A   ++EM  +G  P+  TY
Sbjct: 660 GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719

Query: 472 SLLING---LCQSKKIDMALKLCCQ---------FLQKGFTPDVTMYNILIHGLCSAGKV 519
            +LI G   L +  +++ +LK   Q           +KGF P       +   L   GK 
Sbjct: 720 DILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKK 779

Query: 520 EDALQLYSNMKKRNCVPNLVT 540
            DA ++ + + K+  V  L+ 
Sbjct: 780 ADAQRILNKLYKKKTVQELLA 800


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/594 (27%), Positives = 291/594 (48%), Gaps = 35/594 (5%)

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
           E+IE    + P + A+S ++    K      A D+  ++ + FG    +         +C
Sbjct: 310 EMIEFG--FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK-FGVAPSLFVYNALINSMC 366

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +  + ++A+   N++  KGL P+  +Y  +I+   K G L  AL    +M E G++  V 
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ LI G  K G    AK +++ ++    + PNVV Y  +I+G CK G       ++  
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMI-ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M       +++T+ + I GLC A  +  A +++ EMVE  +  + VTYN +I+G C+ G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
               FEL + M  KG + +  +Y  LI GL   G+V EA      L+ +    +      
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEG--------------RLADAASLVN---RMDKHG 393
           L++G CK G L+ A+    E+   G                R  D  S+++   +M   G
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            + +     ++++   +A  L+ A  L+  M  +GC P VV+Y  LINGLCK+    +A 
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +EML     P+  TY+  ++ L     I+ A++L    L +GF  +   YNILI G 
Sbjct: 726 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGF 784

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G++++A ++  NM      P+ ++Y+T++    + GD  +A+++W  +L   + PD 
Sbjct: 785 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA--VMNNGAST 625
           ++YN  + G C    ++ AFE  +D + RG+ P   T++ L+    +M++ +ST
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 312/635 (49%), Gaps = 31/635 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           +LN L   +    AL LFD      G     +++  ++R L + K  +    ++  +E  
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEK 118
            C          I+   KN    +A+++ + +    G  A +         LC+  +FE 
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            +  +N + E G  P   +   +++GL K G++  A  + +++ + GV  ++  YN LI+
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K G    A+ ++  +     ++PN VTY+++I+  CK G+ D  L    +M +   +
Sbjct: 364 SMCKDGKLDEAESLFNNM-GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
              + Y S I G CK G +  A+ ++ EM+ +G+  + V Y ++I G+C+ G++   F L
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +  M  KG   N  ++  LI GL    ++ EA  ++  + E N   +  T+ VLI G CK
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
            G   +A ++L+E+ E G                  GR+++A   +N +     KLN   
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            ++L++G+ +  +L++A+   +EM  +G +  +V Y+ LI G+ + +        +K+M 
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++G +PD + Y+ +I+   ++  + MA  L    + +G  P+V  Y  LI+GLC  G ++
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A  L   M   N +PN  TY   +D L   G+ +KA+++ + +LE  L  + ++YNI +
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILI 781

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +G C   R+ +A E L + +  GI P  I++  ++
Sbjct: 782 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 251/507 (49%), Gaps = 21/507 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P + +   V+NGL++      AL +FDE+   G+  +V  Y  ++    +  D++RA
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 190 KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           +E+  R  ME+S    +V TYNV I GLCK  R  E +E+ + +       D  TYC+ +
Sbjct: 235 REVIGR--MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLCK    E  E +  EM+E G        + ++DG  + G I   F+L   + + G  
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++  YN LI  + ++GK+DEA S++  +  K    +  T+ +LI+  CK G L+ A+  
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L ++ E G                  G+L  A SL + M  +G K N     SL++G+ +
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +L NA  L+ EM+ KG SP   ++  LI+GLC   R  EA     EM+E    P+ +T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++LI G C+      A +L  + ++KG  PD   Y  LI GLCS G+V +A +  ++++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
                 N + ++ L+ G  K G  D AL+    +L   +  D++ Y++ + G+       
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652

Query: 591 DAFEFLNDALCRGILPTTITWHILVRA 617
              + L     +G+ P  + +  ++ A
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDA 679



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 264/594 (44%), Gaps = 50/594 (8%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           HLF  I+   + P + V+ + +  L E++                       +A +V  R
Sbjct: 201 HLFDEIVSSGLRPDVYVYTAVVRSLCELKDFI--------------------RAREVIGR 240

Query: 99  MNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           M E  GC+  +         LC+ ++  +A    N L  KGL+ DV +Y T++ GL K  
Sbjct: 241 M-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
           +      + +EM E G   +    + L+DG  KKG+   A ++  + V +  V P++  Y
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK-VKKFGVAPSLFVY 358

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N +IN +CK G+ DE   +++ M       +  TY   I   CK G ++ A     +M E
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            GI      Y+++I G C+ GK++    L++ M   G   NVV Y  LI G  + G++  
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  ++  +  K  + ++ T   LI+GLC                     R+A+A  L   
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCH------------------ANRMAEANKLFGE 520

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M +     N  T N L+ G  +      A  L  EM  KG  P   +Y  LI+GLC   R
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA  F+ ++  +  K + + +S L++G C+  ++D AL  C + L +G   D+  Y++
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI+G+         + L   M  +   P+ V Y T++D   K G+   A  +W+ ++ E 
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             P++++Y   + GLC    M  A     + L    LP   T+   +  + + G
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 754



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 217/422 (51%), Gaps = 18/422 (4%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RL+M+  + P + T + ++NGL +  +F   L ++D +  +    D + Y + +  LC+ 
Sbjct: 169 RLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCEL 228

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
            +   A  V   M  SG  +   TYN  I G C+  ++ E  E+  ++  KG   +V +Y
Sbjct: 229 KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTY 288

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L+ GL +  + +    +   + E            L++GL K G +  A  ++N+V++
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 +G+L +A SL N M   G   N  T + L++ F +  KL+ 
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+    +M+  G   TV  Y++LI+G CK+ +   A S   EM+  G KP+++ Y+ LI+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+  ++  A +L  +   KG +P+   +  LI GLC A ++ +A +L+  M + N +P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N VTYN L++G  K G+  +A E+ + ++E+ L PD  +Y   + GLCS  R+S+A EF+
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 597 ND 598
           ND
Sbjct: 589 ND 590



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R  D   +V  M   G      T + ++NG I+  +   A+ LF E+   G  P V  Y 
Sbjct: 160 RELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYT 219

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            ++  LC+++ F  A   +  M   G    + TY++ I GLC+++++  A+++      K
Sbjct: 220 AVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYK 279

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   DV  Y  L+ GLC   + E   ++ + M +   VP+    + L+DGL K G+   A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++ N + +  + P +  YN  +  +C   ++ +A    N+   +G+ P  +T+ IL+ +
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 618 VMNNG 622
               G
Sbjct: 400 FCKRG 404


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 297/618 (48%), Gaps = 39/618 (6%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           L+ E     AL  F S      + H+P  F  ++R+L     V  V  +L+ +++Q  +C
Sbjct: 50  LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRF 122
            ED+ +SVI  Y +  + ++A+++F R+ E FGC+  +         L  + + +     
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENRIQMIYMV 168

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
              +   G +P+V++Y  ++  L K+  + GA  +  EM  +G   + V Y  +I    +
Sbjct: 169 YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE 228

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G     +E+ ER        P V  YN +INGLCK   +    E+   M +     +  
Sbjct: 229 VGLVKEGRELAERF------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           +Y + I+ LC +G +E A     +M++ G   +  T ++++ G    G   +  +LW  M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342

Query: 303 GRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
            R   L  NVV+YN L++G   +G + +A+S++  + E  C+ +  T+G LING  K G 
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L+ A+ I N                  +M   GC  N     +++    + SK + A  L
Sbjct: 403 LDGAVYIWN------------------KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KPDMITYSLLINGLC 479
            + MS++ C+P+V ++N  I GLC   R   A    ++M ++    P+++TY+ L++GL 
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ +I+ A  L  +   +G     + YN L+HG C+AG    ALQL   M      P+ +
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           T N ++    K G  ++A ++ + +     + RPD+ISY   + GLC  +   D    L 
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624

Query: 598 DALCRGILPTTITWHILV 615
             +  GI+P+  TW +L+
Sbjct: 625 RMISAGIVPSIATWSVLI 642



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/587 (26%), Positives = 259/587 (44%), Gaps = 42/587 (7%)

Query: 63  LIEIQKCYCP----EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
           L+++QK   P     ++ ++ +     N    K LDV +R+ +           +     
Sbjct: 10  LLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQ-----------ESCVPL 58

Query: 119 AKRFLNSLWEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A  F  S+    L K    ++  +I  L   G +     +  +M  +G   +   +  +I
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
             + + G   RA E++ R + E    P+V  YN +++ L    R      ++  MK++  
Sbjct: 119 SVYRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E + FTY   +  LCK   V+GA+++  EM   G   DAV+Y  +I   C  G +KE  E
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237

Query: 298 LWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L E         VVS YN LI GL +      A  +   + EK  + +  ++  LIN LC
Sbjct: 238 LAERFEP-----VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK-HGCKLNA 398
            +G +  A   L ++ + G                  G   DA  L N+M +  G + N 
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N+L+ GF     +  A+ +F  M   GCSP + +Y +LING  K      A     +
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ML  G  P+++ Y+ ++  LC+  K   A  L     ++   P V  +N  I GLC AG+
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472

Query: 519 VEDALQLYSNMKKRN-CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++ A +++  M++++ C PN+VTYN L+DGL K    ++A  +   I    +     +YN
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             L G C+      A + +   +  G  P  IT ++++ A    G +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 224/450 (49%), Gaps = 28/450 (6%)

Query: 71  CPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---LCRKRQFEKAKRFLNSL 126
           CP+ V+ + VI +  +  +  +  ++ +R   +      +   LC++  ++ A   +  +
Sbjct: 213 CPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREM 272

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            EKG+ P+V SY T+IN L  SG +  A +   +M +RG   N+   + L+ G F +G  
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A ++W +++    + PNVV YN ++ G C  G   + + ++  M++     +  TY S
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I+G  K G+++GA  ++ +M+ SG   + V Y  M++  CR  K KE   L E+M ++ 
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKN-CNADSTTHGVLINGLCKNGYLNKA 364
           C  +V ++N  I+GL + G++D A  ++  + +++ C  +  T+  L++GL K       
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK------- 505

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                        R+ +A  L   +   G + ++ T N+L++G   A     A+ L  +M
Sbjct: 506 -----------ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554

Query: 425 SRKGCSPTVVSYNTLINGLC---KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
              G SP  ++ N +I   C   K ER  +    V     K W+PD+I+Y+ +I GLC+S
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK-WRPDVISYTNVIWGLCRS 613

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
              +  + L  + +  G  P +  +++LI+
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 47/255 (18%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  + K    D A+ ++ +M    GC   +         LCR  +F++A+  +  + +
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKM-LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGD-- 185
           +   P V ++   I GL  +G L  A  VF +M ++     N+V YN L+DG  K     
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510

Query: 186 --YMRAKEIWERLV-METSVY-----------------------------PNVVTYNVMI 213
             Y   +EI+ R V   +S Y                             P+ +T N++I
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570

Query: 214 NGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
              CK G+ +   +M D +    R+   D  +Y + I GLC++   E    +   M+ +G
Sbjct: 571 LAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630

Query: 272 IFVDAVTYNAMIDGF 286
           I     T++ +I+ F
Sbjct: 631 IVPSIATWSVLINCF 645


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 179/677 (26%), Positives = 313/677 (46%), Gaps = 97/677 (14%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC-YCPEDVAL-SVIQAYGKNSMPDK 91
           +A SP +F  IL+  ++  L  +   + +   + KC   P   +  S++    KN     
Sbjct: 118 FAFSPTVFDMILKVYVEKGLTKNALYVFD--NMGKCGRIPSLRSCNSLLNNLVKNGETHT 175

Query: 92  ALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  V+Q+M       ++F     +   C+  + ++A  F+  +   G++P++ +Y ++IN
Sbjct: 176 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G V  GD+  A  V   M E+GV  NVV Y +LI G+ K+     A+++   +  E ++ 
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 295

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+   Y V+I+G C+ G+ D+ + + D M +   + + F   S I+G CK G +  AE V
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              MV+  +  D+ +YN ++DG+CR G   E F L + M ++G    V++YN L++GL  
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G  D+A+ IW L+ ++    D   +  L++GL K      A  +  ++   G       
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 475

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G++ +A  + ++M   GC  +  T  +L++G+ +AS +  A  +   M 
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING-------- 477
           R+  SP++  YN+LI+GL K  R  E    + EM  +G  P+++TY  LI+G        
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 478 -------------------LCQS--------KKIDMALKLCCQFLQKGFTPDV------- 503
                              +C +         +ID A  L  + +  GF PD        
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 504 -------------------------TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
                                     +YNI I GLC  GKV+DA + +S +  +  VP+ 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            TY TL+ G    G+ D+A  + + +L   L P+I++YN  + GLC    +  A    + 
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 599 ALCRGILPTTITWHILV 615
              +G+ P  +T++ L+
Sbjct: 776 LHQKGLFPNVVTYNTLI 792



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 285/548 (52%), Gaps = 52/548 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           C++ + ++A++ L  + E+  L PD  +YG +I+G  ++G +  A+ + DEM   G++TN
Sbjct: 273 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 332

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +   N LI+G+ K+G+   A+ +  R+V + ++ P+  +YN +++G C+ G   E   + 
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+M +   E    TY + + GLC+ G  + A +++  M++ G+  D V Y+ ++DG  + 
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +    LW +++ R    + +++N +I GL + GK+ EA  I++ +++  C+ D  T+
Sbjct: 452 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 511

Query: 349 GVLINGLCKNGYLNKA---------------IQILNEVEEG--GEGRLADAASLVNRMDK 391
             LI+G CK   + +A               I++ N +  G     RL +   L+  M  
Sbjct: 512 RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 571

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  T  +L++G+ +   L+ A   + EM+  G S  ++  +T+++GL ++ R  E
Sbjct: 572 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631

Query: 452 AYSFVKEMLEKGWKPDM--------------------------------ITYSLLINGLC 479
           A   +++M++ G+ PD                                 I Y++ I GLC
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 691

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ K+D A +       KGF PD   Y  LIHG  +AG V++A +L   M +R  VPN+V
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 751

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYN L++GL K+ + D+A  +++ + ++ L P++++YN  + G C    M  AF+  +  
Sbjct: 752 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811

Query: 600 LCRGILPT 607
           +  GI P+
Sbjct: 812 IEEGISPS 819



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/542 (28%), Positives = 271/542 (50%), Gaps = 31/542 (5%)

Query: 59  RILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM------NEIFGCEAGI-- 109
           ++L  ++ +    P++ A  V I  Y +    D A+ +   M        +F C + I  
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 342

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ +  +A+  +  + +  LKPD YSY T+++G  + G    A  + D+M + G+E  
Sbjct: 343 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 402

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN L+ G  + G +  A +IW  L+M+  V P+ V Y+ +++GL K   F+    +W
Sbjct: 403 VLTYNTLLKGLCRVGAFDDALQIWH-LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 461

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +      K   T+ + I GLCK G +  AE ++ +M + G   D +TY  +IDG+C+A
Sbjct: 462 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 521

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + + F++   M R+    ++  YN LI GL ++ ++ E   +   +  +    +  T+
Sbjct: 522 SNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 581

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
           G LI+G CK G L+KA     E+ E G                  GR+ +A  L+ +M  
Sbjct: 582 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 641

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG     + C   +   I+ + ++       E  +    P  + YN  I GLCK  +  +
Sbjct: 642 HGF-FPDHEC--FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  F   +  KG+ PD  TY  LI+G   +  +D A +L  + L++G  P++  YN LI+
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 758

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC +  V+ A +L+  + ++   PN+VTYNTL+DG  K G+ D A ++ + ++EE + P
Sbjct: 759 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818

Query: 572 DI 573
            I
Sbjct: 819 SI 820



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 285/599 (47%), Gaps = 63/599 (10%)

Query: 57  VSRILELIEIQKCYC--------PEDVALSVIQAYGKNSMPDKALDVFQ--------RMN 100
           +SRI  L+ +++C           +D+  +V++    N  P  +L  FQ        R N
Sbjct: 10  ISRICRLVLLRRCNAISKLNFVFSDDIVDAVLRNLRLN--PTASLGFFQFVSKQQNFRPN 67

Query: 101 EIFGCE-AGILCRKRQFEKAKRFLNSL-------------WEK--------GLKPDVYSY 138
               C+   IL R R +++ + +LN L             W++           P V+  
Sbjct: 68  VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD- 126

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             ++   V+ G    AL VFD M + G   ++   N L++   K G+   A  ++++++ 
Sbjct: 127 -MILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI- 184

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              + P+V   ++M+N  CK G+ DE      +M+    E +  TY S I+G    G+VE
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
            A+ V + M E G+  + VTY  +I G+C+  K+ E  ++   M  +  L  +  +Y +L
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I G    GK+D+A+ + + +       +      LING CK G          E+ E   
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG----------EIHE--- 351

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                A  ++ RM     K ++Y+ N+L++G+ +      A  L  +M ++G  PTV++Y
Sbjct: 352 -----AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NTL+ GLC+V  F +A      M+++G  PD + YS L++GL + +  + A  L    L 
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +GFT     +N +I GLC  GK+ +A +++  MK   C P+ +TY TL+DG  K  +  +
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           A ++   +  E + P I  YN  + GL    R+ +  + L +   RG+ P  +T+  L+
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/612 (26%), Positives = 286/612 (46%), Gaps = 34/612 (5%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           NP  +L  F   +++  +  +   +  +          VH+     + +  + Y  + V 
Sbjct: 47  NPTASLGFFQFVSKQQNFRPNVKSYCKL----------VHILSRGRMYDETRAYLNQLVD 96

Query: 77  LSVIQAYGKNSMPDKALDVFQRMN---EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           L   +  G N + D+ + V++       +F     +   K   + A    +++ + G  P
Sbjct: 97  LCKFKDRG-NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP 155

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
            + S  +++N LVK+G+   A  V+ +M   G+  +V   +I+++ F K G    A    
Sbjct: 156 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 215

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           +++     V PN+VTY+ +ING    G  +    +   M +    ++  TY   I G CK
Sbjct: 216 KKM-ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274

Query: 254 AGNVEGAERVYREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
              ++ AE+V R M E    V D   Y  +IDG+CR GKI +   L + M R G   N+ 
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE- 370
             N LI G  + G++ EA  +   + + N   DS ++  L++G C+ G+ ++A  + ++ 
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394

Query: 371 VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           ++EG E                G   DA  + + M K G   +    ++L++G  +    
Sbjct: 395 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 454

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  L+K++  +G + + +++NT+I+GLCK+ +  EA     +M + G  PD ITY  L
Sbjct: 455 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 514

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G C++  +  A K+     ++  +P + MYN LI GL  + ++ +   L + M  R  
Sbjct: 515 IDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGL 574

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN+VTY  L+DG  K G  DKA   +  + E  L  +II  +  + GL    R+ +A  
Sbjct: 575 TPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANL 634

Query: 595 FLNDALCRGILP 606
            +   +  G  P
Sbjct: 635 LMQKMVDHGFFP 646



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 134/259 (51%), Gaps = 3/259 (1%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            +LN + + GE   A    +  +M + G   + +  + ++N F +  K++ A    K+M 
Sbjct: 162 SLLNNLVKNGETHTAHY--VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME 219

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P +V+Y++LING   +     A   +K M EKG   +++TY+LLI G C+  K+D
Sbjct: 220 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 279

Query: 486 MALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A K+     ++    PD   Y +LI G C  GK++DA++L   M +     NL   N+L
Sbjct: 280 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 339

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++G  K G+  +A  +   +++  L+PD  SYN  L G C     S+AF   +  L  GI
Sbjct: 340 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 399

Query: 605 LPTTITWHILVRAVMNNGA 623
            PT +T++ L++ +   GA
Sbjct: 400 EPTVLTYNTLLKGLCRVGA 418



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 87/376 (23%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDK 91
           G+  S   F+ ++  L     +V    I + ++   C  P+ +   ++I  Y K S   +
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC-SPDGITYRTLIDGYCKASNVGQ 526

Query: 92  ALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  V   M         E++      L + R+  +    L  +  +GL P++ +YG +I+
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV------ 197
           G  K G L  A + + EM E G+  N++  + ++ G ++ G    A  + +++V      
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646

Query: 198 -------------------------METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
                                     +T + PN + YN+ I GLCK G+ D+    +  +
Sbjct: 647 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 706

Query: 233 KKNEREKDSFTYCSFIHG-----------------------------------LCKAGNV 257
                  D+FTYC+ IHG                                   LCK+ NV
Sbjct: 707 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILI 317
           + A+R++ ++ + G+F + VTYN +IDG+C+ G +   F+L + M  +G    +  N+L 
Sbjct: 767 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNLL- 825

Query: 318 RGLLENGKVDEAISIW 333
                     E++S+W
Sbjct: 826 ----------ESVSMW 831


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 268/533 (50%), Gaps = 56/533 (10%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     L E+ L P+  +Y  +I+G  K GD+     +  EM E+ +  NV+ Y+ ++D
Sbjct: 211 AEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVD 270

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G+ KKG    A ++  ++V + ++ PNV  Y  +I+G  K  +    L+++  MK    E
Sbjct: 271 GYTKKGLLNEAMDVMRKMV-QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           +++F   SF++ L ++G +E A+ ++++M+  G+  D V Y +M+DGF +AGK  + F +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M  K    +VV+YN+LI GL + GK  E+ S    +R+     DS T   +IN  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G L  A+++LNE                  M  +G K N+ TCN L+     A ++E  
Sbjct: 449 EGNLGNALKLLNE------------------MKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 418 IFLFKEMSRKGCSPT-----------------------------------VVSYNTLING 442
           + L  +M   G  PT                                   + +YNTLI+ 
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIST 550

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C++     A    K+M+ KG   D+ITY+ LI+G C S  +  A  +  Q L +G +P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YNIL+ GL +A  +++A  L + MK+R  VPN  TY+ L+ G  K G+  + ++++ 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ++ +   P   +YN+ +       +MS A E + +   RGI P + T+ IL+
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 263/515 (51%), Gaps = 20/515 (3%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R LN+     ++  V  +  +I+G  ++G++  A+ + + M   G   ++V YN L++GF
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K GD   AK++   + +  ++ PNV+TY  +I+  CK    ++ L M+D M       D
Sbjct: 63  CKIGDLFTAKKLMGEISL-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   ++GLCK+G VE A+ V+REM E G+  +  +Y  +ID   + G + E F L  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G   +VV Y  L+ GL + G  + A  ++++L E++   +  T+  LI+G CK G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +NK   +L E+EE                   +G L +A  ++ +M +     N +   
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G+ +A +   A+ LFKEM  +G        ++ +N L +  R  EA    K+M+ +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD + Y+ +++G  ++ K   A  +  +  +K    DV  YN+LI+GL   GK E  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
              ++ M++    P+  T+NT+++   K G+   AL++ N +    L+P+ I+ NI ++ 
Sbjct: 422 -SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           LC+   +    + LND L  G  PT  T   ++ A
Sbjct: 481 LCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 218/455 (47%), Gaps = 57/455 (12%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V  +NV+I+G C+ G     +E+ + MK      D  TY + ++G CK G++  A+++ 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            E+    +  + +TY  +ID +C++  +++   +++ M  K  + +VV+Y  ++ GL ++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GKV+EA S++  + E     +  ++  LI+ L K                  EG +A+A 
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK------------------EGNVAEAF 177

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  RM   G   +     +LM+G  +A    NA  +F+ +  +   P  V+Y+ LI+G 
Sbjct: 178 VLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGH 237

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+    +    ++EM EK   P++I YS +++G  +   ++ A+ +  + +Q+   P+V
Sbjct: 238 CKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNV 297

Query: 504 TMYNILIHG-----------------------------------LCSAGKVEDALQLYSN 528
            +Y  LI G                                   L  +G++E+A +L+ +
Sbjct: 298 FVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  R  +P+ V Y ++MDG FK G    A  I   + E+    D+++YN+ + GL    +
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417

Query: 589 M-SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             S++F      L  G+ P + T++ ++ A    G
Sbjct: 418 YESESFHTGMRQL--GLAPDSATFNTMINAYCKEG 450



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 230/503 (45%), Gaps = 44/503 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K      ALD+F+ M        N +       L R  + E+A      +  +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL PD  +Y ++++G  K+G    A  +  EM E+    +VV YN+LI+G FK G Y   
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--E 419

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E +   + +  + P+  T+N MIN  CK G     L++ + MK    + +S T    + 
Sbjct: 420 SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC---RAGKIKECFELWEVMGRKG 306
            LC AG +E    +  +M+  G      T+ A++D      RA  I    +    MG K 
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVK- 538

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI- 365
            L++ +YN LI      G +  A  +++ +  K   AD  T+  LI+G C + +L KA  
Sbjct: 539 -LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 366 ---QILNE-----VEE-----GG--EGRL-ADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
              Q+L E     VE      GG    RL  +AA LVN+M + G   NA T + L++G  
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   ++  + L+ EM  KG  P   +YN LI+   K ++  +A   ++EM  +G  P+  
Sbjct: 658 KIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSS 717

Query: 470 TYSLLING---LCQSKKIDMALKLCCQ---------FLQKGFTPDVTMYNILIHGLCSAG 517
           TY +LI G   L +  +++ +LK   Q           +KGF P       +   L   G
Sbjct: 718 TYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPG 777

Query: 518 KVEDALQLYSNMKKRNCVPNLVT 540
           K  DA ++ + + K+  V  L+ 
Sbjct: 778 KKADAQRILNKLYKKKTVQELLA 800


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/567 (28%), Positives = 274/567 (48%), Gaps = 57/567 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + EK+     ++  +G+ PDVY + T IN   K G +  A+ +F +M + GV  N
Sbjct: 289 LVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 347

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN LI G  K G+   A    E++V +  V   ++TY+V+INGL K  +F+E   + 
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKD-GVNATLITYSVLINGLMKLEKFNEANSVL 406

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
               +     +   Y + I G CK GN+  A R+  +MV  GI  ++VT N++I GFC+ 
Sbjct: 407 KETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKI 466

Query: 290 GKIK--ECFELWEVMGRKGCLNVVSYNILIR----------------------------- 318
           G+++  EC  L E++ R   +N  ++  +I                              
Sbjct: 467 GQMEQAECI-LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 525

Query: 319 ------GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
                 GL + GK  +A+ +W  L EK   A+  T   LI+GLCK G + +A+++L ++ 
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           E G                 EG++ +   L   M K G + + +T N L++G  +  KL+
Sbjct: 586 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 645

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L+ E   +   P V +Y  +I+G CK ++  E      E+L +  + + + Y+ LI
Sbjct: 646 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 705

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
              C++     A KL      KG  P    Y+ LIHG+C+ G++EDA  L   M+K   +
Sbjct: 706 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 765

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PN+V Y  L+ G  K G  DK + +   +    + P+ I+Y + + G      M  A + 
Sbjct: 766 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 825

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L++ + +GI+P T+T+++L       G
Sbjct: 826 LHEMVGKGIVPDTVTYNVLTNGFCKEG 852



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 181/621 (29%), Positives = 302/621 (48%), Gaps = 46/621 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           NP TAL  F  A+   G+  +   +  ++R LI    V   +R+L +  I       D  
Sbjct: 158 NPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFV-SPARLLLIRLI-------DRK 209

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC--------------RKRQFEKAKRF 122
           L V+    KN   + A      +NE+   E+G+                R   F  A   
Sbjct: 210 LPVLFGDPKNRHIEIA-SAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGV 266

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
              L  KG+ P V +   +++ LVK+ +L  +  VF+ M  +GV  +V  ++  I+ F K
Sbjct: 267 FRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCK 325

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A +++  +  +  V PNVVTYN +I+GLCK G  DE     ++M K+       
Sbjct: 326 GGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 384

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I+GL K      A  V +E +E G   + V YN +IDG+C+ G + +   +   M
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG   N V+ N +I+G  + G++++A  I E +  +  + +      +I+ LC N   
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 504

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
             A++ L E+             L+  M     + N     +L+ G  +  K  +A+ L+
Sbjct: 505 ESALRFLREM-------------LLRNM-----RPNDGLLTTLVGGLCKEGKHSDAVELW 546

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             +  KG    +V+ N LI+GLCK     EA   +K+MLE+G+  D ITY+ LI+G C+ 
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K++   KL  + +++G  PD   YN+LIHG+C  GK+++A+ L++  K R+ VPN+ TY
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             ++DG  K    ++  +++  +L + L  + + YN  ++  C      +AF+  +D   
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 602 RGILPTTITWHILVRAVMNNG 622
           +GI PTT T+  L+  + N G
Sbjct: 727 KGIPPTTATYSSLIHGMCNIG 747



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 282/604 (46%), Gaps = 43/604 (7%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKL---VVHVSRILELIEIQKCY---------CPEDVAL 77
           R  G+ ++  +F  +  + + P +      +S +++  E++K Y            DV L
Sbjct: 256 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYL 315

Query: 78  --SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSL 126
             + I A+ K    + A+ +F  M E  G    +         LC+    ++A RF   +
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 374

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            + G+   + +Y  +INGL+K      A +V  E  E+G   N V YN LIDG+ K G+ 
Sbjct: 375 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  I   +V +  + PN VT N +I G CK G+ ++   + + M       +   + +
Sbjct: 435 GDALRIRGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            IH LC     E A R  REM+   +  +      ++ G C+ GK  +  ELW  +  KG
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N+V+ N LI GL + G + EA+ + + + E+    D  T+  LI+G CK G + +  
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 613

Query: 366 QILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           ++  E V++G E                G+L +A +L N         N YT   +++G+
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K+E    LF E+  +      V YNTLI   C+     EA+    +M  KG  P  
Sbjct: 674 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 733

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TYS LI+G+C   +++ A  L  +  ++G  P+V  Y  LI G C  G+++  + +   
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 793

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M   +  PN +TY  ++DG  K+GD   A ++ + ++ + + PD ++YN+   G C   +
Sbjct: 794 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 853

Query: 589 MSDA 592
           + + 
Sbjct: 854 IEEG 857



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 168/335 (50%), Gaps = 19/335 (5%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
            G LC++ +   A      L EKG   ++ +   +I+GL K+G++  A+ +  +M ERG 
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             + + YN LI G  K+G      ++   +V +  + P+  TYN++I+G+C+ G+ DE +
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +W+  K  +   + +TY   I G CKA  +E  E+++ E++   + +++V YN +I  +
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G   E F+L + M  KG      +Y+ LI G+   G++++A  + + +R++    + 
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNR 388
             +  LI G CK G ++K + +L E+                      G +  AA L++ 
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           M   G   +  T N L NGF +  K+E    L ++
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 243/465 (52%), Gaps = 20/465 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           E    PD +SY  VI GL +SG    AL VFDEM +RGV  N + YN +IDG  K GD  
Sbjct: 188 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLE 247

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
               + +++ ++    PNVVTYNV+++GLC+ GR DE   + D M       D FTY   
Sbjct: 248 AGFRLRDQM-LQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSIL 306

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             GL + G+      ++ E ++ G+ + A T + +++G C+ GK+ +  ++ E++   G 
Sbjct: 307 FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366

Query: 308 LNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +   + YN LI G  +   +  A SI+E ++ ++   D  T+  LINGLCK       ++
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK-------ME 419

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++ E E+           LV  M+K G   +  T N+L++ + +A +LE    +  +M  
Sbjct: 420 MITEAED-----------LVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQD 468

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG    V+S+ +++   CK  +  EA + + +M+ K   P+   Y+ +I+   +S   + 
Sbjct: 469 KGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQ 528

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L  +    G +  +  YN+L+ GLC   ++++A +L  N+  +   P++V+YNT++ 
Sbjct: 529 AFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIIS 588

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                GD D+ALE+   + +  +RP + +Y+  L  L S  R+ D
Sbjct: 589 ACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHD 633



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 233/471 (49%), Gaps = 25/471 (5%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+L++     G +   +  +  LV      P+   +N  +      G  DE L M  RM 
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLV-AAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMG 185

Query: 234 KNE--REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++E     D+F+Y   I GL ++G    A +V+ EMV+ G+  + +TYN MIDG  + G 
Sbjct: 186 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGD 245

Query: 292 IKECFELWEVM---GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           ++  F L + M   GRK   NVV+YN+L+ GL   G++DE  ++ + +   +   D  T+
Sbjct: 246 LEAGFRLRDQMLQDGRKP--NVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTY 303

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +L +GL + G     + +  E  + G                 +G++A A  ++  +  
Sbjct: 304 SILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 363

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G        N+L+NG+ Q   L+ A  +F++M  +   P  ++YN LINGLCK+E   E
Sbjct: 364 TGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITE 423

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   V EM + G  P + T++ LI+   ++ +++    +      KG   +V  +  ++ 
Sbjct: 424 AEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVK 483

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  GK+ +A+ +  +M  ++ VPN   YN+++D   ++G  ++A  +   +    +  
Sbjct: 484 AFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSA 543

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I +YN+ LKGLC  S++ +A E + +   +G+ P  ++++ ++ A  N G
Sbjct: 544 SIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 202/427 (47%), Gaps = 21/427 (4%)

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           S  P++ + N+++  L   GR  +    +  +       D+F +   +     AG+++ A
Sbjct: 118 SPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEA 177

Query: 261 ERVYREM--VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
             + R M   E     DA +YN +I G  R+GK  +  ++++ M  +G   N ++YN +I
Sbjct: 178 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G ++ G ++    + + + +     +  T+ VL++GLC+                   G
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCR------------------AG 279

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R+ +  +L++ M  +    + +T + L +G  +       + LF E  +KG      + +
Sbjct: 280 RMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCS 339

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            L+NGLCK  +  +A   ++ ++  G  P    Y+ LING CQ + +  A  +  Q   +
Sbjct: 340 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR 399

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              PD   YN LI+GLC    + +A  L   M+K    P++ T+NTL+D   + G  +K 
Sbjct: 400 HIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             + + + ++ ++ ++IS+   +K  C   ++ +A   L+D + + ++P    ++ ++ A
Sbjct: 460 FTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDA 519

Query: 618 VMNNGAS 624
            + +G +
Sbjct: 520 YIESGGT 526


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 253/495 (51%), Gaps = 30/495 (6%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+YSY  +IN   +   L  ALAV  +M + G E ++V  + L++G      Y   K I 
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG------YCHGKRIS 151

Query: 194 ERLVMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           E + +   ++     PN VT+N +I+GL    +  E + + DRM     + D FTY + +
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +GLCK G+++ A  + ++M +  I  D V Y  +ID  C    + +   L+  M  KG  
Sbjct: 212 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 271

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NVV+YN LIR L   G+  +A  +   + E+  N +  T   LI+   K          
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 321

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   EG+L +A  L + M K     + +T +SL+NGF    +L+ A  +F+ M  K
Sbjct: 322 --------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            C P VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI GL Q+   DMA
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            K+  + +  G  PD+  Y+IL+ GLC  GK+E AL ++  ++K    P++ TYN +++G
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           + K G  +   +++  +  + ++P++I Y   + G C      +A     +    G LP 
Sbjct: 494 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553

Query: 608 TITWHILVRAVMNNG 622
           + T++ L+RA + +G
Sbjct: 554 SGTYNTLIRARLRDG 568



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 237/469 (50%), Gaps = 19/469 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G +PD+ +  +++NG      +  A+A+ D+MF    + N
Sbjct: 109 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 168

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N LI G F       A  + +R+V      P++ TY  ++NGLCK G  D  L + 
Sbjct: 169 TVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLL 227

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M+K + E D   Y + I  LC   NV  A  ++ EM   GI  + VTYN++I   C  
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 287

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +   L  +++ RK   NVV+++ LI   ++ GK+ EA  +++ + +++ + D  T+
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347

Query: 349 GVLINGLCKNGYLNKAIQIL---------------NEVEEG--GEGRLADAASLVNRMDK 391
             LING C +  L++A  +                N + +G     R+ +   L   M +
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 407

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  T N+L+ G  QA   + A  +FK+M   G  P +++Y+ L++GLCK  +  +
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    + + +   +PD+ TY+++I G+C++ K++    L C    KG  P+V +Y  +I 
Sbjct: 468 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 527

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           G C  G  E+A  L+  MK+   +PN  TYNTL+    + GD   + E+
Sbjct: 528 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 214/421 (50%), Gaps = 21/421 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC++   + A   L  + +  ++ DV  Y T+I+ L    ++  AL +F EM 
Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 266

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  NVV YN LI      G +  A  +   ++ E  + PNVVT++ +I+   K G+ 
Sbjct: 267 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKL 325

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  +++D M K   + D FTY S I+G C    ++ A+ ++  M+    F + VTYN +
Sbjct: 326 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 385

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC+A +++E  EL+  M ++G + N V+YN LI+GL + G  D A  I++ +     
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+ +L++GLCK G L KA+ +   ++                  K   + + YT 
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQ------------------KSKMEPDIYTY 487

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G  +A K+E+   LF  +S KG  P V+ Y T+I+G C+     EA +  +EM E
Sbjct: 488 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P+  TY+ LI    +      + +L  +    GF  D +  +++I+ L   G++E 
Sbjct: 548 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEK 606

Query: 522 A 522
           +
Sbjct: 607 S 607



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 216/435 (49%), Gaps = 24/435 (5%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   ++ +  +G +PD+++YGTV+NGL K GD+  AL++  +M +  +E +VV Y  +I
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 246

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D      +   A  ++  +     + PNVVTYN +I  LC  GR+ +   +   M + + 
Sbjct: 247 DALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 305

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             +  T+ + I    K G +  AE++Y EM++  I  D  TY+++I+GFC   ++ E   
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 365

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           ++E+M  K C  NVV+YN LI+G  +  +V+E + ++  + ++    ++ T+  LI GL 
Sbjct: 366 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 425

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           + G  + A +I                    +M   G   +  T + L++G  +  KLE 
Sbjct: 426 QAGDCDMAQKIFK------------------KMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +F+ + +    P + +YN +I G+CK  +  + +     +  KG KP++I Y+ +I+
Sbjct: 468 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 527

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+    + A  L  +  + G  P+   YN LI      G    + +L   M+    V 
Sbjct: 528 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 587

Query: 537 NLVT----YNTLMDG 547
           +  T     N L DG
Sbjct: 588 DASTISMVINMLHDG 602



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 132/239 (55%)

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           SL  RM       + Y+ N L+N F + S+L  A+ +  +M + G  P +V+ ++L+NG 
Sbjct: 85  SLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY 144

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C  +R  EA + V +M    ++P+ +T++ LI+GL    K   A+ L  + + +G  PD+
Sbjct: 145 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 204

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  +++GLC  G ++ AL L   M+K     ++V Y T++D L    + + AL ++  
Sbjct: 205 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 264

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  + +RP++++YN  ++ LC+  R SDA   L+D + R I P  +T+  L+ A +  G
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 323



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 126/245 (51%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA  L   M +     +    N L++   + +K +  I L + M     S  + SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LIN  C+  +   A + + +M++ G++PD++T S L+NG C  K+I  A+ L  Q    
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            + P+   +N LIHGL    K  +A+ L   M  R C P+L TY T+++GL K GD D A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + + ++  D++ Y   +  LC+   ++DA     +   +GI P  +T++ L+R 
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 618 VMNNG 622
           + N G
Sbjct: 284 LCNYG 288



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 160/328 (48%), Gaps = 16/328 (4%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL ++++ + NP+  T  AL D+  +E     +  L+  +++R IDP +  + S I 
Sbjct: 293 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI- 351

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                   +C  D        +      D   +V      I G      C+ ++ E+   
Sbjct: 352 ------NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-----FCKAKRVEEGME 400

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + ++GL  +  +Y T+I GL ++GD   A  +F +M   GV  +++ Y+IL+DG  
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 460

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G   +A  ++E L  ++ + P++ TYN+MI G+CK G+ ++  +++  +     + + 
Sbjct: 461 KYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + I G C+ G  E A+ ++REM E G   ++ TYN +I    R G      EL + 
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 579

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEA 329
           M   G +   S   ++  +L +G+++++
Sbjct: 580 MRSCGFVGDASTISMVINMLHDGRLEKS 607


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 178/634 (28%), Positives = 310/634 (48%), Gaps = 55/634 (8%)

Query: 23  ALFDSATREPGYAHSPHLFHHIL---RRLIDPKLVVHV------SRI--LELI------E 65
           AL D+A   P  A S  LF  ++   R  + P L+ +       SR+  L+L        
Sbjct: 60  ALSDAARHSPAVAIS--LFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRV 117

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ 115
           I+  +  E +  S +++A        +A+D+  R   + GC   +         LC + +
Sbjct: 118 IRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENR 177

Query: 116 FEKAKRFLNSLW-----EKGLKPDVYSYGTVINGLVKSGDLLG-ALAVFDEMFERGVETN 169
            ++A   L+++        G  PDV SY TVINGL++ G  L  A  +FD+M ++G+  +
Sbjct: 178 SQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPD 237

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I    K     +A  +  R+V +    PN +T+N +++G C  G+ ++ + ++
Sbjct: 238 VVTYNSIISALSKARAMDKAAVVLVRMV-KNGAMPNRITHNSLLHGYCSSGKPNDAIGVF 296

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RM ++  E D FTY + +  LCK G    A +++  MV+ G   ++ TY  ++ G+   
Sbjct: 297 KRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATE 356

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +   L ++M R G   +   +NILI    ++GKVD+A+ ++  +R +  N D+ T+
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTY 416

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           G++++ LC                    G++ DA +   R+   G   +A    +L++G 
Sbjct: 417 GIVMDALCM------------------VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               K + A  L  EM  +G  P  + +NTL+N LCK      A +    M+    + D+
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ LI+G C   K+D A KL    +  G  P+   YN +I+G C  G++EDA  L+  
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +   P +VTY+T++ GLF+      A E++  +++  ++ DI +YNI L GLC  + 
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             DA     +           T++I++ A++  G
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGG 672



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 260/515 (50%), Gaps = 32/515 (6%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           HLF  +L + + P +V + S I  L    K    +  A+ +++     +MP++       
Sbjct: 224 HLFDQMLDQGLSPDVVTYNSIISAL---SKARAMDKAAVVLVRMVKNGAMPNR----ITH 276

Query: 99  MNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
            + + G      C   +   A      +   G++PDV++Y T++  L K+G  + A  +F
Sbjct: 277 NSLLHG-----YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIF 331

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           D M +RG + N   Y  L+ G+  +G  ++   + + +V    + P+   +N++I    K
Sbjct: 332 DSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV-RNGIQPDHYIFNILIGTYTK 390

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G+ D+ + ++ +M++     D+ TY   +  LC  G V+ A   +  ++  G+  DAV 
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450

Query: 279 YNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +  +I G C   K  +  EL  E++GR  C N + +N L+  L + G V  A +I++L+ 
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
             +   D  T+  LI+G C +G +++A ++L       EG + D           G K N
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLL-------EGMVLD-----------GVKPN 552

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N+++NG+ +  ++E+A  LF++M+ KG +P +V+Y+T++ GL +  R   A     
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYL 612

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M++ G K D+ TY++++ GLCQ+   D AL++        F  +   +NI+I  L   G
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGG 672

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + ++A  L++++  R  VPN+VTY  +M  L + G
Sbjct: 673 RHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 227/475 (47%), Gaps = 29/475 (6%)

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM--ETSVYPNVVTYNVMING 215
           FDE+  R   +++V  N  +    +    + A  ++ R+VM     V PN++TY+V+I+ 
Sbjct: 42  FDELLHRPTTSSIVDLNRALSDAARHSPAV-AISLFRRMVMVARPKVPPNLITYSVVIDC 100

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC-KAGNVEGAERVYREMVESGIFV 274
             + G  D       R+ ++    ++ T+   +  LC K    E  +   R M   G   
Sbjct: 101 CSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTP 160

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVM-----GRKG-CLNVVSYNILIRGLLENGK-VD 327
           +  +Y  ++ G C   + ++   L   M      R G   +VVSYN +I GLL  G+ +D
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
            A  +++ + ++  + D  T+  +I+ L K   ++KA                  A ++ 
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA------------------AVVLV 262

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           RM K+G   N  T NSL++G+  + K  +AI +FK M R G  P V +YNTL+  LCK  
Sbjct: 263 RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG 322

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      M+++G KP+  TY  L++G      +     L    ++ G  PD  ++N
Sbjct: 323 RSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFN 382

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI      GKV+DA+ L+S M+++   P+ VTY  +MD L   G  D A+  +  ++ E
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L PD + +   + GLC+  +   A E   + + RGI P  I ++ L+  +   G
Sbjct: 443 GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 204/430 (47%), Gaps = 31/430 (7%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           A  +FDS  +  G+  +   +  +L        +V +  +L+++ ++    P+    ++ 
Sbjct: 327 ARKIFDSMVKR-GHKPNSATYGTLLHGYATEGSLVKMHHLLDMM-VRNGIQPDHYIFNIL 384

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I  Y K+   D A+ +F +M           +G     LC   + + A      L  +GL
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL 444

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PD   +  +I+GL        A  +  EM  RG+  N + +N L++   K+G   RAK 
Sbjct: 445 TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I++ L++   V  +V+TYN +I+G C  G+ DE  ++ + M  +  + +  TY + I+G 
Sbjct: 505 IFD-LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK G +E A  ++R+M   G+    VTY+ ++ G  +A +     EL+  M + G   ++
Sbjct: 564 CKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDI 623

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YNI++ GL +N   D+A+ I++ L   + + ++ T  ++I+ L K G  ++A  +   
Sbjct: 624 GTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFAS 683

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           +   G                 +G L +   L   ++K+GC  N+   N+L+   +Q  +
Sbjct: 684 LLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGE 743

Query: 414 LENA-IFLFK 422
           +  A ++L K
Sbjct: 744 VRKAGVYLSK 753



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 40/328 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +++KA+     +  +G+ P+   + T++N L K G +  A  +FD M    V+ +
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN LIDG+   G    A ++ E +V++  V PN VTYN MING CK GR ++   ++
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLD-GVKPNEVTYNTMINGYCKNGRIEDAFSLF 576

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA-------- 281
            +M          TY + + GL +A     A+ +Y  M++SGI  D  TYN         
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636

Query: 282 ---------------------------MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
                                      MID   + G+  E  +L+  +  +G + NVV+Y
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            ++++ L+E G ++E   ++  L +  C A+S     L+  L + G + KA   L++++E
Sbjct: 697 WLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDE 756

Query: 374 GG---EGRLADAASLVNRMDKHGCKLNA 398
                E   A++  L+    K+   +NA
Sbjct: 757 NNFSLEASTAESLVLLVSSGKYDQHINA 784


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 253/495 (51%), Gaps = 30/495 (6%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+YSY  +IN   +   L  ALAV  +M + G E ++V  + L++G      Y   K I 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG------YCHGKRIS 167

Query: 194 ERLVMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           E + +   ++     PN VT+N +I+GL    +  E + + DRM     + D FTY + +
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +GLCK G+++ A  + ++M +  I  D V Y  +ID  C    + +   L+  M  KG  
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NVV+YN LIR L   G+  +A  +   + E+  N +  T   LI+   K          
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 337

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   EG+L +A  L + M K     + +T +SL+NGF    +L+ A  +F+ M  K
Sbjct: 338 --------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            C P VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI GL Q+   DMA
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            K+  + +  G  PD+  Y+IL+ GLC  GK+E AL ++  ++K    P++ TYN +++G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           + K G  +   +++  +  + ++P++I Y   + G C      +A     +    G LP 
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569

Query: 608 TITWHILVRAVMNNG 622
           + T++ L+RA + +G
Sbjct: 570 SGTYNTLIRARLRDG 584



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 284/589 (48%), Gaps = 34/589 (5%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRR--LIDPKLVVHVS 58
           +V S  + ++L K       A  LF  + R   ++ + + +   L R  L+D KL   V 
Sbjct: 9   IVASQSKKMSLAKRFAQLRKASPLF--SLRGVYFSAASYDYREKLSRNVLLDLKLDDAVD 66

Query: 59  RILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGI 109
              E+++ +    P  V  + ++ A  K +  D  + + +RM  +        +      
Sbjct: 67  LFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G +PD+ +  +++NG      +  A+A+ D+MF    + N
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N LI G F       A  + +R+V      P++ TY  ++NGLCK G  D  L + 
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLL 243

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M+K + E D   Y + I  LC   NV  A  ++ EM   GI  + VTYN++I   C  
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +   L  +++ RK   NVV+++ LI   ++ GK+ EA  +++ + +++ + D  T+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 349 GVLINGLCKNGYLNKAIQIL---------------NEVEEG--GEGRLADAASLVNRMDK 391
             LING C +  L++A  +                N + +G     R+ +   L   M +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  T N+L+ G  QA   + A  +FK+M   G  P +++Y+ L++GLCK  +  +
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    + + +   +PD+ TY+++I G+C++ K++    L C    KG  P+V +Y  +I 
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           G C  G  E+A  L+  MK+   +PN  TYNTL+    + GD   + E+
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 214/421 (50%), Gaps = 21/421 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC++   + A   L  + +  ++ DV  Y T+I+ L    ++  AL +F EM 
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  NVV YN LI      G +  A  +   ++ E  + PNVVT++ +I+   K G+ 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKL 341

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  +++D M K   + D FTY S I+G C    ++ A+ ++  M+    F + VTYN +
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC+A +++E  EL+  M ++G + N V+YN LI+GL + G  D A  I++ +     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+ +L++GLCK G L KA+ +   ++                  K   + + YT 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQ------------------KSKMEPDIYTY 503

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G  +A K+E+   LF  +S KG  P V+ Y T+I+G C+     EA +  +EM E
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P+  TY+ LI    +      + +L  +    GF  D +  +++I+ L   G++E 
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEK 622

Query: 522 A 522
           +
Sbjct: 623 S 623



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 216/435 (49%), Gaps = 24/435 (5%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   ++ +  +G +PD+++YGTV+NGL K GD+  AL++  +M +  +E +VV Y  +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D      +   A  ++  +     + PNVVTYN +I  LC  GR+ +   +   M + + 
Sbjct: 263 DALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             +  T+ + I    K G +  AE++Y EM++  I  D  TY+++I+GFC   ++ E   
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           ++E+M  K C  NVV+YN LI+G  +  +V+E + ++  + ++    ++ T+  LI GL 
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           + G  + A +I                    +M   G   +  T + L++G  +  KLE 
Sbjct: 442 QAGDCDMAQKIFK------------------KMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +F+ + +    P + +YN +I G+CK  +  + +     +  KG KP++I Y+ +I+
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+    + A  L  +  + G  P+   YN LI      G    + +L   M+    V 
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603

Query: 537 NLVT----YNTLMDG 547
           +  T     N L DG
Sbjct: 604 DASTISMVINMLHDG 618



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 132/239 (55%)

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           SL  RM       + Y+ N L+N F + S+L  A+ +  +M + G  P +V+ ++L+NG 
Sbjct: 101 SLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY 160

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C  +R  EA + V +M    ++P+ +T++ LI+GL    K   A+ L  + + +G  PD+
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  +++GLC  G ++ AL L   M+K     ++V Y T++D L    + + AL ++  
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  + +RP++++YN  ++ LC+  R SDA   L+D + R I P  +T+  L+ A +  G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 126/245 (51%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA  L   M +     +    N L++   + +K +  I L + M     S  + SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LIN  C+  +   A + + +M++ G++PD++T S L+NG C  K+I  A+ L  Q    
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            + P+   +N LIHGL    K  +A+ L   M  R C P+L TY T+++GL K GD D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + + ++  D++ Y   +  LC+   ++DA     +   +GI P  +T++ L+R 
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 618 VMNNG 622
           + N G
Sbjct: 300 LCNYG 304



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 160/328 (48%), Gaps = 16/328 (4%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL ++++ + NP+  T  AL D+  +E     +  L+  +++R IDP +  + S I 
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI- 367

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                   +C  D        +      D   +V      I G      C+ ++ E+   
Sbjct: 368 ------NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-----FCKAKRVEEGME 416

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + ++GL  +  +Y T+I GL ++GD   A  +F +M   GV  +++ Y+IL+DG  
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G   +A  ++E L  ++ + P++ TYN+MI G+CK G+ ++  +++  +     + + 
Sbjct: 477 KYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + I G C+ G  E A+ ++REM E G   ++ TYN +I    R G      EL + 
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEA 329
           M   G +   S   ++  +L +G+++++
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGRLEKS 623


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 268/533 (50%), Gaps = 56/533 (10%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+     L E+ L P+  +Y  +I+G  K GD+     +  EM E+ +  NV+ Y+ ++D
Sbjct: 211 AEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVD 270

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G+ KKG    A ++  ++V + ++ PNV  Y  +I+G  K  +    L+++  MK    E
Sbjct: 271 GYTKKGLLNEAMDVMRKMV-QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           +++F   SF++ L ++G +E A+ ++++M+  G+  D V Y +M+DGF +AGK  + F +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M  K    +VV+YN+LI GL + GK  E+ S    +R+     DS T   +IN  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G L  A+++LNE                  M  +G K N+ TCN L+     A ++E  
Sbjct: 449 EGNLGNALKLLNE------------------MKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 418 IFLFKEMSRKGCSPT-----------------------------------VVSYNTLING 442
           + L  +M   G  PT                                   + +YNTLI+ 
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C++     A    K+M+ KG   D+ITY+ LI+G C S  +  A  +  Q L +G +P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YNIL+ GL +A  +++A  L + MK+R  VPN  TY+ L+ G  K G+  + ++++ 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ++ +   P   +YN+ +       +MS A E + +   RGI P + T+ IL+
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 263/515 (51%), Gaps = 20/515 (3%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R LN+     ++  V  +  +I+G  ++G++  A+ + + M   G   ++V YN L++GF
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K GD   AK++   + +  ++ PNV+TY  +I+  CK    ++ L M+D M       D
Sbjct: 63  CKIGDLFTAKKLMGEISL-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   ++GLCK+G VE A+ V+REM E G+  +  +Y  +ID   + G + E F L  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G   +VV Y  L+ GL + G  + A  ++++L E++   +  T+  LI+G CK G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +NK   +L E+EE                   +G L +A  ++ +M +     N +   
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G+ +A +   A+ LFKEM  +G        ++ +N L +  R  EA    K+M+ +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD + Y+ +++G  ++ K   A  +  +  +K    DV  YN+LI+GL   GK E  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
              ++ M++    P+  T+NT+++   K G+   AL++ N +    L+P+ I+ NI ++ 
Sbjct: 422 -SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           LC+   +    + LND L  G  PT  T   ++ A
Sbjct: 481 LCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 218/455 (47%), Gaps = 57/455 (12%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V  +NV+I+G C+ G     +E+ + MK      D  TY + ++G CK G++  A+++ 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            E+    +  + +TY  +ID +C++  +++   +++ M  K  + +VV+Y  ++ GL ++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GKV+EA S++  + E     +  ++  LI+ L K                  EG +A+A 
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK------------------EGNVAEAF 177

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  RM   G   +     +LM+G  +A    NA  +F+ +  +   P  V+Y+ LI+G 
Sbjct: 178 VLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGH 237

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+    +    ++EM EK   P++I YS +++G  +   ++ A+ +  + +Q+   P+V
Sbjct: 238 CKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNV 297

Query: 504 TMYNILIHG-----------------------------------LCSAGKVEDALQLYSN 528
            +Y  LI G                                   L  +G++E+A +L+ +
Sbjct: 298 FVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  R  +P+ V Y ++MDG FK G    A  I   + E+    D+++YN+ + GL    +
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417

Query: 589 M-SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             S++F      L  G+ P + T++ ++ A    G
Sbjct: 418 YESESFHTGMRQL--GLAPDSATFNTMINAYCKEG 450



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 228/493 (46%), Gaps = 40/493 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K      ALD+F+ M        N +       L R  + E+A      +  +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL PD  +Y ++++G  K+G    A  +  EM E+    +VV YN+LI+G FK G Y   
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--E 419

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E +   + +  + P+  T+N MIN  CK G     L++ + MK    + +S T    + 
Sbjct: 420 SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
            LC AG +E    +  +M+  G      T+ A++D   ++ +      +  +++G    L
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI--- 365
           ++ +YN LI      G +  A  +++ +  K   AD  T+  LI+G C + +L KA    
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 366 -QILNE-----VEE-----GG--EGRL-ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            Q+L E     VE      GG    RL  +AA LVN+M + G   NA T + L++G  + 
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++  + L+ EM  KG  P   +YN LI+   K ++  +A   ++EM  +G  P+  TY
Sbjct: 660 GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719

Query: 472 SLLING---LCQSKKIDMALKLCCQ---------FLQKGFTPDVTMYNILIHGLCSAGKV 519
            +LI G   L +  +++ +LK   Q           +KGF P       +   L   GK 
Sbjct: 720 DILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKK 779

Query: 520 EDALQLYSNMKKR 532
            DA ++ + + K+
Sbjct: 780 ADAQRILNKLYKK 792


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 266/524 (50%), Gaps = 19/524 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+  +       L  KGL   + +  +++ GLVK G +  A  ++ E+   GV+ NV 
Sbjct: 39  QARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVY 98

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+I+   K       K     +  E  V+P+VVTYN +IN  C+ G  +E  E+ D 
Sbjct: 99  TLNIMINALCKNQKIENTKSFLSDM-EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 157

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M     +   FTY + I+GLCK G    A+ V  EM++ G+  D  TYN ++   CR   
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + +   +++ M  +G + ++VS++ LI  L +NG +D+A+  +  ++      D+  + +
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI G C+NG +++A+++ +E+ E G                 E  L++A  L   M + G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              + YT  +L+NG+ +   +  A+ LF+ M ++   P VV+YNTLI+G CK     +  
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               +M+ +   P+ I+Y +LING C    +  A +L  + ++KGF   +   N ++ G 
Sbjct: 398 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 457

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C AG    A +  SNM  +  VP+ +TYNTL++G  K  + D+A  + N +    L PD+
Sbjct: 458 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDV 517

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           I+YN+ L G     RM +A   +   + RG+ P   T+  L+  
Sbjct: 518 ITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 257/498 (51%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E  K FL+ + EKG+ PDV +Y T+IN   + G L  A  + D M  +G++  
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 166

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN +I+G  K G Y+RAK + + + ++  + P+  TYN+++   C+     +   ++
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILLVECCRNDNMMDAERIF 225

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       D  ++ + I  L K G ++ A + +R+M  +G+  D V Y  +I GFCR 
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  ++ + M  +GC L+VV+YN ++ GL +   + EA  ++  + E+    D  T 
Sbjct: 286 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING  K+G +NKA+                  +L   M +   K +  T N+L++GF
Sbjct: 346 TTLINGYSKDGNMNKAV------------------TLFEMMIQRNLKPDVVTYNTLIDGF 387

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + S++E    L+ +M  +   P  +SY  LING C +    EA+    EM+EKG++  +
Sbjct: 388 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 447

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           IT + ++ G C++     A +     L KG  PD   YN LI+G      ++ A  L + 
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 507

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+    +P+++TYN +++G  + G   +A  I   ++E  + PD  +Y   + G  + + 
Sbjct: 508 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 567

Query: 589 MSDAFEFLNDALCRGILP 606
           + +AF   ++ L RG +P
Sbjct: 568 LKEAFRVHDEMLQRGFVP 585



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 239/463 (51%), Gaps = 20/463 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+   E+A   ++S+  KGLKP V++Y  +INGL K+G  L A  V DEM + G+  + 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+    +  + M A+ I++ +  +  V P++V+++ +I  L K G  D+ L+ + 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK      D+  Y   I G C+ G +  A +V  EM+E G  +D VTYN +++G C+  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E  EL+  M  +G   +  ++  LI G  ++G +++A++++E++ ++N   D  T+ 
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK   + K  ++ N+                  M       N  +   L+NG+ 
Sbjct: 382 TLIDGFCKGSEMEKVNELWND------------------MISRRIYPNHISYGILINGYC 423

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  L+ EM  KG   T+++ NT++ G C+     +A  F+  ML KG  PD I
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING  + + +D A  L  +    G  PDV  YN++++G    G++++A  +   M
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            +R   P+  TY +L++G     +  +A  + + +L+    PD
Sbjct: 544 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 235/459 (51%), Gaps = 27/459 (5%)

Query: 186 YMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           Y++A+++ E     R++    +  ++   N ++ GL K G  D   E++  + ++  + +
Sbjct: 37  YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 96

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +T    I+ LCK   +E  +    +M E G+F D VTYN +I+ +CR G ++E FEL +
Sbjct: 97  VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 301 VMGRKGCLN-VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  KG    V +YN +I GL + GK   A  + + + +   + D+ T+ +L+   C+N 
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216

Query: 360 YLNKAIQILNEV-EEGGEGRLADAASLVNRMDKHGCKLNA------------------YT 400
            +  A +I +E+  +G    L   ++L+  + K+GC   A                  YT
Sbjct: 217 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 276

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L+ GF +   +  A+ +  EM  +GC   VV+YNT++NGLCK +   EA     EM 
Sbjct: 277 I--LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E+G  PD  T++ LING  +   ++ A+ L    +Q+   PDV  YN LI G C   ++E
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 394

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
              +L+++M  R   PN ++Y  L++G    G   +A  +W+ ++E+     II+ N  +
Sbjct: 395 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           KG C       A EFL++ L +GI+P  IT++ L+   +
Sbjct: 455 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 195/402 (48%), Gaps = 32/402 (7%)

Query: 3   ISAKRLLN-LLKAEKNPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           + AK +L+ +LK   +P TA    L     R      +  +F  +  + + P LV   S 
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV-SFSA 242

Query: 60  ILELIEIQKCY---------------CPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIF 103
           ++ L+    C                 P++V  ++ I  + +N +  +AL V   M E  
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ- 301

Query: 104 GCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           GC   +         LC+++   +A      + E+G+ PD Y++ T+ING  K G++  A
Sbjct: 302 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 361

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           + +F+ M +R ++ +VV YN LIDGF K  +  +  E+W  ++    +YPN ++Y ++IN
Sbjct: 362 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI-SRRIYPNHISYGILIN 420

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           G C  G   E   +WD M +   E    T  + + G C+AGN   A+     M+  GI  
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 480

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           D +TYN +I+GF +   +   F L   M   G L +V++YN+++ G    G++ EA  I 
Sbjct: 481 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 540

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
             + E+  N D +T+  LING      L +A ++ +E+ + G
Sbjct: 541 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 179/366 (48%), Gaps = 20/366 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+L +    ++A ++   +   GL PD   Y  +I G  ++G +  AL V DEM 
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+G   +VV YN +++G  K+     A E++  +  E  V+P+  T+  +ING  K G  
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT-ERGVFPDFYTFTTLINGYSKDGNM 358

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++ + +++ M +   + D  TY + I G CK   +E    ++ +M+   I+ + ++Y  +
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 418

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+C  G + E F LW+ M  KG    +++ N +++G    G   +A      +  K  
Sbjct: 419 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  LING  K   +++A                   +LVN+M+  G   +  T 
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAF------------------ALVNKMENSGLLPDVITY 520

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF +  +++ A  +  +M  +G +P   +Y +LING        EA+    EML+
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580

Query: 462 KGWKPD 467
           +G+ PD
Sbjct: 581 RGFVPD 586



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 2/252 (0%)

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           V + G  R+    SLV  +    C  N    + L+  ++QA KL      F+ +  KG  
Sbjct: 2   VRKSGVSRVEIVESLV--LTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLC 59

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
            ++ + N+L+ GL KV     A+   +E++  G + ++ T +++IN LC+++KI+     
Sbjct: 60  VSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSF 119

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                +KG  PDV  YN LI+  C  G +E+A +L  +M  +   P + TYN +++GL K
Sbjct: 120 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 179

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           TG   +A  + + +L+  + PD  +YNI L   C    M DA    ++   +G++P  ++
Sbjct: 180 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239

Query: 611 WHILVRAVMNNG 622
           +  L+  +  NG
Sbjct: 240 FSALIGLLSKNG 251


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 163/542 (30%), Positives = 268/542 (49%), Gaps = 29/542 (5%)

Query: 90  DKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +KA D+F  M         + + C      + +  EKA   L  + ++ L  + Y  G +
Sbjct: 389 EKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAI 448

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +NGL   GDL  A  +F EM   G++ N+V Y  ++ G  K+G +  A +I   ++ +  
Sbjct: 449 VNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL-GVMKDQG 507

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+V  YN +I G CK G+ +E       M     + + +TY +FIHG C+AG ++ AE
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           R + EM++SGI  + V    +IDG+C+ G   + F  +  M  +G L +V ++++LI GL
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            +NGK+ EA+ ++  L +K    D  T+  LI+ LCK                  EG L 
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK------------------EGDLK 669

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
            A  L + M K G   N  T N+L+NG  +  ++  A  LF  +  KG +   V+Y+T+I
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTII 729

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            G CK     EA+     M   G  PD   Y  LI+G C++   + AL L    +++G  
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA 789

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                +N LI G    GK+ +A QL  +M   +  PN VTY  L++     G+  +A ++
Sbjct: 790 -STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  + +  + P++++Y   L G     R S+ F   ++ + RGI P  + W ++V A + 
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLK 908

Query: 621 NG 622
            G
Sbjct: 909 EG 910



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 272/541 (50%), Gaps = 55/541 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + E+ K  L  + EKG  P++ +Y  VI GL ++GD+  AL +   M  +G+  + 
Sbjct: 243 CRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDN 302

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  LIDGF ++      K + + +     + P+ V Y  +ING  K        ++ +
Sbjct: 303 YIYATLIDGFCRQKRSTEGKSMLDEMYT-MGLKPDHVAYTALINGFVKQSDIGGAFQVKE 361

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN---------- 280
            M   + + ++FTY + IHGLCK G++E AE ++ EM   GI  D  TYN          
Sbjct: 362 EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421

Query: 281 -------------------------AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
                                    A+++G C  G +    EL++ M   G   N+V Y 
Sbjct: 422 NMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYT 481

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +++GL++ G+ +EAI I  +++++  + D   +  +I G CK G          ++EEG
Sbjct: 482 TIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG----------KMEEG 531

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                    S +  M   G K N YT  + ++G+ +A +++ A   F EM   G +P  V
Sbjct: 532 --------KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
               LI+G CK     +A++  + ML++G  PD+ T+S+LI+GL ++ K+  A+ +  + 
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L KG  PDV  Y  LI  LC  G ++ A +L+ +M K+   PN+VTYN L++GL K G+ 
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KA E+++ I E+ L  + ++Y+  + G C  + +++AF+  +     G+ P +  +  L
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 615 V 615
           +
Sbjct: 764 I 764



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 274/550 (49%), Gaps = 23/550 (4%)

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           K SM +K L      N I+       CR+++  + K  L+ ++  GLKPD  +Y  +ING
Sbjct: 290 KRSMANKGL---LPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
            VK  D+ GA  V +EMF R ++ N   Y  LI G  K GD  +A++++  + M   + P
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM-MGIKP 405

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++ TYN +I G  K    ++  E+   +KK     +++   + ++GLC  G++  A  ++
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF 465

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLEN 323
           +EM+  G+  + V Y  ++ G  + G+ +E  ++  VM  +G   +V  YN +I G  + 
Sbjct: 466 QEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA 525

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           GK++E  S    +  K    +  T+G  I+G C+ G +  A +   E+ + G        
Sbjct: 526 GKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVIC 585

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                    +G    A +    M   G   +  T + L++G  +  KL+ A+ +F E+  
Sbjct: 586 TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P V +Y +LI+ LCK      A+    +M +KG  P+++TY+ LINGLC+  +I  
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAK 705

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +L     +KG   +   Y+ +I G C +  + +A QL+  MK     P+   Y  L+D
Sbjct: 706 ARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  K G+ +KAL ++  ++EE +     ++N  + G     ++ +A++ + D +   I P
Sbjct: 766 GCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITP 824

Query: 607 TTITWHILVR 616
             +T+ IL+ 
Sbjct: 825 NHVTYTILIE 834



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 249/501 (49%), Gaps = 19/501 (3%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PDVY+Y  +IN   + G +     V  +M E+G   N+V Y+++I G  + GD   A E+
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +R +    + P+   Y  +I+G C+  R  E   M D M     + D   Y + I+G  
Sbjct: 290 -KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFV 348

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K  ++ GA +V  EM    I ++  TY A+I G C+ G +++  +L+  M   G   ++ 
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN LI G  +   +++A  +   ++++N  A++   G ++NGLC  G L +A ++  E+
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
              G                 EGR  +A  ++  M   G   + +  N+++ GF +A K+
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E       EM  KG  P V +Y   I+G C+      A     EML+ G  P+ +  + L
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G C+      A       L +G  PDV  +++LIHGL   GK+++A+ ++S +  +  
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL 648

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           VP++ TY +L+  L K GD   A E+ + + ++ + P+I++YN  + GLC    ++ A E
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARE 708

Query: 595 FLNDALCRGILPTTITWHILV 615
             +    +G+   ++T+  ++
Sbjct: 709 LFDGIPEKGLARNSVTYSTII 729



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 274/550 (49%), Gaps = 34/550 (6%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKAL--DVF 96
            LF  ++   + P +V++ + +  L++       E      I+  G   M D+ L  DVF
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVK-------EGRFEEAIKILG--VMKDQGLSPDVF 513

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                I G      C+  + E+ K +L  +  KGLKP+VY+YG  I+G  ++G++  A  
Sbjct: 514 CYNTVIIG-----FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
            F EM + G+  N V    LIDG+ K G+  +A   + R +++  V P+V T++V+I+GL
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKF-RCMLDQGVLPDVQTHSVLIHGL 627

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            K G+  E + ++  +       D FTY S I  LCK G+++ A  ++ +M + GI  + 
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
           VTYNA+I+G C+ G+I +  EL++ +  KG   N V+Y+ +I G  ++  + EA  ++  
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQI-LNEVEEGGE---------------GRL 379
           ++      DS  +  LI+G CK G   KA+ + L  VEEG                 G+L
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKL 807

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            +A  LV  M  +    N  T   L+        ++ A  LF EM ++   P V++Y +L
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++G  ++ R  E +S   EM+ +G KPD + +S++++   +      ALKL    L +G 
Sbjct: 868 LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
                +Y ILI  LC    + + L++   ++K+    +L T  TL+    + G  D+AL 
Sbjct: 928 NVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALR 987

Query: 560 IWNHILEERL 569
           +   ++   L
Sbjct: 988 VLESMVRSFL 997



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 215/443 (48%), Gaps = 18/443 (4%)

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M  ++ P+V TY  +IN  C+ G+ +E   +   M++     +  TY   I GLC+AG+V
Sbjct: 224 MLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDV 283

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
           + A  + R M   G+  D   Y  +IDGFCR  +  E   + + M   G   + V+Y  L
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I G ++   +  A  + E +  +    ++ T+  LI+GLCK G L KA  + +E+   G 
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 376 -----------EG-----RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                      EG      +  A  L+  + K     NAY C +++NG      L  A  
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+EM   G  P +V Y T++ GL K  RF EA   +  M ++G  PD+  Y+ +I G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ K++       + + KG  P+V  Y   IHG C AG+++ A + +  M      PN V
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
               L+DG  K G+  KA   +  +L++ + PD+ ++++ + GL    ++ +A    ++ 
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           L +G++P   T+  L+  +   G
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEG 666



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 200/468 (42%), Gaps = 49/468 (10%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           + ILID + KKG    A           SV+    T N  I GL  C    +     D +
Sbjct: 166 FEILIDIYRKKGFLNEA----------VSVFLGAKT-NEFIVGLACCNSLSK-----DLL 209

Query: 233 KKNERE--------------KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           K N  E               D +TY + I+  C+ G VE  + V  +M E G   + VT
Sbjct: 210 KGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVT 269

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y+ +I G CRAG + E  EL   M  KG L +   Y  LI G     +  E  S+ + + 
Sbjct: 270 YSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMY 329

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
                 D   +  LING  K   +  A Q+  E                  M     KLN
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEE------------------MFARKIKLN 371

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +T  +L++G  +   LE A  LF EM+  G  P + +YN LI G  KV+   +AY  + 
Sbjct: 372 TFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLI 431

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           E+ ++    +      ++NGLC    +  A +L  + +  G  P++ +Y  ++ GL   G
Sbjct: 432 EIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEG 491

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + E+A+++   MK +   P++  YNT++ G  K G  ++       ++ + L+P++ +Y 
Sbjct: 492 RFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYG 551

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             + G C    M  A     + L  GI P  +    L+     +G +T
Sbjct: 552 AFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 207/475 (43%), Gaps = 76/475 (16%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM--KKNEREK--DSFTYC---------- 245
           T    N+ T++++   LC  G F     + +RM   +N   K  DS   C          
Sbjct: 101 TVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSS 160

Query: 246 --------------------------------SFIHGLC----------KAGNVEGAERV 263
                                            FI GL           K   VE   +V
Sbjct: 161 SSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKV 220

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y+ M+   I  D  TY  +I+ +CR GK++E   +   M  KGC+ N+V+Y+++I GL  
Sbjct: 221 YKGML-GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCR 279

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G VDEA+ +   +  K    D+  +  LI+G C+                  + R  + 
Sbjct: 280 AGDVDEALELKRSMANKGLLPDNYIYATLIDGFCR------------------QKRSTEG 321

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            S+++ M   G K +     +L+NGF++ S +  A  + +EM  +       +Y  LI+G
Sbjct: 322 KSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHG 381

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK+    +A     EM   G KPD+ TY+ LI G  + + ++ A +L  +  ++  T +
Sbjct: 382 LCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTAN 441

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
             M   +++GLC  G +  A +L+  M      PN+V Y T++ GL K G  ++A++I  
Sbjct: 442 AYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG 501

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            + ++ L PD+  YN  + G C   +M +   +L + + +G+ P   T+   +  
Sbjct: 502 VMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 74/299 (24%)

Query: 86   NSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            + +P+K L    R +  +       C+     +A +  + +   G+ PD + Y  +I+G 
Sbjct: 711  DGIPEKGL---ARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767

Query: 146  VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV-------- 197
             K+G+   AL++F  M E G+ +    +N LIDGFFK G  + A ++ E +V        
Sbjct: 768  CKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826

Query: 198  --------------------------METSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
                                       + +V PNV+TY  +++G  + GR  E   ++D 
Sbjct: 827  VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886

Query: 232  MKKNEREKDSFT-----------------------------------YCSFIHGLCKAGN 256
            M     + D                                      Y   I  LCK  N
Sbjct: 887  MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946

Query: 257  VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            +    +V  E+ + G  +   T   ++  F RAG+  E   + E M R   LN++ +++
Sbjct: 947  LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR-SFLNLLEFSV 1004


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 173/581 (29%), Positives = 279/581 (48%), Gaps = 39/581 (6%)

Query: 72  PEDVALSVI------QAYGKNSMPDKALDVFQRMN----EIFGCEAGILCRKRQFEKAKR 121
           P+D A SVI      + +  NSM + A+DVF +      E+       L +       + 
Sbjct: 172 PKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRRE 231

Query: 122 FLNSLWEK----GLKPDVYSYGTVINGLVKSG------DLLGALAVFDEMFERGVETNVV 171
           FL SL+E+    G  P+V++Y  ++N   K        D   A  + +EM   G    VV
Sbjct: 232 FLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVV 291

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+  I G  + G Y+ +   + R ++  +   NV  YN +I+GLCK G  DE L++ + 
Sbjct: 292 TYSTYIYGLCRVG-YVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK      D +TY   IHG CK G+VE    +  EM  S +    V+Y+++  G C+   
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
                +++  +G  G   +  +Y+ILI+G    G +D A  + E +   N   D +    
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L++G CK G    A++  N + EGG                 EGR+ +A +L+N M   G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N +T N+++N   +  K E A+ LF  M ++   P+VV Y+TLI+G  K     +A 
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
                ML+ G  PDM+ Y++LIN LC   ++  A  L  +  + G TPD   Y  +I G 
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G +  A  L++ M +R  +P +VTY +L+DG  K    D A  + + +  + + PD+
Sbjct: 651 CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDV 710

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++YN+ +        +  A E LN+    G+LP  +T+ +L
Sbjct: 711 VTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S K  + +V+ ++ LI           A     +  + G +    + + L+  L ++ + 
Sbjct: 171 SPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRR 230

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG------KVEDALQLYSNMKKRNCVPNL 538
           +    L  +    G  P+V  Y I+++  C             A ++   M++    P +
Sbjct: 231 EFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTV 290

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY+T + GL + G  + AL+    ++      ++  YN  + GLC    + +A + L +
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
               GI P   T+ IL+      G
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQG 374


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 167/609 (27%), Positives = 296/609 (48%), Gaps = 57/609 (9%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
           P++  ++++ +AY ++    +A++  + M E  G E  ++         C     E A+R
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEM-EGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGF 180
            L SL  KGL P+V +Y  ++ G  K G +  A  V  EM E G +  + V Y ++I+G+
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            ++G    A  +   +  +  ++ N+  YN MINGLCK GR +E  ++   M+      D
Sbjct: 335 CQRGRMDDATRVRNEM-RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            ++Y + I G C+ G++  A  + R MV +G+    +TYN ++ GFC    I +   LW 
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M ++G   N +S + L+ GL + GK ++A+++W+    +    +  T   +INGLCK G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            + +A ++L+ ++E                    G+L  A  L+N+M+  G   +    N
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           S + G   A +      +  EMS +G SP +V+Y  LI G CK     EA +   EM+  
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT------------------ 504
           G  P++   S L++   +  K+D A  +  + +     P  +                  
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 505 --------MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                   M+N++I GLC +G++ DA  L+ +++ +  +P+  TY++L+ G   +G  D+
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  + + +L   L P+II+YN  + GLC   ++S A    N    +GI P  IT++ L+ 
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 617 AVMNNGAST 625
                G +T
Sbjct: 814 EYCKEGKTT 822



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 267/584 (45%), Gaps = 40/584 (6%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILR-------RLIDPKLVVHVSRIL-E 62
           L +   +P  AL LF  A   P       L H + R       R +   L  H   +   
Sbjct: 77  LRRVRLDPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPH 136

Query: 63  LIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK--- 118
           L E+ + +    V+  ++ +A+        AL+VF  M ++ GC   +    R   K   
Sbjct: 137 LAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKV-GCRPSLRSCNRLLNKLVQ 195

Query: 119 ------AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
                 A      +   G+ PD ++   +     + G +  A+   +EM   G+E N+V 
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y+ ++D +   G    A+ I E L     + PNVVTY +++ G CK GR +E   +   M
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESL-QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314

Query: 233 KKN-EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           K+  +   D   Y   I+G C+ G ++ A RV  EM ++GI V+   YN MI+G C+ G+
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGR 374

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++E  ++ + M   G   +  SYN LI G    G + +A  +  ++      A + T+  
Sbjct: 375 MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNT 434

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L+ G C           L+ ++        DA  L   M K G   N  +C++L++G  +
Sbjct: 435 LLKGFCS----------LHAID--------DALRLWFLMLKRGVAPNEISCSTLLDGLFK 476

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A K E A+ L+KE   +G +  V+++NT+INGLCK+ R  EA   +  M E    PD +T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y  L +G C+  ++  A  L  +    GF P V M+N  I G   A +      ++S M 
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            R   PNLVTY  L+ G  K G+  +A  ++  ++   + P++ 
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 263/547 (48%), Gaps = 39/547 (7%)

Query: 89  PDKALDVFQ----RMNEIFGCEA-GILCRKRQFEKAKRFLNSLWEKG--LKP---DVY-- 136
           PD AL +F+    R + +   +   IL R R+F  A+  L+SL      L P   +VY  
Sbjct: 84  PDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRD 143

Query: 137 ------SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
                 S+  ++     +G L  AL VFD M + G   ++   N L++   + GD   A 
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++ ++ +   V P+  T  +M    C+ GR  + +E  + M+    E +   Y + +  
Sbjct: 204 MVYGQMRI-AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDC 262

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
            C  G  E A R+   +   G+  + VTY  ++ G+C+ G+++E   + + M   G + V
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 311 --VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             V+Y ++I G  + G++D+A  +   +R+   + +   +  +INGLCK G + +  ++L
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+E+ G            R DK       Y+ N+L++G+ +   +  A  + + M R G
Sbjct: 383 QEMEDVGM-----------RPDK-------YSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            + T ++YNTL+ G C +    +A      ML++G  P+ I+ S L++GL ++ K + AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + L +G   +V  +N +I+GLC  G++ +A +L   MK+  C P+ +TY TL DG 
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G    A  + N +      P +  +N  + G     +     +  ++   RG+ P  
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 609 ITWHILV 615
           +T+  L+
Sbjct: 605 VTYGALI 611



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 287/617 (46%), Gaps = 58/617 (9%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATR----EPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           +A+RLL    A  +P T  AL  +A R    +P  A   HLF     R   P LV H ++
Sbjct: 57  AAERLL----ASSSPLTP-ALLQAALRRVRLDPDAAL--HLFRLAPSR---PSLVSH-AQ 105

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIF------GCEAGILCRK 113
           +L ++   + +      LS        S+P  A  +F  + E++           +L R 
Sbjct: 106 LLHILARARRFHDARALLS--------SLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 114 R----QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
                Q   A    + + + G +P + S   ++N LV+SGD   A  V+ +M   GV  +
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
                I+   + + G   +A E  E +     +  N+V Y+ +++  C  G  ++   + 
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEME-GMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCR 288
           + +++     +  TY   + G CK G +E AERV +EM E+G I VD V Y  MI+G+C+
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++ +   +   M   G  +N+  YN +I GL + G+++E   + + + +     D  +
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G C+ G + KA +                  +   M ++G      T N+L+ G
Sbjct: 397 YNTLIDGYCREGSMRKAFE------------------MCRMMVRNGLAATTLTYNTLLKG 438

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F     +++A+ L+  M ++G +P  +S +TL++GL K  +  +A +  KE L +G   +
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +IT++ +INGLC+  ++  A +L  +  +    PD   Y  L  G C  G++  A  L +
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+     P++  +N+ + G F      K  +I + +    L P++++Y   + G C   
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 588 RMSDA----FEFLNDAL 600
            + +A    FE +N+ +
Sbjct: 619 NLHEACNLYFEMVNNGM 635


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 283/598 (47%), Gaps = 80/598 (13%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F S  +   Y      F+ ++      +    + ++L+ ++ +     E + + + +A 
Sbjct: 51  IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 110

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P +A++ F RM     C                          K  V S+ +V+N
Sbjct: 111 GKAHLPGEAVNFFHRMANDLHC--------------------------KQTVKSFNSVLN 144

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            +++ GD   A   +  +F                G   KG                   
Sbjct: 145 VIIQEGDFSYAFKFYLHVF----------------GANSKG-----------------FQ 171

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN++TYN++I  LCK G+ D  ++ +  M       D FTY + ++GLCK   V+ A  +
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM   G   + VT+N +ID   + G +    +L + M  KGC+ N V+YN LI GL  
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D+A+S+ E +    C  +  T+G +INGL K       + IL  +EE G+      
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ------ 345

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                       K N Y  +SL++G  +  K ENA+ L+KEM+ KGC P VV Y   I+G
Sbjct: 346 ------------KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 393

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+ E+  EA   ++EML KG+ P+  TYS L+ G  +      A+ +  + + +    +
Sbjct: 394 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 453

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V   ++L++GLC +G++ +AL ++++M      P++V Y++++ GL   G  DK L+++ 
Sbjct: 454 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 513

Query: 563 HIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +   E + RPD+++YNI    LC    ++ A + LN  L  G  P ++T +I +  +
Sbjct: 514 EMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 218/440 (49%), Gaps = 24/440 (5%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG-AERVYR 265
            T+  +I        F    ++ DRMK+  R      +   I   C   ++ G A   + 
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFI-LIFKACGKAHLPGEAVNFFH 124

Query: 266 EMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELW-EVMG--RKGCL-NVVSYNILIRGL 320
            M         V ++N++++   + G     F+ +  V G   KG   N+++YN++I+ L
Sbjct: 125 RMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKAL 184

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G++D A+  +  +  KNCN D  T+  L+NGLCK   +++A+ +L+E++  G     
Sbjct: 185 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 244

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G L+ AA LV+ M   GC  N  T N+L++G     KL+ A+ L ++
Sbjct: 245 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 304

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M    C P  V+Y T+INGL K  R  +    +  M E+G K +   YS LI+GL +  K
Sbjct: 305 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 364

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            + A++L  +  +KG  P+V +Y   I GLC   K ++A  +   M  +  +PN  TY++
Sbjct: 365 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           LM G FK GD  KA+ +W  ++ + +R +++  ++ L GLC   R+ +A       L  G
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 484

Query: 604 ILPTTITWHILVRAVMNNGA 623
           + P  + +  +++ + + G+
Sbjct: 485 LKPDVVAYSSMIKGLCDVGS 504



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 221/470 (47%), Gaps = 58/470 (12%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I+A  K    D+A+D F+ M  +  C   +         LC++R+ ++A   L+ +  +
Sbjct: 180 IIKALCKLGQIDRAVDTFREM-PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  ++  +I+ L K+GDL  A  + D MF +G   N V YN LI G   KG   +A
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + E++V    V PN VTY  +INGL K  R ++ + +   M++  ++ + + Y S I 
Sbjct: 299 LSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GL K G  E A R+++EM E G   + V Y A IDG CR  K  E  ++ + M  KG L 
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 417

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +Y+ L++G  + G   +AI +W+ +  ++   +     VL+NGLC++G L +A+ + 
Sbjct: 418 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477

Query: 369 NEVEEGGEGRLADAASL---------VNRMDKHGCKL-------------NAYTCNSLMN 406
             +   GEG   D  +          V  +DK G KL             +  T N L N
Sbjct: 478 THML--GEGLKPDVVAYSSMIKGLCDVGSVDK-GLKLFYEMQCQEPKSRPDVVTYNILFN 534

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNT---------------------LINGLCK 445
              +   L  AI L   M  +GC P  ++ N                      L+  L K
Sbjct: 535 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLK 594

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            ER   A   V+EML +   P+  T+S +I   C+ K+I   +  CC+ L
Sbjct: 595 RERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDECCRSL 644



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 21/319 (6%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELL---REKNCNADSTTHGVLINGLCKNGYLNKAI 365
            V S+N ++  +++ G    A   +  +     K    +  T+ ++I  LCK G +++A+
Sbjct: 135 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 194

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
               E                  M    C  + +T ++LMNG  +  +++ A+FL  EM 
Sbjct: 195 DTFRE------------------MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +GC P  V++N LI+ L K      A   V  M  KG  P+ +TY+ LI+GLC   K+D
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL L  + +     P+   Y  +I+GL    + ED + +  +M++R    N   Y++L+
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GLFK G  + A+ +W  + E+  +P+++ Y   + GLC   +  +A + L + L +G L
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 606 PTTITWHILVRAVMNNGAS 624
           P   T+  L++     G S
Sbjct: 417 PNAFTYSSLMKGFFKKGDS 435


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 291/557 (52%), Gaps = 30/557 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGILC--RKRQFEKAKRF 122
           P+DV   S+I    K +  D+A+++F++M +       +     I+      +F++A   
Sbjct: 301 PDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSL 360

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L     +G  P V +Y  ++  L K G L  AL  F+EM ++    N+  YN+LID   K
Sbjct: 361 LERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCK 419

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+   A ++ + +  E  ++PNV+T N+MI+ LCK  + DE   +++ M       D  
Sbjct: 420 AGEVEAAFKVRDAM-KEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEV 478

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+CS I GL K G V+ A R+Y +M++S    +AV Y ++I  F + G+ ++  ++++ M
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +GC  ++   N  +  + + G+  +  +++E ++ +    D  ++ +LI+GL K G+ 
Sbjct: 539 IHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFA 598

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            +  ++   ++E                   GC L+ +  N+ ++GF ++ K+  A  L 
Sbjct: 599 RETYELFYAMKE------------------QGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +EM  KG  PTVV+Y ++I+GL K++R  EAY   +E    G + +++ YS LI+G  + 
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +ID A  +  + +QKG TP+V  +N L+  L  A ++ +AL  + NMK     PN +TY
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           + L++GL +    +KA   W  + ++ L+P+ I+Y   + GL     +++A         
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 602 RGILPTTITWHILVRAV 618
            G +P + +++ ++  +
Sbjct: 821 NGGVPDSASYNAIIEGL 837



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 175/636 (27%), Positives = 300/636 (47%), Gaps = 54/636 (8%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L + +     L LF    +E GY  S HLF  ++R      +     R+       
Sbjct: 204 LIGALSSVQESDIMLTLFHQ-MQELGYEVSVHLFTTVIR------VFAREGRL------- 249

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
                 D ALS++     N +    + ++    + FG +AG      + + A +F + + 
Sbjct: 250 ------DAALSLLDEMKSNCLHADIV-LYNVCIDCFG-KAG------KVDMAWKFFHEIK 295

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC---YNILIDGFFKKG 184
             GL PD  +Y ++I  L K   L  A+ +F++M +     NV C   YN +I G+   G
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN---RNVPCAYAYNTMIMGYGSAG 352

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            +  A  + ER      + P+V+ YN ++  L K GR  E L  ++ MKK+     S TY
Sbjct: 353 KFDEAYSLLERQKARGCI-PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLS-TY 410

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              I  LCKAG VE A +V   M E+G+F + +T N MID  C+A K+ E   ++E M  
Sbjct: 411 NVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNH 470

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           K C  + V++  LI GL + G+VD+A  ++E + + +   ++  +  LI    K G    
Sbjct: 471 KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKED 530

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             +I  E+   G                  G      +L   +   G   +  + + L++
Sbjct: 531 GHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIH 590

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G ++A        LF  M  +GC     +YNT I+G CK  +  +AY  ++EM  KG +P
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            ++TY  +I+GL +  ++D A  L  +    G   +V +Y+ LI G    G++++A  + 
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIM 710

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             + ++   PN+ T+N L+D L K  + ++AL  + ++   +  P+ I+Y+I + GLC  
Sbjct: 711 EELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRV 770

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + + AF F  +   +G+ P TIT+  ++  +   G
Sbjct: 771 RKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 293/637 (45%), Gaps = 26/637 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L+  K+ + A++ F    R+   A  P  +  +L  +       +  +IL  + I 
Sbjct: 98  VIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIA 157

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
                    + +I +  K++   +  D+ Q M +         +    G L   ++ +  
Sbjct: 158 GFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIM 217

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
               + + E G +  V+ + TVI    + G L  AL++ DEM    +  ++V YN+ ID 
Sbjct: 218 LTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDC 277

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G    A + +   +    + P+ VTY  MI  LCK  R DE +E++++M++N    
Sbjct: 278 FGKAGKVDMAWKFFHE-IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVP 336

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
            ++ Y + I G   AG  + A  +       G     + YN ++    + G++ E    +
Sbjct: 337 CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF 396

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           E M +    N+ +YN+LI  L + G+V+ A  + + ++E     +  T  ++I+ LCK  
Sbjct: 397 EEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            L++A  I   +                   G +GR+ DA  L  +M       NA    
Sbjct: 457 KLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+  F +  + E+   +FKEM  +GCSP +   N  ++ + K    G+  +  +E+  +
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G+ PD+++YS+LI+GL ++       +L     ++G   D   YN  I G C +GKV  A
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            QL   MK +   P +VTY +++DGL K    D+A  ++       L  +++ Y+  + G
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                R+ +A+  + + + +G+ P   TW+ L+ A++
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 20/309 (6%)

Query: 316 LIRGLLENGK-VDEAISIWELLREKNCNAD-STTHGVLINGLCKNGYLNKAIQILNEVEE 373
           L+ G+L   K V++AIS +     K   A     +  L+  + KN   +   QIL E+  
Sbjct: 97  LVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSI 156

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G G                   +  TC  L+   I+++KL     L + M +    P  
Sbjct: 157 AGFGP------------------STKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAF 198

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +Y TLI  L  V+      +   +M E G++  +  ++ +I    +  ++D AL L  +
Sbjct: 199 SAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                   D+ +YN+ I     AGKV+ A + +  +K    +P+ VTY +++  L K   
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+A+EI+  + + R  P   +YN  + G  S  +  +A+  L     RG +P+ I ++ 
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 614 LVRAVMNNG 622
           ++  +   G
Sbjct: 379 ILTCLGKKG 387


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 283/598 (47%), Gaps = 80/598 (13%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +F S  +   Y      F+ ++      +    + ++L+ ++ +     E + + + +A 
Sbjct: 75  IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 134

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           GK  +P +A++ F RM     C                          K  V S+ +V+N
Sbjct: 135 GKAHLPGEAVNFFHRMANDLHC--------------------------KQTVKSFNSVLN 168

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
            +++ GD   A   +  +F                G   KG                   
Sbjct: 169 VIIQEGDFSYAFKFYLHVF----------------GANSKG-----------------FQ 195

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN++TYN++I  LCK G+ D  ++ +  M       D FTY + ++GLCK   V+ A  +
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM   G   + VT+N +ID   + G +    +L + M  KGC+ N V+YN LI GL  
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D+A+S+ E +    C  +  T+G +INGL K       + IL  +EE G+      
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ------ 369

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                       K N Y  +SL++G  +  K ENA+ L+KEM+ KGC P VV Y   I+G
Sbjct: 370 ------------KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 417

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+ E+  EA   ++EML KG+ P+  TYS L+ G  +      A+ +  + + +    +
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 477

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V   ++L++GLC +G++ +AL ++++M      P++V Y++++ GL   G  DK L+++ 
Sbjct: 478 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 537

Query: 563 HIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +   E + RPD+++YNI    LC    ++ A + LN  L  G  P ++T +I +  +
Sbjct: 538 EMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 218/440 (49%), Gaps = 24/440 (5%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG-AERVYR 265
            T+  +I        F    ++ DRMK+  R      +   I   C   ++ G A   + 
Sbjct: 90  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFI-LIFKACGKAHLPGEAVNFFH 148

Query: 266 EMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELW-EVMG--RKGCL-NVVSYNILIRGL 320
            M         V ++N++++   + G     F+ +  V G   KG   N+++YN++I+ L
Sbjct: 149 RMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKAL 208

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G++D A+  +  +  KNCN D  T+  L+NGLCK   +++A+ +L+E++  G     
Sbjct: 209 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 268

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G L+ AA LV+ M   GC  N  T N+L++G     KL+ A+ L ++
Sbjct: 269 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 328

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M    C P  V+Y T+INGL K  R  +    +  M E+G K +   YS LI+GL +  K
Sbjct: 329 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 388

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            + A++L  +  +KG  P+V +Y   I GLC   K ++A  +   M  +  +PN  TY++
Sbjct: 389 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           LM G FK GD  KA+ +W  ++ + +R +++  ++ L GLC   R+ +A       L  G
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 508

Query: 604 ILPTTITWHILVRAVMNNGA 623
           + P  + +  +++ + + G+
Sbjct: 509 LKPDVVAYSSMIKGLCDVGS 528



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 221/470 (47%), Gaps = 58/470 (12%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I+A  K    D+A+D F+ M  +  C   +         LC++R+ ++A   L+ +  +
Sbjct: 204 IIKALCKLGQIDRAVDTFREM-PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  ++  +I+ L K+GDL  A  + D MF +G   N V YN LI G   KG   +A
Sbjct: 263 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 322

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + E++V    V PN VTY  +INGL K  R ++ + +   M++  ++ + + Y S I 
Sbjct: 323 LSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GL K G  E A R+++EM E G   + V Y A IDG CR  K  E  ++ + M  KG L 
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 441

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +Y+ L++G  + G   +AI +W+ +  ++   +     VL+NGLC++G L +A+ + 
Sbjct: 442 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 501

Query: 369 NEVEEGGEGRLADAASL---------VNRMDKHGCKL-------------NAYTCNSLMN 406
             +   GEG   D  +          V  +DK G KL             +  T N L N
Sbjct: 502 THML--GEGLKPDVVAYSSMIKGLCDVGSVDK-GLKLFYEMQCQEPKSRPDVVTYNILFN 558

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNT---------------------LINGLCK 445
              +   L  AI L   M  +GC P  ++ N                      L+  L K
Sbjct: 559 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLK 618

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            ER   A   V+EML +   P+  T+S +I   C+ K+I   +  CC+ L
Sbjct: 619 RERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDECCRSL 668



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 21/319 (6%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELL---REKNCNADSTTHGVLINGLCKNGYLNKAI 365
            V S+N ++  +++ G    A   +  +     K    +  T+ ++I  LCK G +++A+
Sbjct: 159 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 218

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
               E                  M    C  + +T ++LMNG  +  +++ A+FL  EM 
Sbjct: 219 DTFRE------------------MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +GC P  V++N LI+ L K      A   V  M  KG  P+ +TY+ LI+GLC   K+D
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL L  + +     P+   Y  +I+GL    + ED + +  +M++R    N   Y++L+
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GLFK G  + A+ +W  + E+  +P+++ Y   + GLC   +  +A + L + L +G L
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 606 PTTITWHILVRAVMNNGAS 624
           P   T+  L++     G S
Sbjct: 441 PNAFTYSSLMKGFFKKGDS 459


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 273/545 (50%), Gaps = 34/545 (6%)

Query: 92  ALD-VFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK---GLKPDVYSY 138
           A+D V +RM E+ GC   +         LC + + ++A   L+ + +    G  PDV SY
Sbjct: 141 AMDIVLRRMTEL-GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVING  K GD   A + + EM +RG+  +VV YN +I    K     +A E+   +V 
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV- 258

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+ +TYN +++G C  G+  E +    +M+ +  E D  TY   +  LCK G   
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   +   ++ILI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
               + GKVD+A+ ++  +R++  N ++ T+G +I  LCK+G                  
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG------------------ 420

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R+ DA     +M   G        NSL++G    +K E A  L  EM  +G     + +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           ++I+  CK  R  E+    + M+  G KP++ITY+ LING C + K+D A+KL    +  
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P+   Y+ LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E++  I E   + ++ +YNI L GLC      DA +   +     +     T++I++ A
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 618 VMNNG 622
           ++  G
Sbjct: 661 LLKVG 665



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 261/512 (50%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PD+ +YG +I    ++G L    A    + ++G   + + +  L+ G         A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E    PNV +YN+++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  K G+ + A   Y EM++ GI  D VTYN++I   C+A  + +  E+   M + G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + + ++YN ++ G   +G+  EAI   + +R      D  T+ +L++ LCKNG   +A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +   L++ M ++G   + Y  + L+  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ +F +M ++G +P  V+Y  +I  LCK  R  +A  + ++M+++G  P  I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+GLC   K + A +L  + L +G   +   +N +I   C  G+V ++ +L+  M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN++TYNTL++G    G  D+A+++ + ++   L+P+ ++Y+  + G C  SRM
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     +    G+ P  IT++I+++ +   
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQT 594



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/581 (24%), Positives = 271/581 (46%), Gaps = 46/581 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKC--------------YCPEDVAL-SVIQAYGK 85
           +H +L R I P +V + S I  L + Q                  P+ +   S++  Y  
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M    G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 279 SGQPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  +   ++ILI  + K+G   +A  ++ ++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + PN VTY  +I  LCK GR ++ +  +++M        +  Y S IHGLC    
Sbjct: 398 -RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E AE +  EM++ GI ++ + +N++ID  C+ G++ E  +L+E+M R G   NV++YN 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA+ +   +       ++ T+  LING CK                  
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS---------------- 560

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 561 --RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK +   +A    + +     K +  T++++I+ L +  + D A  L   F 
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  P+   Y ++   +   G +E+  QL+ +M+   C  +    N ++  L + G+  
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +A    + I E+    +  + ++ +  L S  +  + + FL
Sbjct: 739 RAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 222/470 (47%), Gaps = 28/470 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYN-ILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYN 210
           A  VFDE+  RG   ++   N  L D    +     A   + R+    +  V P++ TY 
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVE 269
           ++I   C+ GR D        + K     D+  +   + GLC       A + V R M E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGK 325
            G   +  +YN ++ G C   + +E  EL  +M    G     +VVSY  +I G  + G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+A S +  + ++    D  T+  +I  LCK   ++KA+++LN                
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT--------------- 256

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M K+G   +  T NS+++G+  + + + AI   K+M   G  P VV+Y+ L++ LCK
Sbjct: 257 ---MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  PD  +
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           ++ILI      GKV+ A+ ++S M+++   PN VTY  ++  L K+G  + A+  +  ++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +E L P  I YN  + GLC+C++   A E + + L RGI   TI ++ ++
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 27/317 (8%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTT-----HGVLINGLCKNGYLNKAIQILNE 370
           L R L +  +   A ++    R     AD  T     +G+LI   C+ G L+     L  
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGC 429
           V                   K G +++A     L+ G     +  +A+  + + M+  GC
Sbjct: 113 VI------------------KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK---GWKPDMITYSLLINGLCQSKKIDM 486
            P V SYN L+ GLC   R  EA   +  M +    G  PD+++Y+ +ING  +    D 
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A     + L +G  PDV  YN +I  LC A  ++ A+++ + M K   +P+ +TYN+++ 
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G   +G   +A+     +  + + PD+++Y++ +  LC   R  +A +  +    RG+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 607 TTITWHILVRAVMNNGA 623
              T+  L++     GA
Sbjct: 335 EITTYGTLLQGYATKGA 351



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 131/249 (52%), Gaps = 8/249 (3%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC---SPTVVSYN 437
           DA  + + + + G   + Y  N  +    + S    A+  +  M+R G    +P + +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI   C+  R    ++ +  +++KG++ D I ++ L+ GLC  K+   A+ +  + + +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 498 -GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCVPNLVTYNTLMDGLFKTGD 553
            G  P+V  YNIL+ GLC   + ++AL+L   M   +     P++V+Y T+++G FK GD
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA   ++ +L+  + PD+++YN  +  LC    M  A E LN  +  G++P  +T++ 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 614 LVRAVMNNG 622
           ++    ++G
Sbjct: 272 ILHGYCSSG 280


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 277/570 (48%), Gaps = 46/570 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC----------RKRQFEKAKRFLNSLWE 128
           V+++Y +  + DKAL +   +++  G   G+L            KR    A+     + +
Sbjct: 140 VVKSYSRLCLIDKALSIVH-LSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ 198

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
             + P+V++Y  +I G   +G+L  AL  FD M ++G   NVV YN LIDG+ K      
Sbjct: 199 SQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDD 258

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             E+   + ++  + PN+++YNV+INGLC+ GR  E   +   M K     D  TY + I
Sbjct: 259 GFELLRSMALK-GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLI 317

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            G CK GN   A  ++ EM+  G+    +TY ++I   C+AG +    E  + M  +G C
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLC 377

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N  +Y  L+ G  + G ++EA  + + + +   +    T+  LING C           
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI---------- 427

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                    G++ DA +++  M + G   +  + +++++GF ++  ++ A+ + ++M  K
Sbjct: 428 --------AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  ++Y++LI G C+  R  EA     EML  G  PD  TY+ LIN  C    +  A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD- 546
           ++L  + ++KG  PDV  Y++LI+GL    +  +A +L   +     VP+ VTY+TL++ 
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599

Query: 547 --------------GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
                         G    G   +A +++  +LE+  +PD  +YN+ + G C    +  A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +    + +  G L  T+T   LV+ +   G
Sbjct: 660 YSLYKEMVKSGFLLHTVTVIALVKTLHKEG 689



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 239/501 (47%), Gaps = 45/501 (8%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D AL  F RM E  GC   ++         C+ R+ +     L S+  KGL+P++ SY  
Sbjct: 222 DVALRFFDRM-EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VINGL + G +     V  EM +RG   + V YN LI G+ K+G++ +A  +    ++  
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRH 339

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+V+TY  +I+ +CK G  +   E  D+M+      +  TY + + G  + G +  A
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
            RV +EM+++G     VTYNA+I+G C AGK+ +   + E M  KG   +VVSY+ ++ G
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
              +  VDEA+ +   +  K    D+ T+  LI G C+                  + R 
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCE------------------QRRT 501

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            +A  L + M + G   + +T  +L+N +     L+ AI L  EM  KG  P VV+Y+ L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL---------------LINGLCQSKKI 484
           INGL K  R  EA   + ++  +   P  +TY                 LI G C    +
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             A ++    L+K   PD T YN++IHG C  G +  A  LY  M K   + + VT   L
Sbjct: 622 TEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIAL 681

Query: 545 MDGLFKTGDCDKALEIWNHIL 565
           +  L K G  ++   +  ++L
Sbjct: 682 VKTLHKEGKVNELNSVIANVL 702



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 3/211 (1%)

Query: 415 ENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           E+A  +F+ +      C+ T   ++ ++    ++    +A S V      G+ P +++Y+
Sbjct: 114 EDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYN 173

Query: 473 LLINGLCQSKK-IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +++   +SK+ I  A  +  + LQ   +P+V  YNILI G C AG ++ AL+ +  M+K
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK 233

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           + C+PN+VTYNTL+DG  K    D   E+   +  + L P++ISYN+ + GLC   RM +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKE 293

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               L +   RG     +T++ L++     G
Sbjct: 294 ISFVLTEMNKRGYSLDEVTYNTLIKGYCKEG 324


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 258/509 (50%), Gaps = 20/509 (3%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LCR R  ++A     S+ +KGL PD+Y+Y  +ING         A  +  EM + G++
Sbjct: 258 GGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 317

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
              + YN LIDGF ++GD  +A  I + +V    +  N++ +N ++NG+CK G+ ++ LE
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMV-ACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   M +   E DS TY   I G C+  N+  A  +  EM +  +    +TY+ +I+G C
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G ++    +   M   G   N V Y  L+    + G+V+E+  I E +RE+    D  
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  LI G CK                    R+ +A + +  M +   + NA+T  + ++
Sbjct: 497 CYNSLIIGFCK------------------AKRMEEARTYLMEMLERRLRPNAHTYGAFID 538

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G+ +A ++E A   F EM   G  P V  Y  LI G CK     EA+S  + +L +    
Sbjct: 539 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ 598

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ TYS+LI+GL ++ K+  A  +  +  +KG  P+   YN LI G C  G V+ A QL 
Sbjct: 599 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 658

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M  +   P++VTYN L+DGL K G+ ++A  +++ I    L P+ ++Y   + G C  
Sbjct: 659 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 718

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
              + AF+ L + L RG+ P    +++++
Sbjct: 719 KNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/541 (29%), Positives = 272/541 (50%), Gaps = 28/541 (5%)

Query: 85  KNSMPDKAL--DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           K SM DK L  D++     I G      C +++  +AK  L  + + GLKP+  +Y  +I
Sbjct: 273 KRSMVDKGLVPDLYTYDILING-----FCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G ++ GD+  A  + DEM   G+E N++ +N L++G  K G   +A EI + + ME  V
Sbjct: 328 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM-MEKGV 386

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+  TY+++I G C+        E+ D MKK +      TY   I+GLC+ GN++G   
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           + REMV +G+  +AV Y  ++    + G+++E   + E M  +G L +V  YN LI G  
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           +  +++EA +    + E+    ++ T+G  I+G  K G +  A +  NE           
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE----------- 555

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  M   G   N     +L+ G  +   +  A  +F+ +  +     V +Y+ LI+
Sbjct: 556 -------MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 608

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL +  +  EA+    E+ EKG  P+  TY+ LI+G C+   +D A +L  +   KG  P
Sbjct: 609 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D+  YNILI GLC AG++E A  L+ +++ R   PN VTY  ++DG  K+ +   A ++ 
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 728

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L   + PD   YN+ L   C   +   A +   + L +G   +T++++ L+     +
Sbjct: 729 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKS 787

Query: 622 G 622
           G
Sbjct: 788 G 788



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/614 (27%), Positives = 294/614 (47%), Gaps = 41/614 (6%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY-----CPEDVALSVI-QAYGKNS 87
           Y  +  L   I+R    P  V        L  I KCY      P  V   ++  +Y K  
Sbjct: 108 YGPASDLIKCIIRNSDSPLAV--------LGSIVKCYRSCNGSPNSVIFDMLMDSYRKMG 159

Query: 88  MPDKALDVF------QRMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
              +A++VF      +    +  C +  G L +  + E   +  + +    + PDVY+Y 
Sbjct: 160 FLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYT 219

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I+   K G++  A  V  EM E+G   N+V YN++I G  +      A E+ +R +++
Sbjct: 220 NMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL-KRSMVD 278

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + P++ TY+++ING C   R  E   M   M     + +  TY + I G  + G++E 
Sbjct: 279 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 338

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A R+  EMV  GI  + + +N +++G C+AGK+++  E+ + M  KG   +  +Y++LI 
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
           G      +  A  + + ++++       T+ V+INGLC+ G L     IL E+   G   
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 458

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EGR+ ++  ++ RM + G   + +  NSL+ GF +A ++E A    
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 518

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM  +   P   +Y   I+G  K      A  +  EML  G  P++  Y+ LI G C+ 
Sbjct: 519 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
             +  A  +    L +    DV  Y++LIHGL   GK+ +A  ++S ++++  +PN  TY
Sbjct: 579 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTY 638

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N+L+ G  K G+ DKA ++   +  + + PDI++YNI + GLC    +  A    +D   
Sbjct: 639 NSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG 698

Query: 602 RGILPTTITWHILV 615
           RG+ P  +T+  +V
Sbjct: 699 RGLTPNCVTYAAMV 712



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 164/583 (28%), Positives = 281/583 (48%), Gaps = 68/583 (11%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           +KAL++ Q M E  G E             CR +   +A   L+ + ++ L P V +Y  
Sbjct: 372 EKALEIMQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +INGL + G+L G  A+  EM   G++ N V Y  L+    K+G    ++ I ER+  E 
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM-REQ 489

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+V  YN +I G CK  R +E       M +     ++ TY +FI G  KAG +E A
Sbjct: 490 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRG 319
           +R + EM+  G+  +   Y A+I+G C+ G + E F ++  ++ R+   +V +Y++LI G
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L  NGK+ EA  I+  L+EK    ++ T+  LI+G CK G ++KA Q+L E+   G    
Sbjct: 610 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA----------- 411
                         G +  A +L + ++  G   N  T  ++++G+ ++           
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729

Query: 412 ------------------------SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
                                    K E A+ LF+EM  KG + TV S+NTLI G CK  
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSG 788

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  EA   ++EM+EK + P+ +TY+ LI+  C++  +  A +L  +  ++   P    Y 
Sbjct: 789 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 848

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L+HG  + G + +   L+  M  +   P+ +TY  ++D   + G+  +A ++ + IL +
Sbjct: 849 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 908

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI---LPT 607
            +   + +Y+  ++ LC      +  + LN+    G    LPT
Sbjct: 909 GMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 270/559 (48%), Gaps = 29/559 (5%)

Query: 75   VALSVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGIL--CRKRQFEKAKRFLNSL 126
            V  +++ A+ K    +++  + +RM E      +F   + I+  C+ ++ E+A+ +L  +
Sbjct: 462  VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521

Query: 127  WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
             E+ L+P+ ++YG  I+G  K+G++  A   F+EM   GV  NV  Y  LI+G  K+G+ 
Sbjct: 522  LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581

Query: 187  MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
              A  ++ R ++   V  +V TY+V+I+GL + G+  E   ++  +++     ++FTY S
Sbjct: 582  TEAFSVF-RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640

Query: 247  FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRK 305
             I G CK GNV+ A ++  EM   GI  D VTYN +IDG C+AG+I+    L++ + GR 
Sbjct: 641  LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700

Query: 306  GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
               N V+Y  ++ G  ++     A  + E +  +    D+  + V++N  CK     KA+
Sbjct: 701  LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 760

Query: 366  QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
             +  E+ E G    A   S                 N+L+ G+ ++ KL+ A  L +EM 
Sbjct: 761  DLFQEMLEKG---FASTVSF----------------NTLIEGYCKSGKLQEANHLLEEMI 801

Query: 426  RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             K   P  V+Y +LI+  CK    GEA     EM E+   P   TY+ L++G      + 
Sbjct: 802  EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861

Query: 486  MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
                L  + + KG  PD   Y ++I   C  G V +A +L   +  +    ++  Y+ L+
Sbjct: 862  EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921

Query: 546  DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
              L K  +  + L++ N I E   R  + + ++  +G      M +A E L   +  G +
Sbjct: 922  QALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWV 981

Query: 606  PTTITWHILVRAVMNNGAS 624
              T +   LV    N   S
Sbjct: 982  SNTTSLGDLVDGNQNGANS 1000



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 221/458 (48%), Gaps = 20/458 (4%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V +++L+D + K G  + A  ++          P++++ N ++  L K  + +   ++
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLG-PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D M  ++   D +TY + I   CK GNV+ A+RV  EM E G   + VTYN +I G CR
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A  + E  EL   M  KG + ++ +Y+ILI G     +  EA  +   + +     +  T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G  + G + +A +I +E                  M   G + N    N+L+NG
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDE------------------MVACGIEANLIIWNTLLNG 364

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A K+E A+ + +EM  KG  P   +Y+ LI G C+ +    A+  + EM ++   P 
Sbjct: 365 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 424

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TYS++INGLC+   +     +  + +  G  P+  +Y  L+      G+VE++  +  
Sbjct: 425 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 484

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+++  +P++  YN+L+ G  K    ++A      +LE RLRP+  +Y   + G     
Sbjct: 485 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            M  A  + N+ L  G+LP    +  L+      G  T
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 182/675 (26%), Positives = 319/675 (47%), Gaps = 135/675 (20%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
           P+D  ++++ +AY ++     A D  + M E+ G +  ++         CR  Q E A++
Sbjct: 162 PDDFTVAIMAKAYCRDGRVAHAADFLKEMEEM-GLDVNLVAYHAVMDGYCRIGQTEVARK 220

Query: 122 FLNSLWEKGLKPDVYSY------------------------------------GTVINGL 145
            L+SL  KGL P+V +Y                                    G +ING 
Sbjct: 221 LLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGY 280

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            + G +  A  V DEM + GV+ N+  YN +I+G+ K G   R  E+ E+L ++ + Y  
Sbjct: 281 CQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLG---RMGEV-EKL-LQANEYRG 335

Query: 206 V----VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V     +YN +++G C+ G   +  E  D M +N     + TY + ++G C  G ++ A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
           +++  M++ G+  + ++ + ++DGF +AGK ++   LW E + R    NVV+ N +I GL
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +N ++ EA  ++  ++E +C  DS T+  LI+G CK G L +A QI  E+E  G     
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 376 -----------------------------------------------EGRLADAASLVNR 388
                                                          EG L DA  L   
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR----KGCSPTVVS--------- 435
           M + G K N + C+ L++ F +  K++ A  + ++++     + CS + ++         
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635

Query: 436 -------------YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                        +N +I GLCK+ R  +A +  +++  KG+ PD  TYS LI+G   S 
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            ID+A  L  + L    TP++  YN LI+GLC +  V  A+ L++ ++ +   PN +TYN
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+DG  K G+  +A ++   +++E ++P + +Y I + GLC+   M +A + L+  +  
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIEN 815

Query: 603 GILPTTITWHILVRA 617
            + P  IT+  L++ 
Sbjct: 816 NVDPNFITYWTLIQG 830



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 242/512 (47%), Gaps = 10/512 (1%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CRK    KA    + +   G      +Y T++NG    G +  AL ++  M +RGV  N 
Sbjct: 351 CRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNE 410

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  + L+DGFFK G   +A  +W+   +   +  NVVT N +INGLCK  R  E  E++ 
Sbjct: 411 ISCSTLLDGFFKAGKTEQALNLWKE-TLARGLARNVVTINTVINGLCKNRRMTEAEELFH 469

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           RMK+     DS TY + I G CK G++  A ++  EM   G       +N+ I G   A 
Sbjct: 470 RMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAK 529

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  +  ++   M  KG   N V+Y  LI G  + G + +A  ++  + EK    +     
Sbjct: 530 QSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICS 589

Query: 350 VLINGLCKNGYLNKAIQILNEVEE--------GGEGRLADAASLVNRMDKHGCKLNAYTC 401
           VL++   + G +++A  +L ++ +             +   A ++  +     +      
Sbjct: 590 VLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMW 649

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G  +  ++ +A  LF+++  KG  P   +Y++LI+G         A+    EML 
Sbjct: 650 NIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLS 709

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
               P+++TY+ LI GLC+S  +  A+ L  +   KG +P+   YN LI G C  G   +
Sbjct: 710 ARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTE 769

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A +L   M K    P + TY  L+ GL   G  ++A+++ + ++E  + P+ I+Y   ++
Sbjct: 770 AFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQ 829

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
           G   C  M    +  N+    G+LP   T H+
Sbjct: 830 GYARCGNMKAITKLYNEMHICGLLPANWTGHV 861



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 201/394 (51%), Gaps = 18/394 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +  ++++++      G+  + L ++D M K    +   +    ++ L +AG++  A  V+
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           ++M  +G   D  T   M   +CR G++    +  + M   G  +N+V+Y+ ++ G    
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ + A  +   L+ K  + +  T+ +L+ G CK G + +A +++ E++E  +  + + A
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                              +L+NG+ Q  ++E+A  +  EM   G    +  YNT+ING 
Sbjct: 273 Y-----------------GALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGY 315

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+ R GE    ++    +G   D  +Y+ L++G C+   +  A + C   ++ GFT   
Sbjct: 316 CKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTT 375

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN L++G CS G ++DAL+L+  M KR  VPN ++ +TL+DG FK G  ++AL +W  
Sbjct: 376 LTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKE 435

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            L   L  ++++ N  + GLC   RM++A E  +
Sbjct: 436 TLARGLARNVVTINTVINGLCKNRRMTEAEELFH 469



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 230/481 (47%), Gaps = 21/481 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           S+  ++     +G L  AL VFDEM + G    +   N L++   + GD   A  +++++
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
               ++ P+  T  +M    C+ GR     +    M++   + +   Y + + G C+ G 
Sbjct: 156 RCAGTL-PDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQ 214

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYN 314
            E A ++   +   G+  + VTY  ++ G+C+ G+++E  ++ + +    K  ++ V+Y 
Sbjct: 215 TEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYG 274

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI G  + G++++A  + + + +     +   +  +ING CK                 
Sbjct: 275 ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCK----------------- 317

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR+ +   L+   +  G  L+ Y+ N+L++G+ +   +  A      M R G + T +
Sbjct: 318 -LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTL 376

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNTL+NG C      +A      ML++G  P+ I+ S L++G  ++ K + AL L  + 
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L +G   +V   N +I+GLC   ++ +A +L+  MK+ +C  + +TY TL+DG  K GD 
Sbjct: 437 LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A +I   +      P +  +N  + GL    +     +   +   +G+ P T+T+  L
Sbjct: 497 GRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGAL 556

Query: 615 V 615
           +
Sbjct: 557 I 557



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 77/166 (46%)

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           K  S +  S++ L+       +  +A     EM + G +  + + + L+N L Q+  I  
Sbjct: 88  KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+ +  Q    G  PD     I+    C  G+V  A      M++     NLV Y+ +MD
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           G  + G  + A ++ + +  + L P++++Y + +KG C   RM +A
Sbjct: 208 GYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEA 253


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 267/519 (51%), Gaps = 22/519 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVC 172
           R  + A    N +  +   P +  +  +++ +VK G   GA+    +  E  G+  ++  
Sbjct: 73  RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
            +ILID F        A  ++ +++ +  + P+ VT+N +INGLCK G+F + +E +D  
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMI-KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           + +  +   +TY + I+GLCK G    A  ++++M E+G   + VTYN +ID  C+   +
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251

Query: 293 KECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +++  M  ++   ++ +YN LI+GL    +  EA ++   +   N   +  T  VL
Sbjct: 252 NEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVL 311

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ++ +CK G +++A  +   + E G                    + +A  L + M   GC
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K +A++ N L+ G+ +A +++ A  LF EM  +G +P  V+YNTLI+GLC++ R  EA  
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             K M   G  PD+ TYS+L++G C+   +  A +L          PD+ MYNILI  +C
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMC 491

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G ++DA +L+S +  +  +PN+  Y T+++ L K G  D+ALE + ++  +   PD  
Sbjct: 492 KFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEF 551

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPT--TITW 611
           SYN+ ++G       S A + + +   RG +    T TW
Sbjct: 552 SYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 231/470 (49%), Gaps = 19/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           ALA F+ M  R     ++ +  L+    K G Y  A     + +    + P++ T +++I
Sbjct: 78  ALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILI 137

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +      R D    ++ +M K   + D+ T+ + I+GLCK G    A   + +   SG  
Sbjct: 138 DCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ 197

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
               TY  +I+G C+ G+      L++ M   GC  NVV+YNILI  L ++  V+EA+ I
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  ++ K  + D  T+  LI GLC                     R  +A++L+N M   
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFR------------------RWKEASALLNEMTSL 299

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N +T N L++   +  K+  A  +FK M+  G  P VV+Y++L+ G        EA
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M+ KG KPD  +Y++LI G C++K+ID A +L  + + +G TPD   YN LIHG
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G++ +A  L+ NM     +P+L TY+ L+DG  K G   KA  ++  +    L+PD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  YNI +  +C    + DA +  ++   +G+LP    +  ++  +   G
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 234/492 (47%), Gaps = 33/492 (6%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEI--------FG 104
           V+ +S+ +EL  +     P+   LS+ I  +      D A  VF +M ++        F 
Sbjct: 114 VISLSKQMELAGLS----PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFN 169

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+  +F +A  F +     G +P VY+Y T+INGL K G+   A  +F +M E 
Sbjct: 170 TLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + NVV YNILID   K      A +I+  +  +  + P++ TYN +I GLC   R+ E
Sbjct: 230 GCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK-RISPDIFTYNSLIQGLCNFRRWKE 288

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              + + M       + FT+   +  +CK G V  A+ V++ M E G+  D VTY++++ 
Sbjct: 289 ASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMY 348

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+    +I E  +L++ M  KGC  +  SYNILI+G  +  ++DEA  ++  +  +    
Sbjct: 349 GYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTP 408

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D+  +  LI+GLC+                   GRL +A  L   M  +G   + +T + 
Sbjct: 409 DNVNYNTLIHGLCQ------------------LGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF +   L  A  LF+ M      P +  YN LI+ +CK     +A     E+  +G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P++  Y+ +IN LC+   +D AL+        G  PD   YN++I G         A 
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAA 570

Query: 524 QLYSNMKKRNCV 535
           QL   M+ R  V
Sbjct: 571 QLIGEMRDRGFV 582



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 1/145 (0%)

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA-LQLYSNMKKRNCVPNLVT 540
           + ID AL      L +   P +  +  L+  +   G+   A + L   M+     P++ T
Sbjct: 73  RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
            + L+D        D A  +++ +++  L+PD +++N  + GLC   + + A EF +D  
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 601 CRGILPTTITWHILVRAVMNNGAST 625
             G  PT  T+  ++  +   G +T
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETT 217


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 272/545 (49%), Gaps = 34/545 (6%)

Query: 92  ALD-VFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK---GLKPDVYSY 138
           A+D V +RM E+ GC   +         LC + + ++A   L+ + +    G  PDV SY
Sbjct: 141 AMDIVLRRMTEL-GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVING  K GD   A + + EM +RG+  +VV YN +I    K     +A E+   +V 
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV- 258

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+ +TYN +++G C  G+  E +    +M+ +  E D  TY   +  LCK G   
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A +++  M + G+  +  TY  ++ G+   G + E   L ++M R G   +   ++ILI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
                 GKVD+A+ ++  +R++  N ++ T+G +I  LCK+G                  
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG------------------ 420

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R+ DA     +M   G        NSL++G    +K E A  L  EM  +G     + +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           ++I+  CK  R  E+    + M+  G KP++ITY+ LING C + K+D A+KL    +  
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P+   Y+ LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T     A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E++  I E   + ++ +YNI L GLC      DA +   +     +     T++I++ A
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 618 VMNNG 622
           ++  G
Sbjct: 661 LLKVG 665



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 260/512 (50%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PD+ +YG +I    ++G L    A    + ++G   + + +  L+ G         A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E    PNV +YN+++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  K G+ + A   Y EM++ GI  D VTYN++I   C+A  + +  E+   M + G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + + ++YN ++ G   +G+  EAI   + +R      D  T+ +L++ LCKNG   +A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +   L++ M ++G   + Y  + L+  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A+ +F +M ++G +P  V+Y  +I  LCK  R  +A  + ++M+++G  P  I
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+GLC   K + A +L  + L +G   +   +N +I   C  G+V ++ +L+  M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN++TYNTL++G    G  D+A+++ + ++   L+P+ ++Y+  + G C  SRM
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     +    G+ P  IT++I+++ +   
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQT 594



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 270/581 (46%), Gaps = 46/581 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKC--------------YCPEDVAL-SVIQAYGK 85
           +H +L R I P +V + S I  L + Q                  P+ +   S++  Y  
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M    G E  +         LC+  +  +A++  +S+ ++GLKP++ 
Sbjct: 279 SGQPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YGT++ G    G L+    + D M   G+  +   ++ILI  +  +G   +A  ++ ++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + PN VTY  +I  LCK GR ++ +  +++M        +  Y S IHGLC    
Sbjct: 398 -RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E AE +  EM++ GI ++ + +N++ID  C+ G++ E  +L+E+M R G   NV++YN 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA+ +   +       ++ T+  LING CK                  
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS---------------- 560

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  ++  G    + +
Sbjct: 561 --RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK +   +A    + +     K +  T++++I+ L +  + D A  L   F 
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  P+   Y ++   +   G +E+  QL+ +M+   C  +    N ++  L + G+  
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +A    + I E+    +  + ++ +  L S  +  + + FL
Sbjct: 739 RAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 223/470 (47%), Gaps = 28/470 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYN-ILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYN 210
           A  VFDE+  RG   ++   N  L D    +     A   + R+    +  V P++ TY 
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVE 269
           ++I   C+ GR D        + K     D+  +   + GLC       A + V R M E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGK 325
            G   +  +YN ++ G C   + +E  EL  +M    G     +VVSY  +I G  + G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            D+A S +  + ++    D  T+  +I  LCK   ++KA+++LN                
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT--------------- 256

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M K+G   +  T NS+++G+  + + + AI   K+M   G  P VV+Y+ L++ LCK
Sbjct: 257 ---MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA      M ++G KP++ TY  L+ G      +     L    ++ G  PD  +
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           ++ILI    + GKV+ A+ ++S M+++   PN VTY  ++  L K+G  + A+  +  ++
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +E L P  I YN  + GLC+C++   A E + + L RGI   TI ++ ++
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 27/317 (8%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTT-----HGVLINGLCKNGYLNKAIQILNE 370
           L R L +  +   A ++    R     AD  T     +G+LI   C+ G L+     L  
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-FLFKEMSRKGC 429
           V                   K G +++A     L+ G     +  +A+  + + M+  GC
Sbjct: 113 VI------------------KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK---GWKPDMITYSLLINGLCQSKKIDM 486
            P V SYN L+ GLC   R  EA   +  M +    G  PD+++Y+ +ING  +    D 
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A     + L +G  PDV  YN +I  LC A  ++ A+++ + M K   +P+ +TYN+++ 
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G   +G   +A+     +  + + PD+++Y++ +  LC   R  +A +  +    RG+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 607 TTITWHILVRAVMNNGA 623
              T+  L++     GA
Sbjct: 335 EITTYGTLLQGYATKGA 351



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 131/249 (52%), Gaps = 8/249 (3%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC---SPTVVSYN 437
           DA  + + + + G   + Y  N  +    + S    A+  +  M+R G    +P + +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI   C+  R    ++ +  +++KG++ D I ++ L+ GLC  K+   A+ +  + + +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 498 -GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCVPNLVTYNTLMDGLFKTGD 553
            G  P+V  YNIL+ GLC   + ++AL+L   M   +     P++V+Y T+++G FK GD
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA   ++ +L+  + PD+++YN  +  LC    M  A E LN  +  G++P  +T++ 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 614 LVRAVMNNG 622
           ++    ++G
Sbjct: 272 ILHGYCSSG 280


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/641 (27%), Positives = 314/641 (48%), Gaps = 52/641 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +    ++N+L+  KN  + L  F   +R   + H    F  +L RL+  +L      +  
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHV-R 134

Query: 63  LIEIQKCYCPEDVA-----LSVIQA-----------------YGKNSMPDKALDVFQRMN 100
           ++ I+ C    +V      LS I +                  GK  M D A D++ +M 
Sbjct: 135 ILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML 194

Query: 101 E--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     F     ILC+K + ++AK  ++ ++     P+ ++Y ++I G  ++ +L 
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLD 254

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A A+FD M + G + N V Y+ LI+G   +G    A ++ E +V +  + P V TY + 
Sbjct: 255 LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV-QKGIEPTVYTYTIP 313

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +  LC  G   E +E+  +MKK     +  T+ + I GL + G  E A  +Y +M+  G+
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
               VTYNA+I+  C  G+ +  F +++ M   G L +  +YN +I+     G + +A+ 
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           I++ + +   + +  T+  LI G CK G LN A+++L  ++  G                
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             G+L  A SL   M +HG   N  T  ++++G+   +K+++A+ LF +M   G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN +I+G  K     EA +F  +M+++G  P++ITY+  I+GLC++ +  +A K+  + 
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDA--LQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            ++ + P++  Y+ LI+GLC  G+ EDA    L + +    C PN+ TY TL+ GL   G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
            C +A ++   + ++ L+P    Y   L G C   ++  A 
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 223/462 (48%), Gaps = 23/462 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  +FE A    + +   GL P   +Y  +IN L   G    A  +F  M   G   +
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I  F   GD  +A  I+++++   S  PNV+TYN +I G CK G  +  + + 
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS-PNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK N  + D++TY   I G  + G +E A  ++  M+E GI  + VTY A+IDG+   
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ +   L+  M   G L +  +YN++I G  +   + EA +    + ++    +  T+
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
              I+GLC+NG    A +I +E                  M+K     N YT +SL+ G 
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHE------------------MEKRNYFPNLYTYSSLIYGL 632

Query: 409 IQASKLENAIF--LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            Q  + E+A    L   ++  GC P V +Y TL+ GLC   R  EA   V  M +KG +P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
               Y  L+ G C++ K++ AL +       GF   ++ Y  LI  LC    +E+A  ++
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
             M +++   + V +  L+DGL K G+ D  L++  H++E R
Sbjct: 753 QTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLL-HVMESR 793



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 205/446 (45%), Gaps = 56/446 (12%)

Query: 235 NEREKDSFTYCSFIHGLCKAGN---VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           N +    +T CSF   L + G    V+ A  +Y +M+ SGI    +T+N MI+  C+ G+
Sbjct: 158 NSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR 217

Query: 292 IKEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++E    +  +       N  +Y  LI G   N  +D A ++++ + +  C+ +S T+  
Sbjct: 218 VQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LINGLC  G L +A+ +L E+ + G                  G  ++A  L+ +M K G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T  +L++G  +  K E AI L+ +M   G  PT V+YN LIN LC   RF  A+
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 454 SFVK-----------------------------------EMLEKGWKPDMITYSLLINGL 478
           +  K                                   +ML+ G  P++ITY+ LI G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+   ++ A++L       G  PD   Y  LI G    GK+E A  L+  M +    PN 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY  ++DG F     D AL ++  ++E    P   +YN+ + G    + +S+A  F   
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 599 ALCRGILPTTITWHILVRAVMNNGAS 624
            + +G+LP  IT+   +  +  NG +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRT 603



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 222/481 (46%), Gaps = 42/481 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE--- 73
           N  T  AL    +R+  +  +  L+H +L   + P  V + + I +L       C E   
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL-------CVEGRF 393

Query: 74  DVALSVIQ-AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           + A ++ +      S+P       Q  NEI  C     C     +KA    + + + G  
Sbjct: 394 ETAFTIFKWMLSHGSLPST-----QTYNEIIKC----FCLMGDIQKAMVIFDKMLKAGSS 444

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+V +Y T+I G  K G+L  A+ + + M   G++ +   Y  LI GF + G    A  +
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  + ME  + PN VTY  +I+G     + D+ L ++ +M ++     S TY   I G  
Sbjct: 505 FYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K  ++  AE    +MV+ G+  + +TY + IDG CR G+    F+++  M ++    N+ 
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 312 SYNILIRGLLENGKVDEA--ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +Y+ LI GL + G+ ++A   ++   L    C  +  T+  L+ GLC             
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC------------- 670

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                GEGR  +A  LV  M K G + +     +L+ G  +  K+E+A+ +F  M   G 
Sbjct: 671 -----GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              +  Y  LI  LCK     EA    + MLEK W  D + +++L++GL +  + D+ LK
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLK 785

Query: 490 L 490
           L
Sbjct: 786 L 786



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 161/359 (44%), Gaps = 21/359 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCR-AGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLEN 323
           +V   +F  A     ++   CR  G++K   +    +  K      + S+  L+  L + 
Sbjct: 121 LVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKF 180

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
             VD A  ++  +          T   +IN LCK                  +GR+ +A 
Sbjct: 181 DMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK------------------KGRVQEAK 222

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +++ + ++    NA+T  SL+ G  +   L+ A  +F  M + GC P  V+Y+TLINGL
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C   R  EA   ++EM++KG +P + TY++ +  LC +     A++L  +  ++G  P++
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             +  LI GL   GK E A+ LY  M     VP  VTYN L++ L   G  + A  I+  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +L     P   +YN  +K  C    +  A    +  L  G  P  IT++ L+      G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +V+R  +  S +    + G+   + +++ L+  L +   +D+A  +  + L  G  P + 
Sbjct: 146 EVKRVTQFLSEINSKYDFGYT--LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            +N +I+ LC  G+V++A  + S++ + +  PN  TY +L+ G  +  + D A  +++ +
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +++   P+ ++Y+  + GLCS  R+ +A + L + + +GI PT  T+ I + ++ + G S
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 625 T 625
           +
Sbjct: 324 S 324


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/491 (30%), Positives = 256/491 (52%), Gaps = 30/491 (6%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG 130
           I  + + S    AL V  +M ++ G E  I+         C  ++   A   ++ + E G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            KPD +++ T+I+GL        A+A+ D+M +RG + ++V Y  +++G  K+GD   A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + +++  +  +  +VV YN +I+GLCK    D+ L ++  M       D FTY S I  
Sbjct: 244 SLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           LC  G    A R+  +M+E  I  + VT++A+ID F + GK+ E  +L++ M ++    +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           + +Y+ LI G   + ++DEA  ++EL+  K+C  +  T+  LI G CK            
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA----------K 412

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
            VEEG E        L   M + G   N  T  +L++GF QA   +NA  +FK+M   G 
Sbjct: 413 RVEEGME--------LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P +++YN L++GLCK  +  +A    + +     +PD+ TY+++I G+C++ K++   +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L C    KG +P+V  YN +I G C  G  E+A  L   MK+   +PN  TYNTL+    
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584

Query: 550 KTGDCDKALEI 560
           + GD + + E+
Sbjct: 585 RDGDREASAEL 595



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/626 (26%), Positives = 302/626 (48%), Gaps = 51/626 (8%)

Query: 3   ISAKRLLNL--LKAEKNPHTALALFD---SATREPGYAHSPHLFHHILRRLIDPKLVVHV 57
           ++AKRL     L+   NP T  + F+   S   E  +A +   +  ILR           
Sbjct: 7   LTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR----------- 55

Query: 58  SRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE 117
           +R+ ++I++       D A+ +     K S P  ++  F ++          + +  +FE
Sbjct: 56  NRLSDIIKV-------DDAVDLFGDMVK-SRPFPSIVEFNKL-------LSAVAKMNKFE 100

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
                   +   G+  D+Y+Y   IN   +   L  ALAV  +M + G E ++V  + L+
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           +G+        A  + +++V E    P+  T+  +I+GL    +  E + + D+M +   
Sbjct: 161 NGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D  TY + ++GLCK G+++ A  + ++M +  I  D V YN +IDG C+   + +   
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M  KG   +V +Y+ LI  L   G+  +A  +   + E+  N +  T   LI+   
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                  EG+L +A  L + M K     + +T +SL+NGF    +L+ 
Sbjct: 340 K------------------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +F+ M  K C P VV+Y+TLI G CK +R  E     +EM ++G   + +TY+ LI+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G  Q++  D A  +  Q +  G  P++  YNIL+ GLC  GK+  A+ ++  +++    P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++ TYN +++G+ K G  +   E++ ++  + + P++I+YN  + G C      +A   L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
                 G LP + T++ L+RA + +G
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDG 587



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 252/493 (51%), Gaps = 22/493 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       +++ ++M   G+  ++  Y+I I+ F ++     A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT + ++NG C   R  + + + D+M +   + D+FT+ + IHGL 
Sbjct: 141 LAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NV 310
                  A  +  +MV+ G   D VTY  +++G C+ G I     L + M  KG +  +V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADV 258

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V YN +I GL +   +D+A++++  +  K    D  T+  LI+ LC              
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN------------- 305

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR +DA+ L++ M +     N  T ++L++ F++  KL  A  L+ EM ++   
Sbjct: 306 -----YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P + +Y++LING C  +R  EA    + M+ K   P+++TYS LI G C++K+++  ++L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  Q+G   +   Y  LIHG   A   ++A  ++  M      PN++TYN L+DGL K
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G   KA+ ++ ++    + PDI +YNI ++G+C   ++ D +E   +   +G+ P  I 
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 611 WHILVRAVMNNGA 623
           ++ ++      G+
Sbjct: 541 YNTMISGFCRKGS 553



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 218/431 (50%), Gaps = 53/431 (12%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   ++ + ++G +PD+ +YGTV+NGL K GD+  AL++  +M +  +E +VV YN +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 178 DGFFK----------------KG----------------DYMRAKEIWERL--VMETSVY 203
           DG  K                KG                +Y R  +    L  ++E  + 
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNVVT++ +I+   K G+  E  +++D M K   + D FTY S I+G C    ++ A+ +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           +  M+    F + VTY+ +I GFC+A +++E  EL+  M ++G + N V+Y  LI G  +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
               D A  +++ +     + +  T+ +L++GLCKNG L KA+ +   ++          
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ---------- 495

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                   +   + + YT N ++ G  +A K+E+   LF  +S KG SP V++YNT+I+G
Sbjct: 496 --------RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+     EA S +K+M E G  P+  TY+ LI    +    + + +L  +    GF  D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607

Query: 503 VTMYNILIHGL 513
            +   ++ + L
Sbjct: 608 ASTIGLVTNML 618


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/517 (31%), Positives = 258/517 (49%), Gaps = 36/517 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  Q  +A    + +   GL P+  +  T++ GL + G +  AL +F EM        
Sbjct: 42  FCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPT 101

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLC----KCGRFD 223
              +NIL+ GFF  G   R ++    L  + ++S      TYN+++ GLC       R +
Sbjct: 102 SASHNILLRGFFMAG---RVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLE 158

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           + +E +  MK +  E D  +Y   +  L  +G +  A  ++  M  S    D +TYN ++
Sbjct: 159 QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLM 215

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG+C+ G+  E   L + + + G   NV +Y+I+I    +  KV+EA  ++  + E NC 
Sbjct: 216 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV 275

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            ++ T   LI G CK G L  AI++  E                  M+K GCK    T N
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAE------------------MEKIGCKATIVTYN 317

Query: 403 SLMNGFIQA-SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           +L++   +    +  A+ LF ++   G +PT+V+YN+LI G C   R  EA  +  EM E
Sbjct: 318 TLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-E 376

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
               P++ITYS+LI+GLC+ +++  A K        G+TP V  Y  LI+G C  G+++ 
Sbjct: 377 GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL  +  MK   C PN V +NTL+DGL K    +  L +  H+  E  +PD+I+YN  + 
Sbjct: 437 ALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           GLCS +R+ DA    +   C    P   T++ L+R +
Sbjct: 497 GLCSANRVEDAQRLFDGMACA---PNVTTFNFLIRGL 530



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 223/410 (54%), Gaps = 28/410 (6%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+A  F   +   G++PD+ SY  +++ L  SG +  A A+F  M       +++ YN
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYN 212

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           +L+DG+ K G    A+ + +  +++    PNV TY+++IN  CK  + +E  E++ +M +
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKE-ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA-GKIK 293
           +    ++ T+ + I G CKAG +E A +++ EM + G     VTYN +ID  C+  G + 
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
              +L+  +   G    +V+YN LI+G  +  ++ EA+  ++ + E  C  +  T+ +LI
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLCK                    R+ +AA  +  M  HG      T   L+NGF +  
Sbjct: 391 DGLCK------------------VRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +L++A+  F++M   GC+P  V +NTLI+GLCK ER  +    +  M  +G KPD+ITY+
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
            LI+GLC + +++ A +L   F      P+VT +N LI GLC+  KVE+A
Sbjct: 493 CLISGLCSANRVEDAQRL---FDGMACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 219/408 (53%), Gaps = 20/408 (4%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N +++GL    + D+ L ++  +       ++ TY   I G CK G +  A  V+ +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDE 328
           SG+  +A T N ++ G C  G++    +L+  M     L    S+NIL+RG    G+V +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A++  + +R+ + +  + T+ +++ GLC   + NK+             RL  A      
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLC---WENKSAN-----------RLEQAMEFFKE 166

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G + +  + + L++    + ++  A  LF  M+   CSP +++YN L++G CK+ +
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 223

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA S +KE+L+ G++P++ TYS++IN  C+  K++ A ++  + ++    P+   +N 
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT-GDCDKALEIWNHILEE 567
           LI G C AG +EDA++L++ M+K  C   +VTYNTL+D L K  G    A++++N +   
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            L P I++YN  ++G C   R+S+A ++  D +     P  IT+ IL+
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYF-DEMEGKCAPNVITYSILI 390



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 154/313 (49%), Gaps = 25/313 (7%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+ GL+   K D+A+ +++ +       ++ T+ VLI G CK G +++A+ + ++   
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSD--- 57

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                          M   G   NA T N+L+ G  +  ++ +A+ LF+EM      PT 
Sbjct: 58  ---------------MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTS 102

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC----QSKKIDMALK 489
            S+N L+ G     R  +A + +++M +        TY+L++ GLC     + +++ A++
Sbjct: 103 ASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAME 162

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              +    G  PD+  Y+IL+  L  +G++ +A  L+S M    C P+++TYN LMDG  
Sbjct: 163 FFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYC 219

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G   +A  +   IL+    P++ +Y+I +   C   ++ +A+E     +    +P  +
Sbjct: 220 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 279

Query: 610 TWHILVRAVMNNG 622
           T++ L+      G
Sbjct: 280 TFNTLIAGFCKAG 292



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 17/268 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ-FEKAKRFLNSLW 127
           ++I  + K  M + A+ +F  M +I GC+A I         LC+KR     A    N L 
Sbjct: 283 TLIAGFCKAGMLEDAIKLFAEMEKI-GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 341

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
             GL P + +Y ++I G   +  L  A+  FDEM E     NV+ Y+ILIDG  K     
Sbjct: 342 GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMK 400

Query: 188 RAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            A +  E   M+   Y P VVTY  +ING CKCG     L  +++MK      ++  + +
Sbjct: 401 EAAKTLED--MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNT 458

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCKA       R+   M   G   D +TYN +I G C A ++++   L++  G   
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD--GMAC 516

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWE 334
             NV ++N LIRGL    KV+EA +I +
Sbjct: 517 APNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 297/622 (47%), Gaps = 44/622 (7%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-ELIEIQKCYCPED 74
           +  + AL LF S +R    A +P L+  I+  L   KL      ++ +LI+  +      
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR 107

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
           +  SV     +        +VF  +   F  E G++      E+A   L   ++  + P 
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFS-EMGLV------EEA---LWVYYKMDVLPA 157

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           + +   V++GLVK G       V+ +M  RG   NVV Y  LIDG  ++GD+++A  +++
Sbjct: 158 MQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            ++ E  ++P VV Y ++I GLC   R  E   M+  M+ +    + +TY + + G CK 
Sbjct: 218 EMI-EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
            +V+ A  +Y+EM+  G+  + VT+  +IDG C+  ++    +    M   G + N+  Y
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + G + EA+S+   + +     D  T+ +LI GLC                 
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC----------------- 379

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G  R+ +A  L+  M K G   NA T N+L++G+ +   +E AI +  +M+ KG  P +
Sbjct: 380 -GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++++TLI+G CK  +   A     EM+ KG  PD++ Y+ LI+G  +      A +L  +
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY-------------SNMKKRNCVPNLVT 540
             + G  P+V   + LI GLC  G++ DA++L+             + + +  C PN V 
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ GL   G   KA + ++ +    LRPD+ +  + ++G      + D      D L
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618

Query: 601 CRGILPTTITWHILVRAVMNNG 622
             GI+P +  + +L +    +G
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESG 640



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 15/282 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E+A   L  + +KG  P+  +Y T+I+G  K G++  A+ V  +M E+G+E N
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ ++ LIDG+ K G    A  ++  +V++  + P+VV Y  +I+G  K G   E   + 
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY-------------REMVESGIFVDA 276
             M++     + FT    I GLCK G +  A +++              E+  S    + 
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           V Y A+I G C  G+I +  + +  M   G   +V +  ++I+G      + + + +   
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
           + +     +S+ + VL  G  ++GYL  A++   ++   G G
Sbjct: 617 ILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/641 (27%), Positives = 314/641 (48%), Gaps = 52/641 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +    ++N+L+  KN  + L  F   +R   + H    F  +L RL+  +L      +  
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHV-R 134

Query: 63  LIEIQKCYCPEDVA-----LSVIQA-----------------YGKNSMPDKALDVFQRMN 100
           ++ I+ C    +V      LS I +                  GK  M D A D++ +M 
Sbjct: 135 ILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML 194

Query: 101 E--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     F     ILC+K + ++AK  ++ ++     P+ ++Y ++I G  ++ +L 
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLD 254

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A A+FD M + G + N V Y+ LI+G   +G    A ++ E +V +  + P V TY + 
Sbjct: 255 LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV-QKGIEPTVYTYTIP 313

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +  LC  G   E +E+  +MKK     +  T+ + I GL + G  E A  +Y +M+  G+
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
               VTYNA+I+  C  G+ +  F +++ M   G L +  +YN +I+     G + +A+ 
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           I++ + +   + +  T+  LI G CK G LN A+++L  ++  G                
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             G+L  A SL   M +HG   N  T  ++++G+   +K+++A+ LF +M   G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN +I+G  K     EA +F  +M+++G  P++ITY+  I+GLC++ +  +A K+  + 
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDA--LQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            ++ + P++  Y+ LI+GLC  G+ EDA    L + +    C PN+ TY TL+ GL   G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
            C +A ++   + ++ L+P    Y   L G C   ++  A 
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 223/462 (48%), Gaps = 23/462 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  +FE A    + +   GL P   +Y  +IN L   G    A  +F  M   G   +
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I  F   GD  +A  I+++++   S  PNV+TYN +I G CK G  +  + + 
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS-PNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK N  + D++TY   I G  + G +E A  ++  M+E GI  + VTY A+IDG+   
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ +   L+  M   G L +  +YN++I G  +   + EA +    + ++    +  T+
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
              I+GLC+NG    A +I +E                  M+K     N YT +SL+ G 
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHE------------------MEKRNYFPNLYTYSSLIYGL 632

Query: 409 IQASKLENAIF--LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            Q  + E+A    L   ++  GC P V +Y TL+ GLC   R  EA   V  M +KG +P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
               Y  L+ G C++ K++ AL +       GF   ++ Y  LI  LC    +E+A  ++
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
             M +++   + V +  L+DGL K G+ D  L++  H++E R
Sbjct: 753 QTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLL-HVMESR 793



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 205/446 (45%), Gaps = 56/446 (12%)

Query: 235 NEREKDSFTYCSFIHGLCKAGN---VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           N +    +T CSF   L + G    V+ A  +Y +M+ SGI    +T+N MI+  C+ G+
Sbjct: 158 NSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR 217

Query: 292 IKEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++E    +  +       N  +Y  LI G   N  +D A ++++ + +  C+ +S T+  
Sbjct: 218 VQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LINGLC  G L +A+ +L E+ + G                  G  ++A  L+ +M K G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T  +L++G  +  K E AI L+ +M   G  PT V+YN LIN LC   RF  A+
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 454 SFVK-----------------------------------EMLEKGWKPDMITYSLLINGL 478
           +  K                                   +ML+ G  P++ITY+ LI G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+   ++ A++L       G  PD   Y  LI G    GK+E A  L+  M +    PN 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY  ++DG F     D AL ++  ++E    P   +YN+ + G    + +S+A  F   
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 599 ALCRGILPTTITWHILVRAVMNNGAS 624
            + +G+LP  IT+   +  +  NG +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRT 603



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 222/481 (46%), Gaps = 42/481 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE--- 73
           N  T  AL    +R+  +  +  L+H +L   + P  V + + I +L       C E   
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL-------CVEGRF 393

Query: 74  DVALSVIQ-AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           + A ++ +      S+P       Q  NEI  C     C     +KA    + + + G  
Sbjct: 394 ETAFTIFKWMLSHGSLPST-----QTYNEIIKC----FCLMGDIQKAMVIFDKMLKAGSS 444

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+V +Y T+I G  K G+L  A+ + + M   G++ +   Y  LI GF + G    A  +
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  + ME  + PN VTY  +I+G     + D+ L ++ +M ++     S TY   I G  
Sbjct: 505 FYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K  ++  AE    +MV+ G+  + +TY + IDG CR G+    F+++  M ++    N+ 
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 312 SYNILIRGLLENGKVDEA--ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +Y+ LI GL + G+ ++A   ++   L    C  +  T+  L+ GLC             
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC------------- 670

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                GEGR  +A  LV  M K G + +     +L+ G  +  K+E+A+ +F  M   G 
Sbjct: 671 -----GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              +  Y  LI  LCK     EA    + MLEK W  D + +++L++GL +  + D+ LK
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLK 785

Query: 490 L 490
           L
Sbjct: 786 L 786



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 161/359 (44%), Gaps = 21/359 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCR-AGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLEN 323
           +V   +F  A     ++   CR  G++K   +    +  K      + S+  L+  L + 
Sbjct: 121 LVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKF 180

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
             VD A  ++  +          T   +IN LCK                  +GR+ +A 
Sbjct: 181 DMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK------------------KGRVQEAK 222

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +++ + ++    NA+T  SL+ G  +   L+ A  +F  M + GC P  V+Y+TLINGL
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C   R  EA   ++EM++KG +P + TY++ +  LC +     A++L  +  ++G  P++
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             +  LI GL   GK E A+ LY  M     VP  VTYN L++ L   G  + A  I+  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +L     P   +YN  +K  C    +  A    +  L  G  P  IT++ L+      G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +V+R  +  S +    + G+   + +++ L+  L +   +D+A  +  + L  G  P + 
Sbjct: 146 EVKRVTQFLSEINSKYDFGYT--LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            +N +I+ LC  G+V++A  + S++ + +  PN  TY +L+ G  +  + D A  +++ +
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +++   P+ ++Y+  + GLCS  R+ +A + L + + +GI PT  T+ I + ++ + G S
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 625 T 625
           +
Sbjct: 324 S 324


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 169/597 (28%), Positives = 298/597 (49%), Gaps = 40/597 (6%)

Query: 61  LELIEIQKC--YCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------- 109
           LE+++   C  + P + A+S +++   K    ++AL++ +R+ + FG    +        
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALID 375

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC+ R+F +A+   + + + GL+P+  +Y  +I+   + G L  AL+   EM + G++ 
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  YN LI+G  K GD + A E +   ++   + P VVTY  ++ G C  G+ ++ L +
Sbjct: 436 SVYPYNSLINGHCKFGD-ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M         +T+ + + GL +AG +  A +++ EM E  +  + VTYN MI+G+C 
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + + FE  + M  KG + +  SY  LI GL   G+  EA    + L + NC  +   
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLADAA----------SLVNRMD 390
           +  L++G C+ G L +A+ +  E+ + G        G L D +           L+  M 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G K +     S+++   +    + A  ++  M  +GC P  V+Y  +INGLCK     
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM--ALKLCCQFLQKGFTPDVTMYNI 508
           EA     +M      P+ +TY   ++ L + + +DM  A++L    L KG   +   YN+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE-VDMQKAVELHNAIL-KGLLANTATYNM 792

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI G C  G++E+A +L + M      P+ +TY T+++ L +  D  KA+E+WN + E+ 
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +RPD ++YN  + G C    M  A E  N+ L +G++P   T     R   +N  S+
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT----SRTTTSNDTSS 905



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/606 (28%), Positives = 270/606 (44%), Gaps = 99/606 (16%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + R F  A    N +   G++PDVY Y  VI  L +  DL  A  +   M   G + N
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFDE 224
           +V YN+LIDG  KK      +++WE + ++  +      P+VVTY  ++ GLCK   F+ 
Sbjct: 262 IVPYNVLIDGLCKK------QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            LEM D M             S + GL K G +E A  + + +V+ G+  +   YNA+ID
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C+  K  E   L++ MG+ G   N V+Y+ILI      GK+D A+S    + +     
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 344 DSTTHGVLINGLCKNGYLNKA----IQILNEVEE----------GG---EGRLADAASLV 386
               +  LING CK G ++ A     +++N+  E          GG   +G++  A  L 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M   G   + YT  +L++G  +A  + +A+ LF EM+     P  V+YN +I G C+ 
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC--------------------------- 479
               +A+ F+KEM EKG  PD  +Y  LI+GLC                           
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 480 --------QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
                   +  K++ AL +C + +Q+G   D+  Y +LI G       +    L   M  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS------ 585
           R   P+ V Y +++D   KTGD  +A  IW+ ++ E   P+ ++Y   + GLC       
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 586 ----CSRMSDAFEF-------------------------LNDALCRGILPTTITWHILVR 616
               CS+M                               L++A+ +G+L  T T+++L+R
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795

Query: 617 AVMNNG 622
                G
Sbjct: 796 GFCRQG 801



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 202/401 (50%), Gaps = 18/401 (4%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T  + +HGL K  +   A  ++ +MV  GI  D   Y  +I   C    +    E+   M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC +N+V YN+LI GL +  KV EA+ I + L  K+   D  T+  L+ GLCK    
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313

Query: 362 NKAIQILNE---------------VEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
              +++++E               + EG    G++ +A +LV R+   G   N +  N+L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++   +  K   A  LF  M + G  P  V+Y+ LI+  C+  +   A SF+ EM++ G 
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           K  +  Y+ LING C+   I  A     + + K   P V  Y  L+ G CS GK+  AL+
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           LY  M  +   P++ T+ TL+ GLF+ G    A++++N + E  ++P+ ++YN+ ++G C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
               MS AFEFL +   +GI+P T ++  L+  +   G ++
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 252/528 (47%), Gaps = 55/528 (10%)

Query: 121 RFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALA--------------VFDEMF--- 162
           RF N L   +G      S+  +I+ LVK+     A +              VF+ +F   
Sbjct: 89  RFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCY 148

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+   ++   +++LI  + +    +    +++ ++ + S+ P V T + +++GL K   F
Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHF 208

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              +E+++ M       D + Y   I  LC+  ++  A+ +   M  +G  V+ V YN +
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-------NVVSYNILIRGLLENGKVDEAISIWEL 335
           IDG C+  K+      WE +G K  L       +VV+Y  L+ GL    KV E     E+
Sbjct: 269 IDGLCKKQKV------WEAVGIKKDLAGKDLKPDVVTYCTLVYGLC---KVQEFEIGLEM 319

Query: 336 LREKNCNADSTTHGV---LINGLCKNGYLNKAIQILNEVEEGG----------------E 376
           + E  C   S +      L+ GL K G + +A+ ++  V + G                +
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379

Query: 377 GR-LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           GR   +A  L +RM K G + N  T + L++ F +  KL+ A+    EM   G   +V  
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN+LING CK      A  F+ EM+ K  +P ++TY+ L+ G C   KI+ AL+L  +  
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG  P +  +  L+ GL  AG + DA++L++ M + N  PN VTYN +++G  + GD  
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           KA E    + E+ + PD  SY   + GLC   + S+A  F+ D L +G
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV-DGLHKG 606


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 263/534 (49%), Gaps = 42/534 (7%)

Query: 104 GCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           GCE  I         L    + ++A +F NS+ + G +PDV ++ T+I+G  K+G     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGD----YMRAKEIWERLVMETSVYPNVVTYN 210
             + ++  +R    +V  Y  +I G+ K GD    Y RA      L        +V++Y 
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL--------DVISYT 112

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I GL    R DE  E+++ +K      +   Y + I GL KAG +E   + + EM  S
Sbjct: 113 TVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS 172

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
                  TY  +IDG C+A  + +  +++E M +KGC+ + ++Y  LI G  +  K+DEA
Sbjct: 173 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA 232

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
             + +++  K     + T+G +++G CK       + ++NE +E           ++ +M
Sbjct: 233 RKLLDVMLTKGPEPTAVTYGSIVHGFCK-------LDMINEAKE-----------VIAQM 274

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + GC+   +   SL++ ++   + E A  +  EM+ +GC+P V+ Y +LI+ L    R 
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA      M+EKG  PD +TY  +I    +   ++ A ++     + G  PD   YN L
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 394

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE-ER 568
           + G     +V+ A  +Y  M      PN VT+N LM GLFK G  D+A  ++  +LE E 
Sbjct: 395 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEE 454

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + P ++SY I + GL    R+S+AF    + + RGI+P   T+  L+ ++   G
Sbjct: 455 VPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAG 508



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 275/577 (47%), Gaps = 42/577 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           +VI         D+A   F  M +  GCE  ++         C+  Q +   + LN   +
Sbjct: 12  TVISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK 70

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET----NVVCYNILIDGFFKKG 184
           +  +PDV+ Y +VI+G  K+GDL       D  + R V      +V+ Y  +I G     
Sbjct: 71  R-FRPDVFLYTSVIHGYCKAGDL-------DTGYFRAVTPKASLDVISYTTVIKGLADSK 122

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A E++E L       PNVV Y  +I+GL K GR ++ L+ ++ M  +       TY
Sbjct: 123 RIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              I GLCKA  +  A +V+ +MV+ G   D +TY  +IDGF +A K+ E  +L +VM  
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           KG     V+Y  ++ G  +   ++EA  +   +RE+ C         L++     G   +
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           A Q+L E+   G                  GR+ +A  + + M + GC  +A T  +++ 
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            F +   +E A  + + M++ G  P   +YN+L++G  K+ER  +A+     M+  G KP
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQL 525
           + +T+++L++GL +  K D A  L  + L+K    P +  Y ILI GL  AG+V +A   
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQ 481

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M  R  +P   TY +L+  L K G   +A ++   +++  + PD+ +Y+  + GL  
Sbjct: 482 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLID 541

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            S +  A++   + + RG  P  +T+ +L R     G
Sbjct: 542 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 241/544 (44%), Gaps = 73/544 (13%)

Query: 35  AHSPHLFHHILRRLID---PKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDK 91
           A  P + H +L + +    P + ++ S I         YC    A  +   Y +   P  
Sbjct: 55  AGQPQVGHKLLNQALKRFRPDVFLYTSVI-------HGYCK---AGDLDTGYFRAVTPKA 104

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           +LDV      I G     L   ++ ++A      L   G  P+V +Y  VI+GL+K+G +
Sbjct: 105 SLDVISYTTVIKG-----LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRI 159

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
              L  F+EM           Y ++IDG  K      A +++E++V +  V P+ +TY  
Sbjct: 160 EDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV-PDTITYTT 218

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I+G  K  + DE  ++ D M     E  + TY S +HG CK   +  A+ V  +M E G
Sbjct: 219 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 278

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
                  + +++  +   G+ +E +++   M  +GC  +V+ Y  LI  L   G+V EA 
Sbjct: 279 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEAR 338

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG------------- 377
            +++ + EK C  D+ T+G +I    K G +  A +IL  + + G G             
Sbjct: 339 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 398

Query: 378 ----RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPT 432
               R+  A  + +RM   G K NA T N LM+G  +  K + A  LFKEM  ++   PT
Sbjct: 399 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGW---------------------------- 464
           +VSY  LI+GL K  R  EA+   +EM+++G                             
Sbjct: 459 LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 518

Query: 465 -------KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
                   PD+  YS LI GL  S  +D A  +  + +++G  P+   Y +L  G  +AG
Sbjct: 519 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578

Query: 518 KVED 521
           +  D
Sbjct: 579 RALD 582



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 14/285 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI    L++LL +      A  +FDS   E G A     +  I++       V     IL
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMI-EKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 376

Query: 62  ELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCR 112
           EL+  +    P+  A  S++  Y K    D+A  V+ RM       N + F      L +
Sbjct: 377 ELMA-KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 435

Query: 113 KRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
             + ++A      + EK  + P + SY  +I+GL K+G +  A   F EM +RG+     
Sbjct: 436 DGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI    K G    AK++ E +V +  V P+V  Y+ +I GL      D   +++  
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMV-KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 554

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           M K     +  TY     G   AG     E V ++    G+ ++A
Sbjct: 555 MMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQGVAMEA 598


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 247/486 (50%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +SY  VI GL K+G    A+ +FDEM E+ V  N + YN +IDG  KKGD      +
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           W ++ +   + PNV+TYNV+++GLC+ GR  E   + D M   +   D FTY     G  
Sbjct: 246 WSQM-LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-V 311
           + G+ +    ++ E V+ G+ + A T + +++G C+ GKI +  E+ + +   G L   V
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G ++ A SI++ ++ +    D  T+  LINGL K             V
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK-------------V 411

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           E     R+ +A  LV  M+K+G   +  T N+L++ + +A +LE    +  +M  KG  P
Sbjct: 412 E-----RITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKP 466

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY +++N  CK  +  EA + + +M  K   P    Y+ +I+   +    D A  L 
Sbjct: 467 NVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLA 526

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G  P +  YN+LI GLC   ++ +A +L  +++     P++++YNTL+      
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            + D+ALE+   + +  ++P   +Y +    L    R+ +        L + ++P +  +
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIY 646

Query: 612 HILVRA 617
           +I+V A
Sbjct: 647 NIMVDA 652



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 239/472 (50%), Gaps = 22/472 (4%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           +  D+ GA   F+ +       +   +N  +      GD   A  +  R+  + +  PN 
Sbjct: 132 RHADVRGA---FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNA 188

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            +YNV+I GL K G   + ++++D M +     +  TY + I G  K G++E   R++ +
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQ 248

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGK 325
           M+  G+  + +TYN ++ G CRAG++ E    L E+  RK   +  +Y+IL  G    G 
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
               +S++E   +K     + T  +L+NGLCK+G ++KA ++L               +L
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQ--------------TL 354

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           VN     G        N+L+NG+ Q   LE A  +F++M  +   P  ++YN LINGL K
Sbjct: 355 VN----SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           VER  EA+  V EM + G  P + T++ LI+   ++ +++    +     +KG  P+V  
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  +++  C  GK+ +A+ +  +M  ++ +P    YN ++D   + G  D+A  +   + 
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
              + P I++YN+ +KGLC  S++S+A E L+     G+ P  I+++ L+ A
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA 582



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 245/512 (47%), Gaps = 30/512 (5%)

Query: 66  IQKCYCPEDV--ALSVIQAYGKNSMPDKALDVFQRMNEIFGC-EAGILCRKRQFEKAKRF 122
           +Q C    D+  A+ +++  G +  P  A + F     I G  +AG  C       A + 
Sbjct: 159 VQACVVAGDLDEAVGMLRRMGCDGAP--APNAFSYNVVIAGLWKAGTDC------DAVKL 210

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + + EK + P+  +Y T+I+G +K GDL     ++ +M   G++ NV+ YN+L+ G  +
Sbjct: 211 FDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCR 270

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G       + + +     V P+  TY+++ +G  + G     L +++   K   +  ++
Sbjct: 271 AGRMGETAAVLDEMASRKMV-PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T    ++GLCK G +  AE V + +V SG+    V YN +I+G+C+ G ++  F +++ M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 303 -GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             R    + ++YN LI GL +  ++ EA  +   + +   N    T   LI+   + G L
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            K   IL++++E G                  G++ +A ++++ M        A   N++
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++ +I+    + A  L ++M   G  P++V+YN LI GLCK  +  EA   +  +   G 
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD+I+Y+ LI+  C     D AL+L  +  + G  P    Y +L   L  AG+V +   
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           LY  M  ++ VP    YN ++D   K G+  K
Sbjct: 630 LYQQMLDKDVVPCSGIYNIMVDAYAKCGEESK 661



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 199/424 (46%), Gaps = 20/424 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L+ +  + + PD ++Y  + +G  ++GD    L++F+E  ++GV+  
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G   +A+E+ + LV  + +    V YN +ING C+ G  +    ++
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLV-NSGLLQTTVIYNTLINGYCQIGDLEGAFSIF 386

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK      D  TY + I+GL K   +  A  +  EM ++G+     T+N +ID + RA
Sbjct: 387 QQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRA 446

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M  KG   NVVSY  ++    +NGK+ EA++I + +  K+    +  +
Sbjct: 447 GQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVY 506

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+   + G  ++A                    L  +M   G   +  T N L+ G 
Sbjct: 507 NAIIDAYIECGSTDQAFM------------------LAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + S++  A  L   +   G +P V+SYNTLI+  C       A    KEM + G KP  
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSP 608

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY +L + L  + ++     L  Q L K   P   +YNI++      G+      L   
Sbjct: 609 RTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKE 668

Query: 529 MKKR 532
           M  +
Sbjct: 669 MSDK 672



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 26/358 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  KA+  L +L   GL      Y T+ING  + GDL GA ++F +M  R +  +
Sbjct: 338 LCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPD 397

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVME---TSVYPNVVTYNVMINGLCKCGRFDECL 226
            + YN LI+G    G   R  E  + LV+E     V P+V T+N +I+   + G+ ++C 
Sbjct: 398 HITYNALINGL---GKVERITEAHD-LVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCF 453

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M++   + +  +Y S ++  CK G +  A  +  +M    +   A  YNA+ID +
Sbjct: 454 IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
              G   + F L E M   G   ++V+YN+LI+GL +  ++ EA  + + LR      D 
Sbjct: 514 IECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            ++  LI+  C     ++A+++  E                  M K G K +  T   L 
Sbjct: 574 ISYNTLISACCYRSNTDRALELEKE------------------MWKCGIKPSPRTYRMLF 615

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +    A ++     L+++M  K   P    YN +++   K     +  +  KEM +KG
Sbjct: 616 SSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 25/314 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           +F  +  RLI P  + + + I  L ++++     D+ + +     KN + + +++ F  +
Sbjct: 385 IFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM----EKNGV-NPSVETFNTL 439

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
            + +G       R  Q EK    L+ + EKGLKP+V SYG+++N   K+G +L A+A+ D
Sbjct: 440 IDAYG-------RAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +MF + V      YN +ID + + G   +A  + E++   + V P++VTYN++I GLCK 
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM-KSSGVPPSIVTYNLLIKGLCKQ 551

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            +  E  E+ D ++      D  +Y + I   C   N + A  + +EM + GI     TY
Sbjct: 552 SQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTY 611

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLL---ENGKV--------D 327
             +      AG++ E   L++ M  K  +     YNI++       E  KV        D
Sbjct: 612 RMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSD 671

Query: 328 EAISIWELLREKNC 341
           + I++ +     NC
Sbjct: 672 KGIAVGDYTSMTNC 685


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 270/505 (53%), Gaps = 21/505 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           QFE A + L+ L E+G  P V S+ +++  L K   +  AL +F+ M ++  E N   YN
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYN 395

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I+ID     G    A  I + +     ++PN++T N+M++ LCK  +F+   EM++   +
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEM-EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +S TYCS I GL K GNV+ A R++  M+++G   + V Y ++I  F   G+ ++
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED 514

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             ++++ M R+GC  ++   N  +  + + G V++  +I+E ++      D  ++ +LI+
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GL K                 G+ R  + +S+ + M + G  L+A   N++++GF ++ K
Sbjct: 575 GLTK----------------AGQAR--ETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L+ A  + +EM  K   PTV +Y ++I+GL K++R  EAY   +E   KG + ++I YS 
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G  +  +ID A  +  + ++KG TP+V  +N L+  L  A ++ +AL  + +MK+  
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN  TY+ L++GL +    +KA   W  + ++ L P++++Y   + GL     ++DA 
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796

Query: 594 EFLNDALCRGILPTTITWHILVRAV 618
                    G  P   +++ L+  +
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGM 821



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 173/643 (26%), Positives = 303/643 (47%), Gaps = 73/643 (11%)

Query: 46  RRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGC 105
           RRL D + V+   R L+       Y        +I A  +   P++AL++ ++M E+ G 
Sbjct: 161 RRLDDAERVIAAMRRLKFRPAFSAYT------VLIGAMAEARQPERALELLRQMQEV-GY 213

Query: 106 EAGI---------LCRKRQFEKAK-----------------------------------R 121
           E G+         L R+ + E A                                    +
Sbjct: 214 EVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWK 273

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM-FERGVETNVVCYNILIDGF 180
           F + L  +GLKPD  SY ++I  L K+G L  A  +F +M  ER V      YN +I G+
Sbjct: 274 FFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC-AYAYNTMIMGY 332

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
              G +  A ++ ++L  E    P+VV++N ++  L K  + DE L +++ MKK+  E +
Sbjct: 333 GSAGQFENAYKLLDQL-KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPN 390

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           S TY   I  LC AG VE A  +  EM  +G+F + +T N M+D  C+A K +  +E++E
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
              ++GC  N V+Y  LI GL + G VD+A  ++E + +   NA+   +  LI     +G
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
                 +I  E+   G                  G +    ++   +  +G   +  + +
Sbjct: 511 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 570

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            L++G  +A +      +F  M ++G +    +YN +++G CK  +  +AY  ++EM  K
Sbjct: 571 ILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK 630

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              P + TY  +I+GL +  ++D A  L  +   KG   +V +Y+ LI G    G++++A
Sbjct: 631 RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             +   M K+   PN+ T+N+LMD L K  + ++AL  +  + E +  P+  +Y+I + G
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILING 750

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           LC   + + AF F  +   +G++P  +T+  ++  +   G  T
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNIT 793



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/640 (25%), Positives = 294/640 (45%), Gaps = 34/640 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKL---VVHVSRILELI 64
           ++ +L+  +NP  A   F +++     A SPH         + P L   +  + ++LE +
Sbjct: 84  VIPVLRTLRNPSLAAPFFLASS-----AASPHPLPADAYNAVLPFLSHDLAAMEKVLEEM 138

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQF 116
            +     P      ++ A  +    D A  V   M  +        +    G +   RQ 
Sbjct: 139 SVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQP 198

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E+A   L  + E G +  V  + T++  L + G + GALA+ DE+    +E ++V YN+ 
Sbjct: 199 ERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVC 258

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           ID F K G+   A + +  L  +  + P+ V+Y  MI  LCK GR  E  E++ +M+   
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQ-GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
               ++ Y + I G   AG  E A ++  ++ E G     V++N+++    +  K+ E  
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377

Query: 297 ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
            L+E M +    N  +YNI+I  L   GKV+EA  I + +       +  T  ++++ LC
Sbjct: 378 TLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLC 437

Query: 357 KNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAY 399
           K      A ++     +                 G +G + DA  L   M   G   N  
Sbjct: 438 KAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPV 497

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
              SL+  F    + E+   +FKEM+R+GC P +   NT ++ + K     +  +  +++
Sbjct: 498 VYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
              G+ PD+ +YS+LI+GL ++ +      +     Q+GF  D   YN ++ G C +GK+
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKL 617

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A ++   MK +   P + TY +++DGL K    D+A  ++     + +  ++I Y+  
Sbjct: 618 DKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 677

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           + G     R+ +A+  L + + +G+ P   TW+ L+ A++
Sbjct: 678 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 717


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 263/474 (55%), Gaps = 20/474 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR R+   A   +  + + G +P+  ++ T+INGL   G +  AL + D M E G + +
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++  N L++G    G    A  + +++V E    PN VTY  ++N +CK G+    +E+ 
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D+  Y   I GLCK G+++ A  ++ EM   GI  + +TYN +I GFC A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +  +L  +++ RK   NVV++++LI   ++ GK+ EA  + + +  +    D+ T+
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK  +L+KA Q                  +V+ M   GC  N  T N L+NG+
Sbjct: 372 TSLIDGFCKENHLDKANQ------------------MVDLMVSKGCDPNIRTFNILINGY 413

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A+++++ + LF++MS +G     V+YNTLI G C++ +   A    +EM+ +   P++
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY +L++GLC + + + AL++  +  +     D+ +YNI+IHG+C+A KV+DA  L+ +
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  +   P + TYN ++ GL K G   +A  ++  + E+   PD  +YNI ++ 
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 253/491 (51%), Gaps = 20/491 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V  +  + + + K+      LA+  +M  +G+  N+   +I+I+ F +      A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             +++ +    PN +T++ +INGLC  GR  E LE+ DRM +   + D  T  + ++GLC
Sbjct: 146 MGKII-KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
            +G    A  +  +MVE G   +AVTY  +++  C++G+     EL   M  +   L+ V
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+I+I GL ++G +D A +++  +  K    +  T+ +LI G C               
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC--------------- 309

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR  D A L+  M K     N  T + L++ F++  KL  A  L KEM  +G +P
Sbjct: 310 ---NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             ++Y +LI+G CK     +A   V  M+ KG  P++ T+++LING C++ +ID  L+L 
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   D   YN LI G C  GK+  A +L+  M  R   PN+VTY  L+DGL   
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ +KALEI+  I + ++  DI  YNI + G+C+ S++ DA++       +G+ P   T+
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 612 HILVRAVMNNG 622
           +I++  +   G
Sbjct: 547 NIMIGGLCKKG 557



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 271/545 (49%), Gaps = 28/545 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+D+F+ M           F      + + +Q++        +  KG+  ++Y+   +
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   L  A +   ++ + G E N + ++ LI+G   +G    A E+ +R+V E  
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-EMG 188

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+++T N ++NGLC  G+  E + + D+M +   + ++ TY   ++ +CK+G    A 
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
            + R+M E  I +DAV Y+ +IDG C+ G +   F L+  M  KG   N+++YNILI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G+ D+   +   + ++  N +  T  VLI+   K                  EG+L 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK------------------EGKLR 350

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L   M   G   +  T  SL++GF + + L+ A  +   M  KGC P + ++N LI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           NG CK  R  +     ++M  +G   D +TY+ LI G C+  K+++A +L  + + +   
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  Y IL+ GLC  G+ E AL+++  ++K     ++  YN ++ G+      D A ++
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  + ++P + +YNI + GLC    +S+A          G  P   T++IL+RA + 
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590

Query: 621 NGAST 625
           +G +T
Sbjct: 591 DGDAT 595



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 246/481 (51%), Gaps = 34/481 (7%)

Query: 56  HVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---- 108
            VS  LEL++  ++  + P+ + + +++     +    +A+ +  +M E +GC+      
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTY 231

Query: 109 -----ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                ++C+  Q   A   L  + E+ +K D   Y  +I+GL K G L  A  +F+EM  
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           +G+ TN++ YNILI GF   G +    ++  R +++  + PNVVT++V+I+   K G+  
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLL-RDMIKRKINPNVVTFSVLIDSFVKEGKLR 350

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E+   M       D+ TY S I G CK  +++ A ++   MV  G   +  T+N +I
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G+C+A +I +  EL+  M  +G + + V+YN LI+G  E GK++ A  +++ +  +   
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  T+ +L++GLC NG   KA++I  ++E                  K   +L+    N
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIE------------------KSKMELDIGIYN 512

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            +++G   ASK+++A  LF  +  KG  P V +YN +I GLCK     EA    ++M E 
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD  TY++LI           ++KL  +  + GF+ D +   ++I  L S G+++ +
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631

Query: 523 L 523
            
Sbjct: 632 F 632



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 35/245 (14%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K ++AI LF++M      PTV+ ++ L + + K +++    +  K+M  KG   ++ T S
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C+ +K+ +A     + ++ G+ P+   ++ LI+GLC  G+V +AL+L   M + 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 533 NCVPNLVTYNTLMDGL-----------------------------------FKTGDCDKA 557
              P+L+T NTL++GL                                    K+G    A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +E+   + E  ++ D + Y+I + GLC    + +AF   N+   +GI    IT++IL+  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 618 VMNNG 622
             N G
Sbjct: 308 FCNAG 312


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 262/523 (50%), Gaps = 33/523 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  Q E A+R   ++    + P+ Y+Y  V+ GL   G +  ALAV DEM  R      
Sbjct: 95  CRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIP 151

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y+++I+   + G Y  A  + E L  + S   +    N++IN +C  G  DE LEM  
Sbjct: 152 PMYHVIIESACRSGGYSSALRVLEALHAKGSTL-DTGNCNLVINAICDQGCVDEGLEMLR 210

Query: 231 RMKKNEREKDSFTYCSFIHGLCKA---GNVE-------GAERVYREMVESGIFVDAVTYN 280
           ++     E D  +Y + + GLC A   G+VE              +M + G   D   Y 
Sbjct: 211 KLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYA 270

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +IDG C+ G  +   E+   M   G   NVV YN +++G+    + ++A  +   + +K
Sbjct: 271 TIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK 330

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
           NC  D  T  +L++  C+NG +++ I++L ++ E                  HGC  +  
Sbjct: 331 NCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE------------------HGCMPDVI 372

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  +++NGF +   ++ A+ L K M   GC P  +SY  ++ GLC  ER+ +A   +  M
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +++G  P+ +T++ +IN LC+   ++ A++L  Q L  G  PD+  Y+ +I GL  AGK 
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E+AL+L + M  +   PN++TY+++   L + G  DK ++++++I +  +R D + YN  
Sbjct: 493 EEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAV 552

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  LC       A +FL   +  G +P   T+  L++ + + G
Sbjct: 553 ISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 210/445 (47%), Gaps = 31/445 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VV YN M+ G C+ G+ +    +   +       +++TY   + GLC  G +  A  V  
Sbjct: 84  VVDYNAMVAGYCRVGQVEAARRLAAAVPV---PPNAYTYFPVVRGLCGRGRIADALAVLD 140

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG 324
           EM           Y+ +I+  CR+G       + E +  KG  L+  + N++I  + + G
Sbjct: 141 EMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG 200

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKN----------GYLNKAIQILNEVEEG 374
            VDE + +   L    C AD  ++  ++ GLC              + K  + L+++ + 
Sbjct: 201 CVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 EG    A  +++RM  +G K N    N+++ G   A + E A
Sbjct: 261 GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKA 320

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM +K C    V++N L++  C+          +++MLE G  PD+ITY+ +ING
Sbjct: 321 EELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+   ID A+ L       G  P+   Y I++ GLCS  +  DA +L S M ++ C+PN
Sbjct: 381 FCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPN 440

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            VT+NT+++ L K G  ++A+E+   +L     PD+ISY+  + GL    +  +A E LN
Sbjct: 441 PVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
             + +GI P  IT+  +  A+   G
Sbjct: 501 VMINKGITPNVITYSSMAFALAREG 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 198/404 (49%), Gaps = 32/404 (7%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I  LC AG    A    R +  +G     V YNAM+ G+CR G+++    L   +   
Sbjct: 57  ALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVP 113

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N  +Y  ++RGL   G++ +A+++ + +  ++C      + V+I   C++G  + A+
Sbjct: 114 P--NAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           ++L  +   G                 +G + +   ++ ++   GC+ +  + N+++ G 
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231

Query: 409 IQASKLENAIFLFKE----------MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
             A +  +   L  E          M++ GC+P +  Y T+I+G+CK      A   +  
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G KP+++ Y+ ++ G+C + + + A +L  +  QK    D   +NIL+   C  G 
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           V+  ++L   M +  C+P+++TY T+++G  K G  D+A+ +  ++     +P+ ISY I
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            LKGLCS  R  DA E ++  + +G LP  +T++ ++  +   G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKG 455



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 2/263 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    ++    L  + E G  PDV +Y TVING  K G +  A+ +   M   G + N
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y I++ G      ++ A+E+  R++ +    PN VT+N +IN LCK G  ++ +E+ 
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQ-GCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  N    D  +Y + I GL KAG  E A  +   M+  GI  + +TY++M     R 
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I +  ++++ +       + V YN +I  L +  + D AI     +    C  + +T+
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584

Query: 349 GVLINGLCKNGYLNKAIQILNEV 371
             LI GL   G L +A  +L+E+
Sbjct: 585 TALIKGLASEGLLCEAQDLLSEL 607


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 256/516 (49%), Gaps = 20/516 (3%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G+   KR  E     L  + E G  PDV +Y TVING  + G +  A  +F EM ++G+ 
Sbjct: 134 GLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIP 193

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  +IDG  K     RAK ++++++ +  V P+  TYN +I+G    G++ E ++
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQMI-DRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M + M  +  E D  TY   +  LCK G    A   +  M   GI  D   Y  ++ G+ 
Sbjct: 253 MLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA 312

Query: 288 RAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G + E     ++M G     N   +NI+     +   ++EA+ I+  +R++  + D  
Sbjct: 313 TKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVV 372

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           + G LI+ LCK                   GR+ DA    N+M   G   N +  +SL+ 
Sbjct: 373 SFGALIDALCK------------------LGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G     K E A  LF E+  +G     V +NTL+  LC   R  EA   +  M+  G +P
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++I+Y+ L+ G C + +ID A KL    +  G  P+   Y IL+ G C A +V+DA  L+
Sbjct: 475 NVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLF 534

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M  +   P + TYNT++ GLF+TG   +A E++ +++  R + DI +YNI L GLC  
Sbjct: 535 REMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKN 594

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + +AF+       +     ++T++I++ A++  G
Sbjct: 595 NFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGG 630



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 250/496 (50%), Gaps = 25/496 (5%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+  +Y  +I    + G L    A F  + + G   NV+  + L+ G     D  R  
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGL---CDAKRVD 142

Query: 191 EIWERLVMETSVY---PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           E  + L++  S +   P+VV YN +ING  + G+ ++   ++  M       +  TY + 
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I GLCKA  V+ A+ V+++M++ G+  D  TYN +I G+   GK KE  ++ E M   G 
Sbjct: 203 IDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGL 262

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             + ++Y +L+  L +NG+  EA   ++ +  K    D   + +L+     +GY  K   
Sbjct: 263 EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILL-----HGYATK--- 314

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     G L++  S ++ M  +G   N    N +   + + + +E A+ +F +M +
Sbjct: 315 ----------GALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G SP VVS+  LI+ LCK+ R  +A     +M+ +G  P++  +S L+ GLC   K + 
Sbjct: 365 QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +L  + L +G   D   +N L+  LC+ G+V +A +L   M +    PN+++YNTL+ 
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVA 484

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G   TG  D+A ++ + ++   L+P+  +Y I L+G C   R+ DA+    + L +G+ P
Sbjct: 485 GHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544

Query: 607 TTITWHILVRAVMNNG 622
              T++ ++  +   G
Sbjct: 545 VVATYNTILHGLFQTG 560



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 25/462 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A+ F +S++ KG+KPDV  Y  +++G    G L    +  D M   GV  N
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +NI+   + KK     A  I+ ++  +  + P+VV++  +I+ LCK GR D+ +  +
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M       + F + S ++GLC  G  E AE ++ E+++ GI VDAV +N ++   C  
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E   L ++M R G   NV+SYN L+ G    G++DEA  + +++       +  T+
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTY 514

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L+ G CK                    R+ DA SL   M   G      T N++++G 
Sbjct: 515 TILLRGYCK------------------ARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 409 IQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            Q  +   A  L+  M  SR  C   + +YN ++NGLCK     EA+   + +  K  + 
Sbjct: 557 FQTGRFSEANELYLNMINSRTKCD--IYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D +T++++I  L +  + + A+ L       G  PDV  Y ++   L   G + +   L+
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLF 674

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           S M+K    PN    N L+  L   GD  +A  ++ + L+E+
Sbjct: 675 SAMEKSGTAPNSHMLNALVRRLLHRGDISRA-GVYLYKLDEK 715



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 190/405 (46%), Gaps = 30/405 (7%)

Query: 82  AYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           AY K +M ++A+ +F +M +         FG     LC+  + + A    N +  +G+ P
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTP 404

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           +++ + +++ GL   G    A  +F E+ ++G+  + V +N L+     +G  M A+ + 
Sbjct: 405 NIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLI 464

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + L++   V PNV++YN ++ G C  GR DE  ++ D M  N  + + FTY   + G CK
Sbjct: 465 D-LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCK 523

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVV 311
           A  V+ A  ++REM+  G+     TYN ++ G  + G+  E  EL+  M   R  C ++ 
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKC-DIY 582

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YNI++ GL +N  VDEA  ++  L  K+   DS T  ++I  L K              
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKG------------- 629

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR  DA  L   +  +G   +  T   +    I+   L     LF  M + G +P
Sbjct: 630 -----GRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP 684

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
                N L+  L        A  ++ ++ EK +  +  T S+LI+
Sbjct: 685 NSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS 729



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 411 ASKLENAIFLFKEMSRKGCS---PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +S  E  + LF  M+R+  S   P   +Y+ LI   C++ R    ++    +L+ GW+ +
Sbjct: 65  SSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVN 124

Query: 468 MITYSLLINGLCQSKKIDMALK-LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +I  S L+ GLC +K++D A   L  +  + G  PDV  YN +I+G    G+VE A  L+
Sbjct: 125 VIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLF 184

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M  +   PN+VTY T++DGL K    D+A  ++  +++  ++PD  +YN  + G  S 
Sbjct: 185 LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLST 244

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +  +  + L +    G+ P  IT+ +L+  +  NG
Sbjct: 245 GKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNG 280


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 265/524 (50%), Gaps = 34/524 (6%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
               A+RFL+S+   G+ P+VY+Y  ++  L   G L  A+ V  +M   G   N V YN
Sbjct: 132 SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYN 191

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            L+  F + G+   A+ +   +  E +  PN+VT+N M+NGLCK GR +   +++D M +
Sbjct: 192 TLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D  +Y + + G CK G +  +  V+ EM + G+  D VT+ ++I   C+AG +++
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L   M  +G  +N V++  LI G  + G +D+A+   E +R+         +  LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G CK G ++ A +++ E                  M+    K +  T +++++G+ +   
Sbjct: 372 GYCKLGRMDLARELIRE------------------MEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L++A  L ++M +KG  P  ++Y++LI GLC+ +R  +A    + ML+ G +PD  TY+ 
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G C+   ++ AL L  + ++KG  PDV  Y++LI+GL  + + ++A +L   +   +
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 534 CVPNLVTYNTLM----DGLFKT------GDCDKAL-----EIWNHILEERLRPDIISYNI 578
            VP+ + Y+ LM       FK+      G C K L     +++  +L+   + D   Y+I
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G C    +  A  F    L  G  P + +   LVR +   G
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/461 (32%), Positives = 238/461 (51%), Gaps = 25/461 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V +Y  V+  L     L  A      M   GV  NV  YNIL+     +G    A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF-TYCSFI 248
             +   +       PN VTYN ++   C+ G  D    +   M++    K +  T+ S +
Sbjct: 172 VGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +GLCKAG +EGA +V+ EMV  G+  D V+YN ++ G+C+ G + E   ++  M ++G +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV++  LI    + G +++A+++   +RE+    +  T   LI+G CK G+L+ A+  
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           + E                  M K G + +    N+L+NG+ +  +++ A  L +EM  K
Sbjct: 351 VEE------------------MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P VV+Y+T+I+G CKV     A+   ++ML+KG  PD ITYS LI GLC+ K+++ A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L    LQ G  PD   Y  LI G C  G VE AL L+  M ++  +P++VTY+ L++G
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           L K+    +A  +   +  E   PD I Y+  +  LC CS+
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LC-CSK 550



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 264/537 (49%), Gaps = 43/537 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VET 168
           LC + + E+A   +  +   G  P+  +Y T++    ++G+L GA  V   M E G  + 
Sbjct: 162 LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP 221

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+V +N +++G  K G    A+++++ +V E  + P+VV+YN +++G CK G   E L +
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D  T+ S IH  CKAGN+E A  +  +M E G+ ++ VT+ A+IDGFC+
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + +     E M + G   +VV YN LI G  + G++D A  +   +  K    D  T
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  +I+G CK G L+ A Q+  ++ + G                 E RL DA  L   M 
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + + +T  +L++G  +   +E A+ L  EM RKG  P VV+Y+ LINGL K  R  
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 451 EAYSFVKEMLEKGWKPDMITYS---------------LLINGLCQSKKIDMALKLCCQFL 495
           EA+  + ++  +   PD I Y                 L+ G C    +  A K+    L
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            + +  D ++Y+ILIHG C  G V  AL  +  M +    PN  +  +L+ GLF+ G   
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC----RGILPTT 608
           +A    ++ +++ L    ++     K L   +R     + L D LC     G+LP++
Sbjct: 641 EA----DNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/541 (29%), Positives = 272/541 (50%), Gaps = 28/541 (5%)

Query: 85  KNSMPDKAL--DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           K SM DK L  D++     I G      C +++  +AK  L  + + GLKP+  +Y  +I
Sbjct: 264 KRSMVDKGLVPDLYTYDILING-----FCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 318

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G ++ GD+  A  + DEM   G+E N++ +N L++G  K G   +A EI + + ME  V
Sbjct: 319 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM-MEKGV 377

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+  TY+++I G C+        E+ D MKK +      TY   I+GLC+ GN++G   
Sbjct: 378 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 437

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           + REMV +G+  +AV Y  ++    + G+++E   + E M  +G L +V  YN LI G  
Sbjct: 438 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 497

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           +  +++EA +    + E+    ++ T+G  I+G  K G +  A +  NE           
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE----------- 546

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  M   G   N     +L+ G  +   +  A  +F+ +  +     V +Y+ LI+
Sbjct: 547 -------MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 599

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL +  +  EA+    E+ EKG  P+  TY+ LI+G C+   +D A +L  +   KG  P
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D+  YNILI GLC AG++E A  L+ +++ R   PN VTY  ++DG  K+ +   A ++ 
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L   + PD   YN+ L   C   +   A +   + L +G   +T++++ L+     +
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKS 778

Query: 622 G 622
           G
Sbjct: 779 G 779



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 255/505 (50%), Gaps = 20/505 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R  ++A     S+ +KGL PD+Y+Y  +ING         A  +  EM + G++   +
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LIDGF ++GD  +A  I + +V    +  N++ +N ++NG+CK G+ ++ LE+   
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMV-ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   E DS TY   I G C+  N+  A  +  EM +  +    +TY+ +I+G CR G 
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++    +   M   G   N V Y  L+    + G+V+E+  I E +RE+    D   +  
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI G CK                    R+ +A + +  M +   + NA+T  + ++G+ +
Sbjct: 492 LIIGFCK------------------AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A ++E A   F EM   G  P V  Y  LI G CK     EA+S  + +L +    D+ T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+LI+GL ++ K+  A  +  +  +KG  P+   YN LI G C  G V+ A QL   M 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            +   P++VTYN L+DGL K G+ ++A  +++ I    L P+ ++Y   + G C     +
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 591 DAFEFLNDALCRGILPTTITWHILV 615
            AF+ L + L RG+ P    +++++
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVIL 738



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 167/603 (27%), Positives = 284/603 (47%), Gaps = 71/603 (11%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           +KAL++ Q M E  G E             CR +   +A   L+ + ++ L P V +Y  
Sbjct: 363 EKALEIMQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +INGL + G+L G  A+  EM   G++ N V Y  L+    K+G    ++ I ER+  E 
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM-REQ 480

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+V  YN +I G CK  R +E       M +     ++ TY +FI G  KAG +E A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRG 319
           +R + EM+  G+  +   Y A+I+G C+ G + E F ++  ++ R+   +V +Y++LI G
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L  NGK+ EA  I+  L+EK    ++ T+  LI+G CK G ++KA Q+L E+   G    
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA----------- 411
                         G +  A +L + ++  G   N  T  ++++G+ ++           
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720

Query: 412 ------------------------SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
                                    K E A+ LF+EM  KG + TV S+NTLI G CK  
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSG 779

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  EA   ++EM+EK + P+ +TY+ LI+  C++  +  A +L  +  ++   P    Y 
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL-- 565
            L+HG  + G + +   L+  M  +   P+ +TY  ++D   + G+  +A ++ + IL  
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899

Query: 566 ----EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
               +   R  + + ++  +G      M +A E L   +  G +  T +   LV    N 
Sbjct: 900 GMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNG 959

Query: 622 GAS 624
             S
Sbjct: 960 ANS 962



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 166/632 (26%), Positives = 288/632 (45%), Gaps = 95/632 (15%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY-----CPEDVALSVI-QAYGKNS 87
           Y  +  L   I+R    P  V        L  I KCY      P  V   ++  +Y K  
Sbjct: 117 YGPASDLIKCIIRNSDSPLAV--------LGSIVKCYRSCNGSPNSVIFDMLMDSYRKMG 168

Query: 88  MPDKALDVF------QRMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
              +A++VF      +    +  C +  G L +  + E   +  + +    + PDVY+Y 
Sbjct: 169 FLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYT 228

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I+   K G++  A  V  EM E+           L+D          A E+ +R +++
Sbjct: 229 NMISAHCKVGNVKDAKRVLLEMGEKAR---------LLD---------EAIEL-KRSMVD 269

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + P++ TY+++ING C   R  E   M   M     + +  TY + I G  + G++E 
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A R+  EMV  GI  + + +N +++G C+AGK+++  E+ + M  KG   +  +Y++LI 
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G      +  A  + + ++++       T+ V+INGLC+ G L     IL E        
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE-------- 441

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                     M  +G K NA    +LM    +  ++E +  + + M  +G  P V  YN+
Sbjct: 442 ----------MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI G CK +R  EA +++ EMLE+  +P+  TY   I+G  ++ ++++A +   + L  G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551

Query: 499 FTP-----------------------------------DVTMYNILIHGLCSAGKVEDAL 523
             P                                   DV  Y++LIHGL   GK+ +A 
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            ++S ++++  +PN  TYN+L+ G  K G+ DKA ++   +  + + PDI++YNI + GL
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C    +  A    +D   RG+ P  +T+  +V
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 207/425 (48%), Gaps = 25/425 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++    +A      +  + +  DV +Y  +I+GL ++G +  A  +F E+ E+G+  N 
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI G  K+G+  +A ++ E + ++  + P++VTYN++I+GLCK G  +    ++D
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIK-GINPDIVTYNILIDGLCKAGEIERAKNLFD 685

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            ++      +  TY + + G CK+ N   A ++  EM+  G+  DA  YN +++  C+  
Sbjct: 686 DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEE 745

Query: 291 KIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           K ++  +L++ M  KG  + VS+N LI G  ++GK+ EA  + E + EK    +  T+  
Sbjct: 746 KFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+  CK G + +A ++  E++E                        A T  SL++G+  
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQE------------------RNVMPTAKTYTSLLHGYHN 847

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK------GW 464
              +     LF+EM  KG  P  ++Y  +I+  C+     EA     E+L K      G+
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGF 907

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +  + T S++  G   +  +D A ++    ++ G+  + T    L+ G  +    ED+  
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 967

Query: 525 LYSNM 529
           L   M
Sbjct: 968 LLKQM 972



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 210/458 (45%), Gaps = 38/458 (8%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V +++L+D + K G  + A  ++          P++++ N ++  L K  + +   ++
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLG-PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D M  ++   D +TY + I   CK GNV+ A+RV  EM E    +D             
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLD------------- 258

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
                E  EL   M  KG + ++ +Y+ILI G     +  EA  +   + +     +  T
Sbjct: 259 -----EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G  + G + +A +I +E                  M   G + N    N+L+NG
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDE------------------MVACGIEANLIIWNTLLNG 355

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A K+E A+ + +EM  KG  P   +Y+ LI G C+ +    A+  + EM ++   P 
Sbjct: 356 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 415

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TYS++INGLC+   +     +  + +  G  P+  +Y  L+      G+VE++  +  
Sbjct: 416 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 475

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+++  +P++  YN+L+ G  K    ++A      +LE RLRP+  +Y   + G     
Sbjct: 476 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 535

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            M  A  + N+ L  G+LP    +  L+      G  T
Sbjct: 536 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 187/669 (27%), Positives = 318/669 (47%), Gaps = 66/669 (9%)

Query: 11  LLKAEKNPHTALALFD---SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI--- 64
           LLK   NP  A  +F    S+  E  +  S      I R L+  K+   +  +  LI   
Sbjct: 9   LLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSS 68

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA------GILCRKRQFEK 118
            IQK        LSV+  + K++  DKA   FQ +   F           +L      E+
Sbjct: 69  SIQKTKLSS--LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKER 126

Query: 119 AKRFLNSLWEK----GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
              F++ L++     G+ P  Y++  +I  L  S  +  A  +FDEM E+G + N   + 
Sbjct: 127 RVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           IL+ G+ K G   +  E+     ME+  V PN V YN +++  C+ GR D+  +M ++M+
Sbjct: 187 ILVRGYCKAGLTDKGLELLN--AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF----VDAVTYNAMIDGFCRA 289
           +     D  T+ S I  LCK G V  A R++ +M           +++TYN M+ GFC+ 
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +++   L+E +     L ++ SYNI ++GL+ +GK  EA ++ + + +K       ++
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +L++GLCK G L+ A  I+  ++  G                  G++  A SL+  M +
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           + C  NAYTCN L++   +  ++  A  L ++M+ KG     V+ N +++GLC      +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484

Query: 452 AYSFVKEM-----------------------LEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           A   VK M                       +E    PD+ITYS L+NGLC++ +   A 
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + + +   PD   YNI IH  C  GK+  A ++  +M+K+ C  +L TYN+L+ GL
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
                  +   + + + E+ + P+I +YN  ++ LC   ++ DA   L++ + + I P  
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664

Query: 609 ITWHILVRA 617
            ++  L+ A
Sbjct: 665 FSFKYLIEA 673



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 291/604 (48%), Gaps = 20/604 (3%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKA 92
           G A   + F+ ++R L D   V     + + +  + C   E     +++ Y K  + DK 
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 93  LDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           L++   M          I+       CR+ + + +++ +  + E+GL PD+ ++ + I+ 
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261

Query: 145 LVKSGDLLGALAVFDEM----FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           L K G +L A  +F +M    +      N + YN+++ GF K G    AK ++E  + E 
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES-IREN 320

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
               ++ +YN+ + GL + G+F E   +  +M         ++Y   + GLCK G +  A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           + +   M  +G+  DAVTY  ++ G+C  GK+     L + M R  CL N  + NIL+  
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L + G++ EA  +   + EK    D+ T  ++++GLC +G L+KAI+I+  +   G   L
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 380 ADAA-SLVNRMD----KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            +   S +  +D    ++ C  +  T ++L+NG  +A +   A  LF EM  +   P  V
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN  I+  CK  +   A+  +K+M +KG    + TY+ LI GL    +I     L  + 
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            +KG +P++  YN  I  LC   KVEDA  L   M ++N  PN+ ++  L++   K  D 
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D A E++   +    + + + Y++    L +  ++  A E L   L RG    T  +  L
Sbjct: 681 DMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739

Query: 615 VRAV 618
           V ++
Sbjct: 740 VESL 743



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 250/547 (45%), Gaps = 50/547 (9%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           A IL R +  E+ +   N +    + K  + S  +V++   KS  +  A   F  +  R 
Sbjct: 46  ARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRF 105

Query: 166 VET--NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            E   +V  YN+L++   K+        +++ +V+   + P   T+N++I  LC     D
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL-CGIAPQTYTFNLLIRALCDSSCVD 164

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              E++D M +   + + FT+   + G CKAG  +    +   M   G+  + V YN ++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN-- 340
             FCR G+  +  ++ E M  +G + ++V++N  I  L + GKV +A  I+  +      
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284

Query: 341 --CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                +S T+ +++ G CK G L  A  +   + E       D ASL             
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND-----DLASL------------- 326

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            + N  + G ++  K   A  + K+M+ KG  P++ SYN L++GLCK+    +A + V  
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  PD +TY  L++G C   K+D A  L  + ++    P+    NIL+H L   G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW----------------- 561
           + +A +L   M ++    + VT N ++DGL  +G+ DKA+EI                  
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 562 ------NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                 + ++E    PD+I+Y+  L GLC   R ++A     + +   + P ++ ++I +
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566

Query: 616 RAVMNNG 622
                 G
Sbjct: 567 HHFCKQG 573



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P+ VA ++ I  + K      A  V + M E  GC   +         L  K Q  +   
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIKNQIFEIHG 615

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            ++ + EKG+ P++ +Y T I  L +   +  A  + DEM ++ +  NV  +  LI+ F 
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K  D+  A+E++E  V        +  Y++M N L   G+  +  E+ + +     E  +
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGFELGT 733

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F Y   +  LCK   +E A  +  +M++ G   D      +IDG  + G  KE     + 
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793

Query: 302 M 302
           M
Sbjct: 794 M 794



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 9/181 (4%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSM 88
           +E G + +   ++  ++ L + + V   + +L+ + +QK   P   +   +I+A+ K   
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM-MQKNIAPNVFSFKYLIEAFCKVPD 679

Query: 89  PDKALDVFQRMNEIFGCEAGI-------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
            D A +VF+    I G + G+       L    Q  KA   L ++ ++G +   + Y  +
Sbjct: 680 FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +  L K  +L  A  +  +M +RG   +      +IDG  K G+   A    ++++   S
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799

Query: 202 V 202
           V
Sbjct: 800 V 800


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 255/491 (51%), Gaps = 20/491 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           E    PD +SY  VI GL +SG    AL VFDEM + GV  N + YN +IDG  K GD  
Sbjct: 187 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLE 246

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
               + ++++ +    PNVVTYNV+++GLC+ GR DE   + D M  +    D FTY   
Sbjct: 247 AGFRLRDQMLHDGP-KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             GL + G  +    ++ E ++ G+ + A T + +++G C+ GK+ +  +++E++   G 
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +   V YN LI G  +   +  A  I+E ++ ++   D  T+  LINGLCK       ++
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK-------LE 418

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++ + E+           LV  M+K G   +  T N+L++ +  A +LE    +  +M +
Sbjct: 419 MVTKAED-----------LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG    V+S+ +++   CK  +  EA + + +M+ K   P+   Y+ +I+   +S   + 
Sbjct: 468 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 527

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL L  +    G +  +  YN+L+ GLC + ++++A +L   ++ +   P++V+YNT++ 
Sbjct: 528 ALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIIS 587

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
                GD DKALE+   + +  +RP + + +  +  L S  R+ D        L + + P
Sbjct: 588 ACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEP 647

Query: 607 TTITWHILVRA 617
           ++  + I+V A
Sbjct: 648 SSSIYGIMVDA 658



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 230/469 (49%), Gaps = 21/469 (4%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+L++     G +   +  +  LV      P+   +N ++      G  D  L M  RM 
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLV-AAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMG 184

Query: 234 KNE--REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++E     D+F+Y   I GL ++G    A +V+ EMV+ G+  + +TYN MIDG  + G 
Sbjct: 185 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGD 244

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++  F L + M   G   NVV+YN+L+ GL   G++DE  ++ + +   +   D  T+ +
Sbjct: 245 LEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSI 304

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L +GL + G     + +  E  + G                 +G++A A  +   +   G
Sbjct: 305 LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                   N+L+NG+ Q   L  A  +F++M  +   P  ++YN LINGLCK+E   +A 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             V EM + G  P + T++ LI+    + +++    +     QKG   DV  +  ++   
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  GK+ +A+ +  +M  ++  PN   YN+++D   ++GD ++AL +   +    +   I
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++YN+ LKGLC  S++ +A E +     +G+ P  ++++ ++ A  N G
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 239/509 (46%), Gaps = 19/509 (3%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P + S   ++  L+  G      A F  +   G   +   +N ++      GD   A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 193 WERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
             R+   E +  P+  +YNV+I GL + G+  + L+++D M       +  TY + I G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
            K G++E   R+  +M+  G   + VTYN ++ G CR G++ E   L + M     L + 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +Y+IL  GL   G+    +S++    +K     + T  +L+NGLCK+G + KA Q+   
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 371 VEEGG----------------EGR-LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           +   G                + R L  A  +  +M     + +  T N+L+NG  +   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +  A  L  EM + G  P+V ++NTLI+      +  + ++ + +M +KG K D+I++  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           ++   C++ KI  A+ +    + K   P+  +YN +I     +G  E AL L   MK   
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              ++VTYN L+ GL ++   D+A E+   +  + LRPD++SYN  +   C+      A 
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           E L +    GI PT  T H LV A+ + G
Sbjct: 600 ELLQEMNKYGIRPTLRTCHTLVSALASAG 628



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 207/413 (50%), Gaps = 19/413 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++ +  ++ +    + PD ++Y  + +GL ++G+    L++F E  ++GV   
Sbjct: 274 LCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG 333

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G   +AK+++E LV  T + P  V YN +ING C+         ++
Sbjct: 334 AYTCSILLNGLCKDGKVAKAKQVFEMLV-HTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++MK      D  TY + I+GLCK   V  AE +  EM +SG+     T+N +ID +  A
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M +KG   +V+S+  +++   +NGK+ EA++I + +  K+   ++  +
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +I+   ++G   +A+ ++ +++  G                   ++ +A  L+  +  
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  + N++++        + A+ L +EM++ G  PT+ + +TL++ L    R  +
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHD 632

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                ++ML K  +P    Y ++++   + +       L  +  +KG   D T
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 2/196 (1%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++ S N L+  L  V R  +  +    ++  G +PD   ++ ++     +  +D+AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 491 CCQF--LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             +    +    PD   YN++I GL  +GK  DAL+++  M      PN +TYNT++DG 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD +    + + +L +  +P++++YN+ L GLC   RM +    +++     +LP  
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 609 ITWHILVRAVMNNGAS 624
            T+ IL   +   G S
Sbjct: 300 FTYSILFDGLTRTGES 315


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 263/547 (48%), Gaps = 56/547 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  Q E A+R   ++    + P+ Y+Y  V+  L   G +  ALAV DEM  RG     
Sbjct: 138 CRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP 194

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL---------------------------------- 196
             Y+++++   + G +  A  + E L                                  
Sbjct: 195 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 254

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      P+VV+YN ++ GLC   R+    E+ + M +     +  T+ + I  LC+ G 
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 314

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E    V  +MVE G   D   Y  +IDG C+ G ++   E+   M   G   NVV YN 
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L++GL    + +E   +   + +K+C  D  T  +L++  C+NG +++ I++L +     
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ----- 429

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M +HGC  +  T  +++NGF +   ++ A+ L K M+  GC P  +S
Sbjct: 430 -------------MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 476

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  ++ GLC  ER+ +A   + +M+++G   + IT++ LIN LC+   ++ A++L  Q L
Sbjct: 477 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 536

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G +PD+  Y+ +I GL  AGK ++AL+L + M  +   PN + Y+++   L + G  +
Sbjct: 537 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 596

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           K ++++++I +  +R D + YN  +  LC       A EFL   +  G +P   T+ IL+
Sbjct: 597 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656

Query: 616 RAVMNNG 622
           R + + G
Sbjct: 657 RGLASEG 663



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 253/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  A R L  L  +G   DV +   V+N +   G +  AL +  ++   G E +V
Sbjct: 205 CRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDV 264

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ E +V   +  PN+VT+N +I+ LC+ G F+   E+  
Sbjct: 265 VSYNAVLKGLCMAKRWGCVQELMEEMV-RMACPPNIVTFNTLISYLCRNGLFERVHEVLA 323

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 324 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 383

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E  EL   M  K C L+ V++NIL+    +NG VD  I + E + E  C  D  T+ 
Sbjct: 384 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 443

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 444 TVINGFCKEGLIDEAVMLLKS------------------MTACGCKPNTISYTIVLKGLC 485

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC    +++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K D AL+L    + KG +P+  +Y+ +   L   G++   +Q++ N+
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +      + V YN ++  L K G+ ++A+E   +++     P+  +Y I ++GL S   +
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L +   +G L   +  H
Sbjct: 666 KEAQEMLTELCSKGALRKHLMKH 688



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 209/467 (44%), Gaps = 56/467 (11%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN M+ G C+ G+ +    +   +       +++TY   +  LC  G +  A  V  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPV---PPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             G       Y+ +++  CR G  +    + E +  +GC L+V + N+++  + + G VD
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 328 EAISIWELLREKNCNADSTTHGVLING--------------------------------- 354
           EA+ +   L    C  D  ++  ++ G                                 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 355 --LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
             LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  +G K
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    N+L+ G   A + E    L  EM  K C    V++N L++  C+          
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           +++MLE G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ GLCS
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           A +  DA  L S M ++ C  N +T+NTL++ L K G  ++A+E+   +L     PD+IS
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y+  + GL    +  +A E LN  + +G+ P TI +  +  A+   G
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E  S    S I  LC AG    A R              V YNAM+ G+CRAG+++    
Sbjct: 92  EGGSVRLSSLIRSLCAAGRTAEAARALSAAGGG---AGVVAYNAMVAGYCRAGQLESARR 148

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           L   +      N  +Y  ++R L   G++ +A+++ + +  + C      + V++   C+
Sbjct: 149 LAAAVPVPP--NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 206

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
            G    A+++L ++   G                 +G + +A  L+  +   GC+ +  +
Sbjct: 207 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 266

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+++ G   A +      L +EM R  C P +V++NTLI+ LC+   F   +  + +M+
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 326

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G  PD+  Y+ +I+G+C+   +++A ++  +    G  P+V  YN L+ GLCSA + E
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 386

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +  +L + M  ++C  + VT+N L+D   + G  D+ +E+   +LE    PD+I+Y   +
Sbjct: 387 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 446

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            G C    + +A   L      G  P TI++ I+++ +
Sbjct: 447 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 2/270 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    ++    L  + E G  PDV +Y TVING  K G +  A+ +   M   G + N
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y I++ G      ++ A+++  +++ +     N +T+N +IN LCK G  ++ +E+ 
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFNTLINFLCKKGLVEQAIELL 532

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  N    D  +Y + I GL KAG  + A  +   MV  G+  + + Y+++     R 
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 592

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I +  ++++ +       + V YN +I  L + G+ + AI     +    C  + +T+
Sbjct: 593 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 652

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            +LI GL   G++ +A ++L E+   G  R
Sbjct: 653 TILIRGLASEGFVKEAQEMLTELCSKGALR 682



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 3/118 (2%)

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN ++ G C AG++E A +L + +      PN  TY  ++  L   G    AL + + + 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
                P    Y++ L+  C       A   L D   RG        ++++ A+ + G+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 296/622 (47%), Gaps = 44/622 (7%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-ELIEIQKCYCPED 74
           +  + AL LF S +R    A +P L+  I+  L   KL      ++ +LI+  +      
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSR 107

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
           +  SV     +        +VF  +   F  E G++      E+A   L   ++  + P 
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFS-EMGLV------EEA---LWVYYKMDVLPA 157

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           + +   V++GLVK G       V+ +M  RG   NVV Y  LIDG  ++GD+++A  +++
Sbjct: 158 MQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            ++ E  ++P VV Y ++I GLC   R  E   M+  M+ +    + +TY + + G CK 
Sbjct: 218 EMI-EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
            +V+ A  +Y EM+  G+  + VT+  +IDG C+  ++    +    M   G + N+  Y
Sbjct: 277 AHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + G + EA+S+   + +     D  T+ +LI GLC                 
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC----------------- 379

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G  R+ +A  L+  M K G   NA T N+L++G+ +   +E AI +  +M+ KG  P +
Sbjct: 380 -GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++++TLI+G CK  +   A     EM+ KG  PD++ Y+ LI+G  +      A +L  +
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY-------------SNMKKRNCVPNLVT 540
             + G  P+V   + LI GLC  G++ DA++L+             + + +  C PN V 
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ GL   G   KA + ++ +    LRPD+ +  + ++G      + D      D L
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618

Query: 601 CRGILPTTITWHILVRAVMNNG 622
             GI+P +  + +L +    +G
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESG 640



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 165/766 (21%), Positives = 304/766 (39%), Gaps = 159/766 (20%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
           A  N  T   L D   R+  +  +  LF  ++ + I P +V++   I  L    +    E
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAE 248

Query: 74  DVALSVIQA------YGKNSMPD---------KALDVFQRM-------NEI-FGCEAGIL 110
            +  ++  +      Y  N+M D         KAL+++  M       N + FG     L
Sbjct: 249 SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGL 308

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV------------- 157
           C+  +   A++FL  +   G+ P+++ Y  +I+G  K+G+L  AL++             
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368

Query: 158 ----------------------FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
                                   EM ++G   N V YN LIDG+ K+G+  +A E+  +
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  E  + PN++T++ +I+G CK G+ +  + ++  M       D   Y + I G  K G
Sbjct: 429 MT-EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW------EVMGRKG--- 306
           N + A R+++EM E+G+  +  T + +IDG C+ G+I +  +L+      +  G K    
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 307 -----CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
                  N V Y  LI+GL  +G++ +A   +  +R      D  T  V+I G  +  +L
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHL 607

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASL----VNRMDKHGCK-LNAY 399
              + +  ++ + G                  G L  A S     V  +D+   +   +Y
Sbjct: 608 RDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSY 667

Query: 400 TCNSLM------------NGFIQASKLENAIFL-FKEMSRKGCSPTVVSYNTLINGLCKV 446
           T  S              + ++ A  + + + L +     K  SP  +       G    
Sbjct: 668 TIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGD 727

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP----- 501
           +R  +A    ++M     +PD++T ++ ++       +DM   +      +G        
Sbjct: 728 QRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLN 787

Query: 502 --------------------------DVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-- 533
                                     DVT +  +I G    G+ E+ALQL++ MK+ N  
Sbjct: 788 NSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 847

Query: 534 --------------CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNI 578
                          +PN VT+  ++      G  ++  + +  + E+  LRP I  +  
Sbjct: 848 ARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 907

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            +  LC    +++A+EF+   L   + P  + W  L+ A    G S
Sbjct: 908 MVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGACSLQGDS 950



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 124/312 (39%), Gaps = 37/312 (11%)

Query: 118  KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            KA +    +     +PD+ +    ++     G L     +   +  RG++T++   N LI
Sbjct: 732  KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791

Query: 178  DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK---- 233
            + + K G+   A+ +++      +   +V T+  MI G    G+ +E L+++  MK    
Sbjct: 792  NMYSKCGEIGTARRLFD-----GTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 234  ---KNERE---------KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT-YN 280
               KN+R           +  T+   +     AG VE  ++ +R M E       ++ + 
Sbjct: 847  RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 281  AMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLL----ENGKVDEAISIWELL 336
             M+D  CRAG + E +E    M  +   N V +  L+         NG  +  I I    
Sbjct: 907  CMVDLLCRAGLLTEAYEFILKMPVRP--NAVVWRTLLGACSLQGDSNGNGNSNIKIXSEA 964

Query: 337  REKNCNADSTTHG---VLINGLCKNGYLNKAIQILNEVEEGGEGRLA------DAASLVN 387
            R +    + +  G   ++ N     G  +K + + N++++  +   +      D    V 
Sbjct: 965  RRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVA 1024

Query: 388  RMDKHGCKLNAY 399
              D+H C    Y
Sbjct: 1025 ADDQHPCMPQIY 1036


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 248/482 (51%), Gaps = 30/482 (6%)

Query: 110 LCRKRQFEKAKRFLNS-------LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           LC +R  +KA  + NS       L+E    PD  +Y  +++GL K+G+    L  +++M 
Sbjct: 74  LCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMV 133

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
               E  ++ Y +L+DG  K     RA +++E ++ +    P+++ Y+ +I+GL K GR 
Sbjct: 134 ASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH-KPDIIAYSSLIDGLSKAGRV 192

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           DE  ++ D M        +  Y S + GLCK G ++ A +  +EM    +     TY+ +
Sbjct: 193 DEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFI 252

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           + G+   GK++E F + E M  + C  + +SY + I  L   G+ +EA  ++E + EK C
Sbjct: 253 VTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGC 312

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+G++I+  CK                  EG +A A  ++  MDK   K N Y  
Sbjct: 313 KPDMHTYGIIIDNFCK------------------EGSMAAATHVLRLMDKAAVKPNRYIY 354

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             +M+GF+++S+LE A+ L++ + + G  P+ V+YNT+IN LCK+++  EA   ++EM  
Sbjct: 355 TMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQR 414

Query: 462 KG--WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +    +P ++TYS++I+GL +    + A  L  + +  G  PD   Y  LI  L  AGKV
Sbjct: 415 RKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKV 474

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
             A++L   M K    P+  TY TL+  L ++ D D A ++   ++     P+  ++   
Sbjct: 475 SRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533

Query: 580 LK 581
            K
Sbjct: 534 EK 535



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 246/496 (49%), Gaps = 38/496 (7%)

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           +++  LV+ G L  AL  F        E NV  +NIL+ GF  + D+    E+   L+ E
Sbjct: 2   SLLLALVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDF----EVVNALLRE 54

Query: 200 T---SVYPNVVTYNVMINGLCKCGRFDECLEMWD-------RMKKNEREKDSFTYCSFIH 249
                +  N  T+ V+++ LC     D+ +  ++       R+ +     DS TY + + 
Sbjct: 55  MKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVD 114

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GL KAGN +     Y +MV S      +TY  ++DG C+A K++   +++E M RKG   
Sbjct: 115 GLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP 174

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++++Y+ LI GL + G+VDEA  + +L+  +     +  +  ++ GLCK G + +A++ +
Sbjct: 175 DIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 234

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+         D  S +                  + G+I   K+E A  + +EM+ + 
Sbjct: 235 QEMRRRRLRPRVDTYSFI------------------VTGYIGMGKVEEAFAVMEEMADRD 276

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C+P  +SY   I  L  + R  EA    + M+EKG KPDM TY ++I+  C+   +  A 
Sbjct: 277 CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAAT 336

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +     +    P+  +Y +++ G   + ++E+AL+LY  + K   +P+ VTYNT+++ L
Sbjct: 337 HVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINAL 396

Query: 549 FKTGDCDKALEIWNHIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            K    D+ALE+   +   +E L P I++Y++ + GL        AF+ L + +  G++P
Sbjct: 397 CKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP 456

Query: 607 TTITWHILVRAVMNNG 622
              T+  L++ +   G
Sbjct: 457 DCFTYTSLIQTLAGAG 472



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 206/455 (45%), Gaps = 35/455 (7%)

Query: 59  RILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------- 110
           R+ E IE      P+ V  + ++    K    D  L+ +++M     CE  +L       
Sbjct: 96  RLFEAIE-----APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVA-SKCEPTLLTYTVLVD 149

Query: 111 --CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
             C+  + E+A      +  KG KPD+ +Y ++I+GL K+G +  A  + D M  RG   
Sbjct: 150 GLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPP 209

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             V Y  ++ G  K G    A +  + +         V TY+ ++ G    G+ +E   +
Sbjct: 210 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRP-RVDTYSFIVTGYIGMGKVEEAFAV 268

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + M   +   D+ +Y  FI  L   G  E AE+V+  MVE G   D  TY  +ID FC+
Sbjct: 269 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCK 328

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G +     +  +M +     N   Y +++ G +++ +++EA+ +++ + +      + T
Sbjct: 329 EGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVT 388

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  +IN LCK   +++A+++L E++                  K   + +  T + +++G
Sbjct: 389 YNTVINALCKLKKMDEALELLREMQR----------------RKEELEPSIVTYSMIIHG 432

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +    E A  L  EM   G  P   +Y +LI  L    +   A   ++EML+ G  PD
Sbjct: 433 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 492

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
             TY  L+  LC+S  +D A  L  + ++ G TP+
Sbjct: 493 DHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPN 526



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 180/409 (44%), Gaps = 83/409 (20%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           N+++    R G++ +    ++    +   NV S+NIL+RG       +   ++   ++ +
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISEP--NVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
              ++  THGV+++ LC    L+KA+   N        R  +A  L   ++      ++ 
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFN-------SRTEEACRLFEAIEAP----DSV 107

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  ++++G  +A   +  +  +++M    C PT+++Y  L++GLCK  +   A    +EM
Sbjct: 108 TYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEM 167

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC----- 514
           + KG KPD+I YS LI+GL ++ ++D A KL    + +G  P    Y  ++ GLC     
Sbjct: 168 IRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRI 227

Query: 515 ------------------------------SAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                                           GKVE+A  +   M  R+C P+ ++Y   
Sbjct: 228 QEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMF 287

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC-------------------- 584
           ++ L+  G  ++A +++  ++E+  +PD+ +Y I +   C                    
Sbjct: 288 IEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAV 347

Query: 585 ---------------SCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
                            SR+ +A E     L  GILP+T+T++ ++ A+
Sbjct: 348 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINAL 396


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 288/568 (50%), Gaps = 32/568 (5%)

Query: 80   IQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGL 131
            I  YGK+    KA+  F++M        I  C A +  L  + + E+AK F N L + GL
Sbjct: 444  IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503

Query: 132  KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             PD  +Y  ++    K+G +  A+ +  EM E G +  VV  N LID  +K      A +
Sbjct: 504  APDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWK 563

Query: 192  IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
            +++R+  E  + P VVTYN ++ GL K GR  E   ++  M  ++   ++ ++ + +  L
Sbjct: 564  MFQRM-KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622

Query: 252  CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV 311
            CK G V+ A ++   M E   F D +TYN +I G  +  ++   F L+  M +    + V
Sbjct: 623  CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYV 682

Query: 312  SYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ---- 366
            +   L+ G++++G++++A  +  E +     +AD +    L+ G+     + ++I     
Sbjct: 683  TLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAES 742

Query: 367  -ILNEVEEGG------------EGRLADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQ 410
             + N + E               G+  DA ++  ++ K  C    L AY  NSL++G ++
Sbjct: 743  LVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAY--NSLIDGLLK 800

Query: 411  ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            A   E A  LF +M   GC+P V +YN  ++ L K  +  E +   +EML +G KP+ IT
Sbjct: 801  ARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 471  YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            ++++I GL +S  +D A+ L    +   F+P    Y  LI GL   G++E+A Q +  M 
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920

Query: 531  KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
               C+PN   YN LM+G  K GD + A E++  +++E +RPD+ SY+I +  LC   ++ 
Sbjct: 921  DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980

Query: 591  DAFEFLNDALCRGILPTTITWHILVRAV 618
            DA  +  +    G+ P  + +++++  +
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGL 1008



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 288/601 (47%), Gaps = 70/601 (11%)

Query: 66   IQKC-YCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKR 114
            ++KC   P+ +  +++ + YGK    D A+ +   M E  GC+  +         L +  
Sbjct: 498  LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE-NGCDPEVVIINSLIDTLYKAD 556

Query: 115  QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            + ++A +    + E  L P V +Y T++ GL K G +  A A+F  M       N + +N
Sbjct: 557  RVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFN 616

Query: 175  ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
             L+D   K G+   A ++  R+  E + +P+V+TYN +I GL K  R +    ++ +MKK
Sbjct: 617  TLLDCLCKNGEVDLALKMLFRMT-EMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK 675

Query: 235  NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-------------------------- 268
                 D  T C+ + G+ K G +E A RV +E V                          
Sbjct: 676  -VIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIG 734

Query: 269  ESGIFVDAVTYNA----------MIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
            +S +F +++  N           ++   C+ GK  + + ++  + +  C+  ++ +YN L
Sbjct: 735  QSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSL 794

Query: 317  IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
            I GLL+    + A  ++  ++   C  D  T+ + ++ L                  G  
Sbjct: 795  IDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDAL------------------GKS 836

Query: 377  GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            G++ +   L   M   GCK N  T N ++ G ++++ L+ AI L+ ++     SPT  +Y
Sbjct: 837  GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTY 896

Query: 437  NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
              LI+GL K+ R  EA  F +EML+ G  P+   Y++L+NG  +   ++ A +L  + ++
Sbjct: 897  GPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVK 956

Query: 497  KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            +G  PD+  Y+I++  LC  GKV+DAL  +  +K     P+LV YN +++GL ++   ++
Sbjct: 957  EGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEE 1016

Query: 557  ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            AL +++ +    + PD+ +YN  +  L     + +A +   +   +G+ P   T++ L+R
Sbjct: 1017 ALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIR 1076

Query: 617  A 617
             
Sbjct: 1077 G 1077



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 287/620 (46%), Gaps = 49/620 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            +S++ +  +LK+  +P+ A + F+S    P   H+    +++L  L   + V  +  + 
Sbjct: 86  TMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVF 145

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
            L++ Q       +    I  Y         L +F+           +L  +    +A  
Sbjct: 146 NLMQKQ-------IIKRSINTY---------LTIFK-----------VLYIRGGLREAPV 178

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  + + G   + YSY  +I+ L+KSG    AL V+  M   G++ ++  Y+ L+    
Sbjct: 179 ALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALG 238

Query: 182 KKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           K+ D      + +   ME+  + PN+ T+ + I  L + G+ DE   +  RM       D
Sbjct: 239 KRRDIETVMGLLQE--MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPD 296

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   I  LC AG +  A+ ++ +M  S    D VTY  ++D F   G +    E W 
Sbjct: 297 VVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWS 356

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M   G L +VV++ ILI  L + GKVDEA    ++++++    +  T+  LI GL +  
Sbjct: 357 EMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR-- 414

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                   LN        RL +A  L N M+  G +  AYT    ++ + ++ +   AI 
Sbjct: 415 --------LN--------RLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F++M   G  P +V+ N  +  L +  R  EA  F   + + G  PD ITY++L+    
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ ++D A+KL  +  + G  P+V + N LI  L  A +V++A +++  MK+    P +V
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNTL+ GL K G   +A  ++  ++ +   P+ IS+N  L  LC    +  A + L   
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM 638

Query: 600 LCRGILPTTITWHILVRAVM 619
                 P  +T++ ++  ++
Sbjct: 639 TEMNCFPDVLTYNTVIYGLI 658



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/504 (29%), Positives = 253/504 (50%), Gaps = 56/504 (11%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  + + A + L  + E    PDV +Y TVI GL+K   +  A  +F +M ++ +  +
Sbjct: 622  LCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPD 680

Query: 170  VVCYNILIDGFFKKG---DYMR-AKEI------------WERL---------VMETSVYP 204
             V    L+ G  K G   D  R AKE             WE L         + ++ ++ 
Sbjct: 681  YVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFA 740

Query: 205  NVVTYNV----------MINGLCKCGRFDECLEMWDRMKKNEREKDSF-TYCSFIHGLCK 253
              +  N           ++  LCK G+  +   ++ ++ K+     S   Y S I GL K
Sbjct: 741  ESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK 800

Query: 254  AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            A   E A  ++ +M  +G   D  TYN  +D   ++GKIKE F+L+E M  +GC  N ++
Sbjct: 801  ARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
            +NI+I GL+++  +D+AI ++  L   + +    T+G LI+GL K G L +A Q   E  
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEE-- 918

Query: 373  EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                            M  +GC  N    N LMNGF +   +E A  LF+ M ++G  P 
Sbjct: 919  ----------------MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962

Query: 433  VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            + SY+ +++ LC V +  +A  + +E+   G  PD++ Y+L+INGL +S++++ AL L  
Sbjct: 963  LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022

Query: 493  QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            +   +G TPD+  YN LI  L  AG VE+A ++Y  ++ +   PN+ TYN L+ G   +G
Sbjct: 1023 EMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082

Query: 553  DCDKALEIWNHILEERLRPDIISY 576
            + D+A  ++  ++    RP+  ++
Sbjct: 1083 NPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 265/517 (51%), Gaps = 23/517 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L+ + ++G+ P++++Y T+I GL++   L  AL +F+ M   G+ET 
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y + ID + K G+  +A + +E++     + PN+V  N  +  L + GR +E  E +
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKM-KTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + +KK     D+ TY   +    KAG V+ A ++  EM E+G   + V  N++ID   +A
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKA 555

Query: 290 GKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E +++++ M   K    VV+YN L+ GL + G+V EA ++++ +   +C  ++ + 
Sbjct: 556 DRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISF 615

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L++ LCKNG ++ A+++L                   RM +  C  +  T N+++ G 
Sbjct: 616 NTLLDCLCKNGEVDLALKMLF------------------RMTEMNCFPDVLTYNTVIYGL 657

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKPD 467
           I+ +++  A +LF +M +K   P  V+  TL+ G+ K  R  +A+   KE +   G   D
Sbjct: 658 IKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHAD 716

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              +  L+ G+    +I  ++      +      D ++   L+  LC  GK  DA  ++ 
Sbjct: 717 GSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL 776

Query: 528 NMKKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            + K  C+ P+L  YN+L+DGL K    + A  ++  +      PD+ +YN+ L  L   
Sbjct: 777 KLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            ++ + F+   + L RG  P TIT +I++  ++ + +
Sbjct: 837 GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 235/510 (46%), Gaps = 20/510 (3%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+ E      N + ++ +K  + +Y T+   L   G L  A    ++M + G   N   Y
Sbjct: 136 RRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSY 195

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI    K G    A +++ R+V E  + P++ TY+ ++  L K    +  + +   M+
Sbjct: 196 IGLIHLLLKSGFCREALKVYRRMVSE-GIKPSLKTYSALMVALGKRRDIETVMGLLQEME 254

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 + +T+   I  L +AG ++ A  + + M ++G   D VTY  +ID  C AGK+ 
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314

Query: 294 ECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
              EL+  M       + V+Y  L+    ++G +D     W  +       D  T  +LI
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILI 374

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           + LCK G +++A   L+                   M K G   N +T N+L+ G ++ +
Sbjct: 375 DALCKVGKVDEAFGTLD------------------VMKKQGVAPNLHTYNTLICGLLRLN 416

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +L+ A+ LF  M   G   T  +Y   I+   K    G+A    ++M   G  P+++  +
Sbjct: 417 RLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACN 476

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
             +  L +  +++ A +      + G  PD   YNIL+     AG+V+DA++L S M++ 
Sbjct: 477 ASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            C P +V  N+L+D L+K    D+A +++  + E +L P +++YN  L GL    R+ +A
Sbjct: 537 GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
                  +     P TI+++ L+  +  NG
Sbjct: 597 TALFKGMIADDCPPNTISFNTLLDCLCKNG 626



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 20/347 (5%)

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            + P + +Y ++I+GL+K+     A  +F +M   G   +V  YN+ +D   K G      
Sbjct: 784  ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +++E ++      PN +T+N++I GL K    D+ ++++  +   +     +TY   I G
Sbjct: 844  DLYEEMLFR-GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902

Query: 251  LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            L K G +E A++ + EM++ G   +   YN +++GF + G ++   EL+  M ++G   +
Sbjct: 903  LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962

Query: 310  VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            + SY+I++  L   GKVD+A+  +E L+    + D   + ++INGL              
Sbjct: 963  LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL-------------- 1008

Query: 370  EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                G   R+ +A SL + M   G   + YT N+L+     A  +E A  +++E+  KG 
Sbjct: 1009 ----GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGL 1064

Query: 430  SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
             P V +YN LI G         AY+  K+M+  G +P+  T++ L N
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 102/223 (45%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TCN ++       ++E+ + +F  M ++    ++ +Y T+   L       EA   +++M
Sbjct: 124 TCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKM 183

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            + G+  +  +Y  LI+ L +S     ALK+  + + +G  P +  Y+ L+  L     +
Sbjct: 184 RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDI 243

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E  + L   M+     PN+ T+   +  L + G  D+A  I   + +    PD+++Y + 
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVL 303

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  LC+  ++++A E           P  +T+  L+    ++G
Sbjct: 304 IDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHG 346


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 285/552 (51%), Gaps = 27/552 (4%)

Query: 90  DKALDVFQRMNEIFGCEAGI----LC----RKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           + A+D+F+ M +       I    LC    R +Q++    F   +   G++ D+Y+   +
Sbjct: 81  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 140

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   LL A +V    ++ G E + + ++ L++GF  +G    A  + +R+V E  
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-EMK 199

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P++VT + +INGLC  GR  E L + DRM +   + D  TY   ++ LCK+GN   A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++R+M E  I    V Y+ +ID  C+ G   +   L+  M  KG   +VV+Y+ LI GL
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
             +GK D+   +   +  +N   D  T   LI+   K G L +A ++ NE+   G     
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       E  L +A  + + M   GC+ +  T + L+N + +A ++++ + LF+E
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +S KG  P  ++YNTL+ G C+  +   A    +EM+ +G  P ++TY +L++GLC + +
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ++ AL++  +  +   T  + +YNI+IHG+C+A KV+DA  L+ ++  +   P++VTYN 
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++ GL K G   +A  ++  + E+   PD  +YNI ++     S +  + E + +    G
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 619

Query: 604 ILPTTITWHILV 615
               + T  +++
Sbjct: 620 FSADSSTIKMVI 631



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 243/460 (52%), Gaps = 20/460 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+E ++    I+I+ + +K   + A  +  R   +    P+ +T++ ++NG C  GR  E
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR-AWKLGYEPDTITFSTLVNGFCLEGRVSE 187

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            + + DRM + ++  D  T  + I+GLC  G V  A  +   MVE G   D VTY  +++
Sbjct: 188 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 247

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C++G      +L+  M  +    +VV Y+I+I  L ++G  D+A+S++  +  K   A
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  LI GLC                   +G+  D A ++  M       +  T ++
Sbjct: 308 DVVTYSSLIGGLCN------------------DGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++ F++  KL  A  L+ EM  +G +P  ++YN+LI+G CK     EA      M+ KG
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            +PD++TYS+LIN  C++K++D  ++L  +   KG  P+   YN L+ G C +GK+  A 
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+  M  R   P++VTY  L+DGL   G+ +KALEI+  + + R+   I  YNI + G+
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C+ S++ DA+        +G+ P  +T+++++  +   G+
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 31/439 (7%)

Query: 56  HVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFG 104
            VS  L LI+  ++  + P++V    V+    K+     ALD+F++M E         + 
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 278

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+   F+ A    N +  KG+K DV +Y ++I GL   G       +  EM  R
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            +  +VV ++ LID F K+G  + AKE++  ++    + P+ +TYN +I+G CK     E
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHE 397

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             +M+D M     E D  TY   I+  CKA  V+   R++RE+   G+  + +TYN ++ 
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           GFC++GK+    EL++ M  +G   +VV+Y IL+ GL +NG++++A+ I+E +++     
Sbjct: 458 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
               + ++I+G+C                     ++ DA SL   +   G K +  T N 
Sbjct: 518 GIGIYNIIIHGMCN------------------ASKVDDAWSLFCSLSDKGVKPDVVTYNV 559

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++ G  +   L  A  LF++M   GC+P   +YN LI           +   ++EM   G
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 619

Query: 464 WKPDMITYSLLINGLCQSK 482
           +  D  T  ++I+ L   +
Sbjct: 620 FSADSSTIKMVIDMLSDRR 638



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 129/234 (55%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M+ +G + + YT   ++N + +  KL  A  +     + G  P  ++++TL+NG C   R
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA + V  M+E   +PD++T S LINGLC   ++  AL L  + ++ GF PD   Y  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +++ LC +G    AL L+  M++RN   ++V Y+ ++D L K G  D AL ++N +  + 
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ D+++Y+  + GLC+  +  D  + L + + R I+P  +T+  L+   +  G
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 358



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ DA  L   M +          N L +   +  + +  +   K M   G    + +  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +IN  C+ ++   A+S +    + G++PD IT+S L+NG C   ++  A+ L  + ++ 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              PD+   + LI+GLC  G+V +AL L   M +    P+ VTY  +++ L K+G+   A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L+++  + E  ++  ++ Y+I +  LC      DA    N+   +GI    +T+  L+  
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 618 VMNNG 622
           + N+G
Sbjct: 319 LCNDG 323



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L NG +   K+ +AI LF+ M +    PT + +N L + + + +++     F K M   G
Sbjct: 71  LRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 129

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + DM T +++IN  C+ KK+  A  +  +  + G+ PD   ++ L++G C  G+V +A+
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M +    P+LVT +TL++GL   G   +AL + + ++E   +PD ++Y   L  L
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C     + A +       R I  + + + I++ ++  +G+
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 125/308 (40%), Gaps = 64/308 (20%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T  AL D   +E     +  L++ ++ R I P  + + S I         +C E+     
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI-------DGFCKENCLHEA 398

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG 130
            Q +  + M  K            GCE  I+         C+ ++ +   R    +  KG
Sbjct: 399 NQMF--DLMVSK------------GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P+  +Y T++ G  +SG L  A  +F EM  RGV  +VV Y IL+DG    G+  +A 
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504

Query: 191 EIWERL----------------------------------VMETSVYPNVVTYNVMINGL 216
           EI+E++                                  + +  V P+VVTYNVMI GL
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G   E   ++ +MK++    D FTY   I        +  +  +  EM   G   D+
Sbjct: 565 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 624

Query: 277 VTYNAMID 284
            T   +ID
Sbjct: 625 STIKMVID 632


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 288/603 (47%), Gaps = 61/603 (10%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLW 127
           ++ I+AY +      A+D F+RM ++F C             L      ++A +    + 
Sbjct: 57  VASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 128 EKGLKPDVYS-------------------------------YGTVINGLVKSGDLLGALA 156
             G+ PD+++                               Y TV+ GL   G    A  
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +FD+M    V  N+  +N ++    K+GD + A  +  + V++  +  N+ TYN+ I GL
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGK-VIQRGMSINLFTYNIWIRGL 234

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ GR  E + + D M+      D  TY + I GLCK    + A    R M+  G   D 
Sbjct: 235 CEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
            TYN +IDG+C+   ++E  EL +    KG + + V+Y  LI GL   G V+ A+ ++  
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
            + K    D   +  L+ GLC  G +  A+Q++NE+ E G                  G 
Sbjct: 354 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 413

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           ++DA  ++N     G   + +T N+L++G+ +  KL++A+ L + M   G +P  ++YN+
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           ++NGLCK  +  E     +EM+ KG  P+ ITY++LI   C+S K++ A K+  +  Q+G
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   +N LI+G C  G +E A  L+  ++++       T+NTL+       +   A 
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 593

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +I++ +L +  R D  +Y + + G C  + +  A+  L + + +G +P+  T+  ++ ++
Sbjct: 594 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 653

Query: 619 MNN 621
             N
Sbjct: 654 TVN 656



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 249/509 (48%), Gaps = 20/509 (3%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A++  + +    + P++ ++  V++ L K GD+L A  +  ++ +RG+  N+  YNI I 
Sbjct: 173 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  + G    A  + +   M     P+VVTYN +I GLCK     E +    RM      
Sbjct: 233 GLCEAGRLPEAVRLVDG--MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D FTY + I G CK   V+ A  + ++ V  G   D VTY ++I+G C  G ++   EL
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +     KG   ++V YN L++GL   G +  A+ +   + E+ C+ D  T+ ++INGLCK
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 358 NGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNAYT 400
            G ++ A  ++N+    G            +G     +L  A  LV RM ++G   +  T
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            NS++NG  +A K+      F+EM  KGC P  ++YN LI   C+  +  EA   + +M 
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++G  PD ++++ LI G C++  ++ A  L  +  +KG++     +N LI        + 
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A +++  M  +    +  TY  L+DG  KT + D+A      ++++   P + ++   +
Sbjct: 591 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 650

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTI 609
             L    R+  A   ++  +  G++P  +
Sbjct: 651 NSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 237/479 (49%), Gaps = 25/479 (5%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y   I    ++G L  A+  F+ M           YN ++D       + +A +++ R+ 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM- 114

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   V P++ T+ + +   C   R    L    R+ +    + +  YC+ + GL   G+ 
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIAL----RLLRALPHRGAVAYCTVVCGLYAHGHT 170

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNIL 316
             A +++ +M+ + +F +   +N ++   C+ G + E    L +V+ R   +N+ +YNI 
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           IRGL E G++ EA+ + + +R      D  T+  LI GLCK     +A+  L        
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR------- 282

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                      RM   GC  + +T N++++G+ + S ++ A  L K+   KG  P  V+Y
Sbjct: 283 -----------RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            +LINGLC       A     E   KG KPD++ Y+ L+ GLC    I  AL++  +  +
Sbjct: 332 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  PD+  YNI+I+GLC  G + DA  + ++   +  +P++ T+NTL+DG  K    D 
Sbjct: 392 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 451

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           AL++   + E  + PD I+YN  L GLC   ++++  E   + + +G  P  IT++IL+
Sbjct: 452 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 9/216 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  + E+A + +  + ++GL PD  S+ T+I G  ++GDL GA  +F ++ E+G    
Sbjct: 513 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI  F  K +   A++I++ + +      +  TY V+I+G CK    D      
Sbjct: 573 ADTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 631

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K        T+   I+ L     V  A  +   MV+ G+  + V      D    A
Sbjct: 632 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV------DTILNA 685

Query: 290 GK--IKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
            K  I     L E + +KG ++  +Y +L  G+ +N
Sbjct: 686 DKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVRDN 721



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y   I     AG++ DA+  +  M    C P    YN +MD L      D+A +++  +
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L   + PD+ ++ I L+  C  +R   A   L     RG
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 153


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 264/565 (46%), Gaps = 59/565 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + E A+R +N +      PD +++  +I  L   G +  ALAVFD+M  RG   +V
Sbjct: 230 CRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSV 286

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y+IL+D   K+  Y +A  + + +  +    P++VTYNV+IN +C  G  DE L +  
Sbjct: 287 VTYSILLDATCKESGYRQAMALLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILS 345

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +  +  + D+ TY   +  LC +   +  E +  EM  +    D VT+N ++   C+ G
Sbjct: 346 NLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQG 405

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI----------------- 332
            +    E+ + M   GC+ ++V+Y+ ++ GL + G+VD+A+ +                 
Sbjct: 406 LVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 465

Query: 333 -----------WELLRE-------KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
                      WE   E        +C  D  T   ++  LC+ G +++AI+++ ++ E 
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN 525

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 E  + DA  L++ +   GCK +  T N+L+ G     + E+A
Sbjct: 526 GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDA 585

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L   M R  C P  +++NT+I  LC+     +A   +K M E G  P+  TYS++++ 
Sbjct: 586 EQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDA 645

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           L ++ K   AL+L         TPD+  YN +I  L  AGK+E+AL L   M      P+
Sbjct: 646 LLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPD 703

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
             TY +L  G+ +    D+A+ +   + +  L PD   YN  L G C   R   A +   
Sbjct: 704 TTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFA 763

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
             +  G +P   T+ IL+ A+   G
Sbjct: 764 HMVSSGCMPDESTYVILLEALAYGG 788



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 252/501 (50%), Gaps = 27/501 (5%)

Query: 142 INGLVKSGDLLGALAVFDEMFERGVE--TNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           +  LV+ G++  AL +FD M   G      VV  NILI      G    A+ ++  L   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
            +V    VTYN M+NG C+ GR ++   + + M       D+FT+   I  LC  G +  
Sbjct: 217 ATV----VTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPD 269

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A  V+ +M+  G     VTY+ ++D  C+    ++   L + M  KGC  ++V+YN+LI 
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
            +   G VDEA++I   L    C  D+ T+  ++  LC +    +  ++L E+       
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         +G +  A  +V+ M +HGC  +  T +S+++G     ++++A+ L 
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             +   GC P  ++Y T++ GLC  E++  A   + EML     PD +T++ ++  LCQ 
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
             +D A+++  Q  + G +PD+  YN +I GLC+   ++DA++L S+++   C P++VT+
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL      + A ++  +++     PD +++N  +  LC    ++ A E L     
Sbjct: 570 NTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAE 629

Query: 602 RGILPTTITWHILVRAVMNNG 622
            G +P + T+ I+V A++  G
Sbjct: 630 NGCVPNSSTYSIVVDALLKAG 650



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/648 (24%), Positives = 261/648 (40%), Gaps = 102/648 (15%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHIL-RRLIDPKLVVHVSRILEL 63
           AKR L  L        AL LFDS     G    P +  +IL +RL     V    R+   
Sbjct: 153 AKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAA 212

Query: 64  IEIQKCYCPEDVALSVIQAYGK--------NSMPDKALDVFQRMNEIFGCEAGILCRKRQ 115
           +         +  ++     G+        N MP      F      F      LC + +
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP------FPPDTFTFNPLIRALCVRGR 266

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
              A    + +  +G  P V +Y  +++   K      A+A+ DEM  +G E ++V YN+
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+    +GD   A  I   L       P+ VTY  ++  LC   R+ E  E+   M  N
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN 385

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D  T+ + +  LC+ G V+ A  V   M E G   D VTY++++DG C  G++ + 
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445

Query: 296 FELWEVMGRKGC------------------------------------LNVVSYNILIRG 319
            EL   +   GC                                     + V++N ++  
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L + G VD AI + E + E  C+ D  T+  +I+GLC    ++ A+++L++++  G    
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                          R  DA  L+  M +  C  +  T N+++    Q   L  AI   K
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625

Query: 423 EMSRKGC---------------------------------SPTVVSYNTLINGLCKVERF 449
            M+  GC                                 +P +++YNT+I+ L K  + 
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKM 685

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   ++ M+  G  PD  TY  L  G+C+    D A+++  +    G +PD T YN +
Sbjct: 686 EEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDV 745

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           + G C   + + A+  +++M    C+P+  TY  L++ L   G  D+A
Sbjct: 746 LLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA 793



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 236/533 (44%), Gaps = 51/533 (9%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           L D+  +E GY  +  L   +  +  +P +V +                      +I A 
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV--------------------LINAM 331

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPD 134
                 D+AL++   +    GC+            LC   ++++ +  L  +      PD
Sbjct: 332 CNEGDVDEALNILSNLPS-HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             ++ T++  L + G +  A+ V D M E G   ++V Y+ ++DG    G    A E+  
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RL       P+ + Y  ++ GLC   +++   E+   M  ++   D  T+ + +  LC+ 
Sbjct: 451 RL-KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G V+ A RV  +M E+G   D VTYN +IDG C    I +  EL   +   GC  ++V++
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L++GL    + ++A  +   +   NC  D  T   +I  LC+ G L +AI+ L  + E
Sbjct: 570 NTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAE 629

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  G+   A  L++ M      L  Y  N++++   +A K+E 
Sbjct: 630 NGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITY--NTVISNLTKAGKMEE 687

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ L + M   G  P   +Y +L  G+C+ +    A   ++ + + G  PD   Y+ ++ 
Sbjct: 688 ALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLL 747

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           G C+ ++ D+A+      +  G  PD + Y IL+  L   G +++A +L +++
Sbjct: 748 GFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 117/311 (37%), Gaps = 44/311 (14%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRM 99
           F+ ++  L    LV    R++E +    C  P+ V  + +I      S  D A+++   +
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCS-PDIVTYNCIIDGLCNESCIDDAMELLSDL 557

Query: 100 NEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
               GC+  I         LC   ++E A++ + ++      PD  ++ TVI  L + G 
Sbjct: 558 QSC-GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE---------------- 194
           L  A+     M E G   N   Y+I++D   K G    A E+                  
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVI 676

Query: 195 ----------------RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
                           R+++   + P+  TY  +  G+C+    D  + M  R++     
Sbjct: 677 SNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLS 736

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D+  Y   + G C+    + A   +  MV SG   D  TY  +++     G + E   L
Sbjct: 737 PDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796

Query: 299 WEVMGRKGCLN 309
              +   G L+
Sbjct: 797 LASLCSLGVLD 807


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 279/535 (52%), Gaps = 27/535 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI----LC----RKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           + A+D+F+ M +       I    LC    R +Q++    F   +   G++ D+Y+   +
Sbjct: 52  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   LL A +V    ++ G E + + ++ L++GF  +G    A  + +R+V E  
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-EMK 170

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P++VT + +INGLC  GR  E L + DRM +   + D  TY   ++ LCK+GN   A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++R+M E  I    V Y+ +ID  C+ G   +   L+  M  KG   +VV+Y+ LI GL
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
             +GK D+   +   +  +N   D  T   LI+   K G L +A ++ NE+   G     
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       E  L +A  + + M   GC+ +  T + L+N + +A ++++ + LF+E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +S KG  P  ++YNTL+ G C+  +   A    +EM+ +G  P ++TY +L++GLC + +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ++ AL++  +  +   T  + +YNI+IHG+C+A KV+DA  L+ ++  +   P++VTYN 
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           ++ GL K G   +A  ++  + E+   PD  +YNI ++     S +  + E + +
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 243/460 (52%), Gaps = 20/460 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+E ++    I+I+ + +K   + A  +  R   +    P+ +T++ ++NG C  GR  E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR-AWKLGYEPDTITFSTLVNGFCLEGRVSE 158

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            + + DRM + ++  D  T  + I+GLC  G V  A  +   MVE G   D VTY  +++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C++G      +L+  M  +    +VV Y+I+I  L ++G  D+A+S++  +  K   A
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  LI GLC                   +G+  D A ++  M       +  T ++
Sbjct: 279 DVVTYSSLIGGLCN------------------DGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++ F++  KL  A  L+ EM  +G +P  ++YN+LI+G CK     EA      M+ KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            +PD++TYS+LIN  C++K++D  ++L  +   KG  P+   YN L+ G C +GK+  A 
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+  M  R   P++VTY  L+DGL   G+ +KALEI+  + + R+   I  YNI + G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C+ S++ DA+        +G+ P  +T+++++  +   G+
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 223/422 (52%), Gaps = 20/422 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K +  +A   ++ + E G +PD  +YG V+N L KSG+   AL +F +M ER ++ +
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+I+ID   K G +  A  ++  + M+  +  +VVTY+ +I GLC  G++D+  +M 
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKML 303

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D  T+ + I    K G +  A+ +Y EM+  GI  D +TYN++IDGFC+ 
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + E  +++++M  KGC  ++V+Y+ILI    +  +VD+ + ++  +  K    ++ T+
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G C++G LN A ++  E                  M   G   +  T   L++G 
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQE------------------MVSRGVPPSVVTYGILLDGL 465

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L  A+ +F++M +   +  +  YN +I+G+C   +  +A+S    + +KG KPD+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+++I GLC+   +  A  L  +  + G TPD   YNILI        +  +++L   
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585

Query: 529 MK 530
           MK
Sbjct: 586 MK 587



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 31/439 (7%)

Query: 56  HVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFG 104
            VS  L LI+  ++  + P++V    V+    K+     ALD+F++M E         + 
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC+   F+ A    N +  KG+K DV +Y ++I GL   G       +  EM  R
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            +  +VV ++ LID F K+G  + AKE++  ++    + P+ +TYN +I+G CK     E
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHE 368

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             +M+D M     E D  TY   I+  CKA  V+   R++RE+   G+  + +TYN ++ 
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           GFC++GK+    EL++ M  +G   +VV+Y IL+ GL +NG++++A+ I+E +++     
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
               + ++I+G+C                     ++ DA SL   +   G K +  T N 
Sbjct: 489 GIGIYNIIIHGMCN------------------ASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++ G  +   L  A  LF++M   GC+P   +YN LI           +   ++EM   G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590

Query: 464 WKPDMITYSLLINGLCQSK 482
           +  D  T  ++I+ L   +
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 129/234 (55%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M+ +G + + YT   ++N + +  KL  A  +     + G  P  ++++TL+NG C   R
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA + V  M+E   +PD++T S LINGLC   ++  AL L  + ++ GF PD   Y  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +++ LC +G    AL L+  M++RN   ++V Y+ ++D L K G  D AL ++N +  + 
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ D+++Y+  + GLC+  +  D  + L + + R I+P  +T+  L+   +  G
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ DA  L   M +          N L +   +  + +  +   K M   G    + +  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +IN  C+ ++   A+S +    + G++PD IT+S L+NG C   ++  A+ L  + ++ 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              PD+   + LI+GLC  G+V +AL L   M +    P+ VTY  +++ L K+G+   A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L+++  + E  ++  ++ Y+I +  LC      DA    N+   +GI    +T+  L+  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 618 VMNNG 622
           + N+G
Sbjct: 290 LCNDG 294



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L NG +   K+ +AI LF+ M +    PT + +N L + + + +++     F K M   G
Sbjct: 42  LRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + DM T +++IN  C+ KK+  A  +  +  + G+ PD   ++ L++G C  G+V +A+
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M +    P+LVT +TL++GL   G   +AL + + ++E   +PD ++Y   L  L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           C     + A +       R I  + + + I++ ++  +G+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 125/308 (40%), Gaps = 64/308 (20%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T  AL D   +E     +  L++ ++ R I P  + + S I         +C E+     
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI-------DGFCKENCLHEA 369

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG 130
            Q +  + M  K            GCE  I+         C+ ++ +   R    +  KG
Sbjct: 370 NQMF--DLMVSK------------GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P+  +Y T++ G  +SG L  A  +F EM  RGV  +VV Y IL+DG    G+  +A 
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475

Query: 191 EIWERL----------------------------------VMETSVYPNVVTYNVMINGL 216
           EI+E++                                  + +  V P+VVTYNVMI GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G   E   ++ +MK++    D FTY   I        +  +  +  EM   G   D+
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595

Query: 277 VTYNAMID 284
            T   +ID
Sbjct: 596 STIKMVID 603


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 176/556 (31%), Positives = 269/556 (48%), Gaps = 32/556 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE----------AGILCRKRQFEKAKRFLNSLW 127
           ++I+AY K    D A  V   M E  GC           AG LCR    E+A  F   + 
Sbjct: 122 TLIEAYCKVREFDTAKKVLVEMRE-RGCGLNTVTYNVLIAG-LCRSGAVEEAFGFKKDME 179

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + GL PD ++YG +INGL KS     A A+ DEM    ++ NVV Y  LIDGF ++G+  
Sbjct: 180 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 239

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ + +V    V PN +TY+ ++ GLCK G+ D    +  +M ++    D+ TY   
Sbjct: 240 EAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G  +  N + A R+  EM  +GI  +  TY+ MI G C++G+ ++  +L E M  KG 
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N   Y  LI G    G V  A  I++ + + N   D   +  LI GL K         
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK--------- 409

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR+ ++     +M + G   N +T + L++G+++   LE+A  L + M  
Sbjct: 410 ---------VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P  V Y  L+    K +   +  S  K ML++G   D   Y +LI+ L  S  ++ 
Sbjct: 461 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 520

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A ++  +  + G  PDV +Y+ LI GLC     E A  +   M K+   PN+V YN L+D
Sbjct: 521 AFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 580

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K+GD   A  ++N IL + L P+ ++Y   + G C    +S+AF   N+ L  GI P
Sbjct: 581 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640

Query: 607 TTITWHILVRAVMNNG 622
               + +L     + G
Sbjct: 641 DAFVYSVLTTGCSSAG 656



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 284/598 (47%), Gaps = 46/598 (7%)

Query: 63  LIEIQKCYCPEDVALSVIQ------AYGKNSMPDKALDVFQRMNEIF-GCEAGILCRKRQ 115
           LI++ + Y    V L+ I        +   ++ D  +D +++   +    E  ++ R R 
Sbjct: 18  LIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRG 77

Query: 116 FEKAKRFLNSL-------------WE-------KGLKPDVYSYGTVINGLVKSGDLLGAL 155
              + R  N+L             W+        G+ PDVY+Y T+I    K  +   A 
Sbjct: 78  LAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAK 137

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            V  EM ERG   N V YN+LI G  + G    A   +++ + +  + P+  TY  +ING
Sbjct: 138 KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVPDGFTYGALING 196

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK  R +E   + D M   E + +   Y + I G  + GN + A ++ +EMV +G+  +
Sbjct: 197 LCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 256

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
            +TY+ ++ G C+ G++     L + M R     + ++YN++I G   +    +A  +  
Sbjct: 257 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            +     + +  T+ ++I+GLC++G   KA  +L E+   G                 EG
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            ++ A  + ++M K     + Y  NSL+ G  +  ++E +   F +M  +G  P   +Y+
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI+G  K      A   V+ ML+ G KP+ + Y  L+    +S  I+         L +
Sbjct: 437 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 496

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   D  +Y ILIH L S+G +E A ++ S ++K   VP++  Y++L+ GL KT D +KA
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKA 556

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             I + + ++ + P+I+ YN  + GLC    +S A    N  L +G++P  +T+  L+
Sbjct: 557 FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 614



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 228/451 (50%), Gaps = 21/451 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R    + A R L+ +   G+ P+VY+Y  +I+GL +SG+   A  + +EM  +G++ N  
Sbjct: 304 RHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 363

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G+ ++G+   A EI++++  + +V P++  YN +I GL K GR +E  + + +
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++     + FTY   IHG  K G++E AE++ + M+++G+  + V Y  +++ + ++  
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I++    ++ M  +G  L+   Y ILI  L  +G ++ A  +   + +     D   +  
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK     KA  IL+E                  M K G   N    N+L++G  +
Sbjct: 543 LISGLCKTADREKAFGILDE------------------MSKKGVDPNIVCYNALIDGLCK 584

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  +  A  +F  +  KG  P  V+Y +LI+G CKV     A+    EML  G  PD   
Sbjct: 585 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 644

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+L  G   +  ++ A+ L  +   +G    ++ +N L+ G C  GK+++ L+L   + 
Sbjct: 645 YSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIM 703

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            R  VPN +T   ++ GL + G   +   I+
Sbjct: 704 GRGLVPNALTIENIISGLSEAGKLSEVHTIF 734



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 21/415 (5%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAERVYREMV 268
           +V+++   K GR  +  E+   M ++     S   C + +  L +A  +    +V   MV
Sbjct: 51  DVLVDTYKKSGRVQDAAEVV-LMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV 109

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
            +GI  D  TY+ +I+ +C+  +     ++   M  +GC LN V+YN+LI GL  +G V+
Sbjct: 110 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 169

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           EA    + + +     D  T+G LINGLCK+   N+A  +L+E                 
Sbjct: 170 EAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE----------------- 212

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M     K N     +L++GF++    + A  + KEM   G  P  ++Y+ L+ GLCK+ 
Sbjct: 213 -MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 271

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A   +K+M+    +PD ITY+L+I G  +      A +L  +    G +P+V  Y+
Sbjct: 272 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYS 331

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           I+IHGLC +G+ E A  L   M  +   PN   Y  L+ G  + G+   A EI++ + + 
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 391

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + PD+  YN  + GL    R+ ++ ++      RG+LP   T+  L+   + NG
Sbjct: 392 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 12/402 (2%)

Query: 79  VIQAYGKNSMPDKALDVFQRM-------NEIFGCEA-GILCRKRQFEKAKRFLNSLWEKG 130
           +I  Y KN   + A  + QRM       N++   +      +    EK      S+ ++G
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +  D   YG +I+ L  SG++  A  V  E+ + G   +V  Y+ LI G  K  D  +A 
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            I + +  +  V PN+V YN +I+GLCK G       +++ +       +  TY S I G
Sbjct: 558 GILDEMS-KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
            CK G++  A  +Y EM+ +GI  DA  Y+ +  G   AG +++   L E M  +G  ++
Sbjct: 617 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASI 676

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            S+N L+ G  + GK+ E + +  ++  +    ++ T   +I+GL + G L++   I  E
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736

Query: 371 VEE-GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           +++   E      +SL   M   G K+     + ++    +   L+ A+ L   +  K  
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSA 795

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG-WKPDMIT 470
                SY  +++ LC+  +  EA + +KEM ++G  +P ++ 
Sbjct: 796 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/117 (20%), Positives = 56/117 (47%)

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           ++L+     +G+V+DA ++   M+ R   P++   N L+  L +        ++   ++ 
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             + PD+ +Y+  ++  C       A + L +   RG    T+T+++L+  +  +GA
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 255/520 (49%), Gaps = 25/520 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR++   +    L  + ++ +    Y+YGTV+ G+  SGDL GA  +  EM   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI  F +   +  A  + + +  E  + P++  YN +I GL K  R DE      
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +N  + ++FTY +FI G  +A     A++  +EM E G+  + V    +I+ +C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E    +  M  +G L +  +Y +L+ GL +N KVD+A  I+  +R K    D  ++G
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLING  K G + KA  I +E+ E                   G   N    N L+ GF 
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVE------------------EGLTPNVIIYNMLLGGFC 673

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           ++ ++E A  L  EMS KG  P  V+Y T+I+G CK     EA+    EM  KG  PD  
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ L++G C+   ++ A+ +     +KG       +N LI+ +   GK E   ++ + +
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792

Query: 530 KK----RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
                 R   PN VTYN ++D L K G+ + A E+++ +    L P +I+Y   L G   
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             R ++ F   ++A+  GI P  I + +++ A +  G +T
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 261/562 (46%), Gaps = 57/562 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E AK  L  +   G+  D ++Y  +I+GL+K  +   A  +  EM   G+   
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+  I    K+G   +AK +++ ++  + + P    Y  +I G C+     +  E+ 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MKK       +TY + + G+C +G+++GA  + +EM+ SG   + V Y  +I  F + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   + + M  +G   ++  YN LI GL +  ++DEA S    + E     ++ T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I+G  +      A + + E+ E G                 +G++ +A S    M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +A T   LMNG  +  K+++A  +F+EM  KG +P V SY  LING  K+    +
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S   EM+E+G  P++I Y++L+ G C+S +I+ A +L  +   KG  P+   Y  +I 
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG------------------------ 547
           G C +G + +A +L+  MK +  VP+   Y TL+DG                        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 548 ----------LFKTGDCDKALEIWNHILEERL----RPDIISYNITLKGLCSCSRMSDAF 593
                     +FK G  +   E+ N +++       +P+ ++YNI +  LC    +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 594 EFLNDALCRGILPTTITWHILV 615
           E  +      ++PT IT+  L+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLL 847



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 246/499 (49%), Gaps = 22/499 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +   S+  KGL P  Y+Y  +I+GL K   L  A ++  EM   GV  +   Y++LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 179 GFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           G  K  +   AK +   +V    ++ P +  Y+  I  + K G  ++   ++D M  +  
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
              +  Y S I G C+  NV     +  EM +  I +   TY  ++ G C +G +   + 
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           + + M   GC  NVV Y  LI+  L+N +  +A+ + + ++E+    D   +  LI GL 
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                    R+ +A S +  M ++G K NA+T  + ++G+I+AS+  +
Sbjct: 499 K------------------AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    KEM   G  P  V    LIN  CK  +  EA S  + M+++G   D  TY++L+N
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++ K+D A ++  +   KG  PDV  Y +LI+G    G ++ A  ++  M +    P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N++ YN L+ G  ++G+ +KA E+ + +  + L P+ ++Y   + G C    +++AF   
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 597 NDALCRGILPTTITWHILV 615
           ++   +G++P +  +  LV
Sbjct: 721 DEMKLKGLVPDSFVYTTLV 739



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 244/504 (48%), Gaps = 37/504 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKRFLNSLWE 128
           ++I+ + +NS    A+ V + M E  G    I C         + ++ ++A+ FL  + E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GLKP+ ++YG  I+G +++ +   A     EM E GV  N V    LI+ + KKG  + 
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A   +  +V +  +  +  TY V++NGL K  + D+  E++  M+      D F+Y   I
Sbjct: 576 ACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +G  K GN++ A  ++ EMVE G+  + + YN ++ GFCR+G+I++  EL + M  KG  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V+Y  +I G  ++G + EA  +++ ++ K    DS  +  L++G C+   + +AI I
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNG------------------- 407
               ++G     A   +L+N + K G  +L     N LM+G                   
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   LE A  LF +M      PTV++Y +L+NG  K+ R  E +    E +  G +PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD-----VTMYNILIHGLCSAGKVEDA 522
            I YS++IN   +      AL L  Q   K    D     ++    L+ G    G++E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMD 546
            ++  NM +   +P+  T   L++
Sbjct: 935 EKVMENMVRLQYIPDSATVIELIN 958



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 232/522 (44%), Gaps = 74/522 (14%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME----------------- 199
           V+  M ER V  +V  Y++LI    + G+    K++  +   E                 
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267

Query: 200 ---TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                + P   TY+V+I+GLCK  R ++   +   M       D+ TY   I GL K  N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            + A+ +  EMV  GI +    Y+  I    + G +++   L++ M   G +    +Y  
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G      V +   +   ++++N      T+G ++ G+C +G L+ A  I+ E     
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE----- 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   GC+ N     +L+  F+Q S+  +A+ + KEM  +G +P +  
Sbjct: 443 -------------MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK------ 489
           YN+LI GL K +R  EA SF+ EM+E G KP+  TY   I+G  ++ +   A K      
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 490 ---------LCC--------------------QFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                    LC                       + +G   D   Y +L++GL    KV+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA +++  M+ +   P++ +Y  L++G  K G+  KA  I++ ++EE L P++I YN+ L
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            G C    +  A E L++   +G+ P  +T+  ++     +G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 30/414 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +  +A     S+ ++G+  D  +Y  ++NGL K+  +  A  +F EM  +G+  +V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y +LI+GF K G+  +A  I++ +V E  + PNV+ YN+++ G C+ G  ++  E+ D
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ TYC+ I G CK+G++  A R++ EM   G+  D+  Y  ++DG CR  
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCN----ADS 345
            ++    ++    +KGC +  + +N LI  + + GK +    +   L + + +     + 
Sbjct: 747 DVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ ++I+ LCK                  EG L  A  L ++M          T  SL+
Sbjct: 806 VTYNIMIDYLCK------------------EGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK--- 462
           NG+ +  +      +F E    G  P  + Y+ +IN   K     +A   V +M  K   
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 463 --GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             G K  + T   L++G  +  ++++A K+    ++  + PD      LI+  C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 56/275 (20%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G+I    +E A+F+F         P +     L++ L +  R    +   K M+E+ 
Sbjct: 157 LFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 464 WKPDMITYSLLINGLCQSK---------------------KIDMALKLCCQFLQKGFTPD 502
              D+ TY +LI   C++                       +D ALKL    + KG  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD------- 555
              Y++LI GLC   ++EDA  L   M       +  TY+ L+DGL K  + D       
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 556 ----------------------------KALEIWNHILEERLRPDIISYNITLKGLCSCS 587
                                       KA  +++ ++   L P   +Y   ++G C   
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   +E L +   R I+ +  T+  +V+ + ++G
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 37/212 (17%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S+K     + S++ L   LC    F +A S V+ M+E+ W P    +S ++         
Sbjct: 89  SQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR-------- 139

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                 C Q    G + D  ++ IL  G  +   +E+A+ ++S+      VP L     L
Sbjct: 140 ------CSQEFV-GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVL 192

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS-------------- 590
           +D L +    D   +++  ++E  +  D+ +Y++ +   C    +               
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252

Query: 591 -------DAFEFLNDALCRGILPTTITWHILV 615
                   A +     +C+G++P   T+ +L+
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLI 284


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 255/520 (49%), Gaps = 25/520 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR++   +    L  + ++ +    Y+YGTV+ G+  SGDL GA  +  EM   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI  F +   +  A  + + +  E  + P++  YN +I GL K  R DE      
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +N  + ++FTY +FI G  +A     A++  +EM E G+  + V    +I+ +C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E    +  M  +G L +  +Y +L+ GL +N KVD+A  I+  +R K    D  ++G
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLING  K G + KA  I +E+ E                   G   N    N L+ GF 
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVE------------------EGLTPNVIIYNMLLGGFC 673

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           ++ ++E A  L  EMS KG  P  V+Y T+I+G CK     EA+    EM  KG  PD  
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ L++G C+   ++ A+ +     +KG       +N LI+ +   GK E   ++ + +
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792

Query: 530 KK----RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
                 R   PN VTYN ++D L K G+ + A E+++ +    L P +I+Y   L G   
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             R ++ F   ++A+  GI P  I + +++ A +  G +T
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 261/562 (46%), Gaps = 57/562 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E AK  L  +   G+  D ++Y  +I+GL+K  +   A  +  EM   G+   
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+  I    K+G   +AK +++ ++  + + P    Y  +I G C+     +  E+ 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MKK       +TY + + G+C +G+++GA  + +EM+ SG   + V Y  +I  F + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   + + M  +G   ++  YN LI GL +  ++DEA S    + E     ++ T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I+G  +      A + + E+ E G                 +G++ +A S    M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +A T   LMNG  +  K+++A  +F+EM  KG +P V SY  LING  K+    +
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S   EM+E+G  P++I Y++L+ G C+S +I+ A +L  +   KG  P+   Y  +I 
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG------------------------ 547
           G C +G + +A +L+  MK +  VP+   Y TL+DG                        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 548 ----------LFKTGDCDKALEIWNHILEERL----RPDIISYNITLKGLCSCSRMSDAF 593
                     +FK G  +   E+ N +++       +P+ ++YNI +  LC    +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 594 EFLNDALCRGILPTTITWHILV 615
           E  +      ++PT IT+  L+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLL 847



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 246/499 (49%), Gaps = 22/499 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +   S+  KGL P  Y+Y  +I+GL K   L  A ++  EM   GV  +   Y++LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 179 GFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           G  K  +   AK +   +V    ++ P +  Y+  I  + K G  ++   ++D M  +  
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
              +  Y S I G C+  NV     +  EM +  I +   TY  ++ G C +G +   + 
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           + + M   GC  NVV Y  LI+  L+N +  +A+ + + ++E+    D   +  LI GL 
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                    R+ +A S +  M ++G K NA+T  + ++G+I+AS+  +
Sbjct: 499 K------------------AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    KEM   G  P  V    LIN  CK  +  EA S  + M+++G   D  TY++L+N
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++ K+D A ++  +   KG  PDV  Y +LI+G    G ++ A  ++  M +    P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N++ YN L+ G  ++G+ +KA E+ + +  + L P+ ++Y   + G C    +++AF   
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 597 NDALCRGILPTTITWHILV 615
           ++   +G++P +  +  LV
Sbjct: 721 DEMKLKGLVPDSFVYTTLV 739



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 244/504 (48%), Gaps = 37/504 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKRFLNSLWE 128
           ++I+ + +NS    A+ V + M E  G    I C         + ++ ++A+ FL  + E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GLKP+ ++YG  I+G +++ +   A     EM E GV  N V    LI+ + KKG  + 
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A   +  +V +  +  +  TY V++NGL K  + D+  E++  M+      D F+Y   I
Sbjct: 576 ACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +G  K GN++ A  ++ EMVE G+  + + YN ++ GFCR+G+I++  EL + M  KG  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V+Y  +I G  ++G + EA  +++ ++ K    DS  +  L++G C+   + +AI I
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNG------------------- 407
               ++G     A   +L+N + K G  +L     N LM+G                   
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   LE A  LF +M      PTV++Y +L+NG  K+ R  E +    E +  G +PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD-----VTMYNILIHGLCSAGKVEDA 522
            I YS++IN   +      AL L  Q   K    D     ++    L+ G    G++E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMD 546
            ++  NM +   +P+  T   L++
Sbjct: 935 EKVMENMVRLQYIPDSATVIELIN 958



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 232/522 (44%), Gaps = 74/522 (14%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME----------------- 199
           V+  M ER V  +V  Y++LI    + G+    K++  +   E                 
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267

Query: 200 ---TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                + P   TY+V+I+GLCK  R ++   +   M       D+ TY   I GL K  N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            + A+ +  EMV  GI +    Y+  I    + G +++   L++ M   G +    +Y  
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G      V +   +   ++++N      T+G ++ G+C +G L+ A  I+ E     
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE----- 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   GC+ N     +L+  F+Q S+  +A+ + KEM  +G +P +  
Sbjct: 443 -------------MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK------ 489
           YN+LI GL K +R  EA SF+ EM+E G KP+  TY   I+G  ++ +   A K      
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 490 ---------LCC--------------------QFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                    LC                       + +G   D   Y +L++GL    KV+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA +++  M+ +   P++ +Y  L++G  K G+  KA  I++ ++EE L P++I YN+ L
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            G C    +  A E L++   +G+ P  +T+  ++     +G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 30/414 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +  +A     S+ ++G+  D  +Y  ++NGL K+  +  A  +F EM  +G+  +V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y +LI+GF K G+  +A  I++ +V E  + PNV+ YN+++ G C+ G  ++  E+ D
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ TYC+ I G CK+G++  A R++ EM   G+  D+  Y  ++DG CR  
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCN----ADS 345
            ++    ++    +KGC +  + +N LI  + + GK +    +   L + + +     + 
Sbjct: 747 DVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ ++I+ LCK                  EG L  A  L ++M          T  SL+
Sbjct: 806 VTYNIMIDYLCK------------------EGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK--- 462
           NG+ +  +      +F E    G  P  + Y+ +IN   K     +A   V +M  K   
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 463 --GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             G K  + T   L++G  +  ++++A K+    ++  + PD      LI+  C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 56/275 (20%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G+I    +E A+F+F         P +     L++ L +  R    +   K M+E+ 
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 464 WKPDMITYSLLINGLCQSK---------------------KIDMALKLCCQFLQKGFTPD 502
              D+ TY +LI   C++                       +D ALKL    + KG  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD------- 555
              Y++LI GLC   ++EDA  L   M       +  TY+ L+DGL K  + D       
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 556 ----------------------------KALEIWNHILEERLRPDIISYNITLKGLCSCS 587
                                       KA  +++ ++   L P   +Y   ++G C   
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   +E L +   R I+ +  T+  +V+ + ++G
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 37/212 (17%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S+K     + S++ L   LC    F +A S V+ M+E+ W P    +S ++         
Sbjct: 89  SQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR-------- 139

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                 C Q    G + D  ++ IL  G  + G +E+A+ ++S+      VP L     L
Sbjct: 140 ------CSQEFV-GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVL 192

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS-------------- 590
           +D L +    D   +++  ++E  +  D+ +Y++ +   C    +               
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252

Query: 591 -------DAFEFLNDALCRGILPTTITWHILV 615
                   A +     +C+G++P   T+ +L+
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLI 284


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 263/474 (55%), Gaps = 20/474 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR R+   A   +  + + G +P+  ++ T+INGL   G +  AL + D M E G + +
Sbjct: 231 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 290

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++  N L++G    G    A  + +++V E    PN VTY  ++N +CK G+    +E+ 
Sbjct: 291 LITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D+  Y   I GLCK G+++ A  ++ EM   GI  + +TYN +I GFC A
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +  +L  +++ RK   NVV++++LI   ++ GK+ EA  + + +  +    D+ T+
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 469

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK  +L+KA Q                  +V+ M   GC  N  T N L+NG+
Sbjct: 470 TSLIDGFCKENHLDKANQ------------------MVDLMVSKGCDPNIRTFNILINGY 511

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A+++++ + LF++MS +G     V+YNTLI G C++ +   A    +EM+ +   P++
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY +L++GLC + + + AL++  +  +     D+ +YNI+IHG+C+A KV+DA  L+ +
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 631

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  +   P + TYN ++ GL K G   +A  ++  + E+   PD  +YNI ++ 
Sbjct: 632 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 253/492 (51%), Gaps = 20/492 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V  +  + + + K+      LA+  +M  +G+  N+   +I+I+ F +      A   
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             +++ +    PN +T++ +INGLC  GR  E LE+ DRM +   + D  T  + ++GLC
Sbjct: 244 MGKII-KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 302

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
            +G    A  +  +MVE G   +AVTY  +++  C++G+     EL   M  +   L+ V
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+I+I GL ++G +D A +++  +  K    +  T+ +LI G C               
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC--------------- 407

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR  D A L+  M K     N  T + L++ F++  KL  A  L KEM  +G +P
Sbjct: 408 ---NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             ++Y +LI+G CK     +A   V  M+ KG  P++ T+++LING C++ +ID  L+L 
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 524

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   D   YN LI G C  GK+  A +L+  M  R   PN+VTY  L+DGL   
Sbjct: 525 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ +KALEI+  I + ++  DI  YNI + G+C+ S++ DA++       +G+ P   T+
Sbjct: 585 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 644

Query: 612 HILVRAVMNNGA 623
           +I++  +   G 
Sbjct: 645 NIMIGGLCKKGP 656



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 271/545 (49%), Gaps = 28/545 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+D+F+ M           F      + + +Q++        +  KG+  ++Y+   +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   L  A +   ++ + G E N + ++ LI+G   +G    A E+ +R+V E  
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-EMG 286

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+++T N ++NGLC  G+  E + + D+M +   + ++ TY   ++ +CK+G    A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
            + R+M E  I +DAV Y+ +IDG C+ G +   F L+  M  KG   N+++YNILI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G+ D+   +   + ++  N +  T  VLI+   K                  EG+L 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK------------------EGKLR 448

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L   M   G   +  T  SL++GF + + L+ A  +   M  KGC P + ++N LI
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           NG CK  R  +     ++M  +G   D +TY+ LI G C+  K+++A +L  + + +   
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 568

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  Y IL+ GLC  G+ E AL+++  ++K     ++  YN ++ G+      D A ++
Sbjct: 569 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 628

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  + ++P + +YNI + GLC    +S+A          G  P   T++IL+RA + 
Sbjct: 629 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 688

Query: 621 NGAST 625
           +G +T
Sbjct: 689 DGDAT 693



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 226/463 (48%), Gaps = 28/463 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +  +A   ++ + E G +P+  +YG V+N + KSG    A+ +  +M ER ++ +
Sbjct: 301 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 360

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y+I+IDG  K G    A  ++  + M+  +  N++TYN++I G C  GR+D+  ++ 
Sbjct: 361 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K +   +  T+   I    K G +  AE +++EM+  GI  D +TY ++IDGFC+ 
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + +  ++ ++M  KGC  N+ ++NILI G  +  ++D+ + ++  +  +   AD+ T+
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G C+ G LN A ++  E                  M       N  T   L++G 
Sbjct: 540 NTLIQGFCELGKLNVAKELFQE------------------MVSRKVPPNIVTYKILLDGL 581

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               + E A+ +F+++ +      +  YN +I+G+C   +  +A+     +  KG KP +
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I GLC+   +  A  L  +  + G  PD   YNILI      G    +++L   
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701

Query: 529 MKKRNCVPNLVTYNTLMDGL--------FKTGDCDKALEIWNH 563
           +K+     +  T   ++D L         K  +C K+   WN 
Sbjct: 702 LKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKSTSFWNQ 744



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 39/296 (13%)

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           N+  + + EV+ G +G++      + RM  +   L+      L +G +   K ++AI LF
Sbjct: 119 NEFDEWIKEVDVGSDGKIR-YEDFIARMVANDRNLSYR--ERLRSGLVDI-KADDAIDLF 174

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           ++M      PTV+ ++ L + + K +++    +  K+M  KG   ++ T S++IN  C+ 
Sbjct: 175 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 234

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           +K+ +A     + ++ G+ P+   ++ LI+GLC  G+V +AL+L   M +    P+L+T 
Sbjct: 235 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 294

Query: 542 NTLMDGL-----------------------------------FKTGDCDKALEIWNHILE 566
           NTL++GL                                    K+G    A+E+   + E
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             ++ D + Y+I + GLC    + +AF   N+   +GI    IT++IL+    N G
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 260/509 (51%), Gaps = 20/509 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ + ++A      + ++G++PD+ +Y T+I+G  K+G L     +F +   +GV+ +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++  ID + K GD   A  +++R++ +  + PNVVTY ++I GLC+ GR  E   M+
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMY 414

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++ K   E    TY S I G CK GN+     +Y +M++ G   D V Y  ++DG  + 
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +        +++G+   LNVV +N LI G     + DEA+ ++ L+       D  T 
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             ++            + I+       EGRL +A  L  RM K G + +A    +L++ F
Sbjct: 535 TTVMR-----------VSIM-------EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K    + LF  M R   S  +   N +I+ L K  R  +A  F   ++E   +PD+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I G C  +++D A ++        F P+     ILIH LC    ++ A++++S 
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M ++   PN VTY  LMD   K+ D + + +++  + E+ + P I+SY+I + GLC   R
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRA 617
           + +A    + A+   +LP  + + IL+R 
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRG 785



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 45/255 (17%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRF 122
           P+ +A  ++I A+ K+  P   L +F  M       +I  C   I  L +  + E A +F
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623

Query: 123 LNSLWEKGLKPDVYSYGTVING-----------------------------------LVK 147
            N+L E  ++PD+ +Y T+I G                                   L K
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           + D+ GA+ +F  M E+G + N V Y  L+D F K  D   + +++E +  E  + P++V
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIV 742

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           +Y+++I+GLCK GR DE   ++ +    +   D   Y   I G CK G +  A  +Y  M
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802

Query: 268 VESGIFVDAVTYNAM 282
           + +G+  D +   A+
Sbjct: 803 LRNGVKPDDLLQRAL 817



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 15/215 (6%)

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVE---------RFGEAYSFVKEMLEKGWKPDMI 469
           F + E+S K  S   +++  + NG+  V            G+ ++ +  + ++    D+ 
Sbjct: 90  FRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVC 149

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +  L+   C+   +D AL++     Q G   P  ++Y +L + L  + +V+     +  
Sbjct: 150 KF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDK 206

Query: 529 MKKRNCVPNLVT-YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           + +    P+ V+ +  ++D LF  G+  KAL+    ++E   R  I+S N  LKGL S  
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVD 265

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++  A   L+  L  G  P  +T+  L+      G
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 170/577 (29%), Positives = 284/577 (49%), Gaps = 65/577 (11%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE-----LIEIQKCY 70
           ++P  AL  F++A  +     +  L+  I+  L+  KL+ H   +L      L++  K Y
Sbjct: 41  RSPWKALEFFNAAPEK-----NIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPY 95

Query: 71  CPEDVALSVIQ----------AYG-------KNSMPDKALDVFQRMNEIFGCEA-----G 108
               +A S +            YG       K  + ++AL ++ ++      +A      
Sbjct: 96  HACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLY 155

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L +  +FE   R    +   GL P V ++GT+I+G  + GDLL A  +FDEM  +G+  
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            V+ Y ILI G         A E   R + E  VYPNV TYN +++G CK     + L +
Sbjct: 216 TVIVYTILIRGLCSDNKIEEA-ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRL 274

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M       D  T+   I GLCK G ++ A  ++  M++  +  +   YN++ID +C+
Sbjct: 275 YQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCK 334

Query: 289 AGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + E   L+  + R +   +V +Y+ILIRGL    + +EA +I+E + ++   A+S T
Sbjct: 335 VGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G CK G ++KA++I                   ++M ++G + N  T ++L++G
Sbjct: 395 YNSLIDGCCKEGKMDKALEI------------------CSQMTENGVEPNVITFSTLIDG 436

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           + +   L+ A+ ++ EM  K  SP VV+Y  +I+G CK     EA     +ML+ G  P+
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496

Query: 468 MITYSLLINGLCQSKKIDMALKLC----------CQFLQKGFTPDVT---MYNILIHGLC 514
             T S L++GLC+  KI  AL+L           C     G  P +T    Y  LIHGLC
Sbjct: 497 CYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLC 556

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
             G+   A++L+S+M++    P+ V Y  ++ GLF+ 
Sbjct: 557 QDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 256/512 (50%), Gaps = 38/512 (7%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ L      P+VY  G +I  L K   +  AL+++ ++   G    +   N+L+    K
Sbjct: 105 LSRLKSSKFTPNVY--GELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVK 159

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G +     I+E ++    + P+V+T+  +I+G C+ G      EM+D M+         
Sbjct: 160 TGRFELLWRIYEEMI-SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVI 218

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
            Y   I GLC    +E AE ++R M E G++ +  TYN ++DG+C+    K+   L++ M
Sbjct: 219 VYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDM 278

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G + +VV++ ILI GL + G++  A +++  + + +   +   +  LI+  CK G +
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDV 338

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A+ +  E+E                  +     + +T + L+ G    S+ E A  +F
Sbjct: 339 SEAMALFLELE------------------RFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           ++M+++G     V+YN+LI+G CK  +  +A     +M E G +P++IT+S LI+G C+ 
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           + +  A+ +  + + K  +PDV  Y  +I G C  G +++AL+LYS+M      PN  T 
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERL----------RPDI---ISYNITLKGLCSCSR 588
           + L+DGL K G    ALE++   +E +           +P +   ++Y   + GLC   +
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            S A +  +D    G+ P  + + +++R +  
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ 592



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 250/506 (49%), Gaps = 49/506 (9%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA  F N+  EK ++     Y  +I+ LV S  L  A  + +++ +  V+++        
Sbjct: 45  KALEFFNAAPEKNIQ----LYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSH-------- 92

Query: 178 DGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
                   Y   +  +  L  +  +   PNV  Y  +I  LCK    +E L M+ ++   
Sbjct: 93  ------KPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGA- 143

Query: 236 EREKDSFTYCS-FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +   C+  ++ L K G  E   R+Y EM+ +G+    +T+  +IDG CR G +  
Sbjct: 144 ---ALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLR 200

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             E+++ M  KG +  V+ Y ILIRGL  + K++EA S+   +RE     +  T+  L++
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLAD-------------------AASLVNRMDKHGC 394
           G CK     +A+++  ++   GEG + D                   A +L   M K   
Sbjct: 261 GYCKLANAKQALRLYQDML--GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSV 318

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N    NSL++ + +   +  A+ LF E+ R   SP V +Y+ LI GLC V R  EA +
Sbjct: 319 TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             ++M ++G   + +TY+ LI+G C+  K+D AL++C Q  + G  P+V  ++ LI G C
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
               ++ A+ +YS M  ++  P++VTY  ++DG  K G   +AL++++ +L+  + P+  
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDAL 600
           + +  L GLC   ++SDA E   + +
Sbjct: 499 TISCLLDGLCKDGKISDALELFTEKI 524



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 16/325 (4%)

Query: 314 NILIRGLLENGKVDEA--ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           N L++ L+++ K   A  ++  EL R K+       +G LI  LCK   + +A+ + ++V
Sbjct: 82  NDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV 141

Query: 372 EEG--------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                              GR      +   M  +G   +  T  +L++G  +   L  A
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRA 201

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +F EM  KG  PTV+ Y  LI GLC   +  EA S  + M E G  P++ TY+ L++G
Sbjct: 202 QEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDG 261

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+      AL+L    L +G  PDV  + ILI GLC  G+++ A  L+ NM K +  PN
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPN 321

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +  YN+L+D   K GD  +A+ ++  +    + PD+ +Y+I ++GLCS SR  +A     
Sbjct: 322 IAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFE 381

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
                GIL  ++T++ L+      G
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEG 406


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 282/563 (50%), Gaps = 33/563 (5%)

Query: 92  ALD-VFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK---GLKPDVYSY 138
           A+D V +RM E+ GC   +         LC + + ++A   L+ + +    G  PDV SY
Sbjct: 146 AMDIVLRRMTEL-GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TV+NG  K GD   A + + EM +RG+  +VV Y+ +I    K     +A E+   +V 
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV- 263

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+ +TYN +++G C  G+  E +    +M+ +  E +  TY S ++ LCK G   
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A +++  M + G+  D  TY  ++ G+   G + E   L ++M R G   +   +NILI
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGE 376
               +  KVD+A+ ++  +R+   N +   +G +I+ LCK+G ++ A+    + ++EG  
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 377 GRLADAASLVN----------------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
             +    SL++                 M   G  LN    NS+++   +  ++  +  L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  M R G  P +++YNTLI+G C   +  EA   +  M+  G KPD++TY  LING C+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D AL L  + +  G +P++  YNI++ GL    +   A +LY ++ K      L T
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN ++ GL K    D+AL ++ ++    L+ +  ++NI +  L  C RM +A +      
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 601 CRGILPTTITWHILVRAVMNNGA 623
             G++P   T+ ++   ++  G+
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGS 706



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 262/512 (51%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P V++Y  +I    ++G L    A    + ++G   + + +  L+ G         A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E    P+V +YN ++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           ++G  K G+ + A   Y EM++ GI  D VTY+++I   C+A  + +  E+   M + G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + + ++YN ++ G   +G+  EAI   + +R      +  T+  L+N LCKNG   +A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +  +L++ M ++G + + +  N L+  + 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ +F +M + G +P VV Y T+I+ LCK     +A  + ++M+++G  P++I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+GLC   K D A +L  + L +G   +   +N +I   C  G+V ++ +L+  M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    P+++TYNTL+DG    G  D+A ++   ++   ++PDI++Y   + G C  SRM
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     + +  G+ P  IT++I+++ + + 
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHT 599



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 223/469 (47%), Gaps = 26/469 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V P V TY +
Sbjct: 39  ARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAI 97

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C+ GR D        + K     D+ T+   + GLC       A + V R M E 
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGKV 326
           G   D  +YN ++ G C   + +E  EL  +M    G     +VVSYN ++ G  + G  
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A S +  + ++    D  T+  +I  LCK   ++KA+++LN                 
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT---------------- 261

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K+G   +  T NS+++G+  + + + AI   K+M   G  P VV+Y++L+N LCK 
Sbjct: 262 --MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA      M ++G +PD+ TY  L+ G      +     L    ++ G  PD  ++
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NILI       KV+ A+ ++S M++    PN+V Y T++D L K+G  D A+  +  +++
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           E L P+II Y   + GLC+C +   A E + + L RGI   TI ++ ++
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 264/523 (50%), Gaps = 34/523 (6%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNS-MPDKALDVFQRM 99
           +H +L R I P +V + S I  L + Q      D A+ V+    KN  MPD         
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAM----DKAMEVLNTMVKNGVMPD-----CMTY 274

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N I        C   Q ++A   L  +   G++P+V +Y +++N L K+G    A  +FD
Sbjct: 275 NSILHG----YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M +RG+E ++  Y  L+ G+  KG  +    + + L++   + P+   +N++I    K 
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD-LMVRNGIQPDHHVFNILICAYAKQ 389

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            + D+ + ++ +M+++    +   Y + I  LCK+G+V+ A   + +M++ G+  + + Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 280 NAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
            ++I G C   K  +  EL  E++ R  CLN + +N +I    + G+V E+  +++L+  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                D  T+  LI+G C  G +++A ++L              AS+V+     G K + 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLL--------------ASMVSV----GVKPDI 551

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L+NG+ + S++++A+ LFKEM   G SP +++YN ++ GL    R   A      
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           + + G + ++ TY+++++GLC++   D AL++           +   +NI+I  L   G+
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +++A  L++       VP++ TY+ + + L + G  ++  +++
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 192/455 (42%), Gaps = 89/455 (19%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATR---EPGYAHSPHLFHHILRRLIDPKLVVHVS 58
           V++   L+N L        A  +FDS T+   EP  A     +  +L+       +V + 
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA----TYRTLLQGYATKGALVEMH 361

Query: 59  RILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGI 109
            +L+L+ ++    P+    ++ I AY K    D+A+ VF +M +         +G    +
Sbjct: 362 ALLDLM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV----------------------- 146
           LC+    + A  +   + ++GL P++  Y ++I+GL                        
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480

Query: 147 ------------KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                       K G ++ +  +FD M   GV+ +++ YN LIDG    G    A ++  
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM---------------------- 232
            +V    V P++VTY  +ING C+  R D+ L ++  M                      
Sbjct: 541 SMV-SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 233 -------------KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
                         K+  + +  TY   +HGLCK    + A R+++ +  + + ++  T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N MI    + G++ E  +L+      G + +V +Y+++   L+E G ++E   ++  + E
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             C+ADS     ++  L + G + +A   L  ++E
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 7/253 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G        +T   L+    +A +L+        + +KG     +++
Sbjct: 71  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M E G  PD+ +Y+ L+ GLC   +   AL+L     
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190

Query: 496 QK---GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
                G  PDV  YN +++G    G  + A   Y  M  R  +P++VTY++++  L K  
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             DKA+E+ N +++  + PD ++YN  L G CS  +  +A   L      G+ P  +T+ 
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310

Query: 613 ILVRAVMNNGAST 625
            L+  +  NG ST
Sbjct: 311 SLMNYLCKNGRST 323


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 257/519 (49%), Gaps = 25/519 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R++   K    L  + ++ +    Y+YGT + G+  SGDL GA  +  EM   G   NVV
Sbjct: 397 REKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVV 456

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI  F +K  +  A  + + +  E  + P+   YN +I GL K  + DE       
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEM-REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +N  + D+FTY +FI G  +AG    A++  +EM+E G+  + V    +I+ +C+ GK
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGK 575

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E    +  M  +G L +  +Y +L+ GL++NGKV++A  I+  +R K    D  ++G 
Sbjct: 576 VIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGT 635

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G  K G + KA  I +E                  M + G   N    N L+ GF +
Sbjct: 636 LIDGFSKLGNMQKASSIFDE------------------MVQAGLTSNVIIYNMLLGGFCR 677

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           + ++E A  L  EMS KG  P  V+Y T+I+G CK     EA+    EM  KG  PD   
Sbjct: 678 SGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L++G C+   ++ A+ +  +  +KG       +N LI+ +   GK E    + + + 
Sbjct: 738 YTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLM 796

Query: 531 K----RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
                +   PN VTYN ++D L K G+ + A E+++H+ +  L P +I+Y   L G    
Sbjct: 797 DGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKM 856

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            R S+ F   ++ +  GI P  I + +++ A +  G +T
Sbjct: 857 GRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTT 895



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 260/562 (46%), Gaps = 57/562 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++++ E AK  L  +   GL  D  +Y  +I+GL+K  +   A  +  EM   G   +
Sbjct: 290 LCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSID 349

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y+  I    K+G   +AK +++ ++    V P    Y  +I G  +     +  E+ 
Sbjct: 350 PMMYDYFICVMSKEGAMEKAKALFDGMIT-FGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +KK       +TY + + G+C +G+++GA  + +EM  SG   + V Y  +I  F + 
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   + + M  +G   +   YN LI GL +  K+DEA S    + E     D+ T+
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I+G  + G    A + + E+ E G                 +G++ +A S    M +
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +A T   LMNG ++  K+ +A  +F EM  KG +P V SY TLI+G  K+    +
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S   EM++ G   ++I Y++L+ G C+S +I+ A +L  +   KGF P+   Y  +I 
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW---------- 561
           G C +G + +A QL+  MK +  VP+   Y TL+DG  +  D ++A+ I+          
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASS 768

Query: 562 ------------------------NHILEERL----RPDIISYNITLKGLCSCSRMSDAF 593
                                   N +++       +P+ ++YNI +  LC    +  A 
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAK 828

Query: 594 EFLNDALCRGILPTTITWHILV 615
           E  +      ++PT IT+  L+
Sbjct: 829 ELFHHMQKANLMPTVITYTSLL 850



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 234/464 (50%), Gaps = 29/464 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + ++ ++A+ FL  + E G KPD ++YG  I+G +++G+   A     EM E GV  N
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V    LI+ + KKG  + A   +  +V E  +  +  TY V++NGL K G+ ++  E++
Sbjct: 560 KVLCTGLINEYCKKGKVIEACSAFRSMV-EQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      D F+Y + I G  K GN++ A  ++ EMV++G+  + + YN ++ GFCR+
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I++  EL + M  KG   N V+Y  +I G  ++G + EA  +++ ++ K    DS  +
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE----------------GRLADAASLVNRM--- 389
             L++G C+   + +AI I    E+G                  G+      ++NR+   
Sbjct: 739 TTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDG 798

Query: 390 --DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
             DK G K N  T N +++   +   LE A  LF  M +    PTV++Y +L+NG  K+ 
Sbjct: 799 SFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMG 857

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD----- 502
           R  E +S   E++  G +PD I YS++IN   +      AL L  Q   K    D     
Sbjct: 858 RRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLS 917

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           ++    L+ G    G++E A ++  NM +   +P+  T   L++
Sbjct: 918 ISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 268/592 (45%), Gaps = 44/592 (7%)

Query: 32  PGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV------IQAYGK 85
           P  A   HL   +L+R          +R+    ++ K     +V   V      I A+ +
Sbjct: 187 PSLARCNHLLDALLKR----------NRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCR 236

Query: 86  NSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           +     A DV  +  E  G            ++A     S+  KGL P   SY  +I+GL
Sbjct: 237 DGNVQLAKDVLLKTEEELGTAT------LNVDEALELKKSMSCKGLVPSRQSYNLLIDGL 290

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYP 204
            K   L  A ++  EM   G+  + V Y+ILIDG  K  +   A  +   +V    S+ P
Sbjct: 291 CKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDP 350

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
             + Y+  I  + K G  ++   ++D M        +  Y S I G  +  NV     + 
Sbjct: 351 --MMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            E+ +  I +   TY   + G C +G +   + + + MG  GC  NVV Y  LI+  L+ 
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            +  +A+ + + +RE+    D+  +  LI GL K   +++A   L E+ E          
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE---------- 518

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                   +G K +A+T  + ++G+I+A +  +A    KEM   G  P  V    LIN  
Sbjct: 519 --------NGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK  +  EA S  + M+E+G   D  TY++L+NGL ++ K++ A ++  +   KG  PDV
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  LI G    G ++ A  ++  M +     N++ YN L+ G  ++G+ +KA E+ + 
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  +   P+ ++Y   + G C    +++AF+  ++   +G++P +  +  LV
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLV 742



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 241/548 (43%), Gaps = 74/548 (13%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P +     +++ L+K   L     V+  M ER V  +V  Y +LI    + G+   AK
Sbjct: 185 LVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAK 244

Query: 191 EIW---------------ERLVMETS-----VYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           ++                E L ++ S     + P+  +YN++I+GLCK  R ++   +  
Sbjct: 245 DVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLV 304

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       D+  Y   I GL K  N + A  +  EMV  G  +D + Y+  I    + G
Sbjct: 305 EMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEG 364

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +++   L++ M   G      +Y  LI G      V +   +   ++++N      T+G
Sbjct: 365 AMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYG 424

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             + G+C +G L+ A  I+ E                  M   GC+ N     +L+  F+
Sbjct: 425 TAVKGMCSSGDLDGAYNIVKE------------------MGASGCRPNVVIYTTLIKTFL 466

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q S+  +A+ + KEM  +G +P    YN+LI GL K ++  EA SF+ EM+E G+KPD  
Sbjct: 467 QKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAF 526

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTP---------------------------- 501
           TY   I+G  ++ +   A K   + L+ G  P                            
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSM 586

Query: 502 -------DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
                  D   Y +L++GL   GKV DA +++  M+ +   P++ +Y TL+DG  K G+ 
Sbjct: 587 VEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNM 646

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KA  I++ +++  L  ++I YN+ L G C    +  A E L++   +G  P  +T+  +
Sbjct: 647 QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTI 706

Query: 615 VRAVMNNG 622
           +     +G
Sbjct: 707 IDGYCKSG 714



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 195/404 (48%), Gaps = 29/404 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +  +A     S+ E+G+  D  +Y  ++NGLVK+G +  A  +F EM  +G+  +V
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  LIDGF K G+  +A  I++ +V +  +  NV+ YN+++ G C+ G  ++  E+ D
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMV-QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ TYC+ I G CK+G++  A +++ EM   G+  D+  Y  ++DG CR  
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLRE----KNCNADS 345
            ++    ++E    KGC +  + +N LI  + + GK +    +   L +    K    + 
Sbjct: 750 DVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPND 808

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTC--- 401
            T+ ++I+ LCK G L  A ++ + +++      +    SL+N  DK G +   ++    
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868

Query: 402 -------------NSLMNGFIQASKLENAIFLFKEMSRK-----GCSPTVVSYNTLINGL 443
                        + ++N F++      A+ L  +M  K     GC  ++ +   L++G 
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGF 928

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            KV     A   V+ M+   + PD  T   LIN  C S    MA
Sbjct: 929 AKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 16/222 (7%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCS--PTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           L++G+I+   L+ A+F+F           P++   N L++ L K  R    +   K M+E
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE 217

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +    D+ +Y +LI   C+   + +A  +  +  ++  T  +               V++
Sbjct: 218 RNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLN--------------VDE 263

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+L  +M  +  VP+  +YN L+DGL K    + A  +   +    L  D ++Y+I + 
Sbjct: 264 ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILID 323

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           GL        A   +++ +  G     + +   +  +   GA
Sbjct: 324 GLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGA 365



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 43/238 (18%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW------------------KP 466
           S+K     + S++ L   LC      +A+S V  M+E+ W                  K 
Sbjct: 89  SQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKS 148

Query: 467 D--MITYSLLINGLCQSKKIDMALKL--CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           D  ++ + +LI+G  +   +D A+ +    + L     P +   N L+  L    +++  
Sbjct: 149 DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLF 208

Query: 523 LQLYSNMKKRNCVPNLVTYNTLM-------------DGLFKTGD--------CDKALEIW 561
             +Y  M +RN V ++ +Y  L+             D L KT +         D+ALE+ 
Sbjct: 209 WDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELK 268

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
             +  + L P   SYN+ + GLC   R+ DA   L +    G+    + + IL+  ++
Sbjct: 269 KSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLL 326


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 282/563 (50%), Gaps = 33/563 (5%)

Query: 92  ALD-VFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK---GLKPDVYSY 138
           A+D V +RM E+ GC   +         LC + + ++A   L+ + +    G  PDV SY
Sbjct: 146 AMDIVLRRMTEL-GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TV+NG  K GD   A + + EM +RG+  +VV Y+ +I    K     +A E+   +V 
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV- 263

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+ +TYN +++G C  G+  E +    +M+ +  E +  TY S ++ LCK G   
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A +++  M + G+  D  TY  ++ G+   G + E   L ++M R G   +   +NILI
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGE 376
               +  KVD+A+ ++  +R+   N +   +G +I+ LCK+G ++ A+    + ++EG  
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 377 GRLADAASLVN----------------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
             +    SL++                 M   G  LN    NS+++   +  ++  +  L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  M R G  P +++YNTLI+G C   +  EA   +  M+  G KPD++TY  LING C+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D AL L  + +  G +P++  YNI++ GL    +   A +LY ++ K      L T
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN ++ GL K    D+AL ++ ++    L+ +  ++NI +  L  C RM +A +      
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 601 CRGILPTTITWHILVRAVMNNGA 623
             G++P   T+ ++   ++  G+
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGS 706



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 262/512 (51%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P V++Y  +I    ++G L    A    + ++G   + + +  L+ G         A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E    P+V +YN ++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           ++G  K G+ + A   Y EM++ GI  D VTY+++I   C+A  + +  E+   M + G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + + ++YN ++ G   +G+  EAI   + +R      +  T+  L+N LCKNG   +A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +  +L++ M ++G + + +  N L+  + 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ +F +M + G +P VV Y T+I+ LCK     +A  + ++M+++G  P++I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+GLC   K D A +L  + L +G   +   +N +I   C  G+V ++ +L+  M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    P+++TYNTL+DG    G  D+A ++   ++   ++PDI++Y   + G C  SRM
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     + +  G+ P  IT++I+++ + + 
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHT 599



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 223/469 (47%), Gaps = 26/469 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V P V TY +
Sbjct: 39  ARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYAI 97

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C+ GR D        + K     D+ T+   + GLC       A + V R M E 
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGKV 326
           G   D  +YN ++ G C   + +E  EL  +M    G     +VVSYN ++ G  + G  
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A S +  + ++    D  T+  +I  LCK   ++KA+++LN                 
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT---------------- 261

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K+G   +  T NS+++G+  + + + AI   K+M   G  P VV+Y++L+N LCK 
Sbjct: 262 --MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA      M ++G +PD+ TY  L+ G      +     L    ++ G  PD  ++
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NILI       KV+ A+ ++S M++    PN+V Y T++D L K+G  D A+  +  +++
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           E L P+II Y   + GLC+C +   A E + + L RGI   TI ++ ++
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 264/523 (50%), Gaps = 34/523 (6%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNS-MPDKALDVFQRM 99
           +H +L R I P +V + S I  L + Q      D A+ V+    KN  MPD         
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAM----DKAMEVLNTMVKNGVMPD-----CMTY 274

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N I        C   Q ++A   L  +   G++P+V +Y +++N L K+G    A  +FD
Sbjct: 275 NSILHG----YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M +RG+E ++  Y  L+ G+  KG  +    + + L++   + P+   +N++I    K 
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD-LMVRNGIQPDHHVFNILICAYAKQ 389

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            + D+ + ++ +M+++    +   Y + I  LCK+G+V+ A   + +M++ G+  + + Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 280 NAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
            ++I G C   K  +  EL  E++ R  CLN + +N +I    + G+V E+  +++L+  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                D  T+  LI+G C  G +++A ++L              AS+V+     G K + 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLL--------------ASMVSV----GVKPDI 551

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L+NG+ + S++++A+ LFKEM   G SP +++YN ++ GL    R   A      
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           + + G + ++ TY+++++GLC++   D AL++           +   +NI+I  L   G+
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +++A  L++       VP++ TY+ + + L + G  ++  +++
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 196/468 (41%), Gaps = 89/468 (19%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATR---EPGYAHSPHLFHHILRRLIDPKLVVHVS 58
           V++   L+N L        A  +FDS T+   EP  A     +  +L+       +V + 
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA----TYRTLLQGYATKGALVEMH 361

Query: 59  RILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGI 109
            +L+L+ ++    P+    ++ I AY K    D+A+ VF +M +         +G    +
Sbjct: 362 ALLDLM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV----------------------- 146
           LC+    + A  +   + ++GL P++  Y ++I+GL                        
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480

Query: 147 ------------KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                       K G ++ +  +FD M   GV+ +++ YN LIDG    G    A ++  
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM---------------------- 232
            +V    V P++VTY  +ING C+  R D+ L ++  M                      
Sbjct: 541 SMV-SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 233 -------------KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
                         K+  + +  TY   +HGLCK    + A R+++ +  + + ++  T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N MI    + G++ E  +L+      G + +V +Y+++   L+E G ++E   ++  + E
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
             C+ADS     ++  L + G + +A   L  ++E      A  AS +
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFL 767



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 7/253 (2%)

Query: 380 ADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           A A S  NRM + G        +T   L+    +A +L+        + +KG     +++
Sbjct: 71  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130

Query: 437 NTLINGLCKVERFGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
             L+ GLC  +R  +A   V + M E G  PD+ +Y+ L+ GLC   +   AL+L     
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190

Query: 496 QK---GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
                G  PDV  YN +++G    G  + A   Y  M  R  +P++VTY++++  L K  
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             DKA+E+ N +++  + PD ++YN  L G CS  +  +A   L      G+ P  +T+ 
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310

Query: 613 ILVRAVMNNGAST 625
            L+  +  NG ST
Sbjct: 311 SLMNYLCKNGRST 323


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 255/510 (50%), Gaps = 20/510 (3%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAK 190
           +PD  ++   ++ L +   +  A+ +FD+M E      +VV YN LI G+ K GD  RA 
Sbjct: 86  QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL 145

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           +++ RL  E S  PN V+++ ++  LCK  R  + L ++  M     + D     + IH 
Sbjct: 146 DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHC 205

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            C+ G +  A R+   M       DA TY  +++  CRAG++ E     E+    GC L+
Sbjct: 206 TCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALS 265

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN +I+G +  G++ EA  ++E    K    D  T+ +LI  LCK+  L +A+ +  
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQ 324

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E E+GG                  GR A A  +   M K GC  +    N L++   +  
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K++ A+ L ++M+RKG  P   +YN +I+ L    R+ +AYSF   M  +   PD++TY+
Sbjct: 385 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 444

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L+NGL + ++ D A  L  +       PD+T +  LI  L  AG++EDAL+  + + K 
Sbjct: 445 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 504

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              PN   YN L+ G  ++G  DK  E++  ++E    PD I+Y I + G       S A
Sbjct: 505 GHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 564

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            E L + +  G  P   T+++L+R++   G
Sbjct: 565 MELLQEMVREGHTPALATYNVLIRSLSMAG 594



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 237/507 (46%), Gaps = 31/507 (6%)

Query: 67  QKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQ 115
           + C C  DV    ++I  Y K    D+ALD+F+R+ +   C+            LC+  +
Sbjct: 117 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 176

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
              A      +   GLK DV    T+I+   + G L  A  +   M       +   Y I
Sbjct: 177 ATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGI 236

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L++   + G         E L        + V YN +I G  +CGR  E  ++++     
Sbjct: 237 LVNAHCRAGQMHEVASFME-LARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTK 295

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           E   D FTY + +  LCK+  +E A  +++E  + G+ +D  TY+ ++D F +AG+  + 
Sbjct: 296 ESVPDVFTY-NLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKA 354

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            E++  M + GC+ + V YN+LI  L + GKVDEA+ + E +  K    D  T+ ++I+ 
Sbjct: 355 LEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 414

Query: 355 LCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRMDKHGCKLN 397
           L   G   KA      ++                      R  +A  L + M  + C  +
Sbjct: 415 LSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 474

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T  +L++   +A ++E+A+     + + G +P    YN LI+G C+  +  + Y   +
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+E    PD ITY++L+ G  +     MA++L  + +++G TP +  YN+LI  L  AG
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTL 544
           +VEDA  L+  M  +   P++ TY+ L
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 194/445 (43%), Gaps = 94/445 (21%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIK-------------------ECFELWEVMG 303
            Y+ ++++G+ VDA T  AM+   C+ G+ +                    C E  +  G
Sbjct: 5   TYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFG 64

Query: 304 RKGCL------------------NVVSYNILIRGLLENGKVDEAISIWELLREK-NCNAD 344
           R G L                  + V++   +  L E  +V++A+++++ +RE  +C  D
Sbjct: 65  RAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGE---------------------------- 376
              +  LI G CK G  ++A+ +   +++ G                             
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184

Query: 377 -------------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
                                    G L  A  L++ M  H C  +A+T   L+N   +A
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244

Query: 412 SKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            ++   +  F E++R  GC+ + V+YN +I G  +  R  EA    +  + K   PD+ T
Sbjct: 245 GQMHE-VASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFT 303

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+LLI  LC+SK+++ AL L  +  Q G   DV  Y+ L+     AG+   AL+++ NM+
Sbjct: 304 YNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ 362

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           K  C+P+ V YN L+  L K G  D+ALE+   +  + + PD  +YNI +  L SC R  
Sbjct: 363 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 422

Query: 591 DAFEFLNDALCRGILPTTITWHILV 615
            A+ F      R   P  +T++ L+
Sbjct: 423 KAYSFFGMMKRRKHSPDVVTYNTLL 447



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+  +K + + G      +   ++  +CK+ R       + E+ +KG     +T +  I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 477 GLCQSKKIDMALKLCCQFLQKGF-TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR-NC 534
              ++  +D A+ +     +  F  PD   +   +H LC   +VE A+ L+ +M++  +C
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAF 593
            P++V YNTL+ G  K GD D+AL+++  + +E   +P+ +S++  +  LC  SR +DA 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 594 EFLNDALCRGI 604
               + L  G+
Sbjct: 182 AVFQEMLGAGL 192


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 254/484 (52%), Gaps = 24/484 (4%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           A  LC   +  +A   +  +  +G  P+V +Y T+I GL     +  A  +F  M + G 
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGR 221
             N V Y  LI G  + G+   A ++ + ++ + S Y     P V+TY+++I+GLCK GR
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            DE  E+++ MK      D  +Y + IHG C AG  + ++ ++ EMV+ G+  D VT++ 
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +ID  C+ GK+ E  +L EVM ++G + N+++YN LI G    G ++ A  ++  +  K 
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              D  ++  LING CK   + +A+ + NE+ + G+                    N  T
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP------------------NVTT 414

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             +L+ G  Q  K+ +A  LF  M   G S     Y   ++GLCK +   EA     E+ 
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
              +K ++  YS LI+GLC++ K++ A +L  +  Q+G  PDV  YNI+IHG C  G+V+
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A  L+  M++  C P+++ YNTL+ G  +    ++ +++ + ++++ + P+  S  I +
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594

Query: 581 KGLC 584
             LC
Sbjct: 595 DMLC 598



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 254/507 (50%), Gaps = 30/507 (5%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A  F + +      P + S+  ++ GL K        ++++EM   G+  ++   +IL 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 178 DGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +      +  R  E    +  ++     PNVVTY  +I GLC   R  E   ++ RM+K 
Sbjct: 134 NCL---CNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKL 190

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMV----ESGIFVDA--VTYNAMIDGFCRA 289
               ++ TY + I GLC+ GNV  A ++++EM+    + G+      +TY+ +IDG C+ 
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV 250

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  E  EL+E M  +G + +V+SY+ LI G    GK D++  +++ + ++    D  T 
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLI+ LCK                  EG++ +A  L+  M + G   N  T NSL++GF
Sbjct: 311 SVLIDTLCK------------------EGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                L +A  LF  M  KG  P  +SY TLING CK  +  EA +   EML+ G  P++
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY  L+ GL Q  K+  A KL       G + +  +Y I + GLC    + +A++L++ 
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +K  N   N+  Y+ L+DGL K G  + A E++  + +E L+PD+++YNI + G C   +
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           + +A          G  P  I ++ L+
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLL 559



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 224/444 (50%), Gaps = 60/444 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A R    + + G  P+  +YGT+I GL ++G++  AL +  EM     +  
Sbjct: 171 LCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYG 230

Query: 170 VVC------YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           V C      Y+I+IDG  K G    AKE++E +  +  + P+V++Y+ +I+G C  G++D
Sbjct: 231 VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMI-PDVISYSTLIHGFCCAGKWD 289

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           +   ++D M     + D  T+   I  LCK G V  A+++   M++ GI  + +TYN++I
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349

Query: 284 DGFCRAGKIKECFELWEVMGRKG------------------------------------C 307
           DGFC  G +    EL+  M  KG                                     
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV +Y  L++GL + GKV +A  ++ +++    +A+S  +G+ ++GLCKN  L +A+++
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            NE++                     G+L  A  L  ++ + G + +  T N +++GF +
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +++NA  LF++M   GC+P +++YNTL+ G C+  +  E    + +M++K   P+  +
Sbjct: 530 VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS 589

Query: 471 YSLLINGLCQSKKIDMALKLCCQF 494
            +++++ LC+ +K    + L  +F
Sbjct: 590 CTIVVDMLCKDEKYKKFVDLLPKF 613



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 24/446 (5%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           L+M +   P + ++N ++ GL K   + +   +++ M+      D FT     + LC   
Sbjct: 81  LMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVN 140

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            V  A      ++  G   + VTY  +I G C   +I E   L+  M + GC  N V+Y 
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200

Query: 315 ILIRGLLENGKVDEAISIW-ELLREK-----NCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            LI+GL + G V+ A+ +  E+L +      NC     T+ ++I+GLCK G  ++A ++ 
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E++  G                  G+   +  L + M   G + +  T + L++   + 
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K+  A  L + M ++G  P +++YN+LI+G C V     A      M  KG +PD I+Y
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LING C++ K+  A+ L  + LQ G +P+VT Y  L+ GL   GKV DA +L+  MK 
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                N   Y   +DGL K     +A+E++N +     + +I +Y+  + GLC   ++  
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLET 500

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
           A+E        G+ P  +T++I++  
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHG 526



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 208/410 (50%), Gaps = 19/410 (4%)

Query: 217 CKCGRFD--ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           CK G     +    +D M ++       ++   + GL K  +      +Y EM  +G+  
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           D  T + + +  C   ++ E       + R+G + NVV+Y  LI+GL    ++ EA  ++
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             +++  C  ++ T+G LI GLC+ G +N A+++  E              ++N   ++G
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE--------------MLNDASQYG 230

Query: 394 --CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             CK    T + +++G  +  + + A  LF+EM  +G  P V+SY+TLI+G C   ++ +
Sbjct: 231 VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQ 290

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +     EM+++G +PDM+T+S+LI+ LC+  K+  A KL    +Q+G  P++  YN LI 
Sbjct: 291 SKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID 350

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G +  A +L+ +M  +   P+ ++Y TL++G  KT    +A+ ++N +L+    P
Sbjct: 351 GFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           ++ +Y   LKGL    ++ DA +        G+   +  + I +  +  N
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 194/396 (48%), Gaps = 28/396 (7%)

Query: 237 REKDSFTY-CSFIHGLCKAGNVEG--AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           RE+ SF +  S     CK GN+    A   +  M+ S       ++N ++ G  +     
Sbjct: 49  REEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYS 108

Query: 294 ECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           + F L+  M   G   ++ + +IL   L    +V EA++    +  +    +  T+  LI
Sbjct: 109 QLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLI 168

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            GLC                   E R+++A  L  RM K GC  NA T  +L+ G  Q  
Sbjct: 169 KGLCM------------------EHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210

Query: 413 KLENAIFLFKEM----SRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            +  A+ L KEM    S+ G  C P V++Y+ +I+GLCKV R  EA    +EM  +G  P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+I+YS LI+G C + K D +  L  + + +G  PD+  +++LI  LC  GKV +A +L 
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M +R  VPNL+TYN+L+DG    GD + A E++  +  + L PD ISY   + G C  
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++ +A    N+ L  G  P   T+  L++ +   G
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 6/230 (2%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N L+ G  + +       L+ EM   G SP + + + L N LC V R  EA + +  +L 
Sbjct: 95  NRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILR 154

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G+ P+++TY+ LI GLC   +I  A +L  +  + G TP+   Y  LI GLC  G V  
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI 214

Query: 522 ALQLYSNMKKR------NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           AL+L+  M         NC P ++TY+ ++DGL K G  D+A E++  +  + + PD+IS
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           Y+  + G C   +   +    ++ + +G+ P  +T+ +L+  +   G  T
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVT 324



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 1/154 (0%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           ++I+G     LC+     +A    N L     K ++ +Y  +I+GL K+G L  A  +F+
Sbjct: 447 SQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE 506

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++ + G++ +VV YNI+I GF K G    A  ++E++  E    P+++ YN ++ G C+ 
Sbjct: 507 KLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM-EENGCTPDIIAYNTLLCGFCEG 565

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            + +E +++  +M + +   ++ +    +  LCK
Sbjct: 566 NKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 260/511 (50%), Gaps = 25/511 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++++ EKA   L  +     +P+ ++Y  +++GL K G +  A+ +  EM  +G+E +
Sbjct: 20  LCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVD 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LI GF  KG   R K +++ + +E  + PNVV Y+ +ING CK G + E   + 
Sbjct: 80  VVVYSTLISGFCSKGCLDRGKALFDEM-LEKGISPNVVVYSCLINGFCKKGLWREATAVL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +   + D +TY   I GLCK G    A  ++  M E G     VTYN +I+G C+ 
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADST 346
           G I + F+++E M  KG  L VVSYN LI GL  NGK+DEA+ ++  L E       D  
Sbjct: 199 GCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVI 258

Query: 347 THGVLINGLCKNGYLNKAIQILNE-VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           T   +I GLCK G L+KA++I +  +E G  G                   N +TC+ L+
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG-------------------NLFTCHILI 299

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
             +I++  ++ A+ L+K + + G  P+  +Y+ +I+G CK+     A      M   G  
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P +  Y+ L+  LC+   ++ A +L  +  +    PD   +NI+I G   AG +  A +L
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            ++M++    P+  TY++ ++ L K G  ++A   ++ ++   + PD   Y+  +KG   
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479

Query: 586 CSRMSDAFEFLNDALCRG-ILPTTITWHILV 615
              + +    L      G IL   IT  IL 
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILT 510



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 218/435 (50%), Gaps = 20/435 (4%)

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           ++ P++V+YN +INGLCK  R ++ +++   M+ +  E +SFTYC  + GLCK G VE A
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
            R+  EM   G+ VD V Y+ +I GFC  G +     L++ M  KG   NVV Y+ LI G
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--- 376
             + G   EA ++   + E+    D  T+  +I GLCK+G   KA+ + + + E GE   
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 377 --------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G + DA  +   M + G +L   + N+L+ G     KL+ A+ LF 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 423 EMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            +   G    P V+++NT+I GLCK  R  +A      M+E+G   ++ T  +LI    +
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           S  ID A++L  +  + G  P  T Y+++I G C    +  A  L+S MK     P L  
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YNTLM  L K    ++A  ++  + E    PD IS+NI + G      +  A E LND  
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424

Query: 601 CRGILPTTITWHILV 615
             G+ P   T+   +
Sbjct: 425 QMGLTPDAYTYSSFI 439



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 203/390 (52%), Gaps = 21/390 (5%)

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK+     D  +Y + I+GLCK   +E A  +  EM  S    ++ TY  ++DG C+ G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++E   L   M RKG  ++VV Y+ LI G    G +D   ++++ + EK  + +   +  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LING CK G   +A  +L                  + M + G + + YT   ++ G  +
Sbjct: 121 LINGFCKKGLWREATAVL------------------HTMTERGIQPDVYTYTCMIGGLCK 162

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +   A+ LF  M+ KG  P+ V+YN LINGLCK    G+A+   + MLEKG + ++++
Sbjct: 163 DGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           Y+ LI GLC + K+D A+KL    L+ G    PDV  +N +I GLC  G+++ A+++Y  
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +R    NL T + L+    K+G  DKA+E+W  + +  L P   +Y++ + G C    
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           ++ A    +     G+ PT   ++ L+ ++
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASL 372



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 248/530 (46%), Gaps = 50/530 (9%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           E N  T   L D   +E     +  L   + R+ ++  +VV+ +                
Sbjct: 42  EPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYST---------------- 85

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSL 126
               +I  +      D+   +F  M E        ++ C     C+K  + +A   L+++
Sbjct: 86  ----LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            E+G++PDVY+Y  +I GL K G    AL +FD M E+G E + V YN+LI+G  K+G  
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK--NEREKDSFTY 244
             A +I+E + +E      VV+YN +I GLC  G+ DE ++++  + +  N  E D  T+
Sbjct: 202 GDAFKIFETM-LEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF 260

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + I GLCK G ++ A  +Y  M+E G F +  T + +I  + ++G I +  ELW+ + +
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G + +  +Y+++I G  +   ++ A  ++  ++    +     +  L+  LCK   L +
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQ 380

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A ++  E++E                    C+ +  + N +++G ++A  + +A  L  +
Sbjct: 381 ARRLFQEMKE------------------SNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M + G +P   +Y++ IN L K+ +  EA      M+  G  PD   Y  LI G   + +
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           I+  + L  Q    G   D+ + N ++  LC++ +    ++L  N    +
Sbjct: 483 IEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSES 532



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 148/289 (51%), Gaps = 20/289 (6%)

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           ++  N   D  ++  +INGLCK   L KA+ +L E                  M+   C+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVE------------------MEGSSCE 42

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N++T   LM+G  +  ++E A+ L  EM RKG    VV Y+TLI+G C         + 
Sbjct: 43  PNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKAL 102

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
             EMLEKG  P+++ YS LING C+      A  +     ++G  PDV  Y  +I GLC 
Sbjct: 103 FDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCK 162

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G+   AL L+  M ++   P+ VTYN L++GL K G    A +I+  +LE+  R +++S
Sbjct: 163 DGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRG--ILPTTITWHILVRAVMNNG 622
           YN  + GLC+  ++ +A +  +  L  G  + P  IT++ +++ +   G
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEG 271



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 40/327 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC   + ++A +  +SL E G  ++PDV ++ TVI GL K G L  A+ ++D M ERG  
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N+   +ILI  + K G   +A E+W+R V +  + P+  TY+VMI+G CK    +    
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKR-VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKG 348

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ RMK +      F Y + +  LCK  ++E A R+++EM ES    D +++N MIDG  
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408

Query: 288 RAGKIKECFELWEVMGRKGC----------LNVVS------------------------- 312
           +AG I    EL   M + G           +N +S                         
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNH 468

Query: 313 -YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-NE 370
            Y+ LI+G   N +++E I++   + +     D      ++  LC +      +++L N 
Sbjct: 469 VYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNF 528

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLN 397
             E   G       L+ ++ K   KL 
Sbjct: 529 SSESSGGTSISCDKLLMKIQKFNPKLQ 555


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 265/524 (50%), Gaps = 34/524 (6%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
               A+RFL+S+   G+ P+VY+Y  ++  L   G L  A+ V  +M   G   N V YN
Sbjct: 132 SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYN 191

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            L+  F + G+   A+ +   +  E +  PN+VT+N M+NGLCK GR +   +++D M +
Sbjct: 192 TLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D  +Y + + G CK G +  +  V+ EM + G+  D VT+ ++I   C+AG +++
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L   M  +G  +N V++  LI G  + G +D+A+   E +R+         +  LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G CK G ++ A +++ E                  M+    K +  T +++++G+ +   
Sbjct: 372 GYCKLGRMDLARELIRE------------------MEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L++A  L ++M +KG  P  ++Y++LI GLC+ +R  +A    + ML+ G +PD  TY+ 
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G C+   ++ AL L  + ++KG  PDV  Y++LI+GL  + + ++A +L   +   +
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 534 CVPNLVTYNTLM----DGLFKT------GDCDKAL-----EIWNHILEERLRPDIISYNI 578
            VP+ + Y+ LM       FK+      G C K L     +++  +L+   + D   Y+I
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G C    +  A  F    L  G  P + +   LVR +   G
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 237/461 (51%), Gaps = 25/461 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V +Y  V+  L     L  A      M   GV  NV  YNIL+     +G    A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF-TYCSFI 248
             +   +       PN VTYN ++   C+ G  D    +   M++    K +  T+ S +
Sbjct: 172 VGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +GLCKAG +EGA +V+ EMV  G+  D V+YN ++ G+C+ G + E   ++  M ++G +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV++  LI    + G +++A+++   +RE+    +  T   LI+G CK G+L+     
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD----- 345

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                        DA   V  M K G + +    N+L+NG+ +  +++ A  L +EM  K
Sbjct: 346 -------------DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P VV+Y+T+I+G CKV     A+   ++ML+KG  PD ITYS LI GLC+ K+++ A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L    LQ G  PD   Y  LI G C  G VE AL L+  M ++  +P++VTY+ L++G
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           L K+    +A  +   +  E   PD I Y+  +  LC CS+
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LC-CSK 550



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 244/487 (50%), Gaps = 38/487 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VET 168
           LC + + E+A   +  +   G  P+  +Y T++    ++G+L GA  V   M E G  + 
Sbjct: 162 LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP 221

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+V +N +++G  K G    A+++++ +V E  + P+VV+YN +++G CK G   E L +
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D  T+ S IH  CKAGN+E A  +  +M E G+ ++ VT+ A+IDGFC+
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + +     E M + G   +VV YN LI G  + G++D A  +   +  K    D  T
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  +I+G CK G L+ A Q+  ++ + G                 E RL DA  L   M 
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + + +T  +L++G  +   +E A+ L  EM RKG  P VV+Y+ LINGL K  R  
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 451 EAYSFVKEMLEKGWKPDMITYS---------------LLINGLCQSKKIDMALKLCCQFL 495
           EA+  + ++  +   PD I Y                 L+ G C    +  A K+    L
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG--- 552
            + +  D ++Y+ILIHG C  G V  AL  +  M +    PN  +  +L+ GLF+ G   
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 553 DCDKALE 559
           + D A++
Sbjct: 641 EADNAIQ 647



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 58/271 (21%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRF 122
           P+ V  S +I  Y K    D A  + Q+M +       I        LC +++   A   
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             ++ + G++PD ++Y T+I+G  K G++  AL++ DEM  +GV  +VV Y++LI+G  K
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515

Query: 183 KGDYMRAKEIWERLVMETSVYPNV------------------------------------ 206
                 A  +  +L  E  V  N+                                    
Sbjct: 516 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 575

Query: 207 -------------VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
                          Y+++I+G C+ G   + L    +M ++    +S +  S + GL +
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 635

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            G V  A+   ++++      DA    A+ID
Sbjct: 636 EGMVVEADNAIQDLLTCCPLADAEASKALID 666


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 252/487 (51%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +G ++  LVK      A+++  +M  +G+E ++V  +ILI+ F   G    +  +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    PN +    ++ GLC  G   + L   D++     + +  +Y + ++GLC
Sbjct: 190 LGK-ILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G    A ++ R + +     D V YN +IDG C+   + E ++ +  M  +G   +V+
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI G    G++  A S+   +  KN N D  T+ +LI+ LCK              
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK-------------- 354

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+L +A +L+  M K G K N  T ++LM+G+    ++ NA  +F  M +   +P
Sbjct: 355 ----EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           +V SYN +INGLCK +   EA + ++EML K   P+ +TY+ LI+GLC+S +I  AL L 
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y  L+ GLC    ++ A+ L+  MK+R   PN  TY  L+DGL K 
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
                A +++ HIL +    D+ +YN+ + GLC    + +A    +     G +P  +T+
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590

Query: 612 HILVRAV 618
            I++R++
Sbjct: 591 EIIIRSL 597



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 247/503 (49%), Gaps = 55/503 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN------------------- 143
           FG   G L + + F  A      +  KG++PD+ +   +IN                   
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKIL 194

Query: 144 ----------------GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
                           GL   G++  +L   D++  +G + N V Y  L++G  K G+  
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++  R++ + S  P+VV YN +I+GLCK    +E  + +  M       D  TY + 
Sbjct: 255 CAIKLL-RMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTL 313

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G C AG + GA  +  EM    I  D  TY  +ID  C+ GK+KE   L  VM ++G 
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             NVV+Y+ L+ G    G+V  A  I+  + +   N    ++ ++INGLCK   +++A+ 
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMN 433

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L E                  M       N  T NSL++G  ++ ++ +A+ L KE+  
Sbjct: 434 LLRE------------------MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G    V++Y +L++GLCK +   +A +   +M E+G +P+  TY+ LI+GLC+  ++  
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKN 535

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A KL    L KG   DV  YN++I GLC  G +++AL + S M+   C+P+ VT+  ++ 
Sbjct: 536 AQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIR 595

Query: 547 GLFKTGDCDKALEIWNHILEERL 569
            LF+  + DKA ++ + ++ + L
Sbjct: 596 SLFEKDENDKAEKLLHEMIAKGL 618



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 213/412 (51%), Gaps = 21/412 (5%)

Query: 90  DKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           DK +    +MN++ +G     LC+  +   A + L  + ++  +PDV  Y T+I+GL K 
Sbjct: 226 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
             +  A   + EM  RG+  +V+ Y+ LI GF   G  M A  +   + ++ ++ P+V T
Sbjct: 286 KLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDVYT 344

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y ++I+ LCK G+  E   +   M K   + +  TY + + G C  G V  A++++  MV
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           ++ +     +YN MI+G C+   + E   L   M  K  + N V+YN LI GL ++G++ 
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
            A+ + + L  +   AD  T+  L++GLCKN  L+KAI                  +L  
Sbjct: 465 SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI------------------ALFM 506

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +M + G + N YT  +L++G  + ++L+NA  LF+ +  KGC   V +YN +I GLCK  
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEG 566

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
              EA +   +M + G  PD +T+ ++I  L +  + D A KL  + + KG 
Sbjct: 567 MLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 169/334 (50%), Gaps = 17/334 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +++ +  ++  L++      AIS+ + +  K    D  T  +LIN  C  G +  +  +L
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            ++ + G                 +G +  +    +++   G ++N  +  +L+NG  + 
Sbjct: 191 GKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKI 250

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +   AI L + +  +   P VV YNT+I+GLCK +   EAY F  EM  +G  PD+ITY
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITY 310

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S LI G C + ++  A  L  +   K   PDV  Y ILI  LC  GK+++A  L   M K
Sbjct: 311 STLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTK 370

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               PN+VTY+TLMDG    G+   A +I++ +++  + P + SYNI + GLC    + +
Sbjct: 371 EGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDE 430

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           A   L + L + ++P T+T++ L+  +  +G  T
Sbjct: 431 AMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 111/202 (54%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           + +A+  F  M     +P+++ +  ++  L K++ F  A S  K+M  KG +PD++T S+
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C   ++  +  +  + L+ G+ P+  +   L+ GLC  G+V+ +L  +  +  + 
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N V+Y TL++GL K G+   A+++   I +   RPD++ YN  + GLC    +++A+
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 594 EFLNDALCRGILPTTITWHILV 615
           +F  +   RGI P  IT+  L+
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLI 314



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +  ++A   L  +  K + P+  +Y ++I+GL KSG +  AL +  E+  RG   +
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ Y  L+DG  K  +  +A  ++ ++  E  + PN  TY  +I+GLCK  R     +++
Sbjct: 482 VITYTSLLDGLCKNQNLDKAIALFMKM-KERGIQPNKYTYTALIDGLCKGARLKNAQKLF 540

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +       D +TY   I GLCK G ++ A  +  +M ++G   DAVT+  +I      
Sbjct: 541 QHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEK 600

Query: 290 GKIKECFELWEVMGRKGCLNVVSYN 314
            +  +  +L   M  KG L+  +++
Sbjct: 601 DENDKAEKLLHEMIAKGLLHFRNFH 625



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 10/136 (7%)

Query: 72  PEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKR 121
           P DV    S++    KN   DKA+ +F +M E         +      LC+  + + A++
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               +  KG   DVY+Y  +I GL K G L  ALA+  +M + G   + V + I+I   F
Sbjct: 539 LFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLF 598

Query: 182 KKGDYMRAKEIWERLV 197
           +K +  +A+++   ++
Sbjct: 599 EKDENDKAEKLLHEMI 614



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 26/215 (12%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           + KG  P +V+ + LIN L  + +   ++S + ++L+ G++P+ IT + L+ G     + 
Sbjct: 3   AAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ET 57

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK---------------------VEDAL 523
             A+KL      +   P + + + L H + +                        V DA+
Sbjct: 58  RCAIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAV 117

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             ++ M      P+++ +  ++  L K      A+ +   +  + + PD+++ +I +   
Sbjct: 118 SQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCF 177

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           C   +M+ +F  L   L  G  P TI    L++ +
Sbjct: 178 CHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGL 212



 Score = 39.7 bits (91), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/125 (19%), Positives = 52/125 (41%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           TP +  +  ++  L        A+ L   M+ +   P+LVT + L++     G    +  
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +   IL+   +P+ I     +KGLC    +  +  F +  + +G     +++  L+  + 
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 620 NNGAS 624
             G +
Sbjct: 249 KIGET 253


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 261/530 (49%), Gaps = 59/530 (11%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G     +S+ +++  LV+      A  +F        E +V  YNI+I GF   GD   A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 190 KEIWERL---------VMETSVY----------------------PNVVTYNVMINGLCK 218
            E+ E +            T +                       PNVVTY  +I    +
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             + +E +++ + M++     +  TY   +  LCK   V  A+ V ++M+E G   + +T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +N+++DGFC+ G + +  +L  +M  KG   NVV+Y+ LI GL ++ K  EA  + E ++
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +    D+ T+  LI+GLCK   + +A Q+L                   RM   GC  +
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQML------------------RRMAGSGCTPD 353

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               +S+++ F ++ KL  A    +EM ++  SP VV+YNT+I+GLCK+ +  EA   ++
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413

Query: 458 EMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +M E G   PD++TYS +INGLC+S  +  A KL  +  + G  PDV  Y  +I GLC  
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 473

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G++E+A  L   MK+  C PN+VTY TL+ GL K    D+A  +   +      P++++Y
Sbjct: 474 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 533

Query: 577 NITLKGLCSCSRMSDAFEFLN-----DALCRGILPTTITWHILVRAVMNN 621
           N  + GLC   R+ +A + +       A C    P   T+  +V A+M++
Sbjct: 534 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECS---PDAATYRTIVNALMSS 580



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 257/509 (50%), Gaps = 25/509 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L R ++  +A     S      +PDV SY  VI+G   +GDL  AL + +EM   G   
Sbjct: 86  VLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAP 145

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +   +  +I      GD   A +    +  +    PNVVTY  +I    +  + +E +++
Sbjct: 146 DAFTHTPIITAMANAGDLDGAMDHLRSMGCD----PNVVTYTALIAAFARAKKLEEAMKL 201

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + M++     +  TY   +  LCK   V  A+ V ++M+E G   + +T+N+++DGFC+
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + +  +L  +M  KG   NVV+Y+ LI GL ++ K  EA  + E ++ +    D+ T
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  LI+GLCK   + +A Q+L  +   G                  G+L +A   +  M 
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVVSYNTLINGLCKVERF 449
           K     +  T N++++G  +  K+  A  + ++M   G   P VV+Y+T+INGLCK +  
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   +  M + G  PD++TY+ +I+GLC+  +++ A  L     + G  P+V  Y  L
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GLC A KV++A ++   M+   C PNLVTYNT+++GL  +G   +A ++   + + R 
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRA 561

Query: 570 R--PDIISYNITLKGLCSCSRMSDAFEFL 596
              PD  +Y   +  L S   + +A + L
Sbjct: 562 ECSPDAATYRTIVNALMSSDLVQEAEQLL 590



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 251/503 (49%), Gaps = 24/503 (4%)

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           G V+N L K   L  A   +      G       +N L+    +   +  A +++ R  +
Sbjct: 47  GRVVNSL-KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLF-RSEL 104

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
             S  P+V +YN++I+G C  G     LE+ + MK      D+FT+   I  +  AG+++
Sbjct: 105 LASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD 164

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
           GA    R M   G   + VTY A+I  F RA K++E  +L E M  +GC  N+V+YN+L+
Sbjct: 165 GAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 221

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
             L +   V  A  + + + E     +  T   L++G CK G ++ A ++L  +   G  
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 281

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                            +  +A  ++  M   G   +A+T ++L++G  +A K+E A  +
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            + M+  GC+P VV Y+++I+  CK  +  EA   ++EM ++   PD++TY+ +I+GLC+
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 481 SKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
             KI  A  +  Q  + G   PDV  Y+ +I+GLC +  + +A +L   M K  C P++V
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY T++DGL K G  ++A  +   +      P++++Y   + GLC   ++ +A   + + 
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
              G  P  +T++ +V  +  +G
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSG 544



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 230/467 (49%), Gaps = 73/467 (15%)

Query: 61  LELIEIQKC--YCPEDVA-LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL------- 110
           LEL+E  K   + P+      +I A       D A+D  + M    GC+  ++       
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM----GCDPNVVTYTALIA 187

Query: 111 --CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
              R ++ E+A + L  + E+G  P++ +Y  +++ L K   +  A  V  +M E G   
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 247

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NV+ +N L+DGF K+G+   A+++   +V +  + PNVVTY+ +I+GLCK  +F E  E+
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAK-GMRPNVVTYSALIDGLCKSQKFLEAKEV 306

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + MK      D+FTY + IHGLCKA  +E AE++ R M  SG   D V Y+++I  FC+
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366

Query: 289 AGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK-NCNADST 346
           +GK+ E  + L E+  ++   +VV+YN +I GL + GK+ EA  I E ++E  +   D  
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRM 389
           T+  +INGLCK+  L +A ++L+ + + G                  GRL +A  L+  M
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV--------------- 434
            + GC  N  T  +L++G  +A K++ A  + +EM   GC P +V               
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 435 ----------------------SYNTLINGLCKVERFGEAYSFVKEM 459
                                 +Y T++N L   +   EA   +++M
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 147/266 (55%), Gaps = 3/266 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E+A++ L  +   G  PDV  Y ++I+   KSG LL A     EM ++    +
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +IDG  K G    A+ I E++     V P+VVTY+ +INGLCK     E  ++ 
Sbjct: 389 VVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM K     D  TY + I GLCK G +E AE + + M  +G   + VTY  +I G C+A
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE--KNCNADST 346
            K+ E   + E M   GC  N+V+YN ++ GL  +G++ EA  + + +++    C+ D+ 
Sbjct: 509 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAA 568

Query: 347 THGVLINGLCKNGYLNKAIQILNEVE 372
           T+  ++N L  +  + +A Q+L +++
Sbjct: 569 TYRTIVNALMSSDLVQEAEQLLEQMK 594


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 265/547 (48%), Gaps = 56/547 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  Q E A+R   ++    + P+ Y+Y  V+  L   G +  ALAV DEM  RG     
Sbjct: 101 CRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP 157

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL-----------------------VMETSVY---- 203
             Y+++++   + G +  A  + E L                        ++ +++    
Sbjct: 158 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRD 217

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                  P+VV+YN ++ GLC   R+    E+ + M +     +  T+ + I  LC+ G 
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E    V  +M E G   D   Y  +IDG C+ G +K   E+   M   G   NVV YN 
Sbjct: 278 FERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNT 337

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L++GL    + +E   +   + +K+C  D  T  +L++  C+NG +++ I++L +     
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ----- 392

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M  HGC  +  T  +++NGF +   ++ A+ L K M+  GC P  +S
Sbjct: 393 -------------MLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  ++ GLC  ER+ +A   + +M+++G   + IT++ LIN LC+   ++ A++L  Q L
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G +PD+  Y+ +I GL  AGK ++AL+L + M  +   PN + Y+++   L + G  +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           K ++++++I +  +R D + YN  +  LC       A EFL   +  G +P   T+ IL+
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619

Query: 616 RAVMNNG 622
           R + + G
Sbjct: 620 RGLASEG 626



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 252/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  A R L  L  +G   DV +   V+N +   G +  AL +  ++   G E +V
Sbjct: 168 CRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDV 227

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ E +V   +  PN+VT+N +I+ LC+ G F+   E+  
Sbjct: 228 VSYNAVLKGLCMAKRWGCVQELMEEMV-RMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G+++ A  +   M   G+  + V YN ++ G C A 
Sbjct: 287 QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E  EL   M  K C L+ V++NIL+    +NG VD  I + E +    C  D  T+ 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYT 406

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 407 TVINGFCKEGLIDEAVMLLKS------------------MTACGCKPNTISYTIVLKGLC 448

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC    +++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K D AL+L    + KG +P+  +Y+ +   L   G++   +Q++ N+
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +      + V YN ++  L K G+ ++A+E   +++     P+  +Y I ++GL S   +
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L +   +G L   +  H
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKH 651



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 208/467 (44%), Gaps = 56/467 (11%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN M+ G C+ G+ +    +   +       +++TY   +  LC  G +  A  V  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPV---PPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             G       Y+ +++  CR G  +    + E +  +GC L+V + N+++  + + G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 328 EAISIWELLREKNCNADSTTHGVLING--------------------------------- 354
           +A+ +   L    C  D  ++  ++ G                                 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 355 --LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
             LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  +G K
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    N+L+ G   A + E    L  EM  K C    V++N L++  C+          
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           +++ML  G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ GLCS
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           A +  DA  L S M ++ C  N +T+NTL++ L K G  ++A+E+   +L     PD+IS
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y+  + GL    +  +A E LN  + +G+ P TI +  +  A+   G
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 22/390 (5%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S I  LC AG    A R              V YNAM+ G+CRAG+++    L   +   
Sbjct: 63  SLIRSLCAAGRTAEAARALSAAGGG---AGVVAYNAMVAGYCRAGQLESARRLAAAVPVP 119

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N  +Y  ++R L   G++ +A+++ + +  + C      + V++   C+ G    A+
Sbjct: 120 P--NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           ++L ++   G                 +G +  A  L+  +   GC+ +  + N+++ G 
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A +      L +EM R  C P +V++NTLI+ LC+   F   +  + +M E G  PD+
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +I+G+C+   + +A ++  +    G  P+V  YN L+ GLCSA + E+  +L + 
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  ++C  + VT+N L+D   + G  D+ +E+   +L     PD+I+Y   + G C    
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + +A   L      G  P TI++ I+++ +
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGL 447



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 2/270 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    ++    L  +   G  PDV +Y TVING  K G +  A+ +   M   G + N
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y I++ G      ++ A+++  +++ +     N +T+N +IN LCK G  ++ +E+ 
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFNTLINFLCKKGLVEQAIELL 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  N    D  +Y + I GL KAG  + A  +   MV  G+  + + Y+++     R 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I +  ++++ +       + V YN +I  L + G+ + AI     +    C  + +T+
Sbjct: 556 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            +LI GL   G++ +A ++L E+   G  R
Sbjct: 616 TILIRGLASEGFVKEAQEMLTELCSKGALR 645



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 3/118 (2%)

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN ++ G C AG++E A +L + +      PN  TY  ++  L   G    AL + + + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
                P    Y++ L+  C       A   L D   RG        ++++ A+ + G+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 288/603 (47%), Gaps = 61/603 (10%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLW 127
           ++ I+AY +      A+D F+RM ++F C             L      ++A +    + 
Sbjct: 54  VASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 128 EKGLKPDVYS-------------------------------YGTVINGLVKSGDLLGALA 156
             G+ PD+++                               Y TV+ GL   G    A  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +FD+M    V  N+  +N ++    K+GD + A  +  + V++  +  N+ TYN+ I GL
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGK-VIQRGMSINLFTYNIWIRGL 231

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ GR  E + + D M+      D  TY + I GLCK    + A    R M+  G   D 
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
            TYN +IDG+C+   ++E  EL +    KG + + V+Y  LI GL   G V+ A+ ++  
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
            + K    D   +  L+ GLC  G +  A+Q++NE+ E G                  G 
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 410

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           ++DA  ++N     G   + +T N+L++G+ +  KL++A+ L + M   G +P  ++YN+
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           ++NGLCK  +  E     +EM+ KG  P+ ITY++LI   C+S K++ A K+  +  Q+G
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   +N LI+G C  G +E A  L+  ++++       T+NTL+       +   A 
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +I++ +L +  R D  +Y + + G C  + +  A+  L + + +G +P+  T+  ++ ++
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650

Query: 619 MNN 621
             N
Sbjct: 651 TVN 653



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 250/511 (48%), Gaps = 24/511 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A++  + +    + P++ ++  V++ L K GD+L A  +  ++ +RG+  N+  YNI I 
Sbjct: 170 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229

Query: 179 GFFKKGDYMRAKEIWERLV--METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           G  + G    A     RLV  M     P+VVTYN +I GLCK     E +    RM    
Sbjct: 230 GLCEAGRLPEAV----RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D FTY + I G CK   V+ A  + ++ V  G   D VTY ++I+G C  G ++   
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL+     KG   ++V YN L++GL   G +  A+ +   + E+ C+ D  T+ ++INGL
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 356 CKNGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNA 398
           CK G ++ A  ++N+    G            +G     +L  A  LV RM ++G   + 
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 465

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T NS++NG  +A K+      F+EM  KGC P  ++YN LI   C+  +  EA   + +
Sbjct: 466 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 525

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M ++G  PD ++++ LI G C++  ++ A  L  +  +KG++     +N LI        
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +  A +++  M  +    +  TY  L+DG  KT + D+A      ++++   P + ++  
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            +  L    R+  A   ++  +  G++P  +
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 237/479 (49%), Gaps = 25/479 (5%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y   I    ++G L  A+  F+ M           YN ++D       + +A +++ R+ 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM- 111

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   V P++ T+ + +   C   R    L    R+ +    + +  YC+ + GL   G+ 
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIAL----RLLRALPHRGAVAYCTVVCGLYAHGHT 167

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNIL 316
             A +++ +M+ + +F +   +N ++   C+ G + E    L +V+ R   +N+ +YNI 
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           IRGL E G++ EA+ + + +R      D  T+  LI GLCK     +A+  L        
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR------- 279

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                      RM   GC  + +T N++++G+ + S ++ A  L K+   KG  P  V+Y
Sbjct: 280 -----------RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 328

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            +LINGLC       A     E   KG KPD++ Y+ L+ GLC    I  AL++  +  +
Sbjct: 329 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 388

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  PD+  YNI+I+GLC  G + DA  + ++   +  +P++ T+NTL+DG  K    D 
Sbjct: 389 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 448

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           AL++   + E  + PD I+YN  L GLC   ++++  E   + + +G  P  IT++IL+
Sbjct: 449 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  + E+A + +  + ++GL PD  S+ T+I G  ++GDL GA  +F ++ E+G    
Sbjct: 510 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI  F  K +   A++I++ + +      +  TY V+I+G CK    D      
Sbjct: 570 ADTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 628

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K        T+   I+ L     V  A  +   MV+ G+  + V      D    A
Sbjct: 629 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV------DTILNA 682

Query: 290 GK--IKECFELWEVMGRKGCLNVVSYNILIRGL------LENGK 325
            K  I     L E + +KG ++  +Y +L  G+      LE GK
Sbjct: 683 DKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQSTIYCLEYGK 726



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y   I     AG++ DA+  +  M    C P    YN +MD L      D+A +++  +
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L   + PD+ ++ I L+  C  +R   A   L     RG
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 150


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 259/516 (50%), Gaps = 22/516 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC + + ++A   L+ + + G    PDV SY TVING  K GDL    + ++EM ++ + 
Sbjct: 61  LCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRIS 120

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV YN +I    K     +A E+   +V ++ V P+ +TYN +++G C  G+  E + 
Sbjct: 121 PNVVTYNSIIAALCKAQTVDKAMEVLTTMV-KSGVMPDCMTYNSIVHGFCSSGQPKEAIV 179

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
              +M+ +  E D  TY S +  LCK G    A +++  M + G+  +  TY  ++ G+ 
Sbjct: 180 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYA 239

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G + E   L ++M R G   N   ++IL+    +  KV+EA+ ++  +R++  N ++ 
Sbjct: 240 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+G +I  LCK+G                  R+ DA     +M   G        NSL++
Sbjct: 300 TYGAVIGILCKSG------------------RVEDAMLYFEQMIDEGLSPGNIVYNSLIH 341

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G    +K E A  L  EM  +G     + +N++I+  CK  R  E+      M+  G KP
Sbjct: 342 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 401

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ITYS LI+G C + K+D A KL    +  G  PD   Y+ LI+G C   +++DAL L+
Sbjct: 402 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLF 461

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M+     P+++TYN ++ GLF+T     A E++  I +   + ++ +YNI L GLC  
Sbjct: 462 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKN 521

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               DA     +     +     T++I++ A++  G
Sbjct: 522 KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 557



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 245/470 (52%), Gaps = 21/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVM 212
           A  VFDE+  RG+  +V  YNIL++G   +     A E+   +  +     P+VV+Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ING  K G  D+    ++ M       +  TY S I  LCKA  V+ A  V   MV+SG+
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             D +TYN+++ GFC +G+ KE     + M   G   +VV+YN L+  L +NG+  EA  
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           I++ + ++    + TT+G L+ G     Y  K             G L +   L++ M +
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQG-----YATK-------------GALVEMHGLLDLMVR 256

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G   N Y  + L+  + +  K+E A+ +F +M ++G +P  V+Y  +I  LCK  R  +
Sbjct: 257 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 316

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  + ++M+++G  P  I Y+ LI+GLC   K + A +L  + L +G   +   +N +I 
Sbjct: 317 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 376

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G+V ++ +L+  M +    P+++TY+TL+DG    G  D+A ++   ++   ++P
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           D ++Y+  + G C  SRM DA     +    G+ P  IT++I+++ +   
Sbjct: 437 DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 234/490 (47%), Gaps = 30/490 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S++  +  +  P +A+   ++M    G E  +         LC+  +  +A++  +S+ +
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +GLKP++ +YGT++ G    G L+    + D M   G+  N   ++IL+  + K+     
Sbjct: 222 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 281

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++ ++  +  + PN VTY  +I  LCK GR ++ +  +++M        +  Y S I
Sbjct: 282 AMLVFSKM-RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           HGLC     E AE +  EM++ GI ++ + +N++ID  C+ G++ E  +L+++M R G  
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 400

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++++Y+ LI G    GK+DEA  +   +       D  T+  LING CK          
Sbjct: 401 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS-------- 452

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                     R+ DA  L   M+  G   +  T N ++ G  Q  +   A  L+  +++ 
Sbjct: 453 ----------RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G    + +YN +++GLCK +   +A    + +     K +  T++++I+ L +  + D A
Sbjct: 503 GRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 562

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             L   F   G  P+   Y ++   +   G +E+  QL+ +M+   C  +    N ++  
Sbjct: 563 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 622

Query: 548 LFKTGDCDKA 557
           L + G+  +A
Sbjct: 623 LLQRGEITRA 632



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 38/240 (15%)

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYS 472
           E+A  +F E+ R+G  P V SYN L+NGLC   R  EA   +  M + G    PD+++YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 473 LLING-----------------------------------LCQSKKIDMALKLCCQFLQK 497
            +ING                                   LC+++ +D A+++    ++ 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  PD   YN ++HG CS+G+ ++A+     M+     P++VTYN+LMD L K G C +A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +I++ + +  L+P+I +Y   L+G  +   + +    L+  +  GI P    + ILV A
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF--TPDVTMYNI 508
           +A     E+L +G  PD+ +Y++L+NGLC   +   AL+L       G    PDV  Y+ 
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I+G    G ++     Y+ M  +   PN+VTYN+++  L K    DKA+E+   +++  
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + PD ++YN  + G CS  +  +A  FL      G+ P  +T++ L+  +  NG  T
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 34/252 (13%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L S+   G+KPD  +Y T+ING  K   +  AL +F EM   GV  ++
Sbjct: 414 CLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDI 473

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLV-----METSVYPNVV------------------ 207
           + YNI++ G F+      AKE++  +      +E S Y  ++                  
Sbjct: 474 ITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQN 533

Query: 208 -----------TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                      T+N+MI+ L K GR DE  +++     N    + +TY      +   G 
Sbjct: 534 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 593

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           +E  ++++  M ++G  VD+   N ++    + G+I        ++  K      S   L
Sbjct: 594 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 653

Query: 317 IRGLLENGKVDE 328
              LL  GK  E
Sbjct: 654 FIDLLSGGKYQE 665


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 288/603 (47%), Gaps = 61/603 (10%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLW 127
           ++ I+AY +      A+D F+RM ++F C             L      ++A +    + 
Sbjct: 55  VASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 128 EKGLKPDVYS-------------------------------YGTVINGLVKSGDLLGALA 156
             G+ PD+++                               Y TV+ GL   G    A  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +FD+M    V  N+  +N ++    K+GD + A  +  + V++  +  N+ TYN+ I GL
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGK-VIQRGMSINLFTYNIWIRGL 232

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ GR  E + + D M+      D  TY + I GLCK    + A    R M+  G   D 
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
            TYN +IDG+C+   ++E  EL +    KG + + V+Y  LI GL   G V+ A+ ++  
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
            + K    D   +  L+ GLC  G +  A+Q++NE+ E G                  G 
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 411

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           ++DA  ++N     G   + +T N+L++G+ +  KL++A+ L + M   G +P  ++YN+
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           ++NGLCK  +  E     +EM+ KG  P+ ITY++LI   C+S K++ A K+  +  Q+G
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   +N LI+G C  G +E A  L+  ++++       T+NTL+       +   A 
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +I++ +L +  R D  +Y + + G C  + +  A+  L + + +G +P+  T+  ++ ++
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651

Query: 619 MNN 621
             N
Sbjct: 652 TVN 654



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 250/511 (48%), Gaps = 24/511 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A++  + +    + P++ ++  V++ L K GD+L A  +  ++ +RG+  N+  YNI I 
Sbjct: 171 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230

Query: 179 GFFKKGDYMRAKEIWERLV--METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           G  + G    A     RLV  M     P+VVTYN +I GLCK     E +    RM    
Sbjct: 231 GLCEAGRLPEAV----RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D FTY + I G CK   V+ A  + ++ V  G   D VTY ++I+G C  G ++   
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL+     KG   ++V YN L++GL   G +  A+ +   + E+ C+ D  T+ ++INGL
Sbjct: 347 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406

Query: 356 CKNGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNA 398
           CK G ++ A  ++N+    G            +G     +L  A  LV RM ++G   + 
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 466

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T NS++NG  +A K+      F+EM  KGC P  ++YN LI   C+  +  EA   + +
Sbjct: 467 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 526

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M ++G  PD ++++ LI G C++  ++ A  L  +  +KG++     +N LI        
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +  A +++  M  +    +  TY  L+DG  KT + D+A      ++++   P + ++  
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            +  L    R+  A   ++  +  G++P  +
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 237/479 (49%), Gaps = 25/479 (5%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y   I    ++G L  A+  F+ M           YN ++D       + +A +++ R+ 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM- 112

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   V P++ T+ + +   C   R    L    R+ +    + +  YC+ + GL   G+ 
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIAL----RLLRALPHRGAVAYCTVVCGLYAHGHT 168

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNIL 316
             A +++ +M+ + +F +   +N ++   C+ G + E    L +V+ R   +N+ +YNI 
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           IRGL E G++ EA+ + + +R      D  T+  LI GLCK     +A+  L        
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR------- 280

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                      RM   GC  + +T N++++G+ + S ++ A  L K+   KG  P  V+Y
Sbjct: 281 -----------RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 329

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            +LINGLC       A     E   KG KPD++ Y+ L+ GLC    I  AL++  +  +
Sbjct: 330 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 389

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  PD+  YNI+I+GLC  G + DA  + ++   +  +P++ T+NTL+DG  K    D 
Sbjct: 390 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 449

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           AL++   + E  + PD I+YN  L GLC   ++++  E   + + +G  P  IT++IL+
Sbjct: 450 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  + E+A + +  + ++GL PD  S+ T+I G  ++GDL GA  +F ++ E+G    
Sbjct: 511 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI  F  K +   A++I++ + +      +  TY V+I+G CK    D      
Sbjct: 571 ADTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 629

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K        T+   I+ L     V  A  +   MV+ G+  + V      D    A
Sbjct: 630 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV------DTILNA 683

Query: 290 GK--IKECFELWEVMGRKGCLNVVSYNILIRGL------LENGK 325
            K  I     L E + +KG ++  +Y +L  G+      LE GK
Sbjct: 684 DKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQSTIYCLEYGK 727



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y   I     AG++ DA+  +  M    C P    YN +MD L      D+A +++  +
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L   + PD+ ++ I L+  C  +R   A   L     RG
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 151


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 253/491 (51%), Gaps = 20/491 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           E    PD +SY  VI GL +SG    AL VFDEM + GV  N + YN +IDG  K GD  
Sbjct: 187 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 246

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
               + ++++ +    PN+VTYNV+++GLC+ GR DE   + D M  +    D FTY   
Sbjct: 247 AGFRLRDQMLHDGP-KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 305

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             GL + G       ++ E ++ G+ + A T + +++G C+ GK+ +  ++ E++   G 
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +   V YN LI G  +   +  A  I+E ++ ++   D  T+  LINGLCK       ++
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK-------LE 418

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++ + E+           LV  M+K G   +  T N+L++ +  A +LE    +  +M +
Sbjct: 419 MVTKAED-----------LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG    V+S+ +++   CK  +  EA + + +M+ K   P+   Y+ +I+   +S   + 
Sbjct: 468 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 527

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L  +    G +  +  YN+L+ GLC + ++++A +L   ++ +   P++V+YNT++ 
Sbjct: 528 AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIIS 587

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
                GD DKALE+   + +  +RP + +Y+  +  L S  R+ D        L + + P
Sbjct: 588 ACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEP 647

Query: 607 TTITWHILVRA 617
           ++  + I+V A
Sbjct: 648 SSSIYGIMVDA 658



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 229/469 (48%), Gaps = 21/469 (4%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+L++     G +   +  +  LV      P+   +N ++      G  D  L M  RM 
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLV-AAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMG 184

Query: 234 KNE--REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++E     D+F+Y   I GL ++G    A +V+ EMV+ G+  + +TYN MIDG  + G 
Sbjct: 185 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGD 244

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++  F L + M   G   N+V+YN+L+ GL   G++DE   + + +   +   D  T+ +
Sbjct: 245 LEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSI 304

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L +GL + G     + +  E  + G                 +G++A A  ++  +   G
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                   N+L+NG+ Q   L  A  +F++M  +   P  ++YN LINGLCK+E   +A 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             V EM + G  P + T++ LI+    + +++    +     QKG   DV  +  ++   
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  GK+ +A+ +  +M  ++  PN   YN+++D   ++GD ++A  +   +    +   I
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++YN+ LKGLC  S++ +A E +     +G+ P  ++++ ++ A  N G
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 206/413 (49%), Gaps = 19/413 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++ +  ++ +    + PD ++Y  + +GL ++G+    L++F E  ++GV   
Sbjct: 274 LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 333

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G   +A+++ E LV  T + P  V YN +ING C+         ++
Sbjct: 334 AYTCSILLNGLCKDGKVAKAEQVLEMLV-HTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++MK      D  TY + I+GLCK   V  AE +  EM +SG+     T+N +ID +  A
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M +KG   +V+S+  +++   +NGK+ EA++I + +  K+   ++  +
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +I+   ++G   +A  ++ +++  G                   ++ +A  L+  +  
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  + N++++        + A+ L +EM++ G  PT+ +Y+TL++ L    R  +
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                ++ML K  +P    Y ++++   + +       L  +  +KG   D T
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 2/196 (1%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++ S N L+  L  V R  +  +    ++  G +PD   ++ ++     +  +D+AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 491 CCQF--LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             +    +    PD   YN++I GL  +GK  DAL+++  M     VPN +TYNT++DG 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD +    + + +L +  +P+I++YN+ L GLC   RM +    +++     + P  
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 609 ITWHILVRAVMNNGAS 624
            T+ IL   +   G S
Sbjct: 300 FTYSILFDGLTRTGES 315


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 268/525 (51%), Gaps = 21/525 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A R L SL E+G      +Y TV+ GL   G    A  +FDEM  R V  +V  +N ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              +KGD M +  +  + V++  +  N  T N+ I GLC+ GR +E + + + M      
Sbjct: 124 ALCQKGDIMESGALLAK-VLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA-YIA 181

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  TY + + GLCK   V+ A +  R M+  G   D  TYN +IDG+C+   ++E  EL
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            +    KG + + V+Y  LI GL   G V+ A+ ++   + K+   D   +  L+ GLC+
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
            G +  A+Q++NE+ E G                  G ++DAA ++N     G   + +T
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N++++G+ +  KL++A+ L + M   G +P  ++YN+++NGLCK  +  E     +EM+
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG +P+ ITY++LI   C+  +++ A  +  +  Q G  PD   +N LIHG C  G ++
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A  L+  + ++       T+N L+       +   A +I+  ++ +  +PD+ +Y + +
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITW-HILVRAVMNNGAS 624
            G C  + +  A+  L + + +G +P+  T+  +L    MN+  S
Sbjct: 542 DGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVS 586



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/610 (26%), Positives = 292/610 (47%), Gaps = 42/610 (6%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC---PEDVALSV 79
           A+ D+      +  +  ++  +L   + P    H  RI       K +C      VAL +
Sbjct: 15  AIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRI-------KSFCITGRPHVALRL 67

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           ++     S+P++  DV      +  C    G+      ++ A+   + +  + + PDV +
Sbjct: 68  LR-----SLPERGCDV----KPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVAT 117

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           +  V++ L + GD++ + A+  ++ +RG+  N    NI I G  + G    A  + E   
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVES-- 175

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M+  + P+VVTYN ++ GLCK  +  E  +   RM       D FTY + I G CK   +
Sbjct: 176 MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDML 235

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNIL 316
           + A  + ++ +  G   D VTY ++I+G C  G ++   EL+ E   +    ++V YN L
Sbjct: 236 QEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSL 295

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           ++GL   G +  A+ +   + E  C+ D  T+ ++INGLCK G ++ A  ++N+    G 
Sbjct: 296 VKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY 355

Query: 376 -----------EG-----RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                      +G     +L  A  LV RM  +G   +A T NS++NG  +A K +    
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F+EM  KGC P  ++YN LI   CK+ +  EA   +  M + G  PD I+++ LI+G C
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++  +D A  L  +  +KG++     +NILI    S   ++ A +++  M  +   P+L 
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY  L+DG  K  + D+A      ++ +   P + ++   L  L    R+S+A   ++  
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595

Query: 600 LCRGILPTTI 609
           +  G++P  +
Sbjct: 596 VRMGVVPEVV 605



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 224/452 (49%), Gaps = 21/452 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G       YN ++D       + +A +++ R+ +   V P+  T+ V I   C  GR   
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRM-LSAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L +   + +   +     YC+ + GL   G+   A  ++ EM+   +F D  T+N ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 285 GFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C+ G I E   L  +V+ R   +N  + NI IRGL E G+++EA+++ E + +     
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAP 182

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  L+ GLCK                  + ++ +AA  + RM   GC  + +T N+
Sbjct: 183 DVVTYNTLMRGLCK------------------DSKVQEAAQYLRRMMNQGCIPDDFTYNT 224

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G+ +   L+ A  L K+   KG  P  V+Y +LINGLC       A     E   K 
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            KPD++ Y+ L+ GLC+   I  AL++  + ++ G  PD+  YNI+I+GLC  G + DA 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            + ++   +  +P++ T+NT++DG  K    D AL++   +    + PD I+YN  L GL
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C   +  +  E   + + +G  P  IT++IL+
Sbjct: 405 CKAGKAKEVNETFEEMILKGCRPNAITYNILI 436



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 232/468 (49%), Gaps = 28/468 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A ++L  +  +G  PD ++Y T+I+G  K   L  A  +  +   +G   +
Sbjct: 194 LCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPD 253

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI+G   +GD  RA E++        + P++V YN ++ GLC+ G     L++ 
Sbjct: 254 RVTYCSLINGLCAEGDVERALELFNE-AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVM 312

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M ++    D +TY   I+GLCK GN+  A  V  + +  G   D  T+N MIDG+C+ 
Sbjct: 313 NEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKR 372

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+    +L E M   G   + ++YN ++ GL + GK  E    +E +  K C  ++ T+
Sbjct: 373 LKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 432

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI   CK          +N++EE        A+ ++ RM + G   +  + N+L++GF
Sbjct: 433 NILIENFCK----------INQLEE--------ASGVIVRMSQDGLVPDTISFNTLIHGF 474

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A  LF+++  KG S T  ++N LI           A     EM+ KG+KPD+
Sbjct: 475 CRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDL 534

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY +L++G C++  +D A     + + KGF P +  +  +++ L    +V +A+ +   
Sbjct: 535 YTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHI 594

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           M +   VP +V      D +  T    K +     ++EE ++   ISY
Sbjct: 595 MVRMGVVPEVV------DTILSTD--KKEIAAPKILVEELMKKGHISY 634



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 163/350 (46%), Gaps = 35/350 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHL--FHHILRRLIDPKLVVHVSRILELIE 65
           L+N L AE +   AL LF+ A  +      P L  ++ +++ L    L++H  +++  + 
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKD---LKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 316

Query: 66  IQKCYCPE------------------DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA 107
              C+ P+                  D A+ +  A  K  +PD    VF     I G   
Sbjct: 317 EDGCH-PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD----VFTFNTMIDG--- 368

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
              C++ + + A + +  +W  G+ PD  +Y +V+NGL K+G        F+EM  +G  
Sbjct: 369 --YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N + YNILI+ F K      A  +  R+  +  V P+ +++N +I+G C+ G  D    
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLV-PDTISFNTLIHGFCRNGDLDGAYL 485

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ ++ +      + T+   I       N++ AE+++ EM+  G   D  TY  ++DG C
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSC 545

Query: 288 RAGKIKECF-ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           +A  +   +  L E++ +    ++ ++  ++  L  N +V EA++I  ++
Sbjct: 546 KAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 73/160 (45%)

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P    Y+ +++ L  +   D A K+  + L  G  PD   + + I   C  G+   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L+L  ++ +R C    + Y T++ GL+  G    A  +++ +L   + PD+ ++N  L  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           LC    + ++   L   L RG+     T +I +R +   G
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGG 164


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 270/526 (51%), Gaps = 22/526 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVK---SGDLLGALAVFDEMFERGVETNVVCYN 174
           +A +  N +   G++P + +  T++N LV+   S  +  + AVF +  + GV+ N   +N
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           ILI G   +  +  A  +  ++  +    P+ +TYN +++GLCK GR +E  ++   MK 
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKM-RDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKN 260

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +  T+   + G C+ G ++ A  V   M ++ +  DA TYN MI GFC+ G+I E
Sbjct: 261 KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAE 320

Query: 295 CFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L E M   K   +VV+YN LI G  E+G  +E   + E +  +    +S T+ V++ 
Sbjct: 321 AMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVK 380

Query: 354 GLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKL 396
              K G +++  + + ++EE G                  G++ +A  L++ M + G K+
Sbjct: 381 WFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKM 440

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  T N+++    +  KL+ A  L     R+G     VSY TLI G  K E+  +A    
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
            EM EK   P +ITY+ +I GLCQ  K + A+    + L+ G  PD   YN +IHG C  
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQE 560

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G+VE A Q ++ M ++N  P++VT NTL+ GL K G  +KAL+++N  + +    D +SY
Sbjct: 561 GQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSY 620

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           N  +  LC   R  +AF+ L +   + + P   T++ ++  + + G
Sbjct: 621 NTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAG 666



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 259/494 (52%), Gaps = 20/494 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + +F +A R L  + + G  PD  +Y T+++GL K G L  A  +  +M  +G+  N 
Sbjct: 208 CMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNR 267

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NIL+ G  + G    A  + E L+ + SV P+  TYNVMI+G CK GR  E + + +
Sbjct: 268 TTFNILVVGCCRLGWLKEAANVIE-LMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLRE 326

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+  +   D  TY + I+G  + G+ E   ++  EM   G+  ++VTYN M+  F + G
Sbjct: 327 EMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E  +    M   GCL ++V+YN LI    + GK+DEA  + + +  K    D  T  
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLN 446

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            ++  LC+                  E +L +A  L+    + G  ++  +  +L+ G+ 
Sbjct: 447 TMLRALCR------------------ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYF 488

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K   A+ L+ EM  K   P++++YN++I GLC++ +  +A   + E+LE G  PD I
Sbjct: 489 KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI 548

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ +I+G CQ  +++ A +   + ++K F PDV   N L+ GLC  G +E AL+L++  
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +    + V+YNT++  L K     +A ++   + E++L PD  +YN  L GL    RM
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668

Query: 590 SDAFEFLNDALCRG 603
            DA EF++    +G
Sbjct: 669 KDAEEFISKIAEKG 682



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 242/477 (50%), Gaps = 21/477 (4%)

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF--FKKGDYMRAKEIWERLVME 199
           I   V  G    A  +F+ M   G++  ++  N L++    F     +R  +      ++
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V  N  ++N++I+G C   RF E + +  +M+      D+ TY + + GLCK G +  
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A  +  +M   G+F +  T+N ++ G CR G +KE   + E+M +   + +  +YN++I 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G  + G++ EA+ + E +     + D  T+  LING  ++G            EEG    
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHG----------SSEEG---- 356

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                 L+  M+  G K N+ T N ++  F++  K++      ++M   GC P +V+YNT
Sbjct: 357 ----FKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+  CKV +  EA+  + EM  KG K D +T + ++  LC+ +K+D A  L C   ++G
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           +  D   Y  LI G     K   AL+L+  MK++  +P+++TYN+++ GL + G  ++A+
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + +LE  L PD I+YN  + G C   ++  AF+F N  + +   P  +T + L+
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 179/418 (42%), Gaps = 77/418 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ +  +A R    +    L PDV +Y T+ING  + G       + +EM  RG++ N
Sbjct: 312 FCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPN 371

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+++  F KKG  M   +   R + E+   P++VTYN +I+  CK G+ DE   + 
Sbjct: 372 SVTYNVMVKWFVKKGK-MDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE---------------------------- 261
           D M +   + D  T  + +  LC+   ++ A                             
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 262 -------RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
                  R++ EM E  I    +TYN+MI G C+ GK  +  +  + +   G + + ++Y
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I G  + G+V++A      + EKN   D  T   L+ GLCK G L KA+++ N    
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWIS 610

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 E R  +A  L+  M++     + YT N+++ G   A ++++
Sbjct: 611 KGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKD 670

Query: 417 AIFLFKEMSRKGCS-----------------------PTVVSYNTLINGLCKVERFGE 451
           A     +++ KG S                       P  ++Y+  IN LC   R+ +
Sbjct: 671 AEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 9/226 (3%)

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF------VKE 458
           +  ++   +   A  +F  M R G  PT+++ NTL+N L    RF  ++S         +
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALV---RFPSSHSIRLSKAVFTD 187

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
            ++ G K +  ++++LI+G C   +   A+++  +    G  PD   YN ++ GLC  G+
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + +A  L  +MK +   PN  T+N L+ G  + G   +A  +   + +  + PD  +YN+
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + G C   R+++A     +     + P  +T++ L+     +G+S
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS 353



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 38/149 (25%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK-------------- 550
           + +I I    + G+   A Q+++ MK+    P L+T NTL++ L +              
Sbjct: 126 LLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVF 185

Query: 551 -------------------TGDC-----DKALEIWNHILEERLRPDIISYNITLKGLCSC 586
                               G C      +A+ +   + +    PD I+YN  L GLC  
Sbjct: 186 TDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKK 245

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
            R+++A + L D   +G+ P   T++ILV
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILV 274


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 253/491 (51%), Gaps = 20/491 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           E    PD +SY  VI GL +SG    AL VFDEM + GV  N + YN +IDG  K GD  
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
               + ++++ +    PN+VTYNV+++GLC+ GR DE   + D M  +    D FTY   
Sbjct: 69  AGFRLRDQMLHDGP-KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             GL + G       ++ E ++ G+ + A T + +++G C+ GK+ +  ++ E++   G 
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +   V YN LI G  +   +  A  I+E ++ ++   D  T+  LINGLCK       ++
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK-------LE 240

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++ + E+           LV  M+K G   +  T N+L++ +  A +LE    +  +M +
Sbjct: 241 MVTKAED-----------LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 289

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG    V+S+ +++   CK  +  EA + + +M+ K   P+   Y+ +I+   +S   + 
Sbjct: 290 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 349

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L  +    G +  +  YN+L+ GLC + ++++A +L   ++ +   P++V+YNT++ 
Sbjct: 350 AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIIS 409

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
                GD DKALE+   + +  +RP + +Y+  +  L S  R+ D        L + + P
Sbjct: 410 ACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEP 469

Query: 607 TTITWHILVRA 617
           ++  + I+V A
Sbjct: 470 SSSIYGIMVDA 480



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 221/461 (47%), Gaps = 20/461 (4%)

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E     +   YN++I G ++ G    A ++++ +V +  V PN +TYN MI+G  K G  
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMV-DMGVVPNWITYNTMIDGHVKGGDL 67

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           +    + D+M  +  + +  TY   + GLC+AG ++    +  EM    +F D  TY+ +
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
            DG  R G+ +    L+    +KG  L   + +IL+ GL ++GKV +A  + E+L     
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
              +  +  LING C+   L  A  I  +                  M     + +  T 
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQ------------------MKSRHIRPDHITY 229

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L+NG  +   +  A  L  EM + G  P+V ++NTLI+      +  + ++ + +M +
Sbjct: 230 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 289

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG K D+I++  ++   C++ KI  A+ +    + K   P+  +YN +I     +G  E 
Sbjct: 290 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 349

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A  L   MK      ++VTYN L+ GL ++   D+A E+   +  + LRPD++SYN  + 
Sbjct: 350 AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIIS 409

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             C+      A E L +    GI PT  T+H LV A+ + G
Sbjct: 410 ACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 206/413 (49%), Gaps = 19/413 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++ +  ++ +    + PD ++Y  + +GL ++G+    L++F E  ++GV   
Sbjct: 96  LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 155

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G   +A+++ E LV  T + P  V YN +ING C+         ++
Sbjct: 156 AYTCSILLNGLCKDGKVAKAEQVLEMLV-HTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 214

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++MK      D  TY + I+GLCK   V  AE +  EM +SG+     T+N +ID +  A
Sbjct: 215 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 274

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M +KG   +V+S+  +++   +NGK+ EA++I + +  K+   ++  +
Sbjct: 275 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 334

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +I+   ++G   +A  ++ +++  G                   ++ +A  L+  +  
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  + N++++        + A+ L +EM++ G  PT+ +Y+TL++ L    R  +
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                ++ML K  +P    Y ++++   + +       L  +  +KG   D T
Sbjct: 455 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 24/290 (8%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL---------------SVIQAYG 84
           +F  +  R I P  + + + I  L +++     ED+ +               ++I AYG
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                +K   V   M +         FG      C+  +  +A   L+ +  K + P+  
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            Y ++I+  ++SGD   A  + ++M   GV  ++V YN+L+ G  +      A+E+   L
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                + P+VV+YN +I+  C  G  D+ LE+   M K        TY + +  L  AG 
Sbjct: 393 -RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 451

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           V   E +Y++M+   +   +  Y  M+D + R     +   L + M  KG
Sbjct: 452 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD   YN++I GL  +GK  DAL+++  M     VPN +TYNT++DG  K GD +    +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + +L +  +P+I++YN+ L GLC   RM +    +++     + P   T+ IL   +  
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 621 NGAS 624
            G S
Sbjct: 134 TGES 137


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 263/527 (49%), Gaps = 26/527 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR ++  +AK     + + GLKPD  +   +I+G ++ GD+   L + D M   G+  N
Sbjct: 20  LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN+LI G  K G   +A EI + ++      PN  T+ ++I G C+       LE+ 
Sbjct: 80  LITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+K      + +Y + I+GLC   ++  A ++  +M  SG+  + V Y+ +I G+   
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I+E   L + M   G   ++  YN +I  L + GK++EA +    ++ +    D+ T 
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I G  K G + +A +  +E+ + G                  G L +A S+   +  
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  TC++ ++G ++  +++ A+ +F E+  KG  P V +Y++LI+G CK     +
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+    EM  KG  P++  Y+ L++GLC+S  I  A KL     +KG  PD   Y+ +I 
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C +  V +A  L+  M  +   P+   YN L+ G  K GD +KA+ ++  +L++    
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-A 497

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP------TTITWH 612
             +S+N  + G C   ++ +A +   + + + I+P      T I WH
Sbjct: 498 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 544



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 250/498 (50%), Gaps = 20/498 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + EKGL P+ Y+Y  +  GL ++  +  A   F+EM + G++ +    + LIDGF ++GD
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
                 I + +V    +  N++TYNV+I+GLCK G+ ++  E+   M     + +S T+C
Sbjct: 61  IDEVLRIKDVMV-SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I G C+  N+  A  +  EM +  +   AV+Y AMI+G C    +    +L E M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   NVV Y+ LI G    G+++EA  + + +       D   +  +I+ L K G + +A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
              L E++    GR              G K +A T  + + G+ +  K+  A   F EM
Sbjct: 240 STYLLEIQ----GR--------------GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P    Y  LING  K     EA S  + +   G  PD+ T S  I+GL ++ ++
Sbjct: 282 LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRV 341

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             ALK+  +  +KG  PDV  Y+ LI G C  G+VE A +L+  M  +   PN+  YN L
Sbjct: 342 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 401

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K+GD  +A ++++ + E+ L PD ++Y+  + G C    +++AF   ++   +G+
Sbjct: 402 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461

Query: 605 LPTTITWHILVRAVMNNG 622
            P +  ++ LV      G
Sbjct: 462 QPHSFVYNALVHGCCKEG 479



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 263/528 (49%), Gaps = 38/528 (7%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+A+R L+ +   G+ PD++ Y  +I+ L K+G +  A     E+  RG++ + V + 
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
             I G+ K G    A + ++ + ++  + PN   Y V+ING  K G   E L ++  +  
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D  T  +FIHGL K G V+ A +V+ E+ E G+  D  TY+++I GFC+ G++++
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 295 CFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            FEL + M  KG   N+  YN L+ GL ++G +  A  +++ + EK    DS T+  +I+
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G CK+                    +A+A SL + M   G + +++  N+L++G  +   
Sbjct: 439 GYCKSE------------------NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E A+ LF+EM +KG + T +S+NTLI+G CK  +  EA    +EM+ K   PD +TY+ 
Sbjct: 481 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 474 LINGLCQSKK-----------------IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +I+  C++ K                 +D    L  + + KG  PD   Y ++I+  C  
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
             + +A +L   +  +  +     ++ L+  L K  D  +A ++ + + E  L+P + + 
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +  ++      +M +A          G++P T T   LV   +N+  S
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 707



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 272/547 (49%), Gaps = 37/547 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+    +A   L+ + ++ L P   SYG +INGL    DL  A  + ++M   G++ NV
Sbjct: 126 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 185

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y+ LI G+  +G    A+ + + +   + V P++  YN +I+ L K G+ +E      
Sbjct: 186 VVYSTLIMGYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            ++    + D+ T+ +FI G  K G +  A + + EM++ G+  +   Y  +I+G  +AG
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   ++  +   G L +V + +  I GLL+NG+V EA+ ++  L+EK    D  T+ 
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            LI+G CK G + KA ++ +E+   G                  G +  A  L + M + 
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + ++ T +++++G+ ++  +  A  LF EM  KG  P    YN L++G CK     +A
Sbjct: 425 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 484

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +  +EML+KG+    ++++ LI+G C+S KI  A +L  + + K   PD   Y  +I  
Sbjct: 485 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 543

Query: 513 LCSAGKVEDALQLYSNMKKRNCV-----------------PNLVTYNTLMDGLFKTGDCD 555
            C AGK+E+A  L+  M++RN +                 P+ VTY  ++    K  +  
Sbjct: 544 HCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 603

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A ++ + ++ + +      +++ +  LC    +++A + L++    G+ P+      LV
Sbjct: 604 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 663

Query: 616 RAVMNNG 622
           R+    G
Sbjct: 664 RSFHEAG 670



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 219/445 (49%), Gaps = 40/445 (8%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R L++L   G+ PDV +    I+GL+K+G +  AL VF E+ E+G+  +V  Y+ LI GF
Sbjct: 314 RHLHAL---GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 370

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K+G+  +A E+ + + ++  + PN+  YN +++GLCK G      +++D M +   E D
Sbjct: 371 CKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           S TY + I G CK+ NV  A  ++ EM   G+   +  YNA++ G C+ G +++   L+ 
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
            M +KG    +S+N LI G  ++ K+ EA  +++ +  K    D  T+  +I+  CK G 
Sbjct: 490 EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           + +A  +  E++E          +L+                           ++    L
Sbjct: 550 MEEANLLFKEMQE---------RNLI---------------------------VDTVFAL 573

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F++M  KG  P  V+Y  +I   CK +   EA+    E++ KG       + LLI  LC+
Sbjct: 574 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 633

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            + +  A KL  +  + G  P +   + L+     AGK+++A +++  +K    VP+  T
Sbjct: 634 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 693

Query: 541 YNTLMDGLFKTGDCDKALEIWNHIL 565
              L++G     D + A  +   ++
Sbjct: 694 LIDLVNGNLNDTDSEDARNLIKQLV 718



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 215/413 (52%), Gaps = 45/413 (10%)

Query: 91  KALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           +AL +F+ ++      ++  C A I  L +  + ++A +  + L EKGL PDV++Y ++I
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G  K G++  A  + DEM  +G+  N+  YN L+DG  K GD  RA+++++ +  E  +
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGL 426

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ VTY+ MI+G CK     E   ++  M     +  SF Y + +HG CK G++E A  
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           ++REM++ G F   +++N +IDG+C++ KI+E  +L++ M  K  + + V+Y  +I    
Sbjct: 487 LFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545

Query: 322 ENGKVDEAISIWELLREKN-----------------CNADSTTHGVLINGLCKNGYLNKA 364
           + GK++EA  +++ ++E+N                    D  T+G++I   CK   L +A
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            ++ +EV   G                    L +A+ L++ M + G K +   C++L+  
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 665

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           F +A K++ A  +F+ +   G  P   +   L+NG        +A + +K+++
Sbjct: 666 FHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 18/288 (6%)

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           EK    ++ T+ ++  GLC+   +N+A     E                  M K G K +
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEE------------------MQKTGLKPD 44

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
              C++L++GF++   ++  + +   M   G    +++YN LI+GLCK  +  +A   +K
Sbjct: 45  YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 104

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+  G KP+  T+ LLI G C+   +  AL+L  +  ++   P    Y  +I+GLC   
Sbjct: 105 GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 164

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            +  A +L   M      PN+V Y+TL+ G    G  ++A  + + +    + PDI  YN
Sbjct: 165 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYN 224

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             +  L    +M +A  +L +   RG+ P  +T+   +      G  T
Sbjct: 225 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/659 (25%), Positives = 314/659 (47%), Gaps = 69/659 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L   ++    L LF    +E GYA + HLF  ++R       V     +L+  E++
Sbjct: 206 LIGALSTSRDSDCMLTLFQQ-MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD--EMK 262

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKR--- 114
                 DV L    I  +GK    D A   F  M           +    G+LC+     
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322

Query: 115 --------------------------------QFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
                                           +FE A   L     KG  P V SY  ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           + L + G +  AL  F+EM +  +  N+  YNI+ID   K G    A  + + +  +  +
Sbjct: 383 SCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGL 440

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PNV+T N+M++ LCK  R D+   +++ +       D+ TYCS I GL + G V+ A +
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +Y +M+++    +AV Y ++I  F + G+ ++  +++  M R GC  +++  N  +  + 
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G++++  ++++ ++      D+ ++ +LI+GL K G+ ++A ++   ++E        
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE-------- 612

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC L+    N++++GF ++ K+  A  L +EM  KG  PTVV+Y ++I+
Sbjct: 613 ----------QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL K++R  EAY   +E   KG + +++ YS LI+G  +  +ID A  +  + +QKG TP
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V  +N L+  L  A ++ +AL  + +MK   C PN +TY+ L+ GL K    +KA   W
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             + ++  +P++ +Y   + GL     + +A         +G +  +  ++ ++  + N
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 293/626 (46%), Gaps = 47/626 (7%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L+  K+ + A+  F  A R    AH    ++ +L  +   +    + +ILE + I 
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIA 159

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
                 +  + ++ ++ K+                           R+  +A  F+ ++ 
Sbjct: 160 GFGPSNNTCIEIVLSFIKS---------------------------RKLREAFTFIQTMR 192

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +   +P   +Y  +I  L  S D    L +F +M E G   NV  +  LI  F ++G   
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  + + +    S+ P+VV YNV I+   K G+ D   + +  MK N    D  TY S 
Sbjct: 253 AALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I  LCKA  +  A  ++  M ++     A  YN MI G+  AGK ++ + L E   RKGC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + +VVSYN ++  L   G+VDEA+  +E ++ K+   + +T+ ++I+ LCK G L  A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALV 430

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + + +++ G                   RL DA S+   +D   C+ +A T  SL+ G  
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +++ A  L+++M      P  V Y +LI    K  R  + +    EML  G  PD++
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             +  ++ + ++ +I+    L  +    GF PD   Y ILIHGL  AG   +A +L+  M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K++ CV +   YNT++DG  K+G  +KA ++   +  +   P +++Y   + GL    R+
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +A+    +A  +GI    + +  L+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLI 696



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 212/485 (43%), Gaps = 22/485 (4%)

Query: 157 VFDEMFERGV-ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           + +EM   G   +N  C  I++   F K   +R    + + + +    P    Y  +I  
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLS--FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           L      D  L ++ +M++     +   + + I    + G V+ A  +  EM  + +  D
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWE 334
            V YN  ID F +AGK+   ++ +  M   G  L+ V+Y  +I  L +  +++EA+ ++E
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFE 329

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            + +      +  +  +I G    G    A  +L      G                 +G
Sbjct: 330 HMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG 389

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ +A      M K     N  T N +++   +A KLE A+ +   M   G  P V++ N
Sbjct: 390 QVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN 448

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +++ LCK +R  +A S  + +  K  +PD +TY  LI GL +  ++D A KL  Q L  
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA 508

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              P+  +Y  LI      G+ ED  ++Y+ M +  C P+L+  NT MD +FK G+ +K 
Sbjct: 509 NQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             ++  I      PD  SY I + GL       +A+E       +G +  T  ++ ++  
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628

Query: 618 VMNNG 622
              +G
Sbjct: 629 FCKSG 633


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 171/642 (26%), Positives = 304/642 (47%), Gaps = 35/642 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L   + P  AL L     +E GY    HLF  ++R L        V+  L L++  
Sbjct: 51  LIGALAEARRPERALELLRQ-MQEVGYEVGVHLFTTLVRALAREG---QVADALALVDEV 106

Query: 68  KCYC--PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQF 116
           K  C  P+ V  +V I  +GK    D A   F  +           +     +LC+  + 
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL 166

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +A+     +  +   P  Y+Y T+I G   +G    A  + + + ERG   +VV +N +
Sbjct: 167 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 226

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +    KK     A  ++E  VM+    PN  TYN++I+ LC  GR +E   + D M+   
Sbjct: 227 LTCLGKKRKVDEALSLFE--VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 284

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              +  T    +  LCKA  +E A +++    + G   D VTY ++IDG  + G++ E +
Sbjct: 285 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAY 344

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L+E M   G   N V Y  LIR    +G+ ++   +++ L  + C  D T     ++ +
Sbjct: 345 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCV 404

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
            K G + K   I  ++   G                  G+  + +++ + M + G  L+A
Sbjct: 405 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 464

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N++++GF ++ K+  A  + +EM  K   PTV +Y  +++GL K++R  EAY   +E
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
              KG + +++ YS LI+G  +  +ID A  +  + ++KG TP+V  +N L+  L  A +
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + +AL  + +MK+  C PN  TY+ L++GL +    +KA   W  + ++ L P++++Y  
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + GL     ++DA+         G +P   +++ L+  + N
Sbjct: 645 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 209/464 (45%), Gaps = 52/464 (11%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    Y V+I  L +  R +  LE+  +M++   E     + + +  L + G V  A  +
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102

Query: 264 YREMVESGIFVDAVTYNAMIDGF-----------------------------------CR 288
             E+  S +  D V YN  ID F                                   C+
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCK 162

Query: 289 AGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AG++ E  EL+  M   +      +YN +I G    G+ ++A  + E LRE+ C     +
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 222

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE----------------GRLADAASLVNRMDK 391
              ++  L K   +++A+ +   +++  E                GR+ +A  +++ M+ 
Sbjct: 223 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH 282

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T N +++   +A KLE A  +F+  S++GC+P  V+Y +LI+GL K  +  E
Sbjct: 283 ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 342

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           AY   ++ML+ G   + + Y+ LI       + +   K+  + +++G  PD+T+ N  + 
Sbjct: 343 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMD 402

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            +  AG+VE    ++ +++    +P++ +Y+ L+ GL K G   +   I++ + ++    
Sbjct: 403 CVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL 462

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           D  +YN  + G C   ++  A+E L +   + + PT  T+  +V
Sbjct: 463 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L   L+   ++D+A+    ++R        + + VLI  L +     +A+++L +++E G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EG++ADA +LV+ +     + +    N  ++ F +A  ++ A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             F E+  +G  P  VSY ++I  LCK  R GEA     +M  +   P    Y+ +I G 
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
             + + + A KL  +  ++G  P V  +N ++  L    KV++AL L+  MKK +  PN 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 254

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            TYN ++D L   G  ++A  I + +    L P++++ NI +  LC   ++ +A++    
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
           A  RG  P  +T+  L+  +   G
Sbjct: 315 ASQRGCNPDCVTYCSLIDGLGKKG 338



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 106/223 (47%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  L    C  L    ++A +L++A+     M R    P   +Y  LI  L +  R   A
Sbjct: 5   GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              +++M E G++  +  ++ L+  L +  ++  AL L  +       PD+ +YN+ I  
Sbjct: 65  LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDC 124

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
              AG V+ A + +  +K +   P+ V+Y +++  L K G   +A E++  +  ER  P 
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             +YN  + G  S  R  DA++ L     RG +P+ ++++ ++
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 227


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/642 (26%), Positives = 304/642 (47%), Gaps = 35/642 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L   + P  AL L     +E GY    HLF  ++R L        V+  L L++  
Sbjct: 185 LIGALAEARRPERALELLRQ-MQEVGYEVGVHLFTTLVRALAREG---QVADALALVDEV 240

Query: 68  KCYC--PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQF 116
           K  C  P+ V  +V I  +GK    D A   F  +           +     +LC+  + 
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL 300

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +A+     +  +   P  Y+Y T+I G   +G    A  + + + ERG   +VV +N +
Sbjct: 301 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 360

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +    KK     A  ++E  VM+    PN  TYN++I+ LC  GR +E   + D M+   
Sbjct: 361 LTCLGKKRKVDEALSLFE--VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 418

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              +  T    +  LCKA  +E A +++    + G   D VTY ++IDG  + G++ E +
Sbjct: 419 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAY 478

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L+E M   G   N V Y  LIR    +G+ ++   I++ L  + C  D T     ++ +
Sbjct: 479 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 538

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
            K G + K   I  ++   G                  G+  + +++ + M + G  L+A
Sbjct: 539 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 598

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N++++GF ++ K+  A  + +EM  K   PTV +Y  +++GL K++R  EAY   +E
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
              KG + +++ YS LI+G  +  +ID A  +  + ++KG TP+V  +N L+  L  A +
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + +AL  + +MK+  C PN  TY+ L++GL +    +KA   W  + ++ L P++++Y  
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + GL     ++DA+         G +P   +++ L+  + N
Sbjct: 779 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 820



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 240/460 (52%), Gaps = 23/460 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+ E+A +   S  ++G  PD  +Y ++I+GL K G +  A  +F++M + G   N
Sbjct: 433 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 492

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI  FF  G      +I++ L+      P++   N  ++ + K G  ++   ++
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELI-RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + ++      D  +Y   IHGL KAG       ++  M + G  +DA  YNA++DGFC++
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611

Query: 290 GKIKECFELWEVMGRKGCLN--VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           GK+ + +E+ E M  K C+   V +Y  ++ GL +  ++DEA  ++E  + K    +   
Sbjct: 612 GKVHKAYEILEEMKEK-CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 670

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G  K G +++A  IL E                  M K G   N YT NSL++ 
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEE------------------MMKKGLTPNVYTWNSLLDA 712

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            ++A ++  A+  F+ M    C P   +Y+ LINGLC+V+++ +A+ F ++M ++G  P+
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+ +I+GL +   I  A  L  +F   G  PD   +N LI G+ +A +  +A Q++ 
Sbjct: 773 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFE 832

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
             + R C  N+ +  +L+D L K+ +C +   I   +L E
Sbjct: 833 ETRLRGCRINIKSCISLLDALNKS-ECLEQAAIVGAVLRE 871



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 211/499 (42%), Gaps = 87/499 (17%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    Y V+I  L +  R +  LE+  +M++   E     + + +  L + G V  A  +
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 264 YREMVESGIFVDAVTYNAMIDGF-----------------------------------CR 288
             E+  S +  D V YN  ID F                                   C+
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296

Query: 289 AGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AG++ E  EL+  M   +      +YN +I G    G+ ++A  + E LRE+ C     +
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE----------------GRLADAASLVNRMDK 391
              ++  L K   +++A+ +   +++  E                GR+ +A  +++ M+ 
Sbjct: 357 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH 416

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T N +++   +A KLE A  +F+  S++GC+P  V+Y +LI+GL K  +  E
Sbjct: 417 ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 476

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-------------- 497
           AY   ++ML+ G   + + Y+ LI       + +   K+  + +++              
Sbjct: 477 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMD 536

Query: 498 ---------------------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
                                GF PDV  Y+ILIHGL  AG+  +   ++  MK++    
Sbjct: 537 CVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL 596

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +   YN ++DG  K+G   KA EI   + E+ ++P + +Y   + GL    R+ +A+   
Sbjct: 597 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF 656

Query: 597 NDALCRGILPTTITWHILV 615
            +A  +GI    + +  L+
Sbjct: 657 EEAKSKGIELNVVLYSSLI 675



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L   L+   ++D+A+    ++R        + + VLI  L +     +A+++L +++E G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EG++ADA +LV+ +     + +    N  ++ F +A  ++ A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             F E+  +G  P  VSY ++I  LCK  R GEA     +M  +   P    Y+ +I G 
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
             + + + A KL  +  ++G  P V  +N ++  L    KV++AL L+  MKK +  PN 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 388

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            TYN ++D L   G  ++A  I + +    L P++++ NI +  LC   ++ +A++    
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
           A  RG  P  +T+  L+  +   G
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKG 472



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 109/234 (46%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           LA    ++  M   G  L    C  L    ++A +L++A+     M R    P   +Y  
Sbjct: 125 LAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTV 184

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI  L +  R   A   +++M E G++  +  ++ L+  L +  ++  AL L  +     
Sbjct: 185 LIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC 244

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+ +YN+ I     AG V+ A + +  +K +   P+ V+Y +++  L K G   +A 
Sbjct: 245 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 304

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           E++  +  ER  P   +YN  + G  S  R  DA++ L     RG +P+ ++++
Sbjct: 305 ELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFN 358


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/659 (25%), Positives = 314/659 (47%), Gaps = 69/659 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L   ++    L LF    +E GYA + HLF  ++R       V     +L+  E++
Sbjct: 206 LIGALSTSRDSDCMLTLFQQ-MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD--EMK 262

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKR--- 114
                 DV L    I  +GK    D A   F  M           +    G+LC+     
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322

Query: 115 --------------------------------QFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
                                           +FE A   L     KG  P V SY  ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           + L + G +  AL  F+EM +  +  N+  YNI+ID   K G    A  + + +  +  +
Sbjct: 383 SCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGL 440

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PNV+T N+M++ LCK  R D+   +++ +       D+ TYCS I GL + G V+ A +
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +Y +M+++    +AV Y ++I  F + G+ ++  +++  M R GC  +++  N  +  + 
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G++++  ++++ ++      D+ ++ +LI+GL K G+ ++A ++   ++E        
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE-------- 612

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC L+    N++++GF ++ K+  A  L +EM  KG  PTVV+Y ++I+
Sbjct: 613 ----------QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL K++R  EAY   +E   KG + +++ YS LI+G  +  +ID A  +  + +QKG TP
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V  +N L+  L  A ++ +AL  + +MK   C PN +TY+ L+ GL K    +KA   W
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             + ++  +P++ +Y   + GL     + +A         +G +  +  ++ ++  + N
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 293/626 (46%), Gaps = 47/626 (7%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L+  K+ + A+  F  A R    AH    ++ +L  +   +    + +ILE + I 
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIA 159

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
                 +  + ++ ++ K+                           R+  +A  F+ ++ 
Sbjct: 160 GFGPSNNTCIEIVLSFIKS---------------------------RKLREAFTFIQTMR 192

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +   +P   +Y  +I  L  S D    L +F +M E G   NV  +  LI  F ++G   
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  + + +    S+ P+VV YNV I+   K G+ D   + +  MK N    D  TY S 
Sbjct: 253 AALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I  LCKA  +  A  ++  M ++     A  YN MI G+  AGK ++ + L E   RKGC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + +VVSYN ++  L   G+VDEA+  +E ++ K+   + +T+ ++I+ LCK G L  A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALV 430

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + + +++ G                   RL DA S+   +D   C+ +A T  SL+ G  
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +++ A  L+++M      P  V Y +LI    K  R  + +    EML  G  PD++
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             +  ++ + ++ +I+    L  +    GF PD   Y ILIHGL  AG   +A +L+  M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K++ CV +   YNT++DG  K+G  +KA ++   +  +   P +++Y   + GL    R+
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +A+    +A  +GI    + +  L+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLI 696



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 212/485 (43%), Gaps = 22/485 (4%)

Query: 157 VFDEMFERGV-ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           + +EM   G   +N  C  I++   F K   +R    + + + +    P    Y  +I  
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLS--FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           L      D  L ++ +M++     +   + + I    + G V+ A  +  EM  + +  D
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWE 334
            V YN  ID F +AGK+   ++ +  M   G  L+ V+Y  +I  L +  +++EA+ ++E
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFE 329

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            + +      +  +  +I G    G    A  +L      G                 +G
Sbjct: 330 HMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG 389

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ +A      M K     N  T N +++   +A KLE A+ +   M   G  P V++ N
Sbjct: 390 QVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN 448

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +++ LCK +R  +A S  + +  K  +PD +TY  LI GL +  ++D A KL  Q L  
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA 508

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              P+  +Y  LI      G+ ED  ++Y+ M +  C P+L+  NT MD +FK G+ +K 
Sbjct: 509 NQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             ++  I      PD  SY I + GL       +A+E       +G +  T  ++ ++  
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628

Query: 618 VMNNG 622
              +G
Sbjct: 629 FCKSG 633


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 236/466 (50%), Gaps = 25/466 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N++I G  + G    A  ++ +  M  +  P+ +TY  +++GL K  R  + +++   M
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQ--MNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  D+ T    +  LC    V+ A  +  EM+  G+  +A+TY+A++DG C+  ++
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E   L E M  +GC   VV+YN +I G     +VDEA    E +  + C+ D  T+  L
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           I G CK+  + + +++L EV   G                  GRL DA  +   M    C
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SC 242

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
              A T NSL+ G+ +A  ++ AI L  +M    C+P VV+Y TL++  CK+ R  +AY 
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             ++M+     PD++T++ L++GLC   +++ AL+L  +  ++G  P +  YN ++ G C
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE--RLRPD 572
            A +V  A +L ++ + R  VPN VTYN L+ G  + G  D+AL+  + +  E       
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +  Y I L  LC   R  DA +F  + + RG +P   T+  +V A+
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 254/512 (49%), Gaps = 27/512 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGV 166
           G LCR  +   A      + +    PD  +Y  +++GL K+  L  A+ V  EM   R V
Sbjct: 13  GGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHV 71

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N     +++           A+E+ E + +   +  N +TY+ +++GLCKC R DE +
Sbjct: 72  PDNTT-LTVVVQSLCLGDRVDDARELVEEM-LHRGMAANAITYSALVDGLCKCERLDEAV 129

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + + M +        TY S I G C+A  V+ A     +MV  G   D +TY A+I GF
Sbjct: 130 ALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGF 189

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C++  +    EL   + R+G   ++V+Y+ +I GL + G++ +A+ I+E   E +C   +
Sbjct: 190 CKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTA 246

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+  LI G C+ G +++AI++L ++ +                    GRL DA  L  +
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M  +    +  T  SL++G     ++E+A+ L +E++R+GC PT+ +YN +++G CK  +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMY 506
             +A   V +   +G+ P+ +TY++L+ G C++ + D AL+   Q   +G      V MY
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            I++  LC  G+ +DA+Q Y  M +R  VP   T+ T++  L K     +A E+   +++
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
               P   + +  +   C    +  A E  ++
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 189/344 (54%), Gaps = 21/344 (6%)

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           +N +I G CRAG+++    ++  M      + ++Y  L+ GL +  ++ +A+ + + +  
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                D+TT  V++  LC                     R+ DA  LV  M   G   NA
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGD------------------RVDDARELVEEMLHRGMAANA 109

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T ++L++G  +  +L+ A+ L + M+ +GC+PTVV+YN++I G C+  R  EA+ F+++
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+ +G  PD+ITY+ LI G C+S+ +   L+L  +  ++GFTPD+  Y+ +I GLC AG+
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + DA+ ++  M   +C P  +TYN+L+ G  + GD D+A+ +   +++++  PD+++Y  
Sbjct: 230 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTT 286

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   C   R+ DA+E     +   + P  +T+  LV  +   G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 330



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 214/441 (48%), Gaps = 24/441 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A+  +  +  +G+  +  +Y  +++GL K   L  A+A+ + M ERG    
Sbjct: 84  LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPT 143

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I GF +      A    E++V E   +P+++TY  +I G CK       LE+ 
Sbjct: 144 VVTYNSIITGFCRARRVDEAHGFMEQMVAE-GCHPDIITYTALIGGFCKSRDVGRGLELL 202

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             + +     D  TY + I GLCKAG +  A  ++ EM        A+TYN++I G+CRA
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRA 259

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L   M    C  +VV+Y  L+    + G++D+A  +++ +     + D  T 
Sbjct: 260 GDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++GLC  G +  A+++L E+   G                   ++  A  LV     
Sbjct: 320 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERF 449
            G   N  T N L+ G  +A + + A+    +++ +G  C  +V  Y  +++ LC+  R 
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A  F +EM+++G+ P   T++ ++  LC++ +   A +L  + ++ G TP     + +
Sbjct: 440 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 499

Query: 510 IHGLCSAGKVEDALQLYSNMK 530
           +   C AG ++ A +L S ++
Sbjct: 500 VSAYCRAGMIQKADELASELR 520



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 171/355 (48%), Gaps = 25/355 (7%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C+ R   +    L  +  +G  PD+ +Y TVI+GL K+G L  A+ +F+EM      
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 243

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
              + YN LI G+ + GD   A  +  ++V +    P+VVTY  +++  CK GR D+  E
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMV-DDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ +M  N+   D  T+ S + GLC  G +E A  +  E+   G      TYN ++DG+C
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNAD 344
           +A ++++  EL      +G + N V+YNIL+ G    G+ D+A+   + L  +   C   
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
              + ++++ LC++G  + A+Q   E                  M + G    A T  ++
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEE------------------MIQRGYVPAAATFATV 464

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           +    +A + + A  L +EM + G +P   + + +++  C+     +A     E+
Sbjct: 465 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 12/326 (3%)

Query: 57  VSRILELIE--IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN-----EIFGCEAG 108
           V R LEL+    ++ + P+ V  S VI    K      A+D+F+ M+       +    G
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIG 254

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
             CR    ++A R L  + +    PDV +Y T+++   K G L  A  +F +M    +  
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV +  L+DG   +G    A E+ E  +      P + TYN +++G CK  +  +  E+
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEE-ITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG--IFVDAVTYNAMIDGF 286
               +      ++ TY   + G C+AG  + A +   ++   G         Y  ++D  
Sbjct: 374 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 287 CRAGKIKECFELWEVMGRKGCLN-VVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G+  +  + +E M ++G +    ++  ++  L +  +  +A  + E + +       
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEV 371
            T   +++  C+ G + KA ++ +E+
Sbjct: 494 GTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P   ++N++I GLC AG++  AL +Y  M   +  P+ +TY  L+ GL K      A+++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              ++  R  PD  +  + ++ LC   R+ DA E + + L RG+    IT+  LV
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALV 116


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 265/531 (49%), Gaps = 19/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    + AK F   + + GL PDVYSY  +++GL  +G +  AL   ++M   GVE +
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YNIL +GF   G    A ++ +R+++   + P++VTY ++I G C+ G  +E  ++ 
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLL-NGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M     +    TY   +  LCK+G ++ A  +  EM   G+  D +TY+ +I G C+ 
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E  EL+E M  K    N    + +I GL E G + EA   ++ + + +   +   +
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            ++I+G  K G + +A++   ++ E G                 +G+LA+A  L++ +  
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG    + T  +LMNG+ +   + +   +  EM  K   PT ++Y  ++ GLCK  R  E
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +   +K M  +G  PD ITY+ +I   C++  +  A +L  Q LQ    P    YN+LI+
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC  G ++DA +L   ++ ++     V Y T++      GD   AL  ++ ++E     
Sbjct: 699 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 758

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I  Y+  +  LC  + ++DA  F    L  GI P      +++ A   +G
Sbjct: 759 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSG 809



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 274/559 (49%), Gaps = 24/559 (4%)

Query: 82  AYGKNSMPDKALDVFQRMNEI-----FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           AY +  M   AL V  +M  +           +L   R  +      N +   G+  + Y
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEY 236

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +   +I+GL +   L  A+    E        +VV +N L+ GF K G    AK  +  +
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF-CM 295

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +++  + P+V +YN++++GLC  G  +E LE  + M+ +  E D  TY    +G    G 
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           + GA +V + M+ +G+  D VTY  +I G C+ G I+E F+L E M  +G  L++V+Y +
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE----- 370
           L+  L ++G++DEA+ +   +       D  T+ VLI+GLCK G + +AI++  E     
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 371 ----------VEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                     +  G   +G +++A    + + K          N +++G+ +   +  A+
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             +K++  KG SPT+V++N+LI G CK  +  EA   +  +   G  P  +TY+ L+NG 
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+   +     +  +   K   P    Y +++ GLC  G++ +++QL   M  R   P+ 
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           +TYNT++    K  D  KA ++ N +L+  L+P  ++YN+ + GLC    + DA   L  
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 599 ALCRGILPTTITWHILVRA 617
              + I  T + +  +++A
Sbjct: 716 LQDQSIRLTKVAYTTIIKA 734



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 236/515 (45%), Gaps = 54/515 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     E+A  F N +   G++PD+ +Y  + NG    G + GA  V   M   G+  +
Sbjct: 315 LCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPD 374

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y ILI G  + G+   + ++ E++ +   +  ++VTY V+++ LCK GR DE + + 
Sbjct: 375 LVTYTILICGHCQMGNIEESFKLKEKM-LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL 433

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM---------------------- 267
             M+    + D  TY   IHGLCK G VE A  +Y EM                      
Sbjct: 434 HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEK 493

Query: 268 ---VESGIFVDAVT----------YNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
               E+ ++ D+VT          YN MIDG+ + G I E    ++ +  KG    +V++
Sbjct: 494 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 553

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + GK+ EA+ + + ++       S T+  L+NG C+ G ++    +L+E+E 
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 613

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                              EGRL ++  L+  M   G   +  T N+++  F +A  L+ 
Sbjct: 614 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQK 673

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L  +M +    P+ V+YN LINGLC      +A   +  + ++  +   + Y+ +I 
Sbjct: 674 AFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIK 733

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C    +  AL    Q +++GF   +  Y+ +I+ LC    + DA   +  M      P
Sbjct: 734 AHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 793

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           +      +++   ++GD +   EI+  +++  L P
Sbjct: 794 DQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 209/419 (49%), Gaps = 22/419 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++ TYN ++  L      D   ++++ +K +   ++ +T    I GLC+   ++ A    
Sbjct: 202 SIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFL 258

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
           RE          V++NA++ GFC+ G +      + +M + G L +V SYNIL+ GL   
Sbjct: 259 RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVA 318

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G ++EA+     +       D  T+ +L NG           +IL        G ++ A 
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGF----------RIL--------GLISGAW 360

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +V RM  +G   +  T   L+ G  Q   +E +  L ++M  +G   ++V+Y  L++ L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK  R  EA   + EM   G KPD++TYS+LI+GLC+   ++ A++L  +   K   P+ 
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            + + +I GL   G + +A   + ++ K +    ++ YN ++DG  K G+  +A+  +  
Sbjct: 481 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I+E+ + P I+++N  + G C   ++++A + L+     G++PT++T+  L+      G
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 21/316 (6%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           +++ +YN L+  L      D    ++  ++      +  T+ +LI+GLC+   L  A+  
Sbjct: 201 VSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF 257

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L E   GGE       S                 N+LM+GF +   ++ A   F  M + 
Sbjct: 258 LRET--GGEEFGPSVVSF----------------NALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V SYN L++GLC      EA  F  +M   G +PD++TY++L NG      I  A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            K+  + L  G  PD+  Y ILI G C  G +E++ +L   M  +    ++VTY  L+  
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L K+G  D+A+ + + +    L+PD+++Y++ + GLC    + +A E   +   + I P 
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 608 TITWHILVRAVMNNGA 623
           +     ++  +   GA
Sbjct: 480 SFVCSAIISGLFEKGA 495



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +  ++ + L  ++ +GL PD  +Y TVI    K+ DL  A  + ++M +  ++ +
Sbjct: 630 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 689

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+LI+G    G+   A  +   L  + S+    V Y  +I   C  G     L  +
Sbjct: 690 PVTYNVLINGLCVYGNLKDADRLLVTL-QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 748

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +   E     Y + I+ LCK   +  A+  +  M+  GI  D      M++ F R+
Sbjct: 749 HQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRS 808

Query: 290 GKIKECFELWEVMGRKGCLNV 310
           G     FE++ +M + G L V
Sbjct: 809 GDPNSVFEIFAMMIKCGLLPV 829


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 254/490 (51%), Gaps = 20/490 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+YSY  +IN   +   L  ALAV  +M + G E ++V  + L++G+        A  + 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           +++V E    P+ VT+N +I+GL    +  E + + D+M +   + D  TY + ++GLCK
Sbjct: 174 DQMV-EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCK 232

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            G+++ A  + ++M +  I  D V YN +IDG C+   I + F L+  M  KG   +V +
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN LI  L   G+  +A  +   + E+  N +  T   LI+   K               
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK--------------- 337

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              EG+L +A  L + M K     + +T +SL+NGF    +L+ A  +F+ M  K C P 
Sbjct: 338 ---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI GL Q+   DMA K+  
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + +  G  PD+  Y+IL+ GLC  GK+E AL ++  ++K    P++ TYN +++G+ K G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             +   +++  +  + ++P++I Y   + G C      +A     +    G LP +  ++
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 574

Query: 613 ILVRAVMNNG 622
            L+RA + +G
Sbjct: 575 TLIRARLRDG 584



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 251/487 (51%), Gaps = 19/487 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+ +F EM +     ++V +N L+    K   +     + ER+     +  ++ +YN++I
Sbjct: 64  AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERM-QNLRISYDLYSYNILI 122

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+  +    L +  +M K   E D  T  S ++G C +  +  A  +  +MVE G  
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 182

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VT+N +I G     K  E   L + M ++GC  ++V+Y  ++ GL + G +D A+S+
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
            + + +    AD   +  +I+GLCK  +++ A  + N++E  G                 
Sbjct: 243 LKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCN 302

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            GR +DA+ L++ M +     N  T ++L++ F++  KL  A  L+ EM ++   P + +
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y++LING C  +R  EA    + M+ K   P+++TY+ LI G C++K+++  ++L  +  
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           Q+G   +   YN LI GL  AG  + A +++  M      P+++TY+ L+DGL K G  +
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL ++ ++ + ++ PDI +YNI ++G+C   ++ D ++       +G+ P  I +  ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 616 RAVMNNG 622
                 G
Sbjct: 543 SGFCRKG 549



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 237/451 (52%), Gaps = 20/451 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++   A   ++ + E G KPD  ++ T+I+GL        A+A+ D+M +RG + ++
Sbjct: 161 CHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 220

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +++G  K+GD   A  + +++  +  +  +VV YN +I+GLCK    D+   +++
Sbjct: 221 VTYGAVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFN 279

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      D FTY S I  LC  G    A R+   M+E  I  + VT++A+ID F + G
Sbjct: 280 KMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG 339

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E  +L++ M ++    ++ +Y+ LI G   + ++DEA  ++EL+  K+C  +  T+ 
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI G CK             VEEG E        L   M + G   N  T N+L+ G  
Sbjct: 400 TLIKGFCKA----------KRVEEGME--------LFREMSQRGLVGNTVTYNTLIQGLF 441

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           QA   + A  +FK+M   G  P +++Y+ L++GLCK  +  +A    + + +   +PD+ 
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I G+C++ K++    L C    KG  P+V +Y  +I G C  G  E+A  L+  M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           K+   +P+   YNTL+    + GD   + E+
Sbjct: 562 KEDGTLPDSGCYNTLIRARLRDGDKAASAEL 592



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 209/412 (50%), Gaps = 20/412 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC++   + A   L  + +  ++ DV  Y T+I+GL K   +  A A+F++M 
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME 282

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  +V  YN LI      G +  A  +   ++ E  + PNVVT++ +I+   K G+ 
Sbjct: 283 TKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI-ERKINPNVVTFSALIDAFVKEGKL 341

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  +++D M K   + D FTY S I+G C    ++ A+ ++  M+    F + VTYN +
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC+A +++E  EL+  M ++G + N V+YN LI+GL + G  D A  I++ +     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+ +L++GLCK G L KA+ +   ++                  K   + + YT 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQ------------------KSKMEPDIYTY 503

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G  +A K+E+   LF  +S KG  P V+ Y T+I+G C+     EA +  +EM E
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            G  PD   Y+ LI    +      + +L  +    GF  D +  +++I+ L
Sbjct: 564 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL N+++ + NP+  T  AL D+  +E     +  L+  +++R IDP +  + S I 
Sbjct: 309 ASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI- 367

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                   +C  D        +      D   +V      I G      C+ ++ E+   
Sbjct: 368 ------NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-----FCKAKRVEEGME 416

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + ++GL  +  +Y T+I GL ++GD   A  +F +M   GV  +++ Y+IL+DG  
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G   +A  ++E L  ++ + P++ TYN+MI G+CK G+ ++  +++  +     + + 
Sbjct: 477 KYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + I G C+ G  E A+ ++REM E G   D+  YN +I    R G      EL + 
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEA 329
           M   G +   S   ++  +L +G+++++
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGRLEKS 623



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 35/245 (14%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           KL++AI LF EM +    P++V +N L++ + K+++F    S  + M       D+ +Y+
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           +LIN  C+  ++ +AL +  + ++ G+ PD+   + L++G C + ++ DA+ L   M + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 533 NCVPNLVTYNTLMDGLF-----------------------------------KTGDCDKA 557
              P+ VT+NTL+ GLF                                   K GD D A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + + ++  D++ YN  + GLC    + DAF   N    +GI P   T++ L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 618 VMNNG 622
           + N G
Sbjct: 300 LCNYG 304



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 5/189 (2%)

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           +S N L+N      +  +A     EM++    P ++ ++ L++ + + KK D+ + L  +
Sbjct: 51  LSRNALLN-----LKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGER 105

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                 + D+  YNILI+  C   ++  AL +   M K    P++VT ++L++G   +  
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
              A+ + + ++E   +PD +++N  + GL   ++ S+A   ++  + RG  P  +T+  
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225

Query: 614 LVRAVMNNG 622
           +V  +   G
Sbjct: 226 VVNGLCKRG 234


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 246/506 (48%), Gaps = 55/506 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ Q   A   L  + + G  P + +  +++NG      +  A+A+ D+M E G + +
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +  L+ G F+      A  + ER+V++    P++VTY  +INGLCK G  D  L + 
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLL 228

Query: 230 DRMKKNERE-----------------------------------KDSFTYCSFIHGLCKA 254
           ++M+K + E                                    D FTY S I  LC  
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSY 313
           G    A R+  +M+E  I  + VT+N++ID F + GK+ E  +L+ E++ R    N+V+Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G   + ++DEA  I+ L+  K+C  D  T+  LING CK                
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK---------------- 392

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               ++ D   L   M + G   N  T  +L++GF QAS  +NA  +FK+M   G  P +
Sbjct: 393 --AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++YNTL++GLCK  +  +A    + + +   +PD+ TY+++  G+C++ K++    L C 
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              KG  PDV  YN +I G C  G  E+A  L+  MK+   +P+  TYNTL+    + GD
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570

Query: 554 CDKALEIWNHILEERLRPDIISYNIT 579
              + E+   +   R   D  +Y + 
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLV 596



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 247/492 (50%), Gaps = 22/492 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       ++  ++M   GV  N+  YNI+I+   ++     A  I
Sbjct: 63  PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT N ++NG C   R  E + + D+M +   + D+ T+ + +HGL 
Sbjct: 123 LGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NV 310
           +      A  +   MV  G   D VTY A+I+G C+ G+      L   M  KG +  +V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADV 240

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V Y+ +I  L +   VD+A++++  +  K    D  T+  LI+ LC              
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN------------- 287

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR +DA+ L++ M +     N  T NSL++ F +  KL  A  LF EM ++   
Sbjct: 288 -----YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P +V+YN+LING C  +R  EA      M+ K   PD++TY+ LING C++KK+   ++L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                ++G   +   Y  LIHG   A   ++A  ++  M      PN++TYNTL+DGL K
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  +KA+ ++ ++ + ++ PDI +YNI  +G+C   ++ D ++       +G+ P  I 
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522

Query: 611 WHILVRAVMNNG 622
           ++ ++      G
Sbjct: 523 YNTMISGFCKKG 534



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 265/542 (48%), Gaps = 28/542 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D+A+D+F  M +         F      + + ++F+    F   +   G+  ++Y+Y  +
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +   L  ALA+  +M + G   ++V  N L++GF        A  + +++V E  
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMG 165

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+ VT+  +++GL +  +  E + + +RM     + D  TY + I+GLCK G  + A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            +  +M +  I  D V Y+ +ID  C+   + +   L+  M  KG   +V +Y+ LI  L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G+  +A  +   + E+  N +  T   LI+   K                  EG+L 
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK------------------EGKLI 327

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L + M +     N  T NSL+NGF    +L+ A  +F  M  K C P VV+YNTLI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           NG CK ++  +     ++M  +G   + +TY+ LI+G  Q+   D A  +  Q +  G  
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  YN L+ GLC  GK+E A+ ++  ++K    P++ TYN + +G+ K G  +   ++
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  + ++PD+I+YN  + G C      +A+         G LP + T++ L+RA + 
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 621 NG 622
           +G
Sbjct: 568 DG 569



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 236/518 (45%), Gaps = 66/518 (12%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN          A+AL D    E GY      F  ++  L           ++
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193

Query: 62  ELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           E + ++ C  P+ V   +VI    K   PD AL++  +M +        I+      LC+
Sbjct: 194 ERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            R  + A      +  KG++PDV++Y ++I+ L   G    A  +  +M ER +  NVV 
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N LID F K+G  + A+++++ ++ + S+ PN+VTYN +ING C   R DE  +++  M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMI-QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
              +   D  TY + I+G CKA  V     ++R+M   G+  + VTY  +I GF +A   
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
                +++ M   G   N+++YN L+ GL +NGK+++A+ ++E L++     D  T+ ++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             G+CK G          +VE+G +                                   
Sbjct: 492 SEGMCKAG----------KVEDGWD----------------------------------- 506

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
                   LF  +S KG  P V++YNT+I+G CK     EAY+   +M E G  PD  TY
Sbjct: 507 --------LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           + LI    +      + +L  +     F  D + Y ++
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%)

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+D A+ L  + ++    P +  ++ L+  +    K +  +     M+      NL TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            +++ L +      AL I   +++    P I++ N  L G C  +R+S+A   ++  +  
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 603 GILPTTITWHILVRAVMNNGAST 625
           G  P T+T+  LV  +  +  ++
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKAS 187


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 258/511 (50%), Gaps = 22/511 (4%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S+ E  + PDVY+Y  VI    K GD++    V  EM E+  + N+  YN  I G  + G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A E+ ++L+ME  + P+  TY ++++G CK  R  E   +++ M  +    + FTY
Sbjct: 291 AVDEALEV-KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + I G  K GN+E A R+  EM+  G+ ++ VTYNAMI G  +AG++ +   L+  M  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   +  +YN+LI G L++  + +A  +   ++ +       T+ VLI+GLC +  L K
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           A ++L+++   G                 E R   A  L+  M  +G   + +  N L+ 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +A K+E A  L  +M  KG  P   +Y   IN   K      A  + K+ML  G  P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + + Y++LI G C       AL      L+KG  PD+  Y+ +IH L   GK ++A+ ++
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK--GLC 584
               K   VP++  YN+L+ G  K GD +KA ++++ +L   + P+I+ YN  +   G C
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILV 615
               +++AF+  ++ + +GI P    + IL+
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILI 740



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 267/526 (50%), Gaps = 22/526 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++++ ++AK    S+   GL P+ ++Y  +I+G +K G++  AL + DEM  RG++ N
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I G  K G+  +A  ++  ++M   + P+  TYN++I+G  K     +  E+ 
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLM-AGIEPDTWTYNLLIDGYLKSHDMAKACELL 439

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MK  +     FTY   I GLC + +++ A  V  +M+ +G+  +   Y  +I  + + 
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            + +   EL ++M   G L ++  YN LI GL    KV+EA  +   + EK    ++ T+
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  IN   K+G +  A +   ++   G                  G   +A S    M +
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +    +++++   +  K + A+ +F +  + G  P V  YN+LI+G CK     +
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 452 AYSFVKEMLEKGWKPDMITYSLLIN--GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           A     EML  G  P+++ Y+ LIN  G C+S  +  A KL  + + KG +PD  +Y IL
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 739

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G    G +E AL L+   ++++ V +L  +N+L+D   K G   +A E+++ +++++L
Sbjct: 740 IDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 798

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            P+I++Y I +        M +A +   D   R I+P T+T+  L+
Sbjct: 799 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 844



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 258/547 (47%), Gaps = 56/547 (10%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC+    ++A      + EKGL PD ++Y  +++G  K      A  +F+ M   G+ 
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   Y  LIDGF K+G+   A  I + ++    +  NVVTYN MI G+ K G   + + 
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITR-GLKLNVVTYNAMIGGIAKAGEMAKAMS 402

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +++ M     E D++TY   I G  K+ ++  A  +  EM    +     TY+ +I G C
Sbjct: 403 LFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC 462

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            +  +++  E+ + M R G   NV  Y  LI+  ++  + + AI + +++       D  
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  LI GLC+            +VEE        A  L+  M + G K NA+T  + +N
Sbjct: 523 CYNCLIIGLCR----------AKKVEE--------AKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            + ++ +++ A   FK+M   G  P  V Y  LI G C V    EA S  K MLEKG  P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+  YS +I+ L ++ K   A+ +  +FL+ G  PDV +YN LI G C  G +E A QLY
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684

Query: 527 SNMKKRNCVPNLVTYNTLMD--GLFKTGDCDKALEIWNHILEERLRPD------------ 572
             M      PN+V YNTL++  G  K+G+  +A ++++ ++ + + PD            
Sbjct: 685 DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 744

Query: 573 ----------------------IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                                 + ++N  +   C   ++ +A E  +D + + + P  +T
Sbjct: 745 KEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 804

Query: 611 WHILVRA 617
           + IL+ A
Sbjct: 805 YTILIDA 811



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 229/477 (48%), Gaps = 21/477 (4%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G L  A +VF      G    ++C N L+    K        +++  +V E  + P+V T
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMV-EAKIVPDVYT 244

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  +I   CK G   +   +   M+K E + + FTY +FI GLC+ G V+ A  V + M+
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
           E G+  D  TY  ++DGFC+  + KE   ++E M   G   N  +Y  LI G ++ G ++
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           EA+ I + +  +    +  T+  +I G+ K                   G +A A SL N
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAK------------------AGEMAKAMSLFN 405

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M   G + + +T N L++G++++  +  A  L  EM  +  +P+  +Y+ LI+GLC   
Sbjct: 406 EMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
              +A   + +M+  G KP++  Y  LI    Q  + +MA++L    +  G  PD+  YN
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LI GLC A KVE+A  L  +M ++   PN  TY   ++   K+G+   A   +  +L  
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + P+ + Y I +KG C      +A       L +G++P    +  ++ ++  NG +
Sbjct: 586 GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 253/494 (51%), Gaps = 31/494 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--NEI------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I+AY + S  + A+++ + M  N +      + C    LCR ++ E+AK  L  + EK
Sbjct: 491 TLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK 550

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+KP+ ++YG  IN   KSG++  A   F +M   G+  N V Y ILI G    G+ + A
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              + + ++E  + P++  Y+ +I+ L K G+  E + ++ +  K     D F Y S I 
Sbjct: 611 LSTF-KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID--GFCRAGKIKECFELWEVMGRKG- 306
           G CK G++E A ++Y EM+ +GI  + V YN +I+  G+C++G + E F+L++ M  KG 
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGI 729

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +   Y ILI G  + G +++A+S++   ++K+  + S  +  LI+  CK+        
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS-LIDSFCKH-------- 780

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     G++ +A  L + M       N  T   L++ + +A  +E A  LF +M  
Sbjct: 781 ----------GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +   P  ++Y +L+    ++    +  S  K+M  +G   D I Y ++ +  C+  K   
Sbjct: 831 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 890

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           ALKL  + L +G   +  +++ LI  LC   ++   L+L S M K     +  T NTL+ 
Sbjct: 891 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 950

Query: 547 GLFKTGDCDKALEI 560
           G +K+G+ D+A ++
Sbjct: 951 GFYKSGNEDEASKV 964



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 22/367 (5%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + EKGL PD+ +Y  +I+ L K+G    A+ VF +  + GV  +V  YN LI GF K+GD
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMIN--GLCKCGRFDECLEMWDRMKKNEREKDSFT 243
             +A ++++ + +   + PN+V YN +IN  G CK G   E  +++D M       D + 
Sbjct: 677 IEKASQLYDEM-LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYI 735

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM- 302
           YC  I G  K GN+E A  ++ E  +  +      +N++ID FC+ GK+ E  EL++ M 
Sbjct: 736 YCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMV 794

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +K   N+V+Y ILI    +   ++EA  ++  +  +N   ++ T+  L+    + G   
Sbjct: 795 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 854

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           K I +  ++E  G                 EG+  +A  L+N+    G KL     ++L+
Sbjct: 855 KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALI 914

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
               +  ++   + L  EM ++  S +  + NTL+ G  K     EA   +  M   GW 
Sbjct: 915 FHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWV 974

Query: 466 PDMITYS 472
           P  ++ +
Sbjct: 975 PTSLSLT 981



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 188/430 (43%), Gaps = 48/430 (11%)

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK----DSFTYCSFI 248
           W    M T  Y +  +Y+++   LC  G   +   M +++ +  +      DS   C   
Sbjct: 109 WSSSKMSTPQYLH--SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRC--- 163

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
                          YRE   S + V    ++  ID F   G + E   ++     +G  
Sbjct: 164 ---------------YREFGGSNLTV----FDIFIDKFRVLGFLNEASSVFIASISEGFF 204

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             ++  N L+R LL+   +     ++  + E     D  T+  +I   CK G + K   +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L+E+E+                    CK N +T N+ + G  Q   ++ A+ + K M  K
Sbjct: 265 LSEMEKE-------------------CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK 305

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P   +Y  L++G CK +R  EA    + M   G  P+  TY+ LI+G  +   I+ A
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           L++  + + +G   +V  YN +I G+  AG++  A+ L++ M      P+  TYN L+DG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K+ D  KA E+   +   +L P   +Y++ + GLC  S +  A E L+  +  G+ P 
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 608 TITWHILVRA 617
              +  L++A
Sbjct: 486 VFMYGTLIKA 495


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 243/477 (50%), Gaps = 21/477 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + + G +PD  ++ T+I GL   G +  AL +FD+M   G + N
Sbjct: 115 LCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPN 174

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +  R + + +  PNVV ++ +I+ LCK  +  E   ++
Sbjct: 175 VVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       +  TY S IHGLCK    +    +  EMV+S I  D  T N ++D  C+ 
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  ++ ++M  +G   NVV+YN L+ G     +VD A+ +++ +  K+C A+  ++
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   ++KA+ +  E                  M +     N  T N+L++G 
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEE------------------MSRQELTPNTVTYNTLIHGL 395

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM  +G  P +V+Y TL + LCK     +A + +K +    W PD+
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +++G+C++ +++ A  L      KG  P+V  YNI+IHGLC  G + +A +L+S 
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           M K  C PN  TYN +  G  +  +  + +E+   +L      D +S    L G+ S
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLS 571



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 271/552 (49%), Gaps = 32/552 (5%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKGL 131
           D ALS          P   +D  + +  I   +  + +L   RQ +            G+
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSF----------GI 101

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PDVY+   VIN L     +  A +   ++ + G + +   +  LI G   +G    A  
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           ++++++ E    PNVVTY  +INGLCK G     + +   M++   + +   + + I  L
Sbjct: 162 LFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNV 310
           CK   V  A  ++ EM+  GI  + VTYN++I G C+  + K    L  E++  K   +V
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            + N ++  L + G V EA  + +++  +    +  T+  L++G C          + NE
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC----------LRNE 330

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           V+         A  + + M    C  N  + N+L+NG+ +   ++ A++LF+EMSR+  +
Sbjct: 331 VDV--------AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P  V+YNTLI+GLC V R  +A S   EM+ +G  PD++TY  L + LC+++ +D A+ L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                   + PD+ +Y  ++ G+C AG++EDA  L+SN+  +   PN+ TYN ++ GL K
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G   +A ++++ + +    P+  +YN+  +G    +      E L + L RG      T
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562

Query: 611 WHILVRAVMNNG 622
             +LV  + ++G
Sbjct: 563 TTLLVGMLSDDG 574



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 220/434 (50%), Gaps = 19/434 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A    + +  +G +P+V +YGT+INGL K G+   A+ +   M +   + N
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ LID   K      A  I+  ++ +  + PN+VTYN +I+GLCK   +     + 
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLM 268

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  ++   D FT  + +  LCK G V  A  V   M+  G+  + VTYNA++DG C  
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++    ++++ M  K C+ NV+SYN LI G  +   VD+A+ ++E +  +    ++ T+
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GLC  G L  AI + +E+   G+                   L  A +L+  ++ 
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                +     ++++G  +A +LE+A  LF  +S KG  P V +YN +I+GLCK     E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM + G  P+  TY+L+  G  ++ +    ++L  + L +GF+ DV+   +L+ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 512 GLCSAGKVEDALQL 525
            L   G  +   Q+
Sbjct: 569 MLSDDGLDQSVKQI 582



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 206/420 (49%), Gaps = 21/420 (5%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+      A R L S+ +   +P+V  + T+I+ L K   +  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            +F EM  +G+  N+V YN LI G  K  ++     +   +V ++ + P+V T N +++ 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLNTVVDA 289

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G   E  ++ D M     E +  TY + + G C    V+ A +V+  MV      +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            ++YN +I+G+C+   + +   L+E M R+    N V+YN LI GL   G++ +AIS++ 
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            +  +    D  T+  L + LCKN +L+KA+ +L  +E                     G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            L DA  L + +   G + N +T N +++G  +   L  A  LF EM++ GCSP   +YN
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK-LCCQFLQ 496
            +  G  +          ++EML +G+  D+ T +LL+ G+     +D ++K + C+++Q
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVKQILCKYVQ 588



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+  +  +  + L+ A+  F  M  K   P+ V +N L+  + K +      S  ++M  
Sbjct: 39  NTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDS 98

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  PD+ T +++IN LC   ++D A     + L+ G  PD T +  LI GLC  GK+ +
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      PN+VTY TL++GL K G+   A+ +   + +   +P+++ ++  + 
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            LC   ++++AF   ++ + +GI P  +T++ L+  +
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%)

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           S+NT  +         EA S    ML K   P  + ++ L+  + ++K     L L  Q 
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
              G  PDV    I+I+ LC   +V+ A    + + K    P+  T+ TL+ GL   G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +AL +++ ++ E  +P++++Y   + GLC     S A   L         P  + +  L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 615 VRAV 618
           + ++
Sbjct: 217 IDSL 220


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 183/617 (29%), Positives = 292/617 (47%), Gaps = 34/617 (5%)

Query: 2   VISAKRLLNLLKAEKN-PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           V   K L+ +L   +N P  AL  F  A R+ G+  S   +  IL  L    L+     +
Sbjct: 44  VAEPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCV 103

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
           +E +   K    E+  + V+ +  + SMP   L        I      I  +K   EK  
Sbjct: 104 MEKVVSVKM---ENGVIDVVSS-SEVSMPSVKL--------ILDLLLWIYVKKSLLEKCL 151

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLV-KSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                +  KGL PDV +   V+  L  +  ++  A  V++ M E G+   VV YN ++D 
Sbjct: 152 LVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDS 211

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F KKG    A ++  ++       PN VTYNV++NGL   G  ++  E+   M +   E 
Sbjct: 212 FCKKGMVQEALQLLFQM-QAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV 270

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
             +TY   I G C+ G +E A R+  EM+  G     VTYN ++ G C+ G++ +  +L 
Sbjct: 271 SVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLL 330

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           +VM  K  + ++VSYN LI G    G + EA  ++  LR ++      T+  LI+GLC+ 
Sbjct: 331 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRL 390

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G L+ A+++ +E                  M KHG   + +T  + + GF +   L  A 
Sbjct: 391 GDLDVAMRLKDE------------------MIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF EM  +G  P   +Y T I G  K+    +A+   +EML +G+ PD+ITY++ I+GL
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +   +  A +L  + L  G  PD   Y  +IH    AG +  A  L+  M  +   P++
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSV 552

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY  L+      G    A+  +  + E+ + P++I+YN  + GLC   +M  A+ F  +
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612

Query: 599 ALCRGILPTTITWHILV 615
              +GI P   T+ IL+
Sbjct: 613 MQAKGISPNKYTYTILI 629



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 230/497 (46%), Gaps = 41/497 (8%)

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV---METSVYPNVVTYNVMINGLCKC 219
           + G + + + Y++++D   + G    A  + E++V   ME  V   V +  V +  +   
Sbjct: 74  QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSV--- 130

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIH-GLC---------------KAGNVEGAERV 263
            +    L +W  +KK+  EK    +   +  GL                +  N++ A  V
Sbjct: 131 -KLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREV 189

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           Y  MVE GI    VTYN M+D FC+ G ++E  +L   M   GC  N V+YN+L+ GL  
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSH 249

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------ 376
           +G++++A  + + +          T+  LI G C+ G + +A ++  E+   G       
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVT 309

Query: 377 -----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      GR++DA  L++ M       +  + N+L+ G+ +   +  A  LF E+ 
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +  +P+VV+YNTLI+GLC++     A     EM++ G  PD+ T++  + G C+   + 
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           MA +L  + L +G  PD   Y   I G    G    A  +   M  R   P+L+TYN  +
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DGL K G+  +A E+   +L   L PD ++Y   +        +  A     + L +GI 
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF 549

Query: 606 PTTITWHILVRAVMNNG 622
           P+ +T+ +L+ +    G
Sbjct: 550 PSVVTYTVLIHSYAVRG 566



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 37/301 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR    + A R  + + + G  PDV+++ T + G  K G+L  A  +FDEM  RG++ +
Sbjct: 387 LCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPD 446

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y   I G  K GD  +A  + E + +     P+++TYNV I+GL K G   E  E+ 
Sbjct: 447 RFAYITRIVGELKLGDPSKAFGMQEEM-LARGFPPDLITYNVFIDGLHKLGNLKEASELV 505

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  N    D  TY S IH    AG++  A  ++ EM+  GIF   VTY  +I  +   
Sbjct: 506 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVR 565

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI---------------W 333
           G++K     +  M  KG   NV++YN LI GL +  K+D+A +                +
Sbjct: 566 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTY 625

Query: 334 ELLREKNCN--------------------ADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            +L  +NCN                     DS TH  L+  L K+  L+    + N +  
Sbjct: 626 TILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAA 685

Query: 374 G 374
           G
Sbjct: 686 G 686


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 265/516 (51%), Gaps = 31/516 (6%)

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG---ALAVFDEMF 162
           EAG+L      ++A++  + +   GL   V S    I+ L  S DL G   AL VF E  
Sbjct: 194 EAGML------DEARKLFDKMLNYGLLISVDSCNLFISHL--SEDLDGIKIALKVFVEFP 245

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E GV  N   YNI+     + G  + A ++  ++ +   + P+V++Y+ +ING C+ G  
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVINGYCQVGEL 304

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              L++ + M+    + + +TY   I  LCK G V  AERV REM+  GI  D V Y  +
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 283 IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           IDGFC+ G +   + L+ E+  RK   + ++Y  +I GL + G+V EA  ++  +  K  
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  LI+G CK                  EG++ +A SL N+M + G   N  T 
Sbjct: 425 EPDEVTYTALIDGYCK------------------EGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +L +G  +  +++ A  L  EM RKG    + +YN+L+NGLCK     +A   +K+M  
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G+ PD +TY+ L++  C+S+++  A +L  Q L +   P V  +N+L++G C +G +ED
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
             +L   M ++  +PN  TYN+L+       +     EI+  +  + + PD  +YNI +K
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           G C    M +A+    D + +G   T  +++ L++ 
Sbjct: 647 GHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 682



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 239/486 (49%), Gaps = 19/486 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A + L  +  +G  PDV SY TVING  + G+L   L + +EM  +G++ N
Sbjct: 263 LCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I    K G    A+ +   ++ E  + P+ V Y  +I+G CK G       ++
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISE-GIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+K +   D  TY + I GLC+ G V  A++++ EMV   +  D VTY A+IDG+C+ 
Sbjct: 382 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 441

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+KE F L   M + G   N+V+Y  L  GL + G+VD A  +   +  K    +  T+
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L+NGLCK G +++A++++ ++E  G                    +  A  L+ +M  
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 561

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
              +    T N LMNGF  +  LE+   L K M  KG  P   +YN+LI   C       
Sbjct: 562 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 621

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                + M  KG  PD  TY++LI G C+++ +  A  L    + KGF   V+ YN LI 
Sbjct: 622 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 681

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G     K  +A +L+  M++   V +   YN   D  +  G  +  LE+ +  +E+ L  
Sbjct: 682 GFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVG 741

Query: 572 DIISYN 577
           DI + N
Sbjct: 742 DIQTKN 747



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + ++  + +  +  KGLKP+ Y+Y  VI  L K+G +  A  V  EM   G+  + 
Sbjct: 299 CQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 358

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K G+   A  +++ +  +  + P+ +TY  +I GLC+ GR  E  +++ 
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M     E D  TY + I G CK G ++ A  ++ +M++ G+  + VTY A+ DG C+ G
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++    EL   M RKG  LN+ +YN L+ GL + G +D+A+ + + +     + D+ T+ 
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            L++  CK+  + +A ++L ++ +                    G L D   L+  M + 
Sbjct: 538 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 597

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   NA T NSL+  +   + +     +++ M  KG  P   +YN LI G CK     EA
Sbjct: 598 GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 657

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           +   ++M+ KG+   + +Y+ LI G  + KK   A +L  Q  ++G   D  +YNI    
Sbjct: 658 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 717

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
               GK+E  L+L     ++  V ++ T NT
Sbjct: 718 NYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 242/499 (48%), Gaps = 58/499 (11%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V+        LV++G L  A  +FD+M   G+  +V   N+ I    +  D ++ 
Sbjct: 179 GSDPRVFD--IFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK- 235

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             I  ++ +E   +P V        G+C           W+          + +Y    H
Sbjct: 236 --IALKVFVE---FPEV--------GVC-----------WN----------TASYNIITH 261

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LC+ G V  A ++  +M   G   D ++Y+ +I+G+C+ G+++   +L E M  KG   
Sbjct: 262 SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKP 321

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +YN +I  L + GKV EA  +   +  +    D   +  LI+G CK G ++ A ++ 
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +E                  M K     +  T  +++ G  Q  ++  A  LF EM  K 
Sbjct: 382 DE------------------MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V+Y  LI+G CK  +  EA+S   +ML+ G  P+++TY+ L +GLC+  ++D A 
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  +  +KG   ++  YN L++GLC AG ++ A++L  +M+     P+ VTY TLMD  
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+ +  +A E+   +L+  L+P ++++N+ + G C    + D  + L   L +GI+P  
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 609 ITWHILVRA--VMNNGAST 625
            T++ L++   + NN  +T
Sbjct: 604 TTYNSLIKQYCIRNNMRAT 622


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 243/477 (50%), Gaps = 21/477 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + + G +PD  ++ T+I GL   G +  AL +FD+M   G + N
Sbjct: 115 LCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPN 174

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +  R + + +  PNVV ++ +I+ LCK  +  E   ++
Sbjct: 175 VVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       +  TY S IHGLCK    +    +  EMV+S I  D  T N ++D  C+ 
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  ++ ++M  +G   NVV+YN L+ G     +VD A+ +++ +  K+C A+  ++
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   ++KA+ +  E                  M +     N  T N+L++G 
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEE------------------MSRQELTPNTVTYNTLIHGL 395

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM  +G  P +V+Y TL + LCK     +A + +K +    W PD+
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +++G+C++ +++ A  L      KG  P+V  YNI+IHGLC  G + +A +L+S 
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           M K  C PN  TYN +  G  +  +  + +E+   +L      D +S    L G+ S
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLS 571



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 270/552 (48%), Gaps = 32/552 (5%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKGL 131
           D ALS          P   +D  + +  I   +  + +L   RQ +            G+
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSF----------GI 101

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PDVY+   VIN L     +  A +   ++ + G + +   +  LI G   +G    A  
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           ++++++ E    PNVVTY  +INGLCK G     + +   M++   + +   + + I  L
Sbjct: 162 LFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNV 310
           CK   V  A  ++ EM+  GI  + VTYN++I G C+  + K    L  E++  K   +V
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            + N ++  L + G V EA  + +++  +    +  T+  L++G C    ++ A+++ + 
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                             M    C  N  + N+L+NG+ +   ++ A++LF+EMSR+  +
Sbjct: 341 ------------------MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P  V+YNTLI+GLC V R  +A S   EM+ +G  PD++TY  L + LC+++ +D A+ L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                   + PD+ +Y  ++ G+C AG++EDA  L+SN+  +   PN+ TYN ++ GL K
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G   +A ++++ + +    P+  +YN+  +G    +      E L + L RG      T
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562

Query: 611 WHILVRAVMNNG 622
             +LV  + ++G
Sbjct: 563 TTLLVGMLSDDG 574



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 220/434 (50%), Gaps = 19/434 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A    + +  +G +P+V +YGT+INGL K G+   A+ +   M +   + N
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ LID   K      A  I+  ++ +  + PN+VTYN +I+GLCK   +     + 
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLM 268

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  ++   D FT  + +  LCK G V  A  V   M+  G+  + VTYNA++DG C  
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++    ++++ M  K C+ NV+SYN LI G  +   VD+A+ ++E +  +    ++ T+
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GLC  G L  AI + +E+   G+                   L  A +L+  ++ 
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                +     ++++G  +A +LE+A  LF  +S KG  P V +YN +I+GLCK     E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM + G  P+  TY+L+  G  ++ +    ++L  + L +GF+ DV+   +L+ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 512 GLCSAGKVEDALQL 525
            L   G  +   Q+
Sbjct: 569 MLSDDGLDQSVKQI 582



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 200/412 (48%), Gaps = 20/412 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+      A R L S+ +   +P+V  + T+I+ L K   +  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            +F EM  +G+  N+V YN LI G  K  ++     +   +V ++ + P+V T N +++ 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLNTVVDA 289

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G   E  ++ D M     E +  TY + + G C    V+ A +V+  MV      +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            ++YN +I+G+C+   + +   L+E M R+    N V+YN LI GL   G++ +AIS++ 
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            +  +    D  T+  L + LCKN +L+KA+ +L  +E                     G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            L DA  L + +   G + N +T N +++G  +   L  A  LF EM++ GCSP   +YN
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            +  G  +          ++EML +G+  D+ T +LL+ G+     +D ++K
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 580



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 189/431 (43%), Gaps = 27/431 (6%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE--------------IQK 68
            L DS  ++     + ++F  ++ + I P +V + S I  L +              +  
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 69  CYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEK 118
              P+   L +V+ A  K  M  +A DV   M    G E  ++         C + + + 
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH-RGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  +++  K    +V SY T+ING  K   +  A+ +F+EM  + +  N V YN LI 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G    G    A  ++  +V    + P++VTY  + + LCK    D+ + +   ++ +  +
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D   Y + + G+C+AG +E A  ++  +   G+  +  TYN MI G C+ G + E  +L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +  M + GC  N  +YN++ RG L N +    I + E +  +  + D +T  +L+  L  
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           +G      QIL ++    E  L +       M+    KL    C  L        +L+  
Sbjct: 573 DGLDQSVKQILCKIVILYERNLGETLLFQFWMEAPSEKLMVTECEELSMKLTFHEELQEY 632

Query: 418 IFLFKEMSRKG 428
             +  + +RKG
Sbjct: 633 DPMVGDRARKG 643



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+  +  +  + L+ A+  F  M  K   P+ V +N L+  + K +      S  ++M  
Sbjct: 39  NTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDS 98

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  PD+ T +++IN LC   ++D A     + L+ G  PD T +  LI GLC  GK+ +
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      PN+VTY TL++GL K G+   A+ +   + +   +P+++ ++  + 
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            LC   ++++AF   ++ + +GI P  +T++ L+  +
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%)

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           S+NT  +         EA S    ML K   P  + ++ L+  + ++K     L L  Q 
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
              G  PDV    I+I+ LC   +V+ A    + + K    P+  T+ TL+ GL   G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +AL +++ ++ E  +P++++Y   + GLC     S A   L         P  + +  L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 615 VRAV 618
           + ++
Sbjct: 217 IDSL 220


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/510 (31%), Positives = 252/510 (49%), Gaps = 39/510 (7%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+VY+Y  +I G    G+L   L  F EM   G   NVV YN LID + K G   R  
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG---RID 62

Query: 191 EIWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           E +  L   +S  + PN+++YNV+INGLC+ G   E  E+ + M       D  TY + +
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +G CK GN   A  ++ EMV +G+    VTY A+I+  C+A  +    E ++ M  +G  
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N  +Y  LI G    G ++EA  I   + E   +    T+   I+G C          +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC----------V 232

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L  +EE        A  +V  M + G   +  + +++++GF +  +L+ A  + +EM  K
Sbjct: 233 LERMEE--------ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G SP  V+Y++LI GLC++ R  EA    +EML+ G  PD  TY+ LIN  C    ++ A
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 344

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           L L  + + KGF PD   Y++LI+GL    +  +A +L   +     VP+ VTY+TL++ 
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 404

Query: 548 L----FKT------GDCDKAL-----EIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
                FK+      G C K L      ++  ++E   +P    YN+ + G C    +  A
Sbjct: 405 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 464

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
           F    + +  G +P T+T   L++A+   G
Sbjct: 465 FNLYKEMIHSGFVPHTVTVITLIKALFKEG 494



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 222/425 (52%), Gaps = 19/425 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++ + V PNV TYN++I G C  G   + L  +  M++N    +  TY + I   CK G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           ++ A  + + M   G+  + ++YN +I+G CR G +KE +E+ E MG KG   + V+YN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ G  + G   +A+ I   +     +    T+  LIN +CK   LN+A++  ++     
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ----- 175

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G + N  T  +L++GF +   L  A  +  EM+  G SP+VV+
Sbjct: 176 -------------MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 222

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN  I+G C +ER  EA   V+EM+EKG  PD+++YS +I+G C+  ++D A ++  + +
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +KG +PD   Y+ LI GLC   ++ +A  L   M      P+  TY TL++     GD +
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL + + ++ +   PD ++Y++ + GL   +R  +A   L   +    +P+ +T+  L+
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402

Query: 616 RAVMN 620
               N
Sbjct: 403 ENCSN 407



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 227/471 (48%), Gaps = 35/471 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + ++A   L S+  KG++P++ SY  +INGL + G +  A  + +EM  +G   + 
Sbjct: 56  CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 115

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN L++G+ K+G++ +A  I   +V    V P+VVTY  +IN +CK    +  +E +D
Sbjct: 116 VTYNTLLNGYCKEGNFHQALVIHAEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  TY + I G  + G +  A R+  EM ESG     VTYNA I G C   
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +++E   + + M  KG   +VVSY+ +I G    G++D A  + + + EK  + D+ T+ 
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI GLC+                    RL +A  L   M   G   + +T  +L+N + 
Sbjct: 295 SLIQGLCE------------------MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L  A+ L  EM  KG  P  V+Y+ LINGL K  R  EA   + +++ +   P  +
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396

Query: 470 TYSLLIN---------------GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           TY  LI                G C    +  A ++    +++   P   +YN++IHG C
Sbjct: 397 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 456

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
             G +  A  LY  M     VP+ VT  TL+  LFK G  ++  E+    L
Sbjct: 457 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 224/484 (46%), Gaps = 47/484 (9%)

Query: 65  EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
           E+++  C  +V    ++I AY K    D+A  + + M+   G +  +         LCR+
Sbjct: 35  EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCRE 93

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
              ++A   L  +  KG  PD  +Y T++NG  K G+   AL +  EM   GV  +VV Y
Sbjct: 94  GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 153

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI+   K  +  RA E ++++ +   + PN  TY  +I+G  + G  +E   + + M 
Sbjct: 154 TALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           ++       TY +FIHG C    +E A  V +EMVE G+  D V+Y+ +I GFCR G++ 
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272

Query: 294 ECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             F++ + M  KG   + V+Y+ LI+GL E  ++ EA  + + + +     D  T+  LI
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           N  C  G LNKA+ + +E                  M   G   +A T + L+NG  + +
Sbjct: 333 NAYCVEGDLNKALHLHDE------------------MIHKGFLPDAVTYSVLINGLNKQA 374

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLIN---------------GLCKVERFGEAYSFVK 457
           +   A  L  ++  +   P+ V+Y+TLI                G C      EA    +
Sbjct: 375 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFE 434

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+E+  KP    Y+++I+G C+   +  A  L  + +  GF P       LI  L   G
Sbjct: 435 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 494

Query: 518 KVED 521
             E+
Sbjct: 495 MNEE 498



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 175/435 (40%), Gaps = 54/435 (12%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLV-----VHVSRILELIE------ 65
           N  T   L D  +R+     +  + + +      P +V     +H   +LE +E      
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243

Query: 66  ---IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
              ++K   P+ V+ S +I  + +    D+A  + Q M E         +      LC  
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+  +A      + + GL PD ++Y T+IN     GDL  AL + DEM  +G   + V Y
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN---------------GLCK 218
           ++LI+G  K+     AK +  +L+ E SV P+ VTY+ +I                G C 
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCM 422

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G   E   +++ M +   +     Y   IHG C+ GN+  A  +Y+EM+ SG     VT
Sbjct: 423 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 482

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSY-NILIRGLLENGKVDEAISIWELLR 337
              +I    + G  +E  E+     R   LN      +L+    + G ++  +++  L  
Sbjct: 483 VITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYN 542

Query: 338 EKN--CNADSTTHGVLINGLCK-------NGYLNKAIQILNEVEEGGE-----GRLADAA 383
           + +  C A S   G L     K         +   A+     V EGGE     G   + A
Sbjct: 543 KLSLKCVASSVPPGALTQTSQKIFLSRIIANFDGTAVDGAAHVGEGGELFKGLGGFVETA 602

Query: 384 SLVNRMDKHGCKLNA 398
           +     D+ G K   
Sbjct: 603 ATDGNFDEFGVKFGG 617



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 46/95 (48%)

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    PN+ TYN L+ G    G+  K L  +  +      P++++YN  +   C   R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +AF  L     +G+ P  I++++++  +   G+
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 286/617 (46%), Gaps = 38/617 (6%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV---HVSRILELIEIQKCYCPEDVALS 78
           + ++ +  R  G++ +  +F+ + R+   P L      +S +++  E +KC         
Sbjct: 155 IHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKC-------CE 207

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           V +   + + PD    VF   N I       LC+  + E A      + + G+ P+V +Y
Sbjct: 208 VFRVMSEGACPD----VFSFTNVI-----NALCKGGKMENAIELFMKMEKLGISPNVVTY 258

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +INGL ++G L  A  + ++M  +GV+ N+  Y  LI+G  K   + +   I + ++ 
Sbjct: 259 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI- 317

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                PNVV +N +I+G CK G  +  L++ D M        S T  S + G CK+  +E
Sbjct: 318 GAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 377

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILI 317
            AE    E++ SG+ +      +++   C+  +    F   ++M  R    + +   +L+
Sbjct: 378 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 437

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            GL ++GK  EA  +W  L EK   A   T   LI+GLC  G L +A +I+ E+ E G  
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG++     L   M K G + + YT N L+ G     KL++AI L
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           + E    G    + +Y  ++ G CK  R  +  +   E+L K  + + I Y+++I   CQ
Sbjct: 558 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 617

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +  +  AL+L      KG  P+   Y+ LIHG+C+ G VEDA  L   M+K   VPN+V 
Sbjct: 618 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 677

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ G  K G  D A   W  ++   + P+  +Y + + G C    M  A   L    
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737

Query: 601 CRGILPTTITWHILVRA 617
             GI+P  +T+++L   
Sbjct: 738 ESGIVPDVVTYNVLTNG 754



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 258/563 (45%), Gaps = 35/563 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           S++  YG  ++P   LD  +   EI     G+     +FE         W +     ++ 
Sbjct: 109 SILIVYG--NLPVLNLDSEKFHIEIANALFGLTSVVGRFE---------WTQAFDLLIHV 157

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y T    L  S     A+ VF  +  +G   ++   N  +    K  ++ +  E++   V
Sbjct: 158 YSTQFRNLGFSC----AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFR--V 211

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M     P+V ++  +IN LCK G+ +  +E++ +M+K     +  TY   I+GLC+ G +
Sbjct: 212 MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 271

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNIL 316
           + A  +  +M   G+  +  TY A+I+G  +     +   +  E++G     NVV +N L
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I G  + G ++ A+ I +++  KN    S T   L+ G CK+  +  A   L E+   G 
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           + R   A      M     + +      L+ G  +  K   A  
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 451

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L+  +  KG   + V+ N LI+GLC   +  EA   VKEMLE+G   D ITY+ LI G C
Sbjct: 452 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 511

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
              K++   +L  +  ++G  PD+  YN L+ GLC+ GK++DA++L+   K    + N+ 
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY  +M+G  K    +    ++N +L +++  + I YNI +K  C    ++ A + L + 
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
             +GILP   T+  L+  V N G
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIG 654



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+      A + L ++  KG+ P+  +Y ++I+G+   G +  A  + DEM + G   NV
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           VCY  LI G+ K G    A+  W  ++   +++PN  TY VMI+G CK G  ++   +  
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMI-SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLI 734

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +MK++    D  TY    +G CKA +++ A +V  +M   G+ VD +TY  ++ G+
Sbjct: 735 KMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/594 (28%), Positives = 283/594 (47%), Gaps = 38/594 (6%)

Query: 30  REPGYAHSPHLFHHILRRLI----DPKLVVHVSRILE-LIEIQKCYCPEDVALSVIQAYG 84
           R   +  SP+ F   ++       D K+  +  R+   L++I+K     D A+++ Q+  
Sbjct: 28  RNAAFFQSPYEFFFCVQGFSGLTSDRKMSSYKERLRSGLVDIKK-----DDAVALFQSM- 81

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
              +  + L      N +FG    +L R +Q++        +  KG+  D+Y+   +IN 
Sbjct: 82  ---LRSRPLPTVIDFNRLFG----LLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINC 134

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
             +   L  A +   ++F+ G E N V +N L++G   +G    A E+ + +V+   V P
Sbjct: 135 FCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV-P 193

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +++T N ++NGLC   R  E +++  RM  N  + + FTY   ++ +CK+GN   A  + 
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           R+M    I    VTY  +ID  C+ G++ +    +  M  KG   NV +YN LI      
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ D+   +   +  +    +  T   LI+ L K                  EG+L +A 
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK------------------EGKLTEAK 355

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L N M   G + N  T NSL+ G     +L+ A  +   M  KGC P + +YN LING 
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK ++  +     ++M  +G   D +TYS LI G CQS+K+ +A K+  + + +G  P +
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGI 475

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y IL+ GLC  G++E+AL +   M K     ++  YN ++ G+      D A  ++  
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +  + ++ DI SYNI L GLC  S +S+A          G  P   T++ L+RA
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 244/482 (50%), Gaps = 39/482 (8%)

Query: 59  RILELIEIQKC-----YCPEDVAL-SVIQAYGKNSMPDKALDVFQRM-------NEI-FG 104
           R+ E +E+  C     + P+ + L +++          +A+D+  RM       N+  +G
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                +C+      A   L  +  + +KP V +Y  +I+ L K G L  AL+ F EM  +
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G++ NV  YN LI  F   G +    ++   ++    + PNVVT++ +I+ L K G+  E
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR-KITPNVVTFSALIDSLVKEGKLTE 353

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++++ M     E ++ TY S I+GLC    ++ A ++   MV  G   D  TYN +I+
Sbjct: 354 AKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILIN 413

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           GFC+A ++ +   L+  M  +G + + V+Y+ LI+G  ++ K+  A  +++ +  +  + 
Sbjct: 414 GFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHP 473

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK--LNAYTC 401
              T+ +L++GLC NG L +A+ IL+++                    H CK  L+    
Sbjct: 474 GIMTYAILLDGLCDNGELEEALGILDQM--------------------HKCKMELDIGIY 513

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N +++G   A+K+++A  LF  +  KG    + SYN +++GLCK     EA +  ++M E
Sbjct: 514 NIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKE 573

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G++PD  TY+ LI    +   I  +++L  +  + GF+ D +   I++  L S+G+++ 
Sbjct: 574 DGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDK 632

Query: 522 AL 523
           + 
Sbjct: 633 SF 634



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 19/332 (5%)

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  +   L++ M R   L  V+ +N L   L    + D  +++ + +  K    D  T  
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           ++IN  C+                    +L  A S + ++ K G + N  T N+L+NG  
Sbjct: 130 IMINCFCR------------------RRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLC 171

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              ++  A+ L   M      P +++ NT++NGLC  +R  EA   +  M+  G +P+  
Sbjct: 172 LEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQF 231

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY  ++N +C+S     AL L  +   +   P V  Y I+I  LC  G+++DAL  +S M
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           + +    N+ TYN+L+      G  D   ++   ++  ++ P++++++  +  L    ++
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           ++A +  N+ + RGI P TIT++ L+  + N+
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 124/242 (51%)

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           +L  +M+  G   + YT N ++N F +  KL  A     ++ + G  P  V++NTL+NGL
Sbjct: 111 ALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGL 170

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C   R  EA   V  M+     PD+IT + ++NGLC   ++  A+ L  + +  G  P+ 
Sbjct: 171 CLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQ 230

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  +++ +C +G    AL L   M+ R   P++VTY  ++D L K G  D AL  ++ 
Sbjct: 231 FTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSE 290

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  + ++ ++ +YN  +   CS  R  D  + L D + R I P  +T+  L+ +++  G 
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350

Query: 624 ST 625
            T
Sbjct: 351 LT 352


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 305/631 (48%), Gaps = 30/631 (4%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +  +LL+ L+ E++    + LF  A+++P +  S  +F  +L +L        +  IL+ 
Sbjct: 55  TPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKE 114

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKR 114
           ++I       D  L  I++Y    + ++ L     M   FG  A          +L    
Sbjct: 115 MKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGN 174

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + +  +   +++  +G++PDV ++  +I  L ++  +  A+ + +EM + G+  +   + 
Sbjct: 175 KLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFT 234

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++ GF ++G+   A  + E++V E       VT NV++NG CK GR +E L   + M  
Sbjct: 235 TIMQGFIEEGNLDGAMRVKEQMV-EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSL 293

Query: 235 NERE-KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            E    D +T+   ++GL K G+V+ A  V   M+  G   D  TYN++I G C+ G++ 
Sbjct: 294 REGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVD 353

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  ++   M  + C  N V+YN +I  L +  +V+EA  +  +L  K    D  T+  LI
Sbjct: 354 EAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLI 413

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            GLC +     A+++  E                  M   GC  + +T N L++      
Sbjct: 414 QGLCLSRNHTVAMELYKE------------------MKTKGCHPDEFTYNMLIDSLCFRG 455

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           KL+ A+ L KEM   GC+  V++YNTLI+G CK +R  EA     +M  +G   + +TY+
Sbjct: 456 KLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYN 515

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+GLC+S++++ A +L  Q + +G  PD   YN L+   C AG ++ A  +   M   
Sbjct: 516 TLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASD 575

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            C P++VTY TL+ GL K G  + A ++   I  + +     +YN  ++ L    R  +A
Sbjct: 576 GCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEA 635

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
                + + +   P  +T+ I+ R +   G 
Sbjct: 636 VRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 242/517 (46%), Gaps = 72/517 (13%)

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFL 123
           E    +++Q + +    D A+ V ++M E  GC              C++ + E+A RF+
Sbjct: 230 EKTFTTIMQGFIEEGNLDGAMRVKEQMVEA-GCVVTNVTVNVLVNGFCKEGRIEEALRFI 288

Query: 124 NSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             +   +G  PD Y++  ++NGL K+G +  AL V D M   G + ++  YN LI G  K
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+   A ++  +++ E    PN VTYN +I+ LCK  + +E  ++   +       D  
Sbjct: 349 LGEVDEAVKVLNQMI-ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVC 407

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC + N   A  +Y+EM   G   D  TYN +ID  C  GK++E   L + M
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC  NV++YN LI G  +N ++ EA  I++ +  +  + +S T+  LI+GLCK+  +
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV 527

Query: 362 NKAIQILNE-VEEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            +A Q++++ + EG                  G +  AA +V  M   GC+ +  T  +L
Sbjct: 528 EEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTL 587

Query: 405 MNGFIQASKLE-----------------------------------NAIFLFKEMSRKGC 429
           + G  +A ++E                                    A+ LF+EM  K  
Sbjct: 588 IAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAE 647

Query: 430 SPTVVSYNTLINGLCKVE-RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           +P  V+Y  +  GLC+     GEA  FV EMLE+G+ P+  ++ +L  GL     +   +
Sbjct: 648 APDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLI 707

Query: 489 KLCCQFLQKGFTPD--VTMYNILIHGLCSAGKVEDAL 523
           KL    ++K    D  VTM    I G     K +DAL
Sbjct: 708 KLIDMVMEKAKFSDNEVTM----IRGFLKISKYQDAL 740


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 181/645 (28%), Positives = 304/645 (47%), Gaps = 38/645 (5%)

Query: 3   ISAKRLLNLLKAEKN---PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +AE     P TALA F+   R  G+ H+      +L  L   +      R
Sbjct: 52  VTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYER 111

Query: 60  ILELIEIQKCY-CPEDVALSV--IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           ++  + +  C    ED+ +S   IQA  +      AL       + +      L R    
Sbjct: 112 LV--VSMLNCSDTAEDMRVSADAIQAIRRTGSARLALS-----PKCYNFALRSLARFDMT 164

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E   R  + L + GL PD  +Y T+I    K GDL  A   F  + E G+E      N L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL 224

Query: 177 IDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           + G+ + G+  +A   W  L+M       N  +Y ++I GLC+     E L ++  MK++
Sbjct: 225 VLGYCRTGELRKA--CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRD 282

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               +   +   I GLCK+G V  A  ++  M ++G+    +TYNAMI G+ + G++ + 
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++ E+M + GC  +  +YN LI GL +  K +EA  +     ++       T   LING
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLING 401

Query: 355 LCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLN 397
            C     + A+++ N++                     + RL +A  L+N +  +G   N
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T  S+++G+ ++ K++ A+ + K M R GC P   +YN+L+ GL K ++  +A + + 
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M + G  P++ITY+ L+ G C     D A +L     Q G  PD   Y +L   LC AG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + E+A   YS + ++      V Y TL+DG  K G+ D A  +   +++E   PD  +Y+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + L  LC   R+++A   L+    RGI  T   + IL+  ++  G
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 256/546 (46%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   +F+ A R  N +     K D+  +G +IN L+K   L  A  + +E+   G+  NV
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  +IDG+ K G    A E+  +++      PN  TYN ++ GL K  +  + + +  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+K+    +  TY + + G C   + + A R++  M ++G+  D   Y  + D  C+AG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V Y  LI G  + G  D A ++ E + ++ C  DS T+ 
Sbjct: 582 RAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL++ LCK   LN+A+ IL+++   G                 EG+   A  + N M   
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    +N + +  +LE+A  L  +M R+G +P VV+YN LI+G   +     A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSK----------------KIDMALKLCCQFLQ 496
           +S +K M+    +P+  TY LL+  L +                  ++D+  +L  + ++
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P VT Y+ LI G C AG++E+A  L  +M  +   PN   Y  L+     T   +K
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           AL   + + E   +P + SY + + GLC+            D L  G     + W IL  
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 617 AVMNNG 622
            ++  G
Sbjct: 939 GLLKAG 944



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 266/563 (47%), Gaps = 62/563 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  +   +A      +   G  P+V ++  +I+GL KSG +  A  +FD M + GV  +
Sbjct: 263 LCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 322

Query: 170 VVCYNILIDGFFKKG---DYMRAKEIWER-------LVMETSVY---------------- 203
           V+ YN +I G+ K G   D ++ KE+ E+           T +Y                
Sbjct: 323 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNN 382

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                  P VVT+  +ING C   +FD+ L M ++M  ++ + D   +   I+ L K   
Sbjct: 383 AVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR 442

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A+ +  E+  +G+  + +TY ++IDG+C++GK+    E+ ++M R GC  N  +YN 
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ GL+++ K+ +A+++   +++     +  T+  L+ G C     + A ++   +E+ G
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR  +A S + R    G  L      +L++GF +A   + A 
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAA 619

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + M  +GC+P   +Y+ L++ LCK +R  EA   + +M  +G K  +  Y++LI+ +
Sbjct: 620 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 679

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +  K D A ++  +    G  P  T Y + I+  C  G++EDA  L   M++    P++
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 739

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTYN L+DG    G  D+A      ++     P+  +Y + LK L     +     ++  
Sbjct: 740 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL-----LKGNLAYVRS 794

Query: 599 ALCRG---ILPTTITWHILVRAV 618
               G   ++   ITW +L R V
Sbjct: 795 VDTSGMWNLIELDITWQLLERMV 817



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 215/435 (49%), Gaps = 13/435 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +  F+ A R    + + GLKPD ++Y  + + L K+G    A   +  +  +GV    
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTK 599

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K G+   A  + ER++ E    P+  TY+V+++ LCK  R +E L + D
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCT-PDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     +   F Y   I  + + G  + A+R+Y EM  SG    A TY   I+ +C+ G
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 718

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++  +L   M R+G   +VV+YNILI G    G +D A S  + +   +C  +  T+ 
Sbjct: 719 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 778

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+  L K       +  +  V+  G   L +      L+ RM KHG      T +SL+ 
Sbjct: 779 LLLKHLLKGN-----LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A +LE A  L   M  KG SP    Y  LI   C  + F +A SFV  M E G++P
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y LL+ GLC     +    L C  L+ G+  D   + IL  GL  AG V+   Q+ 
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 527 SNMKKRNCVPNLVTY 541
           S M+KR C  +  TY
Sbjct: 954 SIMEKRYCCISSQTY 968



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 242/531 (45%), Gaps = 38/531 (7%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ++FG     L +K + ++AK  LN +   GL P+V +Y ++I+G  KSG +  AL V   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G + N   YN L+ G  K     +A  +  ++  +  + PNV+TY  ++ G C   
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEH 546

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FD    +++ M++N  + D   Y      LCKAG    AE  Y  +V  G+ +  V Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYT 603

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +IDGF +AG       L E M  +GC  +  +Y++L+  L +  +++EA+ I + +  +
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
                   + +LI+ + + G  + A ++ NE+   G                 EGRL DA
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+ +M++ G   +  T N L++G      ++ A    K M    C P   +Y  L+  
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKH 783

Query: 443 LCK--------VERFGE--------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           L K        V+  G          +  ++ M++ G  P + TYS LI G C++ +++ 
Sbjct: 784 LLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 843

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L      KG +P+  +Y +LI   C     E AL   S M +    P L +Y  L+ 
Sbjct: 844 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           GL   GD +K   ++  +LE     D +++ I   GL     +   F+ L+
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 954


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 167/586 (28%), Positives = 283/586 (48%), Gaps = 36/586 (6%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           NP  A  L    T      H+ H FH ++R    P L      +  L +I K Y      
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKI-KHYS----- 86

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             V   Y +  +   + D    +N +  C    LC   +  +       +  +G  P++ 
Sbjct: 87  -QVFSLYNQMRLSGLSSDRCT-LNILLNC----LCNVNRLREGFAAFAGILRRGYSPNIV 140

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+I GL     +  A  +F  M + G   +VV Y  LI G    G+   A ++ + +
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 197 VMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + + S Y     PNV+TYN++++GLCK GR DE  ++++ MK         +Y S IHG 
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           C AG  E ++R+  EM++ G+  D VT+N +ID  C+ GK+ E  +L  VM   G + ++
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+YN LI G    G ++ A  ++  +  K C  D  ++ VLING  K   + +A+++ NE
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                             M   G + N  T +SL+ G   A K+++A  LF  M   G +
Sbjct: 381 ------------------MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
               +Y   ++GLCK +   EA     E+    +K ++   + LI+GLC++ K++ A +L
Sbjct: 423 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 482

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +   +G  P+V  Y I+IHG C  G+V+ A  L   M+   C P+++TYNTLM G ++
Sbjct: 483 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 542

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +   ++ +++ + + ++ + PD I+ +I +  L    +  +    L
Sbjct: 543 SNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 248/508 (48%), Gaps = 30/508 (5%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A  F + +      P + S+  +++GL K        +++++M   G+ ++    NIL++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 179 GFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
                 +  R +E +     ++     PN+VTYN +I GLC   R  E   ++ RM+K  
Sbjct: 113 CLC---NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMV------ESGIFVDAVTYNAMIDGFCRAG 290
              D  TY + I GLC  GN+  A ++++EM+      E     + +TYN ++DG C+ G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  E  +L+E M  +G + +++SYN LI G    GK +E+  + + + ++    D  T  
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLI+ LCK                  EG++ +A  L+  M + G   +  T NSL+ GF 
Sbjct: 290 VLIDTLCK------------------EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L +A  LF  M  KGC P V+SYN LING  K  +  EA     EML  G +P++I
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY  L+ G+  + K+D A KL       G   +   Y I + GLC    + +A++L++ +
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K  N    +   N L+DGL K G  + A E++  +  E   P++++Y I + G C   ++
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRA 617
             A   +      G  P  IT++ L+R 
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRG 539



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 219/410 (53%), Gaps = 19/410 (4%)

Query: 217 CKCGRFD--ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           CK G       L  +  M ++       ++   + GL K  +      +Y +M  SG+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
           D  T N +++  C   +++E F  +  + R+G   N+V+YN LI+GL    ++ EA  ++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH- 392
             +++  C  D  T+G LI GLC  G +N A+++  E              ++N + ++ 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQE--------------MLNDISRYE 208

Query: 393 -GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             CK N  T N +++G  +  + + A  LF+EM  +G  P+++SYN+LI+G C   ++ E
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +   + EML++G +PDM+T+++LI+ LC+  K+  A KL    ++ G  PD+  YN LI 
Sbjct: 269 SKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 328

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G +  A +L+ +M  + C P++++YN L++G  KT   ++A++++N +L    RP
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 388

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           ++I+Y+  LKG+    ++ DA +  +     GI   + T+ I +  +  N
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKN 438



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 222/452 (49%), Gaps = 24/452 (5%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            L+M ++  P++ ++N +++GL K   + +   ++++M+ +    D  T    ++ LC  
Sbjct: 58  HLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNV 117

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             +      +  ++  G   + VTYN +I G C   +I E   L+  M + GC  +VV+Y
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177

Query: 314 NILIRGLLENGKVDEAISI-WELLR-----EKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             LI+GL   G ++ A+ +  E+L      E NC  +  T+ ++++GLCK G  ++A Q+
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
             E++  G                  G+  ++  L++ M   G + +  T N L++   +
Sbjct: 238 FEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCK 297

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             K+  A  L   M   G  P +V+YN+LI G C V     A      M  KG +PD+I+
Sbjct: 298 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 357

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++LING  ++ K++ A+KL  + L  G  P+V  Y+ L+ G+  AGKV+DA +L+S MK
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
                 N  TY   +DGL K     +A++++  +     + +I + N  + GLC   ++ 
Sbjct: 418 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 477

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            A+E        G  P  +T+ I++      G
Sbjct: 478 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 509



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 186/380 (48%), Gaps = 27/380 (7%)

Query: 252 CKAGNVEG--AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
           CK GNV    A   +  M+ S       ++N ++ G  +     + F L+  M   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +  + NIL+  L    ++ E  + +  +  +  + +  T+  LI GLC            
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCM----------- 151

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM---- 424
                  E R+++A  L  RM K GC  +  T  +L+ G      +  A+ L +EM    
Sbjct: 152 -------EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 425 SRK--GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           SR    C P V++YN +++GLCKV R  EA    +EM  +G  P +I+Y+ LI+G C + 
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K + + +L  + L +G  PD+  +N+LI  LC  GKV +A +L   M +   VP+LVTYN
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L++G    GD + A E++  +  +   PD+ISYN+ + G     ++ +A +  N+ L  
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 603 GILPTTITWHILVRAVMNNG 622
           G  P  IT+  L++ +   G
Sbjct: 385 GKRPNVITYDSLLKGIFLAG 404



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/93 (22%), Positives = 42/93 (45%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q +KA   +  +   G  PD+ +Y T++ G  +S  L   + +   M ++ V  +
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            +  +I++D   K   Y     +  R  ++  V
Sbjct: 565 AITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 254/514 (49%), Gaps = 19/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A   L+ +  +G  P    Y   +    ++    GA+ V  ++  RG   +
Sbjct: 121 LCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALD 180

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V   N+++     +G    A  +   L+      P+VV+YN ++ GLC   R+    ++ 
Sbjct: 181 VGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLM 240

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       +  T+ + I  LC+ G  E    V+ +M E G   D   Y  +IDG C+ 
Sbjct: 241 EEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKE 300

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +++    +   M   G   NVV YN L++GL    + +EA  +   + +K+C  D  T 
Sbjct: 301 ERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF 360

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++ LC+NG +++ I++L +                  M +HGC  +  T  +++NGF
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQ------------------MLEHGCMPDVITYTTVINGF 402

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L + M+  GC P  VSY  ++ GLC  ER+ +A   + +M+++G  P+ 
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++ LIN LC+   ++ A++L  Q L  G +PD+  Y+ +I GL  AG  ++AL+L + 
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M K+   PN + Y+++   L   G  +K ++++ +I +  +R D + YN  +  LC    
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A EFL   +  G +P   T+ IL+R + + G
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEG 616



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 248/504 (49%), Gaps = 21/504 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETN 169
           CR   F  A   L  L  +G   DV +   V+  +   G +  A+ +  ++    G E +
Sbjct: 157 CRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPD 216

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN ++ G      +   +++ E +V      PN+VT++ +I  LC+ G F+   E+ 
Sbjct: 217 VVSYNAVLRGLCMARRWGHVQDLMEEMV-AAGCPPNIVTFSTLIGHLCRNGLFERVHEVH 275

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M ++    D   Y + I G+CK   +E A  +   M   G+  + V YN ++ G C A
Sbjct: 276 AQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSA 335

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            + +E   L   M  K C L+ V++NIL+  L +NG VD  I + E + E  C  D  T+
Sbjct: 336 DRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITY 395

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +ING CK G +++A+ +L                    M   GC+ N  +   ++ G 
Sbjct: 396 TTVINGFCKEGLIDEAVMLLRS------------------MAACGCRPNTVSYTIVLKGL 437

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A +  +A  L  +M ++GC P  V++NTLIN LCK     +A   +K+ML  G  PD+
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 497

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+YS +I+GL ++   D AL+L    ++KG +P+  +Y+ +   L   G++   +Q++ N
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFEN 557

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++      + V YN ++  L K G+ D+A+E   +++     P+  +Y I ++GL S   
Sbjct: 558 IQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 617

Query: 589 MSDAFEFLNDALCRGILPTTITWH 612
           + +A E L +   +G L   +  H
Sbjct: 618 VKEAQEILTELCSKGALRKHLMKH 641



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 218/469 (46%), Gaps = 23/469 (4%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN ++ G+ + G    A+ +         V PN  TY  ++  LC  GR  + L + D M
Sbjct: 82  YNAMVAGYCRAGQLAAARRL----AASVPVAPNAYTYFPLVRALCARGRIADALAVLDDM 137

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +         Y   +   C+A    GA  V R++   G  +D    N ++   C  G +
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197

Query: 293 KECFELW-EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            E   L  +++   GC  +VVSYN ++RGL    +      + E +    C  +  T   
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI  LC+NG   +  ++  ++ E G                 E RL  A  ++NRM  +G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N    N+L+ G   A + E A  L  EM  K C    V++N L++ LC+        
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             +++MLE G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ GL
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           CSA +  DA +L S M ++ C PN VT+NTL++ L K G  ++A+E+   +L     PD+
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 497

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ISY+  + GL       +A E LN  + +G+ P TI +  +  A+   G
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEG 546



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 186/397 (46%), Gaps = 20/397 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G LCR   FE+       + E G  PDV  Y T+I+G+ K   L  A  + + M 
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G+  NVVCYN L+ G      +  A+ +   +  +     + VT+N++++ LC+ G  
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM-FDKDCPLDDVTFNILVDFLCQNGLV 373

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D  +E+ ++M ++    D  TY + I+G CK G ++ A  + R M   G   + V+Y  +
Sbjct: 374 DRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIV 433

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           + G C A +  +  EL   M ++GC  N V++N LI  L + G V++AI + + +    C
Sbjct: 434 LKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 493

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           + D  ++  +I+GL K G  ++A+++LN                   M K G   N    
Sbjct: 494 SPDLISYSTVIDGLGKAGNTDEALELLNV------------------MVKKGMSPNTIIY 535

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           +S+ +      ++   I +F+ +         V YN +I+ LCK      A  F+  M+ 
Sbjct: 536 SSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVS 595

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
            G  P+  TY++LI GL     +  A ++  +   KG
Sbjct: 596 SGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 254/494 (51%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  ++Y+Y  +IN   +   L  ALAV  +M + G E ++V  N L++GF        A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  ++V E    P+  T+N +I+GL +  R  E + + DRM     + D  TY   ++
Sbjct: 171 VSLVGQMV-EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK G+++ A  + ++M +  I    V YN +ID  C    + +   L+  M  KG   
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+YN LIR L   G+  +A  +   + E+  N +  T   LI+   K           
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK----------- 338

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  EG+L +A  L + M K     + +T +SL+NGF    +L+ A  +F+ M  K 
Sbjct: 339 -------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI+G  Q+++ D A 
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  Q +  G  PD+  Y+IL+ GLC+ GKVE AL ++  +++    P++ TYN +++G+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  +   +++  +  + ++P++++Y   + G C      +A     +    G LP +
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

Query: 609 ITWHILVRAVMNNG 622
            T++ L+RA + +G
Sbjct: 572 GTYNTLIRAHLRDG 585



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 248/492 (50%), Gaps = 30/492 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEK 129
           +I  + + S    AL V  +M ++ G E  I+         C   +   A   +  + E 
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G +PD +++ T+I+GL +      A+A+ D M  +G + ++V Y I+++G  K+GD   A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++  +  + P VV YN +I+ LC     ++ L ++  M       +  TY S I 
Sbjct: 241 LSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LC  G    A R+  +M+E  I  + VT++A+ID F + GK+ E  +L++ M ++    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++ +Y+ LI G   + ++DEA  ++EL+  K+C  +  T+  LI G CK           
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK----------A 409

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             V+EG E        L   M + G   N  T  +L++GF QA + +NA  +FK+M   G
Sbjct: 410 KRVDEGME--------LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P +++Y+ L++GLC   +   A    + +     +PD+ TY+++I G+C++ K++   
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L C    KG  P+V  Y  ++ G C  G  E+A  L+  MK+   +P+  TYNTL+   
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581

Query: 549 FKTGDCDKALEI 560
            + GD   + E+
Sbjct: 582 LRDGDKAASAEL 593



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 233/447 (52%), Gaps = 24/447 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++++  +P++V ++ +++ + K  +FD  + + ++M+      + +TY   I+  C+   
Sbjct: 72  MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           +  A  V  +M++ G   D VT N++++GFC   +I +   L   M   G   +  ++N 
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG- 374
           LI GL  + +  EA+++ + +  K C  D  T+G+++NGLCK G ++ A+ +L ++E+G 
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251

Query: 375 ----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                               + DA +L   MD  G + N  T NSL+       +  +A 
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M  +  +P VV+++ LI+   K  +  EA     EM+++   PD+ TYS LING 
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C   ++D A  +    + K   P+V  YN LI G C A +V++ ++L+  M +R  V N 
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA---FEF 595
           VTY TL+ G F+  +CD A  ++  ++ + + PDI++Y+I L GLC+  ++  A   FE+
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L  +    + P   T++I++  +   G
Sbjct: 492 LQRS---KMEPDIYTYNIMIEGMCKAG 515



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 215/458 (46%), Gaps = 30/458 (6%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMP 89
           E GY      F+ ++  L           +++ + ++ C  P+ V    V+    K    
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ-PDLVTYGIVVNGLCKRGDI 237

Query: 90  DKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL + ++M +        I+      LC  +    A      +  KG++P+V +Y ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I  L   G    A  +  +M ER +  NVV ++ LID F K+G  + A+++++ ++ + S
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRS 356

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P++ TY+ +ING C   R DE   M++ M   +   +  TY + I G CKA  V+   
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            ++REM + G+  + VTY  +I GF +A +      +++ M   G L ++++Y+IL+ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
             NGKV+ A+ ++E L+      D  T+ ++I G+CK                   G++ 
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK------------------AGKVE 518

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           D   L   +   G K N  T  ++M+GF +    E A  LF+EM  +G  P   +YNTLI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
               +      +   ++EM    +  D  T  L+ N L
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 132/245 (53%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA +L   M K     +    + L++   + +K +  I L ++M   G S  + +Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LIN  C+  +   A + + +M++ G++PD++T + L+NG C   +I  A+ L  Q ++ 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+ PD   +N LIHGL    +  +A+ L   M  + C P+LVTY  +++GL K GD D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + + ++ P ++ YN  +  LC+   ++DA     +   +GI P  +T++ L+R 
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 618 VMNNG 622
           + N G
Sbjct: 301 LCNYG 305



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 65/143 (45%)

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+D A+ L    ++    P +  ++ L+  +    K +  + L   M+      NL TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L++   +      AL +   +++    PDI++ N  L G C  +R+SDA   +   +  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 603 GILPTTITWHILVRAVMNNGAST 625
           G  P + T++ L+  +  +  ++
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRAS 203


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 254/520 (48%), Gaps = 25/520 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR++   +    L  + ++ +    Y+YGTV+ G+  SGDL GA  +  EM   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI  F +   +  A  + + +  E  + P++  YN +I GL K  R DE      
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +N  + ++FTY +FI G  +A     A++  +EM E G+  + V    +I+ +C+  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E    +  M  +G L +  +Y +L+ GL +N KVD+A  I+  +R K    D  ++G
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLING  K G + KA  I +E+ E                   G   N    N L+ GF 
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVE------------------EGLTPNVIIYNMLLGGFC 673

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           ++ ++E A  L  EMS KG  P  V+Y T+I+G CK     EA+    EM  KG  PD  
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ L++G C+   ++ A+ +     +KG       +N LI+ +   GK E   ++ + +
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792

Query: 530 KK----RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
                 R   PN VTYN ++D L K G+ + A E+++ +    L P +I+Y   L G   
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             R ++ F   ++A+  GI P  I + +++ A +  G +T
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 260/562 (46%), Gaps = 57/562 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ E AK  L  +   G+  D ++Y  +I+GL+K  +   A  +  EM   G+   
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+  I    K+G   +AK +++ ++  + + P    Y  +I G C+     +  E+ 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MKK       +TY + + G+C +G+++GA  + +EM+ SG   + V Y  +I  F + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   + + M  +G   ++  YN LI GL +  ++DEA S    + E     ++ T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I+G  +      A + + E+ E G                 + ++ +A S    M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVD 585

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +A T   LMNG  +  K+++A  +F+EM  KG +P V SY  LING  K+    +
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S   EM+E+G  P++I Y++L+ G C+S +I+ A +L  +   KG  P+   Y  +I 
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG------------------------ 547
           G C +G + +A +L+  MK +  VP+   Y TL+DG                        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 548 ----------LFKTGDCDKALEIWNHILEERL----RPDIISYNITLKGLCSCSRMSDAF 593
                     +FK G  +   E+ N +++       +P+ ++YNI +  LC    +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 594 EFLNDALCRGILPTTITWHILV 615
           E  +      ++PT IT+  L+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLL 847



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 247/499 (49%), Gaps = 22/499 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +   S+  KGL P  Y+Y  +I+GL K   L  A ++  EM   GV  +   Y++LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 179 GFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           G  K  +   AK +   +V    ++ P +  Y+  I  + K G  ++   ++D M  +  
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
              +  Y S I G C+  NV     +  EM +  I +   TY  ++ G C +G +   + 
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           + + M   GC  NVV Y  LI+  L+N +  +A+ + + ++E+    D   +  LI GL 
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                    R+ +A S +  M ++G K NA+T  + ++G+I+AS+  +
Sbjct: 499 K------------------AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    KEM   G  P  V    LIN  CK E+  EA S  + M+++G   D  TY++L+N
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++ K+D A ++  +   KG  PDV  Y +LI+G    G ++ A  ++  M +    P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N++ YN L+ G  ++G+ +KA E+ + +  + L P+ ++Y   + G C    +++AF   
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 597 NDALCRGILPTTITWHILV 615
           ++   +G++P +  +  LV
Sbjct: 721 DEMKLKGLVPDSFVYTTLV 739



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 243/504 (48%), Gaps = 37/504 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKRFLNSLWE 128
           ++I+ + +NS    A+ V + M E  G    I C         + ++ ++A+ FL  + E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GLKP+ ++YG  I+G +++ +   A     EM E GV  N V    LI+ + KK   + 
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIE 575

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A   +  +V +  +  +  TY V++NGL K  + D+  E++  M+      D F+Y   I
Sbjct: 576 ACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +G  K GN++ A  ++ EMVE G+  + + YN ++ GFCR+G+I++  EL + M  KG  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V+Y  +I G  ++G + EA  +++ ++ K    DS  +  L++G C+   + +AI I
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNG------------------- 407
               ++G     A   +L+N + K G  +L     N LM+G                   
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   LE A  LF +M      PTV++Y +L+NG  K+ R  E +    E +  G +PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD-----VTMYNILIHGLCSAGKVEDA 522
            I YS++IN   +      AL L  Q   K    D     ++    L+ G    G++E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMD 546
            ++  NM +   +P+  T   L++
Sbjct: 935 EKVMENMVRLQYIPDSATVIELIN 958



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 231/522 (44%), Gaps = 74/522 (14%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME----------------- 199
           V+  M ER V  +V  Y++LI    + G+    K++  +   E                 
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267

Query: 200 ---TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                + P   TY+V+I+GLCK  R ++   +   M       D+ TY   I GL K  N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            + A+ +  EMV  GI +    Y+  I    + G +++   L++ M   G +    +Y  
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G      V +   +   ++++N      T+G ++ G+C +G L+ A  I+ E     
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE----- 442

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   GC+ N     +L+  F+Q S+  +A+ + KEM  +G +P +  
Sbjct: 443 -------------MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL---------------------- 473
           YN+LI GL K +R  EA SF+ EM+E G KP+  TY                        
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 474 -------------LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                        LIN  C+ +K+  A       + +G   D   Y +L++GL    KV+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA +++  M+ +   P++ +Y  L++G  K G+  KA  I++ ++EE L P++I YN+ L
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            G C    +  A E L++   +G+ P  +T+  ++     +G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 30/414 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +  +A     S+ ++G+  D  +Y  ++NGL K+  +  A  +F EM  +G+  +V
Sbjct: 568 CKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y +LI+GF K G+  +A  I++ +V E  + PNV+ YN+++ G C+ G  ++  E+ D
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       ++ TYC+ I G CK+G++  A R++ EM   G+  D+  Y  ++DG CR  
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCN----ADS 345
            ++    ++    +KGC +  + +N LI  + + GK +    +   L + + +     + 
Sbjct: 747 DVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ ++I+ LCK                  EG L  A  L ++M          T  SL+
Sbjct: 806 VTYNIMIDYLCK------------------EGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK--- 462
           NG+ +  +      +F E    G  P  + Y+ +IN   K     +A   V +M  K   
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 463 --GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             G K  + T   L++G  +  ++++A K+    ++  + PD      LI+  C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 56/275 (20%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G+I    +E A+F+F         P +     L++ L +  R    +   K M+E+ 
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 464 WKPDMITYSLLINGLCQSK---------------------KIDMALKLCCQFLQKGFTPD 502
              D+ TY +LI   C++                       +D ALKL    + KG  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD------- 555
              Y++LI GLC   ++EDA  L   M       +  TY+ L+DGL K  + D       
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 556 ----------------------------KALEIWNHILEERLRPDIISYNITLKGLCSCS 587
                                       KA  +++ ++   L P   +Y   ++G C   
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   +E L +   R I+ +  T+  +V+ + ++G
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 37/212 (17%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S+K     + S++ L   LC    F +A S V+ M+E+ W P    +S ++         
Sbjct: 89  SQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR-------- 139

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                 C Q    G + D  ++ IL  G  + G +E+A+ ++S+      VP L     L
Sbjct: 140 ------CSQEFV-GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVL 192

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS-------------- 590
           +D L +    D   +++  ++E  +  D+ +Y++ +   C    +               
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252

Query: 591 -------DAFEFLNDALCRGILPTTITWHILV 615
                   A +     +C+G++P   T+ +L+
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLI 284


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 175/556 (31%), Positives = 268/556 (48%), Gaps = 32/556 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE----------AGILCRKRQFEKAKRFLNSLW 127
           ++I+AY K    D A  V   M E  GC           AG LCR    E+A  F   + 
Sbjct: 249 TLIEAYCKVREFDTAKKVLVEMRE-RGCGLNTVTYNVLIAG-LCRSGAVEEAFGFKKDME 306

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + GL PD ++YG +INGL KS     A A+ DEM    ++ NVV Y  LIDGF ++G+  
Sbjct: 307 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 366

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ + +V    V PN +TY+ ++ GLCK G+ D    +  +M ++    D+ TY   
Sbjct: 367 EAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G  +  + + A R+  EM  +GI  +  TY+ MI G C++G+ ++  +L E M  KG 
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N   Y  LI G    G V  A  I++ + + N   D   +  LI GL K         
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK--------- 536

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR+ ++     +M + G   N +T + L++G+++   LE+A  L + M  
Sbjct: 537 ---------VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P  V Y  L+    K +   +  S  K ML++G   D   Y +LI+ L  S  ++ 
Sbjct: 588 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 647

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A ++     + G  PDV +Y+ LI GLC     E A  +   M K+   PN+V YN L+D
Sbjct: 648 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 707

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K+GD   A  ++N IL + L P+ ++Y   + G C    +S+AF   N+ L  GI P
Sbjct: 708 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767

Query: 607 TTITWHILVRAVMNNG 622
               + +L     + G
Sbjct: 768 DAFVYSVLTTGCSSAG 783



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 167/626 (26%), Positives = 294/626 (46%), Gaps = 48/626 (7%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQ------AYGKNSM 88
           A +P  F H+   L    L    + +L  I++ + Y    V L+ I        +   ++
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLL--IKMIRAYPSPPVVLASIHRALSDSGHRSPAV 176

Query: 89  PDKALDVFQRMNEIF-GCEAGILCRKRQFEKAKRFLNSL-------------WE------ 128
            D  +D +++   +    E  ++ R R    + R  N+L             W+      
Sbjct: 177 LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV 236

Query: 129 -KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
             G+ PDVY+Y T+I    K  +   A  V  EM ERG   N V YN+LI G  + G   
Sbjct: 237 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 296

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A   +++ + +  + P+  TY  +INGLCK  R +E   + D M   E + +   Y + 
Sbjct: 297 EAFG-FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G  + GN + A ++ +EMV +G+  + +TY+ ++ G C+ G++     L + M R   
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             + ++YN++I G   +    +A  +   +     + +  T+ ++I+GLC++G   KA  
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L E+   G                 EG ++ A  + ++M K     + Y  NSL+ G  
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++E +   F +M  +G  P   +Y+ LI+G  K      A   V+ ML+ G KP+ +
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 595

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+    +S  I+         L +G   D  +Y ILIH L S+G +E A ++ S +
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +K   VP++  Y++L+ GL KT D +KA  I + + ++ + P+I+ YN  + GLC    +
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 715

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
           S A    N  L +G++P  +T+  L+
Sbjct: 716 SYARNVFNSILAKGLVPNCVTYTSLI 741



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 228/451 (50%), Gaps = 21/451 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R    + A R L+ +   G+ P+VY+Y  +I+GL +SG+   A  + +EM  +G++ N  
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G+ ++G+   A EI++++  + +V P++  YN +I GL K GR +E  + + +
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++     + FTY   IHG  K G++E AE++ + M+++G+  + V Y  +++ + ++  
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I++    ++ M  +G  L+   Y ILI  L  +G ++ A  +   + +     D   +  
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK     KA  IL+E                  M K G   N    N+L++G  +
Sbjct: 670 LISGLCKTADREKAFGILDE------------------MSKKGVDPNIVCYNALIDGLCK 711

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  +  A  +F  +  KG  P  V+Y +LI+G CKV     A+    EML  G  PD   
Sbjct: 712 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 771

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+L  G   +  ++ A+ L  +   +G    ++ +N L+ G C  GK+++ L+L   + 
Sbjct: 772 YSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIM 830

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            R  VPN +T   ++ GL + G   +   I+
Sbjct: 831 GRGLVPNALTIENIISGLSEAGKLSEVHTIF 861



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 21/415 (5%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAERVYREMV 268
           +V+++   K GR  +  E+   M ++     S   C + +  L +A  +    +V   MV
Sbjct: 178 DVLVDTYKKSGRVQDAAEVV-LMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV 236

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
            +GI  D  TY+ +I+ +C+  +     ++   M  +GC LN V+YN+LI GL  +G V+
Sbjct: 237 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 296

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           EA    + + +     D  T+G LINGLCK+   N+A  +L+E                 
Sbjct: 297 EAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE----------------- 339

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M     K N     +L++GF++    + A  + KEM   G  P  ++Y+ L+ GLCK+ 
Sbjct: 340 -MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +   A   +K+M+    +PD ITY+L+I G  +      A +L  +    G +P+V  Y+
Sbjct: 399 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           I+IHGLC +G+ E A  L   M  +   PN   Y  L+ G  + G+   A EI++ + + 
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 518

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + PD+  YN  + GL    R+ ++ ++      RG+LP   T+  L+   + NG
Sbjct: 519 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 219/495 (44%), Gaps = 41/495 (8%)

Query: 70  YCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           YC E       + + K +  +   D++   + IFG     L +  + E++ ++   + E+
Sbjct: 499 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG-----LSKVGRVEESTKYFAQMQER 553

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P+ ++Y  +I+G +K+GDL  A  +   M + G++ N V Y  L++ +FK  D  + 
Sbjct: 554 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV 613

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              ++ ++ +  +  N + Y ++I+ L   G  +    +   ++KN    D   Y S I 
Sbjct: 614 SSTFKSMLDQGVMLDNRI-YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK  + E A  +  EM + G+  + V YNA+IDG C++G I     ++  +  KG + 
Sbjct: 673 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 732

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N V+Y  LI G  + G +  A  ++  +       D+  + VL  G    G L +A+ ++
Sbjct: 733 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 792

Query: 369 NEVEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            E+   G                 G++ +   L++ +   G   NA T  ++++G  +A 
Sbjct: 793 EEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 852

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTL------------------INGLCKVERFGEAYS 454
           KL     +F E+ +K        +++L                  I   CK     +A  
Sbjct: 853 KLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALM 912

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               ++ K       +Y  +++ LC+  K+  AL L  +  ++G  P      IL+  L 
Sbjct: 913 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLH 972

Query: 515 SAGKVEDALQLYSNM 529
           ++G +++   +  NM
Sbjct: 973 TSGYIQEHNTVLDNM 987



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 185/392 (47%), Gaps = 8/392 (2%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +    EK      S+ ++G+  D   YG +I+ L  SG++  A  V   + + G   +V 
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ LI G  K  D  +A  I + +  +  V PN+V YN +I+GLCK G       +++ 
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMS-KKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +       +  TY S I G CK G++  A  +Y EM+ +GI  DA  Y+ +  G   AG 
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +++   L E M  +G  ++ S+N L+ G  + GK+ E + +  ++  +    ++ T   +
Sbjct: 785 LEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 844

Query: 352 INGLCKNGYLNKAIQILNEVEE-GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           I+GL + G L++   I  E+++   E      +SL   M   G K+     + ++    +
Sbjct: 845 ISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCK 903

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD--- 467
              L+ A+ L   +  K       SY  +++ LC+  +  EA + +KEM ++G  P    
Sbjct: 904 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQ 963

Query: 468 --MITYSLLINGLCQSKKIDMALKLCCQFLQK 497
             ++  +L  +G  Q     +   LC ++LQK
Sbjct: 964 CLILLTNLHTSGYIQEHNTVLDNMLCHKWLQK 995



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 17/206 (8%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL---------------- 473
           +P   ++  L   LC    F  A   + +M+     P ++  S+                
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLD 178

Query: 474 -LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L++   +S ++  A ++      +G  P +   N L+  L  A  +    ++   M   
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++ TY+TL++   K  + D A ++   + E     + ++YN+ + GLC    + +A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 593 FEFLNDALCRGILPTTITWHILVRAV 618
           F F  D    G++P   T+  L+  +
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGL 324



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/183 (18%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI--------- 508
           ++      PD   ++ L   LC     ++A  L  + ++   +P V + +I         
Sbjct: 114 QLAPSAPAPD--AFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGH 171

Query: 509 --------LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                   L+     +G+V+DA ++   M+ R   P++   N L+  L +        ++
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              ++   + PD+ +Y+  ++  C       A + L +   RG    T+T+++L+  +  
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291

Query: 621 NGA 623
           +GA
Sbjct: 292 SGA 294


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/576 (27%), Positives = 282/576 (48%), Gaps = 31/576 (5%)

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQR------MNEIFGCEAGI--LCR 112
           E+IE+   + P + ALS +++   +      A D+  R      M  +F   A I  LC+
Sbjct: 321 EMIELG--FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK 378

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             +F++A+     + EKGL  +  +Y  +I+   + G L  A+    +M   G++  V  
Sbjct: 379 DGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP 438

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI+G  K G+   A   ++ ++ +  + P VV+Y  +I+G C  G+  E   ++  M
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMI-DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  +++T+ + I  L +A  +  A R++ EM+E  +  + VTYN MI+G C+ G  
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            + FEL   M +KG + +  +Y  LI  L   G+V EA    + L  ++   +   +  L
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ++G CK G L  A+ +  E+ + G                 E   +    L+  M     
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + +     S+++G+ +A  ++ A  ++  M  +GC+P +V+Y TLIN LCK     +A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             KEML     P+ +TY   ++ L +   ++ A++L    L KG   +   YNIL+ G C
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFC 796

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G+VE+A +L   M      P+ +TY+T++    + G+ D A+E W+ +L + L+PD +
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           +YN  + G C    +  AFE  +D + RG+ P   T
Sbjct: 857 AYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 271/524 (51%), Gaps = 20/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++FE     ++ + E G  P   +  +++ GL + G ++ A  + + + + G   +
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPS 365

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN LI+   K G +  A+ +++ +  E  +  N VTY+++I+  C+ G+ D  +   
Sbjct: 366 LFVYNALINSLCKDGKFDEAELLFKEM-GEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M     +   + Y S I+G CK GN+  A   + EM++ G+    V+Y ++I G+C  
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E F L+  M  KG   N  ++  LI  L    ++ +A  +++ + E+N   +  T+
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            V+I G CK G   KA ++LN++ + G                  GR+ +A   ++ + +
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
              KLN    ++L++G+ +  +L +A+ + +EM ++G    +V Y  LI+G  K +    
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            +  +K M ++  +PD + Y+ +I+G  ++  +  A  +    + +G TP++  Y  LI+
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC AG ++ A  L+  M   N  PN VTY   +D L + G  +KA+++ N +L+  L  
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLL-A 783

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + +SYNI ++G C   R+ +A + L++ +   I P  IT+  ++
Sbjct: 784 NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 170/601 (28%), Positives = 288/601 (47%), Gaps = 41/601 (6%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL  F+       + HS   F  ++  L++  L    S +L+ + ++    P +V     
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVF---- 143

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEAGILCR-----KRQFEKAKRFLNSLWEKGLKPDV 135
                    +  LD F++ + I      +L +     KR F+    F   + +  L P V
Sbjct: 144 ---------EALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIF-RLMRQCELMPQV 193

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            + G V+NGL K   +   L +F E+   G+  ++  Y  +I  F +  ++ +AKE+ +R
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQR 253

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             ME+S   NVV YNV+I+GLCK  R  E +E+ + + +        TYC+ + GLCK  
Sbjct: 254 --MESSDL-NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
             E    V  EM+E G        +++++G  R GK+ + F+L   + + G + ++  YN
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYN 370

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI  L ++GK DEA  +++ + EK   A+  T+ +LI+  C+ G L+ AI  L      
Sbjct: 371 ALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLG----- 425

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                        +M   G K+  Y  NSL+NG  +   L  A+  F EM  KG  PTVV
Sbjct: 426 -------------KMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVV 472

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SY +LI+G C   +  EA+    EM  KG  P+  T++ LI+ L ++ ++  A +L  + 
Sbjct: 473 SYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM 532

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L++   P+   YN++I G C  G    A +L + M ++  VP+  TY  L+  L  TG  
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRV 592

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A +  + +  E  + + + Y+  L G C   R+ DA     + + RG+    + + +L
Sbjct: 593 CEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVL 652

Query: 615 V 615
           +
Sbjct: 653 I 653



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 223/438 (50%), Gaps = 21/438 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C K +  +A R  + +  KG+ P+ Y++ T+I+ L ++  +  A  +FDEM E+ +  N 
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN++I+G  K+G+ ++A E+  ++V +  + P+  TY  +I+ LC  GR  E  +  D
Sbjct: 542 VTYNVMIEGHCKEGNTVKAFELLNQMV-QKGLVPDTYTYRPLISSLCSTGRVCEAKKFID 600

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            + +   + +   Y + +HG CK G +  A  V REMV+ G+ +D V Y  +IDG  +  
Sbjct: 601 DLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQ 660

Query: 291 KIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                F L + M  ++   + V Y  +I G  + G V +A  IW+++ ++ C  +  T+ 
Sbjct: 661 DTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYT 720

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LIN LCK G ++KA  +  E+             + N    H      Y C   ++   
Sbjct: 721 TLINELCKAGLMDKAELLWKEM------------LVSNSTPNH----VTYCC--FLDHLA 762

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   +E A+ L  +M  KG     VSYN L+ G CK+ R  EA   + EM++    PD I
Sbjct: 763 REGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TYS +I   C+   +D A++     L KG  PD   YN LI+G C AG++  A +L  +M
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881

Query: 530 KKRNCVPNLVTYNTLMDG 547
            +R   PN  T+ +L  G
Sbjct: 882 IRRGVKPNQATHKSLSHG 899



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 245/522 (46%), Gaps = 37/522 (7%)

Query: 119 AKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A RF N L   K       S+  +I+ LV +     A ++   +  RG       +  L+
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D F +K D++ +                 + ++++I    +  R  + + ++  M++ E 
Sbjct: 148 DCF-EKCDFISS-----------------LGFDLLIQSYVQEKRMFDSVLIFRLMRQCEL 189

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                T    ++GL K   V+    ++ E++  GI  D   Y A+I  FC      +  E
Sbjct: 190 MPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKE 249

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           + + M     LNVV YN+LI GL +N +V EA+ I   L +K   A   T+  L+ GLCK
Sbjct: 250 MIQRM-ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
                    +++E+ E G                 +G++ DA  LVNR+ K G   + + 
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+L+N   +  K + A  LFKEM  KG     V+Y+ LI+  C+  +   A  F+ +M+
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
             G K  +  Y+ LING C+   +  A+    + + KG  P V  Y  LI G C+ GK+ 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A +LY  M  +   PN  T+ TL+  LF+      A  +++ +LE+ + P+ ++YN+ +
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +G C       AFE LN  + +G++P T T+  L+ ++ + G
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 30/433 (6%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           H A  L+   T + G A + + F  ++  L     +    R+ + + +++   P +V  +
Sbjct: 488 HEAFRLYHEMTGK-GIAPNTYTFTTLISALFRANRMTDAFRLFDEM-LEQNMMPNEVTYN 545

Query: 79  V-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           V I+ + K     KA ++  +M +         +      LC   +  +AK+F++ L  +
Sbjct: 546 VMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
             K +   Y  +++G  K G L  AL V  EM +RGV+ ++VCY +LIDG  K+ D    
Sbjct: 606 HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAV 665

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + + +  +  + P+ V Y  MI+G  K G   +   +WD M       +  TY + I+
Sbjct: 666 FGLLKNM-HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            LCKAG ++ AE +++EM+ S    + VTY   +D   R G +++  +L   M +    N
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLAN 784

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            VSYNIL+RG  + G+V+EA  + + + +     D  T+  +I   C+ G L+ AI+  +
Sbjct: 785 TVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWD 844

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                         +++N+    G K +    N L+ G   A +L  A  L  +M R+G 
Sbjct: 845 --------------TMLNK----GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886

Query: 430 SPTVVSYNTLING 442
            P   ++ +L +G
Sbjct: 887 KPNQATHKSLSHG 899



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  Y K     KA  ++  M +  GC   I         LC+    +KA+     +  
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDE-GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLV 744

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
               P+  +Y   ++ L + G +  A+ + ++M  +G+  N V YNIL+ GF K G    
Sbjct: 745 SNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEE 803

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++ + ++ + +++P+ +TY+ +I   C+ G  D  +E WD M     + D+  Y   I
Sbjct: 804 ATKLLDEMI-DNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +G C AG +  A  +  +M+  G+  +  T+ ++  G  R   I
Sbjct: 863 YGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 235/465 (50%), Gaps = 20/465 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            F  A   L ++++ GL+P+  ++ T++NGL     ++ A+ +FDEM + G E +V+ Y+
Sbjct: 27  HFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYS 86

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            +I+G  K G    A ++ +++  E    PNVV Y+ +I+ LCK     E +E    M  
Sbjct: 87  TIINGLCKMGSTTMAIQLLKKME-EKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +  TY S +HG C  G    A  ++++MVE  +  D VT+N ++DG  + G I E
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              ++E M  KG   NV +YN L+ G     ++DEA  ++ ++  K C     ++ +LI 
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G CK+                  GR+ +A  L+  M       +  T ++LM GF Q  +
Sbjct: 266 GHCKS------------------GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            ++A  L +EM   G  P +++Y+ +++GLCK     EA+  +K M E   +P++  Y++
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI G+C   K++ A +L      KG  PDV  Y ++I GL   G   +A +L+ +M    
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           C+PN  TYN ++ G  + GD   A  +   ++      D  ++ +
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 229/423 (54%), Gaps = 19/423 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN VT++ ++NGL    +  + ++++D M K   E D  TY + I+GLCK G+   A ++
Sbjct: 45  PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL 104

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLE 322
            ++M E G   + V Y+ +ID  C+   I E  E L E++ R    NVV+Y+ ++ G   
Sbjct: 105 LKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+ +EA S+++ + E+N   D+ T  +L++GL K                  EG + +A
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK------------------EGMILEA 206

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +   M + G + N  T N+LM+G+   S+++ A  LF  M RKGC+P+V SYN LI G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            CK  R  EA   + EM  K   PD +TYS L+ G CQ  +   A KL  +    G  PD
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  Y+I++ GLC  G +++A +L   M++    PN+  Y  L+ G+   G  + A E+++
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++  + ++PD+++Y + + GL      ++A E   D    G LP + T++++++  + NG
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446

Query: 623 AST 625
            ++
Sbjct: 447 DTS 449



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 216/438 (49%), Gaps = 20/438 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L  K +   A +  + + + G +PDV +Y T+INGL K G    A+ +  +M E+G + N
Sbjct: 57  LSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPN 116

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +ID   K      A E    +V    + PNVVTY+ +++G C  GR +E   ++
Sbjct: 117 VVVYSTIIDSLCKDKLITEAMEFLSEMV-NRGISPNVVTYSSILHGFCNLGRSNEATSLF 175

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +     D+ T+   + GL K G +  A+ V+  M+E G+  +  TYNA++DG+C  
Sbjct: 176 KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQ 235

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  +L+ +M RKGC  +V SYNILI+G  ++G++DEA  +   +  K    D+ T+
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY 295

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G C+                  +GR  DA  L+  M  +G   +  T + +++G 
Sbjct: 296 STLMKGFCQ------------------DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A  L K M      P +  Y  LI G+C   +   A      +  KG +PD+
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+++I+GL +    + A +L       G  P+   YN++I G    G   +A +L   
Sbjct: 398 VTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457

Query: 529 MKKRNCVPNLVTYNTLMD 546
           M  R    +  T+  L D
Sbjct: 458 MVGRGFSADSSTFQMLSD 475



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 213/428 (49%), Gaps = 21/428 (4%)

Query: 200 TSVYPNVVTYNVMINGLCKCGR--FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +++ P+V T  ++IN  C      F     +   M K   + +  T+ + ++GL     +
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A +++ EMV+ G   D +TY+ +I+G C+ G      +L + M  KGC  NVV Y+ +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I  L ++  + EA+     +  +  + +  T+  +++G C                    
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN------------------L 165

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR  +A SL  +M +     +  T N L++G  +   +  A  +F+ M  KG  P V +Y
Sbjct: 166 GRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTY 225

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L++G C   +  EA      M+ KG  P + +Y++LI G C+S +ID A  L  +   
Sbjct: 226 NALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH 285

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           K  TPD   Y+ L+ G C  G+ +DA +L   M+    +P+L+TY+ ++DGL K G  D+
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDE 345

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E+   + E ++ P+I  Y I ++G+C+  ++  A E  ++   +GI P  +T+ +++ 
Sbjct: 346 AFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMIS 405

Query: 617 AVMNNGAS 624
            ++  G S
Sbjct: 406 GLLKGGLS 413


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/598 (27%), Positives = 287/598 (47%), Gaps = 68/598 (11%)

Query: 61  LELIE--IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------- 109
           LE+I+  ++  + P + A+S +++   K    ++AL++ +R+ E FG    I        
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAE-FGVSPNIFVYNALID 375

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC+ R F++A+   + + + GL P+  +Y  +I+   + G L  AL+   EM + G++ 
Sbjct: 376 SLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  YN LI+G  K GD   A+ +   ++    + P VVTY  ++ G C  G+ ++ L +
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMI-NKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M         +T+ + + GL +AG +  A +++ EM E  +  + VTYN MI+G+C 
Sbjct: 495 YHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + + FE    M  KG + +  SY  LI GL   G+  EA    + L + NC  +   
Sbjct: 555 EGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L++G C+                  EG+L +A S+   M   G  L+      L++G
Sbjct: 615 YTGLLHGFCR------------------EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            ++    +  + L KEM  +G  P  V Y ++I+   K   F EA+     M+ +G  P+
Sbjct: 657 SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQF--------------------------------- 494
            +TY+ +INGLC++  ++ A  LC +                                  
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELH 776

Query: 495 --LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
             + KG   +   YN+LI G C  G++E+A +L + M      P+ +TY T++  L +  
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRN 836

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           D  KA+E+WN + E+ +RPD ++YN  + G C    M  A E  N+ L +G+ P T T
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 267/525 (50%), Gaps = 21/525 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++FE     ++ +      P   +  +++ GL K G +  AL +   + E GV  N
Sbjct: 307 LCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPN 366

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN LID   K  ++  A+ +++R+  +  + PN VTY+++I+  C+ G+ D  L   
Sbjct: 367 IFVYNALIDSLCKGRNFDEAELLFDRM-GKIGLCPNDVTYSILIDMFCRRGKLDTALSFL 425

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     +   + Y S I+G CK G++  AE +  EM+   +    VTY +++ G+C  
Sbjct: 426 GEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GKI +   L+  M  KG + ++ ++  L+ GL   G + +A+ ++  + E N   +  T+
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            V+I G C+ G ++KA + LNE+ E G                  G+ ++A   V+ + K
Sbjct: 546 NVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             C+LN      L++GF +  KLE A+ + ++M  +G    +V Y  LI+G  K +    
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKV 665

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +KEM ++G KPD + Y+ +I+   ++     A  +    + +G  P+   Y  +I+
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK-TGDCDKALEIWNHILEERLR 570
           GLC AG V +A  L S M+  N VPN VTY   +D L K  GD  KA+E+ N IL+  L 
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG-LL 784

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +  +YN+ ++G C   RM +A E +   +  G+ P  IT+  ++
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/537 (30%), Positives = 256/537 (47%), Gaps = 31/537 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + R F  A    + +   G++PDVY Y  VI  L +  DL  A  +  +M   G + N
Sbjct: 202 LVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVN 261

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-----PNVVTYNVMINGLCKCGRFDE 224
           +V YN+LIDG  KK      +++WE + ++  +      P+VVTY  ++ GLCK   F+ 
Sbjct: 262 IVPYNVLIDGLCKK------QKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEV 315

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            LEM D M +           S + GL K G VE A  + + + E G+  +   YNA+ID
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALID 375

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C+     E   L++ MG+ G C N V+Y+ILI      GK+D A+S    + +     
Sbjct: 376 SLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------GG---EGRLADAASLV 386
               +  LING CK G ++ A  ++ E+                GG   +G++  A  L 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M   G   + YT  +L++G  +A  + +A+ LF EM+     P  V+YN +I G C+ 
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP-DVTM 505
               +A+ F+ EM+EKG  PD  +Y  LI+GLC + +   A K+    L KG    +   
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC 614

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  L+HG C  GK+E+AL +  +M  R    +LV Y  L+DG  K  D    L +   + 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  L+PD + Y   +          +AF   +  +  G +P  +T+  ++  +   G
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 245/544 (45%), Gaps = 96/544 (17%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEK 129
           ++I +  K    D+A  +F RM +I  C   +         CR+ + + A  FL  + + 
Sbjct: 372 ALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDM 431

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GLKP VY Y ++ING  K GD+  A ++  EM  + +E  VV Y  L+ G+  KG   +A
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491

Query: 190 KEIWERL----------------------------------VMETSVYPNVVTYNVMING 215
             ++  +                                  + E +V PN VTYNVMI G
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
            C+ G   +  E  + M +     D+++Y   IHGLC  G    A+     + +    ++
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN----------- 323
            + Y  ++ GFCR GK++E   + + MG +G  L++V Y +LI G L++           
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671

Query: 324 ------------------------GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
                                   G   EA  IW+L+  + C  +  T+  +INGLCK G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           ++N+A  + +++  G         S+ N++  +GC L+  T    +    +A +L NAI 
Sbjct: 732 FVNEAEILCSKMRPGN--------SVPNQV-TYGCFLDILTKG--VGDMKKAVELHNAIL 780

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
                  KG      +YN LI G C+  R  EA   +  M+  G  PD ITY+ +I+ LC
Sbjct: 781 -------KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +   +  A++L     +KG  PD   YN LIHG C AG++  A +L + M ++   PN  
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893

Query: 540 TYNT 543
           T  T
Sbjct: 894 TSET 897



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 206/401 (51%), Gaps = 18/401 (4%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T  + +HGL K  +   A  ++ +M+  GI  D   Y  +I   C    +    E+   M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC +N+V YN+LI GL +  KV EA+ I + L  K    D  T+  L+ GLCK    
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313

Query: 362 NKAIQILNE---------------VEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
              +++++E               + EG    G++ +A +LV R+ + G   N +  N+L
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++   +    + A  LF  M + G  P  V+Y+ LI+  C+  +   A SF+ EM++ G 
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           KP +  Y+ LING C+   I  A  L  + + K   P V  Y  L+ G CS GK+  AL+
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           LY  M  +  VP++ T+ TL+ GLF+ G    A++++  + E  ++P+ ++YN+ ++G C
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYC 553

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
               MS AFEFLN+ + +GI+P T ++  L+  +   G ++
Sbjct: 554 EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 259/526 (49%), Gaps = 51/526 (9%)

Query: 121 RFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALA--------------VFDEMF--- 162
           RF N L   +G      S+  +I+ LV++     A +              VFD +F   
Sbjct: 89  RFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCY 148

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+   ++   +++LI  + +    +    +++ ++ + S+ P V T + +++GL K   F
Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHF 208

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              +E++D M       D + Y   I  LC+  ++  A+ +  +M  +G  V+ V YN +
Sbjct: 209 GLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVL 268

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-------NVVSYNILIRGLLENGKVDEAIS-IWE 334
           IDG C+  K+      WE +G K  L       +VV+Y  L+ GL +  + +  +  I E
Sbjct: 269 IDGLCKKQKV------WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDE 322

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGR 378
           +LR +   +++     L+ GL K G + +A+ ++  V E G                +GR
Sbjct: 323 MLRLRFSPSEAAVSS-LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 379 LADAASLV-NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
             D A L+ +RM K G   N  T + L++ F +  KL+ A+    EM   G  P+V  YN
Sbjct: 382 NFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYN 441

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           +LING CK      A S + EM+ K  +P ++TY+ L+ G C   KI+ AL+L  +   K
Sbjct: 442 SLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P +  +  L+ GL  AG + DA++L++ M + N  PN VTYN +++G  + G+  KA
Sbjct: 502 GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKA 561

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            E  N ++E+ + PD  SY   + GLC   + S+A  F+ D L +G
Sbjct: 562 FEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV-DGLHKG 606



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 207/428 (48%), Gaps = 54/428 (12%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C K +  KA R  + +  KG+ P +Y++ T+++GL ++G +  A+ +F EM E  V+
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V YN++I+G+ ++G+  +A E    ++ E  + P+  +Y  +I+GLC  G+  E   
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMI-EKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV------------------------ 263
             D + K   E +   Y   +HG C+ G +E A  V                        
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658

Query: 264 -----------YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
                       +EM + G+  D V Y +MID   + G  KE F +W++M  +GC+ N V
Sbjct: 659 KHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN-GYLNKAIQILNE 370
           +Y  +I GL + G V+EA  +   +R  N   +  T+G  ++ L K  G + KA+++ N 
Sbjct: 719 TYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNA 778

Query: 371 VEEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           + +G                 +GR+ +A+ L+ RM   G   +  T  ++++   + + +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + AI L+  M+ KG  P  V+YNTLI+G C     G+A     EML +G KP+  T    
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETT 898

Query: 475 INGLCQSK 482
           I+    SK
Sbjct: 899 ISNDSSSK 906


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 250/484 (51%), Gaps = 20/484 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V  +  + + + K+      LA+  +M  +G+  ++   +I+I+ F +      A   
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +M+    P+ V +N ++NGLC   R  E LE+ DRM +   +    T  + ++GLC
Sbjct: 146 MGK-IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
             G V  A  +   MVE+G   + VTY  +++  C++G+     EL   M  +   L+ V
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+I+I GL ++G +D A +++  +  K   AD  T+  LI G C               
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC--------------- 309

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR  D A L+  M K     N  T + L++ F++  KL  A  L KEM ++G +P
Sbjct: 310 ---NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             ++YN+LI+G CK  R  EA   V  M+ KG  PD++T+++LING C++ +ID  L+L 
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   +   YN L+ G C +GK+E A +L+  M  R   P++V+Y  L+DGL   
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ +KALEI+  I + ++  DI  Y I + G+C+ S++ DA++       +G+      +
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546

Query: 612 HILV 615
           +I++
Sbjct: 547 NIMI 550



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 273/514 (53%), Gaps = 21/514 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR R+   A   +  + + G +PD   + T++NGL     +  AL + D M E G +  
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++  N L++G    G    A  + +R+V ET   PN VTY  ++N +CK G+    +E+ 
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D+  Y   I GLCK G+++ A  ++ EM   G   D +TYN +I GFC A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +  +L  +++ RK   NVV++++LI   ++ GK+ EA  + + + ++    ++ T+
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK                  E RL +A  +V+ M   GC  +  T N L+NG+
Sbjct: 372 NSLIDGFCK------------------ENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A+++++ + LF+EMS +G     V+YNTL+ G C+  +   A    +EM+ +  +PD+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ++Y +L++GLC + +++ AL++  +  +     D+ +Y I+IHG+C+A KV+DA  L+ +
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +  +    +   YN ++  L +     KA  ++  + EE   PD ++YNI ++       
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + A E + +    G  P  ++   +V  ++++G
Sbjct: 594 ATTAAELIEEMKSSG-FPADVSTVKMVINMLSSG 626



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 272/549 (49%), Gaps = 36/549 (6%)

Query: 90  DKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           D A+D+F+ M            N +F      + + +Q+E        +  KG+   +Y+
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSA----IAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
              +IN   +   L  A +   ++ + G E + V +N L++G   +     A E+ +R+V
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            E    P ++T N ++NGLC  G+  + + + DRM +   + +  TY   ++ +CK+G  
Sbjct: 186 -EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A  + R+M E  I +DAV Y+ +IDG C+ G +   F L+  M  KG   ++++YN L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I G    G+ D+   +   + ++  + +  T  VLI+   K G L +A Q+L E      
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE------ 358

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M + G   N  T NSL++GF + ++LE AI +   M  KGC P ++++
Sbjct: 359 ------------MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LING CK  R  +     +EM  +G   + +TY+ L+ G CQS K+++A KL  + + 
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +   PD+  Y IL+ GLC  G++E AL+++  ++K     ++  Y  ++ G+      D 
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A +++  +  + ++ D  +YNI +  LC    +S A          G  P  +T++IL+R
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586

Query: 617 AVMNNGAST 625
           A + +  +T
Sbjct: 587 AHLGDDDAT 595



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 253/510 (49%), Gaps = 34/510 (6%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMP 89
           GY     +F+ +L  L    L   VS  LEL++  ++  + P  + L +++     N   
Sbjct: 153 GYEPDTVIFNTLLNGLC---LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209

Query: 90  DKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
             A+ +  RM       NE+ +G    ++C+  Q   A   L  + E+ +K D   Y  +
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+GL K G L  A  +F+EM  +G + +++ YN LI GF   G +    ++  R +++  
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL-RDMIKRK 328

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PNVVT++V+I+   K G+  E  ++   M +     ++ TY S I G CK   +E A 
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           ++   M+  G   D +T+N +I+G+C+A +I +  EL+  M  +G + N V+YN L++G 
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++GK++ A  +++ +  +    D  ++ +L++GLC NG L KA++I  ++E        
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE-------- 500

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                     K   +L+      +++G   ASK+++A  LF  +  KG      +YN +I
Sbjct: 501 ----------KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           + LC+ +   +A    ++M E+G  PD +TY++LI           A +L  +    GF 
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            DV+   ++I+ L S    +  L + S  +
Sbjct: 611 ADVSTVKMVINMLSSGELDKSFLDMLSTTR 640



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 112/211 (53%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K ++A+ LF++M +    PTV+ +N L + + K +++    +  K+M  KG    + T S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C+ +K+  A     + ++ G+ PD  ++N L++GLC   +V +AL+L   M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P L+T NTL++GL   G    A+ + + ++E   +P+ ++Y   L  +C   + + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E L     R I    + + I++  +  +G+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 262/547 (47%), Gaps = 56/547 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  Q E A+R   ++    + P+ Y+Y  V+  L   G +  ALAV DEM  RG     
Sbjct: 101 CRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP 157

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL---------------------------------- 196
             Y+++++   + G +  A  + E L                                  
Sbjct: 158 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 217

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      P+VV+YN ++ GLC   R+    E+ + M +     +  T+ + I  LC+ G 
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E    V  +MVE G   D   Y  +IDG C+ G ++   E+   M   G   NVV YN 
Sbjct: 278 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 337

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L++GL    + +E   +   + +K+C  D  T  +L++  C+NG +++ I++L +     
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ----- 392

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M + GC  +  T  +++NGF +   ++ A+ L K M+  GC P  +S
Sbjct: 393 -------------MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  ++ GLC  ER+ +A   + +M+++G   + IT++ LIN LC+   ++ A++L  Q L
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G +PD+  Y+ +I GL  AGK ++AL+L + M  +   PN + Y+++   L + G  +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           K ++++++I +  +R D + YN  +  LC       A EFL   +  G +P   T+ IL+
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619

Query: 616 RAVMNNG 622
           R + + G
Sbjct: 620 RGLASEG 626



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 254/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  A R L  L  +G   DV +   V+N +   G +  AL +  ++   G E +V
Sbjct: 168 CRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDV 227

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ E +V   +  PN+VT+N +I+ LC+ G F+   E+  
Sbjct: 228 VSYNAVLKGLCMAKRWGCVQELMEEMV-RMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 287 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E  EL   M  K C L+ V++NIL+    +NG VD  I + E + E+ C  D  T+ 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYT 406

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 407 TVINGFCKEGLIDEAVMLLKS------------------MTACGCKPNTISYTIVLKGLC 448

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC    +++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K D AL+L    + KG +P+  +Y+ +   L   G++   +Q++ N+
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +      + V YN ++  L K G+ ++A+E   +++     P+  +Y I ++GL S   +
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L +   +G L   +  H
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKH 651



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 210/467 (44%), Gaps = 56/467 (11%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN M+ G C+ G+ +    +   +       +++TY   +  LC  G +  A  V  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPV---PPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             G       Y+ +++  CR G  +    + E +  +GC L+V + N+++  + + G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 328 EAISIWELLREKNCNADSTTHGVLING--------------------------------- 354
           EA+ +   L    C  D  ++  ++ G                                 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 355 --LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
             LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  +G K
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    N+L+ G   A + E    L  EM  K C    V++N L++  C+          
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           +++MLE+G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ GLCS
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           A +  DA  L S M ++ C  N +T+NTL++ L K G  ++A+E+   +L     PD+IS
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y+  + GL    +  +A E LN  + +G+ P TI +  +  A+   G
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E  S    S I  LC AG    A R              V YNAM+ G+CRAG+++    
Sbjct: 55  EGGSVRLSSLIRSLCAAGRTAEAARALSAAGGG---AGVVAYNAMVAGYCRAGQLESARR 111

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           L   +      N  +Y  ++R L   G++ +A+++ + +  + C      + V++   C+
Sbjct: 112 LAAAVPVPP--NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 169

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
            G    A+++L ++   G                 +G + +A  L+  +   GC+ +  +
Sbjct: 170 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 229

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+++ G   A +      L +EM R  C P +V++NTLI+ LC+   F   +  + +M+
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 289

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G  PD+  Y+ +I+G+C+   +++A ++  +    G  P+V  YN L+ GLCSA + E
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 349

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +  +L + M  ++C  + VT+N L+D   + G  D+ +E+   +LE    PD+I+Y   +
Sbjct: 350 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVI 409

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            G C    + +A   L      G  P TI++ I+++ +
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 134/270 (49%), Gaps = 2/270 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    ++    L  + E+G  PDV +Y TVING  K G +  A+ +   M   G + N
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y I++ G      ++ A+++  +++ +     N +T+N +IN LCK G  ++ +E+ 
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFNTLINFLCKKGLVEQAIELL 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  N    D  +Y + I GL KAG  + A  +   MV  G+  + + Y+++     R 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I +  ++++ +       + V YN +I  L + G+ + AI     +    C  + +T+
Sbjct: 556 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            +LI GL   G++ +A ++L E+   G  R
Sbjct: 616 TILIRGLASEGFVKEAQEMLTELCSKGALR 645



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 3/118 (2%)

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN ++ G C AG++E A +L + +      PN  TY  ++  L   G    AL + + + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
                P    Y++ L+  C       A   L D   RG        ++++ A+ + G+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 287/559 (51%), Gaps = 30/559 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGILCRKR--QFEKAKRF 122
           P+DV   S+I    K    D+A+++F+ ++       ++     I+      +F +A   
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L     KG  P V +Y  ++  L + G +  AL + + M +     N+  YNILID   K
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCK 423

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+   A ++ + +  E  ++PN++T N+MI+ LCK  R DE   ++  +       DS 
Sbjct: 424 AGELEAALKVQDSM-KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+CS I GL + G V  A  +Y +M++SG   +AV Y ++I  F + G+ ++  ++++ M
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +GC  +++  N  +  + + G++++  +++E ++ +    D  ++ +LI+GL K G+ 
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
               ++  E++E                   G  L+    N +++GF ++ K+  A  L 
Sbjct: 603 KDTYKLFYEMKE------------------QGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +EM  KG  PTVV+Y ++I+GL K++R  EAY   +E   K    +++ YS LI+G  + 
Sbjct: 645 EEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +ID A  +  + +QKG TP+   +N L+  L  A ++++AL  + NMK   C PN VTY
Sbjct: 705 GRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTY 764

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           + +++GL K    +KA   W  + ++ L+P+ I+Y   + GL     + +A +       
Sbjct: 765 SIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKS 824

Query: 602 RGILPTTITWHILVRAVMN 620
            G +P +  ++ ++  + N
Sbjct: 825 SGGIPDSACYNAMIEGLSN 843



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 296/637 (46%), Gaps = 26/637 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +++  K+   AL  F    R+    HSP  ++ +L  +   + + ++ +ILE + + 
Sbjct: 102 VVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMA 161

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
                 +  + ++ ++ K+    +A  V + M +         +    G L    + +  
Sbjct: 162 GFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPM 221

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
              L  + E G +  V+ + T+I    + G +  AL++ DEM       ++V YN+ ID 
Sbjct: 222 LTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDC 281

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G    A + +  L  +  V P+ VT+  MI  LCK  R DE +E+++ +  N+   
Sbjct: 282 FGKVGKVDMAWKFFHELKSQGLV-PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVP 340

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
             + Y + I G    G    A  +       G     + YN ++    R GK++E   + 
Sbjct: 341 CVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL 400

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           E M      N+ SYNILI  L + G+++ A+ + + ++E     +  T  ++I+ LCK  
Sbjct: 401 EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            L++A  I   ++                  G  G++ DA  L  +M   G   NA    
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+  F +  + E+   ++KEM  +GCSP ++  N  ++ + K     +  +  +E+  +
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD+ +YS+LI+GL +        KL  +  ++G   D   YNI+I G C +GKV  A
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            QL   MK +   P +VTY +++DGL K    D+A  ++     + +  +++ Y+  + G
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                R+ +A+  L + + +G+ P T TW+ L+ A++
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALV 737



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 236/459 (51%), Gaps = 21/459 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A      L  K   PD  ++ ++I+GL + G +  A  ++++M + G   N
Sbjct: 456 LCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPN 515

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI  FFK G      +I++ + M     P+++  N  ++ + K G  ++   ++
Sbjct: 516 AVVYTSLIRNFFKCGRKEDGHKIYKEM-MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF 574

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + +K      D  +Y   IHGL K G  +   +++ EM E G+ +D   YN +IDGFC++
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS 634

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ + ++L E M  KG    VV+Y  +I GL +  ++DEA  ++E  + K  + +   +
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVY 694

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  K G +++A  IL E+ +                   G   N YT N L++  
Sbjct: 695 SSLIDGFGKVGRIDEAYLILEELMQ------------------KGLTPNTYTWNCLLDAL 736

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A +++ A+  F+ M    C P  V+Y+ ++NGLCKV +F +A+ F +EM ++G KP+ 
Sbjct: 737 VKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNT 796

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ +I+GL +   +  A  L  +F   G  PD   YN +I GL +A K  DA  L+  
Sbjct: 797 ITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            + + C     T   L+D L K  DC +   I   +L E
Sbjct: 857 TRLKGCRIYSKTCVVLLDALHK-ADCLEQAAIVGAVLRE 894



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/578 (23%), Positives = 235/578 (40%), Gaps = 80/578 (13%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV------------ 171
           N+L  +G++  V+    V++       L  AL  FDEM +  +   V+            
Sbjct: 59  NALKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHY 118

Query: 172 ---------------CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
                           YN L+    +  +    ++I E + M     P+  T   M+   
Sbjct: 119 FRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSM-AGFGPSNNTCIEMVASF 177

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            K  +  E   + + M+K +       Y + I  L  A   +    + R+M E G  V  
Sbjct: 178 VKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTV 237

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
             +  +I  F R G++     L + M       ++V YN+ I    + GKVD A   +  
Sbjct: 238 HLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHE 297

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGR 378
           L+ +    D  T   +I  LCK   +++A+++  E++                  G  G+
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 379 LADAASLVNRMDKHGC--KLNAYTC--------------------------------NSL 404
             +A SL+ R  + GC   + AY C                                N L
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNIL 417

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++   +A +LE A+ +   M   G  P +++ N +I+ LCK +R  EA S    +  K  
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD +T+  LI+GL +  K++ A  L  + L  G TP+  +Y  LI      G+ ED  +
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           +Y  M  R C P+L+  N  MD +FK G+ +K   ++  I  + L PD+ SY+I + GL 
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 D ++   +   +G+   T  ++I++     +G
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSG 635


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 171/659 (25%), Positives = 310/659 (47%), Gaps = 69/659 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+    A  +    L LF    +E GY  + HLF  ++R       V     +L+  E++
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQ-MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD--EMK 230

Query: 68  KCYCPEDVALS--VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKR--- 114
                 D+ L    I ++GK    D A   F  +           +    G+LC+     
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290

Query: 115 --------------------------------QFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
                                           +F++A   L     KG  P V +Y  ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
             L K G +  AL VF+EM ++    N+  YNILID   + G    A E+ + +  +  +
Sbjct: 351 TCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGL 408

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PNV T N+M++ LCK  + DE   M++ M       D  T+CS I GL K G V+ A +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           VY +M++S    +++ Y ++I  F   G+ ++  ++++ M  + C  ++   N  +  + 
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G+ ++  +++E ++ +    D+ ++ +LI+GL K G+ N+  ++   ++E        
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE-------- 580

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC L+    N +++GF +  K+  A  L +EM  KG  PTVV+Y ++I+
Sbjct: 581 ----------QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL K++R  EAY   +E   K  + +++ YS LI+G  +  +ID A  +  + +QKG TP
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  +N L+  L  A ++ +AL  + +MK+  C PN VTY  L++GL K    +KA   W
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             + ++ ++P  ISY   + GL     +++A    +     G +P +  ++ ++  + N
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 271/589 (46%), Gaps = 90/589 (15%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + E G +P V+ + T+I G  K G +  AL++ DEM    ++ ++V YN+ ID F 
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G    A + +   +    + P+ VTY  MI  LCK  R DE +EM++ ++KN R   +
Sbjct: 250 KVGKVDMAWKFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308

Query: 242 FTYCSFIHG-----------------------------------LCKAGNVEGAERVYRE 266
           + Y + I G                                   L K G V+ A +V+ E
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           M +     +  TYN +ID  CRAGK+   FEL + M + G   NV + NI++  L ++ K
Sbjct: 369 MKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG----------- 374
           +DEA +++E +  K C  D  T   LI+GL K G ++ A ++  ++ +            
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487

Query: 375 ------GEGRLADAASLVNRMDKHGCK-----LNAY------------------------ 399
                   GR  D   +   M    C      LN Y                        
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547

Query: 400 ------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                 + + L++G I+A        LF  M  +GC     +YN +I+G CK  +  +AY
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             ++EM  KG++P ++TY  +I+GL +  ++D A  L  +   K    +V +Y+ LI G 
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              G++++A  +   + ++   PNL T+N+L+D L K  + ++AL  +  + E +  P+ 
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++Y I + GLC   + + AF F  +   +G+ P+TI++  ++  +   G
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 232/459 (50%), Gaps = 21/459 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A      +  K   PD  ++ ++I+GL K G +  A  V+++M +    TN
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y  LI  FF  G      +I++ ++ + +  P++   N  ++ + K G  ++   M+
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + +K      D+ +Y   IHGL KAG       ++  M E G  +D   YN +IDGFC+ 
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ + ++L E M  KG    VV+Y  +I GL +  ++DEA  ++E  + K    +   +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  K G +++A  IL E+ +                   G   N YT NSL++  
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQ------------------KGLTPNLYTWNSLLDAL 702

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A ++  A+  F+ M    C+P  V+Y  LINGLCKV +F +A+ F +EM ++G KP  
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL ++  I  A  L  +F   G  PD   YN +I GL +  +  DA  L+  
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            ++R    +  T   L+D L K  DC +   I   +L E
Sbjct: 823 TRRRGLPIHNKTCVVLLDTLHKN-DCLEQAAIVGAVLRE 860



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 264/558 (47%), Gaps = 62/558 (11%)

Query: 96  FQRMNEIFGCEAG------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           ++R  E+  C         ++ R R F+   + L  +   G  P V +   ++ G VK+ 
Sbjct: 88  YERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKAN 147

Query: 150 D-------------------------LLGA----------LAVFDEMFERGVETNVVCYN 174
                                     L+GA          L +F +M E G E  V  + 
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI GF K+G    A  + + +   +S+  ++V YNV I+   K G+ D   + +  ++ 
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           N  + D  TY S I  LCKA  ++ A  ++  + ++        YN MI G+  AGK  E
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            + L E    KG + +V++YN ++  L + GKVDEA+ ++E ++ K+   + +T+ +LI+
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILID 385

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            LC+ G L+ A +                  L + M K G   N  T N +++   ++ K
Sbjct: 386 MLCRAGKLDTAFE------------------LRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L+ A  +F+EM  K C+P  +++ +LI+GL KV R  +AY   ++ML+   + + I Y+ 
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI       + +   K+    + +  +PD+ + N  +  +  AG+ E    ++  +K R 
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
            VP+  +Y+ L+ GL K G  ++  E++  + E+    D  +YNI + G C C +++ A+
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607

Query: 594 EFLNDALCRGILPTTITW 611
           + L +   +G  PT +T+
Sbjct: 608 QLLEEMKTKGFEPTVVTY 625



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 59/354 (16%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           ++R L +  +  E    +E   E     +S    +L+   C+N   +   QIL E+   G
Sbjct: 71  VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN--FDALDQILGEMSVAG 128

Query: 376 EG-----------------RLADAASLVNRMDKHGCK--LNAYTCNSLMNGFIQASKLEN 416
            G                 +L +   +V  M K   +   +AYT  +L+  F   +  + 
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT--TLIGAFSAVNHSDM 186

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
            + LF++M   G  PTV  + TLI G  K  R   A S + EM       D++ Y++ I+
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK----- 531
              +  K+DMA K   +    G  PD   Y  +I  LC A ++++A++++ +++K     
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306

Query: 532 ------------------------------RNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
                                         +  +P+++ YN ++  L K G  D+AL+++
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              +++   P++ +YNI +  LC   ++  AFE  +     G+ P   T +I+V
Sbjct: 367 EE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 111/239 (46%)

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            ++  M   G   +  TC  ++ G ++A+KL     + + M +    P   +Y TLI   
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
             V       +  ++M E G++P +  ++ LI G  +  ++D AL L  +        D+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN+ I      GKV+ A + +  ++     P+ VTY +++  L K    D+A+E++ H
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + R  P   +YN  + G  S  +  +A+  L     +G +P+ I ++ ++  +   G
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 254/494 (51%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+Y  ++N   +   L  ALAV  +M + G E ++V  + L++G+        A
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++V E    P+ VT+N +I+GL    +  E + + DRM     + D FTY + ++
Sbjct: 171 VALVDQMV-EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLCK G+++ A  + ++M +  I  + V YN +IDG C+   + + F+L+  M  KG   
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +YN LI  L   G+  +A  +   + E+  N +  T   LI+   K           
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK----------- 338

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  EG+L +A  L + M +     N  T NSL+NGF    +L+ A  +F  M  K 
Sbjct: 339 -------EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI GL Q+   DMA 
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           K+  + +  G  PD+  Y+IL+ GLC  GK+E AL ++  ++K    PN+ TYN +++G+
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  +   +++  +  + ++P++I Y   + G C      +A     +    G LP +
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571

Query: 609 ITWHILVRAVMNNG 622
             ++ L+RA + +G
Sbjct: 572 GCYNTLIRARLRDG 585



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 252/475 (53%), Gaps = 22/475 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G +PD+ +  +++NG      +  A+A+ D+M E G + +
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N LI G F       A  + +R+V      P++ TY  ++NGLCK G  D  L + 
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M+K + E +   Y + I GLCK  +++ A  ++ +M   GI  D  TYN++I   C  
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +   L  +++ RK   NVV++N LI    + GK+ EA  +++ + +++ + +  T+
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C +  L++A QI                     M    C  +  T N+L+ GF
Sbjct: 365 NSLINGFCMHDRLDEAQQIF------------------TLMVSKDCLPDVVTYNTLIKGF 406

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A ++E  + LF+EMS++G     V+YNTLI GL +      A    K+M+  G  PD+
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ITYS+L++GLC+  K++ AL +  ++LQK    P++  YNI+I G+C AGKVED   L+ 
Sbjct: 467 ITYSILLDGLCKYGKLEKAL-VVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++  +   PN++ Y T++ G  + G  ++A  ++  + E+   PD   YN  ++ 
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 238/451 (52%), Gaps = 20/451 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++  +A   ++ + E G KPD  ++ T+I+GL        A+A+ D M  RG + ++
Sbjct: 162 CHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  +++G  K+GD   A  + +++  +  +  NVV YN +I+GLCK    D+  ++++
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN 280

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+    + D FTY S I  LC  G    A R+  +M+E  I  + VT+N++ID F + G
Sbjct: 281 KMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG 340

Query: 291 KIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E  +L+ E++ R    N+V+YN LI G   + ++DEA  I+ L+  K+C  D  T+ 
Sbjct: 341 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 400

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI G CK             VEEG E        L   M + G   N  T N+L+ G  
Sbjct: 401 TLIKGFCKA----------KRVEEGME--------LFREMSQRGLVGNTVTYNTLIQGLF 442

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           QA   + A  +FK+M   G  P +++Y+ L++GLCK  +  +A    + + +   +P++ 
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I G+C++ K++    L C    KG  P+V +Y  +I G C  G  E+A  L+  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 562

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           K+   +P+   YNTL+    + GD   + E+
Sbjct: 563 KEDGTLPDSGCYNTLIRARLRDGDKAASAEL 593



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 247/487 (50%), Gaps = 19/487 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F EM +     +++ ++ L+    K   +     + E++     +  N  TY++++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILL 123

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+  +    L +  +M K   E D  T  S ++G C    +  A  +  +MVE G  
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYK 183

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VT+N +I G     K  E   L + M  +GC  ++ +Y  ++ GL + G +D A+S+
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
            + + +    A+   +  +I+GLCK  +++ A  + N++E  G                 
Sbjct: 244 LKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCN 303

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            GR +DA+ L++ M +     N  T NSL++ F +  KL  A  LF EM ++   P +V+
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 363

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN+LING C  +R  EA      M+ K   PD++TY+ LI G C++K+++  ++L  +  
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           Q+G   +   YN LI GL  AG  + A +++  M      P+++TY+ L+DGL K G  +
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 483

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL ++ ++ + ++ P+I +YNI ++G+C   ++ D ++       +G+ P  I +  ++
Sbjct: 484 KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543

Query: 616 RAVMNNG 622
                 G
Sbjct: 544 SGFCRKG 550



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 226/465 (48%), Gaps = 60/465 (12%)

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           NGL +  + D+ + ++  M K+        +   +  + K    +    +  +M   GI 
Sbjct: 55  NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 274 VDAVTYNAMI-----------------------------------DGFCRAGKIKECFEL 298
            +  TY+ ++                                   +G+C   +I E   L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   G   + V++N LI GL  + K  EA+++ + +  + C  D  T+G ++NGLCK
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 358 NGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNAYT 400
            G ++ A+ +L ++E+G             +G      + DA  L N+M+  G K + +T
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            NSL++      +  +A  L  +M  +  +P VV++N+LI+   K  +  EA     EM+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++   P+++TY+ LING C   ++D A ++    + K   PDV  YN LI G C A +VE
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           + ++L+  M +R  V N VTYNTL+ GLF+ GDCD A +I+  ++ + + PDII+Y+I L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473

Query: 581 KGLCSCSRMSDA---FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC   ++  A   FE+L  +    + P   T++I++  +   G
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKS---KMEPNIYTYNIMIEGMCKAG 515



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 214/431 (49%), Gaps = 53/431 (12%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   ++ +  +G +PD+++YGTV+NGL K GD+  AL++  +M +  +E NVV YN +I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 178 DGFFKKGDYMRAKEIWERL----------------------------------VMETSVY 203
           DG  K      A +++ ++                                  ++E  + 
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNVVT+N +I+   K G+  E  +++D M +   + +  TY S I+G C    ++ A+++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           +  MV      D VTYN +I GFC+A +++E  EL+  M ++G + N V+YN LI+GL +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G  D A  I++ +       D  T+ +L++GLCK G L KA+ +   ++          
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ---------- 493

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                   K   + N YT N ++ G  +A K+E+   LF  +S KG  P V+ Y T+I+G
Sbjct: 494 --------KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 545

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+     EA +  +EM E G  PD   Y+ LI    +      + +L  +    GF  D
Sbjct: 546 FCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 605

Query: 503 VTMYNILIHGL 513
            +  +++I+ L
Sbjct: 606 ASTISMVINML 616



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 16/328 (4%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL ++++ + NP+  T  +L D+  +E     +  LF  +++R IDP +V + S I 
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI- 368

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                   +C  D      Q +      D   DV      I G      C+ ++ E+   
Sbjct: 369 ------NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG-----FCKAKRVEEGME 417

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + ++GL  +  +Y T+I GL ++GD   A  +F +M   GV  +++ Y+IL+DG  
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G   +A  ++E L  ++ + PN+ TYN+MI G+CK G+ ++  +++  +     + + 
Sbjct: 478 KYGKLEKALVVFEYL-QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + I G C+ G  E A+ ++REM E G   D+  YN +I    R G      EL + 
Sbjct: 537 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 596

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEA 329
           M   G +   S   ++  +L +G+++++
Sbjct: 597 MRSCGFVGDASTISMVINMLHDGRLEKS 624


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 173/641 (26%), Positives = 306/641 (47%), Gaps = 74/641 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSA-TREPGYAHSPHL---------FHHILRRLIDP 51
           ++S+K L++       P+  ++ F  A T  P + H+            F H  R+  D 
Sbjct: 56  ILSSKTLIS------RPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSH--RKFSDA 107

Query: 52  KLV----VHVSRILEL-IEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
           K +    +   R  +L + I +   P    L + I AY ++  P  A  +F++M  +   
Sbjct: 108 KSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL--- 164

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK---SGDLLGALAVFDEMF 162
                                    L+P++ +  T++N LV+   S  +  +   F++  
Sbjct: 165 ------------------------RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAI 200

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G+  NV  +NI+I G+  +  +  A E    ++ + +  P+ VTYN +++ LCK GR 
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFL-NVMGKYNCSPDNVTYNTILDALCKKGRL 259

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            +  ++   MK      +  TY   ++G CK G ++ A  V   M ++ +  D  TYN +
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G C  G+I+E F+L + M     L +VVSYN LI G LE  K+ EA  + E + EK  
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             ++ TH +++   CK                  EG++ DA++ + +M++ G   +  T 
Sbjct: 380 KPNAVTHNIMVKWYCK------------------EGKMDDASNTITKMEESGFSPDCVTY 421

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L+NG+ +A  +  A     EM RK      V+ NT++  LC+ ++  EAY  +    +
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G+  D ++Y  LI G  +   +D ALKL  +  +K   P    YN +I GLC  GK E 
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A+   + + +   +P+  TYNT++ G  + GD +KA +  N ++E   +PD+ + NI L+
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           GLC    +  A +  N  + +G    T+T++ L+ ++   G
Sbjct: 602 GLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 238/481 (49%), Gaps = 42/481 (8%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    ++A   +  + +  L PDV++Y  +INGL   G +  A  + DEM    +  +V
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LI+G  +      A ++ E +  E  V PN VT+N+M+   CK G+ D+      
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++    D  TY + I+G CKAGN+  A R   EM    + +D+VT N ++   CR  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K++E ++L     ++G  ++ VSY  LI G  ++G VD A+ +W+ ++EK     + T+ 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            +I GLC+ G   +AI  LNE+ E G                 EG +  A    N+M ++
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
             K + +TCN L+ G      LE A+ LF     KG +   V+YNTLI  LCK  R  +A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM------- 505
           ++ + EM EK   PD  TY+ +I  L  S +I  A +   + L+KG  P   +       
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNET 707

Query: 506 ----------------YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                           Y+  I  LC+ GK +DA++++   K++    +  TY  LMDGL 
Sbjct: 708 VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLI 767

Query: 550 K 550
           K
Sbjct: 768 K 768



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 262/553 (47%), Gaps = 78/553 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + +F+ A  FLN + +    PD  +Y T+++ L K G L  A  +  +M  RG+  N 
Sbjct: 219 CLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR 278

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+ G+ K G    A  + E L+ + ++ P+V TYN++INGLC  GR +E  ++ D
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIE-LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRD 337

Query: 231 RMKKNEREKDSFTYCSFIHG-----------------------------------LCKAG 255
            M+  +   D  +Y + I+G                                    CK G
Sbjct: 338 EMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            ++ A     +M ESG   D VTYN +I+G+C+AG + E F   + MGRK   ++ V+ N
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++R L    K++EA  +    R++    D  ++G LI G  K+G +++A+++ +E++E 
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE- 516

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                                 +  T N ++ G  Q  K E AI    E+   G  P   
Sbjct: 517 -----------------KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNT+++G C+     +A+ F  +M+E  +KPD+ T ++L+ GLC    ++ ALKL   +
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW 619

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + KG   D   YN LI  LC  G+++DA  L S M+++   P+  TYN ++  L  +G  
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 555 DKALEIWNHILEERLRPD-----------------------IISYNITLKGLCSCSRMSD 591
            +A E  + +LE+   P                         ++Y+  +K LC+  +  D
Sbjct: 680 REAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739

Query: 592 AFEFLNDALCRGI 604
           A     ++  +GI
Sbjct: 740 AMRIFGESKQKGI 752



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 208/450 (46%), Gaps = 42/450 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + E+A +  + +    L PDV SY T+ING ++   +  A  + +EM E+GV+ N
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +NI++  + K+G    A     ++  E+   P+ VTYN +ING CK G   E     
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKM-EESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +   + DS T  + +  LC+   +E A ++     + G F+D V+Y  +I G+ + 
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    +LW+ M  K  + + V+YN +I GL + GK ++AIS    L E     D TT+
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +++G C+ G + KA Q  N++ E                   EG L  A  L N    
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVS 621

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  ++  T N+L+    +  +L++A  L  EM  K   P   +YN +I  L    R  E
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE 681

Query: 452 AYSFVKEMLEKGWKPDMI-----------------------TYSLLINGLCQSKKIDMAL 488
           A  F+ +MLEKG  P  +                        YS  I  LC   K   A+
Sbjct: 682 AEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ++  +  QKG T D + Y  L+ GL    K
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 256/518 (49%), Gaps = 23/518 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+     A R+L+ +   G +PD Y++ ++I G  ++  +  A  +FD+M  RG   +
Sbjct: 21  LCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQD 80

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+GF + G    A E++  +       P++  Y  ++ GLCK GR +E L M 
Sbjct: 81  VVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAGRGEEGLLML 135

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RMK+      +  Y + +   C     + AE + +EM E G+    VT  A+I+ +C+ 
Sbjct: 136 RRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 195

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +   + E+M  +GC  NV +YN L++G    GKV +A+++   +R    N D+ T+
Sbjct: 196 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTY 255

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +LI G C +G++  A ++L  +E  G                 +GR   A SL + ++ 
Sbjct: 256 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 315

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K NA T NSL+NG  ++ K++ A    ++M   GC+P   +Y++ I  LCK++   E
Sbjct: 316 RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 375

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
             SF+ EML+K  KP  + Y+++I+ L + +   +  +   + +  G  PDV  Y   + 
Sbjct: 376 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 435

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++ +A  +   M K     + + YNTLMDG    G  D A+ I   +      P
Sbjct: 436 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 495

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +  +Y I L+ L     + D        + + I  T +
Sbjct: 496 NQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 533



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 226/480 (47%), Gaps = 24/480 (5%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y  VI  L +  DL  AL     M   G   +   +N LI G+ +      A+++++++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            +      +VV+Y  +I G C+ GR DE +E++  M     + D   Y + + GLCKAG 
Sbjct: 73  PLR-GFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGR 127

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-VVSYNI 315
            E    + R M E G       Y A++D  C   K KE  E+ + M  KG    VV+   
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I    + G++ +A+ + EL++ + C  +  T+  L+ G C  G ++KA+          
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM---------- 237

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                   +L+N+M   G   +A T N L+ G      +E+A  L + M   G      +
Sbjct: 238 --------ALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 289

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN LIN LCK  R  +A S    +  +G KP+ +T++ LINGLC+S K+D+A K   + +
Sbjct: 290 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV 349

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G TPD   Y+  I  LC     ++ L     M +++  P+ V Y  ++  L K  +  
Sbjct: 350 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 409

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                W  ++     PD+++Y  +++  C   R+++A   L +    G+   T+ ++ L+
Sbjct: 410 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 469



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 199/395 (50%), Gaps = 22/395 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I  LC+  ++  A R    MV SG   DA T+N++I G+CR  ++    +L++ M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G   +VVSY  LI G  E G++DEA+   EL  E +   D   +  L+ GLCK G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAV---ELFGEMD-QPDMHMYAALVKGLCKAGRG 128

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            + + +L  ++E G                 E +  +A  ++  M + G      TC ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +N + +  ++ +A+ + + M  +GC P V +YN L+ G C   +  +A + + +M   G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD +TY+LLI G C    I+ A +L       G   D   YN LI+ LC  G+ + A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+ +++ R   PN VT+N+L++GL K+G  D A +    ++     PD  +Y+  ++ LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                 +   F+ + L + + P+T+ + I++  ++
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 403



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 249/549 (45%), Gaps = 44/549 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++++   K    ++ L + +RM E+        +       C +R+ ++A+  L  ++EK
Sbjct: 117 ALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEK 176

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P V +   VIN   K G +  AL V + M  RG + NV  YN L+ GF  +G   +A
Sbjct: 177 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  ++ +   V P+ VTYN++I G C  G  +    +   M+ +    D +TY + I+
Sbjct: 237 MALLNKMRV-CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALIN 295

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LCK G  + A  ++  +   GI  +AVT+N++I+G C++GK+   ++  E M   GC  
Sbjct: 296 ALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTP 355

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +  +Y+  I  L +     E +S    + +K+    +  + ++I+ L K        +  
Sbjct: 356 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 415

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E+   G                 EGRL +A +++  M K+G  ++    N+LM+G    
Sbjct: 416 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 475

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLIN-----------------GLCKVERFGEAYS 454
            + ++A+ + K+M+     P   +Y  L+                  G+ K     + + 
Sbjct: 476 GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG 535

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M +  + P+  TYS ++ G  +  + + A  L     +   + +  +Y  L+   C
Sbjct: 536 LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 595

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            + +  DA  L  +M +   +P+L++Y  L+ GL   G  DKA EI+ +   +   PD I
Sbjct: 596 KSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 655

Query: 575 SYNITLKGL 583
            + + + GL
Sbjct: 656 VWKVIIDGL 664



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 225/500 (45%), Gaps = 13/500 (2%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL-------- 110
           R+LEL++++ C        +++Q +       KA+ +  +M  + G     +        
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM-RVCGVNPDAVTYNLLIRG 261

Query: 111 -CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C     E A R L  +   GL  D Y+Y  +IN L K G    A ++FD +  RG++ N
Sbjct: 262 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 321

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N LI+G  K G    A +  E++V      P+  TY+  I  LCK     E L   
Sbjct: 322 AVTFNSLINGLCKSGKVDIAWKFLEKMV-SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 380

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M + + +  +  Y   IH L K  N     R + EMV SG   D VTY   +  +C  
Sbjct: 381 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 440

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E   +   M + G  ++ ++YN L+ G    G+ D A+SI + +       +  T+
Sbjct: 441 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 500

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L+  L +   +   +  L          L D   L + M K+    N+ T +S++ GF
Sbjct: 501 FILLRHLVRMRLVEDVLP-LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 559

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  + E A  L   M     S     Y  L+   CK +R+ +A+  V  M++ G+ P +
Sbjct: 560 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHL 619

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ++Y  L++GL    + D A ++      K ++PD  ++ ++I GL   G  + + ++   
Sbjct: 620 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 679

Query: 529 MKKRNCVPNLVTYNTLMDGL 548
           +++ NC P+  TY  L + L
Sbjct: 680 LERMNCRPSHQTYAMLTEEL 699



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 23/346 (6%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
           TYNA+I   CR   +        +M R G   +  ++N LI G     +VD A  +++ +
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
             +    D  ++  LI G C+ G +++A+++  E                  MD+    +
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGE------------------MDQPDMHM 114

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A    +L+ G  +A + E  + + + M   G  P+  +Y  +++  C   +  EA   +
Sbjct: 115 YA----ALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEML 170

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +EM EKG  P ++T + +IN  C+  ++  AL++      +G  P+V  YN L+ G C+ 
Sbjct: 171 QEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNE 230

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           GKV  A+ L + M+     P+ VTYN L+ G    G  + A  +   +  + L  D  +Y
Sbjct: 231 GKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 290

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           N  +  LC   R   A    +    RGI P  +T++ L+  +  +G
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 336



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 145/313 (46%), Gaps = 22/313 (7%)

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN +IR L     +  A+    L+       D+ T   LI G C+           N+V
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRT----------NQV 62

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           +         A  L ++M   G   +  +  +L+ GF +  +++ A+ LF EM +    P
Sbjct: 63  DV--------ARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----P 110

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +  Y  L+ GLCK  R  E    ++ M E GW+P    Y+ +++  C  +K   A ++ 
Sbjct: 111 DMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEML 170

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  +KG  P V     +I+  C  G++ DAL++   MK R C PN+ TYN L+ G    
Sbjct: 171 QEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNE 230

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   KA+ + N +    + PD ++YN+ ++G C    +  AF  L      G++    T+
Sbjct: 231 GKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 290

Query: 612 HILVRAVMNNGAS 624
           + L+ A+  +G +
Sbjct: 291 NALINALCKDGRT 303


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 170/617 (27%), Positives = 287/617 (46%), Gaps = 38/617 (6%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV---HVSRILELIEIQKCYCPEDVALS 78
           + ++ +  R  G++ +  +F+ + R+   P L      +S +++  E +KC         
Sbjct: 178 IHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKC-------CE 230

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           V +   + + PD    VF   N I       LC+  + E A      + + G+ P+V +Y
Sbjct: 231 VFRVMSEGACPD----VFSFTNVI-----NALCKGGKMENAIELFMKMEKLGISPNVVTY 281

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +INGL ++G L  A  + ++M  +GV+ N+  Y  LI+G  K   + +   + + ++ 
Sbjct: 282 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI- 340

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
            +   PNVV +N +I+G CK G  +  L++ D M        S T  S + G CK+  +E
Sbjct: 341 GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 400

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILI 317
            AE    E++ SG+ +      +++   C+  +    F   ++M  R    + +   +L+
Sbjct: 401 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 460

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            GL ++GK  EA  +W  L EK   A   T   LI+GLC  G L +A +I+ E+ E G  
Sbjct: 461 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 520

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG++     L   M K G + + YT N L+ G     KL++AI L
Sbjct: 521 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 580

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           + E    G    + +Y  ++ G CK  R  +  +   E+L K  + + I Y+++I   CQ
Sbjct: 581 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 640

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +  +  AL+L      KG  P+   Y+ LIHG+C+ G VEDA  L   M+K   VPN+V 
Sbjct: 641 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 700

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ G  K G  D A   W  ++   + P+  +Y + + G C    M  A   L    
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760

Query: 601 CRGILPTTITWHILVRA 617
             GI+P  +T+++L   
Sbjct: 761 ESGIVPDVVTYNVLTNG 777



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 164/628 (26%), Positives = 279/628 (44%), Gaps = 42/628 (6%)

Query: 18  PHTALALFDSATREPGYAHSPHL---FHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           PH + + FD      G   +P     F +        +  +H    L L+ I+  + P  
Sbjct: 69  PHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPA 128

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
             L +    G  ++P   LD  +   EI     G+     +FE         W +     
Sbjct: 129 RLLLIRLIDG--NLPVLNLDSEKFHIEIANALFGLTSVVGRFE---------WTQAFDLL 177

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           ++ Y T    L  S     A+ VF  +  +G   ++   N L+    K  ++ +  E++ 
Sbjct: 178 IHVYSTQFRNLGFSC----AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFR 233

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
             VM     P+V ++  +IN LCK G+ +  +E++ +M+K     +  TY   I+GLC+ 
Sbjct: 234 --VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN 291

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG---KIKECFELWEVMGRKGCLNVV 311
           G ++ A  +  +M   G+  +  TY A+I+G  +     K+    +  E++G     NVV
Sbjct: 292 GRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLD--EMIGSGFNPNVV 349

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            +N LI G  + G ++ A+ I +++  KN    S T   L+ G CK+  +  A   L E+
Sbjct: 350 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 409

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
              G                 + R   A      M     + +      L+ G  +  K 
Sbjct: 410 LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 469

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A  L+  +  KG   + V+ N LI+GLC   +  EA   VKEMLE+G   D ITY+ L
Sbjct: 470 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 529

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I G C   K++   +L  +  ++G  PD+  YN L+ GLC+ GK++DA++L+   K    
Sbjct: 530 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 589

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           + N+ TY  +M+G  K    +    ++N +L +++  + I YNI +K  C    ++ A +
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 649

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            L +   +GILP   T+  L+  V N G
Sbjct: 650 LLENMKSKGILPNCATYSSLIHGVCNIG 677



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 1/176 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+      A + L ++  KG+ P+  +Y ++I+G+   G +  A  + DEM + G   NV
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           VCY  LI G+ K G    A+  W  ++   +++PN  TY VMI+G CK G  ++   +  
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLEMI-SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLI 757

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +MK++    D  TY    +G CKA +++ A +V  +M   G+ VD +TY  ++ G+
Sbjct: 758 KMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 175/556 (31%), Positives = 267/556 (48%), Gaps = 32/556 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE----------AGILCRKRQFEKAKRFLNSLW 127
           S ++AY K    D A  V   M E  GC           AG LCR    E+A  F   + 
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRE-RGCGLNTVTYNVLIAG-LCRSGAVEEAFGFKKDME 284

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + GL PD ++YG +INGL KS     A A+ DEM    ++ NVV Y  LIDGF ++G+  
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ + +V    V PN +TY+ ++ GLCK G+ D    +  +M ++    D+ TY   
Sbjct: 345 EAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I G  +  + + A R+  EM  +GI  +  TY+ MI G C++G+ ++  +L E M  KG 
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N   Y  LI G    G V  A  I++ + + N   D   +  LI GL K         
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK--------- 514

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR+ ++     +M + G   N +T + L++G+++   LE+A  L + M  
Sbjct: 515 ---------VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P  V Y  L+    K +   +  S  K ML++G   D   Y +LI+ L  S  ++ 
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A ++     + G  PDV +Y+ LI GLC     E A  +   M K+   PN+V YN L+D
Sbjct: 626 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 685

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K+GD   A  ++N IL + L P+ ++Y   + G C    +S+AF   N+ L  GI P
Sbjct: 686 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745

Query: 607 TTITWHILVRAVMNNG 622
               + +L     + G
Sbjct: 746 DAFVYSVLTTGCSSAG 761



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 245/496 (49%), Gaps = 19/496 (3%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           +G+ +    K  +   A  V  EM ERG   N V YN+LI G  + G    A   +++ +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDM 283

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  + P+  TY  +INGLCK  R +E   + D M   E + +   Y + I G  + GN 
Sbjct: 284 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 343

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
           + A ++ +EMV +G+  + +TY+ ++ G C+ G++     L + M R     + ++YN++
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I G   +    +A  +   +     + +  T+ ++I+GLC++G   KA  +L E+   G 
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           EG ++ A  + ++M K     + Y  NSL+ G  +  ++E +  
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F +M  +G  P   +Y+ LI+G  K      A   V+ ML+ G KP+ + Y  L+    
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S  I+         L +G   D  +Y ILIH L S+G +E A ++ S ++K   VP++ 
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            Y++L+ GL KT D +KA  I + + ++ + P+I+ YN  + GLC    +S A    N  
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703

Query: 600 LCRGILPTTITWHILV 615
           L +G++P  +T+  L+
Sbjct: 704 LAKGLVPNCVTYTSLI 719



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 228/451 (50%), Gaps = 21/451 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R    + A R L+ +   G+ P+VY+Y  +I+GL +SG+   A  + +EM  +G++ N  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G+ ++G+   A EI++++  + +V P++  YN +I GL K GR +E  + + +
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++     + FTY   IHG  K G++E AE++ + M+++G+  + V Y  +++ + ++  
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I++    ++ M  +G  L+   Y ILI  L  +G ++ A  +   + +     D   +  
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK     KA  IL+E                  M K G   N    N+L++G  +
Sbjct: 648 LISGLCKTADREKAFGILDE------------------MSKKGVDPNIVCYNALIDGLCK 689

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  +  A  +F  +  KG  P  V+Y +LI+G CKV     A+    EML  G  PD   
Sbjct: 690 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 749

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+L  G   +  ++ A+ L  +   +G    ++ +N L+ G C  GK+++ L+L   + 
Sbjct: 750 YSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIM 808

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            R  VPN +T   ++ GL + G   +   I+
Sbjct: 809 GRGLVPNALTIENIISGLSEAGKLSEVHTIF 839



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 19/345 (5%)

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           + + ++ +C+  +     ++   M  +GC LN V+YN+LI GL  +G V+EA    + + 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +     D  T+G LINGLCK+   N+A  +L+E                  M     K N
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDE------------------MSCAELKPN 326

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
                +L++GF++    + A  + KEM   G  P  ++Y+ L+ GLCK+ +   A   +K
Sbjct: 327 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 386

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+    +PD ITY+L+I G  +      A +L  +    G +P+V  Y+I+IHGLC +G
Sbjct: 387 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 446

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + E A  L   M  +   PN   Y  L+ G  + G+   A EI++ + +  + PD+  YN
Sbjct: 447 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 506

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + GL    R+ ++ ++      RG+LP   T+  L+   + NG
Sbjct: 507 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 551



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 173/361 (47%), Gaps = 4/361 (1%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +    EK      S+ ++G+  D   YG +I+ L  SG++  A  V   + + G   +V 
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ LI G  K  D  +A  I + +  +  V PN+V YN +I+GLCK G       +++ 
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMS-KKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +       +  TY S I G CK G++  A  +Y EM+ +GI  DA  Y+ +  G   AG 
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 762

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +++   L E M  +G  ++ S+N L+ G  + GK+ E + +  ++  +    ++ T   +
Sbjct: 763 LEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 822

Query: 352 INGLCKNGYLNKAIQILNEVEE-GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           I+GL + G L++   I  E+++   E      +SL   M   G K+     + ++    +
Sbjct: 823 ISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCK 881

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG-WKPDMI 469
              L+ A+ L   +  K       SY  +++ LC+  +  EA + +KEM ++G  +P ++
Sbjct: 882 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 941

Query: 470 T 470
            
Sbjct: 942 A 942


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 160/546 (29%), Positives = 277/546 (50%), Gaps = 30/546 (5%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P  V  S +I AY K    DKA  +F  M          ++      L +  + E  +R 
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L    +KG+K DV  + + ++  VK GDL   + ++  M   G+  NVV  +ILI GF +
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G  + A  ++ + +++    P+++TY+ +I G CK G   +   +++ M K   E D+ 
Sbjct: 425 NGRILEACGLFVQ-ILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTI 483

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
            Y   I+GLCK G V  A R + + V  G+  +  T N ++D FCR   I    +++ +M
Sbjct: 484 VYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM 543

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           G      + V+Y ILI+G  + G+VDEA+ ++  + +K+   D  T+  LI+GLCK   L
Sbjct: 544 GMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCK---L 600

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            K+               +    + + M K+    +    N L+N   +   LE A+ LF
Sbjct: 601 KKS---------------SAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLF 645

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             +  +G  P V ++NT+I   C  +R  +A     +M  +  +P+ IT+++LI+  C+ 
Sbjct: 646 VHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCRE 705

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHG-LCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            ++D A+ +  + L++G  P++  Y+ LIHG   S   +E  L+LY+ M + N  PN+V+
Sbjct: 706 GRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVS 765

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y+ L+DGL K G   +A   +   L++ L PD+I+Y I ++G C   R+++A    ++ L
Sbjct: 766 YSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825

Query: 601 CRGILP 606
              + P
Sbjct: 826 LNRLTP 831



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 260/517 (50%), Gaps = 21/517 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++   +KA    + +   G+ PD+  Y  +I+GL K+G L     +     ++G++ +V
Sbjct: 318 CKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDV 377

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V ++  +D + K GD  R  +I++R++ E  + PNVV+ +++I G C+ GR  E   ++ 
Sbjct: 378 VGFSSAMDAYVKIGDLGRVIQIYKRMLNE-GISPNVVSCSILIKGFCQNGRILEACGLFV 436

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++ K   E    TY + I G CK+GN+     +Y +M++     D + Y+ +I+G C+ G
Sbjct: 437 QILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQG 496

Query: 291 KIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + +    + + + R    NV + N L+        +  A+ ++ L+   N  AD+ T+ 
Sbjct: 497 LVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYT 556

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI G         A Q          GR+ +A  L  +M K   K +  T  +L++G  
Sbjct: 557 ILIKG---------AAQF---------GRVDEALMLFFQMLKKDFKPDVITYCTLIDGLC 598

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K    + +F  M +   +P +  YN LIN   +      A      ++E+G KPD+ 
Sbjct: 599 KLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVF 658

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T++ +I   C  K++D A++L  +   +   P+   + ILI   C  G+++DA+ ++S M
Sbjct: 659 TFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKM 718

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDC-DKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            +    PNLVTY+ L+ G FK+    +  L+++N +LE  + P+I+SY+I + GLC    
Sbjct: 719 LEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGL 778

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           M +A      AL + +LP  I + IL+R     G  T
Sbjct: 779 MKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLT 815



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 224/465 (48%), Gaps = 23/465 (4%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V Y  LI+ + +KG + ++ +I+  + V    V PNVV   +++  L      +  ++ +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY--LLLGSLIDSHCVEVIVDKY 225

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +    RE+    Y   ++     G VE   R ++ +V+ G  +D +T N ++ G    
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             I    + + ++ R G   NVV+++ LI    + G +D+A  +++++       D   +
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
            +LI+GL K G L    ++L    + G                  G L     +  RM  
Sbjct: 346 SILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLN 405

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  +C+ L+ GF Q  ++  A  LF ++ + G  P++++Y+ LI G CK     +
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRD 465

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            +   ++M++K  +PD I YS+LINGLC+   +  AL+   Q + +G +P+V   N L+ 
Sbjct: 466 GFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C    +  A+++Y  M   N   + VTY  L+ G  + G  D+AL ++  +L++  +P
Sbjct: 526 SFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKP 585

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILV 615
           D+I+Y   + GLC   + S A   + D +C+  + P    +++L+
Sbjct: 586 DVITYCTLIDGLCKLKK-SSAGLCIFDFMCKNAVAPDIAIYNVLI 629



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 168/360 (46%), Gaps = 18/360 (5%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI----- 330
           +V Y  +I+ +CR G   +  +++  +  KG     +   L+ G L +    E I     
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226

Query: 331 -----------SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--GEG 377
                      S++E +  +  N      G+  +     G     I   N++ +G   + 
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            +  A    N + + G K N  T ++L++ + +   L+ A  LF  M+  G +P ++ Y+
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI+GL K  R  +    +   L+KG K D++ +S  ++   +   +   +++  + L +
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G +P+V   +ILI G C  G++ +A  L+  + K    P+++TY+ L+ G  K+G+    
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             ++  ++++R  PD I Y++ + GLC    + DA  F   A+ RG+ P   T + L+ +
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 159/350 (45%), Gaps = 35/350 (10%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWE--------------LLREKNCNADSTTH----G 349
           L+  S+  L+  LL+N     A  +++                R+  C+ DST H    G
Sbjct: 112 LSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRDGFCDLDSTNHSVVYG 171

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------EGRLADAASLVNRMDKHGCKLNA 398
            LI   C+ G  +K++ I   V   G            G L D+  +   +DK+G   +A
Sbjct: 172 FLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSA 231

Query: 399 Y------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
                      +MN F+   ++E  +   K + + G    +++ N ++ G+      G A
Sbjct: 232 MREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVA 291

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
             +   ++  G KP+++T+S LI+  C+   +D A  L       G TPD+ +Y+ILI G
Sbjct: 292 DDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDG 351

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           L  AG++ED  +L      +    ++V +++ MD   K GD  + ++I+  +L E + P+
Sbjct: 352 LFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPN 411

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++S +I +KG C   R+ +A       L  G  P+ +T+  L+     +G
Sbjct: 412 VVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 23/284 (8%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+ +L  + +  T   L   A +      +  LF  +L++   P ++ + + I  L +++
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 68  KC---------YCPEDVALSV------IQAYGKNSMPDKALDVFQRMNE--------IFG 104
           K           C   VA  +      I  + +    + AL +F  + E         F 
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                 C  ++ + A +    +  + L+P+  ++  +I+   + G +  A+ +F +M E 
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G E N+V Y+ LI G+FK    M +       ++E ++ PN+V+Y+++I+GLCK G   E
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
               +          D   Y   I G CK G +  A  +Y  M+
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 246/487 (50%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  ++  L K    L A+++  +M  +G+  N V  NILI+ F   G    +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+ +T N ++ GLC  G   + L   D++     + D  +Y + ++GLC
Sbjct: 68  LGK-ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G    A ++ R + +     + V YN +IDG C+   + E ++L+  M  +G   + +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G++  A S+ + +  KN N     + +LIN LCK              
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCK-------------- 232

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG + +A +L+  M K G K    T ++LM+G+    +++NA  +F  M + G +P
Sbjct: 233 ----EGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SYN +INGLCK +R  EA + ++EML K   PD +TY+ LI+GLC+S +I  AL L 
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y  L+  LC    ++ A  L+  MK+R   P + TY  L+DGL K 
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A E++ H+L +    D+ +Y + + GLC      +A    +     G +P  +T+
Sbjct: 409 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468

Query: 612 HILVRAV 618
            I++R++
Sbjct: 469 EIIIRSL 475



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 230/461 (49%), Gaps = 24/461 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + +K+  F + +  +G + D  SYGT++NGL K G+   A+ +   + +R    N
Sbjct: 90  LCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPN 149

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +IDG  K      A +++  +     ++P+ +TY  +I G C  G+      + 
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLYSEMDAR-GIFPDAITYTTLIYGFCLLGQLMGAFSLL 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M         + Y   I+ LCK GNV+ A+ +   M + GI    VTY+ ++DG+C  
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLV 268

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++   +++  M + G   NV SYNI+I GL +  +VDEA+++   +  KN   D+ T+
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 328

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK+                  GR+  A +L+N M   G   +  T  SL++  
Sbjct: 329 NSLIDGLCKS------------------GRITSALNLMNEMHHRGQPADVVTYTSLLDAL 370

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A  LF +M  +G  PT+ +Y  LI+GLCK  R   A    + +L KG   D+
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDV 430

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I+GLC+    D AL +  +    G  P+   + I+I  L    + + A +L   
Sbjct: 431 WTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE 490

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           M  +     L+  +  +  +F   + DKA ++ + ++ + L
Sbjct: 491 MIAK----GLLVLDFKVADVFVQNENDKAEKLLHEMIAKGL 527



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 225/454 (49%), Gaps = 20/454 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ +N ++    K   Y+ A  + +++ ++  +  N VT N++IN  C  G+      + 
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVK-GIRANFVTLNILINCFCHLGQMAFSFSVL 68

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++ K   + D+ T  + + GLC  G V+ +   + ++V  G  +D V+Y  +++G C+ 
Sbjct: 69  GKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKI 128

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ +   +L  ++  R    NVV YN +I GL ++  V+EA  ++  +  +    D+ T+
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY 188

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G C                    G+L  A SL++ M         Y  N L+N  
Sbjct: 189 TTLIYGFCL------------------LGQLMGAFSLLDEMILKNINPGVYIYNILINAL 230

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A  L   M+++G  P VV+Y+TL++G C V     A      M++ G  P++
Sbjct: 231 CKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNV 290

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +Y+++INGLC+ K++D A+ L  + L K   PD   YN LI GLC +G++  AL L + 
Sbjct: 291 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 350

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  R    ++VTY +L+D L K  + DKA  ++  + E  ++P + +Y   + GLC   R
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 410

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +A E     L +G      T+ +++  +   G
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 444



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 206/405 (50%), Gaps = 20/405 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ  +  +G     LC+  +   A + L  + ++  +P+V  Y T+I+GL K   +  A 
Sbjct: 111 FQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            ++ EM  RG+  + + Y  LI GF   G  M A  + + ++++ ++ P V  YN++IN 
Sbjct: 171 DLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK-NINPGVYIYNILINA 229

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G   E   +   M K   +    TY + + G C  G V+ A++++  MV+ G+  +
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
             +YN MI+G C+  ++ E   L   M  K  + + V+YN LI GL ++G++  A+++  
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  +   AD  T+  L++ LCKN  L+K                  A +L  +M + G 
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDK------------------ATALFMKMKERGI 391

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           +   YT  +L++G  +  +L+NA  LF+ +  KGC   V +Y  +I+GLCK   F EA +
Sbjct: 392 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
              +M + G  P+ +T+ ++I  L +  + D A KL  + + KG 
Sbjct: 452 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 205/420 (48%), Gaps = 19/420 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P ++ +N ++  L K  ++   + +  +M+      +  T    I+  C  G +  +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLE 322
             ++++ G   D +T N ++ G C  G++K+     + V+ +   ++ VSY  L+ GL +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+   A+ +  ++ +++   +   +  +I+GLCK+  +N+A  + +E            
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE------------ 175

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                 MD  G   +A T  +L+ GF    +L  A  L  EM  K  +P V  YN LIN 
Sbjct: 176 ------MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK     EA + +  M ++G KP ++TYS L++G C   ++  A ++    +Q G  P+
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YNI+I+GLC   +V++A+ L   M  +N VP+ VTYN+L+DGL K+G    AL + N
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +       D+++Y   L  LC    +  A         RGI PT  T+  L+  +   G
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 175/350 (50%), Gaps = 19/350 (5%)

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           + +N ++    +  +      L + M  KG   N V+ NILI      G++  + S+   
Sbjct: 11  IEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGK 70

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + +     D+ T   L+ GLC  G + K++   ++V                     G +
Sbjct: 71  ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVA------------------QGFQ 112

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
           ++  +  +L+NG  +  +   A+ L + +  +   P VV YNT+I+GLCK +   EAY  
Sbjct: 113 MDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDL 172

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
             EM  +G  PD ITY+ LI G C   ++  A  L  + + K   P V +YNILI+ LC 
Sbjct: 173 YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCK 232

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G V++A  L + M K    P +VTY+TLMDG    G+   A +I++ +++  + P++ S
Sbjct: 233 EGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYS 292

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YNI + GLC C R+ +A   L + L + ++P T+T++ L+  +  +G  T
Sbjct: 293 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 104/186 (55%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P ++ +N ++  L K++++  A S  K+M  KG + + +T ++LIN  C   ++  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + L+ G+ PD    N L+ GLC  G+V+ +L  +  +  +    + V+Y TL++GL 
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G+   A+++   I +   RP+++ YN  + GLC    +++A++  ++   RGI P  I
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 610 TWHILV 615
           T+  L+
Sbjct: 187 TYTTLI 192



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 17/241 (7%)

Query: 36  HSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE-DVALSVI-QAYGKNSMPDKAL 93
           ++  +FH +++  ++P +  +   I  L     C C   D A++++ +   KN +PD   
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNIMINGL-----CKCKRVDEAMNLLREMLHKNMVPDTV- 326

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
                    +      LC+  +   A   +N +  +G   DV +Y ++++ L K+ +L  
Sbjct: 327 --------TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A A+F +M ERG++  +  Y  LIDG  K G    A+E+++ L+++     +V TY VMI
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI-DVWTYTVMI 437

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +GLCK G FDE L +  +M+ N    ++ T+   I  L +    + AE++  EM+  G+ 
Sbjct: 438 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497

Query: 274 V 274
           V
Sbjct: 498 V 498



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 54/125 (43%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           TP +  +N ++  L    +   A+ L   M+ +    N VT N L++     G    +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +   IL+   +PD I+ N  +KGLC    +  +  F +  + +G     +++  L+  + 
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 620 NNGAS 624
             G +
Sbjct: 127 KIGET 131


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 236/436 (54%), Gaps = 23/436 (5%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +  +  + D   Y T+I GL K+     AL +   M   G + +VV Y  LIDG  K GD
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A+ + +++  +    PNVVTY  +I+GLCK  R  + ++   RM ++  E D  TY 
Sbjct: 61  LDAAQALLQKMA-DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYN 119

Query: 246 SFIHGLCKAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
           S IHGLC A  ++ A  V +E M+ESG   D VTYN  I G C+AGK+ +  E+ E M R
Sbjct: 120 SLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 305 KG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   +VV++  +I GL +  ++D+A  +++ + E+ C  DS T+ ++++ L +   L+ 
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
             ++L  + + G   L                  + T   L++  I+A  +E+A + +++
Sbjct: 240 VEEVLEHMVKSGHYAL------------------SATYAPLIHALIRAGDIESASWAYEQ 281

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
               GC   V ++N  I  LC+  +F  A + +  M+E G  P++++Y+ +I+GLC+S  
Sbjct: 282 AMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 341

Query: 484 IDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVTY 541
           +D A KL  + L  G   PDV  +N LI G C AG++  A QL   MK +N CVP++VTY
Sbjct: 342 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401

Query: 542 NTLMDGLFKTGDCDKA 557
           NT++DG  K G   +A
Sbjct: 402 NTMIDGQSKFGSLKQA 417



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 193/376 (51%), Gaps = 23/376 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    + A+  L  + + G  P+V +Y  +I+GL K+     A+     M   G E +
Sbjct: 55  LCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN LI G         A  + + L++E+   P+VVTYN  I+GLCK G+ D+ LEM 
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     D  T+CS I GLCKA  ++ A +V++ M+E G   D++TY+ M+D   RA
Sbjct: 175 EEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA 234

Query: 290 GKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++    E+ E M + G   +  +Y  LI  L+  G ++ A   +E   E  C  +  TH
Sbjct: 235 NRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTH 294

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
              I  LC++G    A  IL  + E G        SL N +          + N +++G 
Sbjct: 295 NAFIGALCRSGKFPLAKNILLGMIESG--------SLPNLL----------SYNFVIDGL 336

Query: 409 IQASKLENAIFLFKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KP 466
            ++  +++A  L ++M   G C P V+ +NTLI+G CK  R  +A   +KEM  K    P
Sbjct: 337 CKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVP 396

Query: 467 DMITYSLLINGLCQSK 482
           D++TY+ +I+G  QSK
Sbjct: 397 DVVTYNTMIDG--QSK 410



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 197/416 (47%), Gaps = 59/416 (14%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D+  Y + I GLCKA     A  +   M  +G     VTY  +IDG C++G +     L 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M   GC  NVV+Y  LI GL +  +  +AI   + +    C  D  T+  LI+GLC  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 359 GYLNKAIQILNE--VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
             ++ A  +L E  +E G   R+ D                  T N+ ++G  +A KL+ 
Sbjct: 129 NRMDDAGLVLQELMIESG---RIPDVV----------------TYNTFISGLCKAGKLDK 169

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
            + + +EM R G SP VV++ ++I+GLCK  R  +A+   K MLE+G  PD +TYS++++
Sbjct: 170 GLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLD 229

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV- 535
            L ++ ++D   ++    ++ G       Y  LIH L  AG +E A   Y    +  CV 
Sbjct: 230 NLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVM 289

Query: 536 ----------------------------------PNLVTYNTLMDGLFKTGDCDKALEIW 561
                                             PNL++YN ++DGL K+G+ D A ++ 
Sbjct: 290 EVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLS 349

Query: 562 NHILEERL-RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI-LPTTITWHILV 615
             +L+    +PD+I +N  + G C   R+S A + L +   + I +P  +T++ ++
Sbjct: 350 RKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 186/372 (50%), Gaps = 26/372 (6%)

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
           +DA  YN +I G C+A K +   EL  VM   G   +VV+Y  LI GL ++G +D A ++
Sbjct: 8   LDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQAL 67

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRLADAASLV----- 386
            + + +  C  +  T+  LI+GLCK    + AIQ +   +  G E  L    SL+     
Sbjct: 68  LQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCM 127

Query: 387 -NRMDKHGCKL-----------NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            NRMD  G  L           +  T N+ ++G  +A KL+  + + +EM R G SP VV
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           ++ ++I+GLCK  R  +A+   K MLE+G  PD +TYS++++ L ++ ++D   ++    
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           ++ G       Y  LIH L  AG +E A   Y    +  CV  + T+N  +  L ++G  
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF----LNDALCRGILPTTIT 610
             A  I   ++E    P+++SYN  + GLC    + DA++     L+   C+   P  I 
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK---PDVIF 364

Query: 611 WHILVRAVMNNG 622
           ++ L+      G
Sbjct: 365 FNTLISGFCKAG 376



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 135/222 (60%), Gaps = 1/222 (0%)

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           +L+A   N+L+ G  +A K  +A+ L   M+  G   +VV+Y TLI+GLCK      A +
Sbjct: 7   RLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQA 66

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            +++M + G  P+++TY+ LI+GLC++++   A++   + L+ G  PD+  YN LIHGLC
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 515 SAGKVEDA-LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
            A +++DA L L   M +   +P++VTYNT + GL K G  DK LE+   +    + PD+
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++   + GLC  +R+ DAF+     L RG +P ++T+ I++
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIML 228



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 1/165 (0%)

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M  + ++ D   Y+ LI GLC+++K   AL+L       G+   V  Y  LI GLC +G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ A  L   M    C PN+VTY  L+DGL K      A++    +L     PD+++YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 579 TLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNNG 622
            + GLC  +RM DA   L + +   G +P  +T++  +  +   G
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAG 165



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-V 166
           G LCR  +F  AK  L  + E G  P++ SY  VI+GL KSG++  A  +  +M + G  
Sbjct: 299 GALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCC 358

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           + +V+ +N LI GF K G   +A+++ + +  +    P+VVTYN MI+G  K G   +  
Sbjct: 359 KPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAK 418

Query: 227 EMWDRMK 233
            + + M+
Sbjct: 419 LLLEEMQ 425


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 254/514 (49%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + +QF        ++ E   +P  + YG  I   VK  D+   L +F+ M    +  +
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS 213

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN+LIDG  K      A+++++ + +   + P+++TYN +I+G CK G  ++  ++ 
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEM-LARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RMK +  E    T+ + + GL KAG VE AE V +EM + G   DA T++ + DG+   
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K +    ++E     G  +N  + +IL+  L + GK+++A  I      K    +   +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+G C+                  +G L  A   +  M+K G K +    N L+  F
Sbjct: 393 NTMIDGYCR------------------KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  ++ENA     +M  KG SP+V +YN LI G  +   F + +  +KEM + G  P++
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ++Y  LIN LC+  K+  A  +      +G +P V +YN+LI G CS GK+EDA +    
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M K+    NLVTYNTL+DGL  TG   +A ++   I  + L+PD+ +YN  + G      
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +        +    GI PT  T+H+L+      G
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 257/578 (44%), Gaps = 52/578 (8%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           +  LF  +L R + P L+ + +                    +I  Y K   P+K+  V 
Sbjct: 233 AEQLFDEMLARRLLPSLITYNT--------------------LIDGYCKAGNPEKSFKVR 272

Query: 97  QRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           +RM           F      L +    E A+  L  + + G  PD +++  + +G   +
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
                AL V++   + GV+ N    +IL++   K+G   +A+EI  R  M   + PN V 
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR-EMAKGLVPNEVI 391

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN MI+G C+ G         + M+K   + D   Y   I   C+ G +E AE+   +M 
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
             G+     TYN +I G+ R  +  +CF++ + M   G + NVVSY  LI  L +  K+ 
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           EA  +   + ++  +     + +LI+G C                   +G++ DA     
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCC------------------SKGKIEDAFRFSK 553

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K G +LN  T N+L++G     KL  A  L  E+SRKG  P V +YN+LI+G     
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
                 +  +EM   G KP + TY LLI+ LC  + I++  +L   F +    PD+ +YN
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERL---FGEMSLKPDLLVYN 669

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            ++H     G +E A  L   M +++   +  TYN+L+ G  K G   +   + + +   
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            + P+  +YNI +KG C       A+ +  +   +G L
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 251/516 (48%), Gaps = 27/516 (5%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQ-- 97
           F+ +L+ L    +V     +L+ ++    + P+    S++   Y  N   + AL V++  
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMK-DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 98  -----RMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                +MN  + C      LC++ + EKA+  L     KGL P+   Y T+I+G  + GD
Sbjct: 346 VDSGVKMN-AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           L+GA    + M ++G++ + + YN LI  F + G+   A++   ++ ++  V P+V TYN
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYN 463

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++I G  +   FD+C ++   M+ N    +  +Y + I+ LCK   +  A+ V R+M + 
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           G+      YN +IDG C  GKI++ F   + M +KG  LN+V+YN LI GL   GK+ EA
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNR 388
             +   +  K    D  T+  LI+G    G + + I +  E++  G +  L     L++ 
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643

Query: 389 MDKHGCKL------------NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
             K G +L            +    N +++ +     +E A  L K+M  K       +Y
Sbjct: 644 CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY 703

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N+LI G  KV +  E  S + EM  +  +P+  TY++++ G C+ K    A     +  +
Sbjct: 704 NSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQE 763

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           KGF  DV + N L+ GL    + ++A  + S M  R
Sbjct: 764 KGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 3/196 (1%)

Query: 430 SPTV---VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           SP++    SY  L   L + +   EA      +  +G  P   + +LL++ L ++K+  +
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            + +    L+  F P   MY   I        V   L+L++ MK     P++  YN L+D
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    + A ++++ +L  RL P +I+YN  + G C       +F+         I P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282

Query: 607 TTITWHILVRAVMNNG 622
           + IT++ L++ +   G
Sbjct: 283 SLITFNTLLKGLFKAG 298


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 265/536 (49%), Gaps = 23/536 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLL--GALAVFDEMFERGVE 167
            R R    A + L+SL  + G++P + +   V++ L +S   L   +L VF  + E  + 
Sbjct: 146 ARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLH 205

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   +N+L+     KG    A      +     + P+ VTYN ++N  C+ G   E   
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTM-QGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  RMK++       TY + +    + G ++ A +V   M   G   D  TYN +  G C
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLC 324

Query: 288 RAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           +AGK+ E F L + M R G    +VV+YN L+    +     +A+ + E +R+K      
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            TH +++  LCK G L +A+  L ++ E G                  G +A A +L++ 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G K++ +T N+++    +  + E+A  L     ++G  P  VSY T++    K   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A     +M+E+   P + TY+ LI GLC+ +++  A+    +F++KG  PD T YNI
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +IH  C  G +E+A + ++ M + +  P++VT NTLM+GL   G  DKAL+++   +E+ 
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + D+I+YN  ++ +C    +  A  F +D   +G+ P   T+++++ A+   G S
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 262/554 (47%), Gaps = 34/554 (6%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR-----------F 122
           D ALS   AY +  +P  A  +   +    G    +           R            
Sbjct: 139 DAALS---AYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDV 195

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             SL E  L P+ Y++  +++     G L  ALA    M   G+  + V YN L++   +
Sbjct: 196 FRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           KG    A+ +  R+  +  + P   TYN +++   + G   +  ++ + M     E D  
Sbjct: 256 KGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGI-FVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           TY     GLC+AG V+ A R+  EM   G    D VTYN ++D   +     +   L E 
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KG    +V++NI+++ L + GK++EA+   E + E+    D  T+  LI+  CK G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           + KA  +++E+   G                   R  DA  L++   + G   +  +  +
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +M  + +    E A+ L+ +M  +   P++ +YNTLI GLC++ER  EA   + E +EKG
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD  TY+++I+  C+   ++ A +   + ++  F PDV   N L++GLC  GK++ AL
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+ +  ++    +++TYNTL+  + K GD D AL  ++ +  + L+PD  +YN+ L  L
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674

Query: 584 CSCSRMSDAFEFLN 597
               R  +A   L+
Sbjct: 675 SEAGRSEEAHNMLH 688



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 248/600 (41%), Gaps = 134/600 (22%)

Query: 84  GKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
             +++P  +LDVF+ + E+        F       C K     A   L+++   GL PD 
Sbjct: 184 SPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDA 243

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T++N   + G L  A A+   M   G+      YN L+  F + G   +A ++ E 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVES 303

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTY---------- 244
           +       P++ TYNV+  GLC+ G+ DE   + D M++      D  TY          
Sbjct: 304 MTA-YGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKW 362

Query: 245 -CS------------------------FIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            CS                         +  LCK G +E A     ++ E G+  D +TY
Sbjct: 363 RCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITY 422

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG------CLNVVSYNI-----------LIRGLLE 322
           N +ID +C+AG + + F L + M  KG       LN V YN+           L+    +
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ 482

Query: 323 NGKVDEAIS-------------------IWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G V + +S                   +W+ + E+      +T+  LI GLC+   L +
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           AI  LNE  E G                 EG L +A    N+M ++  K +  TCN+LMN
Sbjct: 543 AIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G     KL+ A+ LF+    KG    V++YNTLI  +CKV     A  F  +M  KG +P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 467 DMITYSLLINGLCQSKKID--------------MALKLCCQFLQKGFTPDVTM------- 505
           D  TY+++++ L ++ + +              ++    C  L+     +  +       
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKP 722

Query: 506 ---------------YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                          Y   ++GLC+ G++++A  +   M ++    +  TY TLM+GL K
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 194/410 (47%), Gaps = 54/410 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF------- 162
           LC++ + E+A   L  + E+GL PDV +Y T+I+   K+G++  A  + DEM        
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 163 ----------------------------ERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                                       +RG   + V Y  ++  +FK+ +   A  +W+
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           +++ E  + P++ TYN +I GLC+  R  E ++  +   +     D  TY   IH  CK 
Sbjct: 514 QMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G++E A R + +MVE+    D VT N +++G C  GK+ +  +L+E    KG  ++V++Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI+ + + G VD A+  ++ +  K    D+ T+ V+++ L + G   +A  +L+++ +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G+   + A  L+         +  +       G  +A           E S K     +
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEH------EGKPEA-----------ESSEKAQDNAL 735

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            +Y   +NGLC   +  EA + + EM++KG   D  TY  L+ GL + +K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)

Query: 66  IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQF 116
           ++K   P++   ++I  AY K    + A     +M E      +  C   +  LC   + 
Sbjct: 551 VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKL 610

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           +KA +   S  EKG K DV +Y T+I  + K GD+  AL  FD+M  +G++ +   YN++
Sbjct: 611 DKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC----LEMWDRM 232
           +    + G    A  +  +L     +  +          L K    DE      E     
Sbjct: 671 LSALSEAGRSEEAHNMLHKLADSGKLSQSFAC------PLLKPSSADEADVKEHEGKPEA 724

Query: 233 KKNEREKDSF--TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           + +E+ +D+   TY   ++GLC  G ++ A+ V  EM++ G+ VD  TY  +++G  +  
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQ 784

Query: 291 K 291
           K
Sbjct: 785 K 785


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 259/504 (51%), Gaps = 20/504 (3%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A    N L  +   P  + +  ++  LVKS      L +  +M  RG++ N+V  NIL
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+ F + G    A  ++ + +++    P+ +T+  +I GLC  G+  +     D++    
Sbjct: 127 INCFCQLGLIPFAFSVFAK-ILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D  +Y + IHGLCK G    A  + + +  + +  + V YN +ID  C+   + E F
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 297 ELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           +L+  M  KG   +VV+Y+ LI G    GK+++AI ++  +  +N   D  T  +L+N  
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK                  +G++ +  ++ + M K G K N  T NSLM+G+    ++ 
Sbjct: 306 CK------------------DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  +F  M++ G +P + SY+ +ING CK+++F EA +  KEM  K   PD++TYS LI
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +GL +S +I  AL+L  Q   +G  P +  YN ++  LC   +V+ A+ L + +K +   
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PN+ TY+ L+ GL ++G  + A +++  +L +    ++ +Y I ++G C     ++A   
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527

Query: 596 LNDALCRGILPTTITWHILVRAVM 619
           L+     G +P   T+ I++ ++ 
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLF 551



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 248/504 (49%), Gaps = 21/504 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           QF K   F N +     K +  SY +       + D+  A+++F+ +  R        +N
Sbjct: 31  QFLKNTHF-NFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFN 89

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++    K   Y     + +++     + PN+V  N++IN  C+ G       ++ ++ K
Sbjct: 90  KILGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D+ T+ + I GLC  G ++ A   + ++V  G   D ++Y  +I G C+ G+ + 
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 295 CFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L + V G     NVV YN +I  + +   V+EA  ++  +  K  + D  T+  LI+
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G C          IL        G+L DA  L N+M     K + YT N L+N F +  K
Sbjct: 269 GFC----------IL--------GKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++    +F  M ++G  P  V+YN+L++G C V+   +A S    M + G  PD+ +YS+
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +ING C+ KK D A+ L  +  +K   PDV  Y+ LI GL  +G++  ALQL   M  R 
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P + TYN+++D L K    DKA+ +   + ++ ++P++ +Y+I +KGLC   ++ DA 
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           +     L +G      T+ I+++ 
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQG 514



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 265/528 (50%), Gaps = 35/528 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNS 125
           S    +  N+  D A+ +F R+            N+I G     L + + +         
Sbjct: 55  STSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGS----LVKSKHYHTVLYLSQK 110

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +  +G+KP++ +   +IN   + G +  A +VF ++ + G   + + +  LI G   KG 
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A    +++V     + + ++Y  +I+GLCK G     L++  R+  N  + +   Y 
Sbjct: 171 IQQAFLFHDKVV-ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I  +CK   V  A  ++ EM+  GI  D VTY+A+I GFC  GK+ +  +L+  M  +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               +V ++NIL+    ++GK+ E  ++++++ ++    +  T+  L++G C    +NKA
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 365 IQILNEVEEGGEG-----------------RLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             I N + +GG                   +  +A +L   M +     +  T +SL++G
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             ++ ++  A+ L  +M  +G  PT+ +YN++++ LCK+ +  +A + + ++ +KG +P+
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           M TYS+LI GLCQS K++ A K+    L KG   +V  Y I+I G C  G   +AL L S
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            M+   C+P+  TY  ++  LFK  + D A ++   ++   +RP  I+
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 174/629 (27%), Positives = 304/629 (48%), Gaps = 46/629 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSA--TREPGYAHSPHLFHHI--LRRLIDPKLVVHVS 58
           + A RLL    +   P TA A   +    R+  YAHS  +   +  LRR   P L   + 
Sbjct: 52  VPADRLL----SHPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVALRR---PHLAASLV 104

Query: 59  RILELIEIQKCYCPEDVAL-----SVIQAYGKNSMPDKALDVFQRMNEIF------GCEA 107
            +L    +     P   AL     +++       + D A+    R+ E+        C  
Sbjct: 105 DLLHRAAL--ALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNH 162

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +L   R  +++ R +  L+E+   P+V+++  VI+ L K G+L  A ++F  M E G  
Sbjct: 163 ILLRLAR--DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL 220

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV +N LIDG+ K G+    +++ E +   +    +VVTYN +IN  CK GR +    
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYG 279

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +  MK+     +  T+ +F+   CK G V  A +++ +M   G+ ++  TY  +IDG C
Sbjct: 280 YFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTC 339

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +AG++ +   L + M R+G  LNVV+Y +L+ GL +  KV EA  +  ++ +    A+  
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  LI+G   N    KA+ +L+E                  M   G +L+     +L+ 
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSE------------------MKNKGLELDISLYGALIQ 441

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G     KL+ A  L  +M   G  P  + Y T+++   K  +  EA + ++++L+ G++P
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++ITY  LI+GLC++  ID A+    +    G  P+V  Y  L+ GLC  G + +A+QL+
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + M  +    + V Y  L+DG  K G+   A  +   +++  L+ D+  Y   + G C+ 
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
           + M +A E  ++ +  GI P    ++ L+
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 284/613 (46%), Gaps = 46/613 (7%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATRE-----PGYAHSPHLFHHILRRLIDPKL----VV 55
           ++R+L+ L A + PH A +L D   R      P  +    +   +L  L D  L    V 
Sbjct: 84  SRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVR 143

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEA 107
            V+R+ EL           + L + +        D++  + +R+ E         F    
Sbjct: 144 AVARVRELRVPPNTRTCNHILLRLAR--------DRSGRLVRRLFEQLPAPNVFTFNIVI 195

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             LC++ +  +A+   + + E G  PDV ++ ++I+G  K G+L     + +EM   G +
Sbjct: 196 DFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCK 255

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV YN LI+ F K G    A   +  +  E  V  NVVT++  ++  CK G   E ++
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ +M+      + FTY   I G CKAG ++ A  +  EMV  G+ ++ VTY  ++DG C
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +  K+ E  ++  +M + G   N + Y  LI G   N   ++A+ +   ++ K    D +
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            +G LI GLC    L++A  +L +++E G                  G++ +A +++ ++
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G + N  T  +L++G  +A  ++ AI  F +M   G  P V +Y  L++GLCK    
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA     EM+ KG   D + Y+ L++G  +   +  A  L  + +  G   D+  Y   
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G C+   + +A +++S M      P+   YN L+    K G+ ++A+ + + +  ER+
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERV 672

Query: 570 RPDIISYNITLKG 582
            P     +    G
Sbjct: 673 LPSCTDSDTATDG 685



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 212/427 (49%), Gaps = 23/427 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V E  V PN  T N ++  L +    D    +  R+ +     + FT+   I  LCK G 
Sbjct: 148 VRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGE 203

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +  A  ++  M E G   D VT+N++IDG+ + G++ E  +L E M R GC  +VV+YN 
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNA 263

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI    + G+++ A   +  ++ +   A+  T    ++  CK G + +A+++  +     
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ----- 318

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G  LN +T   L++G  +A +L++AI L  EM R+G    VV+
Sbjct: 319 -------------MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  L++GLCK  +  EA   ++ M + G + + + Y+ LI+G   +K  + AL L  +  
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG   D+++Y  LI GLC+  K+++A  L + M +    PN + Y T+MD  FK+G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A+ +   IL+   +P++I+Y   + GLC    + +A    N     G+ P    +  LV
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 616 RAVMNNG 622
             +  NG
Sbjct: 546 DGLCKNG 552



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 213/429 (49%), Gaps = 19/429 (4%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R + E    PNV T+N++I+ LCK G   E   ++ RMK+     D  T+ S I G  K 
Sbjct: 177 RRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKC 236

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G ++  E++  EM  SG   D VTYNA+I+ FC+ G+++  +  +  M R+G + NVV++
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           +  +    + G V EA+ ++  +R +    +  T+  LI+G CK                
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK---------------- 340

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              GRL DA  L++ M + G  LN  T   L++G  +  K+  A  + + M + G     
Sbjct: 341 --AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y TLI+G    +   +A   + EM  KG + D+  Y  LI GLC   K+D A  L  +
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G  P+  +Y  ++     +GKV +A+ +   +      PN++TY  L+DGL K G 
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+A+  +N + +  L P++ +Y   + GLC    +++A +  N+ + +G+    + +  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 614 LVRAVMNNG 622
           L+   +  G
Sbjct: 579 LLDGYLKQG 587


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 260/511 (50%), Gaps = 20/511 (3%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVC 172
           R  + A    N +  +   P +  +  +++ +VK G     +    +  E  G+  N+  
Sbjct: 71  RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
            +I ++ F +         +  + V++  + P +VT+  +INGLCK G F + +E++D M
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAK-VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM 189

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                + D +TY + I+GLCK G    A  + ++M E+G   + VTY+ +ID  CR   +
Sbjct: 190 VAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLV 249

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +++  M  KG   ++ +Y  LI+GL +  +  EA ++   +   N   D  T  VL
Sbjct: 250 NEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVL 309

Query: 352 INGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGC 394
           ++  CK G +++A+ +L  + E G                    + +A  L + M   GC
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K N ++ N L+NG+ +A +++ A+ LF EM  +G +P  VSYNTLI+G C++ +  EA  
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             + M   G  PD+ TYS+L++G C+   +  A +L          P++ MY IL+H +C
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            +G  +DA +L+S +  +   P++  Y T+++GL K G  D+ALE + ++  +   PD I
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEI 549

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           SYN+ ++GL      S A   + +   RG +
Sbjct: 550 SYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 249/516 (48%), Gaps = 30/516 (5%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           F+H+L R   P ++     +  ++++ + Y   DV +S+ +      +      +   MN
Sbjct: 80  FNHMLHRKPLPCIIQFAKLLSAIVKMGQYY---DVVISLSKQMELVGLSPNIYTLSIFMN 136

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                     C+ ++ +     L  + + GL+P + ++ T+INGL K G+   A+ +FD+
Sbjct: 137 --------CFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDD 188

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  +G + +V  YN +I+G  K G+   A  + +++  E    PN+VTY+ +I+ LC+  
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM-EEAGCQPNMVTYSTLIDSLCRDR 247

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +E L+++  MK      D FTY S I GLCK    + A  +  EM    I  D VT+N
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++D FC+ GK+ E   + + M   G   NVV+Y+ L+ G      V EA  ++ ++  K
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADA 382
            C  +  ++ +LING CK   +++A+Q+ NE+   G                  G+L +A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L   M  +G   + +T + L++GF +   L  A  LF+ M      P +V Y  L++ 
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           +CK     +A     E+  +G +P +  Y+ +INGLC+   +D AL+        G  PD
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
              YN++I GL        AL L   M+ R  + ++
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 184/359 (51%), Gaps = 19/359 (5%)

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
           ++M   G+  +  T +  ++ FC+  ++   F +   + + G    +V++  LI GL + 
Sbjct: 117 KQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKV 176

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+  +A+ +++ +  K C  D  T+  +INGLCK                   G  A AA
Sbjct: 177 GEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCK------------------IGETAAAA 218

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L+ +M++ GC+ N  T ++L++   +   +  A+ +F  M  KG SP + +Y +LI GL
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGL 278

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK  R+ EA + + EM      PD++T+++L++  C+  K+  AL +     + G  P+V
Sbjct: 279 CKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNV 338

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y+ L++G      V +A +L+  M  + C PN+ +YN L++G  K    D+A++++N 
Sbjct: 339 VTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNE 398

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ + L P+ +SYN  + G C   ++ +A +   +    G LP   T+ IL+      G
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 163/538 (30%), Positives = 274/538 (50%), Gaps = 58/538 (10%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+ Y++  +I  L  SG L  A  +FD+M  RG E N   + IL+ G+ + G   +  
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGL 202

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+  ++     + PN V YN +I+  CK G+  +  ++ D+M+++       T+ S I  
Sbjct: 203 ELLGQM-RTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISA 261

Query: 251 LCKAGNVEGAERVYREMV---ESGI-FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           LC +G +  A R++R+M    E G+   + +TY  M+ GFC+ G ++E   L + M R  
Sbjct: 262 LCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNA 321

Query: 307 -CLNVVSYNILIRGLLENGKVDEAISIWELLREK---NCNADSTTHGVLINGLCKNGYLN 362
             +N+ SYNI + GL+ NGK+ EA   W +L+E        D  ++ ++++GLCKNG L+
Sbjct: 322 NFINLESYNIWLLGLIRNGKLLEA---WIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLS 378

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            A  ++  +   G                 +G++ +A +L++ M  + C  N YTCN L+
Sbjct: 379 DARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLL 438

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW- 464
           +   +  ++  A  L ++M+ KG     V+ N +IN LC   +  +A   V  M   G  
Sbjct: 439 HSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSA 498

Query: 465 ----------------------KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
                                  PD++TYS +I+GLC++ ++D A K   + + KG  PD
Sbjct: 499 ALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPD 558

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
             +Y+  IH  C  GK+  A Q+  +M+KR C   L TYN+L+ GL   G  ++  E++ 
Sbjct: 559 SAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGL---GSKNQIFELYG 615

Query: 563 HILEER---LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            I E R   + PD+ +YN  L  LC   R++DA   L++ L +GI P   ++ IL++A
Sbjct: 616 LIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKA 673



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 262/543 (48%), Gaps = 46/543 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+LC     E A+   + +  +G +P+ +++G ++ G  ++G     L +  +M 
Sbjct: 150 FNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMR 209

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G+  N V YN LI  F K+G    A+++ +++  E  + P+V T+N  I+ LC  G+ 
Sbjct: 210 TMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKM-REDGLVPHVETFNSRISALCGSGKI 268

Query: 223 DECLEMWDRMKKNER----EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            E   ++  M+ +E       +  TY   + G CK G +E A+ +   M  +  F++  +
Sbjct: 269 LEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLES 328

Query: 279 YNAMIDGFCRAGKIKECF-ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN  + G  R GK+ E +  L E++G     ++ SYNI++ GL +NG + +A  +  L+ 
Sbjct: 329 YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMI 388

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
                 D+ T+  L++G C  G + +A  +L+E+                     EGR++
Sbjct: 389 RNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRIS 448

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM---------------- 424
           +A +L+ +M++ G  ++  TCN ++N      +L+ AI +   M                
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508

Query: 425 -------SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                  S K C+P +V+Y+T+I+GLCK  R  +A     EM+ KG +PD   Y   I+ 
Sbjct: 509 GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+  KI  A ++     ++G    +  YN LI GL S  ++ +   L   M+++   P+
Sbjct: 569 FCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPD 628

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + TYN +++ L + G  + A  + + +L++ + P+I S+ I +K  C       + E   
Sbjct: 629 VCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE 688

Query: 598 DAL 600
            AL
Sbjct: 689 IAL 691



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 271/592 (45%), Gaps = 88/592 (14%)

Query: 79  VIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++ Y +  +  K L++  +M        N ++       C++ +   A++ ++ + E G
Sbjct: 188 LVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDG 247

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMF---ERGV-ETNVVCYNILIDGFFKKGDY 186
           L P V ++ + I+ L  SG +L A  +F +M    E G+   NV+ Y +++ GF K+G  
Sbjct: 248 LVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGML 307

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             AK + + +    + + N+ +YN+ + GL + G+  E   +   M     E D ++Y  
Sbjct: 308 EEAKTLVDTM-KRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNI 366

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            + GLCK G +  A  +   M+ +GI  D VTY+ ++ G+C  GK+ E   L   M    
Sbjct: 367 VMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  N  + N+L+  L + G++ EA ++ + + EK    D+ T  ++IN LC NG L+KAI
Sbjct: 427 CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAI 486

Query: 366 QILNEVEEGGE----------------------------------------GRLADAASL 385
           +I+N +   G                                         GRL DA   
Sbjct: 487 EIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKK 546

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M   G + ++   ++ ++ F +  K+ +A  + K+M ++GC+ T+ +YN+LI GL  
Sbjct: 547 FIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGS 606

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  E Y  + EM EKG  PD+ TY+ ++N LC+  +I+ A  +  + LQKG +P+++ 
Sbjct: 607 KNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISS 666

Query: 506 YNILIHGLCSA----------------------------------GKVEDALQLYSNMKK 531
           + ILI   C A                                  GKV +A +L+     
Sbjct: 667 FRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALD 726

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           R+       Y  L+D L K    + A ++ + ++++  + D  S+   + G 
Sbjct: 727 RSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGF 778



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 235/512 (45%), Gaps = 49/512 (9%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVE--TNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           ++  L KSG    A++ F  +     E   ++  YN+L+    ++        +++ +V+
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              V P   T+N++I  LC  G  ++  E++D+M     E + FT+   + G C+AG   
Sbjct: 141 -ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
               +  +M   GI  + V YN +I  FC+ GK  +  +L + M   G + +V ++N  I
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259

Query: 318 RGLLENGKVDEAISIWELLREKN----CNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L  +GK+ EA  I+  ++        + +  T+ +++ G CK                
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCK---------------- 303

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG L +A +LV+ M ++   +N  + N  + G I+  KL  A  + KEM   G  P +
Sbjct: 304 --EGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDI 361

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            SYN +++GLCK     +A   +  M+  G  PD +TYS L++G C   K+  A  L  +
Sbjct: 362 YSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHE 421

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +    +P+    N+L+H L   G++ +A  L   M ++    + VT N +++ L   G 
Sbjct: 422 MISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQ 481

Query: 554 CDKALEI----WNH-------------------ILEERLRPDIISYNITLKGLCSCSRMS 590
            DKA+EI    W H                   I  ++  PD+++Y+  + GLC   R+ 
Sbjct: 482 LDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLD 541

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DA +   + + +G+ P +  +   + +    G
Sbjct: 542 DAKKKFIEMMSKGLQPDSAIYDTFIHSFCREG 573



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 230/508 (45%), Gaps = 63/508 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++   E+AK  ++++       ++ SY   + GL+++G LL A  V  EM   G+E +
Sbjct: 301 FCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPD 360

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YNI++DG  K G    A+ +   L++   + P+ VTY+ +++G C  G+  E   + 
Sbjct: 361 IYSYNIVMDGLCKNGMLSDARMLM-GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLL 419

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  N    +++T    +H L K G +  AE + ++M E G  VD VT N +I+  C  
Sbjct: 420 HEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNN 479

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G++ +  E+   M   G   + +      GL     VD+ IS       K C  D  T+ 
Sbjct: 480 GQLDKAIEIVNGMWTHGSAALGNLGNSFIGL-----VDDTIS------GKKCTPDLVTYS 528

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            +I+GLCK G L+ A +   E+   G                 EG+++ A  ++  M+K 
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC     T NSL+ G    +++     L  EM  KG SP V +YN ++N LC+  R  +A
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQS-------KKIDMALKLCCQ------------ 493
            S + EML+KG  P++ ++ +LI   C++       +  ++AL +C              
Sbjct: 649 PSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNEL 708

Query: 494 ---------------FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
                           L + F     +Y  LI  LC   K+E A  +   +  +    + 
Sbjct: 709 LVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDP 768

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILE 566
            ++  ++DG  K G+   A E+   ++E
Sbjct: 769 ASFMPVIDGFGKMGNKHVADELAERMME 796



 Score = 42.7 bits (99), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L SN  ++   P++  YN L+    +    +    ++  ++  R+ P+  ++N+ +  L
Sbjct: 100 SLRSNFPEKQ--PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLL 157

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           C    + DA E  +    RG  P   T+ ILVR     G ++
Sbjct: 158 CDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 170/659 (25%), Positives = 311/659 (47%), Gaps = 69/659 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+    A  +    L LF    +E GY  + HLF  ++R       V     +L+  E++
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQ-MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD--EMK 230

Query: 68  KCYCPEDVALS--VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKR--- 114
                 D+ L    I ++GK    D A   F  +           +    G+LC+     
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290

Query: 115 --------------------------------QFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
                                           +F++A   L     KG  P V +Y  ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
             L K G +  AL VF+EM ++    N+  YNILID   + G    A E+ + +  +  +
Sbjct: 351 TCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSM-QKAGL 408

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PNV T N+M++ LCK  + DE   ++++M       D  T+CS I GL K G V+ A +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +Y +M++S    +++ Y ++I  F   G+ ++  ++++ M  + C  ++   N  +  + 
Sbjct: 469 IYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF 528

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G+ ++  +++E ++ +    D+ ++ +LI+GL K G+ N+  ++   ++E        
Sbjct: 529 KAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKE-------- 580

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC L+    N +++GF +  K+  A  L +EM  KG  PTVV+Y ++I+
Sbjct: 581 ----------QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL K++R  EAY   +E   K  + +++ YS LI+G  +  +ID A  +  + +QKG TP
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V  +N L+  L  A ++ +AL  + +MK+  C PN VTY  L++GL K    +KA   W
Sbjct: 691 NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
             + ++ ++P  ISY   + GL     +++A    +     G +P +  ++ ++  + N
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 177/711 (24%), Positives = 313/711 (44%), Gaps = 98/711 (13%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L+  K+ + A+  F    R     H P  ++ +L  +   +    + +IL  + + 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
                 +  + ++ +  K +   +  DV Q M +         +    G        +  
Sbjct: 128 GFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                 + E G +P V+ + T+I G  K G +  AL++ DEM    ++ ++V YN+ ID 
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G    A + +   +    + P+ VTY  MI  LCK  R DE +EM++ ++KN R  
Sbjct: 248 FGKVGKVDMAWKFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306

Query: 240 DSFTYCSFIHG-----------------------------------LCKAGNVEGAERVY 264
            ++ Y + I G                                   L K G V+ A RV+
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVF 366

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            EM +     +  TYN +ID  CRAGK+   FEL + M + G   NV + NI++  L ++
Sbjct: 367 EEMKKDAA-PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--------- 374
            K+DEA +I+E +  K C  D  T   LI+GL K G ++ A +I  ++ +          
Sbjct: 426 QKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVY 485

Query: 375 --------GEGRLADAASLVNRMDKHGCK-----LNAY---------------------- 399
                     GR  D   +   M    C      LN Y                      
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKS 545

Query: 400 --------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                   + + L++G I+A        LF  M  +GC     +YN +I+G CK  +  +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           AY  ++EM  KG++P ++TY  +I+GL +  ++D A  L  +   K    +V +Y+ LI 
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G    G++++A  +   + ++   PN+ T+N+L+D L K  + ++AL  +  + E +  P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++Y I + GLC   + + AF F  +   +G+ P+TI++  ++  +   G
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 232/459 (50%), Gaps = 21/459 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A      +  K   PD  ++ ++I+GL K G +  A  ++++M +    TN
Sbjct: 422 LCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN 481

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y  LI  FF  G      +I++ +V + +  P++   N  ++ + K G  ++   M+
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMVNQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + +K      D+ +Y   IHGL KAG       ++  M E G  +D   YN +IDGFC+ 
Sbjct: 541 EEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ + ++L E M  KG    VV+Y  +I GL +  ++DEA  ++E  + K    +   +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  K G +++A  IL E+ +                   G   N YT NSL++  
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQ------------------KGLTPNVYTWNSLLDAL 702

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A ++  A+  F+ M    C+P  V+Y  LINGLCKV +F +A+ F +EM ++G KP  
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL ++  I  A  L  +F   G  PD   YN +I GL +  +  DA  L+  
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            ++R    +  T   L+D L K  DC +   I   +L E
Sbjct: 823 TRRRGLHIHNKTCVVLLDTLHKN-DCLEQAAIVGAVLRE 860


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 261/533 (48%), Gaps = 23/533 (4%)

Query: 112 RKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDL--LGALAVFDEMFERGVET 168
           R R    A + L+SL  +  ++P + +   V++ L +S       +L  F  +    +  
Sbjct: 143 RLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHP 202

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   +N+L+     KG    A      +     + P+ VTYN ++N  C+ G   E   +
Sbjct: 203 NHYTFNLLVHTHCSKGTLADALSTLSTM-QGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             RMKK+       TY + +    + G ++ A +V   M  +G   D  TYN +  G C+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 289 AGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           AGK+ E F L + M R G L  +VV+YN L     +     +A+ + E +REK   A   
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           TH ++I GLCK+G L  A+  LN++ + G                  G +A A +L++ M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G KL+ +T N+++    +  + E A  L +   ++G  P  VSY T++    K    
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A     EM+EK   P + TY+ LI GL +  ++  A+    + ++KG  PD T YNI+
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           IH  C  G +E+A Q ++ M + +  P++VT NTLM+GL   G  DKAL+++   +E+  
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + D+I+YN  ++ +C    +  A  F  D   RG+ P   T+++++ A+   G
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 233/492 (47%), Gaps = 61/492 (12%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYN 174
            ++A + + ++   G +PD+++Y  +  GL ++G +  A  + DEM   G +  +VV YN
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYN 349

Query: 175 ILIDGFFK---KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            L D  FK     D +R  E       E  V   +VT+N++I GLCK G  +  L   ++
Sbjct: 350 TLADACFKCRCSSDALRLLEEMR----EKGVKATLVTHNIVIKGLCKDGELEGALGCLNK 405

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  +    D  TY + IH  CKAGN+  A  +  EMV  G+ +D  T N ++   C+  +
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            +E   L +   ++G + + VSY  ++    +    + A+ +W+ + EK      +T+  
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI GL + G L +AI  LNE+ E G                 EG L +A    N+M ++ 
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            K +  TCN+LMNG     KL+ A+ LF+    KG    V++YNTLI  +CK      A 
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF-------------- 499
            F  +M  +G +PD  TY+++++ L ++ + + A  +  +  + G               
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSS 705

Query: 500 -----------TPDVTM----------YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
                      T + T+          Y  L++GLC++G+ ++A  +   M ++    + 
Sbjct: 706 VDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDS 765

Query: 539 VTYNTLMDGLFK 550
            TY TLM+GL K
Sbjct: 766 STYITLMEGLVK 777



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 200/412 (48%), Gaps = 59/412 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE-- 167
           LC+  + E A   LN + + GL PDV +Y T+I+   K+G++  A  + DEM  RG++  
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 168 ---TNVVCYNI------------------------------LIDGFFKKGDYMRAKEIWE 194
               N V YN+                              ++  +FK+ +   A  +W+
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            ++ E  + P++ TYN +I GL + GR  E ++  + + +     D  TY   IH  CK 
Sbjct: 510 EMI-EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKE 568

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G++E A + + +MVE+    D VT N +++G C  GK+ +  +L+E    KG  ++V++Y
Sbjct: 569 GDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITY 628

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI+ + ++G VD A+  +  +  +    D+ T+ V+++ L + G   +A  +L+++ E
Sbjct: 629 NTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688

Query: 374 GGEGRLADAASLV--NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
            G    + ++ L+  + +D+     +A T         +   +EN      E        
Sbjct: 689 SGTLSQSFSSPLLKPSSVDEAESGKDAKT---------EEETVENPQDSASE-------- 731

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
              +Y  L+NGLC   +F EA + + EM++KG   D  TY  L+ GL + +K
Sbjct: 732 ---AYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 292/605 (48%), Gaps = 62/605 (10%)

Query: 79  VIQAYGKNSMPDKALDVF------QRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKG 130
           +I +Y +  M D+A +VF        +  +  C + +  L +    E   +  N + +  
Sbjct: 164 LIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAK 223

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +  DVY+Y  ++  L K+GDL GA  V  EM E+G+  N   Y+++I+G  + GD   A 
Sbjct: 224 MGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAV 283

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+ +R + E  + PN  TY ++  GLC+  R +E    ++ M+K   + D     + I G
Sbjct: 284 EL-KRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 342

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
             + G+++   R+   MV  GI ++ +TYN +I G C+ GK+++  E+ + M   GC  N
Sbjct: 343 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPN 402

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
             ++ +LI G      +  A+ + + + ++N    + ++G +INGLC    L+ A ++L 
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           ++   G                 EGR+ +A  L++ M   G   + +  N++++   +A 
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K+E A     E+  +G  P  V++   I G  K  +  EA  +  EML+ G  P+   Y+
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582

Query: 473 LLIN-----------------------------------GLCQSKKIDMALKLCCQFLQK 497
           +LIN                                   GL ++ ++  ALK+  +  +K
Sbjct: 583 VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  PDV  Y+ LI G C  G+VE A +L+  M  +   PN+  YN L+DGL K+GD  +A
Sbjct: 643 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++++ + E+ L PD ++Y+  + G C    +++AF   ++   +G+ P +  ++ LV  
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762

Query: 618 VMNNG 622
               G
Sbjct: 763 CCKEG 767



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/530 (30%), Positives = 262/530 (49%), Gaps = 27/530 (5%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMN------EIFGCEAGILCRKR--QFEKAKRF 122
           P  V  S+ I AY      ++A  +   M+      +IF   A I C  +  + E+A  +
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  +  +GLKPD  ++G  I G  K+G +  A   FDEM + G+  N   Y +LI+G FK
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+ M A  I+ RL     V P+V T +  I+GL K GR  E L+++  +K+     D F
Sbjct: 591 AGNLMEALSIFRRL-HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I G CK G VE A  ++ EM   GI  +   YNA++DG C++G I+   +L++ M
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG   + V+Y+ +I G  ++  V EA S++  +  K     S  +  L++G CK G +
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 362 NKAIQILNEVEEGGEG----------------RLADAASLVNRMDKHGCKLNAYTCNSLM 405
            KA+ +  E+ + G                  ++ +A+ L   M       +  T  +++
Sbjct: 770 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +   +A K+E A  LFKEM  +      V+Y +L+ G  K+ +  E ++  ++M+ KG K
Sbjct: 830 DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 889

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD +TY L+I   C+   +  A KL  + + KG     T++++LI  LC    + +A +L
Sbjct: 890 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
              M +    P+L   NTL+    + G  D+A  ++  +    L PD  +
Sbjct: 950 LDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 260/517 (50%), Gaps = 21/517 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + EKA   L  +   G KP+  ++  +I G  +  ++  AL + DEM +R +  +
Sbjct: 378 LCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPS 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  +I+G     D   A ++ E++   + + PNVV Y+++I      GR +E   + 
Sbjct: 438 AVSYGAMINGLCHCKDLSLANKLLEKMTF-SGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M  +    D F Y + I  L KAG +E A     E+   G+  DAVT+ A I G+ + 
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  + ++ M   G + N   Y +LI G  + G + EA+SI+  L       D  T 
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
              I+GL KNG + +A+++ +E++E G         LV          + +T +SL++GF
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKG---------LVP---------DVFTYSSLISGF 658

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  ++E A  L  EM  KG +P +  YN L++GLCK      A      M EKG +PD 
Sbjct: 659 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 718

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TYS +I+G C+S+ +  A  L  +   KG  P   +YN L+HG C  G +E A+ L+  
Sbjct: 719 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 778

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M ++     L ++NTL+DG  K+    +A +++  ++ +++ PD ++Y   +   C   +
Sbjct: 779 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           M +A     +   R ++  T+T+  L+      G S+
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 221/448 (49%), Gaps = 19/448 (4%)

Query: 118  KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            +A      L   G+ PDV +    I+GL+K+G +  AL VF E+ E+G+  +V  Y+ LI
Sbjct: 596  EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 178  DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
             GF K+G+  +A E+ + + ++  + PN+  YN +++GLCK G      +++D M +   
Sbjct: 656  SGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 238  EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
            E DS TY + I G CK+ NV  A  ++ EM   G+   +  YNA++ G C+ G +++   
Sbjct: 715  EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 298  LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            L+  M +KG    +S+N LI G  ++ K+ EA  +++ +  K    D  T+  +I+  CK
Sbjct: 775  LFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834

Query: 358  NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               G++ +A  L   M +    ++  T  SLM G+ +  +    
Sbjct: 835  ------------------AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 876

Query: 418  IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
              LF++M  KG  P  V+Y  +I   CK +   EA+    E++ KG       + LLI  
Sbjct: 877  FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 936

Query: 478  LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            LC+ + +  A KL  +  + G  P +   N L+     AGK+++A +++  +K    VP+
Sbjct: 937  LCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996

Query: 538  LVTYNTLMDGLFKTGDCDKALEIWNHIL 565
              T   L++G     D + A  +   ++
Sbjct: 997  TTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 220/456 (48%), Gaps = 20/456 (4%)

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           ++ V ++ILID + + G    A  ++  +    S+  +++  N ++  L KCG  +   +
Sbjct: 156 SSPVVFDILIDSYKRMGMLDEAANVF-FVAKNDSILISLIRCNSLLKDLLKCGMMELFWK 214

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +++ M   +   D +TY   +  LCK G++ GA+RV  EM E G+  +   Y+ +I+G C
Sbjct: 215 VYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMC 274

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G I E  EL   MG KG + N  +Y I+  GL    +++EA   +E +++     D  
Sbjct: 275 QVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 334

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
               LI+G  + G +++ ++I                   + M   G  +N  T N L++
Sbjct: 335 ACSALIDGFMREGDIDEVLRI------------------KDVMVSCGIPINLITYNVLIH 376

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +  K+E A  + K M   GC P   ++  LI G C+    G A   + EM ++   P
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
             ++Y  +INGLC  K + +A KL  +    G  P+V +Y+ILI    S G++E+A +L 
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M      P++  YN ++  L K G  ++A      I    L+PD +++   + G    
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +M++A ++ ++ L  G++P    + +L+      G
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 592



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 212/431 (49%), Gaps = 63/431 (14%)

Query: 91   KALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            +AL +F+R++      ++  C A I  L +  + ++A +  + L EKGL PDV++Y ++I
Sbjct: 596  EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 143  NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            +G  K G++  A  + DEM  +G+  N+  YN L+DG  K GD  RA+++++ +  E  +
Sbjct: 656  SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGL 714

Query: 203  YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
             P+ VTY+ MI+G CK     E   ++  M     +  SF Y + +HG CK G++E A  
Sbjct: 715  EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 263  VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW----------------------- 299
            ++REM++ G F   +++N +IDG+C++ KI+E  +L+                       
Sbjct: 775  LFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833

Query: 300  -------------EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
                         E+  R   ++ V+Y  L+ G  + G+  E  +++E +  K    D  
Sbjct: 834  KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            T+G++I   CK   L +A ++ +EV   G                    L +A+ L++ M
Sbjct: 894  TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 390  DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
             + G K +   CN+L+  F +A K++ A  +F+ +   G  P   +   L+NG       
Sbjct: 954  GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 1013

Query: 450  GEAYSFVKEML 460
             +A + +K+++
Sbjct: 1014 EDARNLIKQLV 1024


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/641 (26%), Positives = 306/641 (47%), Gaps = 74/641 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSA-TREPGYAHSPHL---------FHHILRRLIDP 51
           ++S+K L++       P+  ++ F  A T  P + H+            F H  R+  D 
Sbjct: 56  ILSSKTLIS------RPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSH--RKFSDA 107

Query: 52  KLV----VHVSRILEL-IEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
           K +    +   R  +L + I +   P    L + I AY ++  P  A  +F++M  +   
Sbjct: 108 KSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL--- 164

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK---SGDLLGALAVFDEMF 162
                                    L+P++ +  T++N LV+   S  +  +   F++  
Sbjct: 165 ------------------------RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAI 200

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G+  NV  +NI+I G+  +  +  A E    ++ + +  P+ VTYN +++ LCK GR 
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFL-NVMGKYNCSPDNVTYNTILDTLCKKGRL 259

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            +  ++   MK      +  TY   ++G CK G ++ A  V   M ++ +  D  TYN +
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G C  G+I+E F+L + M     L +VVSYN LI G LE  K+ EA  + E + EK  
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             ++ TH +++   CK                  EG++ DA++ + +M++ G   +  T 
Sbjct: 380 KPNAVTHNIMVKWYCK------------------EGKMDDASNTITKMEESGFSPDCVTY 421

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L+NG+ +A  +  A     EM RK      V+ NT++  LC+ ++  EAY  +    +
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G+  D ++Y  LI G  +   +D ALKL  +  +K   P    YN +I GLC  GK E 
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A+   + + +   +P+  TYNT++ G  + GD +KA +  N ++E   +PD+ + NI L+
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           GLC    +  A +  N  + +G    T+T++ L+ ++   G
Sbjct: 602 GLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 239/481 (49%), Gaps = 42/481 (8%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    ++A   +  + +  L PDV++Y  +INGL   G +  A  + DEM    +  +V
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LI+G  +      A ++ E +  E  V PN VT+N+M+   CK G+ D+      
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++    D  TY + I+G CKAGN+  A R   EM    + +D+VT N ++   CR  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K++E ++L     ++G  ++ VSY  LI G  ++G VD A+ +W+ ++EK     + T+ 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            +I GLC+ G   +AI  LNE+ E G                 EG +  A    N+M ++
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
             K + +TCN L+ G      LE A+ LF     KG +   V+YNTLI  LCK  R  +A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM------- 505
           ++ + EM EK   PD  TY+ +I  L  S +I  A +   + L+KG  PD  +       
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNET 707

Query: 506 ----------------YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                           Y+  I  LC+ GK +DA++++   K++    +  TY  LMDGL 
Sbjct: 708 VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLI 767

Query: 550 K 550
           K
Sbjct: 768 K 768



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 263/553 (47%), Gaps = 78/553 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + +F+ A  FLN + +    PD  +Y T+++ L K G L  A  +  +M  RG+  N 
Sbjct: 219 CLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR 278

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+ G+ K G    A  + E L+ + ++ P+V TYN++INGLC  GR +E  ++ D
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIE-LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRD 337

Query: 231 RMKKNEREKDSFTYCSFIHG-----------------------------------LCKAG 255
            M+  +   D  +Y + I+G                                    CK G
Sbjct: 338 EMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            ++ A     +M ESG   D VTYN +I+G+C+AG + E F   + MGRK   ++ V+ N
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++R L    K++EA  +    R++    D  ++G LI G  K+G +++A+++ +E++E 
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE- 516

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                                 +  T N ++ G  Q  K E AI    E+   G  P   
Sbjct: 517 -----------------KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNT+++G C+     +A+ F  +M+E  +KPD+ T ++L+ GLC    ++ ALKL   +
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW 619

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + KG   D   YN LI  LC  G+++DA  L S M+++   P+  TYN ++  L  +G  
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 555 DKALEIWNHILEERLRPD-----------------------IISYNITLKGLCSCSRMSD 591
            +A E  + +LE+   PD                        ++Y+  +K LC+  +  D
Sbjct: 680 REAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739

Query: 592 AFEFLNDALCRGI 604
           A     ++  +GI
Sbjct: 740 AMRIFGESKQKGI 752



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 209/450 (46%), Gaps = 42/450 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + E+A +  + +    L PDV SY T+ING ++   +  A  + +EM E+GV+ N
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +NI++  + K+G    A     ++  E+   P+ VTYN +ING CK G   E     
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKM-EESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +   + DS T  + +  LC+   +E A ++     + G F+D V+Y  +I G+ + 
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    +LW+ M  K  + + V+YN +I GL + GK ++AIS    L E     D TT+
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +++G C+ G + KA Q  N++ E                   EG L  A  L N    
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVS 621

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  ++  T N+L+    +  +L++A  L  EM  K   P   +YN +I  L    R  E
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE 681

Query: 452 AYSFVKEMLEKGWKPDMI-----------------------TYSLLINGLCQSKKIDMAL 488
           A  F+ +MLEKG  PD +                        YS  I  LC   K   A+
Sbjct: 682 AEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ++  +  QKG T D + Y  L+ GL    K
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 240/472 (50%), Gaps = 20/472 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  ++ ++  FL  + +KG  PDV     +I G   S ++  A  V  E+ ER  + +V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDV 138

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI GF K      A  + +R+       P+VVTYN+MI   C  G+ D  LE+++
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRM-KSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFE 197

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            + K+  E    TY   I      G ++ A ++  EM+  G+  D +TYNA+I G C+  
Sbjct: 198 ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEM 257

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + + FEL   +  +GC  ++++YNIL+R LL  GK  E   +   +    C  +  TH 
Sbjct: 258 MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHS 317

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI  LC++G + +A+ +L  ++E G                 EGRL  A   +  M   
Sbjct: 318 ILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N++M G  +  K + A+ +F+++   GC P V SYNTL + L        A
Sbjct: 378 GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRA 437

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + ++L +G  PD ITY+ LI+ LC+   +D A++L        + P+V  YNI++ G
Sbjct: 438 LEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLG 497

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           LC   +  DA+++ + M ++ C PN  TY  L++G+  +G   +A+E+ N +
Sbjct: 498 LCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 219/440 (49%), Gaps = 25/440 (5%)

Query: 204 PNVVTYNVMINGLCKC---GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           P+V+    +I G       G+    +E+ +R  K     D F Y + I G  KA  +E A
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVMEILERYGK----PDVFAYNALISGFIKANQLENA 157

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            RV   M   G   D VTYN MI  FC  GK+    E++E + +  C   V++Y ILI  
Sbjct: 158 NRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEA 217

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
            + +G +D A+ + + +  K    D+ T+  +I G+CK   ++KA ++L  +   G    
Sbjct: 218 TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPD 277

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G+ ++   L++ M   GCK N  T + L+    +  K+E A+ L +
Sbjct: 278 IITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLR 337

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M  KG  P    Y+ LI G C+  R   A  F++ M+  G  PD++ Y+ ++ GLC++ 
Sbjct: 338 SMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTG 397

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K D AL++  +  + G  P+V+ YN L   L S+G    AL++   +  +   P+ +TYN
Sbjct: 398 KADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYN 457

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L+  L + G  D+A+E+   +   R RP+++SYNI L GLC  +R +DA E L     +
Sbjct: 458 SLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517

Query: 603 GILPTTITWHILVRAVMNNG 622
           G  P   T+ +L+  +  +G
Sbjct: 518 GCQPNETTYILLIEGIGFSG 537



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 20/412 (4%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N  C+ G+++E L   + M       D       I G   + N+  A RV  E++E  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              D   YNA+I GF +A +++    + + M  +G L +VV+YNI+I      GK+D A+
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            I+E L + NC     T+ +LI     +G ++ A+++L+E                  M 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDE------------------ML 235

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G + +  T N+++ G  +   ++ A  L + +S +GC P +++YN L+  L    ++ 
Sbjct: 236 SKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWS 295

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           E    + EM+  G KP+++T+S+LI  LC+  K++ A+ L     +KG  PD   Y+ LI
Sbjct: 296 EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C  G+++ A +    M    C+P++V YNT+M GL +TG  D+ALE++  + E    
Sbjct: 356 AGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP 415

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P++ SYN     L S      A E +   L +GI P  IT++ L+  +  +G
Sbjct: 416 PNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDG 467



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 217/459 (47%), Gaps = 33/459 (7%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNSM 88
           + GY     L   +++   + + +   +R++E++E    Y   DV    ++I  + K + 
Sbjct: 97  DKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILER---YGKPDVFAYNALISGFIKANQ 153

Query: 89  PDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            + A  V  RM           +    G  C + + + A      L +   +P V +Y  
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I   +  G +  A+ + DEM  +G+E + + YN +I G  K+    +A E+  R +   
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELL-RSLSSR 272

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              P+++TYN+++  L   G++ E  ++   M     + +  T+   I  LC+ G VE A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
             + R M E G+  DA  Y+ +I GFCR G++    E  E M   GCL ++V+YN ++ G
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L   GK D+A+ ++E L E  C  + +++  L + L  +G   +A++             
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE------------- 439

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                ++ ++   G   +  T NSL++   +   ++ AI L  +M      P VVSYN +
Sbjct: 440 -----MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNII 494

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           + GLCKV R  +A   +  M EKG +P+  TY LLI G+
Sbjct: 495 LLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 2/240 (0%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LCR  + E+A   L S+ EKGLKPD Y Y  +I G  + G L  A    + M   G  
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            ++V YN ++ G  + G   +A E++E+L  E    PNV +YN + + L   G     LE
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLD-EVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M  ++     + D  TY S I  LC+ G V+ A  +  +M       + V+YN ++ G C
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +  +  +  E+   M  KGC  N  +Y +LI G+  +G   EA+ +   L   N  ++ +
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 1/207 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ + + A  FL  +   G  PD+ +Y T++ GL ++G    AL VF+++ E G   N
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN L    +  GD  RA E+  +L +   + P+ +TYN +I+ LC+ G  DE +E+ 
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKL-LNQGIDPDEITYNSLISCLCRDGMVDEAIELL 476

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      +  +Y   + GLCK      A  V   M E G   +  TY  +I+G   +
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFS 536

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNIL 316
           G   E  EL   +     ++  S+N L
Sbjct: 537 GLRAEAMELANSLHGMNAISEDSFNRL 563


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 174/629 (27%), Positives = 304/629 (48%), Gaps = 46/629 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSA--TREPGYAHSPHLFHHI--LRRLIDPKLVVHVS 58
           + A RLL    +   P TA A   +    R+  YAHS  +   +  LRR   P L   + 
Sbjct: 52  VPADRLL----SHPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVALRR---PHLAASLV 104

Query: 59  RILELIEIQKCYCPEDVAL-----SVIQAYGKNSMPDKALDVFQRMNEIF------GCEA 107
            +L    +     P   AL     +++       + D A+    R+ E+        C  
Sbjct: 105 DLLHRAALA--LGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNH 162

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +L   R  +++ R +  L+E+   P+V+++  VI+ L K G+L  A ++F  M E G  
Sbjct: 163 ILLRLAR--DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL 220

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV +N LIDG+ K G+    +++ E +   +    +VVTYN +IN  CK GR +    
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYG 279

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +  MK+     +  T+ +F+   CK G V  A +++ +M   G+ ++  TY  +IDG C
Sbjct: 280 YFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTC 339

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +AG++ +   L + M R+G  LNVV+Y +L+ GL +  KV EA  +  ++ +    A+  
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  LI+G   N    KA+ +L+E                  M   G +L+     +L+ 
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSE------------------MKNKGLELDISLYGALIQ 441

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G     KL+ A  L  +M   G  P  + Y T+++   K  +  EA + ++++L+ G++P
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++ITY  LI+GLC++  ID A+    +    G  P+V  Y  L+ GLC  G + +A+QL+
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + M  +    + V Y  L+DG  K G+   A  +   +++  L+ D+  Y   + G C+ 
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
           + M +A E  ++ +  GI P    ++ L+
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 282/602 (46%), Gaps = 46/602 (7%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATRE-----PGYAHSPHLFHHILRRLIDPKL----VV 55
           ++R+L+ L A + PH A +L D   R      P  +    +   +L  L D  L    V 
Sbjct: 84  SRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVR 143

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEA 107
            V+R+ EL           + L + +        D++  + +R+ E         F    
Sbjct: 144 AVARVRELRVPPNTRTCNHILLRLAR--------DRSGRLVRRLFEQLPAPNVFTFNIVI 195

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             LC++ +  +A+   + + E G  PDV ++ ++I+G  K G+L     + +EM   G +
Sbjct: 196 DFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCK 255

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV YN LI+ F K G    A   +  +  E  V  NVVT++  ++  CK G   E ++
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ +M+      + FTY   I G CKAG ++ A  +  EMV  G+ ++ VTY  ++DG C
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +  K+ E  ++  +M + G   N + Y  LI G   N   ++A+ +   ++ K    D +
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            +G LI GLC    L++A  +L +++E G                  G++ +A +++ ++
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G + N  T  +L++G  +A  ++ AI  F +M   G  P V +Y  L++GLCK    
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA     EM+ KG   D + Y+ L++G  +   +  A  L  + +  G   D+  Y   
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G C+   + +A +++S M      P+   YN L+    K G+ ++A+ + + +  ER+
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERV 672

Query: 570 RP 571
            P
Sbjct: 673 LP 674



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 212/427 (49%), Gaps = 23/427 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V E  V PN  T N ++  L +    D    +  R+ +     + FT+   I  LCK G 
Sbjct: 148 VRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGE 203

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +  A  ++  M E G   D VT+N++IDG+ + G++ E  +L E M R GC  +VV+YN 
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNA 263

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI    + G+++ A   +  ++ +   A+  T    ++  CK G + +A+++  +     
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ----- 318

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G  LN +T   L++G  +A +L++AI L  EM R+G    VV+
Sbjct: 319 -------------MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  L++GLCK  +  EA   ++ M + G + + + Y+ LI+G   +K  + AL L  +  
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG   D+++Y  LI GLC+  K+++A  L + M +    PN + Y T+MD  FK+G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A+ +   IL+   +P++I+Y   + GLC    + +A    N     G+ P    +  LV
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 616 RAVMNNG 622
             +  NG
Sbjct: 546 DGLCKNG 552



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 213/429 (49%), Gaps = 19/429 (4%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R + E    PNV T+N++I+ LCK G   E   ++ RMK+     D  T+ S I G  K 
Sbjct: 177 RRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKC 236

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G ++  E++  EM  SG   D VTYNA+I+ FC+ G+++  +  +  M R+G + NVV++
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           +  +    + G V EA+ ++  +R +    +  T+  LI+G CK                
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK---------------- 340

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              GRL DA  L++ M + G  LN  T   L++G  +  K+  A  + + M + G     
Sbjct: 341 --AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y TLI+G    +   +A   + EM  KG + D+  Y  LI GLC   K+D A  L  +
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G  P+  +Y  ++     +GKV +A+ +   +      PN++TY  L+DGL K G 
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+A+  +N + +  L P++ +Y   + GLC    +++A +  N+ + +G+    + +  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 614 LVRAVMNNG 622
           L+   +  G
Sbjct: 579 LLDGYLKQG 587


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 262/522 (50%), Gaps = 22/522 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETN 169
           C  R  + A    N +  +   P +  +  +++ +VK G     +    +  E  G+  N
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +   +ILI+ F        A  +  +++ +  + P +VT+  +IN LCK G+F + +E++
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKII-KLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       D +TY + I+GLCK G    A  + ++M E+G   + VTY+ +ID   + 
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  +++  M  KG   ++ +YN LI+GL    +  EA ++   +R  N   D  T 
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            VL++ +CK G +++A  +L  + E G                    + +A  L + M  
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GCK + ++ N L+NG+ +  +++ A  LF EM  +G +P  VSYNTLI+GLC++    E
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A +  K M   G  P++ TYS+L++G C+      A +L          P++ MYNILI 
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            +C +G + DA +L+S +  +   PN   Y T+++GL K G  D+ALE + ++ E+   P
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 551

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT--TITW 611
           D ISYN+ ++G       S A + + +   +G +    T  W
Sbjct: 552 DEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTAW 593



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 224/470 (47%), Gaps = 19/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           ALA F+ M  R     ++ +  L+    K G Y        + +    + PN+ T +++I
Sbjct: 81  ALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILI 140

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N      R D    +  ++ K   +    T+ + I+ LCK G    A  ++ +MV  G  
Sbjct: 141 NCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR 200

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D  TY  +I+G C+ G+      L + M   GC  NVV+Y+ +I    ++ +V+EA+ I
Sbjct: 201 PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI 260

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  ++ K  + D  T+  LI GLC                     +  +A++L+N M   
Sbjct: 261 FSYMKVKGISPDIFTYNSLIQGLC------------------NFSQWKEASALLNEMRSL 302

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               +  T N L++   +  K+  A  + K M+  G  P VV+Y++L+ G        EA
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M+ KG KPD+ +Y++LING C+ K+ID A +L  + + +G TP+   YN LIHG
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G + +A  L+ NM     +PNL TY+ L+DG  K G   KA  ++  +     +P+
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ YNI +  +C    + DA +  ++   +G+ P    +  ++  +   G
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG 532



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 182/395 (46%), Gaps = 29/395 (7%)

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           R ++++R+ D    CSF        N++ A   +  M+        + +  ++    + G
Sbjct: 61  RNRRDKRKHDD--ACSF-------RNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMG 111

Query: 291 KIKEC-FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           +  +    L + M   G   N+ + +ILI       +VD A S+   + +        T 
Sbjct: 112 QYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTF 171

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LIN LCK                   G+ A A  L + M   GC+ + YT  +++NG 
Sbjct: 172 TTLINWLCK------------------VGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +   A  L K+M   GC P VV+Y+T+I+   K  R  EA      M  KG  PD+
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ LI GLC   +   A  L  +       PD+  +N+L+  +C  GKV +A  +   
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    P++VTY++LM G     +  +A ++++ ++ +  +PD+ SYNI + G C   R
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +A +  N+ + +G+ P  ++++ L+  +   G+
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 255/503 (50%), Gaps = 32/503 (6%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L+ + ++GL PD     T++  L  + D   A+A+FD+M E G   +   YN LI    
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLC 91

Query: 182 KKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           K    +  + +   L M++  + P  + +NV+I GLC+ GR    L ++ +M  +    D
Sbjct: 92  KA--RLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPD 148

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   +HGL KAG +  A +V +EMV +    D  T   ++   C   ++ +  EL E
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208

Query: 301 VMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW--ELLREKNCNADSTTHGVLINGLCK 357
            M  +G   N ++Y+ L+ GL +  ++DEA+++   E+ R +    D  T+  +I+GLCK
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTR-RGFTPDIVTYSTVIDGLCK 267

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G L  A+ I  E+                      C   A T NSL+ G+ +A  ++ A
Sbjct: 268 AGRLRDAVDIFEEMS---------------------CAPTAITYNSLIGGYCRAGDMDEA 306

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           I L  +M    C+P V++Y TL++  CK+ R  +AY   ++M+     PD++T++ L++G
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC   +++ AL+L  +  ++G  P +  YN ++ G C + +V  A +L ++ + R  VPN
Sbjct: 367 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPN 426

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEE--RLRPDIISYNITLKGLCSCSRMSDAFEF 595
            VTYN L+ G  + G  D+AL+  + +  E       +  Y I L  LC   R  DA +F
Sbjct: 427 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 486

Query: 596 LNDALCRGILPTTITWHILVRAV 618
             + + RG +P   T+  +V A+
Sbjct: 487 YEEMIQRGYVPAAATFATVVFAL 509



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 275/580 (47%), Gaps = 35/580 (6%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ-KCYCPEDVALSVIQAYGKNSM- 88
           + GY      F  +LR L     + H+  +L L EI+ +   P+ V L+ I A   ++  
Sbjct: 3   DAGYPSDSSTFAVVLRGLHASAKLRHLGPLL-LDEIRDRGLSPDPVELNTILAELCDARD 61

Query: 89  PDKALDVFQRMNEIFGCEAGI-------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
              A+ +F +M E+              LC+ R  ++A   L  +  +G+ P    +  V
Sbjct: 62  TTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVV 121

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I GL ++G L  AL V+ +M +     + + Y  L+ G  K G    A ++ + +V    
Sbjct: 122 IGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EGA 260
           V P+  T  V++  LC   R D+  E+ + M       ++ TY + + GLCK   + E  
Sbjct: 181 V-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGL 320
             +  E+   G   D VTY+ +IDG C+AG++++  +++E M        ++YN LI G 
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM--SCAPTAITYNSLIGGY 297

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G +DEAI +   + + NC  D  T+  L++  CK G                  RL 
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMG------------------RLD 339

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  L  +M  +    +  T  SL++G     ++E+A+ L +E++R+GC PT+ +YN ++
Sbjct: 340 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 399

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  +A   V +   +G+ P+ +TY++L+ G C++ + D AL+   Q   +G  
Sbjct: 400 DGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 459

Query: 501 --PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
               V MY I++  LC  G+ +DA+Q Y  M +R  VP   T+ T++  L K     +A 
Sbjct: 460 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAH 519

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           E+   +++    P   + +  +   C    +  A E  ++
Sbjct: 520 ELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 559



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 258/502 (51%), Gaps = 29/502 (5%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDL--LGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + + G   D  ++  V+ GL  S  L  LG L + DE+ +RG+  + V  N ++      
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPL-LLDEIRDRGLSPDPVELNTILAELCDA 59

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
            D   A  +++++    +V  N  TY  +I+ LCK    DE + +   MK       +  
Sbjct: 60  RDTTTAMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLL 117

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVM 302
           +   I GLC+AG +  A  VYR+M ++    D +TY  ++ G  +AG++++  + L E++
Sbjct: 118 HNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             +   +  +  ++++ L    +VD+A  + E +  +   A++ T+  L++GLCK   L+
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A+                 A L+  + + G   +  T +++++G  +A +L +A+ +F+
Sbjct: 237 EAV-----------------ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EMS   C+PT ++YN+LI G C+     EA   + +M++    PD+ITY+ L++  C+  
Sbjct: 280 EMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMG 336

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++D A +L  Q +    +PDV  +  L+ GLC  G++EDAL+L   + +R C P + TYN
Sbjct: 337 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 396

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            ++DG  K+    KA E+          P+ ++YNI + G C   R   A ++L+     
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 456

Query: 603 -GILPTTIT-WHILVRAVMNNG 622
            G  PT++  + I++ A+  +G
Sbjct: 457 GGPCPTSVAMYAIILDALCRDG 478


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 261/498 (52%), Gaps = 20/498 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + +K +  +V++Y ++I  LVK      +  V +EM   G   +V  +N ++ GF +  +
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A+E+++ +V E+   P+ V+Y+++I+GL K G+ DE L++   M    +      Y 
Sbjct: 61  MEKAREVYQHMV-ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S +  L KA  V+ A  ++ EM+  G   D + +  +I G C+AGK+K+  E ++ M + 
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           GC  NV  YN+L+ GL  +G++++A +++  ++  +C+ D  T+  L++ +CK   + + 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            ++   +   G                  G L  A  +   M + GCK N YT  +L++G
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE-KGWKP 466
             +A K+  A  LF++M++    P  V+YN+LI G CK     EA    +EM    G +P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            ++T++ LI+G C+  K+  A +L  +   KG   D   Y ILI GL  A K+++AL++Y
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M+++  + + V+  + + GL KTG+ D+A  ++    +    P+  ++ I  + L   
Sbjct: 420 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 479

Query: 587 SRMSDAFEFLNDALCRGI 604
            R+ DA + +  A  R I
Sbjct: 480 GRVEDAQKLMEPAKARDI 497



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 247/495 (49%), Gaps = 31/495 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKRFLNSLWE 128
           S+I++  K + P+++  V + M    GC   +           R    EKA+     + E
Sbjct: 15  SIIKSLVKEAKPEESYKVLEEMMAA-GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE 73

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G KPD  SY  +I+GL K G L  +L +  EM  RG   ++  Y+ L+    K      
Sbjct: 74  SGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDH 133

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +++ ++     +P+ + +  +I GLC+ G+  +  E + +M K+  + +   Y   +
Sbjct: 134 ASSLFDEMI-RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLC +G +E A  ++ EM       D VTYN ++D  C+A +++E  +L+E M   G +
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV++++ LI GL   G++++A+ ++  + E  C  +  T+  LI+GLC+     K IQ 
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA---EKVIQ- 308

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR- 426
                         A  L  +M +     +A   NSL+ G+ +   ++ A  L++EMS  
Sbjct: 309 --------------ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  PT+V++NTLI+G CK+ + G A   V EM  KG   D  TY +LI GL ++ K+D 
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL++  Q  +K F  D       + GLC  G ++ A  ++   +K   VPN  T+  L +
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 547 GLFKTGDCDKALEIW 561
            L K G  + A ++ 
Sbjct: 475 SLIKLGRVEDAQKLM 489



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 195/376 (51%), Gaps = 20/376 (5%)

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           FTY S I  L K    E + +V  EM+ +G   D   +N ++ GF R+  +++  E+++ 
Sbjct: 11  FTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQH 70

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G   + VSY+ILI GL + GK+DE++ I   +  +        +  L+  L K   
Sbjct: 71  MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           ++ A  + +E+  GG                H  +L  Y    L+ G  QA K+++A   
Sbjct: 131 VDHASSLFDEMIRGGH---------------HPDRLMFY---ELILGLCQAGKVKDASER 172

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           FK+M + GC P V  YN L++GLC   +  +A +   EM      PD++TY+ L++ +C+
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +++++   KL       G+ P+V  ++ LIHGLC  G++E AL+++ +M +  C PN  T
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND-A 599
           Y TL+ GL +     +A E++  + +  + PD ++YN  + G C    M +A +   + +
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352

Query: 600 LCRGILPTTITWHILV 615
              G+ PT +T++ L+
Sbjct: 353 GGAGLQPTIVTFNTLI 368



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 157/307 (51%), Gaps = 18/307 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +Y+ +I+ L++  K +E+  + E +    CN D      ++ G  ++  + KA ++ 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             + E G                   K +  + + L++G  +  KL+ ++ +  EM  +G
Sbjct: 69  QHMVESG------------------YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRG 110

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +P++ +Y++L+  L K  R   A S   EM+  G  PD + +  LI GLCQ+ K+  A 
Sbjct: 111 QTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDAS 170

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +   Q  + G  P+V +YN+L+HGLCS+G++E A  L++ MK  +C P++VTYNTL+D +
Sbjct: 171 ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAV 230

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K    ++  +++  +      P++I+++  + GLC    +  A E     L  G  P  
Sbjct: 231 CKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 290

Query: 609 ITWHILV 615
            T+  L+
Sbjct: 291 YTYTTLI 297



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 18/287 (6%)

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +R+KN  A+  T+  +I  L K     ++ ++L E                  M   GC 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEE------------------MMAAGCN 42

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            + +  N +M GF +++ +E A  +++ M   G  P  VSY+ LI+GL K+ +  E+   
Sbjct: 43  PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI 102

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + EM+ +G  P M  YS L+  L +++++D A  L  + ++ G  PD  M+  LI GLC 
Sbjct: 103 LSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           AGKV+DA + +  M K  C PN+  YN L+ GL  +G  ++A  ++  +      PD+++
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           YN  L  +C   R+ +  +        G +P  IT+  L+  +   G
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 127/236 (53%), Gaps = 1/236 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + EKA     S+ E G KP+ Y+Y T+I+GL ++  ++ A  +F++M +  +  +
Sbjct: 265 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI G+ K+G    A++++  +     + P +VT+N +I+G CK G+     E+ 
Sbjct: 325 AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 384

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       DS TY   I GL +A  ++ A  VY++M E    +D V+  + + G C+ 
Sbjct: 385 AEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 444

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           G I + + ++E   + G + N  ++ IL   L++ G+V++A  + E  + ++  A 
Sbjct: 445 GNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 251/498 (50%), Gaps = 20/498 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    N L  +   P    +G ++  LVKS      L++F +M  RG++ N V +NILI+
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
            F + G    A  +  + +++    P+ +T N  I G C  G+  + L   D++      
Sbjct: 114 CFCQLGLIPFAFSVLAK-ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  +Y + I+GLCK G    A  + R +    + +D V Y+ +ID  C+   + + F+L
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 299 W-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           + E++ R+   N+V+Y+ LI G    GK+ +AI ++  +  +N N D  T  +L++  CK
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                             EGR+ +A + +  M K G K +  T NSLM+G+   +++  A
Sbjct: 293 ------------------EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +   MS +G + TV SYN +ING CK++   +A    KEM  K   P++ITY+ LI+G
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDG 394

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+S +I  AL+L      +G  PD+  Y+ ++  LC    V+ A+ L   +K +   PN
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPN 454

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + TY  L+DGL K G  + A  I+  +L +     + +Y + ++G CS     +A   L+
Sbjct: 455 MYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLS 514

Query: 598 DALCRGILPTTITWHILV 615
                  +P  IT+ I++
Sbjct: 515 KMKDNSCIPDAITYEIII 532



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 251/532 (47%), Gaps = 60/532 (11%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L + + +         +  +G+KP+  ++  +IN   + G +  A +V  ++ 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G E + +  N  I GF  KG   +A    ++LV     + + V+Y  +INGLCK G  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV-ALGFHLDQVSYGTLINGLCKVGET 191

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              LE+  R+     + D   Y + I  +CK  NV  A  +Y EMV   I  + VTY+A+
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSAL 251

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC  GK+K+   L+  M  +    +V ++NIL+    + G+V EA +   ++ ++  
Sbjct: 252 ISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI 311

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  L++G C          ++NEV          A S++N M   G      + 
Sbjct: 312 KPDIVTYNSLMDGYC----------LVNEVNM--------AKSILNTMSHRGVTATVRSY 353

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF +   ++ A+ LFKEM  K   P V++YN+LI+GLCK  R   A   +  M +
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413

Query: 462 KGWKPDMITYS-----------------------------------LLINGLCQSKKIDM 486
           +G +PD+ITYS                                   +LI+GLC+  +++ 
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  +    L KG+   V  Y ++I G CS G  ++AL L S MK  +C+P+ +TY  ++ 
Sbjct: 474 ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIIC 533

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            LF   + DKA ++   ++   L    + Y     G  S S M+    FLN+
Sbjct: 534 SLFDKDENDKAEKLLREMITRGLLYSFLEY-----GSWSLSFMAAPAHFLNN 580



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/611 (23%), Positives = 271/611 (44%), Gaps = 81/611 (13%)

Query: 7   RLLNLLKAEKNPHTALALFDSATR---EPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           ++L  L   K+ HT L+LF        +P + +   L +   +  + P     +++IL++
Sbjct: 75  QILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKM 134

Query: 64  IEIQKCYCPEDVALSVI--------QAYGKNSMPDKALDVFQRMNEI-FGCEAGILCRKR 114
                 Y P+ + L+          Q +   +  DK + +   ++++ +G     LC+  
Sbjct: 135 -----GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +   A   L  +  K ++ DV  Y T+I+ + K  ++  A  ++ EM  R + +N+V Y+
Sbjct: 190 ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI GF   G    A  ++ ++  E ++ P+V T+N++++  CK GR  E       M K
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 308

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + D  TY S + G C    V  A+ +   M   G+     +YN +I+GFC+   + +
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L++ M  K    NV++YN LI GL ++G++  A+ + +L+ ++    D  T+  +++
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428

Query: 354 GLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKL 396
            LCKN  ++KAI +L ++++ G                  GRL DA ++   +   G  L
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL 488

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
              T   ++ GF      + A+ L  +M    C P  ++Y  +I  L   +   +A   +
Sbjct: 489 TVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548

Query: 457 KEMLEKGWKPDMITY--------------------------------SLLINGL---CQS 481
           +EM+ +G     + Y                                 LL+  +   C  
Sbjct: 549 REMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVL 608

Query: 482 KKIDMALK----------LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            K +M  K            C + ++G+  DV  Y ++I G CS G  +++L L S M+ 
Sbjct: 609 TKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEV 668

Query: 532 RNCVPNLVTYN 542
             C+P+ VTY+
Sbjct: 669 NGCIPDAVTYD 679


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 258/508 (50%), Gaps = 28/508 (5%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A    N L  +   P  + +  ++  LVKS      L +  +M  RG++ N+V  NIL
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+ F + G    A  ++ + +++    P+ +T+  +  GLC  G+  +     D++    
Sbjct: 127 INCFCQLGLIPFAFSVFAK-ILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 237 REKDSFTYCSFIHGLCKAGNVEGA----ERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
              D  +Y + IHGLCK G    A    +RV   +V+  +    V YN +ID  C+   +
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV----VMYNTIIDSMCKVKLV 241

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E F+L+  M  KG   +VV+Y+ LI G    GK+ +AI ++  +  +N   D  T  +L
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +N  CK                  +G++ +  ++ + M K G K N  T NSLM+G+   
Sbjct: 302 VNAFCK------------------DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            ++  A  +F  M++ G +P + SY+ +ING CK+++F EA +  KEM  K   PD++TY
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S LI+GL +S +I  AL+L  Q   +G  P++  YN ++  LC   +V+ A+ L +  K 
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +   P++ TY+ L+ GL ++G  + A +++  +L +    D+ +Y I ++G C     ++
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE 523

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVM 619
           A   L+     G +P   T+ I++ ++ 
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLF 551



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 247/504 (49%), Gaps = 21/504 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           QF K   F N +     K +  SY +       + D+  A+++F+ +  R        +N
Sbjct: 31  QFLKNTHF-NFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFN 89

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ++    K   Y     + +++     + PN+V  N++IN  C+ G       ++ ++ K
Sbjct: 90  KILGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D+ T+ +   GLC  G ++ A   + ++V  G   D ++Y  +I G C+ G+ + 
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 295 CFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L + V G     NVV YN +I  + +   V+EA  ++  +  K  + D  T+  LI+
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALIS 268

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G C          IL        G+L DA  L N+M     K + YT N L+N F +  K
Sbjct: 269 GFC----------IL--------GKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++    +F  M ++G  P  V+YN+L++G C V+   +A S    M + G  PD+ +YS+
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +ING C+ KK D A+ L  +  +K   PDV  Y+ LI GL  +G++  ALQL   M  R 
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+ TYN+++D L KT   DKA+ +     ++  +PDI +Y+I +KGLC   ++ DA 
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           +   D L +G       + I+++ 
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQG 514



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 276/558 (49%), Gaps = 47/558 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNS 125
           S    +  N+  D A+ +F R+            N+I G     L + + +         
Sbjct: 55  STSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGS----LVKSKHYHTVLYLSQK 110

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +  +G+KP++ +   +IN   + G +  A +VF ++ + G   + + +  L  G   KG 
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A    +++V     + + ++Y  +I+GLCK G     L++  R+  N  + +   Y 
Sbjct: 171 IQQAFLFHDKVV-ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I  +CK   V  A  ++ EMV  GI  D VTY+A+I GFC  GK+K+  +L+  M  +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               +V ++NIL+    ++GK+ E  ++++++ ++    +  T+  L++G C    +NKA
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
             I N + +GG      + S+                  ++NGF +  K + A+ LFKEM
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSI------------------MINGFCKIKKFDEAMNLFKEM 391

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            RK   P VV+Y++LI+GL K  R   A   V +M ++G  P++ TY+ +++ LC++ ++
Sbjct: 392 HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQV 451

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+ L  +F  KGF PD++ Y+ILI GLC +GK+EDA +++ ++  +    ++  Y  +
Sbjct: 452 DKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G    G  ++AL + + + +    PD  +Y I +  L        A + L + + RG 
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG- 570

Query: 605 LPTTI----------TWH 612
           LP             TWH
Sbjct: 571 LPLNFYDLYLTRLAQTWH 588


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 258/539 (47%), Gaps = 27/539 (5%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           F+  N +    A   C        +R L       + P  +++G     L + G    AL
Sbjct: 142 FRSYNVVLSTLARADCHADALLLYRRML----RDRVPPTTFTFGVAARALCRLGRAGDAL 197

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           A+   M   G   + V Y  +I     +G    A  + + +++      +V T+N ++ G
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL-MGCAADVNTFNDLVLG 256

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC  GR  E   + DRM          TY   + GLC+    + A  +   + E    V+
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE----VN 312

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            V  N +I G    GK+    EL+E+MG KGC  +V +Y+IL+ GL + G+   A+ + +
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            + EK C  +  T+  L++  C+NG  + A  +L+++   G                 +G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L  A  LV  M   GCK +  T N+++        +E A  +F+ +  +G     ++YN
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLI+ L +  R+ E      EML  G + D+I+Y+ LI  LC+   +D ++ L  + + K
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P+   YN+LI+ LC AGKV DAL+L   M  +   P++VTYNTL++GL K G    A
Sbjct: 553 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 612

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           L +   +  E + PDI++YNI +   C    + DA   L+ A+  GI+P   TW ++V+
Sbjct: 613 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 223/497 (44%), Gaps = 50/497 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG  A  LCR  +   A   L  +   G  PD   Y TVI+ LV  G +  A  + DEM 
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G   +V  +N L+ G    G    A  + +R+ M     P+VVTY  ++ GLC+  + 
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRM-MTQGCMPSVVTYGFLLQGLCRTRQA 298

Query: 223 DE----------------------CL---------EMWDRMKKNEREKDSFTYCSFIHGL 251
           DE                      CL         E+++ M       D  TY   +HGL
Sbjct: 299 DEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNV 310
           CK G    A R+  EM E G   + VTY+ ++  FCR G   +   + + M  KG  +N 
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-N 369
             YN +I  L ++GK+D+A  + + ++ + C  D  T+  +I  LC N  + +A  I  N
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 370 EVEEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            +EEG                  GR  +   L + M  HGC+L+  + N L+    +   
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ ++ L +EM  KG  P   SYN LIN LCK  +  +A    KEML +G  PD++TY+ 
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LINGLC+      AL L  +   +   PD+  YNILI   C    ++DA  L        
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658

Query: 534 CVPNLVTYNTLMDGLFK 550
            VPN  T+  ++    +
Sbjct: 659 IVPNERTWGMMVQNFVR 675



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 238/498 (47%), Gaps = 52/498 (10%)

Query: 154 ALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           AL + D+M  R  V  +   YN+++    +   +  A  ++ R++ +  V P   T+ V 
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRD-RVPPTTFTFGVA 183

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
              LC+ GR  + L +   M ++    D+  Y + IH L   G V  A  +  EM+  G 
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL------------------------ 308
             D  T+N ++ G C  G+++E   L + M  +GC+                        
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 309 --------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
                   NVV  N +IRG L  GK+  A  ++E++  K C  D  T+ +L++GLCK G 
Sbjct: 304 MLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGR 363

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
              A+++L+E+EE                   GC  N  T ++L++ F +    ++A  +
Sbjct: 364 FGSAVRMLDEMEE------------------KGCAPNIVTYSTLLHSFCRNGMWDDARAM 405

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             +M  KG S     YN +I  LCK  +  +A   V+EM  +G KPD+ TY+ +I  LC 
Sbjct: 406 LDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN 465

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +  ++ A  +    +++G   +   YN LIH L   G+ ++ L+L S M    C  ++++
Sbjct: 466 NDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVIS 525

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN L+  L K G+ D+++ +   ++ + ++P+  SYN+ +  LC   ++ DA E   + L
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585

Query: 601 CRGILPTTITWHILVRAV 618
            +G+ P  +T++ L+  +
Sbjct: 586 NQGLTPDIVTYNTLINGL 603


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 269/559 (48%), Gaps = 57/559 (10%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + ++ E+A R L    E    P+   Y TVING  K+G +  A  + DEM ERGV+ +V+
Sbjct: 88  KAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVL 147

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            ++ LI G  +KG    A E ++ +  E S  PNV+TYN ++NGLCK  R DE LE++D 
Sbjct: 148 LHSTLIQGLCRKGRIDEALEQFKSMGEECS--PNVITYNTVVNGLCKANRIDEALELFDD 205

Query: 232 MKKNER-----EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           M+K        E D  +Y + I  LCKA  V+ A   ++ M   G   + VTY+++IDG 
Sbjct: 206 MEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGL 265

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+  +  EC EL   M  KG  +N++ +N ++  L +N + ++A   +E L +     + 
Sbjct: 266 CKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNV 325

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+ V ++GLCK G +++A +IL E+ E                    GR+  A  +  R
Sbjct: 326 VTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR 385

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M  H C  +  T  +L++GF +  K   A  + ++M   G  P + +YN L++ +C  + 
Sbjct: 386 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADS 445

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A     +M  K  +PD  TY+ LI  LC+++++D A +           P+  + + 
Sbjct: 446 VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF------------------- 549
           L+  LC  G+V++A  +  N+ +  C P   T+  L++ L+                   
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVA 565

Query: 550 -------------KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
                        K G  D+A+E+   ++ + +RPD  +Y   L+ LC   R+  A    
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625

Query: 597 NDALCRGILPTTITWHILV 615
                RG  P  +T+ +L+
Sbjct: 626 EKMASRGCAPGLVTYTLLI 644



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 235/464 (50%), Gaps = 26/464 (5%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + N     +L++ F K   +  A  + +   +E   +PN + Y  +ING CK G+ D+
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE-ELEPLCFPNEIMYTTVINGFCKAGQVDQ 129

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             E+ D MK+   + D   + + I GLC+ G ++ A   ++ M E     + +TYN +++
Sbjct: 130 AFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVN 188

Query: 285 GFCRAGKIKECFELWEVMGRK-----GC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           G C+A +I E  EL++ M ++     GC  +V+SY+ +I  L +  +VD+A   ++ +R 
Sbjct: 189 GLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRA 248

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
             C  +  T+  LI+GLCK    ++ +++L  ++E G G                  +N 
Sbjct: 249 VGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG------------------INI 290

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N++++   +  + E A   F+ + + G  P VV+YN  ++GLCK  R  EAY  + E
Sbjct: 291 IDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLE 350

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+E    PD+ITYS +I+G C++ ++D A  +  + +     P    +  L+HG     K
Sbjct: 351 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 410

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
             +A +++ +M     +P L TYN LMD +      + ALEI++ +  ++ +PD  +Y  
Sbjct: 411 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAP 470

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++ LC   R+ +A EFL+      ++P     H LV  +   G
Sbjct: 471 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 514



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 297/645 (46%), Gaps = 77/645 (11%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+  ++P  A   F  A  +PG+ H+ +    +L   +  K      R+L+      C+
Sbjct: 49  VLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
             E +  +VI  + K    D+A ++   M E  G +  +L         CRK + ++A  
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKE-RGVKMDVLLHSTLIQGLCRKGRIDEALE 167

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-----GVETNVVCYNIL 176
              S+ E+   P+V +Y TV+NGL K+  +  AL +FD+M +R     G E +V+ Y+ +
Sbjct: 168 QFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTV 226

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM-------- 228
           ID   K     +A E ++R+       PNVVTY+ +I+GLCK  R  ECLE+        
Sbjct: 227 IDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285

Query: 229 ---------------------------WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
                                      ++R+ K+ ++ +  TY   +HGLCKAG V+ A 
Sbjct: 286 FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAY 345

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           R+  EMVES +  D +TY+++IDGFC+AG++ +  +++  M    C+ + V++  L+ G 
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG--- 377
            E+ K  EA  + E +          T+ VL++ +C    +  A++I ++++        
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465

Query: 378 --------------RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         R+ +A   ++ M+      N   C++L+    +  +++ A  +   
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +   GC P   ++  L+  L   +++  A   ++     G+  D  TYSL +  +C++ K
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGK 582

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            D A+++  Q + KG  PD   Y  ++  LC   +VE A+  +  M  R C P LVTY  
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTL 642

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           L+         D+A  I+  ++     P       T++ L SC R
Sbjct: 643 LIGEACSADMADEAFRIFEAMVAAGFTPQA----QTMRTLSSCLR 683



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 222/510 (43%), Gaps = 99/510 (19%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIF----GCEAGI---------LCRKRQFEKAKRFLN 124
           +V+    K +  D+AL++F  M + +    GCE  +         LC+ ++ +KA  +  
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +   G  P+V +Y ++I+GL K       L +   M E+G   N++ +N ++   +K  
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
           +  +A + +ERL +++   PNVVTYNV ++GLCK GR DE   +   M +++   D  TY
Sbjct: 305 EQEKACQFFERL-LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 245 CSFIHGLCKAGNVEGAE-----------------------------------RVYREMVE 269
            S I G CKAG ++ A+                                   RV+ +MV 
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDE 328
           +G      TYN ++D  C A  ++   E++  M RK    +  +Y  LI+ L    +VDE
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE 483

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A    +++   N   +      L+  LCK G +++A  +L+ V E G             
Sbjct: 484 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543

Query: 376 -----------------EGRLADAAS-------------------LVNRMDKHGCKLNAY 399
                             G +ADAA+                   ++ +M   G + +  
Sbjct: 544 ELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEG 603

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  +++       ++E+AI  F++M+ +GC+P +V+Y  LI   C  +   EA+   + M
Sbjct: 604 TYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +  G+ P   T   L + L  +   D+ ++
Sbjct: 664 VAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 693



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 137/239 (57%), Gaps = 10/239 (4%)

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           +K G + NAYTC  L+N F++A + E A  L KE     C P  + Y T+ING CK  + 
Sbjct: 68  NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV 127

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMYN 507
            +A+  + EM E+G K D++ +S LI GLC+  +ID AL+   QF   G   +P+V  YN
Sbjct: 128 DQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE---QFKSMGEECSPNVITYN 184

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKR-----NCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
            +++GLC A ++++AL+L+ +M+KR      C P++++Y+T++D L K    DKA E + 
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            +      P++++Y+  + GLC   R S+  E L     +G     I ++ ++ A+  N
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 277/554 (50%), Gaps = 20/554 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCR------- 112
           L L+E ++ + P+ V  + ++    + S+  +A+D+  RM  I      +  R       
Sbjct: 260 LSLLEKEE-FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCL 318

Query: 113 -KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
            K Q  + KR L+ +  +G  P+   + ++++   KS D   A  +F +M + G +   +
Sbjct: 319 GKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378

Query: 172 CYNILIDGF-----FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
            YNI I            D +   E     +++  V  N V  +     LC  G+FD+  
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E+   M       D  TY   I  LC A  VE A  ++ EM ++GI     TY  +ID F
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AG I++    ++ M R  C  NVV+Y  LI   L+  KV +A  ++E++  +    + 
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL-NAYTCNSL 404
            T+  LI+G CK G ++KA QI   ++   E    D   +  ++D + C+  N  T  +L
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGDIESSDID---MYFKLDDNDCETPNIITYGAL 615

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G  +A+++E A  L   MS  GC P  + Y+ LI+G CK  +   A     +M E+G+
Sbjct: 616 VDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGY 675

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P++ TYS LIN L + K++D+ LK+  + L+   TP+V +Y  +I GLC  GK E+A +
Sbjct: 676 CPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYR 735

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   M++  C PN++TY  ++DG  K G  ++ LE++  +  +   P+ I+Y + +   C
Sbjct: 736 LMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCC 795

Query: 585 SCSRMSDAFEFLND 598
           S   + +A   L++
Sbjct: 796 STGLLDEAHRLLDE 809



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 255/516 (49%), Gaps = 41/516 (7%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC   + EKA      + + G+ P VY+Y  +I+   K+G +  A   FDEM      
Sbjct: 461 GFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCT 520

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K      A +++E +++E S  PNVVTY  +I+G CK G+ D+  +
Sbjct: 521 PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS-KPNVVTYTALIDGHCKAGQIDKACQ 579

Query: 228 MWDRMKKNEREKDS----------------FTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM+ +    D                  TY + + GLCKA  VE A  +   M  +G
Sbjct: 580 IYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNG 639

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+ GK++   E++  M  +G C N+ +Y+ LI  L +  ++D  +
Sbjct: 640 CEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVL 699

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GLCK                   G+  +A  L+ +M+
Sbjct: 700 KVLSKMLENSCTPNVVIYTDMIDGLCK------------------VGKTEEAYRLMLKME 741

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + GC  N  T  ++++GF +  K+E  + L+++M  KGC+P  ++Y  LIN  C      
Sbjct: 742 EVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLD 801

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA+  + EM +  W   + +Y  +I G   +++   ++ L  +  +    P  ++Y ILI
Sbjct: 802 EAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILI 859

Query: 511 HGLCSAGKVEDALQLYSNMKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
                AG++E AL L   +       V N   Y +L++ L      DKA E++  ++ + 
Sbjct: 860 DNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKN 919

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + P++ ++   +KGL    +  +A + L+D++C+ +
Sbjct: 920 VVPELSTFVHLIKGLTRVGKWQEALQ-LSDSICQMV 954



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 32/415 (7%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N +I   C+ G ++  LE   R+K    +    TY + I    +A  ++ A  V+REM  
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           SG  +D  T        C+AG+  +   L E    +   + V YN ++ GL E     EA
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE--KEEFVPDTVFYNRMVSGLCEASLFQEA 291

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + I + +R  +C  +  T+ +L++G                    G+G+L     +++ M
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCL------------------GKGQLGRCKRILSMM 333

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC  N    NSL++ + ++     A  LFK+M + GC P  + YN  I  +C  E  
Sbjct: 334 MTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEEL 393

Query: 450 G---------EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
                     +AYS   EML+ G   + +  S     LC + K D A ++ C+ + KGF 
Sbjct: 394 PGSDLLELAEKAYS---EMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD + Y+ +I  LC A KVE A  L+  MKK   VP++ TY  L+D   K G   +A   
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++ +L +   P++++Y   +       ++ DA +     L  G  P  +T+  L+
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALI 565



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 205/489 (41%), Gaps = 80/489 (16%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            TYN +I    +  + D    +   M  +    D  T   F + LCKAG    A      
Sbjct: 206 TTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDA----LS 261

Query: 267 MVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
           ++E   FV D V YN M+ G C A   +E  ++ + M    C+ NVV+Y IL+ G L  G
Sbjct: 262 LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKG 321

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKN--------------------GYL--- 361
           ++     I  ++  + C  +      L++  CK+                    GYL   
Sbjct: 322 QLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN 381

Query: 362 ---------------------NKAIQ-------ILNEVEEG-------GEGRLADAASLV 386
                                 KA         +LN+V          G G+   A  ++
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   G   +  T + ++     ASK+E A  LF+EM + G  P+V +Y  LI+  CK 
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
               +A ++  EML     P+++TY+ LI+   +++K+  A KL    L +G  P+V  Y
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 507 NILIHGLCSAGKVEDALQLYSNMK---------------KRNC-VPNLVTYNTLMDGLFK 550
             LI G C AG+++ A Q+Y+ M+                 +C  PN++TY  L+DGL K
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               ++A E+ + +      P+ I Y+  + G C   ++ +A E       RG  P   T
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYT 681

Query: 611 WHILVRAVM 619
           +  L+ ++ 
Sbjct: 682 YSSLINSLF 690


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 255/498 (51%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + +  K FL  + +KG+  D+ +Y T+IN   + G L  A  V + M  +G++  
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN +I+G  KKG Y+RAK ++  + +   + P+  TYN ++   C+   F E  +++
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEM-LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIF 313

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D  ++ S I    + G+++ A   +R+M  SG+  D V Y  +I+G+CR 
Sbjct: 314 SDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  E+ + M  +GC L+VV+YN ++ GL +   + +A ++++ + E+    D  T 
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK                  EG +  A SL   M +   K +  T N L++GF
Sbjct: 434 TTLIHGHCK------------------EGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + +++E A  L+ EM  +   P  +SY  L+NG C +    EA+    EM+ KG KP +
Sbjct: 476 CKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTL 535

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T + +I G C+S  +  A +   + + +G  PD   YN LI+G      ++ A  L + 
Sbjct: 536 VTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINK 595

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+ +   P++VTYN +++G  + G   +A  I   ++E  + PD  +Y   + G  S   
Sbjct: 596 METKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDN 655

Query: 589 MSDAFEFLNDALCRGILP 606
           + +AF F ++ L RG +P
Sbjct: 656 LKEAFRFHDEMLQRGFVP 673



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 261/512 (50%), Gaps = 20/512 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+  +       L  KG    + +  +++ GLVK G +  A  V++E+   G+E NV 
Sbjct: 127 QARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVY 186

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+++   K       K     +  +  ++ ++VTYN +IN  C+ G   E  E+ + 
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDM-EQKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M     +   FTY + I+GLCK G    A+ V+ EM+  G+  D  TYN ++   CR   
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
             E  +++  M  +G   +++S++ LI     NG +D+A+  +  ++      D+  + +
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LING C+NG +++A++I +                  +M + GC L+    N+++NG  +
Sbjct: 366 LINGYCRNGMMSEALEIRD------------------KMLEQGCALDVVAYNTILNGLCK 407

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              L +A  LF EM  +G  P   ++ TLI+G CK    G+A S    M +K  KPD++T
Sbjct: 408 KKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVT 467

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++LI+G C++ +++ A +L  + + +   P+   Y IL++G C+ G V +A +L+  M 
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           ++   P LVT NT++ G  ++GD  KA E    ++ E + PD I+YN  + G      M 
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMD 587

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            AF  +N    +G+ P  +T+++++      G
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 184/366 (50%), Gaps = 20/366 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+  R    ++A  +   +   GL PD   Y  +ING  ++G +  AL + D+M 
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+G   +VV YN +++G  KK     A  +++ +V E  V P+  T+  +I+G CK G  
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMV-ERGVVPDFCTFTTLIHGHCKEGNM 446

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            + L ++  M +   + D  TY   I G CK   +E A  ++ EM+   IF + ++Y  +
Sbjct: 447 GKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAIL 506

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ++G+C  G + E F LW+ M RKG    +V+ N +I+G   +G + +A      +  +  
Sbjct: 507 VNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGV 566

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             DS T+  LING  K  Y++KA                    L+N+M+  G + +  T 
Sbjct: 567 GPDSITYNTLINGFVKGEYMDKAF------------------FLINKMETKGLQPDVVTY 608

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF +  +++ A  + ++M  +G  P   +Y TLING    +   EA+ F  EML+
Sbjct: 609 NVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQ 668

Query: 462 KGWKPD 467
           +G+ PD
Sbjct: 669 RGFVPD 674


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 302/658 (45%), Gaps = 92/658 (13%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           ++    +LN LK E N   AL  F S      + H+P  +  +++RL   + +  +  +L
Sbjct: 37  LLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLL 96

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
           +L++++   C ED+ + VI AY +  + ++AL  F R+ E FGC                
Sbjct: 97  QLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGE-FGC---------------- 139

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
                     KP V  Y  V++ L+          +++ M   G+E NV  YN+L+    
Sbjct: 140 ----------KPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALC 189

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K      A+++   +  +  + P+ V+Y  +++ +C+ G+ +E  E+  R+K       S
Sbjct: 190 KNDRVDAARKLLAEMSYKGCI-PDAVSYTTVVSSMCRLGKVEEARELSMRIK-------S 241

Query: 242 FT--YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           F   Y + I+G C+   +E    ++ EM   GI  D +TY+ +I+     G ++    + 
Sbjct: 242 FVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVL 301

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +GC  NV ++  L++G    G++ EA+ +W  + ++    ++  +  LI+GLC  
Sbjct: 302 AKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCS- 360

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             G++ +A S+  +M+++G   N  T ++L++GF +A  L  A 
Sbjct: 361 -----------------YGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            ++ +M   GC P VV Y  +++ LC+   F  A   ++ M      P+ IT++  I GL
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C S K + A+K+  Q  Q G  P+VT YN ++ GL +A +  +ALQ+   +++     NL
Sbjct: 464 CCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNL 523

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT------------------- 579
           VTYNT++ G    G    AL+I   +L    +PD I+YN                     
Sbjct: 524 VTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583

Query: 580 -----------------LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                            L G+C+   + +A   L+  +  GI P   TW+ LVR + +
Sbjct: 584 LTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFS 641



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 245/514 (47%), Gaps = 25/514 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L  +R  +  +  L  +  +G+  +   +  VIN   ++G    AL  F  + E G + +
Sbjct: 83  LGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPS 142

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN ++D    +  +     I+  +  +  +  NV TYN+++  LCK  R D   ++ 
Sbjct: 143 VKIYNHVLDALLSENKFQMINGIYNNMKRD-GIELNVYTYNMLLKALCKNDRVDAARKLL 201

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D+ +Y + +  +C+ G VE A  +   +     FV    YNA+I+GFCR 
Sbjct: 202 AEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKS---FVPV--YNALINGFCRE 256

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K++E FEL+  M  +G   +V++Y+ +I  L E G V+ A+++   +  + C+ +  T 
Sbjct: 257 HKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTF 316

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G    G                  RL +A  L NRM + G + N    N+L++G 
Sbjct: 317 TSLMKGYFMGG------------------RLCEALDLWNRMIQEGSEPNTVAYNTLIHGL 358

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               K+  A+ + ++M R G  P   +Y+TLI+G  K      A     +M+  G  P++
Sbjct: 359 CSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNV 418

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y+ +++ LC++   + AL L          P+   +N  I GLC +GK E A+++ + 
Sbjct: 419 VVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ 478

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++  C PN+ TYN ++DGLF      +AL+I   I E  ++ ++++YN  L G C    
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A +     L  G  P +IT++ ++ A    G
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQG 572


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 259/514 (50%), Gaps = 21/514 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+K     A   L  + +KG  P    +  VI   +K G +L A+ V  EM   G   N
Sbjct: 269 VCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMN 328

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV    L+ G+ K+GD   A E+++++  E  + PN VTY V+I   CK G  D+  E++
Sbjct: 329 VVVATTLMKGYCKQGDLDSALELFDKM-NENGICPNNVTYAVIIEWCCKNGNMDKAYEIY 387

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++MK  +     F   S I G  KA + E A +++ E V  GI  +  TYN+++   C+ 
Sbjct: 388 NQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKE 446

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E   +WE M RKG   +VVSYN +I G  + G +D A  ++  + EK    +  T+
Sbjct: 447 GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VL++G  K G    A                    L +RM       + +TCN ++NG 
Sbjct: 507 SVLMDGYFKKGDTEYAF------------------GLYDRMRGENIAPSDFTCNIIINGL 548

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A +   +    K++ ++G  PT ++YN +I+G  K      A +   EM + G  P++
Sbjct: 549 CKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNV 608

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ LING C+S  +D+ALK+  +   KG   DVT+Y  LI G C  G + +A QL S 
Sbjct: 609 FTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSE 668

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +++    PN V Y++++ G  K  + + AL +   ++ E +  D+  Y   + GL    +
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A E   + L +GI+P  IT+ +L+  + N G
Sbjct: 729 LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 257/493 (52%), Gaps = 30/493 (6%)

Query: 71  CPEDVALSVIQAYG-KNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKR 121
           CP +V  +VI  +  KN   DKA +++ +M        +F   + I    + R  E+A +
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
             +     G+  +V++Y ++++ L K G +  A +++++M  +GV  +VV YN +I G  
Sbjct: 421 LFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           ++GD   A  ++  + +E  + PN++TY+V+++G  K G  +    ++DRM+        
Sbjct: 480 QQGDMDSANGVFVEM-LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           FT    I+GLCKAG    ++   +++V+ G     +TYN +IDGF + G +     ++  
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + G   NV +Y  LI G  ++  +D A+ + + ++ K    D T +  LI+G C+ G 
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           +  A Q+L+E++E                   G   N    +S+++GF +   +E A+ L
Sbjct: 659 MVNASQLLSELQE------------------VGLSPNKVVYSSMISGFRKLQNMEAALHL 700

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            K M  +G    +  Y TLI+GL K  +   A     EML KG  PD+ITYS+LI+GLC 
Sbjct: 701 HKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCN 760

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             +++ A K+     +K  TP V +YN LI G    G +++A +L++ M  +  VP+  T
Sbjct: 761 KGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820

Query: 541 YNTLMDGLFKTGD 553
           Y+ L++G  K G+
Sbjct: 821 YDILVNGKVKDGN 833



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 214/458 (46%), Gaps = 21/458 (4%)

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           E++   +N L++ + K      A + +  L+ E  + P +   N+ ++ L K     E  
Sbjct: 151 ESDSRVFNYLLNSYVKTKRINDAVDCFNSLI-EKDIVPCLTVMNIFLSELVKNNMIREAR 209

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++++M     + D  T    I    + G +E AE  +RE    G+ +DA  Y+ +I+  
Sbjct: 210 DVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAV 269

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+         L   M  KG + + V +  +I   ++ GK+ EA+ +   +       + 
Sbjct: 270 CKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNV 329

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
                L+ G CK G L+ A++                  L ++M+++G   N  T   ++
Sbjct: 330 VVATTLMKGYCKQGDLDSALE------------------LFDKMNENGICPNNVTYAVII 371

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
               +   ++ A  ++ +M  K  SPTV + N+LI G  K     EA     E +  G  
Sbjct: 372 EWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA 431

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            ++ TY+ L++ LC+  K+  A  +  + ++KG  P V  YN +I G C  G ++ A  +
Sbjct: 432 -NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGV 490

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M ++   PNL+TY+ LMDG FK GD + A  +++ +  E + P   + NI + GLC 
Sbjct: 491 FVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCK 550

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             R S++ + L   +  G +PT +T++ ++   +  G+
Sbjct: 551 AGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGS 588


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 251/487 (51%), Gaps = 23/487 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+     A+R+L+ +   G +PD +++ ++I G  ++  L  A  +FD+M  RG   +
Sbjct: 139 LCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQD 198

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI+GF + G    A E++  L       P++ T+  ++ GLC   R +E L M 
Sbjct: 199 AVSYAALIEGFCETGRVDEALELFRELEQ-----PDMYTHAALVKGLCDARRGEEGLYML 253

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK+      +  Y + +   C+    E AE++  EM ++G+   AVT  A+++ +CR 
Sbjct: 254 QKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCRE 313

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++     ++E M  KGC  NV +YN +++G    GKV +A+++ + +RE     D  T+
Sbjct: 314 GRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +LI G C +G++  A ++L  +E  G                  G++ +A SL + ++ 
Sbjct: 374 NLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + N+ T N+++NG  +  K + A    ++M   GC+P   +Y+  I  LCK +   E
Sbjct: 434 RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSRE 493

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
             SF+ EML+K  KP  + Y+++I+ L + +   +A ++  Q +  G +PDV  Y   + 
Sbjct: 494 GLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVR 553

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C+ G++ +A  +   MKK   + + + YNTL+DG    G  D A+ I  H+      P
Sbjct: 554 AYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMP 613

Query: 572 DIISYNI 578
           +  ++ I
Sbjct: 614 NHFTFFI 620



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 203/391 (51%), Gaps = 22/391 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I  LC+  ++  A+R    MV SG   DA T+N++I G+CR  ++    +L++ M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKM 190

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G   + VSY  LI G  E G+VDEA+   EL RE     D  TH  L+ GLC     
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEAL---ELFRELE-QPDMYTHAALVKGLCDARRG 246

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            + + +L +++E G                 E +  +A  ++N M  +G    A TC ++
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +N + +  ++  A+ +F+ M  KGC P V +YN ++ G C V +  +A + + +M E G 
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +PD++TY+LLI G C    I+ A +L       G   D   YN+LI  LC  GKV++A  
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+  ++ R   PN VT+NT+++GL K G  D A      ++     PD  +Y+  ++ LC
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                 +   F+++ L + + P+T+ + I++
Sbjct: 487 KTKGSREGLSFIDEMLQKDVKPSTVNYTIVI 517



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 205/436 (47%), Gaps = 20/436 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P   TYN +I  LC+             M ++    D+FT+ S I G C+   ++ A+ +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           + +M   G   DAV+Y A+I+GFC  G++ E  EL+  + +    ++ ++  L++GL + 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQP---DMYTHAALVKGLCDA 243

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
            + +E + + + ++E      +  +  L++  C+     +A ++LNE+ + G        
Sbjct: 244 RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTC 303

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                    EGR++ A  +   M   GC+ N +T N+++ GF    K+  A+ L  +M  
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P VV+YN LI G C       A+  ++ M   G   D  TY++LI+ LC++ K+D 
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L      +G  P+   +N +I+GLC  GK + A      M    C P+  TY+  ++
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIE 483

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L KT    + L   + +L++ ++P  ++Y I +  L        A       +  G  P
Sbjct: 484 NLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSP 543

Query: 607 TTITWHILVRAVMNNG 622
             +T+   VRA  N G
Sbjct: 544 DVVTYTTSVRAYCNEG 559



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 235/536 (43%), Gaps = 43/536 (8%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++ L + Q+M E+        +     + CR+++ E+A++ LN +++ GL P   +   V
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +N   + G + GA+ VF+ M  +G E NV  YN ++ GF   G   +A  + +++  E  
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM-RECG 365

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V P+VVTYN++I G C  G  +    +   M+ N    D +TY   I  LCK G V+ A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            ++  +   GI  ++VT+N +I+G C+ GK        E M   GC  +  +Y+  I  L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +     E +S  + + +K+    +  + ++I+ L K      A +I  ++   G     
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       EGRL +A ++V  M K G  ++A   N+L++G     K ++A+ + K 
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605

Query: 424 MSRKGCSPTVVSYNTL----------------INGLCKVERFGEAYSFVKEMLEKGWKPD 467
           M+     P   ++  L                   + K     + +   + M +      
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSS 665

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y  ++ G  + +++D    L     +     +  +Y  L++  C      DA  L  
Sbjct: 666 ARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLC 725

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +M     +PNL++Y  L+ G    G  D+A EI+  +  +    D I + I + GL
Sbjct: 726 SMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGL 781



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 138/601 (22%), Positives = 251/601 (41%), Gaps = 75/601 (12%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKP 133
           ++I+ + +    D+AL++F+ + +  ++   A +  LC  R+ E+    L  + E G +P
Sbjct: 204 ALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRP 263

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
              +Y  +++   +      A  + +EMF+ G+    V    +++ + ++G    A  ++
Sbjct: 264 ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF 323

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           E + ++    PNV TYN M+ G C  G+  + + + D+M++   E D  TY   I G C 
Sbjct: 324 ESMKLK-GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            G++E A R+ R M  +G+  D  TYN +ID  C+ GK+ E   L++ +  +G   N V+
Sbjct: 383 DGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +N +I GL + GK D A +  E +    C  D+ T+   I  LCK               
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKT-------------- 488

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
           +G      +  S ++ M +   K +      +++   +      A  ++ +M   GCSP 
Sbjct: 489 KGSR----EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+Y T +   C   R  EA + V EM + G   D + Y+ LI+G     K D A+ +  
Sbjct: 545 VVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILK 604

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDA----------------LQLYSNMKKRNCVP 536
                   P+   + IL+  L      ED                  +L+  MKK +   
Sbjct: 605 HMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPS 664

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR-------------------------- 570
           +   Y  +++G  +    D+   + +H+ E+ L                           
Sbjct: 665 SARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALL 724

Query: 571 ---------PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
                    P++ISY   L G  +  +   A E       +      I W I++  ++  
Sbjct: 725 CSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQ 784

Query: 622 G 622
           G
Sbjct: 785 G 785



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 218/517 (42%), Gaps = 51/517 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +V+ AY +      A+ VF+ M ++ GCE  +          C   +  KA   L+ + E
Sbjct: 305 AVVNAYCREGRMSGAVRVFESM-KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G++PDV +Y  +I G    G +  A  +   M   G+  +   YN+LID   K G    
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +++ L     + PN VT+N +INGLCK G+FD      ++M       D++TY  FI
Sbjct: 424 ACSLFDGLEYR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 249 HGLCKA-GNVEG----------------------------------AERVYREMVESGIF 273
             LCK  G+ EG                                  A R++ +MV  G  
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D VTY   +  +C  G++ E   +   M + G + + ++YN LI G    GK D A++I
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTI 602

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI-LNEVEEGGEGRLADAASLVNRMDK 391
              L+     A    H      L        A  + L          LAD   L   M K
Sbjct: 603 ---LKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKK 659

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +    +A    +++ GF +  +L+    L   M           Y +L+N  CK+  + +
Sbjct: 660 NSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPD 719

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A++ +  M+  G+ P++I+Y  L++G     + D A ++      K +  D  ++ I+I 
Sbjct: 720 AWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIID 779

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           GL   G  +    + S +++  C P+  TY  L + L
Sbjct: 780 GLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 5/224 (2%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGC-SPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           T  SL+  F + +     + LF  M   G  +PT  +YN LI  LC+      A  ++  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+  GW+PD  T++ LI G C+++++D+A  L  +   +GF+ D   Y  LI G C  G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           V++AL+L+  +++    P++ T+  L+ GL      ++ L +   + E   RP   +Y  
Sbjct: 215 VDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   C   +  +A + LN+    G++P  +T   +V A    G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREG 314


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 179/645 (27%), Positives = 303/645 (46%), Gaps = 38/645 (5%)

Query: 3   ISAKRLLNLLKAEKN---PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +A+     P TALA F+   R  G+ H+      +L  L   +      R
Sbjct: 52  VTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYER 111

Query: 60  ILELIEIQKCY-CPEDVALSV--IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           ++  + +  C    ED+ +S   IQA  +      AL       + +      L R    
Sbjct: 112 LV--VSMLNCSDTAEDMRVSADAIQAIRRTGSARLALS-----PKCYNFALRSLARFDMT 164

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E   R  + L + GL PD  +Y T+I    K GDL  A   F  + E G+E      N L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL 224

Query: 177 IDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           + G+ + G+  +A   W  L+M       N  +Y ++I GLC      + L ++  MK++
Sbjct: 225 VLGYCRTGELRKA--CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD 282

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               +   +   I GLCK+G V  A  ++  M ++G+    +TYNAMI G+ + G++ + 
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++ E+M + GC  +  +YN LI GL +  K +EA  +     ++       T   LING
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLING 401

Query: 355 LCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLN 397
            C     + A+++ N++                     + RL +A  L+N +  +G   N
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T  S+++G+ ++ K++ A+ + K M R GC P   +YN+L+ GL K ++  +A + + 
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M + G  P++ITY+ L+ G C     D A +L     Q G  PD   Y +L   LC AG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + E+A   YS + ++      V Y TL+DG  K G+ D A  +   +++E   PD  +Y+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + L  LC   R+++A   L+    RGI  T   + IL+  ++  G
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 256/546 (46%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   +F+ A R  N +     K D+  +G +IN L+K   L  A  + +E+   G+  NV
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  +IDG+ K G    A E+  +++      PN  TYN ++ GL K  +  + + +  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+K+    +  TY + + G C   + + A R++  M ++G+  D   Y  + D  C+AG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V Y  LI G  + G  D A ++ E + ++ C  DS T+ 
Sbjct: 582 RAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL++ LCK   LN+A+ IL+++   G                 EG+   A  + N M   
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    +N + +  +LE+A  L  +M R+G +P VV+YN LI+G   +     A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSK----------------KIDMALKLCCQFLQ 496
           +S +K M+    +P+  TY LL+  L +                  ++D+  +L  + ++
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P VT Y+ LI G C AG++E+A  L  +M  +   PN   Y  L+     T   +K
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           AL   + + E   +P + SY + + GLC+            D L  G     + W IL  
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 617 AVMNNG 622
            ++  G
Sbjct: 939 GLLKAG 944



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 266/563 (47%), Gaps = 62/563 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  +   KA      +   G  P+V ++  +I+GL KSG +  A  +FD M + GV  +
Sbjct: 263 LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 322

Query: 170 VVCYNILIDGFFKKG---DYMRAKEIWER-------LVMETSVY---------------- 203
           V+ YN +I G+ K G   D ++ KE+ E+           T +Y                
Sbjct: 323 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNN 382

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                  P VVT+  +ING C   +FD+ L M ++M  ++ + D   +   I+ L K   
Sbjct: 383 AVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR 442

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A+ +  E+  +G+  + +TY ++IDG+C++GK+    E+ ++M R GC  N  +YN 
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ GL+++ K+ +A+++   +++     +  T+  L+ G C     + A ++   +E+ G
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR  +A S + R    G  L      +L++GF +A   + A 
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAA 619

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + M  +GC+P   +Y+ L++ LCK +R  EA   + +M  +G K  +  Y++LI+ +
Sbjct: 620 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 679

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +  K D A ++  +    G  P  T Y + I+  C  G++EDA  L   M++    P++
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 739

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTYN L+DG    G  D+A      ++     P+  +Y + LK L     +     ++  
Sbjct: 740 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL-----LKGNLAYVRS 794

Query: 599 ALCRG---ILPTTITWHILVRAV 618
               G   ++   ITW +L R V
Sbjct: 795 VDTSGMWNLIELDITWQLLERMV 817



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 215/435 (49%), Gaps = 13/435 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +  F+ A R    + + GLKPD ++Y  + + L K+G    A   +  +  +GV    
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTK 599

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K G+   A  + ER++ E    P+  TY+V+++ LCK  R +E L + D
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCT-PDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     +   F Y   I  + + G  + A+R+Y EM  SG    A TY   I+ +C+ G
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 718

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++  +L   M R+G   +VV+YNILI G    G +D A S  + +   +C  +  T+ 
Sbjct: 719 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 778

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+  L K       +  +  V+  G   L +      L+ RM KHG      T +SL+ 
Sbjct: 779 LLLKHLLKGN-----LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A +LE A  L   M  KG SP    Y  LI   C  + F +A SFV  M E G++P
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y LL+ GLC     +    L C  L+ G+  D   + IL  GL  AG V+   Q+ 
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 527 SNMKKRNCVPNLVTY 541
           S M+KR C  +  TY
Sbjct: 954 SIMEKRYCCISSQTY 968



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 242/531 (45%), Gaps = 38/531 (7%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ++FG     L +K + ++AK  LN +   GL P+V +Y ++I+G  KSG +  AL V   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G + N   YN L+ G  K     +A  +  ++  +  + PNV+TY  ++ G C   
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEH 546

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FD    +++ M++N  + D   Y      LCKAG    AE  Y  +V  G+ +  V Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYT 603

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +IDGF +AG       L E M  +GC  +  +Y++L+  L +  +++EA+ I + +  +
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
                   + +LI+ + + G  + A ++ NE+   G                 EGRL DA
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+ +M++ G   +  T N L++G      ++ A    K M    C P   +Y  L+  
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKH 783

Query: 443 LCK--------VERFGE--------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           L K        V+  G          +  ++ M++ G  P + TYS LI G C++ +++ 
Sbjct: 784 LLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 843

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L      KG +P+  +Y +LI   C     E AL   S M +    P L +Y  L+ 
Sbjct: 844 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           GL   GD +K   ++  +LE     D +++ I   GL     +   F+ L+
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 954


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Glycine max]
          Length = 1113

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 284/568 (50%), Gaps = 32/568 (5%)

Query: 80   IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGL 131
            I  YGK   P+KALD F++M +      I  C A +  L    +  +AK   N +   GL
Sbjct: 444  IDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGL 503

Query: 132  KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             PD  +Y  ++    K+G +  A  +  EM   G E +++  N LID  +K G   R  E
Sbjct: 504  SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAG---RVDE 560

Query: 192  IWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             W+    + +  + P VVTYN++I GL K G+  + L+++  MK++    ++ T+ + + 
Sbjct: 561  AWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
             LCK   V+ A +++  M       D +TYN +I G  + G+    F  +  M +    +
Sbjct: 621  CLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPD 680

Query: 310  VVSYNILIRGLLENGKVDEAISI-WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ-- 366
             V+   L+ G++++G+V++AI I  E + +      +   G L+  +     + +AI   
Sbjct: 681  HVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFA 740

Query: 367  ---ILNEVEEGG------------EGRLADAASLVNRMDKH-GCKLNAYTCNSLMNGFIQ 410
               + N + +              + +  DA  L ++  K  G      + N LM+G + 
Sbjct: 741  EGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLG 800

Query: 411  ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +  E A+ LF EM   GC P + +YN L++   K +R  E +    EML +G KP++IT
Sbjct: 801  CNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIIT 860

Query: 471  YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            ++++I+ L +S  I+ AL L  + +   F+P    Y  LI GL  AG+ E+A++++  M 
Sbjct: 861  HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920

Query: 531  KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
               C PN   YN L++G  K G+ + A +++  +++E +RPD+ SY I ++ L    R+ 
Sbjct: 921  DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980

Query: 591  DAFEFLNDALCRGILPTTITWHILVRAV 618
            DA  +  +    G+ P T+++++++  +
Sbjct: 981  DAVHYFEELKLTGLDPDTVSYNLMINGL 1008



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/617 (26%), Positives = 293/617 (47%), Gaps = 57/617 (9%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           LK+  +P++AL+ F   ++ P   H+P   +++L  L     V  ++ + +L++ Q    
Sbjct: 96  LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQ---- 151

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
                  VI     N  P+  L +F+ ++     + GI  R+  F      L  + + G 
Sbjct: 152 -------VI-----NRNPNTYLTIFKALS----IKGGI--RQAPFA-----LGKMRQAGF 188

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             + YSY  +I  L++ G    AL V+  M   G++ ++  Y+ L+    ++ D     +
Sbjct: 189 VLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMD 248

Query: 192 IWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           + E   MET  + PN+ TY + I  L + GR D+   +   M+      D  TY   I  
Sbjct: 249 LLEE--METLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLN 309
           LC AG ++ A+ +Y +M  S    D VTY  ++  F   G ++     W  M   G   +
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+Y IL+  L ++GKVD+A  + +++R +    +  T+  LI+GL     LN       
Sbjct: 367 VVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL-----LNLR----- 416

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   RL +A  L N M+  G    AY+    ++ + +    E A+  F++M ++G 
Sbjct: 417 --------RLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P++ + N  +  L ++ R  EA     ++   G  PD +TY++++    ++ +ID A K
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + L +G  PD+ + N LI  L  AG+V++A Q++  +K     P +VTYN L+ GL 
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLG 588

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL---- 605
           K G   KAL+++  + E    P+ +++N  L  LC     +DA +      CR  +    
Sbjct: 589 KEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK----NDAVDLALKMFCRMTIMNCS 644

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T++ ++  ++  G
Sbjct: 645 PDVLTYNTIIYGLIKEG 661



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 262/556 (47%), Gaps = 64/556 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A   L+ +  +G+ P++++Y T+I+GL+    L  AL +F+ M   GV   
Sbjct: 377 LCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPT 436

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y + ID + K GD  +A + +E++  +  + P++   N  +  L + GR  E  +++
Sbjct: 437 AYSYVLFIDYYGKLGDPEKALDTFEKM-KKRGIMPSIAACNASLYSLAEMGRIREAKDIF 495

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + +       DS TY   +    KAG ++ A ++  EM+  G   D +  N++ID   +A
Sbjct: 496 NDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKA 555

Query: 290 GKIKECFELWEVMGR----KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           G++ E    W++ GR    K    VV+YNILI GL + GK+ +A+ ++  ++E  C  ++
Sbjct: 556 GRVDEA---WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNT 612

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T   L++ LCKN  ++ A+++                    RM    C  +  T N+++
Sbjct: 613 VTFNALLDCLCKNDAVDLALKMFC------------------RMTIMNCSPDVLTYNTII 654

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG-- 463
            G I+  +   A + + +M +K  SP  V+  TL+ G+ K  R  +A   V E + +   
Sbjct: 655 YGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGL 713

Query: 464 ------WKPDM------------ITYS----------------LLINGLCQSKKIDMALK 489
                 W   M            I+++                 LI  LC+ KK   A K
Sbjct: 714 QTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKK 773

Query: 490 LCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           L  +F +  G  P    YN L+ GL      E AL+L+  MK   C PN+ TYN L+D  
Sbjct: 774 LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+   D+  E++N +L    +P+II++NI +  L   + ++ A +   + +     PT 
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893

Query: 609 ITWHILVRAVMNNGAS 624
            T+  L+  ++  G S
Sbjct: 894 CTYGPLIGGLLKAGRS 909



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 240/547 (43%), Gaps = 31/547 (5%)

Query: 79   VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
            +I   GK     KALD+F  M E  GC             LC+    + A +    +   
Sbjct: 583  LITGLGKEGKLLKALDLFGSMKES-GCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM 641

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
               PDV +Y T+I GL+K G    A   + +M +     +V  Y +L  G  K G    A
Sbjct: 642  NCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLL-PGVVKDGRVEDA 700

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +I    V ++ +  +   +  ++  +      +E +   + +  N   +D       I 
Sbjct: 701  IKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIR 760

Query: 250  GLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
             LCK      A++++ +  +S G      +YN ++DG       +   +L+  M   GC 
Sbjct: 761  VLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820

Query: 308  LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             N+ +YN+L+    ++ ++DE   ++  +  + C  +  TH ++I+ L K+  +NKA+ +
Sbjct: 821  PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 368  LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
              E+  G                   C     T   L+ G ++A + E A+ +F+EM   
Sbjct: 881  YYEIISGD-------------FSPTPC-----TYGPLIGGLLKAGRSEEAMKIFEEMPDY 922

Query: 428  GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
             C P    YN LING  K      A    K M+++G +PD+ +Y++L+  L  + ++D A
Sbjct: 923  QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982

Query: 488  LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +    +    G  PD   YN++I+GL  + ++E+AL L+S MK R   P L TYN L+  
Sbjct: 983  VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILH 1042

Query: 548  LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
                G  D+A +++  +    L P++ +YN  ++G         AF      +  G  P 
Sbjct: 1043 FGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPN 1102

Query: 608  TITWHIL 614
              T+  L
Sbjct: 1103 AGTFAQL 1109



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 25/372 (6%)

Query: 109  ILCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +LC++++   AK+  +   +  G  P   SY  +++GL+       AL +F EM   G  
Sbjct: 761  VLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDEC 225
             N+  YN+L+D     G   R  E++E    ++     PN++T+N++I+ L K    ++ 
Sbjct: 821  PNIFTYNLLLDA---HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 226  LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            L+++  +   +      TY   I GL KAG  E A +++ EM +     +   YN +I+G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 286  FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            F +AG +    +L++ M ++G   ++ SY IL+  L   G+VD+A+  +E L+    + D
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 345  STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            + ++ ++INGL                  G   RL +A SL + M   G     YT N+L
Sbjct: 998  TVSYNLMINGL------------------GKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039

Query: 405  MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
            +  F  A  ++ A  +F+E+   G  P V +YN LI G  K      A+S  K+M+  G 
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099

Query: 465  KPDMITYSLLIN 476
             P+  T++ L N
Sbjct: 1100 SPNAGTFAQLPN 1111


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 259/527 (49%), Gaps = 41/527 (7%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
               A+RF +S+   G+ P+VY+Y  +I  L   G    AL++  +M   G   NVV YN
Sbjct: 130 SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 189

Query: 175 ILIDGFFKKGDYMRAKEIWERLV---METSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            L+  FF+ G+   A    ERLV   ++  + PN+VT+N M+NG+CK G+ ++  +++D 
Sbjct: 190 TLVAAFFRAGEVDGA----ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 245

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +     D  +Y + + G CKAG    A  V+ EM + GI  D VT+ ++I   C+AG 
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++    L   M  +G  +N V++  LI G  + G +D+A+     +R+         +  
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LING C  G +++A ++L+E                  M+  G K +  T +++++ + +
Sbjct: 366 LINGYCMVGRMDEARELLHE------------------MEAKGLKPDVVTYSTIISAYCK 407

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                +A  L ++M  KG  P  ++Y++LI  LC+ +R  +A+   K M++ G +PD  T
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI+G C+   ++ AL L  + ++ G  PDV  Y++LI+GL  + +  +A QL   + 
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527

Query: 531 KRNCVPNLVTYNTLM---------------DGLFKTGDCDKALEIWNHILEERLRPDIIS 575
               +P    Y+ LM                G    G  ++A +++  +L+     D   
Sbjct: 528 HEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 587

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y++ + G C    +  A  F    L RG  P + +   L+R +  NG
Sbjct: 588 YSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENG 634



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 233/433 (53%), Gaps = 21/433 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G   +V+ YN ++           A+  ++ + +   V PNV TYN++I  LC  G   E
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSM-LSDGVAPNVYTYNILIRALCGRGHRKE 168

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L +   M+      +  TY + +    +AG V+GAER+   M++ G+  + VT+N+M++
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+AGK+++  ++++ M R+G   + VSYN L+ G  + G   EA+S++  + +K    
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T   LI+ +CK G L  A+                  +LV +M + G ++N  T  +
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAV------------------TLVRQMRERGLQMNEVTFTA 330

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF +   L++A+   + M +    P+VV YN LING C V R  EA   + EM  KG
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            KPD++TYS +I+  C++     A +L  Q L+KG  PD   Y+ LI  LC   ++ DA 
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+ NM K    P+  TY +L+DG  K G+ ++AL + + +++  + PD+++Y++ + GL
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510

Query: 584 CSCSRMSDAFEFL 596
              +R  +A + L
Sbjct: 511 SKSARAMEAQQLL 523



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 245/491 (49%), Gaps = 38/491 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +   ++A   L  +   G  P+V +Y T++    ++G++ GA  +   M + G++ N
Sbjct: 160 LCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPN 219

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V +N +++G  K G    A+++++ + M   + P+ V+YN ++ G CK G   E L ++
Sbjct: 220 LVTFNSMVNGMCKAGKMEDARKVFDEM-MREGLAPDGVSYNTLVGGYCKAGCSHEALSVF 278

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  T+ S IH +CKAGN+E A  + R+M E G+ ++ VT+ A+IDGFC+ 
Sbjct: 279 AEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338

Query: 290 GKIKECFELWEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           G + +   L  V G + C    +VV YN LI G    G++DEA  +   +  K    D  
Sbjct: 339 GFLDDA--LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 396

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  +I+  CKN   + A ++  ++ E G                 E RL+DA  L   M
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K G + + +T  SL++G  +   +E A+ L  +M + G  P VV+Y+ LINGL K  R 
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLIN---------------GLCQSKKIDMALKLCCQF 494
            EA   + ++  +   P    Y  L++               G C    ++ A K+    
Sbjct: 517 MEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 576

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L + +  D ++Y++LIHG C AG V  AL  +  M +R   PN  +  +L+ GLF+ G  
Sbjct: 577 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMV 636

Query: 555 DKALEIWNHIL 565
            +A ++   +L
Sbjct: 637 VEADQVIQQLL 647



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 20/349 (5%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G     + YNA++     A  +      ++ M   G   NV +YNILIR L   G   EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +SI   +R   C  +  T+  L+    + G ++ A +++  + +GG              
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG-------------- 215

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
                K N  T NS++NG  +A K+E+A  +F EM R+G +P  VSYNTL+ G CK    
Sbjct: 216 ----LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA S   EM +KG  PD++T++ LI+ +C++  ++ A+ L  Q  ++G   +   +  L
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G C  G ++DAL     M++    P++V YN L++G    G  D+A E+ + +  + L
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +PD+++Y+  +   C       AFE     L +G+LP  IT+  L+R +
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 440



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 214/434 (49%), Gaps = 11/434 (2%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C+     +A      + +KG+ PDV ++ ++I+ + K+G+L  A+ +  +M ERG++
Sbjct: 263 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQ 322

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V +  LIDGF KKG ++    +  R + +  + P+VV YN +ING C  GR DE  E
Sbjct: 323 MNEVTFTALIDGFCKKG-FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARE 381

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   M+    + D  TY + I   CK  +   A  + ++M+E G+  DA+TY+++I   C
Sbjct: 382 LLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 441

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
              ++ +   L++ M + G   +  +Y  LI G  + G V+ A+S+ + + +     D  
Sbjct: 442 EEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVV 501

Query: 347 THGVLINGLCKNGYLNKAIQILNEV--EEGGEGRLADAASLVNRMDKHGC-KLNAYTCNS 403
           T+ VLINGL K+    +A Q+L ++  EE         A +      H C K    +  +
Sbjct: 502 TYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM------HCCRKAELKSVLA 555

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ GF     +  A  +++ M  +  +     Y+ LI+G C+     +A SF K+ML++G
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P+  +   LI GL ++  +  A ++  Q L      D      LI    + G V+  L
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675

Query: 524 QLYSNMKKRNCVPN 537
            +   M K   +P+
Sbjct: 676 DVLHGMAKDGLLPS 689



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 109/211 (51%)

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           + L +A   F  M   G +P V +YN LI  LC      EA S +++M   G  P+++TY
Sbjct: 129 ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTY 188

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L+    ++ ++D A +L    L  G  P++  +N +++G+C AGK+EDA +++  M +
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P+ V+YNTL+ G  K G   +AL ++  + ++ + PD++++   +  +C    +  
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   +     RG+    +T+  L+      G
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 30/307 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I AY KN     A ++ Q+M E         +     +LC +++   A     ++ + 
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL 459

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL+PD ++Y ++I+G  K G++  AL++ D+M + GV  +VV Y++LI+G  K    M A
Sbjct: 460 GLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 519

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++  +L  E  +  N                       +D +    R+ +  +  + + 
Sbjct: 520 QQLLFKLYHEEPIPANT---------------------KYDALMHCCRKAELKSVLALLK 558

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
           G C  G +  A++VY+ M++    +D   Y+ +I G CRAG + +     + M ++G   
Sbjct: 559 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAP 618

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  S   LIRGL ENG V EA  + + L      AD+     LI+     G ++  + +L
Sbjct: 619 NSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVL 678

Query: 369 NEVEEGG 375
           + + + G
Sbjct: 679 HGMAKDG 685



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 1/162 (0%)

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G+ P ++ Y+ ++  L  +  +  A +     L  G  P+V  YNILI  LC  G  ++A
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L +  +M+   C PN+VTYNTL+   F+ G+ D A  +   +L+  L+P+++++N  + G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +C   +M DA +  ++ +  G+ P  ++++ LV      G S
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 303/641 (47%), Gaps = 37/641 (5%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L   + P   L LF    +E GY  + HLF  ++R       V     +L+  E++
Sbjct: 201 LIGALSEVREPDPMLILFHQ-MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLD--EMK 257

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
                 D+ L    I  +GK    D +   F  M           +    G+LC+  + +
Sbjct: 258 SNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLD 317

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A      L +    P  Y+Y T+I G   +G    A  + +    +G   +V+ YN ++
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 377

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
               KK     A  I+E   M+    PNV TYN++I+ LC+ G+ +  LE+ D M++   
Sbjct: 378 TCLGKKRRVEEALRIFEE--MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGL 435

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             +  T    I  LCKA  +E A  ++  M +     +AVT++++IDG  + G++ + + 
Sbjct: 436 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 495

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+E M   G +   + Y  LIR   + G+ ++   I++ +    C+ D T     ++ + 
Sbjct: 496 LYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF 555

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADA------------ASLVNR-------MDKHGCKLN 397
           K G   K   +  E+     G + DA            A L N        M + GC L+
Sbjct: 556 KAGETEKGRALFREI--NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLD 613

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +  N++++GF ++ K+  A  L +EM  KG  PTVV+Y ++I+GL K++R  EAY   +
Sbjct: 614 THAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 673

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           E    G K +++ YS LI+G  +  +ID A  +  + +QKG TP+V  +N L+  L  A 
Sbjct: 674 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 733

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++ +AL  + +MK   C PN +TY+ L++GL +    +KA   W  + +  L+P+ I+Y 
Sbjct: 734 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 793

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             + GL     + +A    +     G +P + +++ ++  +
Sbjct: 794 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 834



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 277/552 (50%), Gaps = 33/552 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  YG     D+A  + +R            + C    L +KR+ E+A R    +   
Sbjct: 340 TMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD 399

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+V +Y  +I+ L + G L  AL + D+M   G+  NV+  NI+ID   K      A
Sbjct: 400 AV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 458

Query: 190 KEIWERLVMETSV-YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             I+E   M+  V  PN VT++ +I+GL KCGR D+   ++++M        +  Y S I
Sbjct: 459 CSIFEG--MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
               K G  E   ++Y+EMV +G   D    N  +D   +AG+ ++   L+  +   G +
Sbjct: 517 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +  SY+ILI GL++ G  +E   ++  ++E+ C  D+  +  +I+G CK+G +NKA Q+
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L E                  M   G      T  S+++G  +  +L+ A  LF+E    
Sbjct: 637 LEE------------------MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 678

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G    VV Y++LI+G  KV R  EAY  ++E+++KG  P++ T++ L++ L ++++I+ A
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738

Query: 488 LKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           L +C Q ++     P+   Y+ILI+GLC   K   A   +  M+K    PN +TY T++ 
Sbjct: 739 L-ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS 797

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G+  +A  +++        PD  SYN  ++GL S ++  DA+    +   +G   
Sbjct: 798 GLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNI 857

Query: 607 TTITWHILVRAV 618
            T T  +L+ A+
Sbjct: 858 HTKTCVVLLDAL 869



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 175/675 (25%), Positives = 310/675 (45%), Gaps = 69/675 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +LK  K+ +TA+  F  A ++    H P  ++ +L  +       H+ RILE + + 
Sbjct: 95  VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLS 154

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
                 ++++ ++    K+    +A D+ Q M +         +    G L   R+ +  
Sbjct: 155 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPM 214

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
               + + E G + +V+ + T+I    + G +  AL++ DEM    ++ ++V YN+ ID 
Sbjct: 215 LILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDC 274

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G    + + +  +     + P+ VTY  MI  LCK  R DE +E+++++++N +  
Sbjct: 275 FGKAGKVDMSWKFFHEM-KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVP 333

Query: 240 DSFTYCSFIHGLCKAGN-----------------------------------VEGAERVY 264
            ++ Y + I G   AG                                    VE A R++
Sbjct: 334 CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF 393

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            EM    +  +  TYN +ID  CR GK+    E+ + M R G   NV++ NI+I  L + 
Sbjct: 394 EEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKA 452

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------- 376
            K++EA SI+E + +K C  ++ T   LI+GL K G ++ A  +  ++ + G        
Sbjct: 453 QKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVY 512

Query: 377 ----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR  D   +   M   GC  +    N+ M+   +A + E    LF+E++ 
Sbjct: 513 TSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINA 572

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P   SY+ LI+GL K     E Y     M E+G   D   Y+ +I+G C+S K++ 
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +L  +   KG  P V  Y  +I GL    ++++A  L+   K      N+V Y++L+D
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA---FEFLNDALCRG 603
           G  K G  D+A  I   ++++ L P++ ++N  L  L     +++A   F+ + D  C  
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP- 751

Query: 604 ILPTTITWHILVRAV 618
             P  IT+ IL+  +
Sbjct: 752 --PNQITYSILINGL 764



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 10/252 (3%)

Query: 378 RLADAASLVN-------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           RL DA + VN       + +K  C   AY  NSL+    + ++ ++   + +EMS  G  
Sbjct: 101 RLKDANTAVNYFQWAEKQTEKVHCP-EAY--NSLLMVMARNTEFDHLERILEEMSLSGFG 157

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P+      L+    K  +  EA+  ++ M +  ++P    Y++LI  L + ++ D  L L
Sbjct: 158 PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             Q  + G+  +V ++  LI      G+V+ AL L   MK  +   ++V YN  +D   K
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D + + ++ +    L PD ++Y   +  LC  +R+ +A E          +P    
Sbjct: 278 AGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA 337

Query: 611 WHILVRAVMNNG 622
           ++ ++    + G
Sbjct: 338 YNTMIMGYGSAG 349


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 255/510 (50%), Gaps = 20/510 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CRK      +  L+ + +   +P+ ++Y  VIN     G    ALA F+ M ERG    
Sbjct: 276 FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 335

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +N +I+ F K+G+ + A+++++ L  E    PN + YN ++NG  K    D+   ++
Sbjct: 336 VVTFNTVINAFCKEGNVVEARKLFDGL-KEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+K     D  T+   + G  K G  E  +R+ +++   G+  D   ++  + G C A
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  E    M  KG   +++++N +I    + G  D+A   ++L+         +T 
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 514

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ GL  NG                  RL +A  L+ +M + G  +N      L++ F
Sbjct: 515 SSLLMGLSING------------------RLQEATELIGQMIEKGLSVNNMAFTVLLDKF 556

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A  L+ EM R+G  P VV+++  I+GL K     EAY+   EML KG  P+ 
Sbjct: 557 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 616

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C+  K++ ALKL      +G  PD+   N++I GLC  G++  A+ ++ +
Sbjct: 617 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 676

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    P+++TYNTL++G  K  D   A  + N +      PD+ +YNI + G CS  R
Sbjct: 677 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           M+ A   L++ +  GI+P T+T++ ++  V
Sbjct: 737 MNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 27/479 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++    +A++  + L E G  P+   Y T++NG VK  ++  A  +++EM ++G+  +
Sbjct: 346 FCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPD 405

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSV---YPNVVTYNVMINGLCKCGRFDECL 226
            + +NIL+ G +K G     +E  +RL+ + SV    P+   +++ ++GLC  GR DE +
Sbjct: 406 GITFNILVSGHYKYG----REEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 461

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E    M +         + S I    +AG  + A   Y+ MV  G+     T ++++ G 
Sbjct: 462 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL 521

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
              G+++E  EL   M  KG  +N +++ +L+    + G V  A S+W  +  +    D 
Sbjct: 522 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 581

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNR 388
                 I+GL K G + +A  +  E+   G                  G+L +A  L   
Sbjct: 582 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 641

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   + +T N ++ G  +  ++ +AI +F +M + G SP +++YNTLING CK   
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A + V  M   G  PD+ TY++ I+G C S++++ A+ +  + +  G  P+   YN 
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           +++G+CS   ++ A+ L + + K   VPN+VT N L+   +K G  ++ L +W H L E
Sbjct: 762 MLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTL-MWGHKLSE 818



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 221/472 (46%), Gaps = 24/472 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNV 211
           AL +   M E GV  +     IL     + GDY     +W+    V+     P   T++ 
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDY---GNVWKLFKDVIRRGPQPCKYTFSG 271

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I G C+ G       +   M K   E ++F Y   I+  C  G    A   +  M+E G
Sbjct: 272 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 331

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
                VT+N +I+ FC+ G + E  +L++ +   G   N + YN L+ G ++  ++D+A 
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            ++E +R+K    D  T  +L++G  K G            EE G+  L D + L    D
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGR-----------EEDGDRLLKDISVLGLLPD 440

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +    ++       ++G   A +L+ A+    +M  KG SP+++++N++I    +     
Sbjct: 441 RSLFDIS-------VSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+   K M+  G  P   T S L+ GL  + ++  A +L  Q ++KG + +   + +L+
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 553

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
                 G V  A  L+  M++R   P++V ++  +DGL K G  ++A  ++  +L + L 
Sbjct: 554 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 613

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P+  +YN  + G C C ++++A +       RG+LP   T ++++  +   G
Sbjct: 614 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 665



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 229/518 (44%), Gaps = 67/518 (12%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   ++N    E N   A  LFD   +E G++ +  +++ ++   +  + +   + + 
Sbjct: 336 VVTFNTVINAFCKEGNVVEARKLFD-GLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 62  ELIEIQKCYCPEDVALSVIQA----YGKNSMPDKALDVFQRMN-----EIFGCEAGILCR 112
           E +  +K   P+ +  +++ +    YG+    D+ L     +       +F      LC 
Sbjct: 395 EEMR-KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 453

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN----------------------------- 143
             + ++A  FL  + EKGL P + ++ +VI                              
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 513

Query: 144 ------GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
                 GL  +G L  A  +  +M E+G+  N + + +L+D FFK+GD + A+ +W  + 
Sbjct: 514 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM- 572

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               ++P+VV ++  I+GL K G  +E   ++  M +     ++F Y S I G CK G +
Sbjct: 573 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 632

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A ++ + M   G+  D  T N +I G C+ G+++    ++  M + G   ++++YN L
Sbjct: 633 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 692

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I G  +   +  A ++   +     N D TT+ + I+G C +  +N+A+ +L+E+     
Sbjct: 693 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA-- 750

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                           G   N  T NS++NG + +  L+ A+ L   + +    P VV+ 
Sbjct: 751 ----------------GIVPNTVTYNSMLNG-VCSDILDRAMILTARLLKMAFVPNVVTA 793

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           N L++   K         +  ++ E  +  D ITY ++
Sbjct: 794 NLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 163/350 (46%), Gaps = 29/350 (8%)

Query: 281 AMIDGFCRAGKIKEC-FELWEVMGRKGCLNV----VSYNILIRGLLENGKVDEAISIWEL 335
           +++D   RA    E  F+  E++GR   + V        IL + LL   +V +  ++W+L
Sbjct: 197 SVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLL---RVGDYGNVWKL 253

Query: 336 LRE---KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            ++   +       T   +I G C+ G ++            GE       SL++ M K 
Sbjct: 254 FKDVIRRGPQPCKYTFSGIILGFCRKGCIHL-----------GE-------SLLHLMPKF 295

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C+ NA+  N ++N      +  +A+  F  M  +GC+PTVV++NT+IN  CK     EA
Sbjct: 296 HCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEA 355

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 + E G+ P+ I Y+ L+NG  + ++ID A  L  +  +KG  PD   +NIL+ G
Sbjct: 356 RKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSG 415

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
               G+ ED  +L  ++     +P+   ++  + GL   G  D+A+E    +LE+ L P 
Sbjct: 416 HYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPS 475

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           II++N  +           AFE     +  G+ P+  T   L+  +  NG
Sbjct: 476 IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSING 525



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 38/214 (17%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC++ +   A      + + GL PD+ +Y T+ING  K+ D++ A  + + M+  G  
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLV------------------------------ 197
            ++  YNI I GF       RA  + + LV                              
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILT 778

Query: 198 ---METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
              ++ +  PNVVT N++++   K G  +  L    ++ +     D  TY      + KA
Sbjct: 779 ARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITY----KIMDKA 834

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            ++       R      +F+D + Y    D FCR
Sbjct: 835 HHILEDADFSRVTSAKSLFLDFLMY-ITYDYFCR 867


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 252/513 (49%), Gaps = 23/513 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+    +A R+L+ +   G +PD Y++ ++I G  ++  +  A  +FD+M  RG   +
Sbjct: 163 LCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQD 222

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  + G    A E++  +       P++  Y  ++ GLC   R +E L M 
Sbjct: 223 VVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCNAERGEEGLLML 277

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RMK+      +  Y + +   C+    + AE + +EM E G+    VT  A+I+ +C+ 
Sbjct: 278 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 337

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +   + E+M  +GC  NV +YN L++G    GKV +A+++   +R    N D+ T+
Sbjct: 338 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 397

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +LI G C +G++  A ++L  +E  G                 +GR   A SL + ++ 
Sbjct: 398 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K NA T NSL+NG  ++ K + A    ++M   GC+P   +Y++ I  LCK++   E
Sbjct: 458 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 517

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
             SF+ EML+K  KP  + Y+++I+ L + +   +  +   + +  G  PDV  Y   + 
Sbjct: 518 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 577

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++ +A  +   M K     + + YNTLMDG    G  D A+ I   +      P
Sbjct: 578 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 637

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +  +Y I L+ L     + D        + + I
Sbjct: 638 NQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 670



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 226/484 (46%), Gaps = 24/484 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P   +Y  VI  L +  DL  AL     M   G   +   +N LI G+ +      A+++
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           ++++ +      +VV+Y  +I GLC+ GR DE +E++  M     + D   Y + + GLC
Sbjct: 211 FDKMPLR-GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLC 265

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-VV 311
            A   E    + R M E G       Y A++D  CR  K KE  E+ + M  KG    VV
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +   +I    + G++ +A+ + EL++ + C  +  T+  L+ G C  G ++KA+      
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM------ 379

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                       +L+N+M   G   +A T N L+ G      +E+A  L + M   G   
Sbjct: 380 ------------TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 427

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +YN LIN LCK  R  +A S    +  +G KP+ +T++ LINGLC+S K D+A K  
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G TPD   Y+  I  LC     ++ L     M +++  P+ V Y  ++  L K 
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            +       W  ++     PD+++Y  +++  C   R+++A   L +    G+   T+ +
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607

Query: 612 HILV 615
           + L+
Sbjct: 608 NTLM 611



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 22/395 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I  LC+  ++  A R    MV SG   DA T+N++I G+CR  ++    +L++ M
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G   +VVSY  LI GL E G++DEA+   EL  E +   D   +  L+ GLC     
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAV---ELFGEMD-QPDMHMYAALVKGLCNAERG 270

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            + + +L  ++E G                 E +  +A  ++  M + G      TC ++
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +N + +  ++ +A+ + + M  +GC P V +YN L+ G C   +  +A + + +M   G 
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD +TY+LLI G C    I+ A +L       G   D   YN LI+ LC  G+ + A  
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 450

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+ +++ R   PN VT+N+L++GL K+G  D A +    ++     PD  +Y+  ++ LC
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                 +   F+ + L + + P+T+ + I++  ++
Sbjct: 511 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 545



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 252/569 (44%), Gaps = 83/569 (14%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++ L + +RM E+        +       CR+R+ ++A+  L  ++EKGL P V +   V
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   K G +  AL V + M  RG + NV  YN L+ GF  +G   +A  +  ++     
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACG 389

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V P+ VTYN++I G C  G  +    +   M+ +    D +TY + I+ LCK G  + A 
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            ++  +   GI  +AVT+N++I+G C++GK    ++  E M   GC  +  +Y+  I  L
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509

Query: 321 --------------------LENGKVDEAISIWELLREKN---------------CNADS 345
                               ++   V+  I I +LL+E+N               CN D 
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNR 388
            T+   +   C  G LN+A  +L E+ + G                  G+   A S++ +
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629

Query: 389 MDKHGCKLNAYTCNSLMN-----------------GFIQASKLENAIFLFKEMSRKGCSP 431
           M       N +T   L+                  G  +A +L +   LF  M +    P
Sbjct: 630 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 689

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +Y++++ G  +  R  EA S V  M E     +   Y+ L+   C+SK+   A  L 
Sbjct: 690 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 749

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
           C  +Q GF P +  Y  L+ GL   G+ + A +++ N + ++  P+ + +  ++DGL K 
Sbjct: 750 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 809

Query: 552 GDCDKALEIWNHILEERL--RPDIISYNI 578
           G  D + E+   I+ ER+  RP   +Y +
Sbjct: 810 GHSDISREMI--IMLERMNCRPSHQTYAM 836



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 223/499 (44%), Gaps = 11/499 (2%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL-------- 110
           R+LEL++++ C        +++Q +       KA+ +  +M         +         
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     E A R L  +   GL  D Y+Y  +IN L K G    A ++FD +  RG++ N 
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LI+G  K G    A +  E++V      P+  TY+  I  LCK     E L    
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMV-SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 523

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M + + +  +  Y   IH L K  N     R + EMV SG   D VTY   +  +C  G
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 583

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E   +   M + G  ++ ++YN L+ G    G+ D A+SI + +       +  T+ 
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 643

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+  L +   +   +  L          L D   L + M K+    N+ T +S++ GF 
Sbjct: 644 ILLRHLVRMRLVEDVLP-LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  + E A  L   M     S     Y  L+   CK +R+ +A+  V  M++ G+ P ++
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 762

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y  L++GL    + D A ++      K ++PD  ++ ++I GL   G  + + ++   +
Sbjct: 763 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIML 822

Query: 530 KKRNCVPNLVTYNTLMDGL 548
           ++ NC P+  TY  L + L
Sbjct: 823 ERMNCRPSHQTYAMLTEEL 841



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 161/350 (46%), Gaps = 23/350 (6%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
           A TYNA+I   CR   +        +M R G   +  ++N LI G     +VD A  +++
Sbjct: 153 APTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFD 212

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  +    D  ++  LI GLC+ G +++A+++  E                  MD+   
Sbjct: 213 KMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGE------------------MDQPDM 254

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
            + A    +L+ G   A + E  + + + M   G  P+  +Y  +++  C+  +  EA  
Sbjct: 255 HMYA----ALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEE 310

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            ++EM EKG  P ++T + +IN  C+  ++  AL++      +G  P+V  YN L+ G C
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           + GKV  A+ L + M+     P+ VTYN L+ G    G  + A  +   +  + L  D  
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +YN  +  LC   R   A    +    RGI P  +T++ L+  +  +G +
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 417 AIFLFKEMSRKGC-SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           A+ LF  M R    +PT  +YN +I  LC+      A  ++  M+  GW+PD  T++ LI
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G C++ ++D+A  L  +   +GF  DV  Y  LI GLC AG++++A++L+  M +    
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---- 251

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P++  Y  L+ GL      ++ L +   + E   RP   +Y   +   C   +  +A E 
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 311

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L +   +G+ P  +T   ++ A    G
Sbjct: 312 LQEMFEKGLAPCVVTCTAVINAYCKEG 338


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 248/499 (49%), Gaps = 30/499 (6%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           E G+    +  G +I  L ++        +F EM + G        N L+ G  ++G++ 
Sbjct: 263 EHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFN 322

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--------EK 239
           R  E+ E++V E  + PNVVT+ ++IN +CK  R D+ LE+ ++M   +         E 
Sbjct: 323 RMNELMEKMV-EMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEP 381

Query: 240 DSFTYCSFIHGLCKAG-NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           D   Y + I GLCK G   EG   + R   + G   D +TYN +IDGFC+AG+I++  EL
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           ++ M ++G   NVV+ N L+ G+   G+V  A++ +   + +    D+ T+  LIN  C 
Sbjct: 442 FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCN 501

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                KA+++ NE                  M K GC  +A    +L++GF QA ++ +A
Sbjct: 502 VNNFEKAMELFNE------------------MLKSGCSPDAIVYYTLISGFSQAGRMADA 543

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
            F+  E+ + G  P  V YNTLI G C+  +F   +  +KEM E G KPD ITY+ LI  
Sbjct: 544 SFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAY 603

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP- 536
             ++  +  A K+  + ++ G  P V  Y  +I+  C  G   +A++++ +MK  + VP 
Sbjct: 604 ASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPP 663

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N V YN L++ L K      A+ +   +    + P+  +YN   KGL     +   FEF+
Sbjct: 664 NTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFM 723

Query: 597 NDALCRGILPTTITWHILV 615
           +  +     P  IT  IL 
Sbjct: 724 DRMIEHACNPDYITMEILT 742



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 234/497 (47%), Gaps = 28/497 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR R+  +       + + G   +  +  +++ GL + G+      + ++M E  ++ N
Sbjct: 280 LCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPN 339

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------METSVYPNVVTYNVMINGLCKCGRF 222
           VV + ILI+   K      A E+ E++        +  SV P+VV YN +I+GLCK GR 
Sbjct: 340 VVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQ 399

Query: 223 DECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            E L + +RM+  +    D+ TY   I G CKAG +E  + ++ EM + G+  + VT N 
Sbjct: 400 QEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNT 459

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++ G CR G++      +    R+G   + V+Y  LI         ++A+ ++  + +  
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C+ D+  +  LI+G  +                   GR+ADA+ ++  + K G + +   
Sbjct: 520 CSPDAIVYYTLISGFSQ------------------AGRMADASFVLAELKKLGIRPDTVC 561

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+L+ GF + +K      + KEM   G  P  ++YNTLI    K      A   +++M+
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF-LQKGFTPDVTMYNILIHGLCSAGKV 519
           + G  P + TY  +IN  C +   + A+++           P+  +YNILI+ LC   KV
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKV 681

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A+ L  +MK     PN  TYN +  GL    D +K  E  + ++E    PD I+  I 
Sbjct: 682 KSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741

Query: 580 LKGLCSCSRMSDAFEFL 596
            + L +   +    +F+
Sbjct: 742 TEWLSAVGEIERLKKFV 758



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 241/514 (46%), Gaps = 43/514 (8%)

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
           L++SG +  AL V DEMFE   ++N    +   D  F    ++  +E  E L+ E  +  
Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILF---SFLLKRERNEELLSEDEIVN 256

Query: 205 NVVTYN------------VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            V+ +              +I  LC+  + +   +++  M K     +S    S + GL 
Sbjct: 257 LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG---RKGCL- 308
           + GN      +  +MVE  I  + VT+  +I+  C+  ++ +  E+ E M      G + 
Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 376

Query: 309 -----NVVSYNILIRGLLENGKVDEAISIWELLR-EKNCNADSTTHGVLINGLCKNGYLN 362
                +VV YN LI GL + G+  E + + E +R +K C  D+ T+  LI+G CK G + 
Sbjct: 377 VSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           K  ++ +E+ + G                  GR++ A +      + G K +A T  +L+
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           N F   +  E A+ LF EM + GCSP  + Y TLI+G  +  R  +A   + E+ + G +
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD + Y+ LI G C++ K     ++  +  + G  PD   YN LI      G ++ A ++
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKV 616

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI-LEERLRPDIISYNITLKGLC 584
              M K   VP + TY  +++     G+ ++A+EI+  +    ++ P+ + YNI +  LC
Sbjct: 617 MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLC 676

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +++  A   + D    G+ P T T++ + + +
Sbjct: 677 KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 155/341 (45%), Gaps = 45/341 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           ++I    K     + L + +RM    GC    +         C+  + EK K   + + +
Sbjct: 388 TLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNK 447

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+ P+V +  T++ G+ ++G +  A+  F E   RG++ + V Y  LI+ F    ++ +
Sbjct: 448 EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEK 507

Query: 189 AKEIWERL----------------------------------VMETSVYPNVVTYNVMIN 214
           A E++  +                                  + +  + P+ V YN +I 
Sbjct: 508 AMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIG 567

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           G C+  +F    EM   M++   + D+ TY + I    K G+++ A++V R+M+++G+  
Sbjct: 568 GFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISI 332
              TY A+I+ +C  G   E  E+++ M    K   N V YNILI  L +N KV  A+S+
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSL 687

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            E ++      ++TT+  +  GL     L K  + ++ + E
Sbjct: 688 MEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 87/186 (46%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  CR  +F +    L  + E GLKPD  +Y T+I    K+GDL  A  V  +M + GV 
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             V  Y  +I+ +   G+   A EI++ +   + V PN V YN++IN LCK  +    + 
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + + MK      ++ TY +   GL    ++E        M+E     D +T   + +   
Sbjct: 687 LMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLS 746

Query: 288 RAGKIK 293
             G+I+
Sbjct: 747 AVGEIE 752


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 267/542 (49%), Gaps = 28/542 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRK--RQFEKAKRFLN--SLWEK----GLKPDVYSYGTV 141
           D AL  F RM  +    + +   K      K KR+    SL  K    G+  +VY+   +
Sbjct: 56  DDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVL 115

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN       +  A +V  ++ + G + +   +  LI G   +G    A  ++++++ E  
Sbjct: 116 INSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE-G 174

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+VV Y  +INGLCK G     + +   M+K   + D   Y + IH LCK      A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ EM+  GI  + VT N+++   C  G+ K    L  E++  K   N +S   ++  L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V +A  + +++ +     D  T+  LI+G C    +++A+++ +           
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD----------- 343

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   GC  N ++ N+L+NG+ +  +++ A++LF+EM R+   P  V+YNTLI
Sbjct: 344 -------MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC V R  +A +  +EM+  G  PD++TY +L++ LC++  +D A+ L          
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +Y I+I G+C AG++EDA  L+SN+  +   PN+ TYN +  GL K G  D+A ++
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  + E     D  +YN   +G    +  S A + L + L RG      T  +LV  + +
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576

Query: 621 NG 622
           +G
Sbjct: 577 DG 578



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 220/462 (47%), Gaps = 46/462 (9%)

Query: 8   LLNLLKAEKNPHTA--LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV---------- 55
           L  +LK    P TA    L      E     + HLF  ++     P +V+          
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 56  --HVSRILELI-EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM------NEIFG 104
             H S  + L+  ++K  C  DV +  ++I +  K+    +A ++F  M        I  
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 105 CEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           C + +  LC   +++     LN + +  + P+  S  TV++ L K G +  A  V D MF
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + GVE +VV Y  LIDG   + +   A ++++ +V      PNV +YN +ING CK  R 
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV-HKGCAPNVFSYNTLINGYCKIERM 370

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+ + +++ M + +   ++ TY + IHGLC  G ++ A  ++REMV  G   D VTY  +
Sbjct: 371 DKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRIL 430

Query: 283 IDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +D  C+   + +   L + + G     ++  Y I+I G+   G++++A  ++  L  K  
Sbjct: 431 LDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGL 490

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  T+ ++ +GLCK G L++A ++  E                  MD++ C  +  T 
Sbjct: 491 KPNVWTYNIMTHGLCKRGLLDEATKLFME------------------MDENACSADGCTY 532

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           N++  GF++ ++   AI L +EM  +G S   VS  TL+ G+
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLVGM 573



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 122/244 (50%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +      ++    +  +    + L ++M   G    V + N 
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R   A+S + ++L+ G +PD  +++ LI GLC   +I  AL L  + + +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F PDV +Y  LI+GLC  G    A++L  +M+K NC P++V Y TL+  L K     +A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + P+I++ N  +  LC+          LN+ +   I+P  I+   +V A+
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 619 MNNG 622
              G
Sbjct: 295 CKEG 298



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 113/221 (51%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N   + ++  + L++A+  F  M      P++V +  ++  + KV+R+    S  ++M  
Sbjct: 43  NRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDS 102

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G   ++ T ++LIN  C   +++ A  +  + L+ G  PD   +  LI GLC  G++ +
Sbjct: 103 FGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGE 162

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      P++V Y TL++GL KTG    A+ +   + +   +PD++ Y   + 
Sbjct: 163 ALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIH 222

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            LC   + + AF   ++ + +GI P  +T + LV A+ N G
Sbjct: 223 SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLG 263



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 11/261 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           ++I  +   S  D+A+ VF  M    GC   +          C+  + +KA      +  
Sbjct: 324 ALIDGHCLRSEMDEAVKVFDMMVHK-GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           + L P+  +Y T+I+GL   G L  A+A+F EM   G   ++V Y IL+D   K     +
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +  + +  +++ P++  Y ++I+G+C+ G  ++  +++  +     + + +TY    
Sbjct: 443 AMALL-KAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMT 501

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLCK G ++ A +++ EM E+    D  TYN +  GF R  +     +L E M  +G  
Sbjct: 502 HGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS 561

Query: 309 NVVSYNILIRGLLENGKVDEA 329
             VS   L+ G+L +  +D++
Sbjct: 562 CDVSTTTLLVGMLSDDGLDQS 582



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 77/175 (44%)

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A S    ML     P ++ ++ ++  + + K+    L L  +    G   +V   N+LI
Sbjct: 57  DALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLI 116

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +  C   +V  A  + + + K  C P+  ++ TL+ GL   G   +AL +++ ++ E  +
Sbjct: 117 NSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQ 176

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           PD++ Y   + GLC     S A   L         P  + +  L+ ++  +   T
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 235/429 (54%), Gaps = 24/429 (5%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           ++ L   G  P+V +Y  +I    ++  L  A+ + +EM ERG   N+V YN+L+D   K
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A+++ ++++ E    PNV+T+N +++G CK G  D+  ++   M       +  
Sbjct: 105 LSMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I GLCK+     A+ V  EM  SG+  DA TY+A+I G C+A KI+E  ++   M
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC  +VV Y+ +I    ++GK+ EA    + +R++  + D  T+  +I+GLCK G +
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283

Query: 362 NKAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNAYTCNS 403
            +A  IL++++E G+                    L +A  L++RM K GC  +  T  +
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G  +  +LE A +L + M R GC+P VV+Y TLI+GLCK  +  EA   ++EM   G
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF---TPDVTMYNILIHGLCSAGKVE 520
             P+++TY+ ++NGLC S +I  A +L  Q ++ G    +PD   Y  +++ L S+  V+
Sbjct: 404 CPPNLVTYNTMVNGLCVSGRIKEAQQL-VQRMKDGRAECSPDAATYRTIVNALMSSDLVQ 462

Query: 521 DALQLYSNM 529
           +A QL   M
Sbjct: 463 EAEQLLEQM 471



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 242/490 (49%), Gaps = 26/490 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C       A   L  +   G  PD +++  +I  +  +GDL GA+   D +   G + NV
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNV 57

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI  F +      A ++ E +  E    PN+VTYNV+++ LCK        ++  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M +     +  T+ S + G CK GNV+ A ++   MV  G+  + VTY+A+IDG C++ 
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  E  E+ E M   G   +  +Y+ LI GL +  K++EA  +   +    C  D   + 
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I+  CK+G L +A + L E                  M K     +  T N++++G  
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQE------------------MRKQRKSPDVVTYNTVIDGLC 278

Query: 410 QASKLENAIFLFKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           +  K+  A  +  +M   G   P VV+Y+T+INGLCK +   EA   +  M + G  PD+
Sbjct: 279 KLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDV 338

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I+GLC+  +++ A  L     + G  P+V  Y  LI GLC A KV++A ++   
Sbjct: 339 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR--PDIISYNITLKGLCSC 586
           M+   C PNLVTYNT+++GL  +G   +A ++   + + R    PD  +Y   +  L S 
Sbjct: 399 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458

Query: 587 SRMSDAFEFL 596
             + +A + L
Sbjct: 459 DLVQEAEQLL 468



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 218/426 (51%), Gaps = 33/426 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I A+ +    ++A+ + + M E  GC   +         LC+      A+  +  + E
Sbjct: 62  ALIAAFARAKKLEEAMKLLEEMRE-RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G  P+V ++ ++++G  K G++  A  +   M  +G+  NVV Y+ LIDG  K   ++ 
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           AKE+ E +   + V P+  TY+ +I+GLCK  + +E  +M  RM  +    D   Y S I
Sbjct: 181 AKEVLEEM-KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           H  CK+G +  A++  +EM +     D VTYN +IDG C+ GKI E   + + M   G +
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 309 --NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +VV+Y+ +I GL ++  + EA  + + + +  CN D  T+  +I+GLCK         
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC-------- 351

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GRL +A  L+  M + GC  N  T  +L++G  +A K++ A  + +EM  
Sbjct: 352 ----------GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK--PDMITYSLLINGLCQSKKI 484
            GC P +V+YNT++NGLC   R  EA   V+ M +   +  PD  TY  ++N L  S  +
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLV 461

Query: 485 DMALKL 490
             A +L
Sbjct: 462 QEAEQL 467



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 217/425 (51%), Gaps = 22/425 (5%)

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C  G     LE+ + MK      D+FT+   I  +  AG+++GA    R M   G   + 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTY A+I  F RA K++E  +L E M  +GC  N+V+YN+L+  L +   V  A  + + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           + E     +  T   L++G CK G ++ A ++L  +   G                   +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
             +A  ++  M   G   +A+T ++L++G  +A K+E A  + + M+  GC+P VV Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+  CK  +  EA   ++EM ++   PD++TY+ +I+GLC+  KI  A  +  Q  + G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 499 -FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              PDV  Y+ +I+GLC +  + +A +L   M K  C P++VTY T++DGL K G  ++A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             +   +      P++++Y   + GLC   ++ +A   + +    G  P  +T++ +V  
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 618 VMNNG 622
           +  +G
Sbjct: 418 LCVSG 422



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 146/265 (55%), Gaps = 3/265 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + E+A++ L  +   G  PDV  Y ++I+   KSG LL A     EM ++    +
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +IDG  K G    A+ I +++     V P+VVTY+ +INGLCK     E  ++ 
Sbjct: 267 VVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 326

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM K     D  TY + I GLCK G +E AE + + M  +G   + VTY  +I G C+A
Sbjct: 327 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 386

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE--KNCNADST 346
            K+ E   + E M   GC  N+V+YN ++ GL  +G++ EA  + + +++    C+ D+ 
Sbjct: 387 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAA 446

Query: 347 THGVLINGLCKNGYLNKAIQILNEV 371
           T+  ++N L  +  + +A Q+L ++
Sbjct: 447 TYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/514 (30%), Positives = 266/514 (51%), Gaps = 27/514 (5%)

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG-ALAVFDEMFER 164
           EAG+L       +A++F + L   G+     S    +  L    D+LG  L VF E  + 
Sbjct: 51  EAGLL------NEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQL 104

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           GV  N   YNIL++  F+ G    A  +  R+  +  + P+VV+Y  +I+G C  G   +
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI-PDVVSYTTIIDGYCHVGELQK 163

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            +++   M+    + + +TY S I  LCK+G V   E+V REM++ G+F D V Y  +ID
Sbjct: 164 VVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLID 223

Query: 285 GFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           GFC+ G  +  ++L+ E+  R+   + ++++ LI GL  +GKV EA  ++  + +K    
Sbjct: 224 GFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP 283

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  LI+G CK G + KA                    L N+M + G   N  T  +
Sbjct: 284 DEVTYTALIDGYCKLGEMKKAF------------------FLHNQMVQIGLTPNVVTYTA 325

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L +G  ++ +L+ A  L  EM RKG    + +YNT++NGLCK     +A   ++EM E G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD ITY+ L++   ++ ++  A +L  + L +G  P V  +N+L++GLC +GK+ED  
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M ++  +PN  TYN++M       +   + EI+  +  + + PD  +YNI +KG 
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGH 505

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           C    M +A+    + + +    T  +++ L++ 
Sbjct: 506 CKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 275/582 (47%), Gaps = 29/582 (4%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILE-LIEIQKCYCPEDVALSVIQAYGKNSMPDKA 92
           +   PH+F    + L++  L+    +  + L+            L +     K  M    
Sbjct: 35  WGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMV 94

Query: 93  LDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           L VF            E +      L R  +  +A   L  +  KG  PDV SY T+I+G
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
               G+L   + +  EM  +G++ N+  Y+ +I    K G  +  +++  R +M+  V+P
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL-REMMKRGVFP 213

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           + V Y  +I+G CK G      +++  M+  E   DS  + + I GL  +G V  A++++
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
            EM++ G   D VTY A+IDG+C+ G++K+ F L   M + G   NVV+Y  L  GL ++
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G++D A  +   +  K    + +T+  ++NGLCK G + +A++++ E++E G        
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG-------- 385

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                        +  T  +LM+ + +  ++  A  L +EM  +G  PTVV++N L+NGL
Sbjct: 386 ----------LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C   +  +    +K MLEKG  P+  TY+ ++   C    + ++ ++      +G  PD 
Sbjct: 436 CMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDS 495

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNILI G C A  +++A  L+  M ++       +YN L+ G FK     +A +++  
Sbjct: 496 NTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEE 555

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +  E L      YN+ +        M    E  ++A+ + +L
Sbjct: 556 MRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLL 597



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 23/404 (5%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA----GKIKEC 295
           D   +  F   L +AG +  A + + +++  G+ + A + N  +          G + + 
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           F  +  +G   C N  SYNIL+  L   GK+ EA  +   +  K C  D  ++  +I+G 
Sbjct: 98  FSEFPQLGV--CWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
           C  G L K +Q++ E++  G                  G++ +   ++  M K G   + 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
               +L++GF +    + A  LF EM  +   P  ++++ LI GL    +  EA     E
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M++KG++PD +TY+ LI+G C+  ++  A  L  Q +Q G TP+V  Y  L  GLC +G+
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ A +L   M ++    N+ TYNT+++GL K G+  +A+++   + E  L PD I+Y  
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +        M  A E L + L RG+ PT +T+++L+  +  +G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 269/546 (49%), Gaps = 34/546 (6%)

Query: 91  KALDVF-QRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE---KGLKPDVYS 137
           +A+D+  +RM E+ GC   ++         C +++ E+A   L+ + +   +   P+V S
Sbjct: 147 EAMDILIKRMPEL-GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVING    G +  A  +F EM +RG++ NVV Y  +IDG  K     RA+ ++++++
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V P+  TYN +I+G    G++ E + M + M  +  + D +TY S ++ LC  G  
Sbjct: 266 -DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A   +  M+  GI  +   Y  +I G+   G + E  +L  +M   G   +   +NI+
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
                +   +DEA+ I+  ++++  + D    G LI+ LCK                   
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK------------------L 426

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ DA    N+M   G   N +  NSL+ G     K E A   + EM  +G  P VV +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT++  LC   +  +A   +  M   G +PD+I+Y+ LI G C   +ID A K     L 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PD   YN L+HG C AG+++DA  ++  M +    P +VTY+T++ GLF T    +
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E++ +++    + +I  YNI L GL   + + +AF+       +       T++I++ 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 617 AVMNNG 622
           A+  +G
Sbjct: 667 ALFKSG 672



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 248/512 (48%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PD+ +Y  +I    + G L    A F  + + G   N +  N L+ G         A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK---DSFTYCSF 247
           +I  + + E    P+VV+YN ++ G C   R +E LE+   M  ++      +  +Y + 
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G    G V+ A  ++ EM++ GI  + VTY  +IDG C+A  +     +++ M  KG 
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +  +YN LI G L  GK  E + + E +       D  T+G L+N LC NG   +A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             + +   G                 +G L++   L+N M ++G   + +  N +   + 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           + + ++ A+ +F +M ++G SP VV++  LI+ LCK+ R  +A     +M+ +G  P++ 
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            ++ L+ GLC   K + A +   + L +G  PDV  +N ++  LC+ G+V  A +L   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           ++    P++++Y TL+ G    G  D+A +  + +L   L+PD  +YN  L G C   R+
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA+    + L  GI P  +T+  ++  +   
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 265/529 (50%), Gaps = 28/529 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +VI    K  + D+A  VFQ+M        N+ + C         ++++  R L  +   
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GLKPD Y+YG+++N L  +G    A   FD M  +G++ NV  Y ILI G+  KG     
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++   L++E  + P+   +N++     K    DE + ++++MK+     D   + + I 
Sbjct: 363 HDLLN-LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALID 421

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LCK G V+ A   + +M+  G+  +   +N+++ G C   K ++  E +  M  +G   
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV +N ++  L   G+V +A  + +L+       D  ++  LI G C            
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCL----------- 530

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +AA  ++ M   G K + +T N+L++G+ +A ++++A  +F+EM R G
Sbjct: 531 -------VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +P VV+Y+T+++GL    RF EA      M+  G + ++  Y++++NGL ++  +D A 
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           KL      K F  ++T +NI+I  L  +G+ EDA+ L++ +     VP++ TY  + + L
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL 703

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            + G  ++  ++++ + +    P+    N  ++ L     ++ A  +L+
Sbjct: 704 IEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLS 752



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 236/508 (46%), Gaps = 33/508 (6%)

Query: 141 VINGLVKSGDL--LGALAVFDEMFERGVETNVVCYNILIDGFFK-KGDYMRAKE------ 191
           VI    +SG L    AL +FD +       +++ +N L+    +  G      E      
Sbjct: 18  VIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVS 77

Query: 192 IWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++ R++ E +  V P++ TY+++I   C+ GR +     +  + K+    ++      + 
Sbjct: 78  LFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 250 GLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GR 304
           GLC A  + E  + + + M E G   D V+YN ++ GFC   + +E  EL  +M    GR
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               NVVSY  +I G    G+VD+A +++  + ++    +  T+  +I+GLCK   +++A
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 365 IQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +  ++ + G                  G+  +   ++  M  HG K + YT  SL+N 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                +   A F F  M RKG  P V  Y  LI+G        E +  +  M+E G  PD
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              ++++     +   ID A+ +  +  Q+G +PDV  +  LI  LC  G+V+DA+  ++
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFN 437

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      PN+  +N+L+ GL      +KA E +  +L + +RPD++ +N  L  LC+  
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           ++  A   ++     G  P  I++  L+
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLI 525



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 208/457 (45%), Gaps = 42/457 (9%)

Query: 40  LFHHILRRLIDPKLVVH------------VSRILELIE--IQKCYCPEDVALSVI-QAYG 84
            F  ++R+ I P + ++            +S + +L+   ++    P+    ++I  AY 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 85  KNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K +M D+A+ +F +M +         FG     LC+  + + A    N +  +G+ P+++
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            + +++ GL        A   + EM  +G+  +VV +N ++     KG  M+A+ + + L
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID-L 508

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      P+V++Y  +I G C  GR DE  +  D M     + D +TY + +HG C+AG 
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           ++ A  V+REM+ +GI    VTY+ ++ G     +  E  EL+  M   G   N+  YNI
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           ++ GL +N  VDEA  +++ L  K+   + TT  ++I  L K+G    A+ +   +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EG L +   L + M+K G   N+   N+L+   +    +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
               ++  K  S    +   LI+ L + E    A S 
Sbjct: 749 AYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 135/271 (49%), Gaps = 14/271 (5%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS-------KLENAI 418
           +++      G   L DA  L + +  H    +    N L+    + S       + E  +
Sbjct: 17  RVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVV 76

Query: 419 FLFKEMSRK---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            LF  M R+     +P + +Y+ LI   C++ R    ++    +L+ GW+ + I  + L+
Sbjct: 77  SLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 476 NGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KK 531
            GLC +K++  A+ +  + + + G TPDV  YN L+ G C+  + E+AL+L   M   + 
Sbjct: 137 KGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R+C PN+V+Y T+++G F  G  DKA  ++  +++  ++P++++Y   + GLC    +  
Sbjct: 197 RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A       + +G+ P   T++ L+   ++ G
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKPD ++Y T+++G  ++G +  A  VF EM   G+   V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y+ ++ G F    +  AKE++  ++     + N+  YN+++NGL K    DE  +++ 
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQW-NIWIYNIILNGLSKNNCVDEAFKLFQ 647

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +   + + +  T+   I  L K+G  E A  ++  +   G+  D  TY  + +     G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E  +L+  M + G   N    N L+R LL  G +  A +    L EKN + +++T  
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTA 767

Query: 350 VLINGLCKNGYLNKAI------QILNEVEE 373
           +LI+ L ++ Y + A       ++LNE ++
Sbjct: 768 MLISLLSRDEYHHHATSLPEKYRVLNEAKK 797


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 264/540 (48%), Gaps = 54/540 (10%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK F   + + G+ PD YSY  +I+GL+ +G +  AL + ++M ++G++ ++V Y I+  
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING----------------------- 215
           GF   G    A+EI ++++ +  + P++VTY V+I G                       
Sbjct: 264 GFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ 323

Query: 216 ------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
                       LCK G+ DE L++   M+ N  + D  TY   IHGLCK G V+ A ++
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y+EM  + IF ++  ++ ++ G C  G + +    ++ +       +V  YNI+I G ++
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G V+EA+ +++ LR+K       T   LI G CKN                   ++ +A
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKN------------------RKVVEA 485

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+  +  HG + +A T  +LMN + +   +     L  EM+ K   PTVV+Y  +I G
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK  +  E+   +++M  KG  PD ITY+ +I   C++K +  A +L    L     P 
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN+LI GLC  G VEDA ++  +++ RN     V Y T++      GD  +A+++++
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFH 665

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++E+     I  Y+  +  LC    +++A  +    L  G+ P    + +++ A    G
Sbjct: 666 QMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAG 725



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 255/513 (49%), Gaps = 20/513 (3%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           N + + G      +   +++GL        A+    +   +    +VV +N ++  + K 
Sbjct: 139 NDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKL 198

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G    AK  +  ++++  + P+  +YN++I+GL   G  +E LE+ + M+K   + D  T
Sbjct: 199 GLADVAKSFF-CMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVT 257

Query: 244 YCSFIHGLCKAGNVEGAERVYREMV-ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           Y     G    G + GA  + ++M+ + G+  D VTY  +I G C+ G I+E   L   +
Sbjct: 258 YKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDL 317

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G  LNV+ Y++L+  L + G+VDEA+ +   +   N   D  T+ +LI+GLCK G +
Sbjct: 318 LSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKV 377

Query: 362 NKAIQILNEV----------EEGG-------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            +AIQ+  E+             G       +G L+DA    + +     + +    N +
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIM 437

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G+++   +E A+ L+K +  K  +P++V++N+LI G CK  +  EA   ++ +   G 
Sbjct: 438 IDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGL 497

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +P  +TY+ L+N  C+   I+   +L  +   K   P V  Y ++I GLC   K+E+++Q
Sbjct: 498 EPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ 557

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L  +M+ +   P+ +TYNT++    K  D  KA E+ + +L   L P   +YN+ + GLC
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
               + DA   L     R I  T + +  +++A
Sbjct: 618 RYGDVEDADRVLVSLQDRNINLTKVAYTTMIKA 650



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 207/423 (48%), Gaps = 20/423 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ Q ++A + L  +    L+PD+ +Y  +I+GL K G +  A+ ++ EM    +  N
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              ++ ++ G  +KG    A+  ++ L+M +++ P+V  YN+MI+G  K G  +E + ++
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIM-SNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            R++         T+ S I+G CK   V  A R+   +   G+   AVTY  +++ +C  
Sbjct: 455 KRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEE 514

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I +  EL   M  K     VV+Y ++I+GL +  K++E++ + E +R K    D  T+
Sbjct: 515 GNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITY 574

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I   CK   + KA ++L++                  M  H  +    T N L++G 
Sbjct: 575 NTIIQCFCKAKDMRKAFELLDD------------------MLIHNLEPTPATYNVLIDGL 616

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +E+A  +   +  +  + T V+Y T+I   C       A     +M+EKG++  +
Sbjct: 617 CRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSI 676

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             YS +IN LC+   I+ A    C  L  G +PD  ++ ++++    AG V    +L + 
Sbjct: 677 KDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAV 736

Query: 529 MKK 531
           M K
Sbjct: 737 MIK 739



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 210/449 (46%), Gaps = 31/449 (6%)

Query: 185 DYMRAKEIWERLVM----------ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           D M  +E+  R+V           E ++ P++ TYN ++  L      D   ++++ +K 
Sbjct: 87  DQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKD 143

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           +   + + T    + GLC       A    R+          V++N ++  +C+ G    
Sbjct: 144 SGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADV 203

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
               + +M + G L +  SYNILI GL+  G ++EA+ +   + ++    D  T+ ++  
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G    G ++ A +I+ ++                 +   G K +  T   L+ G  Q   
Sbjct: 264 GFHLLGLMSGAREIIQKM-----------------LTDEGLKPDLVTYTVLICGHCQMGN 306

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E A+ L +++   G    V+ Y+ L++ LCK  +  EA   + EM     +PD++TYS+
Sbjct: 307 IEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSI 366

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+GLC+  K+  A++L  +       P+   ++ ++ GLC  G + DA   + ++   N
Sbjct: 367 LIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSN 426

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P++  YN ++DG  K GD ++A+ ++  + ++ + P I+++N  + G C   ++ +A 
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
             L      G+ P+ +T+  L+ A    G
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEG 515



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 192/407 (47%), Gaps = 31/407 (7%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRM--NEIFG---CEAGIL---CRKRQFEKAKRF 122
           P+ V  S+ I    K     +A+ +++ M  N IF      +GIL   C K     A+ +
Sbjct: 359 PDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMY 418

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            +SL    L+PDV  Y  +I+G VK GD+  A+ ++  + ++ +  ++V +N LI GF K
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
               + A+ + E + +   + P+ VTY  ++N  C+ G  ++  E+   M   + E    
Sbjct: 479 NRKVVEARRLLESIKLH-GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I GLCK   +E + ++  +M   G+  D +TYN +I  FC+A  +++ FEL + M
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
                     +YN+LI GL   G V++A  +   L+++N N     +  +I   C  G  
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657

Query: 362 NKAIQILNE-VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
            +A+++ ++ VE+G E  + D ++++NR+ K  C +N                   A + 
Sbjct: 658 QRAVKVFHQMVEKGFEVSIKDYSAVINRLCKR-CLIN------------------EAKYY 698

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F  M   G SP    +  ++N   +       +  +  M++ G   D
Sbjct: 699 FCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 11/265 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---- 109
           VV   R+LE I++           +++ AY +    +K  ++   MN +   E  +    
Sbjct: 482 VVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN-LKDIEPTVVTYT 540

Query: 110 -----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC++R+ E++ + L  +  KGL PD  +Y T+I    K+ D+  A  + D+M   
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            +E     YN+LIDG  + GD   A  +   L  + ++    V Y  MI   C  G    
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSL-QDRNINLTKVAYTTMIKAHCVKGDAQR 659

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            ++++ +M +   E     Y + I+ LCK   +  A+  +  M+  G+  D   +  M++
Sbjct: 660 AVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLN 719

Query: 285 GFCRAGKIKECFELWEVMGRKGCLN 309
            F RAG +   FEL  VM + G L+
Sbjct: 720 AFHRAGHVHSVFELLAVMIKFGLLH 744



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 22/223 (9%)

Query: 405 MNGFIQASKLENAIFL--FKEMSRK--GCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           M+  I+   ++NA F+  F  +SR   G   + VS   + + L +  RF +    + +ML
Sbjct: 31  MDDVIENLSVQNADFVADFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQML 90

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++                  S+ +  AL +  +  ++   P +  YN L++ L     + 
Sbjct: 91  QEE---------------VASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMW 135

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           D   +Y+++K      +  T + ++DGL        A+        +   P ++S+N  +
Sbjct: 136 D---VYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIM 192

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
              C       A  F    L  GILP T +++IL+  ++  G+
Sbjct: 193 SRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGS 235


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 175/622 (28%), Positives = 282/622 (45%), Gaps = 79/622 (12%)

Query: 21  ALALFDSATREP------GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           AL  FD A+  P      G AHS      +L+ L   ++   +  +LE ++ Q      +
Sbjct: 73  ALKFFDWASTRPFSCSLDGVAHSS-----LLKLLASFRVFPEIELVLENMKAQHLKPTRE 127

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
              ++I AYG++   D+AL +F  + E+  C   +         L +  + + A +  + 
Sbjct: 128 AFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDK 187

Query: 126 LWEK----GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           + +     G   D Y+   V+ GL   G +     +  + + +G   +VV YN++IDG+ 
Sbjct: 188 MLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYC 247

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           KKGD   A    + L M+  V P V TY  +ING CK G F+   ++   M       + 
Sbjct: 248 KKGDLQCATRTLKELKMK-GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 306

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             + + I    K G V  A    R M E G   D  TYN MI+  C+ G+IKE  E  E 
Sbjct: 307 KVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEK 366

Query: 302 MGRKGCL------------------------------------NVVSYNILIRGLLENGK 325
              +G L                                    ++VSY   I G++ +G+
Sbjct: 367 AKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGE 426

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           +D A+ + E + EK    D+  + VL++GLCKNG                  R      L
Sbjct: 427 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNG------------------RFPAMKLL 468

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           ++ M     + + Y   +LM+GFI+  +L+ AI +FK + RKG  P +V YN +I G CK
Sbjct: 469 LSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 528

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  +A S + +M      PD  TYS +I+G  +   +  ALK+  Q ++  F P+V  
Sbjct: 529 FGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 588

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  LI+G C    +  A +++  MK  + VPN+VTY TL+ G FK G  +KA  I+  +L
Sbjct: 589 YTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELML 648

Query: 566 EERLRPDIISYNITLKGLCSCS 587
                P+  +++  + GL + +
Sbjct: 649 MNGCPPNDATFHYLINGLTNTA 670



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 209/417 (50%), Gaps = 23/417 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAER 262
           P    ++ +I    + G  D  L+++  +++      +     S ++GL K+G V+ A +
Sbjct: 124 PTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQ 183

Query: 263 VYREMVES----GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
           +Y +M+++    G  VD  T + ++ G C  GKI+E   L +    KGC+ +VV YN++I
Sbjct: 184 LYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMII 243

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            G  + G +  A    + L+ K       T+G LING CK G      Q+L E+   G  
Sbjct: 244 DGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 303

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G +  AA  + RM + GC  +  T N+++N   +  +++ A   
Sbjct: 304 MNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEF 363

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            ++   +G  P   SY  L++  CK   + +A   +  + E G KPD+++Y   I+G+  
Sbjct: 364 LEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVV 423

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             +ID+AL +  + ++KG  PD  +YN+L+ GLC  G+      L S M  RN  P++  
Sbjct: 424 HGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYV 483

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + TLMDG  + G+ D+A++I+  I+ + + P I+ YN  +KG C   +M+DA   LN
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 239/563 (42%), Gaps = 104/563 (18%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K   + A R L  L  KG+ P V +YG +ING  K+G+      +  EM  RG+  NV
Sbjct: 247 CKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 306

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N +ID  FK G   +A E   R+  E    P++ TYN MIN  CK GR  E  E  +
Sbjct: 307 KVFNNVIDAEFKYGLVTKAAETMRRMA-EMGCGPDITTYNTMINFSCKGGRIKEADEFLE 365

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGN-VEGAERVYR------------------------ 265
           + K+     + F+Y   +H  CK G+ V+ A  ++R                        
Sbjct: 366 KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG 425

Query: 266 ----------EMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYN 314
                     +M+E G+F DA  YN ++ G C+ G+       L E++ R    +V  + 
Sbjct: 426 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFA 485

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE-- 372
            L+ G + NG++DEAI I++++  K  +     +  +I G CK G +  A+  LN+++  
Sbjct: 486 TLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNV 545

Query: 373 -------------EG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                        +G   +  ++ A  +  +M KH  K N  T  SL+NGF + + +  A
Sbjct: 546 HHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRA 605

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +F+ M      P VV+Y TL+ G  K  +  +A S  + ML  G  P+  T+  LING
Sbjct: 606 EKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLING 665

Query: 478 L-------------------------------------------------CQSKKIDMAL 488
           L                                                 C+   +D A 
Sbjct: 666 LTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQ 725

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + L KGF  D   +  ++HGLC  GK ++   + S    +  +   V Y+  +D  
Sbjct: 726 LLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKY 785

Query: 549 FKTGDCDKALEIWNHILEE-RLR 570
              G   +A  I   ++EE R+R
Sbjct: 786 LYQGRLSEASVILQTLIEEDRVR 808


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 270/548 (49%), Gaps = 52/548 (9%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D+ALS   AY     P  AL +FQ+M  +                            LKP
Sbjct: 135 DIALS---AYLHEGKPHVALQIFQKMIRL---------------------------KLKP 164

Query: 134 DVYSYGTVINGLVK---SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           ++ +  T++ GLV+   S  +  A  VFD+M + GV  NV  +N+L++G+  +G    A 
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + ER+V E  V P+ VTYN ++  + K GR  +  E+   MKKN    +  TY + ++G
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLN 309
            CK G+++ A ++   M ++ +  D  TYN +I+G C AG ++E  EL + M   K   +
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+YN LI G  E G   EA  + E +      A+  TH + +  LCK            
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK------------ 392

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
             EE  E        LV   D HG   +  T ++L+  +++   L  A+ + +EM +KG 
Sbjct: 393 --EEKREAVTRKVKELV---DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
               ++ NT+++ LCK  +  EA++ +    ++G+  D +TY  LI G  + +K++ AL+
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +  +   TP V+ +N LI GLC  GK E A++ +  + +   +P+  T+N+++ G  
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  +KA E +N  ++   +PD  + NI L GLC       A  F N  L       T+
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN-TLIEEREVDTV 626

Query: 610 TWHILVRA 617
           T++ ++ A
Sbjct: 627 TYNTMISA 634



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 249/511 (48%), Gaps = 29/511 (5%)

Query: 124 NSLWEKGL----KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           NSL    L     P    +   ++  +  G    AL +F +M    ++ N++  N L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175

Query: 180 FFKKGDYMR---AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
             +         A+E+++ +V +  V  NV T+NV++NG C  G+ ++ L M +RM    
Sbjct: 176 LVRYPSSFSISSAREVFDDMV-KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234

Query: 237 R-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           +   D+ TY + +  + K G +   + +  +M ++G+  + VTYN ++ G+C+ G +KE 
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F++ E+M +   L ++ +YNILI GL   G + E + + + ++      D  T+  LI+G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
             + G                     +A  L+ +M+  G K N  T N  +    +  K 
Sbjct: 355 CFELGLS------------------LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396

Query: 415 ENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           E      KE+    G SP +V+Y+TLI    KV     A   ++EM +KG K + IT + 
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +++ LC+ +K+D A  L     ++GF  D   Y  LI G     KVE AL+++  MKK  
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P + T+N+L+ GL   G  + A+E ++ + E  L PD  ++N  + G C   R+  AF
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           EF N+++     P   T +IL+  +   G +
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 202/407 (49%), Gaps = 29/407 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    ++A + +  + +  + PD+ +Y  +INGL  +G +   L + D M    ++ +V
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LIDG F+ G  + A+++ E++  +  V  N VT+N+ +  LCK    +E  E   
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMEND-GVKANQVTHNISLKWLCK----EEKREAVT 400

Query: 231 RMKKNEREKDSF-----TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           R  K   +   F     TY + I    K G++ GA  + REM + GI ++ +T N ++D 
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 286 FCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+  K+ E   L     ++G  ++ V+Y  LI G     KV++A+ +W+ +++      
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVN 387
            +T   LI GLC +G    A++  +E+ E G                 EGR+  A    N
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
              KH  K + YTCN L+NG  +    E A+  F  +  +    T V+YNT+I+  CK +
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDK 639

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +  EAY  + EM EKG +PD  TY+  I+ L +  K+    +L  +F
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 145/281 (51%), Gaps = 13/281 (4%)

Query: 59  RILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGI 109
           ++ EL+++   + P+ V   ++I+AY K      AL++ + M +                
Sbjct: 402 KVKELVDMH-GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++R+ ++A   LNS  ++G   D  +YGT+I G  +   +  AL ++DEM +  +   
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +N LI G    G    A E ++ L  E+ + P+  T+N +I G CK GR ++  E +
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +   K+  + D++T    ++GLCK G  E A   +  ++E    VD VTYN MI  FC+ 
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKD 638

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
            K+KE ++L   M  KG   +  +YN  I  L+E+GK+ E 
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 274/553 (49%), Gaps = 58/553 (10%)

Query: 101 EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           ++  C   I  L +  Q ++A+    +L++  L P+  +Y  +I+G  K GD+ GA +  
Sbjct: 93  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESAL 152

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
            EM E+    NV+ Y+ LI+G+ K+G    A ++  ++V + ++ PN+ TY ++++G  K
Sbjct: 153 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM-PNICTYAILLDGSFK 211

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  D  L+++ +MK+   + + F   +F++ + ++G +E AE +  +M   G+  D V 
Sbjct: 212 AGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVN 271

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y  ++DGF ++GK+     L + M  K  + ++V++N+LI  L + GK D   SI+  +R
Sbjct: 272 YTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMR 330

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           E   + D  T+  ++NG  K G    A+++ NE                  M       N
Sbjct: 331 EMGLSPDLATYNTMLNGNFKKGNWTSALELWNE------------------MKSRKLIPN 372

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY--------------------- 436
           A TCN ++NG  +A ++ENAI + KEM   G  PT  +Y                     
Sbjct: 373 AITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHE 432

Query: 437 --------------NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                         N LI+ LCK+    +A + +K+M E+G   D  TY+ LI+G C S 
Sbjct: 433 LLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISS 492

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +  A       L +  +PD+  YN+L+ GL  AG + +A  L S +KKR  VPN  TY 
Sbjct: 493 HLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYE 552

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TLM G  K  +  + L I+  ++ +   P   +YN+ +       +M  A E +N+   +
Sbjct: 553 TLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 612

Query: 603 GILPTTITWHILV 615
           G+ PT  T+ IL+
Sbjct: 613 GVSPTCTTYDILI 625



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 255/553 (46%), Gaps = 55/553 (9%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            E+A      +   G+ PDV ++G+++ GL K G L     +  EM + G+  N V Y I
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+D  FK G    A      +++  + + +V+   V+I+GL K G+  E   ++  + + 
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNF-DVIACTVLIDGLFKSGQIKEAEYLFCNLYQL 123

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               +  TY + I G CK G++ GAE    EM E     + +TY+++I+G+ + G + + 
Sbjct: 124 NLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDA 183

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F++   M  K  + N+ +Y IL+ G  + G  D A+ ++  +++     +       +N 
Sbjct: 184 FKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 243

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           + ++G + +A +++ ++  GG                  G+++ A +L   M       +
Sbjct: 244 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD 303

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T N L+N   +  K +    ++  M   G SP + +YNT++NG  K   +  A     
Sbjct: 304 IVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWN 362

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP---------------- 501
           EM  +   P+ IT +++INGLC++ +++ A+ +  + +  G  P                
Sbjct: 363 EMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSR 422

Query: 502 -------------------DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
                              D  +YNILI  LC  G    A  +  +M++R  + +  TYN
Sbjct: 423 RADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYN 482

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+ G   +    +A   ++ +L ER+ PDI +YN+ L GL     + +A + L++   R
Sbjct: 483 ALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKR 542

Query: 603 GILPTTITWHILV 615
           G++P   T+  L+
Sbjct: 543 GLVPNACTYETLM 555



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 159/320 (49%), Gaps = 18/320 (5%)

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------ 375
           +NG ++EA++++E +       D  T G ++ GLCK+G L++   +L E+ + G      
Sbjct: 2   QNG-LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNV 60

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                       G++A+A   +  M   G   +   C  L++G  ++ +++ A +LF  +
Sbjct: 61  SYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNL 120

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            +    P  ++Y+ LI+G CK+     A S + EM EK   P++ITYS LING  +   +
Sbjct: 121 YQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLL 180

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             A K+  + + K   P++  Y IL+ G   AG  + AL LYS MK+     N+   +  
Sbjct: 181 HDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAF 240

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++ + ++G  ++A E+   +    L+PD+++Y   + G     ++S A     +   + +
Sbjct: 241 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV 300

Query: 605 LPTTITWHILVRAVMNNGAS 624
           +   +T+++L+  +   G S
Sbjct: 301 VFDIVTFNVLINCLFKLGKS 320



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           E +    G L +     +A   L+ + ++GL P+  +Y T++ G  K  +    L ++ E
Sbjct: 514 ETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCE 573

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           M  +G       YN+LI  F K G   +AKE+   +  +  V P   TY+++I G C
Sbjct: 574 MVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK-GVSPTCTTYDILICGWC 629


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 169/645 (26%), Positives = 301/645 (46%), Gaps = 55/645 (8%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPH----LFHHILRRLI------DPKLVVHVSR- 59
           LL   ++P  AL  F  A  + G+ H+      + H + R  +        K V+  SR 
Sbjct: 136 LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 195

Query: 60  --------ILELIEIQKCYCPE-----DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE 106
                   I +++   +  C       DV  SV    G   + ++A + F RM       
Sbjct: 196 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELG---LLEEANECFSRMRNFRTLP 252

Query: 107 AGILC--------RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
               C        +    +  ++F N +   G+ P V++Y  +I+ L K GDL  +  +F
Sbjct: 253 KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF 312

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
            +M E G+  +VV YN LIDG+ K G       ++  +  +    P+++TYN +IN  CK
Sbjct: 313 VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNGLINCYCK 371

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             +     E +  MK N  + +  TY + I   CK G ++GA +++ +M  +G+  +  T
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y ++ID  C+AG + E ++L   M + G  LN+V+Y  L+ GL + G++ EA  ++  + 
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +   + +   +  L++G  K                    R+ DA  ++ +M +   K +
Sbjct: 492 KDGISPNQQVYTALVHGYIK------------------AERMEDAMKILKQMTECNIKPD 533

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
                S++ G     KLE    + +EM  +G S   V   T+I+   K  +  +A +F +
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 593

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM + G +  ++TY +LI+GLC++  +++A+   C+ L  G  P+V +Y  LI GLC   
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNN 653

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            +E A +L+  M+ R   P++  +  L+DG  K G+  +AL + + + E  +  D+  Y 
Sbjct: 654 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYT 713

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + G   C  +  A +F N+ + +GILP  +    L+R     G
Sbjct: 714 SLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 758



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 54/419 (12%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI-HGLCKAGNVEGAERVYRE 266
            ++V+ +   + G  +E  E + RM+ N R       C+F+ H L K+GN +   + + +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMR-NFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 279

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M+ +GI                                    +V +YN++I  L + G +
Sbjct: 280 MIGAGI----------------------------------APSVFTYNVMIDYLCKEGDL 305

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           + +  ++  +RE   + D  T+  LI+G                   G  G L + ASL 
Sbjct: 306 ENSRRLFVQMREMGLSPDVVTYNSLIDGY------------------GKVGSLEEVASLF 347

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           N M   GC  +  T N L+N + +  K+  A   F EM   G  P VV+Y+TLI+  CK 
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
                A     +M   G  P+  TY+ LI+  C++  +  A KL    LQ G   ++  Y
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L+ GLC AG++ +A +++ +M K    PN   Y  L+ G  K    + A++I   + E
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             ++PD+I Y   + G CS  ++ +    L +   RGI    +    ++ A    G S+
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 260/473 (54%), Gaps = 20/473 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR R+   A   +  + + G +PD  ++ T+INGL   G +  AL + D M E G +  +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  N L++G    G    A  + +R+V ET   PN VTY  ++  +CK G+    +E+  
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M++ + + D+  Y   I GLCK G+++ A  ++ EM   G   D + Y  +I GFC AG
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 291 KIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  +  +L  +++ RK   +VV+++ LI   ++ GK+ EA  + + + ++  + D+ T+ 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK   L+KA  +L+                   M   GC  N  T N L+NG+ 
Sbjct: 357 SLIDGFCKENQLDKANHMLD------------------LMVSKGCGPNIRTFNILINGYC 398

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A+ +++ + LF++MS +G     V+YNTLI G C++ +   A    +EM+ +  +PD++
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y +L++GLC + + + AL++  +  +     D+ +YNI+IHG+C+A KV+DA  L+ ++
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             +   P++ TYN ++ GL K G   +A  ++  + E+   P+  +YNI ++ 
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 259/543 (47%), Gaps = 63/543 (11%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+D+FQ M           F     ++ R +Q++        +  KG+  ++Y+   +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   L  A +   ++ + G E                                  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYE---------------------------------- 139

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+ VT++ +INGLC  GR  E LE+ DRM +   +    T  + ++GLC  G V  A 
Sbjct: 140 --PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGL 320
            +   MVE+G   + VTY  ++   C++G+     EL   M  RK  L+ V Y+I+I GL
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++G +D A +++  +  K   AD   +  LI G C                    GR  
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY------------------AGRWD 299

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           D A L+  M K     +    ++L++ F++  KL  A  L KEM ++G SP  V+Y +LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  +A   +  M+ KG  P++ T+++LING C++  ID  L+L  +   +G  
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D   YN LI G C  GK+E A +L+  M  R   P++V+Y  L+DGL   G+ +KALEI
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  I + ++  DI  YNI + G+C+ S++ DA++       +G+ P   T++I++  +  
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539

Query: 621 NGA 623
            G+
Sbjct: 540 KGS 542



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 256/536 (47%), Gaps = 44/536 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A   ++ + E G KP + +   ++NGL  +G +  A+ + D M E G + N
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  ++    K G    A E+  ++  E  +  + V Y+++I+GLCK G  D    ++
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+    + D   Y + I G C AG  +   ++ R+M++  I  D V ++A+ID F + 
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK++E  EL + M ++G   + V+Y  LI G  +  ++D+A  + +L+  K C  +  T 
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LING CK   ++                  D   L  +M   G   +  T N+L+ GF
Sbjct: 391 NILINGYCKANLID------------------DGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  KLE A  LF+EM  +   P +VSY  L++GLC      +A    +++ +   + D+
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+++I+G+C + K+D A  L C    KG  PDV  YNI+I GLC  G + +A  L+  
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDK----------------------ALEIWNHILE 566
           M++    PN  TYN L+      GD  K                      AL     +L+
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612

Query: 567 ERLRPDIISYNITLKGLC--SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
               PD+ ++   L+  C    + + DA     +    G  P  +T++ +++ ++N
Sbjct: 613 AGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 269/565 (47%), Gaps = 55/565 (9%)

Query: 56  HVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM-------NEI-FG 104
            VS  LEL++  ++  + P  + L +++     N     A+ +  RM       NE+ +G
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
               ++C+  Q   A   L  + E+ +K D   Y  +I+GL K G L  A  +F+EM  +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + +++ Y  LI GF   G +    ++  R +++  + P+VV ++ +I+   K G+  E
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLL-RDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             E+   M +     D+ TY S I G CK   ++ A  +   MV  G   +  T+N +I+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+C+A  I +  EL+  M  +G + + V+YN LI+G  E GK++ A  +++ +  +    
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  ++ +L++GLC NG   KA++I  ++E                  K   +L+    N 
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIE------------------KSKMELDIGIYNI 497

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G   ASK+++A  LF  +  KG  P V +YN +I GLCK     EA    ++M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 464 WKPDMITYSLLING------LCQSKKIDMALKLC----------------CQFLQKGFTP 501
             P+  TY++LI          +S K+   +K C                 + L+ G  P
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617

Query: 502 DVTMYNILIHGLC--SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           DV  +  L+   C      V DA  L+ NMK     PN+VTYNT++ GL       +   
Sbjct: 618 DVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPG 677

Query: 560 IWNHILEERLRPDIISYNITLKGLC 584
           + + + E   +P+ ++ +  + GLC
Sbjct: 678 VLDQMFERGCQPNAVTKSTFISGLC 702



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 234/473 (49%), Gaps = 22/473 (4%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEK 129
           +I    K+   D A ++F  M EI G +A I+         C   +++   + L  + ++
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + PDV ++  +I+  VK G L  A  +  EM +RG+  + V Y  LIDGF K+    +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + + L++     PN+ T+N++ING CK    D+ LE++ +M       D+ TY + I 
Sbjct: 372 NHMLD-LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCL 308
           G C+ G +E A+ +++EMV   +  D V+Y  ++DG C  G+ ++  E++E + + K  L
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++  YNI+I G+    KVD+A  ++  L  K    D  T+ ++I GLCK G L++A  + 
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN-----GF-IQASKLENAIFLFK 422
            ++EE G        +++ R   H  + +A     L+      GF + AS L  A+    
Sbjct: 551 RKMEEDGHSPNGCTYNILIR--AHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFG--EAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            M + G  P V ++ TL+   C  E     +A +  K M   G+KP+++TY+ +I GL  
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
              I     +  Q  ++G  P+    +  I GLC       A+ L   M+  N
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 113/211 (53%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K ++A+ LF+EM+R    P ++ ++ L + + + +++       K+M  KG   ++ T S
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C+ +K+ +A     + ++ G+ PD   ++ LI+GLC  G+V +AL+L   M + 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P L+T N L++GL   G    A+ + + ++E   +P+ ++Y   LK +C   + + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E L     R I    + + I++  +  +G+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 249/473 (52%), Gaps = 30/473 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC   + ++A    +SL   G  L  D+     ++  L K+G     L V   M +R   
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCGLPADL-----LVRELSKAGRAEECLKVVKLMLDRQQL 63

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
                 NI ID   K  D +   E W + + +     N V+YN++IN  CK  R DE ++
Sbjct: 64  RERHLVNITIDSLCKS-DMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQ 122

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++  MK       + TY + I GLC+   +  A++ Y  ++ SG     +TYN ++DGFC
Sbjct: 123 LFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFC 182

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +A ++ E  EL  E++ R G +    YN +I  L + GK+ EA   +  + +        
Sbjct: 183 KADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEV 242

Query: 347 THGVLINGLCKNGYLNKAIQIL-NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           T  VLI+GLCK   + +A +I  + +E GG      + S+V              C+ LM
Sbjct: 243 TFTVLIDGLCKANRVARAKEIFFSYLESGG------SPSVV-------------ICSCLM 283

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +GF +   ++ A  +F+ M+ +GC+P  VS N LINGLCK +R  +A    +E++++  K
Sbjct: 284 DGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAK 343

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD++TYS  ++GLC++ ++D A ++ C  + KG TPDV MY  LI GLCS G++++A ++
Sbjct: 344 PDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKV 403

Query: 526 YS-NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +  +M+   C PN  T N L++G    G  D+A E++   +E  ++PD  +++
Sbjct: 404 FEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 216/438 (49%), Gaps = 32/438 (7%)

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE----MWDRMKKNEREK 239
           G    A E++  LV +    P     ++++  L K GR +ECL+    M DR +  ER  
Sbjct: 13  GKLDEALELFHSLVSDGCGLP----ADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHL 68

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
            + T    I  LCK+  ++ AE  ++E+ +    V+ V+YN +I+ FC+  +I E  +L+
Sbjct: 69  VNIT----IDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLF 124

Query: 300 EVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M   GC    S YN LI GL    ++ EA   +E L      A   T+ +L++G CK 
Sbjct: 125 GEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
             + +A+++LNE              LV R    G  + +   N +++   +  K+  A 
Sbjct: 185 DRVPEAVELLNE--------------LVAR----GGVVTSAPYNCIIDTLFKKGKIHEAE 226

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             F  M + G  P  V++  LI+GLCK  R   A       LE G  P ++  S L++G 
Sbjct: 227 LFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGF 286

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+   +D A ++      +G TP+    NILI+GLC A ++  A +++  + KR   P++
Sbjct: 287 CKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDV 346

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE-FLN 597
           VTY+T MDGL +    D+A ++   ++++   PD++ Y   + GLCS  R+ +A + F  
Sbjct: 347 VTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEV 406

Query: 598 DALCRGILPTTITWHILV 615
           D    G  P   T ++LV
Sbjct: 407 DMRAAGCAPNNFTCNVLV 424



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 166/333 (49%), Gaps = 20/333 (6%)

Query: 286 FCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            C  GK+ E  EL+  +   GC   +  ++L+R L + G+ +E + + +L+ ++    + 
Sbjct: 9   LCHVGKLDEALELFHSLVSDGC--GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
               + I+ LCK+  ++KA     E        L D   LVN +          + N L+
Sbjct: 67  HLVNITIDSLCKSDMIDKAESWFQE--------LKDFRGLVNTV----------SYNILI 108

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           N F +  +++ AI LF EM   GC+P+  +YNTLI GLC+VER GEA  F + +L  G  
Sbjct: 109 NAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAG 168

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
              ITY++L++G C++ ++  A++L  + + +G       YN +I  L   GK+ +A   
Sbjct: 169 ASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELF 228

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           ++ M+K    P  VT+  L+DGL K     +A EI+   LE    P ++  +  + G C 
Sbjct: 229 FNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCK 288

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
              + +A+        RG  P  ++ +IL+  +
Sbjct: 289 YGGVDEAWRIFELMTNRGCTPNDVSCNILINGL 321



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 180/379 (47%), Gaps = 29/379 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKRFLNSLWEK 129
           +I A+ K    D+A+ +F  M    GC           G LCR  +  +A++F   L   
Sbjct: 107 LINAFCKTKRIDEAIQLFGEMKAP-GCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSS 165

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G      +Y  +++G  K+  +  A+ + +E+  RG       YN +ID  FKKG    A
Sbjct: 166 GAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEA 225

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +  + R+  +  V P  VT+ V+I+GLCK  R     E++    ++            + 
Sbjct: 226 ELFFNRM-EKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMD 284

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
           G CK G V+ A R++  M   G   + V+ N +I+G C+A ++ +  E++ EV+ R+   
Sbjct: 285 GFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKP 344

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV+Y+  + GL    +VD+A  +  +L +K    D   +  LI+GLC  G L++A ++ 
Sbjct: 345 DVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVF 404

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            EV+                M   GC  N +TCN L+NGF  A +L+ A  LF+    +G
Sbjct: 405 -EVD----------------MRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERG 447

Query: 429 CSPTVVSYNTLINGLCKVE 447
             P   +++ + N   K E
Sbjct: 448 VQPDCRTFSAMANNTAKTE 466


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 265/541 (48%), Gaps = 33/541 (6%)

Query: 95  VFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLK---PDVYSYGTVI 142
           + +RM+E+ GC   ++         C + + E+A   L+ + +  ++   P++ SY TVI
Sbjct: 153 LLRRMSEL-GCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NG    G +  A  +F +M ++G+  NVV Y I+IDG  K     RA+ ++++++ +  V
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI-DKGV 270

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN+VTY  +I+G    G++ E + M   M  +  E D FTY   +  LCK G    A +
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLL 321
           ++  M+  GI  D   Y  ++ G+   G + E     ++M   G   N   +NI+     
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           +   + EA+ I+  +R++  + +   +  LI+ LCK                   GR+ D
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCK------------------LGRVDD 432

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A    N+M   G   N     SL+ G     K E A  LF EM  +G  P VV +NT++ 
Sbjct: 433 AELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMC 492

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC   R  +A   +  M   G +PD+I+Y+ LI G C   K D A KL    L  G  P
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   YN L+HG C  G+++DA  ++  M      P +VTYNT++ GLFKT    +A E++
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            +++    +  I +YNI L GL   + + +A +       + +    IT++I++ A++ +
Sbjct: 613 LNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKD 672

Query: 622 G 622
           G
Sbjct: 673 G 673



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 254/510 (49%), Gaps = 22/510 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRA 189
           + PDV++Y  ++    + G L    A F  + + G    +VV  N L+ G         A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK---DSFTYCS 246
             +  R + E    PNVV+YN ++ G C   R +E LE+   M   +      +  +Y +
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I+G    G V+ A  ++ +M + GI  + VTY  +IDG C+A  +     +++ M  KG
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N+V+Y  LI G L  G+  E + + + +       D  T+G+L++ LCK G   +A 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           ++ + +   G                 +G L++  S ++ M  +G   N Y  N +   F
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + + +  A+ +F +M ++G SP VV+Y TLI+ LCK+ R  +A     +M+ +G  P++
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + ++ L+ GLC   K + A +L  + + +G  P+V  +N ++  LC+ G+V  A +L   
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++    P++++YN L+ G    G  D+A ++ + +L   L+P+  +YN  L G C   R
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + DA+    + L  GI P  +T++ ++  +
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGL 599



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 259/528 (49%), Gaps = 28/528 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           VI    K  + D+A  VFQ+M +         + C         Q+++  R L  +   G
Sbjct: 245 VIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHG 304

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L+PD ++YG +++ L K G    A  +FD M  +G++ +V  Y I++ G+  KG      
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH 364

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
              + L++   + PN   +N++     K     E ++++++M++     +   Y + I  
Sbjct: 365 SFLD-LMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDA 423

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           LCK G V+ AE  + +M+  G+  + V + +++ G C   K ++  EL+  M  +G   N
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV +N ++  L   G+V +A  + +L+       D  ++  LI G C             
Sbjct: 484 VVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCL------------ 531

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                  G+  +A+ L++ M   G K N  T N+L++G+ +  ++++A  +F+EM   G 
Sbjct: 532 ------VGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGI 585

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P VV+YNT+++GL K  RF EA      M+  G +  + TY++++NGL ++  +D ALK
Sbjct: 586 TPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALK 645

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +      K    D+  +NI+I  L   G+ EDA+ L++ +     VP++ TY  + + L 
Sbjct: 646 MFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLI 705

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + G  ++   +++ + +    P+ +  N  ++ L     +S A  +L+
Sbjct: 706 EEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLS 753



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 223/483 (46%), Gaps = 19/483 (3%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC+K +  +A++  +S+  KG+KPDV  YG +++G    G L    +  D M 
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV 371

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G+  N   +NI+   F KK     A +I+ ++  +  + PNVV Y  +I+ LCK GR 
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRV 430

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+    +++M       +   + S ++GLC     E A  ++ EMV  GI  + V +N +
Sbjct: 431 DDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +   C  G++ +   L ++M R G   +++SYN LIRG    GK DEA  + +++     
Sbjct: 491 MCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             +  T+  L++G C++G ++ A  +  E+   G                   R ++A  
Sbjct: 551 KPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE 610

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L   M   G + + YT N ++NG  + + ++ A+ +F+ +  K     ++++N +I  L 
Sbjct: 611 LYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  R  +A +    +   G  PD+ TY L+   L +   ++    +  +  + G  P+  
Sbjct: 671 KDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSL 730

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           M N L+  L   G +  A    S + ++N      T + L+    +     K+L    H 
Sbjct: 731 MLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHF 790

Query: 565 LEE 567
           L E
Sbjct: 791 LNE 793



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 242/550 (44%), Gaps = 68/550 (12%)

Query: 141 VINGLVKSGDLL--GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI------ 192
           +I    ++G L    AL +FDE        +++ +N L+           +         
Sbjct: 19  IIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSC 78

Query: 193 WERLVME--TSVYPNVVTYNVMINGLCKCGRFDECLEMWDR-MKKNEREKDSFTYCSFIH 249
           + R++ +  + V P+V TY++++   C+ GR +     +   +K   R  D       + 
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 250 GLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG----R 304
           GLC A  V E    + R M E G   + V+YN ++ GFC   + +E  EL  +M     R
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               N+VSYN +I G    G+VD+A +++  + ++    +  T+ ++I+GLCK   +++A
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 365 IQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +  ++ + G                  G+  +   ++  M  HG + + +T   L++ 
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING------------------------- 442
             +  K   A  LF  M RKG  P V  Y  +++G                         
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 443 ----------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
                       K    GEA     +M ++G  P+++ Y+ LI+ LC+  ++D A     
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           Q + +G  P++ ++  L++GLC+  K E A +L+  M  +   PN+V +NT+M  L   G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              KA  + + +     RPDIISYN  ++G C   +  +A + L+  L  G+ P   T++
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558

Query: 613 ILVRAVMNNG 622
            L+     +G
Sbjct: 559 TLLHGYCRDG 568



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 125/250 (50%), Gaps = 8/250 (3%)

Query: 384 SLVNRMDKHGCK---LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVVSYNTL 439
           S  NRM +  C     + +T + L+  F +  +LE+    F  + + G     VV  N L
Sbjct: 77  SCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRL 136

Query: 440 INGLCKVERFGEAYS-FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ-- 496
           + GLC  +R GEA    ++ M E G  P++++Y+ L+ G C   + + AL+L        
Sbjct: 137 LKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQ 196

Query: 497 -KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +   P++  YN +I+G  + G+V+ A  L+ +M  +   PN+VTY  ++DGL K    D
Sbjct: 197 VRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVD 256

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A  ++  ++++ +RP+I++Y   + G  S  +  +    L +    G+ P   T+ +L+
Sbjct: 257 RAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLL 316

Query: 616 RAVMNNGAST 625
             +   G  T
Sbjct: 317 DYLCKKGKCT 326


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 298/589 (50%), Gaps = 47/589 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRIL------ELIEIQKCYCPEDVALSVIQAYGKNSMPDKAL 93
            FH +  + + P  V + S I        L E ++ +   +   SV  AY  N+M     
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM----- 59

Query: 94  DVFQRMNEIFGC-EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                   I G   AG      +FE A + L  L E+G  P V S+ +++  L K   + 
Sbjct: 60  --------IMGYGSAG------RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 105

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            AL++F E+ ++  E N   YNI+ID     G    A  I + +    S++PN++T N+M
Sbjct: 106 EALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIM 163

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++ LCK  + +E  ++++   +     D  TYCS I GL K G V+ A R++ +M+++G 
Sbjct: 164 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 223

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             + V Y ++I  F   G+ ++  ++++ + R+GC  ++   N  +  + + G+V++   
Sbjct: 224 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 283

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           I+E +R      D  ++ +LI+GL K                 G+ R  + +++ + M +
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTK----------------AGQAR--ETSNIFHAMKQ 325

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  L+A   N++++GF ++ K+  A  + +EM  K   PTV +Y  +++GL K++R  E
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 385

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           AY   +E   KG + +++ YS LI+G  +  +ID A  +  + ++KG TP+V  +N L+ 
Sbjct: 386 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 445

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            L  A ++ +AL  + +MK+  C PN  TY+ L++GL +    +KA   W  + ++ L P
Sbjct: 446 ALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 505

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++++Y   + GL     ++DA+         G +P   +++ L+  + N
Sbjct: 506 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 554



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 271/528 (51%), Gaps = 26/528 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC---YNI 175
           A +F + L  +GLKPD  SY ++I  L K+G L  A  +F +M     E +V C   YN 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM---EAERSVPCAYAYNT 58

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I G+   G +  A ++ ERL  E    P+VV++N ++  L K  + DE L +++ MKK+
Sbjct: 59  MIMGYGSAGRFEDAYKLLERL-RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 117

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E +S TY   I  LC  G VE A R+  EM  + +F + +T N M+D  C+A K++E 
Sbjct: 118 A-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 176

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           ++++E   ++GC  + V+Y  LI GL + G+VDEA  ++E + +   NA+   +  LI  
Sbjct: 177 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 236

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
              +G      +I  E+   G                  G +     +   +  +G   +
Sbjct: 237 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 296

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             + + L++G  +A +      +F  M ++G +    +YN +++G CK  +  +AY  ++
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 356

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM EK  +P + TY  +++GL +  ++D A  L  +   KG   +V +Y+ LI G    G
Sbjct: 357 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++++A  +   M K+   PN+ T+N+L+D L K  + ++AL  +  + E +  P+  +Y+
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 476

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           I + GLC   + + AF F  D   +G++P  +T+  ++  +   G  T
Sbjct: 477 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 524



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 36/165 (21%)

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLC------------------------------- 514
           MA K   +   +G  PD   Y  +I  LC                               
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 515 ----SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
               SAG+ EDA +L   +++R C+P++V++N+++  L K    D+AL ++  ++++   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           P+  +YNI +  LC   R+ +A+  L++     + P  +T +I+V
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 164


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 173/628 (27%), Positives = 301/628 (47%), Gaps = 37/628 (5%)

Query: 2   VISAKRLL--NLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           VI+  +LL   L    + P  AL  F     +PG+  S + F  IL+ L+D  L+     
Sbjct: 101 VITDPQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYW 160

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------NEIFGCEA--GILC 111
           ++E I   + Y   DV +     Y       + L VF++M       ++  C     IL 
Sbjct: 161 VMERIISFEMYGIVDVLIGGYLNY-------QCLLVFEKMMRNRFLPDVKNCNRILKILR 213

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
            K    KA      + E G++P V +Y T+++   K G++  AL +  +M ERG   + V
Sbjct: 214 DKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEV 273

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            +N+LI+G  KKG+  +AK + + +  +  +  +  TYN +I G CK G   E L +W+ 
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMA-KAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M          ++ + ++G CK G +  A +   +M++  +  D ++YN +I GFCR G 
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 292 IKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I E F L  E+  R    N+V+YN LI GL   G ++ A+ + E +  +  + D  T+ V
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L+NG CK G +  A +  +E                  M   G   + +   + + G ++
Sbjct: 453 LVNGACKLGNMLMAKEFFDE------------------MLHVGLAPDQFAYTARIVGELK 494

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                 A  L +EM  KG  P V++YN  +NGLCK+    EA   +++M+  G  PD +T
Sbjct: 495 LGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVT 554

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+  ++   ++  +    ++    L +G TP V  Y +LIH     G+++ A+  +  M+
Sbjct: 555 YTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQ 614

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           ++  VPN++TYN L++G  K    D+A + +  + E+ + P+  +Y I +   C+  +  
Sbjct: 615 EKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQ 674

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAV 618
           +A       L + I P + T   L++ +
Sbjct: 675 EALRLYAQMLGKRIRPDSCTHGALLKKL 702



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 239/506 (47%), Gaps = 28/506 (5%)

Query: 119 AKRFLN-SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A RF    L + G K   Y++  ++  LV +  +  A  V + +    +   V   ++LI
Sbjct: 122 ALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIV---DVLI 178

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G+       +   ++E++ M     P+V   N ++  L       + LE++  M +   
Sbjct: 179 GGYLN----YQCLLVFEKM-MRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGI 233

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                TY + +H  CK G V+ A  +  +M E G +   VT+N +I+G  + G++++   
Sbjct: 234 RPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKG 293

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L + M + G  ++  +YN LI G  + G + EA+++WE +  +  +    +H  ++ G C
Sbjct: 294 LIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFC 353

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                  EG+++DA   ++ M K     +  + N+L+ GF +   +  
Sbjct: 354 K------------------EGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGE 395

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L  E+  +  S  +V+YNTLI+GLC++     A    ++M+ +G  PD++TY++L+N
Sbjct: 396 AFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+   + MA +   + L  G  PD   Y   I G    G    A +L   M  +   P
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +++TYN  ++GL K G+ ++A E+   ++ +   PD ++Y   +        + +  E  
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
            D L RG  PT +T+ +L+ A   NG
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNG 601



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
              + +     +  +G  P V +Y  +I+    +G L  A+A F EM E+GV  NV+ YN
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           +LI+GF K     +A + +  +  E  ++PN  TY ++IN  C  G++ E L ++ +M  
Sbjct: 627 VLINGFCKVRKMDQACKFFIEM-QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
                DS T+ + +  L K   V+  + +   +++    +DA T
Sbjct: 686 KRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 257/539 (47%), Gaps = 27/539 (5%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           F+  N +    A   C        +R L       + P  +++G     L + G    AL
Sbjct: 145 FRSYNAVLSTLARADCHADALLLYRRML----RDRVPPTTFTFGVAARALCRLGRARDAL 200

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           A+   M   G   + V Y  +I     +G    A  + + +++      +V T+N ++ G
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL-MGCAADVNTFNDVVLG 259

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC  G   E   + DRM  +       TY   + GLC+    + A  +   + E    V+
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPE----VN 315

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            V  N +I G    GK+    EL+E+MG KGC  +V +YNIL+ GL + G+   A+ + +
Sbjct: 316 VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLD 375

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            + EK C  +  T+  L++  C+NG  + A  +L+++   G                 +G
Sbjct: 376 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDG 435

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L +A  LV  M   GCK +  T N+++       +++ A  +F  +  +G     ++YN
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLI+ L    R+ E      EM+  G   D+++Y+ LI  LC+   +D ++ L  + + K
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK 555

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P+   YN+LI+ LC AGKV DAL+L   M  +   P++VTYNTL++GL K G    A
Sbjct: 556 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 615

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           L +   +  E + PDI++YNI +   C    + DA   L+ A+  GI+P   TW ++V+
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 259/611 (42%), Gaps = 78/611 (12%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREP-----------------GYAHSPHLFHHILRRL 48
           + +L  + A  +P  ALAL DS  R                       + HL   + RR 
Sbjct: 80  RPILASVGAAGDPDRALALLDSLPRSSRLPPLRESLLLPLLRSLPPGRALHLLDQMPRRF 139

Query: 49  IDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG 108
                    + +L  +    C+     AL + +   ++ +P             FG  A 
Sbjct: 140 AVTPSFRSYNAVLSTLARADCHAD---ALLLYRRMLRDRVPPTTF--------TFGVAAR 188

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LCR  +   A   L  +   G  PD   Y TVI+ LV  G +  A  + DEM   G   
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE---- 224
           +V  +N ++ G    G    A  + +R++M     P+VVTY  ++ GLC+  + DE    
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMH-GCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 225 ------------------CL---------EMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
                             CL         E+++ M       D  TY   +HGLCK G  
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A R+  EM E G   + VTY+ ++  FCR G   +   + + M  KG  +N   YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-NEVEEG- 374
           I  L ++GK+DEA+ + + ++ + C  D  T+  +I  LC N  +++A  I  N +EEG 
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 375 ---------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            GR  +   L N M  HGC L+  + N L+    +   ++ ++ 
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L +EM  KG  P   SYN LIN LCK  +  +A    KEML +G  PD++TY+ LINGLC
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +      AL L  +   +   PD+  YNILI   C    ++DA  L         VPN  
Sbjct: 608 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNER 667

Query: 540 TYNTLMDGLFK 550
           T+  ++    +
Sbjct: 668 TWGMMVQNFVR 678



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 242/502 (48%), Gaps = 23/502 (4%)

Query: 118 KAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           +A   L+ +  +  + P   SY  V++ L ++     AL ++  M    V      + + 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
                + G    A  +   +     V P+ V Y  +I+ L   G   E   + D M    
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCV-PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D  T+   + GLC  G+V  A R+   M+  G     VTY  ++ G CR    ++  
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT---RQAD 302

Query: 297 ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           E + ++GR   +NVV  N +IRG L  GK+  A  ++E++  K C  D  T+ +L++GLC
Sbjct: 303 EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G    A+++L+E+EE                   GC  N  T ++L++ F +    ++
Sbjct: 363 KLGRCGSAVRMLDEMEE------------------KGCAPNIVTYSTLLHSFCRNGMWDD 404

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +  +MS KG S     YN +I  L K  +  EA   V+EM  +G KPD+ TY+ +I 
Sbjct: 405 ARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIY 464

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC + ++D A  +    L++G   +   YN LIH L  +G+ ++ L+L + M    C  
Sbjct: 465 HLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++V+YN L+  L K G+ D+++ +   ++ + ++P+  SYN+ +  LC   ++ DA E  
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584

Query: 597 NDALCRGILPTTITWHILVRAV 618
            + L +G+ P  +T++ L+  +
Sbjct: 585 KEMLNQGLTPDIVTYNTLINGL 606


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 254/531 (47%), Gaps = 21/531 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  E AK+ +  + E G   +V +Y T+I GL ++G +  A     EM + G+  + 
Sbjct: 254 CKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDG 313

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y  +I+G  K+G   +AK + + +     + PNVV Y+ +I+G  + G  DE  ++  
Sbjct: 314 FTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVVYSTLIDGFMRQGNADEAFKIVK 372

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M     + +  TY + I GLCK G +  A R+ ++M + G   D +TYN +I+G  R  
Sbjct: 373 EMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQH 432

Query: 291 KIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +E F L   M RKG +  NV +Y+I+I GL + G+ + A  + E +       ++  +
Sbjct: 433 NKEEAFLLLNEM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491

Query: 349 GVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDK 391
             LI+G C+ G  + A + L ++                      G++ +A    + M +
Sbjct: 492 APLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + N +T   L++G+  A  LE A  L  +M   G +P    Y  ++ G  K +   +
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
             S +K MLEKG  PD   Y ++I+ L  S  +  A+ +     + G  PD  +Y  LI 
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C A  +E A+ L   M K+   P +  YN L+DG  K+ D   A  I+N I+ + L P
Sbjct: 672 GFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++Y   + G C    + DA +  N+ L  G+ P    + +L     N+G
Sbjct: 732 NCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 276/600 (46%), Gaps = 65/600 (10%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE---------AGILCRKRQFEKAKRFLNSLWE 128
           ++I+AY K    + A  V + M E  GC           G LCR    E+A  +   + +
Sbjct: 248 TLIEAYCKVRDLESAKKVVEEMRET-GCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMED 306

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GL PD ++YG +INGL K G    A  + DEM   G+  NVV Y+ LIDGF ++G+   
Sbjct: 307 YGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADE 366

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-------------------------- 222
           A +I + +     V PN +TY+ +I GLCK GR                           
Sbjct: 367 AFKIVKEMS-AAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425

Query: 223 ---------DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
                    +E   + + M+K     + +TY   I+GLC+ G  E A  +  +M+  G+ 
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            +A  Y  +I G+CR G      E  + M R+    ++  YN LI GL   GK+DEAI  
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------EG--- 377
           ++ + EK    +  T+G LI+G    G L KA Q+L+++   G            EG   
Sbjct: 546 YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFK 605

Query: 378 --RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
              L   +S +  M + G   +      +++    +  ++ A+ +   + + G  P  + 
Sbjct: 606 SDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLI 665

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y +LI+G CK     +A   + EM +KG +P +  Y+ LI+G C+S  I  A  +    +
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG  P+   Y  LI G C AG + DA+ LY+ M      P+   Y+ L  G   +GD  
Sbjct: 726 CKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQ 785

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +AL I   ++  R    I S+N  + G C   ++ +  +FL+  + + I+P+ +T   +V
Sbjct: 786 QALFITEEMIA-RGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIV 844



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 235/451 (52%), Gaps = 21/451 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R+   E+A   LN + + G+ P+VY+Y  +INGL + G+   A  + ++M   G++ N  
Sbjct: 430 RQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAF 489

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI G+ ++G +  A E  +++  E ++ P++  YN +I GL   G+ DE +E +D 
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRE-NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   + + FTY   IHG   AGN+E AE++  +M+ SG+  +   Y  +++G+ ++  
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +++     + M  KG + +   Y I+I  L  +G +  A+S+  ++ +     DS  +G 
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G CK   + KA+ +L+E                  M K G +      N+L++GF +
Sbjct: 669 LISGFCKAADMEKAVGLLDE------------------MAKKGIEPGISCYNALIDGFCK 710

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  + +A  +F  +  KG  P  V+Y TLI+G CK     +A     EML +G  PD   
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFV 770

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS+L  G   S  +  AL +  + + +G+   ++ +N L+HG C  GK+++ ++    M 
Sbjct: 771 YSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMM 829

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            ++ VP+L+T   ++ GL + G   +A  I+
Sbjct: 830 DKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 214/443 (48%), Gaps = 20/443 (4%)

Query: 193 WE-RLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           W+ R  ME   + P+V TY+ +I   CK    +   ++ + M++     +  TY + I G
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           LC+AG +E A    +EM + G+  D  TY A+I+G C+ G+  +   L + M   G + N
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV Y+ LI G +  G  DEA  I + +       +  T+  LI GLCK G + +A +IL 
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 370 EVEEGG------------EGRL-----ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           ++ + G            EG L      +A  L+N M K G   N YT + ++NG  Q  
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           + E A  L ++M   G  P    Y  LI+G C+   F  A   +K+M  +   PD+  Y+
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI GL    K+D A++   + L+KGF P+   Y  LIHG   AG +E A QL   M   
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              PN   Y  +++G FK+ + +K       +LE+ L PD   Y I +  L S   M  A
Sbjct: 588 GLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAA 647

Query: 593 FEFLNDALCRGILPTTITWHILV 615
              L+     G++P ++ +  L+
Sbjct: 648 VSVLSVIEKNGLVPDSLIYGSLI 670



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 19/352 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M  +GI  D  TY+ +I+ +C+   ++   ++ E M   GC LNVV+YN LI GL   G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           ++EA    + + +     D  T+G +INGLCK                   GR   A  L
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCK------------------RGRPDQAKCL 335

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           ++ M   G   N    ++L++GF++    + A  + KEMS  G  P  ++Y+ LI GLCK
Sbjct: 336 LDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCK 395

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           + R G A   +K+M + G+  D +TY+L+I G  +    + A  L  +  + G +P+V  
Sbjct: 396 LGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYT 455

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y+I+I+GLC  G+ E A  L   M      PN   Y  L+ G  + G    A E    + 
Sbjct: 456 YSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMT 515

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E L PD+  YN  + GL +  +M +A E+ ++ L +G  P   T+  L+  
Sbjct: 516 RENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHG 567



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 175/349 (50%), Gaps = 34/349 (9%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
            L H +L   ++P   ++ ++ILE     K    E V+ ++     K  MPD        
Sbjct: 579 QLLHQMLNSGLNPNDFIY-AQILE--GYFKSDNLEKVSSTLKSMLEKGLMPD-------- 627

Query: 99  MNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
            N ++G     L      + A   L+ + + GL PD   YG++I+G  K+ D+  A+ + 
Sbjct: 628 -NRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLL 686

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           DEM ++G+E  + CYN LIDGF K  D   A+ I+  ++ +  + PN VTY  +I+G CK
Sbjct: 687 DEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK-GLPPNCVTYTTLIDGYCK 745

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G   + +++++ M       D+F Y     G   +G+++ A  +  EM+  G  + + +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-S 804

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           +N ++ GFC+ GK++E  +   VM  K  + ++++   ++ GL E GK+ EA +I+  L+
Sbjct: 805 FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQ 864

Query: 338 EKNCNADSTTH-----------GV--------LINGLCKNGYLNKAIQI 367
           +KN +   T H           G+        +I   CK GYL+KA+ +
Sbjct: 865 QKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALML 913



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 120/236 (50%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M+  G   + YT ++L+  + +   LE+A  + +EM   GCS  VV+YNTLI GLC+   
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA+ + KEM + G  PD  TY  +INGLC+  + D A  L  +    G  P+V +Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI G    G  ++A ++   M      PN +TY+ L+ GL K G   +A  I   + +  
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              D ++YN+ ++G        +AF  LN+    GI P   T+ I++  +   G S
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGES 469



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 19/362 (5%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLL 321
           V+R +  S      V  + ++D + + G++++  E+  +M   G   ++   N L++ LL
Sbjct: 160 VHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLL 219

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
               +D    +   +     + D  T+  LI   CK   L  A +++ E+ E        
Sbjct: 220 RADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRE-------- 271

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      GC LN  T N+L+ G  +A  +E A    KEM   G  P   +Y  +IN
Sbjct: 272 ----------TGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIIN 321

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLCK  R  +A   + EM   G  P+++ YS LI+G  +    D A K+  +    G  P
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQP 381

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   Y+ LI GLC  G++  A ++   M K   + + +TYN +++G  +  + ++A  + 
Sbjct: 382 NKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL 441

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           N + +  + P++ +Y+I + GLC       A   L   +  G+ P    +  L+      
Sbjct: 442 NEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCRE 501

Query: 622 GA 623
           G+
Sbjct: 502 GS 503



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 1/262 (0%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +    EK    L S+ EKGL PD   YG VI+ L  SG +  A++V   + + G+  + +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LI GF K  D  +A  + + +  +  + P +  YN +I+G CK         +++ 
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMA-KKGIEPGISCYNALIDGFCKSDDISHARNIFNS 723

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +       +  TY + I G CKAG++  A  +Y EM+  G+  DA  Y+ +  G   +G 
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +++   + E M  +G   + S+N L+ G  + GK+ E +    ++ +K+      T   +
Sbjct: 784 LQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843

Query: 352 INGLCKNGYLNKAIQILNEVEE 373
           + GL + G L++A  I  E+++
Sbjct: 844 VIGLGEAGKLSEAHTIFVELQQ 865


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 268/536 (50%), Gaps = 52/536 (9%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P+ Y++  +I  L  SG L  A  +FD+M E+G E N   + IL+ G+ + G   + 
Sbjct: 51  GVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKG 110

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E+   +       PN V YN +I+  CK G+ D+  ++ D M+K+    D  T+ + I 
Sbjct: 111 LELLGEM-RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARIS 169

Query: 250 GLCKAGNVEGAERVYREMVESGIF----VDAVTYNAMIDGFCRAGKIKECFELWEVMG-R 304
            LC +G V  A R++R+M    +      + +TYN M+ GFC+ G ++E   L+E M   
Sbjct: 170 ALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVS 229

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           +  +N  SYNI + GL+  GK+ EA  + + + +     +  ++ ++++GLCKNG L  A
Sbjct: 230 ENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA 289

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             ++  +   G                  G++++A +++  M + GC  N YTCN L+  
Sbjct: 290 RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYS 349

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK-- 465
             +  ++  A  L ++M+ KG     V+ N +I+GLC   +  +A   V  M   G    
Sbjct: 350 LWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAAL 409

Query: 466 ---------------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                                PD+I+YS +I+GLC++ ++  A K   + + K   PD  
Sbjct: 410 GNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSA 469

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y++ IH  C  GK+  A ++  +M+K+ C   L TYN+L+ GL   G  ++  EI+  I
Sbjct: 470 IYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGL---GSKNQIFEIYGLI 526

Query: 565 LEERLR---PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E R R   PD+  YN  L  LC   R+ DA   L++ L +GI P   ++ IL++A
Sbjct: 527 DEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 261/543 (48%), Gaps = 46/543 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G+LC     + A+   + + EKG +P+ YS+G ++ G  ++G     L +  EM 
Sbjct: 59  FNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMR 118

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G   N V YN LI  F K+G    A+++ + +  +  + P+VVT+N  I+ LC  G+ 
Sbjct: 119 RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEM-RKDGLSPDVVTFNARISALCSSGKV 177

Query: 223 DECLEMWDRMKKNE----REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            E   ++  M+ +E     + +  TY   + G CK G +E A  ++ +M  S   ++  +
Sbjct: 178 LEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES 237

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN  + G  R GK+ E   + + M   G   NV SYNI++ GL +NG + +A  +  L+ 
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMT 297

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
                 D+ T+  L++G C  G +++A  +L E+   G                 EGR++
Sbjct: 298 SSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM---------------- 424
           +A  L+ +M++ G  ++  TCN +++G     KL+ AI +   M                
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 425 -------SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                  SRK C P ++SY+T+I+GLCK  R GEA     EM+ K  +PD   Y + I+ 
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+  KI  A ++     +KG    +  YN LI GL S  ++ +   L   M++R   P+
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +  YN ++  L + G    A  + + +L++ + P+I S++I +K  C     S   E   
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597

Query: 598 DAL 600
            AL
Sbjct: 598 IAL 600



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/639 (23%), Positives = 290/639 (45%), Gaps = 90/639 (14%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDK 91
           G +   + F+ ++  L D   +     + + +  + C  P + +  + ++ Y +     K
Sbjct: 51  GVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCE-PNEYSFGILVRGYCRAGFTSK 109

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
            L++   M          ++       C++ + + A++ ++ + + GL PDV ++   I+
Sbjct: 110 GLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARIS 169

Query: 144 GLVKSGDLLGALAVFDEMFERGV----ETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            L  SG +L A  +F +M    V    + N++ YN+++ GF K+G    A+ ++E++ + 
Sbjct: 170 ALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVS 229

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
            ++  N  +YN+ + GL + G+  E   +   M     E + ++Y   + GLCK G +  
Sbjct: 230 ENLM-NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFD 288

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A  + R M  SG+  D VTY  ++ G+C  GK+ E   +   M R GC  N  + NIL+ 
Sbjct: 289 ARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLY 348

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L + G++ EA  + + + EK    D+ T  ++I+GLC NG L+KAI+I+N +   G   
Sbjct: 349 SLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAA 408

Query: 379 LADAAS----LVNRMD-KHGCKLNAYTCNSLMNG-------------------------- 407
           L +  +    LV+  D +  C  +  + +++++G                          
Sbjct: 409 LGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDS 468

Query: 408 ---------FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
                    F +  K+ +A  + K+M +KGC+ T+ +YN+LI GL    +  E Y  + E
Sbjct: 469 AIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDE 528

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA-- 516
           M E+G  PD+  Y+ +++ LC+  ++  A  +  + LQKG +P+++ ++ILI   C A  
Sbjct: 529 MRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACD 588

Query: 517 --------------------------------GKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                                           G+V  A +L+     R+       Y  L
Sbjct: 589 FSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDL 648

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +D L K    D A  I + ++++    D  S+   + GL
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGL 687



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 225/482 (46%), Gaps = 47/482 (9%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++  YN+L+    K+G       + + +V  + V P   T+NV+I  LC  G  D+  E+
Sbjct: 20  SIYLYNVLLRSCTKEGRVDCVSWLCKDMVA-SGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D+M +   E + +++   + G C+AG       +  EM   G   + V YN +I  FC+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 289 AGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNC----NA 343
            GK  +  +L + M + G   +VV++N  I  L  +GKV EA  I+  ++          
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+ +++ G CK                  EG L +A +L  +M      +N  + N 
Sbjct: 199 NIITYNLMLGGFCK------------------EGMLEEARALFEKMKVSENLMNRESYNI 240

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            + G ++  KL  A  + KEM   G  P V SYN +++GLCK     +A   ++ M   G
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD +TY+ L++G C + K+  A  +  + ++ G +P+    NIL++ L   G++ +A 
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAE 360

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI----WNH---------------- 563
           +L   M ++  V + VT N ++DGL   G  DKA+EI    W H                
Sbjct: 361 ELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLV 420

Query: 564 ---ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 ++  PD+ISY+  + GLC   R+ +A +   + + + + P +  + + + +   
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480

Query: 621 NG 622
            G
Sbjct: 481 EG 482



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 247/582 (42%), Gaps = 84/582 (14%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
            L  S  +E     +  L   + +  + P +V   +RI  L       C     L   + 
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISAL-------CSSGKVLEASRI 183

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           + ++   D+ L + Q     +    G  C++   E+A+     +       +  SY   +
Sbjct: 184 F-RDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWL 242

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            GLV+ G LL A  V  EM + G+E NV  YNI++DG  K G    A+ +  RL+  + V
Sbjct: 243 LGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLM-RLMTSSGV 301

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ VTY  +++G C  G+  E   +   M ++    +++T    ++ L K G +  AE 
Sbjct: 302 LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEE 361

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-------------------- 302
           + ++M E G  +D VT N +IDG C  GK+ +  E+   M                    
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421

Query: 303 ---GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
               RK C+ +++SY+ +I GL + G+V EA   +  +  KN   DS  + V I+  CK 
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481

Query: 359 GYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTC 401
           G ++ A ++L ++E+                 G + ++ +   L++ M + G   +    
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG----------- 450
           N++++   +  ++++A  +  EM +KG SP + S++ LI   CK   F            
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALN 601

Query: 451 -----------------------EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
                                  +A    +  L++ +      Y  LI+ LC+ +K+D A
Sbjct: 602 VCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             +  + + KG+  D   +  +I GL   G   +A +L   M
Sbjct: 662 SGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 169/580 (29%), Positives = 280/580 (48%), Gaps = 30/580 (5%)

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           E+IE+   Y P + A+S +I+   K    + A ++  ++ +        ++      LC+
Sbjct: 320 EMIELG--YVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCK 377

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             + E+A+   + + E+GL P+  +Y  +I+G  +   L  A   F++M E G+   V  
Sbjct: 378 TGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYS 437

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN +I+   K G  M+  E+  + +++  + P V TY  +I+G CK G   +  +++  M
Sbjct: 438 YNSMINCQCKFGK-MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  ++ T+ + I GLC+   +  A +++ EMVE  I  + VTYN +I+G CR G  
Sbjct: 497 TGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNT 556

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
              FEL + M +KG   +  +Y  LI GL   G+V EA      L  K+   D   +  L
Sbjct: 557 TRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616

Query: 352 INGLCKNGYLNKAIQILNE-VEEGGEGRLADAASLVN---------------RMDKHGCK 395
           + G CK G + +A+    E V  G +  L   A L++                M   G +
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQ 676

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +      L++GFI++  L+ A   +  M  +G  P  V+Y  L+NGL K     EA   
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            K ML     P+ ITY   ++ L +   ++ AL+L    LQ  F   VT YNILI G C 
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT-YNILIRGYCQ 795

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK ++A +L   M     VP+ +TY+T +    K G+ D A+++W  +L+  L+PD + 
Sbjct: 796 IGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVV 855

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +N  +   C    +  A +  ND + RG+ PT  T+H L+
Sbjct: 856 FNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 245/500 (49%), Gaps = 20/500 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +N + + GL P+V +   ++N L +       L +FD +   GV+ +   Y +++    +
Sbjct: 178 VNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCE 237

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             D+ +AKEI  +         ++VTYNV INGLCK  R  E +E+   + +   + D  
Sbjct: 238 LKDFNKAKEIINQ-AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLV 296

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TYC+ + GLC+    E    +  EM+E G        + +I+G  + G I+  FEL   +
Sbjct: 297 TYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKV 356

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           G+ G + N+  YN +I  L + GK++EA  ++ ++ E+  N +  T+ +LI+G       
Sbjct: 357 GKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF------ 410

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                       G   +L  A    N+M + G     Y+ NS++N   +  K++ A  LF
Sbjct: 411 ------------GRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF 458

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           KEM  KG  PTV +Y +LI+G CK     +A+    EM  KG  P+ +T++ LI GLCQ 
Sbjct: 459 KEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI 518

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K+  A KL  + ++    P+   YN+LI G C  G    A +L   M K+   P+  TY
Sbjct: 519 NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+ GL  TG   +A E  N +  +  R D + Y   L+G C   R+ +A     + + 
Sbjct: 579 RPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVG 638

Query: 602 RGILPTTITWHILVRAVMNN 621
           RG+    +++ +L+   +N 
Sbjct: 639 RGLQMDLVSYAVLISGALNQ 658



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 243/536 (45%), Gaps = 30/536 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R R+F +     ++L   G+KPD Y Y  V+  L +  D   A  + ++    G   +
Sbjct: 200 LARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLS 259

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           +V YN+ I+G  K      +K +WE     R + E  +  ++VTY  ++ GLC+   F+ 
Sbjct: 260 IVTYNVFINGLCK------SKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEV 313

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            +EM D M +             I GL K G++EGA  +  ++ + G+  +   YN+MI+
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C+ GK++E   L+ VM  +G   N V+Y ILI G     K+D A   +  + E   +A
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
              ++  +IN  CK G +  A  +  E+ + G                 +G +  A  L 
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M   G   N  T  +L+ G  Q +K+  A  LF EM      P  V+YN LI G C+ 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
                A+  + EM++KG  PD  TY  LI GLC + ++  A +       K    D   Y
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L+ G C  G++++AL     M  R    +LV+Y  L+ G     D     E+   +  
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHG 672

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++PD + Y I + G      +  AFEF    +  G +P ++T+  LV  +   G
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAG 728



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 53/445 (11%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           L+ +  + P V T + ++N L +  +F + LE++D                         
Sbjct: 180 LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFD------------------------- 214

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
                      +V +G+  D   Y  ++   C      +  E+       GC L++V+YN
Sbjct: 215 ----------TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYN 264

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           + I GL ++ +V EA+ +   L EK   AD  T+  L+ GLC+       +++++E+ E 
Sbjct: 265 VFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIEL 324

Query: 375 GE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  G +  A  L+N++ K G   N +  NS++N   +  KLE A
Sbjct: 325 GYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA 384

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LF  M+ +G +P  V+Y  LI+G  +  +   A+ +  +M+E G    + +Y+ +IN 
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+  K+ MA  L  + + KG  P V  Y  LI G C  G V  A +LY  M  +   PN
Sbjct: 445 QCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPN 504

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            VT+  L+ GL +     +A ++++ ++E ++ P+ ++YN+ ++G C     + AFE L+
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLD 564

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           + + +G+ P T T+  L+  + + G
Sbjct: 565 EMIKKGLSPDTYTYRPLIAGLCSTG 589



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 112/219 (51%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+  ++Q  ++ + + +   M   G  P V + + L+N L ++ +F +       ++  G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            KPD   Y++++  LC+ K  + A ++  Q    G +  +  YN+ I+GLC + +V +A+
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAV 280

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++  ++ ++    +LVTY TL+ GL +  + +  +E+ + ++E    P   + +  ++GL
Sbjct: 281 EVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGL 340

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                +  AFE LN     G++P    ++ ++ ++   G
Sbjct: 341 IKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG 379



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 95/203 (46%)

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F E  +K    +   ++ LI    + +R  +    V  M + G  P++ T S L+N L +
Sbjct: 143 FFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALAR 202

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            +K    L+L    +  G  PD  +Y +++  LC       A ++ +  +   C  ++VT
Sbjct: 203 IRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVT 262

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN  ++GL K+    +A+E+   + E+ L+ D+++Y   + GLC         E +++ +
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322

Query: 601 CRGILPTTITWHILVRAVMNNGA 623
             G +P+      L+  ++  G+
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGS 345


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 260/473 (54%), Gaps = 20/473 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR R+   A   +  + + G +PD  ++ T+INGL   G +  AL + D M E G +  +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  N L++G    G    A  + +R+V ET   PN VTY  ++  +CK G+    +E+  
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M++ + + D+  Y   I GLCK G+++ A  ++ EM   G   D + Y  +I GFC AG
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 291 KIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  +  +L  +++ RK   +VV+++ LI   ++ GK+ EA  + + + ++  + D+ T+ 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK   L+KA  +L+                   M   GC  N  T N L+NG+ 
Sbjct: 357 SLIDGFCKENQLDKANHMLD------------------LMVSKGCGPNIRTFNILINGYC 398

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A+ +++ + LF++MS +G     V+YNTLI G C++ +   A    +EM+ +  +PD++
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y +L++GLC + + + AL++  +  +     D+ +YNI+IHG+C+A KV+DA  L+ ++
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             +   P++ TYN ++ GL K G   +A  ++  + E+   P+  +YNI ++ 
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 259/543 (47%), Gaps = 63/543 (11%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+D+FQ M           F     ++ R +Q++        +  KG+  ++Y+   +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +   L  A +   ++ + G E                                  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYE---------------------------------- 139

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P+ VT++ +INGLC  GR  E LE+ DRM +   +    T  + ++GLC  G V  A 
Sbjct: 140 --PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGL 320
            +   MVE+G   + VTY  ++   C++G+     EL   M  RK  L+ V Y+I+I GL
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++G +D A +++  +  K   AD   +  LI G C                    GR  
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY------------------AGRWD 299

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           D A L+  M K     +    ++L++ F++  KL  A  L KEM ++G SP  V+Y +LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  +A   +  M+ KG  P++ T+++LING C++  ID  L+L  +   +G  
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D   YN LI G C  GK+E A +L+  M  R   P++V+Y  L+DGL   G+ +KALEI
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  I + ++  DI  YNI + G+C+ S++ DA++       +G+ P   T++I++  +  
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539

Query: 621 NGA 623
            G+
Sbjct: 540 KGS 542



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 236/480 (49%), Gaps = 32/480 (6%)

Query: 56  HVSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM-------NEI-FG 104
            VS  LEL++  ++  + P  + L +++     N     A+ +  RM       NE+ +G
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
               ++C+  Q   A   L  + E+ +K D   Y  +I+GL K G L  A  +F+EM  +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + +++ Y  LI GF   G +    ++  R +++  + P+VV ++ +I+   K G+  E
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLL-RDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             E+   M +     D+ TY S I G CK   ++ A  +   MV  G   +  T+N +I+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+C+A  I +  EL+  M  +G + + V+YN LI+G  E GK++ A  +++ +  +    
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  ++ +L++GLC NG   KA++I  ++E                  K   +L+    N 
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIE------------------KSKMELDIGIYNI 497

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G   ASK+++A  LF  +  KG  P V +YN +I GLCK     EA    ++M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P+  TY++LI           + KL  +  + GF+ D +   +++  L S G+++ + 
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 113/211 (53%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K ++A+ LF+EM+R    P ++ ++ L + + + +++       K+M  KG   ++ T S
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C+ +K+ +A     + ++ G+ PD   ++ LI+GLC  G+V +AL+L   M + 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P L+T N L++GL   G    A+ + + ++E   +P+ ++Y   LK +C   + + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E L     R I    + + I++  +  +G+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 255/491 (51%), Gaps = 20/491 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L +K  KP ++ +G ++  LVKS      +++  +M   G+ +++V  +ILI+ F + G 
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              +  +  + +++    PNV+T   +I GLC  G+  + L+  D++       +  +Y 
Sbjct: 123 NPLSFSVLAK-ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYG 181

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I+GLCK G    A ++ R +    +  + V YN +ID  C+   + E F+L+  M  K
Sbjct: 182 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   +VV+YN LI G    GK+ +A  ++  +  +N N +  T  +L++G CK       
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK------- 294

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      E RL +A +++  M K G K + +T NSLM+ +    ++  A  +F  +
Sbjct: 295 -----------ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           S++G +P + SY+ +I+G CK+++  EA +  KEM      PD++TY+ LI+GLC+  KI
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKI 403

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             ALKL  +   +G   D   YN ++  LC   +V+ A+ L + MK     P++ TY TL
Sbjct: 404 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTL 463

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G  + A  ++  +L +    D+  Y   ++G CS     ++ + L+     G 
Sbjct: 464 VDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGC 523

Query: 605 LPTTITWHILV 615
           +P  +T+ I++
Sbjct: 524 IPNAVTYEIII 534



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 249/531 (46%), Gaps = 36/531 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDP---KLVVHVSRILELIEIQKCYC 71
           + N H  ++ F+    +     S   F  IL  L+       VV + R +E   I     
Sbjct: 49  DDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLV 108

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRF 122
              + ++     G+N +    L    +M    G E  +         LC K Q  +A +F
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKM----GYEPNVITLTTLIKGLCLKGQIHQALQF 164

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + +   G   +  SYGT+INGL K G    AL +   +  + V+ NVV YN +ID   K
Sbjct: 165 HDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 224

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A +++  +V    + P+VVTYN +I+G C  G+  +  +++++M       + +
Sbjct: 225 VKLVNEAFDLYSEMV-SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY 283

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   + G CK   ++ A+ V   M++ GI  D  TYN+++D +C   ++ +   ++  +
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            ++G   N+ SY+I+I G  +  KVDEA+++++ +   N   D  T+  LI+GLCK    
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK---- 399

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          G+++ A  LV+ M   G   +  T NS+++   +  +++ AI L 
Sbjct: 400 --------------LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +M  +G  P + +Y TL++GLCK  R  +A    +++L KG+  D+  Y+ +I G C  
Sbjct: 446 TKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSH 505

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
              D +L L  +  + G  P+   Y I+I  L    + + A +L   M  R
Sbjct: 506 GLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 212/417 (50%), Gaps = 27/417 (6%)

Query: 229 WDRMKKNEREKDS-FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++R+   +  K S F +   +  L K+ +      ++R+M  +GI  D V  + +I+ F 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G+    F +   + + G   NV++   LI+GL   G++ +A+   + +     + +  
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA---------------------DAASL 385
           ++G LINGLCK G  + A+Q+L  V+    G+L                      +A  L
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVD----GKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 234

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            + M   G   +  T N+L++GF    K+++A  LF +M  +  +P V ++N L++G CK
Sbjct: 235 YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA + +  M+++G KPD+ TY+ L++  C  K+++ A  +     Q+G  P++  
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y+I+IHG C   KV++A+ L+  M   N +P++VTYN+L+DGL K G    AL++ + + 
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 414

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  +  D I+YN  L  LC   ++  A   L      GI P   T+  LV  +  NG
Sbjct: 415 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 208/412 (50%), Gaps = 21/412 (5%)

Query: 90  DKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           DK + +   +N++ +G     LC+  Q   A + L  +  K ++P+V  Y T+I+ + K 
Sbjct: 166 DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 225

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
             +  A  ++ EM  +G+  +VV YN LI GF   G    A +++ +++ E ++ PNV T
Sbjct: 226 KLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE-NINPNVYT 284

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           +N++++G CK  R  E   +   M K   + D FTY S +   C    V  A+ ++  + 
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           + G+  +  +Y+ MI GFC+  K+ E   L++ M     + +VV+YN LI GL + GK+ 
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
            A+ + + + ++    D  T+  +++ LCKN  ++KAI                  +L+ 
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI------------------ALLT 446

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +M   G + +  T  +L++G  +  +LE+A  +F+++  KG    V  Y  +I G C   
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
            F E+   + +M E G  P+ +TY ++I  L    + D A KL  + + +G 
Sbjct: 507 LFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 131/250 (52%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++ ++  E  + +    +S    + +   K + +    ++   ++++     + L ++M 
Sbjct: 40  RLYSQFHENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQME 99

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G +  +V  + LIN   ++ +   ++S + ++L+ G++P++IT + LI GLC   +I 
Sbjct: 100 FNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIH 159

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL+   + +  GF  +   Y  LI+GLC  G+   ALQL   +  +   PN+V YNT++
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 219

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D + K    ++A ++++ ++ + + PD+++YN  + G C   +M DA +  N  +   I 
Sbjct: 220 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN 279

Query: 606 PTTITWHILV 615
           P   T++ILV
Sbjct: 280 PNVYTFNILV 289



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q +KA   L  + ++G++PD+ +Y T+++GL K+G L  A  VF+++  +G   +
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y  +I GF   G +  + ++  ++  E    PN VTY ++I     C  FD      
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKM-EENGCIPNAVTYEIII-----CSLFD------ 539

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
               K+E +K                    AE++ REM+  G+F
Sbjct: 540 ----KDENDK--------------------AEKLLREMITRGLF 559



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/130 (17%), Positives = 55/130 (42%)

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           QK   P +  +  ++  L  +      + L+  M+      +LV  + L++   + G   
Sbjct: 65  QKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNP 124

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +  +   IL+    P++I+    +KGLC   ++  A +F +  +  G     +++  L+
Sbjct: 125 LSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLI 184

Query: 616 RAVMNNGAST 625
             +   G ++
Sbjct: 185 NGLCKVGQTS 194


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 166/584 (28%), Positives = 287/584 (49%), Gaps = 40/584 (6%)

Query: 52  KLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI------FGC 105
           KL++H +R  +L E  K     ++  + I AY +   P  A  +F +M  +        C
Sbjct: 126 KLILHPTR--DLPEPSK-----ELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTC 178

Query: 106 EAGI--LCRKRQFEK---AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
              +  L R         A++ L    + G+ P+  S+  +I G      +  AL   ++
Sbjct: 179 NTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNK 238

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKC 219
           M E G   + V YN ++D   K+     A+++   L M++  + PN  TYN+++ G C+ 
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLL--LDMKSKGLSPNKHTYNMLVCGYCRL 296

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G   E  ++ + M +N      +TY   ++G C  G ++ A R+  EM +  +  D VTY
Sbjct: 297 GLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTY 356

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N +IDG  +     E + L E M +KG   N V+YNI+++ + + G + EA +  + + E
Sbjct: 357 NTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEE 416

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
              + D  T+  LI   CK G + KA ++++E                  M   G K++ 
Sbjct: 417 NGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE------------------MTSKGLKIDT 458

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +T N++++      KL+ A  L    S++G     VSY  LI G  K E+   A +   E
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M E+   P  ITY+ +I GLCQS+K+D A+    + L+ G  PD T YNI+IHG C  G 
Sbjct: 519 MKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGN 578

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE A Q ++ M +    P++ T N L+ GL + G  +KAL+++N ++ +    D+++YN 
Sbjct: 579 VEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNT 638

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +  LC   +  +A++ L +   + + P   T+ +++ A+ + G
Sbjct: 639 IISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAG 682



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 166/645 (25%), Positives = 290/645 (44%), Gaps = 59/645 (9%)

Query: 18  PHTALALFDSATR---EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           PH A  +F+   R    P       L + ++R      +++  +R +    I+    P  
Sbjct: 156 PHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL--ARQVLKDSIKLGVVPNT 213

Query: 75  VALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLN 124
            + ++ I  Y   S    ALD   +M+E FGC             L ++R  ++A+  L 
Sbjct: 214 NSFNILIYGYCLESKVKDALDWVNKMSE-FGCVPDTVSYNTILDALLKRRLLQEARDLLL 272

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +  KGL P+ ++Y  ++ G  + G L  A  V + M    +   V  YN+L++GF   G
Sbjct: 273 DMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A  I + +  + +V P+VVTYN +I+G  +     E   + + M K   + ++ TY
Sbjct: 333 KIDEAFRIRDEM-EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTY 391

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              +  +CK GN+  A     +M E+G+  D VTYN +I  +C+AGK+ + F + + M  
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           KG  ++  + N ++  L    K+DEA ++     ++    D  ++G+LI G  K+   ++
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A+ + +E++E                       +  T NS++ G  Q+ K++ AI    E
Sbjct: 512 ALNLWDEMKE------------------RQIMPSTITYNSVIGGLCQSRKVDQAIDKLNE 553

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G  P   +YN +I+G C      +A+ F  EM+E  +KPD+ T ++L+ GLC+   
Sbjct: 554 MLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGM 613

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ++ ALKL    + KG   DV  YN +I  LC  GK E+A  L + M+ +   P+  TY  
Sbjct: 614 LEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKV 673

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPD-----------------------IISYNITL 580
           ++  L   G   +A E    ++E  +  D                        I+Y+  +
Sbjct: 674 IIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQI 733

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             LC+  +  DA     +    G+     T+  L+  ++    ST
Sbjct: 734 NELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKST 778



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 3/223 (1%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+  FI + +      L    +R    P+    +T I    ++++   A     +M   
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 463 GWKPDMITYSLLINGLCQ---SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            ++P+++T + L+N L +   S  I +A ++    ++ G  P+   +NILI+G C   KV
Sbjct: 170 NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKV 229

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           +DAL   + M +  CVP+ V+YNT++D L K     +A ++   +  + L P+  +YN+ 
Sbjct: 230 KDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNML 289

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + G C    + +A + +       +LPT  T+++LV    N+G
Sbjct: 290 VCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/533 (30%), Positives = 264/533 (49%), Gaps = 21/533 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    E A      +  +G+  DV  Y +++ GL ++G++  A  + D M   GVE NV
Sbjct: 185 CKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNV 244

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y + I  + ++     A  ++E +V +  V P+VVT + ++ GLCK GRF E   ++ 
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEMVRK-GVLPDVVTLSALVGGLCKDGRFSEAYALFR 303

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+K     +  TYC  I  L KA     +  +  E+V  G+ +D + Y A++D  C+ G
Sbjct: 304 EMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEG 363

Query: 291 KIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           KI E  +++   +      N V+Y +LI  L + G VD A  +   + EK+ + +  T  
Sbjct: 364 KIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFS 423

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            +INGL K G++ KA   + E++E G        G + D          A  + + M   
Sbjct: 424 SIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCE 483

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G ++N +  +SL+NG  +  K+E A  LF+EM+ +G     V+Y TLI+GL K      A
Sbjct: 484 GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAA 543

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           +   +E+ EK   PD + Y++ IN LC   K   A     +    G  PD   YN +I  
Sbjct: 544 FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA 603

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
               GK   AL+L + MK+ +  PNL+TY+TL+ GLF+ G  +KA  + N +      P 
Sbjct: 604 QSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT-WHILVRAVMNNGAS 624
            +++   L+  CS  R SD    +++ +    L   IT ++ LVR +  NG +
Sbjct: 664 SLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMT 715



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/548 (29%), Positives = 261/548 (47%), Gaps = 67/548 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + ++AK            P+  +Y  +I+ L K+G++ GA  V  EM E+ +  N
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418

Query: 170 VVCYNILIDGFFKKG------DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           VV ++ +I+G  K+G      DYMR  E+ ER      + PNVVTY  +I+G  KC   +
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMR--EMKER-----GIDPNVVTYGTVIDGSFKCLGQE 471

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             L+++  M     E + F   S ++GL K G +E AE ++REM E G+ +D V Y  +I
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG  + G +   F++ + +  K  L + V YN+ I  L   GK  EA S  E ++     
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T+  +I    +                  EG+ A A  L+N M +   K N  T +
Sbjct: 592 PDQVTYNTMIAAQSR------------------EGKTAKALKLLNGMKRSSIKPNLITYS 633

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPT------------------------------ 432
           +L+ G  +A  +E A +L  EMS  G SPT                              
Sbjct: 634 TLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNA 693

Query: 433 -----VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
                +  YNTL+  LC      +A   ++EM  +G  PD IT++ LI G  +S  +D A
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
                Q L  G +P+V  +N L+ GL SAG++ ++  + + MKKR   P+ +TY+ L+ G
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K  +  +A+ ++  ++ +   P + +YN  +        MS A E  N+   RG+LPT
Sbjct: 814 YGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPT 873

Query: 608 TITWHILV 615
           + T+ ILV
Sbjct: 874 SCTYDILV 881



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 258/560 (46%), Gaps = 58/560 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+   + A      +  KG+ PDV +   ++ GL K G    A A+F EM + G   N 
Sbjct: 255 CRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNH 314

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           V Y +LID   K     R  E    L  V+   V  +++ Y  +++ LCK G+ DE  +M
Sbjct: 315 VTYCMLIDTLAKA---QRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDM 371

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +     +    +  TY   I  LCKAGNV+GAE+V  EM E  I  + VT++++I+G  +
Sbjct: 372 FRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVK 431

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNI-------------------------------- 315
            G + +  +    M  +G   NVV+Y                                  
Sbjct: 432 RGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFI 491

Query: 316 ---LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
              L+ GL +NGK+++A +++  + E+    D   +  LI+GL K G L  A ++  E+ 
Sbjct: 492 VDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELT 551

Query: 373 EGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           E                    G+  +A S +  M   G K +  T N+++    +  K  
Sbjct: 552 EKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTA 611

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L   M R    P +++Y+TLI GL +     +A   + EM   G+ P  +T+  ++
Sbjct: 612 KALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVL 671

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
               Q ++ D+ L++    +  G   D+T+YN L+  LC  G    A+ +   M  R   
Sbjct: 672 QACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIA 731

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+ +T+N L+ G FK+G  D A   ++ +L   + P++ ++N  L GL S  R+ ++   
Sbjct: 732 PDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMV 791

Query: 596 LNDALCRGILPTTITWHILV 615
           LN+   RGI P+ +T+ ILV
Sbjct: 792 LNEMKKRGIEPSNLTYDILV 811



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 257/511 (50%), Gaps = 20/511 (3%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D  SY  V++G  + G L    A+  EM +RGV  + V  N ++ G  + G   RA  + 
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 194 ERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           E +V    +   +VV +N +++G CK G  +    + +RMK      D   Y S + GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           +AG V+ A  +   M   G+  + VTY   I  +CR   + + F L+E M RKG L +VV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           + + L+ GL ++G+  EA +++  + +     +  T+ +LI+ L K    N+++ +L EV
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
              G                 EG++ +A  +           N  T   L++   +A  +
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +  EM  K  SP VV+++++INGL K    G+A  +++EM E+G  P+++TY  +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G  +    + AL +  + L +G   +  + + L++GL   GK+E A  L+  M +R  
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           + + V Y TL+DGLFKTG+   A ++   + E+ L PD + YN+ +  LC   +  +A  
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNGAST 625
           FL +    G+ P  +T++ ++ A    G + 
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTA 611



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 259/569 (45%), Gaps = 92/569 (16%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV--ETNVVCYNILIDG 179
            L  + ++G+  D  +  TV+ GL + G +  A A+ + M   G     +VV +N L+DG
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDG 183

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + K GD   A  + ER+  +  V  +VV YN ++ GLC+ G  D   +M D MK++  E 
Sbjct: 184 YCKVGDMETAFAVAERMKAQ-GVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEP 242

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY  FI   C+   V+ A  +Y EMV  G+  D VT +A++ G C+ G+  E + L+
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302

Query: 300 ------------------------------------EVMGRKGCLNVVSYNILIRGLLEN 323
                                               EV+ R   ++++ Y  L+  L + 
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GK+DEA  ++      N   +  T+ VLI+ LCK G ++ A Q+L+E+EE          
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE---------- 412

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT----- 438
                        N  T +S++NG ++   +  A    +EM  +G  P VV+Y T     
Sbjct: 413 --------KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGS 464

Query: 439 ------------------------------LINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                                         L+NGL K  +  +A +  +EM E+G   D 
Sbjct: 465 FKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDH 524

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y+ LI+GL ++  +  A K+  +  +K   PD  +YN+ I+ LC  GK ++A      
Sbjct: 525 VNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEE 584

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+     P+ VTYNT++    + G   KAL++ N +    ++P++I+Y+  + GL     
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA 644

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRA 617
           +  A   LN+    G  PT++T   +++A
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 242/516 (46%), Gaps = 56/516 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    + A++ L+ + EK + P+V ++ ++INGLVK G +  A     EM ERG++ N
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  +IDG FK      A +++  ++ E  V  N    + ++NGL K G+ ++   ++
Sbjct: 454 VVTYGTVIDGSFKCLGQEAALDVYHEMLCE-GVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D   Y + I GL K GN+  A +V +E+ E  +  DAV YN  I+  C  
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE     E M   G   + V+YN +I      GK  +A+ +   ++  +   +  T+
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLAD----------- 381
             LI GL + G + KA  +LNE+   G                +GR +D           
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 382 -------------------------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                                    A  ++  M   G   +  T N+L+ G  ++  L+N
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A   + +M   G SP V ++NTL+ GL    R GE+   + EM ++G +P  +TY +L+ 
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVT 812

Query: 477 GLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           G   QS K++ A++L C+ + KGF P V+ YN LI      G +  A +L++ M+ R  +
Sbjct: 813 GYGKQSNKVE-AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVL 871

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           P   TY+ L+ G  K  +  +  +    + E+   P
Sbjct: 872 PTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 214/430 (49%), Gaps = 24/430 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRF-DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           ++ +S   + V+YNV+++G  + G    E L     M K     D+ T  + + GLC+ G
Sbjct: 94  LLRSSESVDTVSYNVVMSGFSEQGGLAPEAL--LAEMCKRGVPFDAVTVNTVLVGLCRDG 151

Query: 256 NVEGAERVYREMVESGIF--VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            V+ A  +   MV  G    +D V +N+++DG+C+ G ++  F + E M  +G  ++VV 
Sbjct: 152 RVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVG 211

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN L+ GL   G+VD A  + + ++      +  T+ + I   C+   ++          
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVD---------- 261

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                   DA SL   M + G   +  T ++L+ G  +  +   A  LF+EM + G +P 
Sbjct: 262 --------DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPN 313

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y  LI+ L K +R  E+ S + E++ +G   D+I Y+ L++ LC+  KID A  +  
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
             L    TP+   Y +LI  LC AG V+ A Q+ S M++++  PN+VT++++++GL K G
Sbjct: 374 HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRG 433

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              KA +    + E  + P++++Y   + G   C     A +  ++ LC G+        
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD 493

Query: 613 ILVRAVMNNG 622
            LV  +  NG
Sbjct: 494 SLVNGLKKNG 503



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 207/440 (47%), Gaps = 19/440 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + EKA+     + E+G+  D  +Y T+I+GL K+G+L  A  V  E+ E+ +  +
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+ I+     G    A+   E +   T + P+ VTYN MI    + G+  + L++ 
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEM-QSTGLKPDQVTYNTMIAAQSREGKTAKALKLL 617

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK++  + +  TY + I GL +AG VE A+ +  EM  SG    ++T+  ++    + 
Sbjct: 618 NGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQG 677

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +     E+ E M   G C ++  YN L+R L  NG   +A+ + E +  +    D+ T 
Sbjct: 678 RRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G  K+G+L+ A    +++   G                  GR+ ++  ++N M K
Sbjct: 738 NALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK 797

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  T + L+ G+ + S    A+ L+ EM  KG  P V +YN LI+   KV    +
Sbjct: 798 RGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQ 857

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM  +G  P   TY +L++G  + +      K      +KGF+P     + +  
Sbjct: 858 AKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISR 917

Query: 512 GLCSAGKVEDALQLYSNMKK 531
                G   +A +L  N+ K
Sbjct: 918 AFSKPGMSWEARRLLKNLYK 937


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 263/536 (49%), Gaps = 23/536 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLL--GALAVFDEMFERGVE 167
            R R    A + L+SL  + G++P + +   V++ L +S   L   +L VF  + E  + 
Sbjct: 146 ARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLH 205

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   +N+L+     KG    A      +     + P+ VTYN ++N  C+ G   E   
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTM-QGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  RMK++       TY + +    + G ++ A +V   M   G   D  TYN +  G C
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLC 324

Query: 288 RAGKIKECFELWEVMGR--KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           +AGK+ E F L + M R      +VV+YN L+    +     +A+ + E +R+K      
Sbjct: 325 QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            TH +++  LCK G L +A+  L ++ E G                  G +A A +L++ 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G K++ +T N+++    +  + E+A  L     ++G  P  VSY T++    K   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A     +M+E+   P + TY+ LI GLC+ +++  A+    + ++KG  PD T YNI
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +IH  C  G +E+A + ++ M + +  P++VT NTLM+GL   G  DKAL+++   +E+ 
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + D+I+YN  ++ +C    +  A  F +D   +G+ P   T+++++ A+   G S
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 263/554 (47%), Gaps = 34/554 (6%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR-----------F 122
           D ALS   AY +  +P  A  +   +    G    +           R            
Sbjct: 139 DAALS---AYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDV 195

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             SL E  L P+ Y++  +++     G L  ALA    M   G+  + V YN L++   +
Sbjct: 196 FRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           KG    A+ +  R+  +  + P   TYN +++   + G   +  ++ + M     E D  
Sbjct: 256 KGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           TY     GLC+AG V+ A R+  EM   S    D VTYN ++D   +     +   L E 
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KG    +V++NI+++ L + GK++EA+   E + E+    D  T+  LI+  CK G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           + KA  +++E+   G                   R  DA  L++   + G   +  +  +
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +M  + +    E A+ L+ +M  +   P++ +YNTLI GLC++ER  EA   + E++EKG
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD  TY+++I+  C+   ++ A +   + ++  F PDV   N L++GLC  GK++ AL
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+ +  ++    +++TYNTL+  + K GD D AL  ++ +  + L+PD  +YN+ L  L
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674

Query: 584 CSCSRMSDAFEFLN 597
               R  +A   L+
Sbjct: 675 SEAGRSEEAHNMLH 688



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 250/600 (41%), Gaps = 134/600 (22%)

Query: 84  GKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
             +++P  +LDVF+ + E+        F       C K     A   L+++   GL PD 
Sbjct: 184 SPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDA 243

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T++N   + G L  A A+   M   G+      YN L+  F + G   +A ++ E 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVES 303

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTY---------- 244
           +       P++ TYNV+  GLC+ G+ DE   + D M++ +    D  TY          
Sbjct: 304 MTA-YGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKW 362

Query: 245 -CS------------------------FIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            CS                         +  LCK G +E A     ++ E G+  D +TY
Sbjct: 363 RCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITY 422

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG------CLNVVSYNI-----------LIRGLLE 322
           N +ID +C+AG + + F L + M  KG       LN V YN+           L+    +
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ 482

Query: 323 NGKVDEAIS-------------------IWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G V + +S                   +W+ + E+      +T+  LI GLC+   L +
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           AI  LNE+ E G                 EG L +A    N+M ++  K +  TCN+LMN
Sbjct: 543 AIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G     KL+ A+ LF+    KG    V++YNTLI  +CKV     A  F  +M  KG +P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 467 DMITYSLLINGLCQSKKID--------------MALKLCCQFLQKGFTPDVTM------- 505
           D  TY+++++ L ++ + +              ++    C  L+     +  +       
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKP 722

Query: 506 ---------------YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                          Y   ++GLC+ G++++A  +   M ++    +  TY TLM+GL K
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 195/410 (47%), Gaps = 54/410 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF------- 162
           LC++ + E+A   L  + E+GL PDV +Y T+I+   K+G++  A  + DEM        
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 163 ----------------------------ERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                                       +RG   + V Y  ++  +FK+ +   A  +W+
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           +++ E  + P++ TYN +I GLC+  R  E ++  + + +     D  TY   IH  CK 
Sbjct: 514 QMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G++E A R + +MVE+    D VT N +++G C  GK+ +  +L+E    KG  ++V++Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI+ + + G VD A+  ++ +  K    D+ T+ V+++ L + G   +A  +L+++ +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G+   + A  L+         +  +       G  +A           E S K     +
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEH------EGKPEA-----------ESSEKAQDNAL 735

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            +Y   +NGLC   +  EA + + EM++KG   D  TY  L+ GL + +K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 144/302 (47%), Gaps = 12/302 (3%)

Query: 67  QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
           Q+ + P++V+  +V+ AY K   P+ AL ++ +M E         +      LCR  + +
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   LN L EKGL PD  +Y  +I+   K GDL  A    ++M E   + +VV  N L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           +G    G   +A +++E  V E     +V+TYN +I  +CK G  D  L  +D M+    
Sbjct: 602 NGLCLHGKLDKALKLFESWV-EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D+FTY   +  L +AG  E A  +  ++ +SG    +     +         +KE   
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 298 LWEVMGRKGCLN--VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
             E    +   +  + +Y   + GL   G++ EA ++ + + +K    DS+T+  L+ GL
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780

Query: 356 CK 357
            K
Sbjct: 781 IK 782


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 277/563 (49%), Gaps = 31/563 (5%)

Query: 90  DKALD-VFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKG---LKPDVYS 137
           D A+D VF+RM E      +F   A I  LC +++ ++A   L  +   G     P+V S
Sbjct: 146 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVS 205

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y T+I+G  K G++  A  +FDEM  +G   +VV Y+ LIDG  K     +A+ I + + 
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM- 264

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V PN  TYN+MI G C  G+ +E + +  +M  +  + D  TY   I   CK G  
Sbjct: 265 FDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A  V+  MV  G   ++  Y+ ++ G+   G + +  +L ++M R G      ++NIL
Sbjct: 325 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 384

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGG 375
           I    ++G VD+A++ +  +R+     D  ++  +I+ LCK G +  A+   N+ V EG 
Sbjct: 385 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 376 EGRLADAASLVN----------------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
              +    SL++                 M   G   +A   N++M+   +  ++  A  
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 504

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F  +   G  P VVSYNTLI+G C V +  E+      M+  G +PD  TY+ L+NG  
Sbjct: 505 FFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ +++ AL L  +  +K         NI++HGL  AG++  A +LY  M  R     + 
Sbjct: 565 KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIE 624

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNT++ GL +    D+AL ++  +  +    D+ ++NI +  L    R+ +A    +  
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           + RG +P  IT+ +++++ +  G
Sbjct: 685 VLRGPVPHVITYSLMIKSRIEEG 707



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 272/615 (44%), Gaps = 91/615 (14%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V S   L+  L  EK    AL L    T + GY  SP+              VV  S I+
Sbjct: 165 VFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPN--------------VVSYSTII 210

Query: 62  ELI----EIQKCYC----------PEDVAL--SVIQAYGKNSMPDKALDVFQRM------ 99
           +      E+ K Y           P DV    S+I    K    +KA  + Q M      
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 100 --NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV 157
                +       C   Q E+A R L  +   GL+PDV +Y  +I    K G    A +V
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM------------------- 198
           FD M  +G + N   Y+IL+ G+  KG  +  +++ + ++                    
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 199 ---------------ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                          +  + P+VV+Y+ +I+ LCK GR ++ +  +++M       +  +
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           + S IHGLC  G  +  E +  EM+  GI  DA+  N ++D  C+ G++ E  + ++++ 
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             G   NVVSYN LI G    GK+DE+I  ++ +       DS T+  L+NG  KNG   
Sbjct: 511 HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNG--- 567

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                          R+ DA +L   M +   K  A T N +++G  QA ++  A  L+ 
Sbjct: 568 ---------------RVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           +M  +G    + +YNT++ GLC+     EA    +++  K ++ D+ T++++IN L +  
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           +ID A  L    + +G  P V  Y+++I      G +E++  L+ +M+K  C  +    N
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLN 732

Query: 543 TLMDGLFKTGDCDKA 557
            ++  L + GD  +A
Sbjct: 733 VIIRRLLEKGDVRRA 747



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 230/473 (48%), Gaps = 31/473 (6%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           A ++FDS  R+ G   +  ++H +L        ++ V  +L+L+ I+     E  A ++ 
Sbjct: 327 ARSVFDSMVRK-GQKPNSTIYHILLHGYATKGALIDVRDLLDLM-IRDGIPFEHRAFNIL 384

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I AY K+   DKA+  F  M +         +     ILC+  + E A    N +  +GL
Sbjct: 385 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            P++ S+ ++I+GL   G+      +  EM  RG+  + +  N ++D   K+G  + A++
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 504

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
            ++ +V+   V PNVV+YN +I+G C  G+ DE ++ +DRM       DS+TY + ++G 
Sbjct: 505 FFD-MVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGY 563

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
            K G VE A  +YREM    +   A+T N ++ G  +AG+I    EL+  M  +G  L +
Sbjct: 564 FKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRI 623

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN ++ GL EN  VDEA+ ++E LR K    D  T  ++IN L K G +++A  + + 
Sbjct: 624 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSA 683

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           +   G                 EG L ++  L   M+K+GC  +++  N ++   ++   
Sbjct: 684 MVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGD 743

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           +  A     ++  K  S    S   L+  +   +++ +   F+ E      +P
Sbjct: 744 VRRAGTYLTKIDEKNFS-VEASTAALLIPIVSEKKYQKEVKFLPEKYHSFMQP 795



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 166/335 (49%), Gaps = 28/335 (8%)

Query: 298 LWEVMGRKGCLNVVSYN-----ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           L+  M R G +N+++ N     ILIR     G++D A + + L  +      + T   LI
Sbjct: 78  LFNTMARSG-VNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLI 136

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV-NRMDKHGCKLNAYTCNSLMNGFIQA 411
            GLC                     R  DA  +V  RM + G   + ++ N+L+ G    
Sbjct: 137 KGLCDGK------------------RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVE 178

Query: 412 SKLENAIFLFKEMSRKG---CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            K + A+ L   M+  G   CSP VVSY+T+I+G  K     +AY    EM+ +G+ PD+
Sbjct: 179 KKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDV 238

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TYS LI+GLC+++ ++ A  +      KG  P+   YNI+I G CS G++E+A++L   
Sbjct: 239 VTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK 298

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P++VTY  L+    K G C +A  +++ ++ +  +P+   Y+I L G  +   
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + D  + L+  +  GI      ++IL+ A   +GA
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 393


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 173/562 (30%), Positives = 256/562 (45%), Gaps = 62/562 (11%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR      A    + +  +GL  DV  Y T++ G  ++G +  A  V D M E GV+ NV
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y   I  + +      A +++E +V    V  +VVT + ++ GLC+ GRF E   ++ 
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K     +  TYC+ I  L KAG  +    +  EMV  G+ +D VTY A++D   + G
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 291 KIKEC-----FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           K  E      F L + +   G    V+Y +LI  L +   VDEA  +   + EK+ + + 
Sbjct: 359 KTDEVKDTLRFALSDNLSPNG----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNR 388
            T   +ING  K G L+KA +    ++E G        G L D          A  + + 
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G K+N +  +SL+NG  Q  K+E A+ LFK+ S  G S   V+Y TLI+GL K   
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A+ F +E++++   PD + Y++ IN LC   K   A     +    G  PD + YN 
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I   C  G+   AL+L   MK  +  PNL+TYNTL+ GLF TG  +KA  + N ++   
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 569 LRP-----------------------------------DIISYNITLKGLCSCSRMSDAF 593
             P                                   DI  YN  L+ LC       A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 594 EFLNDALCRGILPTTITWHILV 615
             L + L  GI P TIT++ L+
Sbjct: 715 VVLEEMLGSGIAPDTITFNALI 736



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + ++ K  L       L P+  +Y  +I+ L K+ ++  A  V  EM E+ +  N
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ +I+GF K+G   +A E ++R++ E  + PNVVTY  +I+G  K    D  LE++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + + F   S ++GL + G +E A  ++++   SG+ +D V Y  +IDG  +A
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F+   E+M R    + V YN+ I  L   GK  EA S    +R      D +T+
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             +I   C+ G   KA+++L+E++                   G G +  A  L+N M  
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   ++ T   ++    Q+ +L+  + + + M   G    +  YNTL+  LC      +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++EML  G  PD IT++ LI G C+S  +D A     Q L +  +P++  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL S G++ +A  +   M+K    PN +TY+ L  G  K  +  +A+ ++  ++ +   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + +YN  +        M+ A E   D   RG+ PT+ T+ ILV
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 248/523 (47%), Gaps = 19/523 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F +A      + + G  P+  +Y T+I+ L K+G     L++  EM  RGV  +
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  L+D   K+G     K+   R  +  ++ PN VTY V+I+ LCK    DE  ++ 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTL-RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     +  T+ S I+G  K G ++ A    R M E GI  + VTY  +IDGF + 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
                  E++  M  +G  +N    + L+ GL +NGK++EA+++++       + D   +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GL K G +  A +   E+ +                    G+  +A S +  M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +  T N+++    +  +   A+ L  EM      P +++YNTL+ GL       +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + EM+  G+ P  +T+  ++    QS+++D+ L +    +  G   D+T+YN L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G    A  +   M      P+ +T+N L+ G  K+   D A   +  +L + + P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           +I ++N  L GL S  R+ +A   L +    G+ P  +T+ IL
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 260/547 (47%), Gaps = 62/547 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR  Q + A     +L ++G      DV  + T+I G  + GD   AL+V D M  +G+
Sbjct: 145 LCRNGQVDAAA----ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV YN L+ GF + G    A+ + + ++ E  V PNV TY   I   C+    +E  
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLD-MMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++++ M +N    D  T  + + GLC+ G    A  ++REM + G   + VTY  +ID  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 287 CRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            +AG+ KE   L  E++ R   +++V+Y  L+  L + GK DE           N + + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ VLI+ LCK   +++A Q+L E+EE                       N  T +S++
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEE------------------KSISPNVVTFSSVI 421

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING-----------------LC---K 445
           NGF++   L+ A    + M  +G +P VV+Y TLI+G                 LC   K
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 446 VERF---------------GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           V +F                EA +  K+    G   D + Y+ LI+GL ++  +  A K 
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + + +   PD  +YN+ I+ LC  GK ++A    + M+     P+  TYNT++    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G+  KAL++ + +    ++P++I+YN  + GL     +  A   LN+ +  G  P+++T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 611 WHILVRA 617
              +++A
Sbjct: 662 HRRVLQA 668



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 232/494 (46%), Gaps = 56/494 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A++ L  + EK + P+V ++ +VING VK G L  A      M ERG+  N
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LIDGFFK      A E++  ++ E  V  N    + ++NGL + G+ +E + ++
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
                +    D   Y + I GL KAG++  A +  +E+++  +  DAV YN  I+  C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE       M   G   +  +YN +I      G+  +A+ +   ++  +   +  T+
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLADAASLVNRMD----------- 390
             L+ GL   G + KA  +LNE+   G         R+  A S   R+D           
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 391 ----------------------------------KHGCKLNAYTCNSLMNGFIQASKLEN 416
                                               G   +  T N+L+ G  ++S L+N
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A   + +M  +  SP + ++NTL+ GL  V R GEA + + EM + G +P+ +TY +L  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 477 GLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           G   QS K++ A++L C+ + KGF P V+ YN LI     AG +  A +L+ +M+KR   
Sbjct: 808 GHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVH 866

Query: 536 PNLVTYNTLMDGLF 549
           P   TY+ L+ G +
Sbjct: 867 PTSCTYDILVSGWY 880



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 19/381 (4%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRG 319
           A  V  EM + G+  D VT N ++ G CR G++     L +  G    L+V+ +N LI G
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
               G    A+S+ + +  +    D   +  L+ G C+ G ++ A  +L+ ++E G    
Sbjct: 179 YCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                           + +A  L   M ++G  L+  T ++L+ G  +  +   A  LF+
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM + G +P  V+Y TLI+ L K  R  E  S + EM+ +G   D++TY+ L++ L +  
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 483 KIDMALKLCCQF-LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           K D  +K   +F L    +P+   Y +LI  LC A  V++A Q+   M++++  PN+VT+
Sbjct: 359 KTD-EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           +++++G  K G  DKA E    + E  + P++++Y   + G         A E  +D LC
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 602 RGILPTTITWHILVRAVMNNG 622
            G+         LV  +  NG
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNG 498



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 34/273 (12%)

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL------------------- 420
           A A +++  M K G   +  T N+L+ G  +  +++ A  L                   
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176

Query: 421 ---------------FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
                             M+ +G    VV YNTL+ G C+  +   A   +  M E G  
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TY+  I   C++K ++ A  L    ++ G   DV   + L+ GLC  G+  +A  L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M K    PN VTY TL+D L K G   + L +   ++   +  D+++Y   +  L  
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +  +  + L  AL   + P  +T+ +L+ A+
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 262/504 (51%), Gaps = 20/504 (3%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L + +Q++ A      +   G+KPD  +   ++N   + G +  + +VF ++ 
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G   + V + ILI G   KG+  +A    +++V +     + V+Y  +INGLC+ G  
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQ-GFQLDQVSYGTLINGLCRVGET 179

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              +++  R+       +   Y + I  +CK   V  A  +Y EMV   I  D VTY+++
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC  GK+K   +L+  M       NV +++ILI G  + GKV EA ++  ++ +KN 
Sbjct: 240 ISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  L++G C    +NKA                   SL N M + G   + ++ 
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKA------------------KSLFNVMAQRGVTPDVWSY 341

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + ++NGF +   ++ A+ LF+EM  K   P VV+YN+L++GLCK  R   A   V EM +
Sbjct: 342 SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G   ++ITY+ +++ +C++  +D A+ L  +  +KG  PD+  Y +LI+GLC  G+++D
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A +++ ++  +   PN+ TY +L++G    G  D+ L + + + +    P+ I+Y I + 
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521

Query: 582 GLCSCSRMSDAFEFLNDALCRGIL 605
            L        A + L + + RG+L
Sbjct: 522 SLFEKDENDKAEKLLREMIARGLL 545



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 256/487 (52%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P    +G ++  L+K+     AL++  +M   G++ + +  N+L++ F + G    +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           + + +++   +P+ VT+ ++I GLC  G   + L   D++     + D  +Y + I+GLC
Sbjct: 116 FAK-ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           + G  + A ++ R +    +  + V Y+ +ID  C+   + + F+L+ E++ ++   +VV
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI G    GK+  A+ ++  +   N N +  T  +LI+G CK              
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCK-------------- 280

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A +++  M K   KL+  T NSLM+G+    ++  A  LF  M+++G +P
Sbjct: 281 ----EGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SY+ +ING CK++   EA    +EM  K   P+++TY+ L++GLC+S +   AL+L 
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   ++  YN ++  +C    V+ A+ L + +K++   P++ TY  L++GL K 
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  D A +++  +L +   P+I +Y   + G C+     +    L+     G +P  IT+
Sbjct: 457 GRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITY 516

Query: 612 HILVRAV 618
            IL+ ++
Sbjct: 517 EILIHSL 523



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 222/445 (49%), Gaps = 24/445 (5%)

Query: 184 GDYMRAKEIWERLVMETS-----VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  ++AK+    L +        + P+ +T N+++N   + G       ++ ++ K    
Sbjct: 66  GSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYH 125

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D+ T+   I GLC  G V  A   + ++V  G  +D V+Y  +I+G CR G+ K   +L
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185

Query: 299 WE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              V G+    NVV Y+ +I  + ++  V++A  ++  +  K  + D  T+  LI+G C 
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                              G+L  A  L NRM       N YT + L++GF +  K+  A
Sbjct: 246 ------------------VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +   M +K     VV+YN+L++G C V++  +A S    M ++G  PD+ +YS++ING
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+ K +D A+KL  +   K   P+V  YN L+ GLC +G+   AL+L   M  R    N
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++TYN+++D + K    DKA+ +   I E+ ++PDI +Y + + GLC   R+ DA +   
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           D L +G  P   T+  L+    N G
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKG 492



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 214/405 (52%), Gaps = 20/405 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LCR  + + A + L  +  K ++P+V  Y T+I+ + K   +  A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            ++ EM  + +  +VV Y+ LI GF   G    A +++ R++ + ++ PNV T++++I+G
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISD-NINPNVYTFSILIDG 277

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
            CK G+  E   +   M K   + D  TY S + G C    V  A+ ++  M + G+  D
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
             +Y+ MI+GFC+   + E  +L+E M  K    NVV+YN L+ GL ++G+   A+ + +
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            + ++   ++  T+  +++ +CKN +++KAI +L +++E                   G 
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE------------------KGI 439

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + + +T   L+NG  +  +L++A  +F+++  KG SP + +Y +LING C    F E  +
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
            + +M + G  P+ ITY +LI+ L +  + D A KL  + + +G 
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 178/351 (50%), Gaps = 19/351 (5%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
           A+ +  ++    +A + +    L + M   G   + ++ N+L+    + G +  + S++ 
Sbjct: 58  AIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFA 117

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            + +K  + D+ T  +LI GLC  G ++KA+   ++V                     G 
Sbjct: 118 KILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVA------------------QGF 159

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           +L+  +  +L+NG  +  + + A+ L + +  K   P VV Y+T+I+ +CK +   +A+ 
Sbjct: 160 QLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFD 219

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              EM+ K   PD++TYS LI+G C   K+  A+ L  + +     P+V  ++ILI G C
Sbjct: 220 LYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFC 279

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GKV +A  + + M K+N   ++VTYN+LMDG       +KA  ++N + +  + PD+ 
Sbjct: 280 KEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVW 339

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           SY+I + G C    + +A +   +  C+ I P  +T++ LV  +  +G ++
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P    +  ++  L  A + + AL L   M+     P+ +T N LM+   + G    +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  IL++   PD +++ I +KGLC    +  A  F +  + +G     +++  L+  +  
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 621 NGAS 624
            G +
Sbjct: 176 VGET 179


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/645 (26%), Positives = 300/645 (46%), Gaps = 55/645 (8%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPH----LFHHILRRLI------DPKLVVHVSR- 59
           LL   ++P  AL  F  A  + G+ H+      + H + R  +        K V+  SR 
Sbjct: 77  LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 136

Query: 60  --------ILELIEIQKCYCPE-----DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE 106
                   I +++   +  C       DV  SV    G   + ++A + F RM       
Sbjct: 137 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELG---LLEEANECFSRMRNFRTLP 193

Query: 107 AGILC--------RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
               C        +    +  ++F N +   G+ P V++Y  +I+ L K GDL  +  +F
Sbjct: 194 KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF 253

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
            +M E G+  +VV YN LIDG+ K G       ++  +  +    P+++TYN +IN  CK
Sbjct: 254 VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNGLINCYCK 312

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             +     E +  MK N  + +  TY + I   CK G ++GA ++  +M  +G+  +  T
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y ++ID  C+AG + E ++L   M + G  LN+V+Y  L+ GL + G++ EA  ++  + 
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +   + +   +  L++G  K                    R+ DA  ++ +M +   K +
Sbjct: 433 KDGISPNQQVYTALVHGYIK------------------AERMEDAMKILKQMTECNIKPD 474

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
                S++ G     KLE    + +EM  +G S   V   T+I+   K  +  +A +F +
Sbjct: 475 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 534

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM + G +  ++TY +LI+GLC++  +++A+   C+ L  G  P+V +Y  LI GLC   
Sbjct: 535 EMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNN 594

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            +E A +L+  M+ R   P++  +  L+DG  K G+  +AL + + + E  +  D+  Y 
Sbjct: 595 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYT 654

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + G   C  +  A +F N+ + +GILP  +    L+R     G
Sbjct: 655 SLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 699



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 233/473 (49%), Gaps = 19/473 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++   E ++R    + E GL PDV +Y ++I+G  K G L    ++F+EM + G   +
Sbjct: 240 LCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 299

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN LI+ + K     RA E +  +     + PNVVTY+ +I+  CK G     +++ 
Sbjct: 300 IITYNGLINCYCKFEKMPRAFEYFSEM-KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     + FTY S I   CKAGN+  A ++  +M+++G+ ++ VTY A++DG C+A
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 418

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  E++  M + G   N   Y  L+ G ++  ++++A+ I + + E N   D   +
Sbjct: 419 GRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILY 478

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G +I G C    L +   IL E++  G                  G+ +DA +    M  
Sbjct: 479 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 538

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G +    T   L++G  +A  +E A+  F  M   G  P V  Y +LI+GLC       
Sbjct: 539 VGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIES 598

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM  +G  PD+  ++ LI+G  +   +  AL L  +  +     D+ +Y  L+ 
Sbjct: 599 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 658

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           G    G++  A + ++ M ++  +P  V    L+   +K G  D+A+E+ N +
Sbjct: 659 GFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 183/419 (43%), Gaps = 54/419 (12%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI-HGLCKAGNVEGAERVYRE 266
            ++V+ +   + G  +E  E + RM+ N R       C+F+ H L K+GN +   + + +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMR-NFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 220

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M+ +GI                                    +V +YN++I  L + G +
Sbjct: 221 MIGAGI----------------------------------APSVFTYNVMIDYLCKEGDL 246

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           + +  ++  +RE   + D  T+  LI+G                   G  G L + ASL 
Sbjct: 247 ENSRRLFVQMREMGLSPDVVTYNSLIDGY------------------GKVGSLEEVASLF 288

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           N M   GC  +  T N L+N + +  K+  A   F EM   G  P VV+Y+TLI+  CK 
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
                A   + +M   G  P+  TY+ LI+  C++  +  A KL    LQ G   ++  Y
Sbjct: 349 GMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L+ GLC AG++ +A +++ +M K    PN   Y  L+ G  K    + A++I   + E
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             ++PD+I Y   + G CS  ++ +    L +   RGI    +    ++ A    G S+
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 2/262 (0%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +  + E A + L  + E  +KPD+  YG++I G      L     + +EM  RG+  N V
Sbjct: 452 KAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 511

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
               +ID +FK G    A   ++ +  +  V   +VTY V+I+GLC+ G  +  ++ + R
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEM-QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M     + +   Y S I GLC    +E A++++ EM   G+  D   + A+IDG  + G 
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++E   L   M       ++  Y  L+ G  + G++ +A   +  + EK    +      
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 690

Query: 351 LINGLCKNGYLNKAIQILNEVE 372
           L+    K G L++AI++ NE+E
Sbjct: 691 LLREYYKRGQLDEAIELKNEME 712



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 138/338 (40%), Gaps = 51/338 (15%)

Query: 5   AKRLLN-LLKA--EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A +LLN +L+A  + N  T  AL D   +      +  +F  +L+  I P   V+ + + 
Sbjct: 389 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 448

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
             I+ ++    ED    + Q    N  PD  L         +G      C +R+ E+ K 
Sbjct: 449 GYIKAERM---EDAMKILKQMTECNIKPDLIL---------YGSIIWGHCSQRKLEETKL 496

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  +  +G+  +     T+I+   K+G    AL  F EM + GVE  +V Y +LIDG  
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC------------------------ 217
           + G    A + + R+ +   + PNV  Y  +I+GLC                        
Sbjct: 557 EAGIVELAVDYFCRM-LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615

Query: 218 -----------KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
                      K G   E L +  RM +   E D   Y S + G  + G +  A + + E
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
           M+E GI  + V    ++  + + G++ E  EL   M R
Sbjct: 676 MIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 286/611 (46%), Gaps = 47/611 (7%)

Query: 7   RLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI 66
           R+LN ++    P  AL  F  A R+ G+  S   +  IL  L    L            +
Sbjct: 52  RVLNTVR--HRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGL------------M 97

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSL 126
           +  YC  +  +SV    G   +    L ++            I  +K   EK       +
Sbjct: 98  RSAYCVMEKVVSVKMENGVVDVLILDLLLW------------IYAKKSMLEKCLLVFYKM 145

Query: 127 WEKGLKPDVYSYGTVINGLV-KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
             KG+ PD+ +   V+  L  +   +  A  V++ M E G+   VV YN ++D F K+G 
Sbjct: 146 VSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGK 205

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A ++  ++  +    PN VTYNV++NGL   G  ++  E+   M +   E  ++TY 
Sbjct: 206 VQEALQLLLQM-QKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYD 264

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I G C+ G ++ A R+  EM+  G     VTYN ++ G C+ G++ +  +L +VM  K
Sbjct: 265 PLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK 324

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
             + ++VSYN LI G    G + EA  ++  LR +       T+  LI+GLC+ G L+ A
Sbjct: 325 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA 384

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           +++ +E                  M KHG   + +T   L+ GF +   L  A  LF EM
Sbjct: 385 MRLKDE------------------MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +G  P   +Y T I G  K+    +A+   +EML +G+ PD+ITY++ I+GL +   +
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             A +L  + L  G  PD   Y  +IH    AG +  A  ++  M  +   P++VTY  L
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +      G    A+  +  + E+ + P++I+YN  + GLC   +M  A++F  +   +GI
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606

Query: 605 LPTTITWHILV 615
            P   T+ IL+
Sbjct: 607 SPNKYTYTILI 617



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 196/388 (50%), Gaps = 18/388 (4%)

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           +  +++ A  VY  MVE GI    VTYN M+D FC+ GK++E  +L   M + GCL N V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN+L+ GL  +G++++A  + + +        + T+  LI G C+ G L++A ++  E+
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 372 EEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
              G                  GR++DA  L++ M       +  + N+L+ G+ +   +
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A  LF E+  +G  P+VV+YNTLI+GLC++     A     EM++ G  PD+ T+++L
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + G C+   + MA +L  + L +G  PD   Y   I G    G    A  +   M  R  
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P+L+TYN  +DGL K G+  +A E+   +L   L PD ++Y   +        +  A  
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 526

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
              + L +GI P+ +T+ +L+ +    G
Sbjct: 527 VFLEMLSKGIFPSVVTYTVLIHSYAVRG 554



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 212/450 (47%), Gaps = 31/450 (6%)

Query: 63  LIEIQKCYC-PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------C 111
           L+++QK  C P DV  +V +     +   ++A ++ Q M  + G E             C
Sbjct: 213 LLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL-GLEVSAYTYDPLIRGYC 271

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
            K Q ++A R    +  +G  P + +Y T++ GL K G +  A  + D M  + +  ++V
Sbjct: 272 EKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LI G+ + G+   A  ++  L     V P+VVTYN +I+GLC+ G  D  + + D 
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLV-PSVVTYNTLIDGLCRMGDLDVAMRLKDE 390

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M K+  + D FT+   + G CK GN+  A+ ++ EM+  G+  D   Y   I G  + G 
Sbjct: 391 MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGD 450

Query: 292 IKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
             + F + E M  +G   ++++YN+ I GL + G + EA  + + +       D  T+  
Sbjct: 451 PSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS 510

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           +I+     G+L KA  +  E+   G                  GRL  A      M + G
Sbjct: 511 IIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG 570

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N  T N+L+NG  +  K++ A   F EM  KG SP   +Y  LIN  C +  + EA 
Sbjct: 571 VHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEAL 630

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
              K+ML++  +PD  T+S L+  L +  K
Sbjct: 631 RLYKDMLDREIQPDSCTHSALLKHLNKDYK 660


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 261/517 (50%), Gaps = 22/517 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG--DLLGALAVFD 159
           +F    G L +K+ +         +    ++P+VY+   +IN L  S    +  A +   
Sbjct: 71  VFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALG 130

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +MF+ G++   V +  L++G   K   + A ++++  + +    P+++TY  +I GLCK 
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE-IGKMGFAPSLITYTTIIKGLCKI 189

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G     L++  +M++   + D   Y + I  LCK      A   + EMV+ GI  + VTY
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249

Query: 280 NAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           ++++ GFC  G++ E   L++ M GR    N V++ IL+ GL + G + EA  ++E++ E
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                D+ T+  L++G C                   + ++ +A  L + M   G   + 
Sbjct: 310 NGVEPDAYTYSALMDGYCL------------------QSQMDEAQKLFDIMVGKGFAPSV 351

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N L+NG  ++ +L  A  L  EM  +  +P  V+Y+TL+ G C+  R   A    KE
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  PD ITYS+L++GLC+   +D A +L     +    P + +YNILI G+C+ GK
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +E A +L+SN+  +   P++VTY  ++ GL K G  ++A E++  ++     P+  +YN+
Sbjct: 472 LEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ++G       S+A   + + + RG    + T+ +L+
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 251/492 (51%), Gaps = 20/492 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF-FKKGDYMRAKE 191
           P V  +  ++  LVK       +++  +M    +  NV    ILI+       D++    
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
                + +  + P  VT+  ++NGLC   +  + ++++D + K        TY + I GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           CK G+   A ++ ++M E G   D V YN +ID  C+  +  E    +  M  +G   NV
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+Y+ ++ G    G+++EA S+++ +  +N   ++ T  +L++GLCK             
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK------------- 293

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                EG + +A  +   M ++G + +AYT ++LM+G+   S+++ A  LF  M  KG +
Sbjct: 294 -----EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P+V  YN LING CK  R  EA + + EM ++   PD +TYS L+ G CQ+ +  +A KL
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  PD   Y+IL+ GLC  G +++A +L   M++    P++  YN L+ G+  
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  + A E+++++  + ++P +++Y + + GL      ++A E     +  G LP + T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528

Query: 611 WHILVRAVMNNG 622
           +++ ++  + NG
Sbjct: 529 YNVAIQGFLRNG 540



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 233/474 (49%), Gaps = 22/474 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A F+++        VV +N L+    KK  Y     + +++ + +++ PNV T  ++I
Sbjct: 53  AVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDL-SNIRPNVYTLTILI 111

Query: 214 NGLCKCGR--FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           N LC   R           +M K   +    T+ + ++GLC    +  A +++ E+ + G
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
                +TY  +I G C+ G      +L + M  KGC  +VV+YN +I  L ++ + +EA+
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
             +  + ++    +  T+  +++G C  G LN                  +A SL  +M 
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN------------------EATSLFKQMI 273

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                 N  T   L++G  +   +  A  +F+ M+  G  P   +Y+ L++G C   +  
Sbjct: 274 GRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA      M+ KG+ P +  Y++LING C+S++++ A  L  +   +  TPD   Y+ L+
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C AG+ + A +L+  M     +P+ +TY+ L+DGL K G  D+A  +   + E ++ 
Sbjct: 394 QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           P I  YNI ++G+C+  ++  A E  ++   +GI P+ +T+ +++  ++  G S
Sbjct: 454 PHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 40/213 (18%)

Query: 419 FLFKEMSRKGCSPTVVSYNTLING-LCK----VERFGEAYSFVKEMLEKGWKPDMITYSL 473
           F+ +  +    S T +S +++ NG  C     +    +A +   ++L     P ++ ++ 
Sbjct: 15  FIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNK 74

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL-YSNMKKR 532
           L+  L + K     + LC Q       P+V    ILI+ LC + +  D +   +S + K 
Sbjct: 75  LLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR--DHVHFAFSALGK- 131

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
                          +FK G                L+P  +++   L GLCS +++ DA
Sbjct: 132 ---------------MFKLG----------------LQPTHVTFGTLLNGLCSKAKIIDA 160

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            +  ++    G  P+ IT+  +++ +   G +T
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTT 193


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 254/509 (49%), Gaps = 37/509 (7%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F + + F NS+W   L          I+ L +SG    A  V   + + G        N
Sbjct: 260 KFAEHEVFPNSIWLTQL----------ISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN 309

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            L+    +  ++ R   +   +  E  + PNVVT+ ++IN LCK  R DE LE++++M  
Sbjct: 310 ALLTALGRAREFKRMNTLLAEM-KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368

Query: 235 NER-----EKDSFTYCSFIHGLCKAG-NVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            E      E D  TY + I GLCK G   EG   V R   +     + VTYN +IDG+C+
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A  I+   EL++ M + G   NVV+ N L+ G+ ++G+++ A+  +  ++ K    ++ T
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI   C    + KA+++ +E+ E G                  C  +A    +L++G
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAG------------------CSPDAIVYYTLISG 530

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             QA KL+ A F+  +M   G SP +VS+N LING C+  +  EAY  +KEM   G KPD
Sbjct: 531 LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPD 590

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +TY+ LI+   ++     A +L  + +++G  P V  Y  LIH  C  G +++A++++ 
Sbjct: 591 GVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFR 650

Query: 528 NMKKRNCVP-NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           +M   + VP N V YN L++ L +    D AL + + +  + ++P+  ++N   KGL   
Sbjct: 651 DMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
           + +S AFE ++        P  IT  IL 
Sbjct: 711 NWLSKAFELMDRMTEHACNPDYITMEILT 739



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 233/482 (48%), Gaps = 33/482 (6%)

Query: 90  DKALDVFQRMNEIFGCEAGILC--------RKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D+A DV   + ++ G      C        R R+F++    L  + E  ++P+V ++G +
Sbjct: 287 DRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGIL 346

Query: 142 INGLVKSGDLLGALAVFDEMF---ERG--VETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           IN L K   +  AL VF++M      G  VE +V+ YN LIDG  K G       + ER+
Sbjct: 347 INHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM 406

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +    PN VTYN +I+G CK    +   E++D+M K+    +  T  + + G+CK G 
Sbjct: 407 RSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           + GA   + EM   G+  +AVTY A+I  FC    I++  EL++ M   GC  + + Y  
Sbjct: 467 INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYT 526

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI GL + GK+D A  +   ++E   + D  +  VLING C+   L++A ++L E+E  G
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                              K +  T N+L++ F +      A  L K+M ++G  PTVV+
Sbjct: 587 ------------------IKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVT 628

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           Y  LI+  C      EA    ++M       P+ + Y++LIN LC+  ++D+AL L    
Sbjct: 629 YGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDM 688

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
             KG  P+   +N +  GL     +  A +L   M +  C P+ +T   L + L   G+ 
Sbjct: 689 KVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET 748

Query: 555 DK 556
            K
Sbjct: 749 AK 750



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 228/463 (49%), Gaps = 32/463 (6%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNVMINGLCK---CGRF---DECL 226
           NILID  F+KG    A  + + ++   + +P N  T +++ + L K    GR    +E +
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  +  ++E   +S      I  LC++G  + A  V   +++ G  ++A + NA++   
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA-- 343
            RA + K    L   M       NVV++ ILI  L +  +VDEA+ ++E +     N   
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375

Query: 344 ---DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM-DKHGCKLNAY 399
              D  T+  LI+GLCK                   GR  +   LV RM  +  C  N  
Sbjct: 376 VEPDVITYNTLIDGLCK------------------VGRQEEGLGLVERMRSQPRCMPNTV 417

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N L++G+ +AS +E A  LF +M++ G  P VV+ NTL++G+CK  R   A  F  EM
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             KG K + +TY+ LI   C    I+ A++L  + L+ G +PD  +Y  LI GL  AGK+
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A  + S MK+    P++V++N L++G  +    D+A E+   +    ++PD ++YN  
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL 597

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +         S A   +   +  G++PT +T+  L+ A   NG
Sbjct: 598 ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNG 640



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 21/357 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C     C+    E A+   + + + G+ P+V +  T+++G+ K G + GA+  F+EM 
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G++ N V Y  LI  F    +  +A E+++ + +E    P+ + Y  +I+GL + G+ 
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM-LEAGCSPDAIVYYTLISGLSQAGKL 537

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D    +  +MK+     D  ++   I+G C+   ++ A  + +EM  +GI  D VTYN +
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL 597

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW-ELLREKN 340
           I  F + G       L + M ++G +  VV+Y  LI     NG +DEA+ I+ ++     
Sbjct: 598 ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              ++  + +LIN LC+   ++ A+                  SL++ M   G K N  T
Sbjct: 658 VPPNTVIYNILINSLCRKNQVDLAL------------------SLMDDMKVKGVKPNTNT 699

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            N++  G  + + L  A  L   M+   C+P  ++   L   L  V    +  SFV+
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 14/262 (5%)

Query: 54  VVHVSRILELI-EIQKCYCPED--VALSVIQAYGKNSMPDKALDVFQRMNEI-------- 102
           V ++ + +EL  E+ +  C  D  V  ++I    +    D+A  V  +M E         
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F       CRK + ++A   L  +   G+KPD  +Y T+I+   K+GD   A  +  +M 
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G+   VV Y  LI  +   G+   A +I+  +   + V PN V YN++IN LC+  + 
Sbjct: 619 KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D  L + D MK    + ++ T+ +   GL +   +  A  +   M E     D +T   +
Sbjct: 679 DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738

Query: 283 IDGFCRAG---KIKECFELWEV 301
            +     G   K+K   + +EV
Sbjct: 739 TEWLSAVGETAKLKSFVQGYEV 760


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 269/535 (50%), Gaps = 22/535 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F++A+  L  +  +G  PD  ++ T+I+GL K G    A  V +++ +RG+  +
Sbjct: 136 LCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 195

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +  +I     K + +        +V+     P V+ +N++ING CK    D   ++ 
Sbjct: 196 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     + FT+   I GLCKA  V  A+++  +MV  G   + VTY+ +I+G C+ 
Sbjct: 256 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQ 315

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ + +EL+++M R+ C  NVV++NILI GL +  +++EA  ++  +RE  C  D  T+
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMD 390
             LI+GLCK+  +++A Q+   + E G                   GR+ADA  + + + 
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   +  T  SL+  + + S+    + L +EM+ KG  P V + + ++ GL +     
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK---GFTPDVTMYN 507
            A      M  +G   D + Y+L++ G+ ++ K D AL +  Q + K    F P  +  +
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L+  LC  GK +DA QL   M +R     + +YN L+ GL +    D+A +++  ++  
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              P+I + N+ +  LCS +++ DA+E +      G  P   T + L+     +G
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 670



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 272/572 (47%), Gaps = 60/572 (10%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C   +LCR  + ++A     +   +   P+ ++YG +I G   +GDL  A+ + +EM   
Sbjct: 27  CALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSS 86

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G E N V +  L+ G    G  + A E +    M     P+V+TY  +++ LCK G+FDE
Sbjct: 87  GFEGNAVVHTTLMKGLCDAGRVVEALEHFR--AMAKDCAPDVMTYTALVHALCKAGKFDE 144

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI------------ 272
              M   M       D+ T+ + I GLCK G+ E A RV  ++++ G+            
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 273 -----------------------FVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
                                  F   V  +N +I+GFC+A  +   ++L EVM  KGC+
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV ++ ILI GL +  +V EA  + E +    C+ +  T+  +INGLCK G ++ A ++
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
              +E                      R+ +A  L +RM + GC  +  T NSL++G  +
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 411 ASKLENAIFLFKEMSRKGCSPT-VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           + +++ A  LF+ +   G S    V+Y+TL +G   + R  +A      +++KG+ PD+ 
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LI   C++ +    ++L  +   KGF P V   + ++ GL      E A+QL+ +M
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 504

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR---PDIISYNITLKGLCSC 586
             R C  + + YN +++G+ +    DKAL +   ++++R R   P   + +  ++ LC  
Sbjct: 505 AARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 564

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +  DA + L+    RG      +++ L+  +
Sbjct: 565 GKTDDAKQLLHKMSERGFAAAVSSYNRLLSGL 596



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 256/494 (51%), Gaps = 28/494 (5%)

Query: 110 LCRK-RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           LC K    E A + L  +  KG  P V  +  VING  K+ DL  A  + + M E+G   
Sbjct: 206 LCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVP 265

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NV  + ILI G  K      A+++ E++VM     PNVVTY+ +INGLCK G+ D+  E+
Sbjct: 266 NVFTFTILITGLCKANRVGEAQQLLEKMVM-GGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M++     +  T+   I GLCKA  +E A ++Y  M E+G   D +TYN++IDG C+
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 289 AGKIKECFELWEVMGRKG--CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + ++ E F+L++ +   G    N V+Y+ L  G    G++ +A  I+ +L +K  + D  
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 347 THGVLINGLCKN----------------GY---LNKAIQILNEVEEGGEGRLADAASLVN 387
           T+  LI   CK                 G+   +N    +L  + EG       A  L +
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE--RAIQLFD 502

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK---GCSPTVVSYNTLINGLC 444
            M   GC  +A   N ++ G  +ASK + A+ + +++  K     +P+  + + L+  LC
Sbjct: 503 SMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 562

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +V +  +A   + +M E+G+   + +Y+ L++GL + ++ D A ++    +  G  P+++
Sbjct: 563 QVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 622

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             N++I  LCSA KV+DA +L   M K  C P++ T NTL+ G  K+G  D A ++   +
Sbjct: 623 TVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 682

Query: 565 LEERLRPDIISYNI 578
            E  L P+  ++++
Sbjct: 683 TEAGLEPNDTTHDL 696



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 234/443 (52%), Gaps = 25/443 (5%)

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           W R    + V  NV + N  ++ LC+  R  E L ++          + FTY   I G  
Sbjct: 13  WAR----SRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS 312
            AG+++ A ++  EM  SG   +AV +  ++ G C AG++ E  E +  M +    +V++
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMT 128

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y  L+  L + GK DEA  +   +  + C  D+ T   LI+GLCK G   +A ++L +V 
Sbjct: 129 YTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 188

Query: 373 EGGEGRLADAA--SLVNRM-DKH----------------GCKLNAYTCNSLMNGFIQASK 413
           + G G  +DAA  +++ R+ +K+                G        N ++NGF +A  
Sbjct: 189 QRGMGN-SDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L++A  L + M  KGC P V ++  LI GLCK  R GEA   +++M+  G  P+++TYS 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +INGLC+  ++D A +L     ++   P+V  +NILI GLC A ++E+A QLY  M++  
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR-PDIISYNITLKGLCSCSRMSDA 592
           C P+++TYN+L+DGL K+   D+A +++  I E  +   + ++Y+    G  +  RM+DA
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 593 FEFLNDALCRGILPTTITWHILV 615
               +  + +G  P   T+  L+
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLI 450



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF + +R      V S N  ++ LC++ R  EA +  +  + +   P+  TY +LI G
Sbjct: 7   VLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRG 66

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
              +  +D+A++L  +    GF  +  ++  L+ GLC AG+V +AL+ +  M K +C P+
Sbjct: 67  FSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPD 125

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++TY  L+  L K G  D+A  +   ++ +   PD ++++  + GLC       AF  L 
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185

Query: 598 DALCRGILPTTITWHILVRAVMN 620
           D + RG+  +   +  +++ + N
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCN 208



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++ LC+  +   AL L    + +   P+   Y ILI G  SAG ++ A+QL   MK    
Sbjct: 29  LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             N V + TLM GL   G   +ALE +  + ++   PD+++Y   +  LC   +  +A  
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNGA 623
            L + + +G  P T+T+  L+  +   G+
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGS 176


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 237/443 (53%), Gaps = 21/443 (4%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N L+  F +K     A ++++  +      P+ +TY+ +ING CK   F +   + D M+
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCS-PDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           K      +  Y + I GLC  G V+ A   YR+M +       +TY  ++D  C++ +I 
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARIS 119

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +   + E M   GC  NVV+YN LI G  + G +DEA+ ++  + E +C+ D  T+ +LI
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +G CK                  + R  D A L+  M K+GC+ N  T N+LM+  +++ 
Sbjct: 180 DGYCK------------------QERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K  +A  L + M R+ C P+  ++N +I+  CKV +   AY   + M ++G  PD+ TY+
Sbjct: 222 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 281

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++I+G C++ +ID A +L  +  + G  PDV  YN ++ GLC A +V++A ++Y  ++  
Sbjct: 282 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 341

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               ++VT +TL+DGL K+   D A ++   +      PD+++Y I + G C   ++  +
Sbjct: 342 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 401

Query: 593 FEFLNDALCRGILPTTITWHILV 615
             F ++ L +G +PT IT+ I++
Sbjct: 402 LAFFSEMLDKGCVPTVITYSIVI 424



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 220/464 (47%), Gaps = 89/464 (19%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C      RK++ ++A     +       PD  +Y T+ING  K+ D   A  + DEM +R
Sbjct: 3   CLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR 62

Query: 165 GV----------------------------------ETNVVCYNILIDGFFKKGDYMRAK 190
           G+                                    +V+ Y IL+D   K      A 
Sbjct: 63  GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDAS 122

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            I E ++ E    PNVVTYN +ING CK G  DE + ++++M +N    D FTY   I G
Sbjct: 123 LILEDMI-EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 251 LCKAGNVEGAERVYREM-------------------VESGIFVDA--------------- 276
            CK    +   ++ +EM                   V+SG ++DA               
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 277 -VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
             T+N MID FC+ G++   +EL+++M  +GCL ++ +YNI+I G     ++D+A  + E
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            + E  C  D  T+  +++GLCK   +++A ++   +  GG                   
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF----------------- 344

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
            L+  TC++L++G  ++ +L++A  L +EM R G +P VV+Y  LI+G CK ++  ++ +
Sbjct: 345 -LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 403

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           F  EML+KG  P +ITYS++I+ LC+S ++     L    L++G
Sbjct: 404 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 129/222 (58%), Gaps = 1/222 (0%)

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           CN L++ F++  K + A  LFK      CSP  ++Y+TLING CK   F +AY  + EM 
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++G  P    Y+ +I GLC + ++D AL +  + +Q+   P V  Y IL+  LC + ++ 
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARIS 119

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA  +  +M +  C PN+VTYNTL++G  K G+ D+A+ ++N +LE    PD+ +YNI +
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            G C   R  D  + L + +  G  P  IT++ L+ +++ +G
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 173/562 (30%), Positives = 256/562 (45%), Gaps = 62/562 (11%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR      A    + +  +GL  DV  Y T++ G  ++G +  A  V D M E GV+ NV
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y   I  + +      A +++E +V    V  +VVT + ++ GLC+ GRF E   ++ 
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K     +  TYC+ I  L KAG  +    +  EMV  G+ +D VTY A++D   + G
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 291 KIKEC-----FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           K  E      F L + +   G    V+Y +LI  L +   VDEA  +   + EK+ + + 
Sbjct: 359 KTDEVKDTLRFALSDNLSPNG----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNR 388
            T   +ING  K G L+KA +    ++E G        G L D          A  + + 
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G K+N +  +SL+NG  Q  K+E A+ LFK+ S  G S   V+Y TLI+GL K   
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A+ F +E++++   PD + Y++ IN LC   K   A     +    G  PD + YN 
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I   C  G+   AL+L   MK  +  PNL+TYNTL+ GLF TG  +KA  + N ++   
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 569 LRP-----------------------------------DIISYNITLKGLCSCSRMSDAF 593
             P                                   DI  YN  L+ LC       A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 594 EFLNDALCRGILPTTITWHILV 615
             L + L  GI P TIT++ L+
Sbjct: 715 VVLEEMLGSGIAPDTITFNALI 736



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + ++ K  L       L P+  +Y  +I+ L K+ ++  A  V  EM E+ +  N
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ +I+GF K+G   +A E ++R++ E  + PNVVTY  +I+G  K    D  LE++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + + F   S ++GL + G +E A  ++++   SG+ +D V Y  +IDG  +A
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F+   E+M R    + V YN+ I  L   GK  EA S    +R      D +T+
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             +I   C+ G   KA+++L+E++                   G G +  A  L+N M  
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   ++ T   ++    Q+ +L+  + + + M   G    +  YNTL+  LC      +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++EML  G  PD IT++ LI G C+S  +D A     Q L +  +P++  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL S G++ +A  +   M+K    PN +TY+ L  G  K  +  +A+ ++  ++ +   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + +YN  +        M+ A E   D   RG+ PT+ T+ ILV
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 248/524 (47%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F +A      + + G  P+  +Y T+I+ L K+G     L++  EM  RGV  +
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  L+D   K+G     K+   R  +  ++ PN VTY V+I+ LCK    DE  ++ 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTL-RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     +  T+ S I+G  K G ++ A    R M E GI  + VTY  +IDGF + 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
                  E++  M  +G  +N    + L+ GL +NGK++EA+++++       + D   +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GL K G +  A +   E+ +                    G+  +A S +  M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +  T N+++    +  +   A+ L  EM      P +++YNTL+ GL       +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + EM+  G+ P  +T+  ++    QS+++D+ L +    +  G   D+T+YN L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G    A  +   M      P+ +T+N L+ G  K+   D A   +  +L + + P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +I ++N  L GL S  R+ +A   L +    G+ P  +T+ IL 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 260/547 (47%), Gaps = 62/547 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR  Q + A     +L ++G      DV  + T+I G  + GD   AL+V D M  +G+
Sbjct: 145 LCRNGQVDAAA----ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV YN L+ GF + G    A+ + + ++ E  V PNV TY   I   C+    +E  
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLD-MMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++++ M +N    D  T  + + GLC+ G    A  ++REM + G   + VTY  +ID  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 287 CRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            +AG+ KE   L  E++ R   +++V+Y  L+  L + GK DE           N + + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ VLI+ LCK   +++A Q+L E+EE                       N  T +S++
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEE------------------KSISPNVVTFSSVI 421

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING-----------------LC---K 445
           NGF++   L+ A    + M  +G +P VV+Y TLI+G                 LC   K
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 446 VERF---------------GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           V +F                EA +  K+    G   D + Y+ LI+GL ++  +  A K 
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + + +   PD  +YN+ I+ LC  GK ++A    + M+     P+  TYNT++    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G+  KAL++ + +    ++P++I+YN  + GL     +  A   LN+ +  G  P+++T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 611 WHILVRA 617
              +++A
Sbjct: 662 HRRVLQA 668



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 231/492 (46%), Gaps = 56/492 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A++ L  + EK + P+V ++ +VING VK G L  A      M ERG+  N
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LIDGFFK      A E++  ++ E  V  N    + ++NGL + G+ +E + ++
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
                +    D   Y + I GL KAG++  A +  +E+++  +  DAV YN  I+  C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE       M   G   +  +YN +I      G+  +A+ +   ++  +   +  T+
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLADAASLVNRMD----------- 390
             L+ GL   G + KA  +LNE+   G         R+  A S   R+D           
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 391 ----------------------------------KHGCKLNAYTCNSLMNGFIQASKLEN 416
                                               G   +  T N+L+ G  ++S L+N
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A   + +M  +  SP + ++NTL+ GL  V R GEA + + EM + G +P+ +TY +L  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 477 GLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           G   QS K++ A++L C+ + KGF P V+ YN LI     AG +  A +L+ +M+KR   
Sbjct: 808 GHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVH 866

Query: 536 PNLVTYNTLMDG 547
           P   TY+ L+ G
Sbjct: 867 PTSCTYDILVSG 878



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 17/380 (4%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRG 319
           A  V  EM + G+  D VT N ++ G CR G++     L +  G    L+V+ +N LI G
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
               G    A+S+ + +  +    D   +  L+ G C+ G ++ A  +L+ ++E G    
Sbjct: 179 YCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                           + +A  L   M ++G  L+  T ++L+ G  +  +   A  LF+
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM + G +P  V+Y TLI+ L K  R  E  S + EM+ +G   D++TY+ L++ L +  
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K D         L    +P+   Y +LI  LC A  V++A Q+   M++++  PN+VT++
Sbjct: 359 KTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           ++++G  K G  DKA E    + E  + P++++Y   + G         A E  +D LC 
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+         LV  +  NG
Sbjct: 479 GVKVNKFIVDSLVNGLRQNG 498



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 225/532 (42%), Gaps = 64/532 (12%)

Query: 63  LIEIQ-KCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           L+E++ K   P  V  S VI  + K  + DKA +  + M E         +G       +
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            +  + A    + +  +G+K + +   +++NGL ++G +  A+A+F +    G+  + V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  LIDG FK GD   A +  + L M+ ++ P+ V YNV IN LC  G+F E       M
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +    + D  TY + I   C+ G    A ++  EM  S I  + +TYN ++ G    G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 293 KEC-----------------------------------FELWEVMGRKGC-LNVVSYNIL 316
           ++                                     ++ E M   G   ++  YN L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA------------ 364
           ++ L  +G   +A  + E +       D+ T   LI G CK+ +L+ A            
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 365 ---IQILNEVEEGGE--GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
              I   N +  G E  GR+ +A +++  M+K G + N  T + L  G  + S    A+ 
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L+ EM  KG  P V +YN LI+   K     +A    K+M ++G  P   TY +L++G  
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +      K      +KGF+P     + +       G    A +L  N+ +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 34/273 (12%)

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL------------------- 420
           A A +++  M K G   +  T N+L+ G  +  +++ A  L                   
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176

Query: 421 ---------------FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
                             M+ +G    VV YNTL+ G C+  +   A   +  M E G  
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TY+  I   C++K ++ A  L    ++ G   DV   + L+ GLC  G+  +A  L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M K    PN VTY TL+D L K G   + L +   ++   +  D+++Y   +  L  
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +  +  + L  AL   + P  +T+ +L+ A+
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 284/557 (50%), Gaps = 30/557 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGILC--RKRQFEKAKRF 122
           P+DV   S++    K +  D+A+++F++M +       +     I+      +F++A   
Sbjct: 164 PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L     KG  P V +Y  ++  L K G    AL +F+EM +R    N+  YNI+I    K
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCK 282

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+   A ++ + +  E  ++PNV T N+MI+ LCK  + DE   +++ M       D  
Sbjct: 283 AGNVEAAFKVRDAM-KEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGA 341

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+CS I GL K G V+ A R+Y  M+++    + V Y ++I  F +  + ++  ++++ M
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            R GC  +++  N  +  + + G+ ++  +++E ++ +    D+ ++ +LI+ L K G+ 
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            +  +                  L   M   GC L+    N++++GF ++ K+  A  L 
Sbjct: 462 RETYE------------------LYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 503

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +EM   G  PTVV+Y ++++GL K++R  EAY   +E    G + + + YS LI+G  + 
Sbjct: 504 EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKV 563

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++D A  +  + +QKG TP+V  +N L+ GL  A ++ +AL  + +MK   C PN +TY
Sbjct: 564 GRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITY 623

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L++GL K    +KA   W  + ++ L+P+ I+Y   + GL     ++ A         
Sbjct: 624 CILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRA 683

Query: 602 RGILPTTITWHILVRAV 618
            G +P + +++ ++  +
Sbjct: 684 SGGIPDSASYNAMIEGL 700



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 261/522 (50%), Gaps = 28/522 (5%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRMNE-------IFGCEAGILCRKRQFEKAKRFL 123
           P  VA + ++   GK    DKAL +F+ M          +    G+LC+    E A +  
Sbjct: 234 PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVR 293

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           +++ E GL P+V +   +I+ L K+  L  A ++F+ M  +    +   +  LIDG  K+
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQ 353

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G    A  I+ER+ ++    PNVV Y  +I    KC R ++  +M+  M ++    D   
Sbjct: 354 GRVDDAYRIYERM-LDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLML 412

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
             +++  + KAG  E    ++ E+   G   D  +Y+ +I    +AG  +E +EL+  M 
Sbjct: 413 LNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMK 472

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +GC L+  +YN +I G  ++GKV++A  + E ++    +    T+G +++GL K   L+
Sbjct: 473 DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLD 532

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +A  +  E +  G                  GR+ +A  ++  M + G   N YT N L+
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLL 592

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G ++A ++  A+  F+ M    C+P  ++Y  LINGLCKV +F +A+ F +EM ++G K
Sbjct: 593 DGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLK 652

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+ ITY+ +I+GL +S  +  A  L  +F   G  PD   YN +I GL  A +  DA QL
Sbjct: 653 PNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQL 712

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           +   + + C  +  T   L+D L K  +C +   I   +L E
Sbjct: 713 FEETRLKGCSIHTKTCVALLDALHK-AECLEQAAIVGAVLRE 753



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 254/522 (48%), Gaps = 20/522 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+  +A   L  +     +P   +Y T+I  L + G+    LA+F++M E G E NV 
Sbjct: 38  KSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVH 97

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
               LI  F ++G    A  + + +   T    ++V YNV I+   K G+ D   + +  
Sbjct: 98  LLTTLIRVFSREGRVDAALSLLDEMKSNT-FDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK N    D  TY S +  LCKA  ++ A  ++ +M ++     A  YN MI G+  AGK
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
             E + L E    KGC+ +VV+YN ++  L + GK D+A+ I+E ++ ++   +  T+ +
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNI 275

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           +I  LCK G +  A ++ + ++E G                   +L +A S+   MD   
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  +  T  SL++G  +  ++++A  +++ M      P VV Y +LI    K +R  + +
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              KEM+  G  PD++  +  ++ + ++ + +    L  +   +GF PD   Y+ILIH L
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
             AG   +  +LY  MK + CV +   YNT++DG  K+G  +KA ++   +      P +
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV 515

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++Y   + GL    R+ +A+    +A   GI    + +  L+
Sbjct: 516 VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLI 557



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/619 (26%), Positives = 291/619 (47%), Gaps = 48/619 (7%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQ 81
           LALF+   +E GY  + HL   ++R      +     R+             D ALS++ 
Sbjct: 81  LALFNQ-MQELGYEVNVHLLTTLIR------VFSREGRV-------------DAALSLLD 120

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
               N+  D  + ++    + FG       +  + + A +F + +   GL PD  +Y ++
Sbjct: 121 EMKSNTF-DADIVLYNVCIDCFG-------KVGKVDMAWKFFHEMKANGLVPDDVTYTSM 172

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +  L K+  L  A+ +F++M +         YN +I G+   G +  A  + ER   +  
Sbjct: 173 MGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGC 232

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+VV YN ++  L K G+ D+ L +++ MK++    +  TY   I  LCKAGNVE A 
Sbjct: 233 I-PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAF 290

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           +V   M E+G+F +  T N MID  C+A K+ E   ++E M  K C  +  ++  LI GL
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G+VD+A  I+E + + +   +   +  LI    K        ++  E+   G     
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G      +L   +   G   +  + + L++  ++A        L+  
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +GC     +YNT+I+G CK  +  +AY  ++EM   G  P ++TY  +++GL +  +
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D A  L  +    G   +  +Y+ LI G    G+V++A  +   M ++   PN+ T+N 
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DGL K  + ++AL  +  + + +  P+ I+Y I + GLC   + + AF F  +   +G
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG 650

Query: 604 ILPTTITWHILVRAVMNNG 622
           + P TIT+  ++  +  +G
Sbjct: 651 LKPNTITYTAMISGLAKSG 669



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 246/525 (46%), Gaps = 18/525 (3%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G L    + ++     N + E G + +V+   T+I    + G +  AL++ DEM     +
Sbjct: 69  GALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            ++V YN+ ID F K G    A + +  +     + P+ VTY  M+  LCK  R DE +E
Sbjct: 129 ADIVLYNVCIDCFGKVGKVDMAWKFFHEM-KANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++++M++N +   ++ Y + I G   AG  + A  +       G     V YN ++    
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           + GK  +   ++E M R    N+ +YNI+I  L + G V+ A  + + ++E     +  T
Sbjct: 248 KKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRT 307

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMD 390
             ++I+ LCK   L++A  I   ++                  G +GR+ DA  +  RM 
Sbjct: 308 INIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERML 367

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                 N     SL+  F +  + E+   ++KEM R GCSP ++  NT ++ + K     
Sbjct: 368 DADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETE 427

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +  +  +E+  +G+ PD  +YS+LI+ L ++       +L      +G   D   YN +I
Sbjct: 428 KGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVI 487

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C +GKV  A QL   MK     P +VTY +++DGL K    D+A  ++       + 
Sbjct: 488 DGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIE 547

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + + Y+  + G     R+ +A+  + + + +G+ P   TW+ L+
Sbjct: 548 LNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLL 592



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 221/497 (44%), Gaps = 45/497 (9%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L    N   A  + D A +E G   +    + ++ RL   + +     I E ++ +
Sbjct: 276 IIGMLCKAGNVEAAFKVRD-AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK 334

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRM----------------NEIFGCEAGILC 111
            C        S+I   GK    D A  +++RM                   F C+     
Sbjct: 335 VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCD----- 389

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RK   E   +    +   G  PD+    T ++ + K+G+     A+F+E+  RG   +  
Sbjct: 390 RK---EDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ILI    K G      E++  +  +  V  +   YN +I+G CK G+ ++  ++ + 
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVL-DTRAYNTVIDGFCKSGKVNKAYQLLEE 505

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK         TY S + GL K   ++ A  ++ E   +GI ++ V Y+++IDGF + G+
Sbjct: 506 MKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E + + E M +KG   NV ++N L+ GL++  +++EA+  ++ +++  C  +  T+ +
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LINGLCK    NKA     E                  M K G K N  T  ++++G  +
Sbjct: 626 LINGLCKVRKFNKAFVFWQE------------------MQKQGLKPNTITYTAMISGLAK 667

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  +  A  LF+     G  P   SYN +I GL    R  +AY   +E   KG      T
Sbjct: 668 SGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKT 727

Query: 471 YSLLINGLCQSKKIDMA 487
              L++ L +++ ++ A
Sbjct: 728 CVALLDALHKAECLEQA 744



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 19/300 (6%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+   +++ K+ EA  + +++R        + +  LI  L + G  ++ +          
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRML---------- 81

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                   +L N+M + G ++N +   +L+  F +  +++ A+ L  EM        +V 
Sbjct: 82  --------ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVL 133

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN  I+   KV +   A+ F  EM   G  PD +TY+ ++  LC++ ++D A+++  Q  
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           Q    P    YN +I G  SAGK ++A  L    + + C+P++V YN ++  L K G  D
Sbjct: 194 QNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD 253

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL I+  +  + + P++ +YNI +  LC    +  AF+  +     G+ P   T +I++
Sbjct: 254 KALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 110/241 (45%)

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            ++  M   G     YTC  L+   +++ KL  A  L + M      P   +Y TLI  L
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            +V       +   +M E G++ ++   + LI    +  ++D AL L  +     F  D+
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN+ I      GKV+ A + +  MK    VP+ VTY ++M  L K    D+A+EI+  
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + + R  P   +YN  + G  S  +  +A+  L     +G +P+ + ++ ++  +   G 
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 624 S 624
           +
Sbjct: 252 T 252



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 71/169 (42%)

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           + +   F      + EM   G+ P   T   L+    +S+K+  A  L        F P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
            + Y  LI  L   G+ +  L L++ M++     N+    TL+    + G  D AL + +
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            +       DI+ YN+ +       ++  A++F ++    G++P  +T+
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTY 169


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 263/561 (46%), Gaps = 59/561 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + E A+R ++ +      PD +++  +I  L   G +  ALAVFD+M  RG   +V
Sbjct: 141 CRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSV 197

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y+IL+D   K   Y +A  + + +  +    P++VTYNV+IN +C  G  DE L +  
Sbjct: 198 VTYSILLDATCKASGYRQAMVLLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILS 256

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +  +  + D+ TY   +  LC +   +  E ++ EM  +    D VT+N ++   C+ G
Sbjct: 257 DLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQG 316

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI----------------- 332
            +    ++ + M   GC+ ++V+Y+ ++ GL + G+VD+A+ +                 
Sbjct: 317 LVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 376

Query: 333 -----------WELLRE-------KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
                      WE   E        +C  D  T   +I  LC+ G +++AI+++ ++ E 
Sbjct: 377 TVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN 436

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 E  + DA  L++ +  +GCK +  T N+L+ G     + E+A
Sbjct: 437 GCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDA 496

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L   M    C P   ++NT+I  LC+     +A   +K M E G  P+  TY+++++ 
Sbjct: 497 EQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDA 556

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           L ++ K   ALKL         TPD+  YN +I  +  AGK+E+AL L   M      P+
Sbjct: 557 LLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPD 614

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            +TY +L  G+ +    D+A+ +   + +  L PD   YN  L G C   R   A +   
Sbjct: 615 TITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFA 674

Query: 598 DALCRGILPTTITWHILVRAV 618
             +  G +P   T+ IL+ A+
Sbjct: 675 HMVSSGCMPDESTYIILLEAL 695



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 249/506 (49%), Gaps = 30/506 (5%)

Query: 142 INGLVKSGDLLGALAVFDEMFERG-----VETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +  L++  ++  ALA+ D +   G     +   VV  NILI      G    A+ ++  L
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                    VVTYN M+NG C+ GR ++   +   M       D+FT+   I  LC  G 
Sbjct: 125 ----GASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGR 177

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           V  A  V+ +M+  G     VTY+ ++D  C+A   ++   L + M  KGC  ++V+YN+
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG- 374
           LI  +   G VDEA++I   L    C  D+ T+  ++  LC +    +  ++  E+    
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 375 ----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            +G +  A  +V+ M +HGC  +  T +S+++G     ++++A+
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L   +   GC P  ++Y T++ GLC +E++  A   + EM+     PD +T++ +I  L
Sbjct: 358 ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           CQ   +D A+K+  Q  + G  PD+  YN +I GLC+   ++DA++L SN++   C P++
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VT+NTL+ GL      + A ++  +++     PD  ++N  +  LC    +  A E L  
Sbjct: 478 VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI 537

Query: 599 ALCRGILPTTITWHILVRAVMNNGAS 624
               G +P   T++I+V A++  G +
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKT 563



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 250/545 (45%), Gaps = 63/545 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +   A+R   +L   G    V +Y T++NG  ++G +  A  +   M       +
Sbjct: 108 LCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPD 161

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI     +G    A  +++ + +     P+VVTY+++++  CK   + + + + 
Sbjct: 162 TFTFNPLIRALCVRGRVPDALAVFDDM-LHRGCSPSVVTYSILLDATCKASGYRQAMVLL 220

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+    E D  TY   I+ +C  G+V+ A  +  ++   G   DAVTY  ++   C +
Sbjct: 221 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS 280

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            + KE  EL+  M    C  + V++N ++  L + G VD AI + + + E  C  D  T+
Sbjct: 281 ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +++GLC                    GR+ DA  L++R+  +GCK +     +++ G 
Sbjct: 341 SSILDGLCD------------------VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               + E+A  L  EM    C P  V++NT+I  LC+      A   V++M E G  PD+
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I+GLC  + ID A++L       G  PD+  +N L+ GLCS  + EDA QL  N
Sbjct: 443 VTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVN 502

Query: 529 -----------------------------------MKKRNCVPNLVTYNTLMDGLFKTGD 553
                                              M +  C+PN  TYN ++D L K G 
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGK 562

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL++ + +      PD+I+YN  +  +    +M +A + L   +  G+ P TIT+  
Sbjct: 563 TQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRS 620

Query: 614 LVRAV 618
           L   +
Sbjct: 621 LAYGI 625



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 209/438 (47%), Gaps = 21/438 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   ++++ +     +      PD  ++ T++  L + G +  A+ V D M E G   +
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y+ ++DG    G    A E+  RL       P+ + Y  ++ GLC   +++   E+ 
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  ++   D  T+ + I  LC+ G V+ A +V  +M E+G   D VTYN++IDG C  
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             I +  EL   +   GC  ++V++N L++GL    + ++A  +   +   +C  D+TT 
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +I  LC+ G L +AI+ L  + E G                  G+  +A  L++ M  
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
               L  Y  N++++   +A K+E A+ L + M   G SP  ++Y +L  G+C+ +    
Sbjct: 576 GTPDLITY--NTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   +  + + G  PD   Y+ ++ G CQ+ + D+A+      +  G  PD + Y IL+ 
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693

Query: 512 GLCSAGKVEDALQLYSNM 529
            L     +++A QL  N+
Sbjct: 694 ALAYECLLDEAKQLLVNL 711



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 30/379 (7%)

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILI 317
           EG +R  R +++     DA+   A++D     G   +C  L           VV  NILI
Sbjct: 59  EGPKRRLRSLIQREEIDDAL---ALVDSIASGGGSGKCLPL----------PVVPCNILI 105

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE- 376
           + L   G+V +A  ++  L     +A   T+  ++NG C+ G +  A ++++ +    + 
Sbjct: 106 KRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDT 162

Query: 377 -------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GR+ DA ++ + M   GC  +  T + L++   +AS    A+ L  E
Sbjct: 163 FTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  KGC P +V+YN LIN +C      EA + + ++   G KPD +TY+ ++  LC S++
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
                +L  +       PD   +N ++  LC  G V+ A+++  +M +  C+P++VTY++
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++DGL   G  D A+E+ + +     +PD I+Y   LKGLCS  +   A E + + +C  
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402

Query: 604 ILPTTITWHILVRAVMNNG 622
             P  +T++ ++ ++   G
Sbjct: 403 CPPDEVTFNTVIASLCQKG 421



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 16/310 (5%)

Query: 71  CPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKA 119
           CP D     +VI +  +  + D+A+ V ++M+E  GC   I         LC +R  + A
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSE-NGCNPDIVTYNSIIDGLCNERCIDDA 461

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
              L++L   G KPD+ ++ T++ GL        A  +   M       +   +N +I  
Sbjct: 462 MELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITS 521

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             +KG  ++A E   +++ E    PN  TYN++++ L K G+  E L++   M       
Sbjct: 522 LCQKGLLLQAIETL-KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TP 578

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D  TY + I  + KAG +E A  + R MV +G+  D +TY ++  G CR         + 
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638

Query: 300 EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             +   G   +   YN ++ G  +N + D AI  +  +    C  D +T+ +L+  L   
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698

Query: 359 GYLNKAIQIL 368
             L++A Q+L
Sbjct: 699 CLLDEAKQLL 708


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 272/557 (48%), Gaps = 31/557 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI------FGCEAGILCRKRQFEK-----AKRFLNSL 126
           + I AY   + P  A  +F RM  +        C   I    R   K     +K   + +
Sbjct: 144 TSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDV 203

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            + G+K +  ++  +I G      L  A+ +  +M +     + V YN ++D   KKG  
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+++   +     + PN  T+N++++G CK G   E  ++ D M +N    D +TY  
Sbjct: 264 NEARDLLLDM-KNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNM 322

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCK G ++ A R+  EM    +  D VTYN +I+G        + FEL + M  KG
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N V+YN++++  ++ GK+D A +    + E   + D  T   LING CK        
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK-------- 434

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      GRL++A  +++ M + G K+N+ T N++++      KL++A  L    S
Sbjct: 435 ----------AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++G     VSY TLI G  K  +  EA     EM EK   P +ITY+ +I GLC S K D
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            ++    + L+ G  PD T YN +I G C  G+VE A Q ++ M K++  P+L T N L+
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GL   G  DKAL+++N  + +    D ++YN  + GLC   R  +AF+ L +   + + 
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 606 PTTITWHILVRAVMNNG 622
           P   T++ ++ A+ + G
Sbjct: 665 PDCYTYNAILSALADAG 681



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 228/467 (48%), Gaps = 43/467 (9%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC+  + ++A R  + +    L PDV +Y T+ING       L    + D+M  +GV+
Sbjct: 325 GGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVK 384

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V YN+++  + K+G    A     R + E+   P+ VT+N +ING CK GR  E   
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNEL-RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M D M +   + +S T  + +H LC    ++ A ++     + G FVD V+Y  +I G+ 
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 503

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + GK  E  +LW+ M  K  + ++++YN +I GL  +GK D++I     L E     D T
Sbjct: 504 KDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDET 563

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  +I G C+ G + KA Q                    N+M K   K + +TCN L+ 
Sbjct: 564 TYNTIILGYCREGQVEKAFQ------------------FHNKMVKKSFKPDLFTCNILLR 605

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G      L+ A+ LF     KG +   V+YNT+I+GLCK +RF EA+  + EM EK   P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKG-----------------------FTPDV 503
           D  TY+ +++ L  + ++  A +   + +++G                         P+ 
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNS 725

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             ++  I+ LC+ GK +DA+ +     ++    +  TY +LM+GL K
Sbjct: 726 VTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 267/543 (49%), Gaps = 49/543 (9%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC+K +  +A+  L  +   GL P+  ++  +++G  K G L  A  V D M +  V  
Sbjct: 256 VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP 315

Query: 169 NVVCYNILIDGFFKKG---DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           +V  YN+LI G  K G   +  R K+  E L     + P+VVTYN +ING   C    + 
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENL----KLLPDVVTYNTLINGCFDCSSSLKG 371

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            E+ D+M+    + ++ TY   +    K G ++ A    R+M ESG   D VT+N +I+G
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           +C+AG++ E F + + M RKG  +N V+ N ++  L    K+D+A  +     ++    D
Sbjct: 432 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVD 491

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             ++G LI G  K+G   +A+++ +E++E          S++             T N++
Sbjct: 492 EVSYGTLIMGYFKDGKSVEAMKLWDEMKEK-----EIIPSII-------------TYNTM 533

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G   + K + +I    E+   G  P   +YNT+I G C+  +  +A+ F  +M++K +
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSF 593

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           KPD+ T ++L+ GLC    +D ALKL   ++ KG   D   YN +I GLC   + E+A  
Sbjct: 594 KPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFD 653

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLR------------- 570
           L + M+++   P+  TYN ++  L   G   +A E  + I+E+ +L+             
Sbjct: 654 LLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIES 713

Query: 571 ---------PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
                    P+ ++++  +  LC+  +  DA   + ++  +GI     T+  L+  ++  
Sbjct: 714 SSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773

Query: 622 GAS 624
             S
Sbjct: 774 RKS 776



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 197/479 (41%), Gaps = 119/479 (24%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V  +  I     C R     ++++RMK+   + +  T  + I+ L +         VY  
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVR---YPSKPSVY-- 194

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
            +   IF D +                        +G K  +N  ++NILI G     K+
Sbjct: 195 -LSKAIFSDVIK-----------------------LGVK--VNTNTFNILIYGCCIENKL 228

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            EAI +   +++ +C  D+ ++  +++ LCK G LN+A  +L +                
Sbjct: 229 SEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD---------------- 272

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M  +G   N  T N L++G+ +   L+ A  +   M++    P V +YN LI GLCK 
Sbjct: 273 --MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKD 330

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGL--CQSK---------------------- 482
            +  EA+    EM      PD++TY+ LING   C S                       
Sbjct: 331 GKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTY 390

Query: 483 -----------KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG-------------- 517
                      K+D A     +  + GF+PD   +N LI+G C AG              
Sbjct: 391 NVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSR 450

Query: 518 ---------------------KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                                K++DA +L S+  KR    + V+Y TL+ G FK G   +
Sbjct: 451 KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE 510

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           A+++W+ + E+ + P II+YN  + GLC   +   + + LN+ L  G++P   T++ ++
Sbjct: 511 AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTII 569



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 3/226 (1%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY---SFVKE 458
           ++ +  ++  ++  +A  +F  M R    P +++ NTLIN L +       Y   +   +
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSD 202

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           +++ G K +  T+++LI G C   K+  A+ L  +       PD   YN ++  LC  GK
Sbjct: 203 VIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGK 262

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + +A  L  +MK    +PN  T+N L+ G  K G   +A ++ + + +  + PD+ +YN+
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNM 322

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + GLC   ++ +AF   ++     +LP  +T++ L+    +  +S
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 33/228 (14%)

Query: 57  VSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI 109
           + ++ EL+E      P++    ++I  Y +    +KA     +M       ++F C   +
Sbjct: 547 IDKLNELLE--SGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 110 --LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             LC +   +KA +  N+   KG   D  +Y T+I+GL K      A  +  EM E+ + 
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY----------------------PN 205
            +   YN ++      G    A+E   R+V +  +                       PN
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            VT++  IN LC  G++ + + M     +        TY S + GL K
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 177/645 (27%), Positives = 308/645 (47%), Gaps = 38/645 (5%)

Query: 3   ISAKRLLNLLKAEK---NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +A     +P TALA F+   R PG+ H+      +L+ L   +   +  +
Sbjct: 52  VTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDK 111

Query: 60  ILELIEIQKCY-CPEDV--ALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           +  ++ +  C    ED+  A+  IQA  +      AL       + +      L R    
Sbjct: 112 L--VVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALS-----PKCYNLALRSLLRFDMT 164

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E   +  + L ++GL PD  +Y T+I    K G L  A   F  + E G+E +    N L
Sbjct: 165 EHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNAL 224

Query: 177 IDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           + G+ + GD  +A   W  ++M       N  +Y ++I GLC+     E L +   M ++
Sbjct: 225 LLGYCRTGDLRKA--CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQD 282

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               +  TY   I GLCK G +  A  +  EM   G+     TYNAMIDG+C++G++K+ 
Sbjct: 283 GCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDA 342

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +  +M   GC  +  +YN LI GL   GK DEA  +      +  +    T   +ING
Sbjct: 343 LGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIING 401

Query: 355 LCKNGYLNKAIQILN---------EVEEGG--------EGRLADAASLVNRMDKHGCKLN 397
            CK   ++ A+++ +         +++  G        + RL +A   +N +  +G   N
Sbjct: 402 YCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPN 461

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
                S+++ + +  K+  A+ +FK    +GC P   +Y++LI GL + ++  +A + + 
Sbjct: 462 VVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 521

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M E G  P +ITY+ LI G C+  + D A +L     Q G TPD   YN+L   LC +G
Sbjct: 522 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 581

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           + E+A   YS + K+  V   VTY +L+DG  K G+ + A  +   ++ E  + D  +Y+
Sbjct: 582 RAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYS 638

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + L+ LC   ++++A   L+    RG+    + + I++  ++  G
Sbjct: 639 VLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEG 683



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 164/641 (25%), Positives = 287/641 (44%), Gaps = 62/641 (9%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           A SP  ++  LR L+   +  H+ ++   + +Q+   P+ V   ++I AY K      A 
Sbjct: 145 ALSPKCYNLALRSLLRFDMTEHMGKLYSQL-VQEGLLPDTVTYNTMIMAYCKEGSLAIAH 203

Query: 94  DVFQRMNE------IFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
             F+ + E       + C A +L  CR     KA   L  +   G + + YSY  +I GL
Sbjct: 204 RYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGL 263

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            ++  +  AL +   M + G   N+  Y +LI G  K+G    A+ + + +     V P+
Sbjct: 264 CETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMP-RRGVVPS 322

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           V TYN MI+G CK GR  + L +   M+ N    D +TY S IHGLC  G  + AE +  
Sbjct: 323 VWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLN 381

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
             +  G     +T+  +I+G+C+A KI +   +  +M    C L++ +Y +LI  L++  
Sbjct: 382 GAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKH 441

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
           ++ EA      +     + +   +  +I+  CK G +  A+++    E  G         
Sbjct: 442 RLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYS 501

Query: 376 --------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   + +L  A +L+ +M + G      T  +L+ G  +  + +NA  LF+ M + 
Sbjct: 502 SLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 561

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSF-------------------------------- 455
           G +P   +YN L + LCK  R  EAYSF                                
Sbjct: 562 GLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAAL 621

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           +++M+ +G K D  TYS+L+  LC+ KK++ AL +  Q   +G   ++  Y I+I  +  
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK + A  +++ M      P+ +TY   +    K G  ++A  +   +    + PD+++
Sbjct: 682 EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVT 741

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           YN+ + G      M  AF  L   +     P   T+ +L++
Sbjct: 742 YNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLK 782



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 251/546 (45%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + + A R  + +     K D+ +YG +I+ L+K   L  A    +E+F  G+  NV
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +ID + K G    A E++ +L       PN  TY+ +I GL +  +  + + +  
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVF-KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 521

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++       TY + I G CK    + A R++  M ++G+  D   YN + D  C++G
Sbjct: 522 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 581

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + +KG  L  V+Y  L+ G  + G  + A ++ E +  + C ADS T+ 
Sbjct: 582 RAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYS 638

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL+  LCK   LN+A+ IL+++   G                 EG+   A S+ N M   
Sbjct: 639 VLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 698

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    ++ + +  ++E A  L  EM R G +P VV+YN  ING   +     A
Sbjct: 699 GHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCA 758

Query: 453 YSFVKEMLEKGWKPDMITYSLLI----------------NGLCQSKKIDMALKLCCQFLQ 496
           +S +K M++   +P+  TY LL+                +G+    K+D   +L  + ++
Sbjct: 759 FSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVK 818

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P    Y+ +I G C A ++E+A  L  +M  ++  PN   Y  L+         +K
Sbjct: 819 HGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEK 878

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A     +++E   +P + SY+  + GLC       A     D L        + W IL  
Sbjct: 879 AASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILND 938

Query: 617 AVMNNG 622
            ++  G
Sbjct: 939 GLLKAG 944



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 156/606 (25%), Positives = 259/606 (42%), Gaps = 82/606 (13%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQF 116
           I + + P  +  + +I  Y K    D AL V   M         + +G    +L +K + 
Sbjct: 384 IARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRL 443

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++AK  LN ++  GL P+V  Y ++I+   K G +  AL VF      G   N   Y+ L
Sbjct: 444 KEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSL 503

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  +     +A  +  ++  E  + P V+TY  +I G CK   FD    +++ M++N 
Sbjct: 504 IYGLIQDQKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNG 562

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y      LCK+G    AE  Y  +V+ G+ +  VTY +++DGF +AG  +   
Sbjct: 563 LTPDEQAYNVLTDALCKSGR---AEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAA 619

Query: 297 ELWEVMGRKGCL------------------------------------NVVSYNILIRGL 320
            L E M  +GC                                     N+V+Y I+I  +
Sbjct: 620 ALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEM 679

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           ++ GK D A S++  +        + T+ V I+  CK G + +A  ++ E+E  G     
Sbjct: 680 IKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDV 739

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS----------- 412
                        G +  A S + RM    C+ N +T   L+  F++ S           
Sbjct: 740 VTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSG 799

Query: 413 -----KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                KL+    L + M + G +PT V+Y+++I G CK  R  EA   +  ML K   P+
Sbjct: 800 MWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 859

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y++LI   C  K  + A       ++ GF P +  Y+ LI GLC  G  + A  L+ 
Sbjct: 860 EEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFC 919

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           ++ + +   N V +  L DGL K G  D   ++ + +     R D  +Y++    +   S
Sbjct: 920 DLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEAS 979

Query: 588 RMSDAF 593
            M +++
Sbjct: 980 GMYESY 985



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 240/504 (47%), Gaps = 23/504 (4%)

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------- 110
           + +L E + C        S+I    ++    KA+ +  +M E  G   G++         
Sbjct: 484 VFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQ 542

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +F+ A R    + + GL PD  +Y  + + L KSG    A   +  + ++GV    
Sbjct: 543 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVKKGVVLTK 599

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  L+DGF K G+   A  + E++V E     +  TY+V++  LCK  + +E L + D
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNE-GCKADSHTYSVLLQALCKQKKLNEALSILD 658

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     + +   Y   I  + K G  + A+ ++ EM+ SG    A+TY   I  +C+ G
Sbjct: 659 QMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG 718

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I+E   L   M R G   +VV+YN+ I G    G +D A S  + + + +C  +  T+ 
Sbjct: 719 RIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYW 778

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEG---RLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+    K    N      + V+  G     +L     L+ RM KHG    A T +S++ 
Sbjct: 779 LLLKHFLKMSLANA-----HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIA 833

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A++LE A  L   M  K  SP    Y  LI   C ++ F +A SFV  M+E G++P
Sbjct: 834 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQP 893

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y  LI GLC     D A  L C  L+  +  +   + IL  GL  AG V+   QL 
Sbjct: 894 HLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLL 953

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFK 550
           S M+ R+C  +  TY+ + + + +
Sbjct: 954 SAMENRHCRIDSETYSMVTNNIHE 977



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 82/184 (44%), Gaps = 1/184 (0%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + L  + + GL P   +Y ++I G  K+  L  A  + D M  + +  N   Y +LI   
Sbjct: 811 QLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCC 870

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
                + +A      ++ E    P++ +Y+ +I GLC  G +D+   ++  + + +   +
Sbjct: 871 CDIKLFEKAASFVTNMI-ECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHN 929

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
              +     GL KAG+V+   ++   M      +D+ TY+ + +    A  + E +    
Sbjct: 930 EVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESYMCAP 989

Query: 301 VMGR 304
           ++G+
Sbjct: 990 LVGQ 993


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 260/535 (48%), Gaps = 21/535 (3%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N +F        + R+  +       L  KG    + +  +++ GLVK   +  A  V  
Sbjct: 48  NLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHR 107

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCK 218
           E+   G+E NV   NI+++   K G +   K       ME   +Y ++VTYN +I   C+
Sbjct: 108 EVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSE--MEGNGIYADMVTYNTLIGAYCR 165

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  +E  E+ + M     +   FTY + I+GLCK G    A+ +  EM+  G+  D  T
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++   CR     E  E++  M R+G + ++VS++ LI     N  +D+A+  +  ++
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
           +     D+  + VL++G C+NG + +A++I +E+ E G                 E  L 
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  L + M + G   + YT  +L++G  Q   +  A+ LF  M+++   P +V+YNTLI
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CKV    +A      M+ +   P+ ITY +LIN  C    +  A +L    ++KG  
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P +   N +I G C +G    A +    M  +   P+ ++YNTL++G  +  + DKA   
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            N + +E L PDII+YN+ + G C   RM +A   L   + +GI P   T+  L+
Sbjct: 526 INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 252/501 (50%), Gaps = 20/501 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F+  K FL+ +   G+  D+ +Y T+I    + G L  A  + + M ++G++ +
Sbjct: 128 LCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPS 187

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN +I+G  KKG Y RAK I   + +   + P+  TYN ++   C+   F E  E++
Sbjct: 188 LFTYNAIINGLCKKGRYARAKGILIEM-LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  ++ S I    +  +++ A   +R+M + G+  D V Y  ++ G+CR 
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  ++ + M  +GC L+V++YN ++ GL +   + +A  +++ + E+    D  T 
Sbjct: 307 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 366

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G C++G + KA+                  SL   M +   K +    N+L++GF
Sbjct: 367 TTLIHGHCQDGNMTKAL------------------SLFGTMTQRNIKPDIVAYNTLIDGF 408

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  ++E A  L+  M  +   P  ++Y  LIN  C V    EA+     M+EKG KP +
Sbjct: 409 CKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTL 468

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T + +I G C+S     A +   + + KG  PD   YN LI+G      ++ A    + 
Sbjct: 469 VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINK 528

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+K   +P+++TYN +M+G  + G   +A  +   ++E+ + PD  +Y   + G  +   
Sbjct: 529 MEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDN 588

Query: 589 MSDAFEFLNDALCRGILPTTI 609
           +++AF F ++ L RG  P  +
Sbjct: 589 LNEAFRFHDEMLQRGFAPDDV 609



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 234/466 (50%), Gaps = 20/466 (4%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  CR+   E+A   +NS+ +KGLKP +++Y  +INGL K G    A  +  EM   G+ 
Sbjct: 161 GAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLS 220

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   YN L+    ++ ++  AKEI+  + +   V P++V+++ +I    +    D+ L 
Sbjct: 221 PDTTTYNTLLVESCRRDNFSEAKEIFGEM-LRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +  MKK     D+  Y   +HG C+ GN+  A ++  EM+E G  +D + YN +++G C
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +   + +  +L++ M  +G L +  ++  LI G  ++G + +A+S++  + ++N   D  
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  LI+G CK G + K                  A+ L + M       N  T   L+N
Sbjct: 400 AYNTLIDGFCKVGEMEK------------------ASELWDGMISRKIFPNHITYGILIN 441

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            +     +  A  L+  M  KG  PT+V+ NT+I G C+     +A  F+  M+ KG  P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D I+Y+ LING  +   +D A     +  ++G  PD+  YN++++G C  G++++A  + 
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
             M ++   P+  TY  L++G     + ++A    + +L+    PD
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 232/459 (50%), Gaps = 20/459 (4%)

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           TN + +++LI  + +        E + R++       ++   N ++ GL K    +   E
Sbjct: 46  TNNLVFDLLIRTYVQARKLREGTEAF-RILRSKGYLVSINACNSLLGGLVKIDWVELAWE 104

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   + ++  E + +T    ++ LCK G  +  +    EM  +GI+ D VTYN +I  +C
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G ++E FE+   M  KG   ++ +YN +I GL + G+   A  I   +     + D+T
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  L+   C+    ++A +I  E                  M + G   +  + +SL+ 
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGE------------------MLRQGVVPDLVSFSSLIA 266

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            F +   L+ A+  F++M + G  P  V Y  L++G C+     EA     EMLE+G   
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+I Y+ ++NGLC+ K +  A KL  + +++G  PD   +  LIHG C  G +  AL L+
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M +RN  P++V YNTL+DG  K G+ +KA E+W+ ++  ++ P+ I+Y I +   CS 
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             +S+AF   +  + +GI PT +T + +++    +G S+
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 197/395 (49%), Gaps = 29/395 (7%)

Query: 8   LLNLLKAEKNPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVV---------- 55
           L+ +L    +P T     L   + R   ++ +  +F  +LR+ + P LV           
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270

Query: 56  --HVSRILELIEIQKCY--CPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI- 109
             H+ + L      K +   P++V  +V+   Y +N    +AL +   M E  GC   + 
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQ-GCVLDVI 329

Query: 110 --------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
                   LC+++    A +  + + E+G  PD Y++ T+I+G  + G++  AL++F  M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            +R ++ ++V YN LIDGF K G+  +A E+W+ ++    ++PN +TY ++IN  C  G 
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI-SRKIFPNHITYGILINAYCSVGH 448

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             E   +WD M +   +    T  + I G C++G+   A+     M+  G+  D ++YN 
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I+GF R   + + F     M ++G L ++++YN+++ G    G++ EA  +   + EK 
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
            N D +T+  LING      LN+A +  +E+ + G
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           IL  +   G  R+    +LV+ M  + C  N    + L+  ++QA KL      F+ +  
Sbjct: 18  ILRMIRRSGVSRVEVVEALVSSMCGN-CGTNNLVFDLLIRTYVQARKLREGTEAFRILRS 76

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG   ++ + N+L+ GL K++    A+   +E++  G + ++ T ++++N LC+  K D 
Sbjct: 77  KGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDD 136

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
                 +    G   D+  YN LI   C  G +E+A ++ ++M  +   P+L TYN +++
Sbjct: 137 VKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIIN 196

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G   +A  I   +L   L PD  +YN  L   C     S+A E   + L +G++P
Sbjct: 197 GLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP 256

Query: 607 TTITWHILVRAVMNN 621
             +++  L+     N
Sbjct: 257 DLVSFSSLIAVFSRN 271


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 243/478 (50%), Gaps = 36/478 (7%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+YS+  +I        L  AL+ F ++ + G    +V +N L+ G   +     A +++
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            ++       PNVVT+  ++NGLC+ GR  E + + DRM ++  + +  TY + + G+CK
Sbjct: 74  HQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128

Query: 254 AGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            G+   A  + R+M E S I  D V Y+A+IDG  + G+  +   L+  M  KG   ++V
Sbjct: 129 MGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ +I G   +GK  EA  + + +  +  + D  T   LIN L K G LN A  +L E 
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE- 247

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK---- 427
                            M   G   N  TCN+L++G   + KL++A+ +FK M +     
Sbjct: 248 -----------------MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290

Query: 428 -------GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
                  G  P V +YN LI+GL    +F EA    +EM  +G  PD +TYS +INGLC+
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D A ++      K F+P++  +N LI G C AG V+D L+L+  M +R  V N +T
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           Y TL+ G  K G+ + +L+I+  ++   + PD I+    L GL S   +  A   L +
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEE 468



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 229/458 (50%), Gaps = 36/458 (7%)

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           +  ++  +NILI  F        A   + +L  +   +P +VT+N +++GLC   R  E 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           L+++ +M K     +  T+ + ++GLC+ G V  A  +   MVE G+  + +TY  ++DG
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 286 FCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            C+ G       L   M     +  +VV Y+ +I GL ++G+  +A +++  +++K    
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  +ING C +G  ++A ++L E+             LV ++       +  T + 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEM-------------LVRKISP-----DVVTFSG 227

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK- 462
           L+N  ++   L +A  L +EM   G  P VV+ NTL++GLC   +  +A    K M +  
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 463 ----------GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                     G +PD+ TY++LI+GL    K   A +L  +   +G  PD   Y+ +I+G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   ++++A Q++ +M  ++  PN+VT+NTL+ G  K G  D  LE++  +    +  +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            I+Y   ++G      ++ + +   + +  G+ P TIT
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 211/408 (51%), Gaps = 12/408 (2%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L+ +  KP+V ++ T++NGL + G ++ A+A+ D M E G++ N + Y  ++DG  K GD
Sbjct: 72  LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            + A  +  ++   + + P+VV Y+ +I+GL K GR  +   ++  M+      D  TY 
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I+G C +G    A+R+ +EM+   I  D VT++ +I+   + G +    +L + M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G C NVV+ N L+ GL ++GK+ +A+ +++ +++   + D+ TH    NG      +   
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA-THA--FNG------VEPD 302

Query: 365 IQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +Q  N +  G   EG+  +A  L   M   G   +  T +S++NG  + S+L+ A  +F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M  K  SP +V++NTLI G CK     +      EM  +G   + ITY  LI G  +  
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            I+ +L +  + +  G  PD      ++ GL S  +++ AL +   ++
Sbjct: 423 NINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 34/408 (8%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D +++   I   C    +  A   + ++ + G     VT+N ++ G C   ++ E  +L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
             M +    NVV++  L+ GL   G+V EA+++ + + E     +  T+G +++G+CK G
Sbjct: 74  HQMCKP---NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 360 YLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTC 401
               A+ +L ++EE                    +GR  DA +L   M   G   +  T 
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + ++NGF  + K   A  L +EM  +  SP VV+++ LIN L K      A   ++EM+ 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK------------GFTPDVTMYNIL 509
            G  P+++T + L++GLC S K+  AL++  + +QK            G  PDV  YNIL
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMF-KAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GL + GK  +A +LY  M  R  VP+ VTY+++++GL K    D+A ++++ +  +  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            P+I+++N  + G C    + D  E   +   RGI+   IT+  L+R 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 21/391 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L+N L  E     A+AL D    E G   +   +  I+  +      V    +L
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMV-EDGLQPNQITYGTIVDGMCKMGDTVSALNLL 139

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
             +E      P+ V  S +I    K+     A ++F  M +         + C     C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             ++ +A+R L  +  + + PDV ++  +IN LVK GDL  A  +  EM   GV  NVV 
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 173 YNILIDGFFKKGDYMRAKEIW---ERLVME-------TSVYPNVVTYNVMINGLCKCGRF 222
            N L+DG    G    A E++   ++ +M+         V P+V TYN++I+GL   G+F
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  E+++ M       D+ TY S I+GLCK   ++ A +++  M       + VT+N +
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G+C+AG + +  EL+  MGR+G + N ++Y  LIRG  + G ++ ++ I++ +     
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
             D+ T   ++ GL     L KA+ +L E++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score = 45.4 bits (106), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 80/213 (37%), Gaps = 44/213 (20%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS-- 58
           M I A    N    E +  T   L      E  +  +  L+  +  R I P  V + S  
Sbjct: 288 MDIDATHAFN--GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 59  -------RILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
                  R+ E  ++      K + P  V   ++I  Y K  M D  L++F        C
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF--------C 397

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           E G                    +G+  +  +Y T+I G  K G++ G+L +F EM   G
Sbjct: 398 EMG-------------------RRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           V  + +    ++ G + K +  +A  + E L M
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKKALAMLEELQM 471


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 243/478 (50%), Gaps = 36/478 (7%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+YS+  +I        L  AL+ F ++ + G    +V +N L+ G   +     A +++
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            ++       PNVVT+  ++NGLC+ GR  E + + DRM ++  + +  TY + + G+CK
Sbjct: 74  HQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128

Query: 254 AGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            G+   A  + R+M E S I  D V Y+A+IDG  + G+  +   L+  M  KG   ++V
Sbjct: 129 MGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ +I G   +GK  EA  + + +  +  + D  T   LIN L K G LN A  +L E 
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE- 247

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK---- 427
                            M   G   N  TCN+L++G   + KL++A+ +FK M +     
Sbjct: 248 -----------------MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290

Query: 428 -------GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
                  G  P V +YN LI+GL    +F EA    +EM  +G  PD +TYS +INGLC+
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D A ++      K F+P++  +N LI G C AG V+D L+L+  M +R  V N +T
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           Y TL+ G  K G+ + +L+I+  ++   + PD I+    L GL S   +  A   L +
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEE 468



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 229/458 (50%), Gaps = 36/458 (7%)

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           +  ++  +NILI  F        A   + +L  +   +P +VT+N +++GLC   R  E 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           L+++ +M K     +  T+ + ++GLC+ G V  A  +   MVE G+  + +TY  ++DG
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 286 FCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            C+ G       L   M     +  +VV Y+ +I GL ++G+  +A +++  +++K    
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  +ING C +G  ++A ++L E+             LV ++       +  T + 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEM-------------LVRKISP-----DVVTFSG 227

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK- 462
           L+N  ++   L +A  L +EM   G  P VV+ NTL++GLC   +  +A    K M +  
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 463 ----------GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                     G +PD+ TY++LI+GL    K   A +L  +   +G  PD   Y+ +I+G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   ++++A Q++ +M  ++  PN+VT+NTL+ G  K G  D  LE++  +    +  +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            I+Y   ++G      ++ + +   + +  G+ P TIT
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 211/408 (51%), Gaps = 12/408 (2%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L+ +  KP+V ++ T++NGL + G ++ A+A+ D M E G++ N + Y  ++DG  K GD
Sbjct: 72  LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            + A  +  ++   + + P+VV Y+ +I+GL K GR  +   ++  M+      D  TY 
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I+G C +G    A+R+ +EM+   I  D VT++ +I+   + G +    +L + M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G C NVV+ N L+ GL ++GK+ +A+ +++ +++   + D+ TH    NG      +   
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA-THA--FNG------VEPD 302

Query: 365 IQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +Q  N +  G   EG+  +A  L   M   G   +  T +S++NG  + S+L+ A  +F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M  K  SP +V++NTLI G CK     +      EM  +G   + ITY  LI G  +  
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            I+ +L +  + +  G  PD      ++ GL S  +++ AL +   ++
Sbjct: 423 NINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 34/408 (8%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D +++   I   C    +  A   + ++ + G     VT+N ++ G C   ++ E  +L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
             M +    NVV++  L+ GL   G+V EA+++ + + E     +  T+G +++G+CK G
Sbjct: 74  HQMCKP---NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 360 YLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTC 401
               A+ +L ++EE                    +GR  DA +L   M   G   +  T 
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + ++NGF  + K   A  L +EM  +  SP VV+++ LIN L K      A   ++EM+ 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK------------GFTPDVTMYNIL 509
            G  P+++T + L++GLC S K+  AL++  + +QK            G  PDV  YNIL
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMF-KAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GL + GK  +A +LY  M  R  VP+ VTY+++++GL K    D+A ++++ +  +  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            P+I+++N  + G C    + D  E   +   RGI+   IT+  L+R 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 188/391 (48%), Gaps = 21/391 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L+N L  E     A+AL D    E G   +   +  I+  +      V    +L
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMV-EDGLQPNQITYGTIVDGMCKMGDTVSALNLL 139

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
             +E      P+ V  S +I    K+     A ++F  M +         + C     C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             ++ +A+R L  +  + + PDV ++  +IN LVK GDL  A  +  EM   GV  NVV 
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 173 YNILIDGFFKKGDYMRAKEIW---ERLVME-------TSVYPNVVTYNVMINGLCKCGRF 222
            N L+DG    G    A E++   ++ +M+         V P+V TYN++I+GL   G+F
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  E+++ M       D+ TY S I+GLCK   ++ A +++  M       + VT+N +
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G+C+AG + +  EL+  MGR+G + N ++Y  LIRG  + G ++ ++ I++ +     
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
             D+ T   ++ GL     L +A+ +L E++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 44/213 (20%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS-- 58
           M I A    N    E +  T   L      E  +  +  L+  +  R I P  V + S  
Sbjct: 288 MDIDATHAFN--GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 59  -------RILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
                  R+ E  ++      K + P  V   ++I  Y K  M D  L++F        C
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF--------C 397

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           E G                    +G+  +  +Y T+I G  K G++ G+L +F EM   G
Sbjct: 398 EMG-------------------RRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           V  + +    ++ G + K +  RA  + E L M
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKRALAMLEELQM 471


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 261/566 (46%), Gaps = 54/566 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + + + +  + +   G+ PDVY + T++N     G +  A+ +F +M + GV  N
Sbjct: 172 LVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPN 231

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I G  K G    A +  E++  E  V P++VTY V+INGL K  RFDE   + 
Sbjct: 232 VVTYNNIIHGLCKNGRLDEAFQFKEKMEKE-RVKPSLVTYGVLINGLVKLERFDEANCIL 290

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       ++  Y + I G C+ GN+  A ++  +M+ +GI  ++VT N++I G+C++
Sbjct: 291 KEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKS 350

Query: 290 GKIKECFELWEVMGRKG---------------CL---------------------NVVSY 313
            +++    L E M   G               CL                     N    
Sbjct: 351 NQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLL 410

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            +L+ GL +NGK  EAI +W  L EK   A++ T   LI+GLC+ G   +A ++L E+ E
Sbjct: 411 TLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 EG++ +   L   M + G + + YT N L++G     K+E 
Sbjct: 471 RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L+ E  + G  P   +Y  +I+G CK  R  E     +EM+    + + + Y  LI 
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C++  +  A +L      +G       Y+ LIHGL + G V+ A QL   M+K    P
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+V Y  L+ G  K G   K   I   +    + P+ I+Y I + G C    M  A + L
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLL 710

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           N+   +GI+P  +T++ L       G
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEG 736



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 264/533 (49%), Gaps = 60/533 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I    KN   D+A    ++M +         +G     L +  +F++A   L  + ++
Sbjct: 237 NIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDR 296

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+   Y T+I+G  + G++  AL + D+M   G+  N V  N LI G+ K      A
Sbjct: 297 GYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHA 356

Query: 190 KEIWERL-------------------------------VMET---SVYPNVVTYNVMING 215
           + + E +                               +ME    +  PN     ++++G
Sbjct: 357 EHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG 416

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC+ G+  E +E+W R+ +     ++ T  + IHGLC+AG+ E A ++ +EM+E G+ +D
Sbjct: 417 LCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLD 476

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
           +++YN +I   C+ GK++E F+L E M R+G   ++ +YN+L+ GL   GK++EA  +W 
Sbjct: 477 SISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWH 536

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-----VEEGG------------EG 377
             ++     D+ T+G++I+G CK   + +  ++  E     +E+               G
Sbjct: 537 ECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENG 596

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            + +A  L + M   G    + T +SL++G      +++A  L  EM ++G SP VV Y 
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI G CK+ +  +  S ++EM      P+ ITY+++ING C+   +  A KL  +  QK
Sbjct: 657 ALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           G  PD   YN L +G C  GK+E+AL++   M       + +TY TL+DG  K
Sbjct: 717 GIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 256/545 (46%), Gaps = 54/545 (9%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  KGL P + +   +++ LVK+ ++  +  VFD M   GV  +V  ++ +++ F   G 
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A E++ ++  +  V PNVVTYN +I+GLCK GR DE  +  ++M+K   +    TY 
Sbjct: 213 VDDAIELFRKM-EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYG 271

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I+GL K    + A  + +EM + G   + V YN +IDG+CR G I    ++ + M   
Sbjct: 272 VLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISN 331

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   N V+ N LI+G  ++ +++ A  + E +       +  T   +I+ LC     + A
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391

Query: 365 IQILNEV-------EEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  + E+        +G            G+ ++A  L  R+ + G   N  T N+L++G
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A   E A  L KEM  +G     +SYNTLI   CK  +  E +   +EM+ +G +PD
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE------- 520
           M TY++L++GLC   KI+ A  L  +  + G  PD   Y I+I G C A +VE       
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 521 ----------------------------DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
                                       +A +L  +M+ R       TY++L+ GL   G
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D A ++ + + +E L P+++ Y   + G C   +M      L +     + P  IT+ 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 613 ILVRA 617
           I++  
Sbjct: 692 IMING 696



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 19/484 (3%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +F  +  +G+  ++   N L+    K  +   + ++++ ++    V P+V  ++ M+N  
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFD-IMCHCGVTPDVYLFSTMVNAF 207

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C  GR D+ +E++ +M+K     +  TY + IHGLCK G ++ A +   +M +  +    
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
           VTY  +I+G  +  +  E   + + M  +G   N V YN LI G    G +  A+ I + 
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           +     + +S T   LI G CK+  +  A  +L E+  GG                 + R
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
              A   +  M     K N      L++G  Q  K   AI L+  +  KG +   V+ N 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+GLC+     EA   +KEMLE+G   D I+Y+ LI   C+  K++   KL  + +++G
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+  YN+L+HGLC+ GK+E+A  L+   KK    P+  TY  ++DG  K    ++  
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +++  ++  ++  + + Y   ++  C    M +AF   +D   RGI  T+ T+  L+  +
Sbjct: 568 KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627

Query: 619 MNNG 622
            N G
Sbjct: 628 SNIG 631



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 56/364 (15%)

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           FEL+ ++  KG   ++ + N L+  L++  +V  +  +++++       D      ++N 
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C  G                  R+ DA  L  +M+K G   N  T N++++G  +  +L
Sbjct: 207 FCTGG------------------RVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRL 248

Query: 415 ENAIFLFKE-MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           + A F FKE M ++   P++V+Y  LINGL K+ERF EA   +KEM ++G+ P+ + Y+ 
Sbjct: 249 DEA-FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-- 531
           LI+G C+   I  AL++    +  G +P+    N LI G C + ++E A  L   M    
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367

Query: 532 ---------------------------------RNCVPNLVTYNTLMDGLFKTGDCDKAL 558
                                            RN  PN      L+ GL + G   +A+
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAI 427

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E+W  +LE+    + ++ N  + GLC      +A + L + L RG++  +I+++ L+ A 
Sbjct: 428 ELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILAC 487

Query: 619 MNNG 622
              G
Sbjct: 488 CKEG 491



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 93/167 (55%)

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           FG  +     +  KG  P + T + L++ L ++ ++ M+ ++       G TPDV +++ 
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +++  C+ G+V+DA++L+  M+K    PN+VTYN ++ GL K G  D+A +    + +ER
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++P +++Y + + GL    R  +A   L +   RG  P  + ++ L+
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 1/145 (0%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A + L+ + ++GL P+V  Y  +I G  K G +    ++  EM    V  N + Y I+
Sbjct: 634 DSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+G  K G+   A ++   +  +  + P+ VTYN + NG CK G+ +E L++ D M    
Sbjct: 694 INGHCKLGNMKAAAKLLNEMA-QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAE 261
              D  TY + I G  K   V   E
Sbjct: 753 ISLDDITYTTLIDGWHKPLTVSSRE 777


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 257/558 (46%), Gaps = 54/558 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR      A    + +  +GL  DV  Y T++ G  ++G +  A  V D M E GV+ NV
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y   I  + +      A +++E +V    V  +VVT + ++ GLC+ GRF E   ++ 
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K     +  TYC+ I  L KAG  +    +  EMV  G+ +D VTY A++D   + G
Sbjct: 299 EMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 291 KIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K  E  + L   +     LN V+Y +LI  L +   VDEA  +   + EK+ + +  T  
Sbjct: 359 KTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            +ING  K G L+KA +    ++E G        G L D          A  + + M   
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G ++N +  +SL+NG  Q  K+E A+ LFK+ S  G S   V+Y TLI+GL K      A
Sbjct: 479 GVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           + F +E++++   PD + Y++ IN LC   K   A  +  +    G  PD + YN +I  
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVS 598

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP- 571
            C  G+   AL+L   MK  +  PNL+TYNTL+ GLF TG  +KA  + N ++     P 
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658

Query: 572 ----------------------------------DIISYNITLKGLCSCSRMSDAFEFLN 597
                                             DI  YN  L+ LC       A   L 
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE 718

Query: 598 DALCRGILPTTITWHILV 615
           + L  GI P TIT++ L+
Sbjct: 719 EMLGSGIAPDTITFNALI 736



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 258/524 (49%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + ++ K  L       L  +  +Y  +I+ L K+ ++  A  V  EM E+ +  N
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ +I+GF K+G   +A E ++R++ E  + PNVVTY  +I+G  K    D  LE++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     E + F   S ++GL + G +E A  ++++   SG+ +D V Y  +IDG  +A
Sbjct: 473 HDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F+   E+M R    + V YN+ I  L   GK  EA SI   +R      D +T+
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             +I   C+ G   KA+++L+E++                   G G +  A  L+N M  
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   ++ T   ++    Q+ +L+  + + + M   G    +  YNTL+  LC      +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++EML  G  PD IT++ LI G C+S  +D A     Q L +  +P++  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL S G++ +A  +   M+K    PN +TY+ L+ G  K  +  +A+ ++  ++ +   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + +YN  +        M+ A E   D   RG+ PT+ T+ ILV
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 258/547 (47%), Gaps = 62/547 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR  Q + A     +L ++G      DV  + T+I G  + GD   AL+V D M  +G+
Sbjct: 145 LCRNGQVDAAA----ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV YN L+ GF + G    A+ + + ++ E  V PNV TY   I   C+    +E  
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLD-MMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++++ M +N    D  T  + + GLC+ G    A  ++REM + G   + VTY  +ID  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSL 319

Query: 287 CRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            +AG+ KE   L  E++ R   +++V+Y  L+  L + GK DE           N + + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNG 379

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ VLI+ LCK   +++A Q+L E+EE                       N  T +S++
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEE------------------KSISPNVVTFSSVI 421

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE------------------ 447
           NGF++   L+ A    + M  +G +P VV+Y TLI+G  K +                  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVE 481

Query: 448 -----------------RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
                            +  EA +  K+    G   D + Y+ LI+GL ++  +  A K 
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + + +   PD  +YN+ I+ LC  GK ++A  + + M+     P+  TYNT++    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G+  KAL++ + +    ++P++I+YN  + GL     +  A   LN+ +  G  P+++T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 611 WHILVRA 617
              +++A
Sbjct: 662 HRRVLQA 668



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 249/524 (47%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F +A      + + G  P+  +Y T+I+ L K+G     L++  EM  RGV  +
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  L+D   K+G     K+   R  +  ++  N VTY V+I+ LCK    DE  ++ 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTL-RFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     +  T+ S I+G  K G ++ A    R M E GI  + VTY  +IDGF + 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
                  E++  M  +G  +N    + L+ GL +NGK++EA+++++       + D   +
Sbjct: 463 QGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GL K G +  A +   E+ +                    G+  +A S++  M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +  T N+++    +  +   A+ L  EM      P +++YNTL+ GL       +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + EM+  G+ P  +T+  ++    QS+++D+ L +    +  G   D+T+YN L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G    A  +   M      P+ +T+N L+ G  K+   D A   +  +L + + P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +I ++N  L GL S  R+ +A   L +    G+ P  +T+ ILV
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILV 806



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 233/492 (47%), Gaps = 56/492 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A++ L  + EK + P+V ++ +VING VK G L  A      M ERG+  N
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LIDGFFK      A E++  ++ E  V  N    + ++NGL + G+ +E + ++
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCE-GVEVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
                +    D   Y + I GL KAG++  A +  +E+++  +  DAV YN  I+  C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCIL 567

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE   +   M   G   +  +YN +I      G+  +A+ +   ++  +   +  T+
Sbjct: 568 GKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLADAASLVNRMD----------- 390
             L+ GL   G + KA  +LNE+   G         R+  A S   R+D           
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 391 ----------------------------------KHGCKLNAYTCNSLMNGFIQASKLEN 416
                                               G   +  T N+L+ G  ++S L+N
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A   + +M  +  SP + ++NTL+ GL  V R GEA + + EM + G +P+ +TY +L+ 
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVT 807

Query: 477 GLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           G   QS K++ A++L C+ + KGF P V+ YN LI     AG +  A +L+ +M+KR   
Sbjct: 808 GHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVH 866

Query: 536 PNLVTYNTLMDG 547
           P   TY+ L+ G
Sbjct: 867 PTSCTYDILVSG 878



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 17/380 (4%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRG 319
           A  V  EM + G+  D VT N ++ G CR G++     L +  G    L+V+ +N LI G
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
               G    A+S+ + +  +    D   +  L+ G C+ G ++ A  +L+ ++E G    
Sbjct: 179 YCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                           + +A  L   M ++G  L+  T ++L+ G  +  +   A  LF+
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM + G  P  V+Y TLI+ L K  R  E  S + EM+ +G   D++TY+ L++ L +  
Sbjct: 299 EMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K D         L    + +   Y +LI  LC A  V++A Q+   M++++  PN+VT++
Sbjct: 359 KTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           ++++G  K G  DKA E    + E  + P++++Y   + G         A E  +D LC 
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+         LV  +  NG
Sbjct: 479 GVEVNKFIVDSLVNGLRQNG 498



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 211/480 (43%), Gaps = 27/480 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  + K    D AL+V+  M          I       L +  + E+A          
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL  D  +Y T+I+GL K+GD+  A     E+ +R +  + V YN+ I+     G +  A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEA 573

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K I   +     + P+  TYN MI   C+ G   + L++   MK +  + +  TY + + 
Sbjct: 574 KSILTEM-RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GL   G VE A+ +  EMV +G    ++T+  ++    ++ ++    ++ E M   G   
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA---- 364
           ++  YN L++ L  +G   +A  + E +       D+ T   LI G CK+ +L+ A    
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752

Query: 365 -----------IQILNEVEEGGE--GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
                      I   N +  G E  GR+ +A +++  M+K G + N  T + L+ G  + 
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQ 812

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           S    A+ L+ EM  KG  P V +YN LI+   K     +A    K+M ++G  P   TY
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +L++G  + +      K      +KGF+P     + +       G    A +L  N+ +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 34/273 (12%)

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL------------------- 420
           A A +++  M K G   +  T N+L+ G  +  +++ A  L                   
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176

Query: 421 ---------------FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
                             M+ +G    VV YNTL+ G C+  +   A   +  M E G  
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ TY+  I   C++K ++ A  L    ++ G   DV   + L+ GLC  G+  +A  L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M K   VPN VTY TL+D L K G   + L +   ++   +  D+++Y   +  L  
Sbjct: 297 FREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +  +  + L  AL   +    +T+ +L+ A+
Sbjct: 357 QGKTDEVKDTLRFALSDNLSLNGVTYTVLIDAL 389


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 250/521 (47%), Gaps = 45/521 (8%)

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK---------AKRF 122
           P     +++ A+       +A++ F RM + F C          F+          A   
Sbjct: 143 PSAAFRALVLAHSSAGRHQEAVEAFSRMGD-FDCRPTAFVYNAVFQVLVDRGVILLALAL 201

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            N +   G  P+  +Y  +++GL K G  + AL +FDEM ERG+  +V  Y +L+     
Sbjct: 202 YNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCN 261

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           +G    A  +   +  E    P+ VTY V ++GLCK GR DE    ++ ++         
Sbjct: 262 EGRIEDAGRLLCSM-KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
            Y   I GL +AG  +     Y EM+   I  D   Y  +I  F  AG+ K+ F L + M
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG + +   YN L++ L + G +D A S+   + + N   DSTTH ++I GLCK G +
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLI 440

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           +KA+Q+ +E                  M +HGC     T N+L++G  +A  LE A  LF
Sbjct: 441 DKAMQVFDE------------------MGEHGCHPTVMTYNALIDGLYRAGMLEEARMLF 482

Query: 422 KEMSRKGCSPTVV--------------SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +M   G +P++               S   L++G+C+  +  +AY  ++ ++E G  PD
Sbjct: 483 HKME-MGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+ LINGLC++K +D AL+L  +   KG +PD   Y  LI GL  A +  DA  L+ 
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           N+ +    P+L  YNT+M  L +     +A+ +W   L ++
Sbjct: 602 NILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKK 642



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 34/503 (6%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL     ++  ++     +G    A+  F  M +         YN +      +G  + A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ R+V  +   PN  TY V+++GLCK G   + L+M+D M +     D   Y   + 
Sbjct: 199 LALYNRMV-SSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLS 257

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
            LC  G +E A R+   M E+G   D VTY   + G C+AG++ E F  +E++   G  L
Sbjct: 258 SLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTL 317

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            ++ Y+ LI GL + G+ DE +S +  +  K+ + D T + +LI    + G    A  +L
Sbjct: 318 GLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLL 377

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +E+++ G                  G +  A SL++ M ++   L++ T N ++ G  + 
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI-- 469
             ++ A+ +F EM   GC PTV++YN LI+GL +     EA     +M E G  P +   
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLR 496

Query: 470 ----------TYSL--LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
                     T SL  L++G+CQS ++  A KL    ++ G  PDV  YN LI+GLC A 
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            ++ AL+L+  ++ +   P+ +TY TL+DGL++    + A  ++ +IL     P +  YN
Sbjct: 557 NLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYN 616

Query: 578 ITLKGLCSCSRMSDAFEFLNDAL 600
             ++ LC   ++S A     D L
Sbjct: 617 TMMRSLCRMKKLSQAINLWLDYL 639



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 151/614 (24%), Positives = 277/614 (45%), Gaps = 77/614 (12%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           +  +++ + + L+D  +++    +   +    C       + ++    K  M   AL +F
Sbjct: 178 TAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMF 237

Query: 97  QRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
             M E        I+      LC + + E A R L S+ E G  PD  +Y   ++GL K+
Sbjct: 238 DEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA 297

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G +  A   F+ + + G    ++ Y+ LIDG F+ G +      +  + +  S+ P++  
Sbjct: 298 GRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEM-LGKSISPDITL 356

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y ++I    + GR  +   + D MK      D+F Y + +  L   GN++ A+ +  EM+
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
           ++ + +D+ T+N MI G C+ G I +  ++++ MG  GC   V++YN LI GL   G ++
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 328 EAISIWELLREKNCNA-------------DSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           EA  ++  +   N  +             D+ +   L++G+C++G + KA ++L  + E 
Sbjct: 477 EARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIES 536

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
           G                     +  T N+L+NG  +A  L+ A+ LFKE+  KG SP  +
Sbjct: 537 G------------------VVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEI 578

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y TLI+GL +  R  +A    + +L  G  P +  Y+ ++  LC+ KK+  A+ L   +
Sbjct: 579 TYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDY 638

Query: 495 LQKGF--TP-----------------DVTM-----------------YNILIHGLCSAGK 518
           L K +  +P                 D T+                 Y I + GLC   K
Sbjct: 639 LPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRK 698

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++DAL+++  +++   V        L++ L    + + A++I  + L +R        N 
Sbjct: 699 IDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNR 758

Query: 579 TLKGLCSCSRMSDA 592
            L+ LC   R  DA
Sbjct: 759 LLRSLCIRYRRHDA 772



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 176/354 (49%), Gaps = 19/354 (5%)

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
           +G+   +  + A++     AG+ +E  E +  MG   C      YN + + L++ G +  
Sbjct: 138 AGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILL 197

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A++++  +    C  +STT+ VL++GLCK G    A+++ +E+ E   G + D       
Sbjct: 198 ALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLE--RGIVPD------- 248

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
                  +  YT   L++      ++E+A  L   M   GC P  V+Y   ++GLCK  R
Sbjct: 249 -------VKIYTV--LLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGR 299

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA+   + + + G+   +I YS LI+GL Q+ + D  L    + L K  +PD+T+Y I
Sbjct: 300 VDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTI 359

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI     AG+ +DA  L   MK +  VP+   YNTL+  LF  G+ D+A  + + +L+  
Sbjct: 360 LIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  D  ++NI + GLC    +  A +  ++    G  PT +T++ L+  +   G
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAG 473



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 190/430 (44%), Gaps = 39/430 (9%)

Query: 114 RQFEKAKR------FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           R+F +A R       L+ + +KG  PD + Y T++  L   G++  A ++  EM +  V 
Sbjct: 362 RRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVV 421

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   +NI+I G  KKG   +A ++++ +  E   +P V+TYN +I+GL + G  +E   
Sbjct: 422 LDSTTHNIMICGLCKKGLIDKAMQVFDEM-GEHGCHPTVMTYNALIDGLYRAGMLEEARM 480

Query: 228 MWDRMKKNE-------------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           ++ +M+                + +D+ +    + G+C++G V  A ++ R ++ESG+  
Sbjct: 481 LFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVP 540

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
           D VTYN +I+G C+A  +     L++ +  KG   + ++Y  LI GL    + ++A  ++
Sbjct: 541 DVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLF 600

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ------------------ILNEVEEGG 375
           + +           +  ++  LC+   L++AI                   I N  +   
Sbjct: 601 QNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFE 660

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           +G L +    + ++D+    LN       + G  Q  K+++A+ +F  +   G   T   
Sbjct: 661 DGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPAC 720

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
              LIN LC       A   +   L K +       + L+  LC   +   A  L  +  
Sbjct: 721 CALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMH 780

Query: 496 QKGFTPDVTM 505
             G+  DV +
Sbjct: 781 LVGYDMDVYL 790


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 267/524 (50%), Gaps = 25/524 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM-FERGVETNVVCYNIL 176
           +A +   ++ + G KPD   Y  ++    K  +L  A  +F EM  E     N V +   
Sbjct: 252 EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAF 311

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           + G  K G   +A E      M+ S+  +   Y+++I  L + GR D+  E    +    
Sbjct: 312 LSGLCKSGKIEQAFEACR--TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRN 369

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            +  S T  S I  LCKAG V+ A  +   M++ G   D  T++ +I+  C+A KI+E  
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429

Query: 297 ELWEVMGRK---GCLNVVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHGVLI 352
           E  + M RK      +  SYN L+  L +  KV +A +I+  ++ E++   D  ++ +LI
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           +G CK   L +A ++  ++ +                   +GR+ADA  +   M   GC 
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T ++L++GF  A K + A  LF+ M  +GC P  V+YN L++GLCK  +  EA+  
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            ++M+E+G  PD +TY+ L+ G C   KI+ A+++  + + KG  PDV  YN L+ G   
Sbjct: 610 FRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 669

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDII 574
           AGK  +A QL+  M  R C P+ V++N ++DGL K    D A+E++  + ++    PD++
Sbjct: 670 AGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 729

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +YN  + GLC   R+S+A +   +     + P    +++L+ A+
Sbjct: 730 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 250/515 (48%), Gaps = 21/515 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +R  ++A RF   + +KG KP    Y  V   L  +G       VF    E+ V   +
Sbjct: 175 CYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEM 234

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +    L+  F  +   + A +++ R ++++   P+   Y+ M+   CK    DE  +++ 
Sbjct: 235 MLKKALLVNFVIQDKAIEASKLF-RAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFL 293

Query: 231 RMKKNEREK-DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            M    +   ++  + +F+ GLCK+G +E A    R M ES +      Y+ +I     +
Sbjct: 294 EMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIES 352

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I +  E   E+ GR    +  + + +I+ L + G+VD A+S+ E + ++    D  TH
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 412

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LCK   + +A + L  ++               ++        +Y  NSL+N  
Sbjct: 413 SMLINELCKADKIQEAQEFLQGMD--------------RKISSRSSSCFSY--NSLLNSL 456

Query: 409 IQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +A K+  A  +F  M S +   P VVSY+ LI+G CK++  G A    K+M++    P+
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           + TY+  +NGL +  +I  A  +  + +  G +PDV  Y+ LIHG   A K + A +L+ 
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFE 576

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  R C PN VTYN L+ GL K    D+A E++  ++E    PD ++Y   L G C+  
Sbjct: 577 TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++  A E  ++ + +G  P  + ++ L++     G
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 233/445 (52%), Gaps = 24/445 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L    + +KA+     +  + ++P   +  +VI  L K+G +  AL++ + M +RG   
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLE 227
           ++  +++LI+   K      A+E  + +  + +S   +  +YN ++N LCK  +  +   
Sbjct: 408 DMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFA 467

Query: 228 MWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           ++  M  +ER    D  +Y   I G CK   +  AE++Y++M++     +  TYNA ++G
Sbjct: 468 IFSTMV-SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 526

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
             R G+I +   ++E M   GC  +V++Y+ LI G     K D+A  ++E +  + C  +
Sbjct: 527 LMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPN 586

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + T+  L++GLCK                  E +  +A  L  +M + GC  +  T  +L
Sbjct: 587 AVTYNCLLHGLCK------------------ESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + GF    K+E A+ +F EM  KG  P VV+YN L+ G  +  + GEA    + M+ +  
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKVEDAL 523
           KPD ++++++I+GL ++K++D A+++  +  Q  G +PD+  YN LI GLC   ++ +A+
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGL 548
           +++  + +    P+   +N L++ +
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 218/434 (50%), Gaps = 41/434 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A   L ++ ++G  PD+ ++  +IN L K+  +  A     + F +G++  
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA-----QEFLQGMDRK 438

Query: 170 VVC-------YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           +         YN L++   K     +A  I+  +V E S  P+VV+Y+++I+G CK    
Sbjct: 439 ISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDEL 498

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
               +++ +M       +  TY +F++GL + G +  A+ VY EMV +G   D +TY+ +
Sbjct: 499 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTL 558

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GF  A K  +  EL+E M  +GC  N V+YN L+ GL +  K DEA  ++  + E+ C
Sbjct: 559 IHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 618

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAAS 384
           + D  T+  L+ G C  G + +A+++ +E+   G                  G+  +A  
Sbjct: 619 DPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQ 678

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGL 443
           L   M    CK +  + N +++G  +A +L++A+ +F+ M +  GCSP +V+YN+LI GL
Sbjct: 679 LFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C  +R  EA    KE+      PD   +++L+  +    K  +  +   +F       D 
Sbjct: 739 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI----KCGIVYQFEIRF------KDP 788

Query: 504 TMYNILIHGLCSAG 517
             +N+L+  + +AG
Sbjct: 789 PAFNVLMEAMHAAG 802



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 120/226 (53%), Gaps = 12/226 (5%)

Query: 71  CPEDVAL--SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAK 120
           C  DV    ++I  +      D+A ++F+ M       N + + C    LC++ + ++A 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                + E+G  PD  +Y T++ G    G +  A+ VFDEM  +G + +VV YN L+ GF
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EK 239
           F+ G    AK++++ +V      P+ V++N+MI+GL K  R D+ +E+++RM+++     
Sbjct: 668 FRAGKPGEAKQLFQVMV-SRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           D  TY S I GLC    +  A +V++E+    +  D   +N +++ 
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 44/293 (15%)

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++  + +GGE     A +    +     K + +T N L++  I+   L+ A  +F++M  
Sbjct: 103 VIKHLRDGGE-----ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA 157

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD------------------- 467
           +G  P   +Y  L+   C      EA  F  EM++KG+KP                    
Sbjct: 158 QGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGE 217

Query: 468 -----------------MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
                            M+  +LL+N + Q K I+ A KL    ++ G  PD T+Y+ ++
Sbjct: 218 FSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYMV 276

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVP-NLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
              C    +++A +L+  M   +  P N V +   + GL K+G  ++A E     ++E L
Sbjct: 277 LAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC-RTMQESL 335

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 Y++ ++ L    R+  A E   +   R I P++ T H +++ +   G
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG 388


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 269/546 (49%), Gaps = 34/546 (6%)

Query: 91  KALDVF-QRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE---KGLKPDVYS 137
           +A+D+  +RM E+ GC   ++         C +++ E+A   L+ + +   +   P+V S
Sbjct: 147 EAMDILVKRMPEL-GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  VING    G +  A  +F EM +RG++ NVV Y  +IDG  K     RA+ ++++++
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V P+  TYN +I+G    G++ E + M + M  +  + D +TY S ++ LC  G  
Sbjct: 266 -DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A  ++  M+  GI  +   Y  +I G+   G + E  +L  +M   G   +   +NI+
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
                +   +DEA+ I+  ++++  + D   +G LI+ LCK                   
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK------------------L 426

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ DA    N+M   G   N +  NSL+ G     K E A   + EM  +G  P VV +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT++  LC   +  +A   +  M   G +P +I+Y+ LI G C   +ID A K     L 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PD   YN L+HG C AG+++DA  ++  M +    P +VTY+T++ GLF T    +
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A E++ +++    + +I  YNI L GL   + + +AF+       +       T++I++ 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 617 AVMNNG 622
           A+  +G
Sbjct: 667 ALFKSG 672



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 254/518 (49%), Gaps = 28/518 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGV 166
           G  CR  + E        + + G + +      ++ GL  +  L  A+ +    M E G 
Sbjct: 102 GCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGC 161

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-----SVYPNVVTYNVMINGLCKCGR 221
             +VV YN L+ GF  +    RA+E  E L M       S  PNVV+Y ++ING    G+
Sbjct: 162 TPDVVSYNTLLKGFCNEK---RAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQ 218

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            D+   ++  M     + +  TY + I GLCKA  V+ AE V+++M++ G+  D  TYN 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I G+   GK KE   + E M   G   +  +Y  L+  L  NG+  EA  +++ +  K 
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG 338

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              +   +G+LI+G     Y  K             G L++   L+N M ++G   + + 
Sbjct: 339 IKPNVAIYGILIHG-----YATK-------------GALSEMHDLLNLMVENGLSPDHHI 380

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N +   + + + ++ A+ +F +M ++G SP VV+Y  LI+ LCK+ R  +A     +M+
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            +G  P++  ++ L+ GLC   K + A +   + L +G  PDV  +N ++  LC+ G+V 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A +L   M++    P +++Y TL+ G    G  D+A +  + +L   L+PD  +YN  L
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            G C   R+ DA+    + L  GI P  +T+  ++  +
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 264/528 (50%), Gaps = 28/528 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +VI    K  + D+A  VFQ+M        N+ + C         ++++  R L  +   
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GLKPD Y+YG+++N L  +G    A  +FD M  +G++ NV  Y ILI G+  KG     
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++   L++E  + P+   +N++     K    DE + ++++MK+     D   Y + I 
Sbjct: 363 HDLLN-LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALID 421

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LCK G V+ A   + +M+  G+  +   +N+++ G C   K ++  E +  M  +G   
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV +N ++  L   G+V +A  + +L+          ++  LI G C            
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCL----------- 530

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +AA  ++ M   G K + +T N+L++G+ +A ++++A  +F+EM R G
Sbjct: 531 -------VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +P VV+Y+T+++GL    RF EA      M+  G + ++  Y++++NGL ++  +D A 
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           KL      K F  ++T +NI+I  L  +G+ EDA+ L++ +     VP++ TY  + + L
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL 703

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
            + G  ++  ++++ + +    P+    N  ++ L     ++ A  +L
Sbjct: 704 IEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 237/508 (46%), Gaps = 33/508 (6%)

Query: 141 VINGLVKSGDLL--GALAVFDEMFERGVETNVVCYNILIDGFFK-KGDYMRAKE------ 191
           VI    +SG L    AL +FD +       +V+ +N L+    +  G      E      
Sbjct: 18  VIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVS 77

Query: 192 IWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++ R++ E +  V P+  TY+++I   C+ GR +     +  + K+    ++      + 
Sbjct: 78  LFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 250 GLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GR 304
           GLC A  + E  + + + M E G   D V+YN ++ GFC   + +E  EL  +M    GR
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               NVVSY I+I G    G+VD+A +++  + ++    +  T+  +I+GLCK   +++A
Sbjct: 198 SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 365 IQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +  ++ + G                  G+  +   ++  M  HG K + YT  SL+N 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                +   A FLF  M RKG  P V  Y  LI+G        E +  +  M+E G  PD
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              ++++     +   ID A+ +  +  Q+G +PDV  Y  LI  LC  G+V+DA+  ++
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      PN+  +N+L+ GL      +KA E +  +L + +RPD++ +N  L  LC+  
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           ++  A   ++     G  P  I++  L+
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLI 525



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 208/457 (45%), Gaps = 42/457 (9%)

Query: 40  LFHHILRRLIDPKLVVH------------VSRILELIE--IQKCYCPEDVALSVI-QAYG 84
           LF  ++R+ I P + ++            +S + +L+   ++    P+    ++I  AY 
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 85  KNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K +M D+A+ +F +M +         +G     LC+  + + A    N +  +G+ P+++
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            + +++ GL        A   + EM  +G+  +VV +N ++     KG  M+A+ + + L
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID-L 508

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      P V++Y  +I G C  GR DE  +  D M     + D +TY + +HG C+AG 
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           ++ A  V+REM+ +GI    VTY+ ++ G     +  E  EL+  M   G   N+  YNI
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           ++ GL +N  VDEA  +++ L  K+   + TT  ++I  L K+G    A+ +   +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EG L +   L + M+K G   N+   N+L+   +    +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
               ++  K  S    +   LI+ L + E    A S 
Sbjct: 749 AYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 133/271 (49%), Gaps = 14/271 (5%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS-------KLENAI 418
           +++      G   L DA  L + +  H    +    N L+    + S       + E  +
Sbjct: 17  RVIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVV 76

Query: 419 FLFKEMSRK---GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            LF  M R+     +P   +Y+ LI   C++ R    ++    +L+ GW+ + I  + L+
Sbjct: 77  SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 476 NGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KK 531
            GLC +K++  A+ +  + + + G TPDV  YN L+ G C+  + E+AL+L   M   + 
Sbjct: 137 KGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R+C PN+V+Y  +++G F  G  DKA  ++  +++  ++P++++Y   + GLC    +  
Sbjct: 197 RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A       + +G+ P   T++ L+   ++ G
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKPD ++Y T+++G  ++G +  A  VF EM   G+   V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y+ ++ G F    +  AKE++  ++     + N+  YN+++NGL K    DE  +++ 
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQW-NIWIYNIILNGLSKNNCVDEAFKLFQ 647

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +   + + +  T+   I  L K+G  E A  ++  +   G+  D  TY  + +     G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E  +L+  M + G   N    N L+R LL  G +  A +    L EKN + +++T  
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTA 767

Query: 350 VLINGLCKNGYLNKAI------QILNEVEE 373
           +LI+ L ++ Y + A       ++LNE ++
Sbjct: 768 MLISLLSRDEYHHHATSLPEKYRVLNEAKK 797


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 169/556 (30%), Positives = 273/556 (49%), Gaps = 59/556 (10%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           F+     + C    L R  Q E+A R     W + L PD  +YG +I GL   G L  A 
Sbjct: 86  FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLAC 145

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
           ++++EM +RG+   V+    L++   K G+   A   +E++    S  P   T+ ++I+G
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM----SSIPCAATWTILIDG 201

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           L +  R DE    ++ MK      +++TY   I+GL KAG V  AERV +EM    +   
Sbjct: 202 LFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTL--- 257

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
              Y ++I G C+AG + + + L E M RKG   + ++YN LI G     ++D A  + E
Sbjct: 258 -ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLE 316

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            ++  +   D  T+ +LI GLC+   L++A  +L               +L N  D   C
Sbjct: 317 EMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLL--------------GTLRNEDD---C 359

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N  + N+L++GF +A+++ +A  LF EM   G  P VV+Y+TLI GLC   R  EA+S
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           +++EM+ K   P +  YS +I+GLC++ ++D A  +    +  G  P++ +YN LI+GLC
Sbjct: 420 YLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR---- 570
             G++ DA      M +R C P+ VTY TL+ GL +    D+A +++   LE+ +     
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISET 539

Query: 571 ----------------------------PDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
                                       P    Y   ++ LC  + +++A + L D +  
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599

Query: 603 GILPTTITWHILVRAV 618
           GI P   T   LV A+
Sbjct: 600 GIKPDGSTVDALVGAM 615



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 270/640 (42%), Gaps = 69/640 (10%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           +V++ K LLN L    N   AL  F+  +  P  A    L   + R +   +   +    
Sbjct: 159 VVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFE-- 216

Query: 61  LELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMN----EIFGCEAGILCRKRQ 115
               E++    P +   +V I    K     +A  V Q M       +    G  C+   
Sbjct: 217 ----EMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGD 272

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
             KA   L  +  KG + D  +Y T+I+G  +  ++  A  + +EM       ++  Y+I
Sbjct: 273 MGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDI 332

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI G  +      A+++   L  E    PNVV+YN +I+G  K  R ++  +++  M   
Sbjct: 333 LIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTA 392

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
            +  D  TY + I GLC AG    A     EMV   I      Y+++I G CRAG++   
Sbjct: 393 GQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAA 452

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +++ M   GC  N+  YN LI GL + G++ +A    + + E+ C+ D  T+G LI G
Sbjct: 453 STVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVG 512

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC+                    R  +A  L  R  + G +++  +CN ++        L
Sbjct: 513 LCR------------------WSRTDEACDLYVRSLEQGIEISETSCNVVIASL---RCL 551

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  + + +   G SPT   Y T+I  LCK     EA   +++M+  G KPD  T   L
Sbjct: 552 EQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDAL 611

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK---------------- 518
           +  +C+  K  +A+    + ++ G  P V  Y+ L++ L  AGK                
Sbjct: 612 VGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTS 671

Query: 519 --------------------VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
                               VE+A  +   +K +  + ++V YNTL+ GLF+T +     
Sbjct: 672 CFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVY 731

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           E+   +       +  ++NI ++G C   +   A   L++
Sbjct: 732 ELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE 771



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 26/419 (6%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
            V TYN     L + G+ +E   ++      E   DS TY   I GLC  G ++ A  +Y
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENG 324
            EMV+ G+    +T   +++  C++G ++     +E M    C    ++ ILI GL    
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC--AATWTILIDGLFRAI 206

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           +VDEA   +E ++      ++ T+ V+INGL K G + +A ++L E+            +
Sbjct: 207 RVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMP---------VPT 256

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L N           YT  S++ G  +A  +  A  L ++M RKG     ++YNTLI+G C
Sbjct: 257 LAN-----------YT--SVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHC 303

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTPDV 503
           +++    AY  ++EM    + PD+ TY +LI GLC++K++  A  L      +   TP+V
Sbjct: 304 RLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNV 363

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN LI G   A +V DA QL+  M      P++VTY+TL+ GL   G   +A      
Sbjct: 364 VSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEE 423

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ +++ P +  Y+  + GLC    +  A    +  +  G  P    ++ L+  +   G
Sbjct: 424 MVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 170/350 (48%), Gaps = 28/350 (8%)

Query: 278 TYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           TYN   +   R G+ +E + L+ E   ++   + ++Y ILIRGL   GK+  A S++E +
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
            ++       T   L+N LCK+G L  A++                     +M    C  
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFE------------------KMSSIPC-- 191

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A T   L++G  +A +++ A + F+EM      P   +Y  +INGL K  +  EA   +
Sbjct: 192 -AATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVL 249

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +EM      P +  Y+ +I G C++  +  A  L     +KG+  D   YN LIHG C  
Sbjct: 250 QEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRL 305

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL-EERLRPDIIS 575
            +++ A +L   MK  + VP++ TY+ L+ GL +     +A ++   +  E+   P+++S
Sbjct: 306 QEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVS 365

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G    +R++DA++   + +  G  P  +T+  L+R + N G ++
Sbjct: 366 YNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRAS 415



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 36/233 (15%)

Query: 415 ENAIFLFK-EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           E+A+  F    +R+    TV +YN     L +  +  EAY   KE   +   PD ITY +
Sbjct: 71  ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGI 130

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK--- 530
           LI GLC   K+ +A  L  + + +G  P V     L++ LC +G +E AL+ +  M    
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIP 190

Query: 531 ----------------------------KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
                                       K   +PN  TY  +++GL K G   +A     
Sbjct: 191 CAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA----E 246

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +L+E   P + +Y   + G C    M  A+  L D   +G     +T++ L+
Sbjct: 247 RVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLI 299



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 3/192 (1%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GV 166
           G +CR+ +   A  FL  +   G KP V +Y T++N L K+G    A  V   +      
Sbjct: 613 GAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSC 672

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             + + Y  LI  +  +     A+ + + L  +  +  ++V YN ++ GL +        
Sbjct: 673 FPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGI-QSIVAYNTLLKGLFRTRNLQMVY 731

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E+   MK+NE   +  T+   I G C+ G  + A RV  EM +  +   A     ++D  
Sbjct: 732 ELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLVDEL 790

Query: 287 CRAGKIKECFEL 298
            RA + +E  +L
Sbjct: 791 ARAEREQESKDL 802



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 73/197 (37%), Gaps = 44/197 (22%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALD 94
           A  P   H +LRRLI      H S          C+  E   + +I AY      ++A +
Sbjct: 653 AGKPSEAHVVLRRLIS-----HTS----------CFPDELWYVGLIAAYSNQDQVEEARN 697

Query: 95  VFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           V Q +   +G ++                           + +Y T++ GL ++ +L   
Sbjct: 698 VLQELKSKWGIQS---------------------------IVAYNTLLKGLFRTRNLQMV 730

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
             +  EM       N   +NILI GF + G   RA  +     M+  + P+      +++
Sbjct: 731 YELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE--MKKVLTPSAAIIKFLVD 788

Query: 215 GLCKCGRFDECLEMWDR 231
            L +  R  E  ++  R
Sbjct: 789 ELARAEREQESKDLVKR 805


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/657 (25%), Positives = 311/657 (47%), Gaps = 69/657 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L+  L A   P   L LF    +E GY  + HLF  ++R       +     +L+  E++
Sbjct: 209 LIGALSAANRPDPMLTLFHQ-MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLD--EMK 265

Query: 68  KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKR--- 114
                 D+ L    I  +GK    D A   F  M        +  +    G+LC+ R   
Sbjct: 266 SNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLD 325

Query: 115 --------------------------------QFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
                                           +F++A   L     KG  P V +Y  ++
Sbjct: 326 EAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCIL 385

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
             L + G +  AL + DEM  +    N+  YNILID   K G+   A ++ + +  E  +
Sbjct: 386 TCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTM-KEAGL 443

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +PN++T N+MI+ LCK  + DE   ++  +       DS T+CS I GL + G V+ A  
Sbjct: 444 FPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +Y +M++S    + V Y ++I  F + G+ ++  ++++ M  +GC  +++  N  +  + 
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G+V++  +++E ++ +    D  ++ +LI+GL K G+  +  ++  E++E        
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE-------- 615

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      G  L+    N++++GF ++ K++ A  L +EM  KG  PTVV+Y ++++
Sbjct: 616 ----------QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVD 665

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL K++R  EAY   +E    G   +++ YS LI+G  +  +ID A  +  + +QKG TP
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 725

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   +N L+  L  A ++++A   + NMK   C PN +TY+ +++GL      +KA   W
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             + ++ L+P+ I+Y   + GL     + +A    +     G +P +  ++ ++  +
Sbjct: 786 QEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 301/637 (47%), Gaps = 26/637 (4%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ ++K  K+ + A   F    R+   AH P +++  L  +   + + ++ +ILE + + 
Sbjct: 103 IVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVA 162

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
                  V++ ++ ++ K+    +A  V + M +         +    G L    + +  
Sbjct: 163 GFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPM 222

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
               + + E G + +V+ + T++    + G +  AL++ DEM       ++V YN+ ID 
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDC 282

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G    A + +  +  +  V P+ VTY  +I  LCK  R DE +E+++ +  N    
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLV-PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVP 341

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
             + Y + I G   AG  + A  +       G     + YN ++    R GK++E   + 
Sbjct: 342 CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH 401

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           + M +    N+ +YNILI  L + G+++ A+ + + ++E     +  T  ++I+ LCK  
Sbjct: 402 DEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            L++A  I   ++                  G  GR+ DA SL  +M       N     
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+  F +  + E+   ++KEM  +GCSP ++  N+ ++ + K     +  +  +E+  +
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD+ +YS+LI+GL ++       KL  +  ++G   DV  YN +I G C +GKV+ A
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            QL   MK +   P +VTY +++DGL K    D+A  ++       +  +++ Y+  + G
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                R+ +A+  L + + +G+ P + TW+ L+ A++
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALV 738



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 264/551 (47%), Gaps = 64/551 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  YG     D+A  + +R            + C    L RK + E+A R  + + + 
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI-------------- 175
              P++ +Y  +I+ L K+G+L  AL V D M E G+  N++  NI              
Sbjct: 408 A-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 176 ---------------------LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
                                LIDG  ++G    A  ++E++ +++   PNVV Y  +I 
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM-LDSDQIPNVVVYTSLIQ 525

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
              KCGR ++  +++  M       D     S++  + KAG VE    ++ E+   G+  
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           D  +Y+ +I G  +AG  +E ++L+  M  +G  L+V++YN +I G  ++GKVD+A  + 
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-----------------GGE 376
           E ++ K       T+G +++GL K   L++A  +  E +                  G  
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ +A  ++  + + G   N+YT N L++  ++A +++ A   F+ M    CSP  ++Y
Sbjct: 706 GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTY 765

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + +INGLC + +F +A+ F +EM ++G KP+ ITY+ +I GL ++  +  A  L  +F  
Sbjct: 766 SIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA 825

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PD   YN +I GL SA K  DA  ++   + + C  N  T   L+D L K  DC +
Sbjct: 826 SGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHK-ADCLE 884

Query: 557 ALEIWNHILEE 567
              I   +L E
Sbjct: 885 QAAIVGAVLRE 895



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 240/542 (44%), Gaps = 29/542 (5%)

Query: 89  PD--KALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK---PDVYSYGTVIN 143
           PD  +AL+VF  M++      G++ R +    A ++   +  K  +   P+VY+   ++ 
Sbjct: 85  PDVEEALNVFDEMSQP-EVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVM 143

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
              ++ D L    + +EM   G   +      L+  F K      A  + E ++ +    
Sbjct: 144 ARTRNLDYLEQ--ILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE-MMRKFKFR 200

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    Y  +I  L    R D  L ++ +M++   E +   + + +    + G ++ A  +
Sbjct: 201 PAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSL 260

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             EM  +    D V YN  ID F + GK+   ++ +  M  +G + + V+Y  LI  L +
Sbjct: 261 LDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK 320

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
             ++DEA+ ++E L           +  +I G                   G  G+  +A
Sbjct: 321 ARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY------------------GSAGKFDEA 362

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            SL+ R  + GC  +    N ++    +  K+E A+ +  EM R+  +P + +YN LI+ 
Sbjct: 363 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDM 421

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK      A      M E G  P+++T +++I+ LC+++K+D A  +      K  +PD
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              +  LI GL   G+V+DA  LY  M   + +PN+V Y +L+   FK G  +   +I+ 
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK 541

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++     PD++  N  +  +     +        +   +G++P   ++ IL+  ++  G
Sbjct: 542 EMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601

Query: 623 AS 624
            S
Sbjct: 602 FS 603


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 244/486 (50%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +SY  VI G+ ++G    A+ VFDEM ER V  N + YN +IDG  K GD      +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++V    + PN +TYNV+++GLC+ GR  E   + D M   +   D FTY     GL 
Sbjct: 258 RDQMVCH-GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-V 311
           + G+ +    ++ + +++G+ +   T + +++G C+ GK+    E+ + +   G +   V
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G+++ A S +  ++ ++   D  T+  LINGLCK              
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK-------------- 422

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R+ +A  L+  M  +G      T N+L++ + +  +LE    +  EM   G  P
Sbjct: 423 ----AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY +++N  CK  +  EA + + +M  K   P+   Y+ +I+   +    D A  L 
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G +P +  YN+LI GLC+  ++ +A ++ +++     +P+ V+YNTL+      
Sbjct: 539 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 598

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ DKAL++   + +  ++  + +Y+  + GL    R+++        +   ++P+    
Sbjct: 599 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 658

Query: 612 HILVRA 617
           +I+V A
Sbjct: 659 NIMVEA 664



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 232/462 (50%), Gaps = 19/462 (4%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
            F  +   G   +   +N  +      GD   A  +  R+  + +  PN  +YNV+I G+
Sbjct: 151 AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 210

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            + GR  + +E++D M +     +  TY + I G  K G++E   R+  +MV  G+  +A
Sbjct: 211 WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 270

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           +TYN ++ G CRAG++ E   L + M  +K   +  +Y+IL  GL  NG     +S++  
Sbjct: 271 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 330

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
             +        T  +L+NGLCK+G ++ A ++L               SLVN     G  
Sbjct: 331 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ--------------SLVNA----GLV 372

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                 N+L+NG+ Q  +LE A   F +M  +   P  ++YN LINGLCK ER   A   
Sbjct: 373 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 432

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + EM + G  P + T++ LI+   ++ +++    +  +  + G  P+V  Y  +++  C 
Sbjct: 433 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK+ +A+ +  +M  ++ +PN   YN ++D   + G  D+A  +   +    + P I++
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           YN+ +KGLC+ S++S+A E +N      ++P  ++++ L+ A
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 594



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 203/426 (47%), Gaps = 21/426 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L+ +  + + PD ++Y  + +GL ++GD    L++F +  + GV   
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G    A+E+ + LV    + P  V YN +ING C+ G  +     +
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLV-NAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK    + D  TY + I+GLCKA  +  A+ +  EM ++G+     T+N +ID + R 
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 458

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M   G   NVVSY  ++    +NGK+ EA++I + +  K+   ++  +
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 518

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+   ++G  ++A                    LV +M  +G   +  T N L+ G 
Sbjct: 519 NAIIDAYVEHGPNDQAF------------------ILVEKMKSNGISPSIVTYNLLIKGL 560

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              S++  A  +   +S     P  VSYNTLI+  C      +A    + M + G K  +
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 620

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY  LI+GL  + +++    L  + +Q    P   ++NI++      G    A  L   
Sbjct: 621 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 680

Query: 529 M-KKRN 533
           M +KRN
Sbjct: 681 MLQKRN 686



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 157/363 (43%), Gaps = 55/363 (15%)

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRG 319
           R +  +  +G   D   +N  +     AG + E   +   MGR G    N  SYN++I G
Sbjct: 150 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 209

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           +            W                                           GR 
Sbjct: 210 M------------WR-----------------------------------------AGRG 216

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA  + + M +     N  T N++++G I+   LE    L  +M   G  P  ++YN L
Sbjct: 217 GDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 276

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++GLC+  R GE  + + EM  +   PD  TYS+L +GL ++      L L  ++L+ G 
Sbjct: 277 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 336

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           T      +IL++GLC  GKV  A ++  ++     VP  V YNTL++G  +TG+ + A  
Sbjct: 337 TIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 396

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            +  +    ++PD I+YN  + GLC   R+++A + L +    G+ PT  T++ L+ A  
Sbjct: 397 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 456

Query: 620 NNG 622
             G
Sbjct: 457 RTG 459



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 1/195 (0%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++ S N L+  L  + R  +       +   G +PD   ++  +     +  +  A+ +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 491 CCQFLQKGFTP-DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
             +  + G  P +   YN++I G+  AG+  DA++++  M +R  +PN +TYNT++DG  
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K GD +    + + ++   L+P+ I+YN+ L GLC   RM +    L++   + ++P   
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306

Query: 610 TWHILVRAVMNNGAS 624
           T+ IL   +  NG S
Sbjct: 307 TYSILFDGLSRNGDS 321


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 273/553 (49%), Gaps = 58/553 (10%)

Query: 101 EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           ++  C   I  L +  Q ++A+    +L++  L P+  +Y  +I+   K GD+ GA +  
Sbjct: 79  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESAL 138

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
            EM E+    NV+ Y+ LI+G+ K+G    A ++  ++V + ++ PN+ TY ++++G  K
Sbjct: 139 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM-PNICTYAILLDGSFK 197

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  D  L+++ +MK+   + + F   +F++ + ++G +E AE +  +M   G+  D V 
Sbjct: 198 AGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVN 257

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y  ++DGF ++GK+     L + M  K  + ++V++N+LI  L + GK D   SI+  +R
Sbjct: 258 YTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMR 316

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           E   + D  T+  ++NG  K G    A+++ NE                  M       N
Sbjct: 317 EMGLSPDLATYNTMLNGNFKKGNWTSALELWNE------------------MKSRKLIPN 358

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY--------------------- 436
           A TCN ++NG  +A ++ENAI + KEM   G  PT  +Y                     
Sbjct: 359 AITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHE 418

Query: 437 --------------NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                         N LI+ LCK+    +A + +K+M E+G   D  TY+ LI+G C S 
Sbjct: 419 LLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISS 478

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +  A       L +  +PD+  YN+L+ GL  AG + +A  L S +KKR  VPN  TY 
Sbjct: 479 HLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYE 538

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TLM G  K  +  + L I+  ++ +   P   +YN+ +       +M  A E +N+   +
Sbjct: 539 TLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 598

Query: 603 GILPTTITWHILV 615
           G+ PT  T+ IL+
Sbjct: 599 GVSPTCTTYDILI 611



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 250/539 (46%), Gaps = 55/539 (10%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PDV ++G+++ GL K G L     +  EM + G+  N V Y IL+D  FK G    A
Sbjct: 5   GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
                 +++  + + +V+   V+I+GL K G+  E   ++  + +     +  TY + I 
Sbjct: 65  LMTLACMIVRGNNF-DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALID 123

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
             CK G++ GAE    EM E     + +TY+++I+G+ + G + + F++   M  K  + 
Sbjct: 124 SRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMP 183

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N+ +Y IL+ G  + G  D A+ ++  +++     +       +N + ++G + +A +++
Sbjct: 184 NICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELV 243

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            ++  GG                  G+++ A +L   M       +  T N L+N   + 
Sbjct: 244 AKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKL 303

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K +    ++  M   G SP + +YNT++NG  K   +  A     EM  +   P+ IT 
Sbjct: 304 GKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITC 362

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTP------------------------------ 501
           +++INGLC++ +++ A+ +  + +  G  P                              
Sbjct: 363 NIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVN 422

Query: 502 -----DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                D  +YNILI  LC  G    A  +  +M++R  + +  TYN L+ G   +    +
Sbjct: 423 MQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKR 482

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           A   ++ +L ER+ PDI +YN+ L GL     + +A + L++   RG++P   T+  L+
Sbjct: 483 AFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLM 541



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 197/402 (49%), Gaps = 54/402 (13%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           MV SGIF D VT+ +++ G C+ GK+ E   L   MG+ G  LN VSY IL+  L + GK
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA------IQILNEVEE------ 373
           V EA+     +  +  N D     VLI+GL K+G + +A      +  LN V        
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 374 --GGEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                 +L D   A S ++ M++  C  N  T +SL+NG+++   L +A  + ++M  K 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 429 CSPTVVSYNTLINGLCKV-----------------------------------ERFGEAY 453
             P + +Y  L++G  K                                     R  EA 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             V +M   G KPD++ Y+ L++G  +S K+  AL L  +   K    D+  +N+LI+ L
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              GK  D   +YS M++    P+L TYNT+++G FK G+   ALE+WN +   +L P+ 
Sbjct: 301 FKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNA 359

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I+ NI + GLC   RM +A + L + +  G+ PT+ T+ IL+
Sbjct: 360 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 401



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 217/471 (46%), Gaps = 54/471 (11%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
           + ++P+VVT+  ++ GLCK G+  E   +   M K     ++ +Y   +  L KAG V  
Sbjct: 4   SGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAE 63

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-------------------- 299
           A      M+  G   D +    +IDG  ++G+IKE   L+                    
Sbjct: 64  ALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALID 123

Query: 300 ---------------EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
                            M  K C+ NV++Y+ LI G ++ G + +A  +   +  KN   
Sbjct: 124 SRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMP 183

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           +  T+ +L++G  K G+ + A+ + +++++GG                  GR+ +A  LV
Sbjct: 184 NICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELV 243

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
            +M   G K +     +LM+GF+++ K+ +A+ L +EM+ K     +V++N LIN L K+
Sbjct: 244 AKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKL 303

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  +  S    M E G  PD+ TY+ ++NG  +      AL+L  +   +   P+    
Sbjct: 304 GK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITC 362

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NI+I+GLC AG++E+A+ +   M      P   TY  L++   K+   D  L+    ++ 
Sbjct: 363 NIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVN 422

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +L+ D   YNI +  LC       A   L D   RGI+  T T++ L+  
Sbjct: 423 MQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHG 473



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 145/298 (48%), Gaps = 17/298 (5%)

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D  T G ++ GLCK+G L++   +L E+ + G                  G++A+A   +
Sbjct: 9   DVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTL 68

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   G   +   C  L++G  ++ +++ A +LF  + +    P  ++Y+ LI+  CK+
Sbjct: 69  ACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKL 128

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
                A S + EM EK   P++ITYS LING  +   +  A K+  + + K   P++  Y
Sbjct: 129 GDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTY 188

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            IL+ G   AG  + AL LYS MK+     N+   +  ++ + ++G  ++A E+   +  
Sbjct: 189 AILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMAS 248

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             L+PD+++Y   + G     ++S A     +   + ++   +T+++L+  +   G S
Sbjct: 249 GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKS 306



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%)

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+  G  PD++T+  ++ GLC+  K+     L  +  + G   +   Y IL+  L  AGK
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           V +AL   + M  R    +++    L+DGLFK+G   +A  ++ ++ +  L P+ I+Y+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   C    ++ A   L++   +  +P  IT+  L+   +  G
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQG 164



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           E +    G L +     +A   L+ + ++GL P+  +Y T++ G  K  +    L ++ E
Sbjct: 500 ETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCE 559

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           M  +G       YN+LI  F K G   +AKE+   +  +  V P   TY+++I G C
Sbjct: 560 MVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK-GVSPTCTTYDILICGWC 615


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 269/542 (49%), Gaps = 48/542 (8%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + + G+ P+ Y++  +I  L +S  L  A  +FD+M E+G + N     IL+ GF + G 
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAG- 200

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             R K+  E +  +     N V YN +++  CK    DE  ++ +RM +     D  T+ 
Sbjct: 201 --RTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFN 258

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIF----VDAVTYNAMIDGFCRAGKIKECFELWEV 301
           S I  LC+AG V  A R++R+M   G       + VT+N M+ GFC+ G ++E   L E 
Sbjct: 259 SRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVET 318

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + G  +++ SYN  + GLL NGK+ E  S+ + + E     +  ++ ++++GLC+N  
Sbjct: 319 MKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHM 378

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  A ++++ +   G                 +G++ +A +++N M + GC  N YTCN+
Sbjct: 379 MLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNT 438

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+N   +  +   A  + ++M+ K      V+ N ++NGLC+     +A   V EM   G
Sbjct: 439 LLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG 498

Query: 464 WK----------------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
                                   PD+ITY+ LINGLC+  K++ A K   + + K   P
Sbjct: 499 TNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP 558

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   Y+  +   C  GK+  AL++  +M++  C   L TYN+L+ GL   G   +   + 
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL-PTTITWHILVRAVMN 620
           + + E  + PDI +YN  +  LC   +  DA   L++ L +G++ P   ++ IL++A   
Sbjct: 619 DEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678

Query: 621 NG 622
           +G
Sbjct: 679 SG 680



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 300/668 (44%), Gaps = 91/668 (13%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           +  PH   +L+     + G     + F+ +++ L +   + H   + + +  + C   + 
Sbjct: 129 QNRPHYVTSLYTDMI-QTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 75  VALSVIQAYGKNSMPDKALDVFQ-----RMNEI-FGCEAGILCRKRQFEKAKRFLNSLWE 128
               +++ + +     +AL+         +N + +       C++   ++A++ +  + E
Sbjct: 188 TVGILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTE 247

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG----VETNVVCYNILIDGFFKKG 184
           KGL PDV ++ + I+ L ++G +  A  +F +M   G     + NVV +N+++ GF ++G
Sbjct: 248 KGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEG 307

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A+ + E +  +   + ++ +YN  + GL + G+  E   + D M +N  E + ++Y
Sbjct: 308 MMEEARSLVETM-KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSY 366

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              + GLC+   +  A R+   MV +G++ D VTY  ++ G+C  GK+ E   +   M R
Sbjct: 367 NIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           KGC  N  + N L+  L + G+  EA  + + + EK+   D+ T  +++NGLC+NG L K
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486

Query: 364 AIQILNEVEEGGE---GRLADAASLVNRMDKHGCKLNA---YTCNSLMNGFIQASKLE-- 415
           A ++++E+   G    G+    A LVN +  H    N     T  +L+NG  +  KLE  
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSI--HNVSTNVPDVITYTTLINGLCKVGKLEEA 544

Query: 416 ---------------------------------NAIFLFKEMSRKGCSPTVVSYNTLING 442
                                            +A+ + K+M R GCS T+ +YN+LI G
Sbjct: 545 KKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILG 604

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF-TP 501
           L    +  E Y  + EM E+G  PD+ TY+ +IN LC+  K   A  L  + L KG  +P
Sbjct: 605 LGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSP 664

Query: 502 DVTMYNILIHGLC----------------------------------SAGKVEDALQLYS 527
           +V+ + ILI   C                                  + GK+ DA +L+ 
Sbjct: 665 NVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFE 724

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
              +R+ +     Y  L+D L K G  D A  +   ++++    D  S+   + GL    
Sbjct: 725 ASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRG 784

Query: 588 RMSDAFEF 595
               A E 
Sbjct: 785 NKQQADEL 792



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 67/370 (18%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           +++ +  K     +A ++ Q+MNE         C   +  LCR  + EKA   ++ +W  
Sbjct: 438 TLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTD 497

Query: 130 GLK----------------------PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G                        PDV +Y T+INGL K G L  A   F EM  + + 
Sbjct: 498 GTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH 557

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            + V Y+  +  F K+G    A  + + +         + TYN +I GL   G+  E   
Sbjct: 558 PDSVTYDTFVLNFCKQGKISSALRVLKDM-ERNGCSKTLQTYNSLILGLGSKGQIFEMYG 616

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT-YNAMIDGF 286
           + D M++     D  TY + I+ LC+ G  + A  +  EM++ G+    V+ +  +I  F
Sbjct: 617 LMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAF 676

Query: 287 CRAGKIKECFELWEVM----GRKGCLNVVSYNILIRG----------------------- 319
           C++G  K   EL++V     G K  L  + +N L+ G                       
Sbjct: 677 CKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNF 736

Query: 320 --------LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
                   L ++G++D+A  + + L +K    D ++   +I+GL K G   +A ++   +
Sbjct: 737 MYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796

Query: 372 EEGGEGRLAD 381
           E   E + +D
Sbjct: 797 ELALEDKTSD 806



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 34/350 (9%)

Query: 51  PKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDK-ALDVFQRMNEIFGCEAGI 109
           P ++ + + I  L ++ K    E+     I+   KN  PD    D F  +N         
Sbjct: 523 PDVITYTTLINGLCKVGKL---EEAKKKFIEMMAKNLHPDSVTYDTFV-LN--------- 569

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ +   A R L  +   G    + +Y ++I GL   G +     + DEM ERG+  +
Sbjct: 570 FCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN +I+   + G    A  +   ++ +  V PNV ++ ++I   CK G F    E++
Sbjct: 630 ICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF 689

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D        K++  Y    + L   G +  A+ ++   +E  +      Y  +ID  C+ 
Sbjct: 690 DVALSVCGHKEAL-YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKD 748

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG---KVDEAISIWELLREKNCNADS 345
           G++ +   L + +  KG C +  S+  +I GL + G   + DE   I EL  E   +  +
Sbjct: 749 GRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKTSDRT 808

Query: 346 TTHG--VLINGLCKNGYL------------NKAIQILNEVEEG-GEGRLA 380
             +G  +    L K+G              N A++ L  VE+G G+G ++
Sbjct: 809 YRNGNSIFRRKLHKDGGSDWQDIINRDIGGNIALKTLKRVEKGWGQGSIS 858



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 39/73 (53%)

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           LY++M +    P   T+N L+  L ++   D A E+++ + E+  +P+  +  I ++G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 585 SCSRMSDAFEFLN 597
              R   A EF++
Sbjct: 198 RAGRTKQALEFVD 210


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 255/494 (51%), Gaps = 30/494 (6%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D  + ++++M E FG    +         LC           L  +++ G KP + ++ T
Sbjct: 121 DSVVSIYRKM-EFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNT 179

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +INGL   G ++ A+   D +  RG +  V  + ++++G  K G    A  +W + ++E 
Sbjct: 180 LINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK-TSAAIVWMKKMVEL 238

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              P VV+Y+++I+ LCK    +E ++++  M+         TY S I+G+C +G  + A
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQA 298

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
             +++EM+E  +  D VT++ ++D  C+ G + E   ++  M +     ++V+Y+ LI G
Sbjct: 299 SILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHG 358

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           + ++    E+ ++   +  +N   D  T  + ++  CK                  +G +
Sbjct: 359 VCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK------------------KGMV 400

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
           ++A S++N M + G + N  T NSLM+G+   S+++ A  +F  M  KGC+P V+SYN L
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I G CK ER  EA     EM  KG  P+ IT++ LI+GLCQ+ +   A +L  +    G 
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD+  Y+ L+ G C  G +++AL L+  +KK    PN V    L+ G+ K G  + A E
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580

Query: 560 IWNHILEERLRPDI 573
           +++ +  E L+PD+
Sbjct: 581 LFSSLSIEELQPDV 594



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 260/532 (48%), Gaps = 28/532 (5%)

Query: 84  GKNSMPDKALDVFQRMNEI--FGCEA------GILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           G  S  D AL  F +M  +  F C          L R + ++        +   G+   V
Sbjct: 80  GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           Y+   +IN L     +    +V  ++F+ G + +++ +N LI+G   +G  + A E  + 
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD- 198

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            +M     P V T+ +++NGLCK G+    +    +M + + E +  +Y   I  LCK  
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYN 314
            V  A  ++  M   GI    VTYN++I G C +G+ K+   L+ E++      +VV+++
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           IL+  L + G V EA+S++  + +     D  T+  LI+G+CK+                
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK------------ 366

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                 ++++L+N M     + +  T +  ++ F +   +  A  +   M  +G  P VV
Sbjct: 367 ------ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN+L++G C   +  EA      M+ KG  PD+++Y++LI G C+S++ID A +L  + 
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
             KG TP+   +  LI GLC AG+   A +L+  M    C P+L+TY+TL+ G  K G  
Sbjct: 481 SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHL 540

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           D+AL ++  + + +L+P+ +   I L G+C   ++ DA E  +      + P
Sbjct: 541 DEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 208/421 (49%), Gaps = 19/421 (4%)

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +P +  +N ++  L +   +D  + ++ +M+        +T    I+ LC    V     
Sbjct: 101 FPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFS 160

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLL 321
           V  ++ + G     +T+N +I+G C  G+I E  E  + +M R     V ++ +++ GL 
Sbjct: 161 VLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLC 220

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + GK   AI   + + E +C  +  ++ ++I+ LCKN  +N+A+                
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD--------------- 265

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L   M   G      T NSL+ G   + + + A  LFKEM      P VV+++ L++
Sbjct: 266 ---LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LCK     EA S   +M++   +PD++TYS LI+G+C+S     +  L  + L +   P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  ++I +   C  G V +A  + + M +R   PN+VTYN+LMDG       D+A +++
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + ++ +   PD++SYNI +KG C   R+ +A +  ++   +G+ P +IT   L+  +   
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 622 G 622
           G
Sbjct: 503 G 503



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 60/141 (42%)

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D AL    Q +     P +T +N L+  L      +  + +Y  M+      ++ T   L
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++ L           +   I +   +P II++N  + GLC   R+ +A E L+  + RG 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 605 LPTTITWHILVRAVMNNGAST 625
            PT  T  ++V  +   G ++
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTS 226


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 173/604 (28%), Positives = 297/604 (49%), Gaps = 39/604 (6%)

Query: 32  PGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI-----QKCYCPEDVAL-SVIQAYGK 85
           P ++    L   +   L+ P ++   +R+ E +E+     Q    P   A  ++I  YG 
Sbjct: 43  PAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGS 102

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
               D+A  + +R            + C    L +KR+ E+A R    +    + P+V +
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPT 161

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I+ L + G L  AL + D+M   G+  NV+  NI+ID   K      A  I+E   
Sbjct: 162 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEG-- 219

Query: 198 METSV-YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           M+  V  PN VT++ +I+GL KCGR D+   ++++M        +  Y S I    K G 
Sbjct: 220 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            E   ++Y+EMV +G   D    N  +D   +AG+ ++   L+  +   G + +  SY+I
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 339

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI GL++ G  +E   ++  ++E+ C  D+  +  +I+G CK+G +NKA Q+L E     
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE----- 394

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G      T  S+++G  +  +L+ A  LF+E    G    VV 
Sbjct: 395 -------------MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 441

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y++LI+G  KV R  EAY  ++E+++KG  P++ T++ L++ L ++++I+ AL +C Q +
Sbjct: 442 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-ICFQSM 500

Query: 496 QK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +     P+   Y+ILI+GLC   K   A   +  M+K    PN +TY T++ GL K G+ 
Sbjct: 501 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 560

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A  +++        PD  SYN  ++GL S ++  DA+    +   +G    T T  +L
Sbjct: 561 LEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVL 620

Query: 615 VRAV 618
           + A+
Sbjct: 621 LDAL 624



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 253/515 (49%), Gaps = 21/515 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC+  + ++A      L +    P  Y+Y T+I G   +G    A  + +    +G   
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V+ YN ++    KK     A  I+E   M+    PNV TYN++I+ LC+ G+ +  LE+
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEE--MKRDAVPNVPTYNILIDMLCREGKLNAALEI 181

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M++     +  T    I  LCKA  +E A  ++  M +     +AVT++++IDG  +
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++ + + L+E M   G +   + Y  LIR   + G+ ++   I++ +    C+ D T 
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
               ++ + K G          E E+G         +L   ++ HG   +A + + L++G
Sbjct: 302 INTYMDCVFKAG----------ETEKG--------RALFREINAHGFIPDARSYSILIHG 343

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            ++A        LF  M  +GC     +YN +I+G CK  +  +AY  ++EM  KG  P 
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY  +I+GL +  ++D A  L  +    G   +V +Y+ LI G    G++++A  +  
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            + ++   PN+ T+N L+D L K  + ++AL  +  + + +  P+ I+Y+I + GLC   
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 523

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + AF F  +    G+ P TIT+  ++  +   G
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAG 558



 Score = 43.1 bits (100), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG---------- 547
           GF P   +   L+     + K+ +A  +   M+K    P    Y  L+            
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L K    D+A+E++  + + R  P   +YN  + G  S  +  +A+  L     +G +P+
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 608 TITWHILV 615
            I ++ ++
Sbjct: 125 VIAYNCIL 132


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 244/486 (50%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +SY  VI G+ ++G    A+ VFDEM ER V  N + YN +IDG  K GD      +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++V    + PN +TYNV+++GLC+ GR  E   + D M   +   D FTY     GL 
Sbjct: 73  RDQMVCH-GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-V 311
           + G+ +    ++ + +++G+ +   T + +++G C+ GK+    E+ + +   G +   V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G+++ A S +  ++ ++   D  T+  LINGLCK              
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK-------------- 237

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R+ +A  L+  M  +G      T N+L++ + +  +LE    +  EM   G  P
Sbjct: 238 ----AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY +++N  CK  +  EA + + +M  K   P+   Y+ +I+   +    D A  L 
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G +P +  YN+LI GLC+  ++ +A ++ +++     +P+ V+YNTL+      
Sbjct: 354 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 413

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ DKAL++   + +  ++  + +Y+  + GL    R+++        +   ++P+    
Sbjct: 414 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 473

Query: 612 HILVRA 617
           +I+V A
Sbjct: 474 NIMVEA 479



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 222/427 (51%), Gaps = 19/427 (4%)

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +  R+  + +  PN  +YNV+I G+ + GR  + +E++D M +     +  TY + I G 
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNV 310
            K G++E   R+  +MV  G+  +A+TYN ++ G CRAG++ E   L + M  +K   + 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +Y+IL  GL  NG     +S++    +        T  +L+NGLCK+G ++ A ++L  
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ- 179

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                        SLVN     G        N+L+NG+ Q  +LE A   F +M  +   
Sbjct: 180 -------------SLVNA----GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 222

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P  ++YN LINGLCK ER   A   + EM + G  P + T++ LI+   ++ +++    +
Sbjct: 223 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 282

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  + G  P+V  Y  +++  C  GK+ +A+ +  +M  ++ +PN   YN ++D   +
Sbjct: 283 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 342

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D+A  +   +    + P I++YN+ +KGLC+ S++S+A E +N      ++P  ++
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402

Query: 611 WHILVRA 617
           ++ L+ A
Sbjct: 403 YNTLISA 409



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 203/426 (47%), Gaps = 21/426 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L+ +  + + PD ++Y  + +GL ++GD    L++F +  + GV   
Sbjct: 95  LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 154

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G    A+E+ + LV    + P  V YN +ING C+ G  +     +
Sbjct: 155 DYTCSILLNGLCKDGKVSIAEEVLQSLV-NAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK    + D  TY + I+GLCKA  +  A+ +  EM ++G+     T+N +ID + R 
Sbjct: 214 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 273

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M   G   NVVSY  ++    +NGK+ EA++I + +  K+   ++  +
Sbjct: 274 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 333

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+   ++G  ++A                    LV +M  +G   +  T N L+ G 
Sbjct: 334 NAIIDAYVEHGPNDQAF------------------ILVEKMKSNGISPSIVTYNLLIKGL 375

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              S++  A  +   +S     P  VSYNTLI+  C      +A    + M + G K  +
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 435

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY  LI+GL  + +++    L  + +Q    P   ++NI++      G    A  L   
Sbjct: 436 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 495

Query: 529 M-KKRN 533
           M +KRN
Sbjct: 496 MLQKRN 501



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR  DA  + + M +     N  T N++++G I+   LE    L  +M   G  P  ++Y
Sbjct: 29  GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 88

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L++GLC+  R GE  + + EM  +   PD  TYS+L +GL ++      L L  ++L+
Sbjct: 89  NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 148

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G T      +IL++GLC  GKV  A ++  ++     VP  V YNTL++G  +TG+ + 
Sbjct: 149 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 208

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A   +  +    ++PD I+YN  + GLC   R+++A + L +    G+ PT  T++ L+ 
Sbjct: 209 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 268

Query: 617 AVMNNG 622
           A    G
Sbjct: 269 AYGRTG 274



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           F  +  R I P  + + + I  L + ++    +D+ +  +Q  G N      ++ F  + 
Sbjct: 213 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME-MQDNGVNP----TVETFNTLI 267

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           + +G       R  Q EK    L+ + E GLKP+V SYG+++N   K+G +  A+A+ D+
Sbjct: 268 DAYG-------RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           MF + V  N   YN +ID + + G   +A  + E++     + P++VTYN++I GLC   
Sbjct: 321 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQS 379

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           +  E  E+ + +  +    D+ +Y + I   C  GN++ A  + + M + GI     TY+
Sbjct: 380 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 439

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVS----YNILIRGLLENGKVDEAISIWELL 336
            +I G   AG++ E   L++ M +    NVV     +NI++    + G   +A  + + +
Sbjct: 440 QLISGLGGAGRLNEMEYLYQKMMQN---NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496

Query: 337 REKNCNADST 346
            +K  N D T
Sbjct: 497 LQKRNNHDDT 506



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 72/124 (58%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   YN++I G+  AG+  DA++++  M +R  +PN +TYNT++DG  K GD +    +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + ++   L+P+ I+YN+ L GLC   RM +    L++   + ++P   T+ IL   +  
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 621 NGAS 624
           NG S
Sbjct: 133 NGDS 136


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 293/600 (48%), Gaps = 38/600 (6%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I    +L  L+ E     AL  F S      + H+P  F  ++R+L     V  V  +L+
Sbjct: 40  IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 99

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
            +++Q  +C ED+ +SVI  Y +  + ++A+++F R+ E FGC+  +         L  +
Sbjct: 100 QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGE 158

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + +        +   G +P+V++Y  ++  L K+  + GA  +  EM  +G   N V Y
Sbjct: 159 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSY 218

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             +I    + G     +++ ER        P V  YN +INGLCK   +   +E+   M 
Sbjct: 219 TTVISSMCEVGMVKEGRQLAERF------EPVVSVYNALINGLCKERDYKGGVELMSEMV 272

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           +     +  +Y + I+ L  +G +E A  +  +M++ G   +  T ++++ G    G   
Sbjct: 273 EKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTF 332

Query: 294 ECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +  ++W  M R   L  NVV+YN L++G   +G +D+A+S++  + E  C+ +  T+G L
Sbjct: 333 DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL 392

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           ING  K G L  A+ I N++   G                   +  +A SL+  M K  C
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENC 452

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEAY 453
             +  T N+ + G   A +L+ A  +F++M ++  C P +V+YN L++GL K  R  EAY
Sbjct: 453 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAY 512

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +E+  +G +    TY+ L++G C +    +AL+L  + +  G +PD    N++I   
Sbjct: 513 GLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572

Query: 514 CSAGKVEDALQLYSNMK--KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           C  GK E A+Q+   +   +R   P++++Y  ++ GL ++   +  + ++  ++ ER+ P
Sbjct: 573 CKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 244/543 (44%), Gaps = 30/543 (5%)

Query: 106 EAGILCRKRQ---FEKAKRFLNSLWEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           E+ +L R RQ      A  F  S+    L K    ++  +I  L   G +     +  +M
Sbjct: 42  ESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM 101

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             +G   +   +  +I  + + G   RA E++ R + E    P+V  YN +++ L    R
Sbjct: 102 KLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGENR 160

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                 ++  MK++  E + FTY   +  LCK   V+GA+++  EM   G   +AV+Y  
Sbjct: 161 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTT 220

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKN 340
           +I   C  G +KE  +L E         VVS YN LI GL +       + +   + EK 
Sbjct: 221 VISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKG 275

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAA 383
            + +  ++  LIN L  +G +  A  +L ++ + G                  G   DA 
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335

Query: 384 SLVNRMDK-HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            + N+M +  G + N    N+L+ GF     ++ A+ +F  M   GCSP + +Y +LING
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
             K      A     +ML  G  P+++ Y+ ++  LC+  K   A  L     ++   P 
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPS 455

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKR-NCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           V  +N  I GLC AG+++ A +++  M+++  C PN+VTYN L+DGL K    ++A  + 
Sbjct: 456 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLT 515

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             I    +     +YN  L G C+      A + +   +  G  P  IT ++++ A    
Sbjct: 516 REIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQ 575

Query: 622 GAS 624
           G +
Sbjct: 576 GKA 578


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 257/527 (48%), Gaps = 41/527 (7%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
               A+RF +S+   G+ P+VY+Y  ++  L   G    AL++  +M   G   NVV YN
Sbjct: 170 SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 229

Query: 175 ILIDGFFKKGDYMRAKEIWERLV---METSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            L+  FF+ G+   A    ERLV    E  + PN+VT+N M+NG+CK G+ ++  +++D 
Sbjct: 230 TLVAAFFRAGEVDGA----ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 285

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +     D  +Y + + G CKAG    A  V+ EM + GI  D VT+ ++I   C+AG 
Sbjct: 286 MVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 345

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++    L   M  +G  +N V++  LI G  + G +D+A+     +++         +  
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LING C  G +++A ++L+E                  M+  G K +  T +++++ + +
Sbjct: 406 LINGYCMVGRMDEARELLHE------------------MEAKGLKPDVVTYSTIISAYCK 447

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                +A  L ++M  KG  P  ++Y++LI  LC  +R  +A+   K M++ G +PD  T
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI+G C+   ++ AL L  + ++ G  PDV  Y++LI+GL  + +  +A QL   + 
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 567

Query: 531 KRNCVPNLVTYNTLM---------------DGLFKTGDCDKALEIWNHILEERLRPDIIS 575
             + +P    Y+ LM                G    G  ++A +++  +L+     D   
Sbjct: 568 HEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 627

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y++ + G C    +  A  F    L  G  P + +   L+R +  NG
Sbjct: 628 YSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENG 674



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/475 (32%), Positives = 233/475 (49%), Gaps = 27/475 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V +Y  V+  L     L  A   FD M   GV  NV  YNIL+     +G    A
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             I  R +      PNVVTYN ++    + G  D    +   M++   + +  T+ S ++
Sbjct: 210 LSIL-RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G+CKAG +E A +V+ EMV  G+  D V+YN ++ G+C+AG   E   ++  M +KG + 
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV++  LI  + + G ++ A+++   +RE+    +  T   LI+G CK G+L+      
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD------ 382

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                       DA   V  M +   K +    N+L+NG+    +++ A  L  EM  KG
Sbjct: 383 ------------DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+Y+T+I+  CK      A+   ++MLEKG  PD ITYS LI  LC  K++  A 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L    ++ G  PD   Y  LI G C  G VE AL L+  M K   +P++VTY+ L++GL
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            K+    +A ++   +  E    D I  N     L  C R ++    L  AL +G
Sbjct: 551 SKSARAMEAQQLLFKLYHE----DPIPANTKYDALMHCCRKAELKSVL--ALLKG 599



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 248/491 (50%), Gaps = 38/491 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +   ++A   L  +   G  P+V +Y T++    ++G++ GA  +   M E G++ N
Sbjct: 200 LCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPN 259

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V +N +++G  K G    A+++++ +V E  + P+ V+YN ++ G CK G   E L ++
Sbjct: 260 LVTFNSMVNGMCKAGKMEDARKVFDEMVRE-GLAPDGVSYNTLVGGYCKAGCSHEALSVF 318

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  T+ S IH +CKAGN+E A  + R+M E G+ ++ VT+ A+IDGFC+ 
Sbjct: 319 AEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKK 378

Query: 290 GKIKECFELWEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           G + +   L  V G K C    +VV YN LI G    G++DEA  +   +  K    D  
Sbjct: 379 GFLDDA--LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 436

Query: 347 THGVLINGLCKNGYLNKAIQILNE-VEEG----------------GEGRLADAASLVNRM 389
           T+  +I+  CKN   + A ++  + +E+G                GE RL+DA  L   M
Sbjct: 437 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K G + + +T  SL++G  +   +E+A+ L  +M + G  P VV+Y+ LINGL K  R 
Sbjct: 497 IKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 556

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLIN---------------GLCQSKKIDMALKLCCQF 494
            EA   + ++  +   P    Y  L++               G C    ++ A K+    
Sbjct: 557 MEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 616

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L + +  D ++Y++LIHG C AG V  AL  +  M +    PN  +  +L+ GLF+ G  
Sbjct: 617 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMV 676

Query: 555 DKALEIWNHIL 565
            +A ++   +L
Sbjct: 677 VEADQVIQQLL 687



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 176/349 (50%), Gaps = 20/349 (5%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G     + YNA++     A  +      ++ M   G   NV +YNIL+R L   G   EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +SI   +R   C  +  T+  L+    + G ++ A +++  + EGG              
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG-------------- 255

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
                K N  T NS++NG  +A K+E+A  +F EM R+G +P  VSYNTL+ G CK    
Sbjct: 256 ----LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA S   EM +KG  PD++T++ LI+ +C++  ++ A+ L  Q  ++G   +   +  L
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G C  G ++DAL     MK+    P++V YN L++G    G  D+A E+ + +  + L
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +PD+++Y+  +   C       AFE     L +G+LP  IT+  L+R +
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 480



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 212/434 (48%), Gaps = 11/434 (2%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C+     +A      + +KG+ PDV ++ ++I+ + K+G+L  A+ +  +M ERG++
Sbjct: 303 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQ 362

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V +  LIDGF KKG ++    +  R + +  + P+VV YN +ING C  GR DE  E
Sbjct: 363 MNEVTFTALIDGFCKKG-FLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARE 421

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   M+    + D  TY + I   CK  +   A  + ++M+E G+  DA+TY+++I   C
Sbjct: 422 LLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 481

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
              ++ +   L++ M + G   +  +Y  LI G  + G V+ A+S+ + + +     D  
Sbjct: 482 GEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVV 541

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK--HGC-KLNAYTCNS 403
           T+ VLINGL K+    +A Q+L ++         D      + D   H C K    +  +
Sbjct: 542 TYSVLINGLSKSARAMEAQQLLFKLYH------EDPIPANTKYDALMHCCRKAELKSVLA 595

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ GF     +  A  +++ M  +  +     Y+ LI+G C+     +A SF K+ML+ G
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P+  +   LI GL ++  +  A ++  Q L      D      LI    + G V+  L
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVL 715

Query: 524 QLYSNMKKRNCVPN 537
            +   M K   +P+
Sbjct: 716 DVLHGMAKDGLLPS 729



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 30/307 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I AY KN     A ++ Q+M E         +     +LC +++   A     ++ + 
Sbjct: 440 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKL 499

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL+PD ++Y ++I+G  K G++  AL++ D+M + GV  +VV Y++LI+G  K    M A
Sbjct: 500 GLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 559

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++  +L  E  +  N                       +D +    R+ +  +  + + 
Sbjct: 560 QQLLFKLYHEDPIPANT---------------------KYDALMHCCRKAELKSVLALLK 598

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
           G C  G +  A++VY+ M++    +D   Y+ +I G CRAG + +     + M + G   
Sbjct: 599 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAP 658

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  S   LIRGL ENG V EA  + + L      AD+     LI+     G ++  + +L
Sbjct: 659 NSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVL 718

Query: 369 NEVEEGG 375
           + + + G
Sbjct: 719 HGMAKDG 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 1/162 (0%)

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G+ P ++ Y+ ++  L  +  +  A +     L  G  P+V  YNIL+  LC  G  ++A
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L +  +M+   C PN+VTYNTL+   F+ G+ D A  +   + E  L+P+++++N  + G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +C   +M DA +  ++ +  G+ P  ++++ LV      G S
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 244/486 (50%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +SY  VI G+ ++G    A+ VFDEM ER V  N + YN +IDG  K GD      +
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++V    + PN +TYNV+++GLC+ GR  E   + D M   +   D FTY     GL 
Sbjct: 121 RDQMVCH-GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-V 311
           + G+ +    ++ + +++G+ +   T + +++G C+ GK+    E+ + +   G +   V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G+++ A S +  ++ ++   D  T+  LINGLCK              
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK-------------- 285

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R+ +A  L+  M  +G      T N+L++ + +  +LE    +  EM   G  P
Sbjct: 286 ----AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY +++N  CK  +  EA + + +M  K   P+   Y+ +I+   +    D A  L 
Sbjct: 342 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 401

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G +P +  YN+LI GLC+  ++ +A ++ +++     +P+ V+YNTL+      
Sbjct: 402 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 461

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ DKAL++   + +  ++  + +Y+  + GL    R+++        +   ++P+    
Sbjct: 462 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 521

Query: 612 HILVRA 617
           +I+V A
Sbjct: 522 NIMVEA 527



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 232/462 (50%), Gaps = 19/462 (4%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
            F  +   G   +   +N  +      GD   A  +  R+  + +  PN  +YNV+I G+
Sbjct: 14  AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 73

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            + GR  + +E++D M +     +  TY + I G  K G++E   R+  +MV  G+  +A
Sbjct: 74  WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 133

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           +TYN ++ G CRAG++ E   L + M  +K   +  +Y+IL  GL  NG     +S++  
Sbjct: 134 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
             +        T  +L+NGLCK+G ++ A ++L               SLVN     G  
Sbjct: 194 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ--------------SLVNA----GLV 235

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                 N+L+NG+ Q  +LE A   F +M  +   P  ++YN LINGLCK ER   A   
Sbjct: 236 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 295

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + EM + G  P + T++ LI+   ++ +++    +  +  + G  P+V  Y  +++  C 
Sbjct: 296 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK+ +A+ +  +M  ++ +PN   YN ++D   + G  D+A  +   +    + P I++
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           YN+ +KGLC+ S++S+A E +N      ++P  ++++ L+ A
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 457



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 203/426 (47%), Gaps = 21/426 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L+ +  + + PD ++Y  + +GL ++GD    L++F +  + GV   
Sbjct: 143 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 202

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G    A+E+ + LV    + P  V YN +ING C+ G  +     +
Sbjct: 203 DYTCSILLNGLCKDGKVSIAEEVLQSLV-NAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK    + D  TY + I+GLCKA  +  A+ +  EM ++G+     T+N +ID + R 
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 321

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M   G   NVVSY  ++    +NGK+ EA++I + +  K+   ++  +
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+   ++G  ++A                    LV +M  +G   +  T N L+ G 
Sbjct: 382 NAIIDAYVEHGPNDQAF------------------ILVEKMKSNGISPSIVTYNLLIKGL 423

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              S++  A  +   +S     P  VSYNTLI+  C      +A    + M + G K  +
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 483

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY  LI+GL  + +++    L  + +Q    P   ++NI++      G    A  L   
Sbjct: 484 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 543

Query: 529 M-KKRN 533
           M +KRN
Sbjct: 544 MLQKRN 549



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 55/374 (14%)

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-- 308
           L   G      R +  +  +G   D   +N  +     AG + E   +   MGR G    
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  SYN++I G+            W                                   
Sbjct: 62  NAFSYNVVIAGM------------WR---------------------------------- 75

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR  DA  + + M +     N  T N++++G I+   LE    L  +M   G
Sbjct: 76  -------AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  ++YN L++GLC+  R GE  + + EM  +   PD  TYS+L +GL ++      L
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  ++L+ G T      +IL++GLC  GKV  A ++  ++     VP  V YNTL++G 
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            +TG+ + A   +  +    ++PD I+YN  + GLC   R+++A + L +    G+ PT 
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 609 ITWHILVRAVMNNG 622
            T++ L+ A    G
Sbjct: 309 ETFNTLIDAYGRTG 322



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           F  +  R I P  + + + I  L + ++    +D+ +  +Q  G N      ++ F  + 
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME-MQDNGVNP----TVETFNTLI 315

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           + +G       R  Q EK    L+ + E GLKP+V SYG+++N   K+G +  A+A+ D+
Sbjct: 316 DAYG-------RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           MF + V  N   YN +ID + + G   +A  + E++     + P++VTYN++I GLC   
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQS 427

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           +  E  E+ + +  +    D+ +Y + I   C  GN++ A  + + M + GI     TY+
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 487

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVS----YNILIRGLLENGKVDEAISIWELL 336
            +I G   AG++ E   L++ M +    NVV     +NI++    + G   +A  + + +
Sbjct: 488 QLISGLGGAGRLNEMEYLYQKMMQN---NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544

Query: 337 REKNCNADST 346
            +K  N D T
Sbjct: 545 LQKRNNHDDT 554



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 1/167 (0%)

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP-DVTMYNILIHGLCSAG 517
           +   G +PD   ++  +     +  +  A+ +  +  + G  P +   YN++I G+  AG
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +  DA++++  M +R  +PN +TYNT++DG  K GD +    + + ++   L+P+ I+YN
Sbjct: 78  RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + L GLC   RM +    L++   + ++P   T+ IL   +  NG S
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 247/510 (48%), Gaps = 21/510 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVC 172
           R  + A    N +  +   P +  +  +++ +V+      A+    +  E  G+  N   
Sbjct: 69  RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
            NILI+ F           +  + V++  + P ++T+  +INGLCK G F + LE++D M
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAK-VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM 187

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                + D +TY + I+GLCK G    A  + ++M E G   D VTY+ +ID  C+   +
Sbjct: 188 VARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLV 247

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +++  M  KG    VVSY  LI+GL    +  EA ++   +   N   D  T  +L
Sbjct: 248 NEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLL 307

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+  CK                  EG + +A  ++  M + G + N  T NSLM+G+   
Sbjct: 308 IDIFCK------------------EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            ++  A  LF  M  +GC P V SY+ LING C V+R  EA     EM+ +G  P+ ++Y
Sbjct: 350 MEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSY 409

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+  CQ  K+  A +L       G+ PD+  Y++L+ G C  G +  A +L+  M+ 
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               PNLV Y  L+D + K+G+ + A ++++ +    L+PD+  Y   + GLC    + +
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNN 621
           A E        G  P   ++++++R  + +
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQH 559



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 224/470 (47%), Gaps = 19/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           ALA F+ M  R     ++ +N L+    +   Y  A     + +    + PN  T N++I
Sbjct: 74  ALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILI 133

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C     D    +  ++ K   +    T+ + I+GLCKAG    A  ++ +MV  G  
Sbjct: 134 NCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQ 193

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D  TY  +I+G C+ G+      L + MG  GC  +VV+Y+ LI  L ++  V+EA+ I
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  ++ K  +    ++  LI GLC                     R  +A++++N M   
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFS------------------RWKEASAMLNEMTSL 295

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               +  T + L++ F +   +  A  + K M+  G  P V++YN+L++G        EA
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M+ +G KPD+ +YS+LING C  K+ID A +L  + + +G TP+   Y  LIH 
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C  GK+ +A +L+ +M     +P+L TY+ L++G  K G   KA  ++  +    L+P+
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ Y I +  +C    ++ A +  ++    G+ P    +  ++  +   G
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 200/411 (48%), Gaps = 19/411 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F +A    + +  +G +PDVY+Y T+INGL K G+   A  +  +M E G + +
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LID   K      A +I+  +  +  + P VV+Y  +I GLC   R+ E   M 
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAK-GISPTVVSYTSLIQGLCSFSRWKEASAML 289

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       D  T+   I   CK GNV  A+ V + M E G+  + +TYN+++ G+   
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  +L++VM  +GC  +V SY+ILI G     ++DEA  ++  +  +    ++ ++
Sbjct: 350 MEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSY 409

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI+  C+ G L +A ++  ++   G                 +G L  A  L   M  
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
              K N      L++   ++  L +A  LF E+   G  P V  Y T+INGLCK     E
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           A    ++M E G  P+  +Y+++I G  Q K    A++L  +   KGF  D
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 178/357 (49%), Gaps = 14/357 (3%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T   L DS  ++     +  +F ++  + I P +V + S I  L    +    ++ +  +
Sbjct: 233 TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW---KEASAML 289

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
            +    N MPD  +  F  + +IF       C++    +A+  L ++ E G++P+V +Y 
Sbjct: 290 NEMTSLNIMPD--IVTFSLLIDIF-------CKEGNVLEAQGVLKTMTEMGVEPNVITYN 340

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           ++++G     +++ A  +FD M  RG + +V  Y+ILI+G+        AK+++  ++ +
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + PN V+Y  +I+  C+ G+  E  E++  M  N    D  TY   + G CK G +  
Sbjct: 401 -GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGK 459

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A R++R M  + +  + V Y  +ID  C++G +    +L+  +   G   +V  Y  +I 
Sbjct: 460 AFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIIN 519

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           GL + G +DEA+  +  + E  C  +  ++ V+I G  ++   ++A+Q++ E+ + G
Sbjct: 520 GLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 1/169 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  +  +A+     +   G  PD+ +Y  ++ G  K G L  A  +F  M    ++ N
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y ILID   K G+   A++++  L +   + P+V  Y  +INGLCK G  DE LE +
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVH-GLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            +M+++    + F+Y   I G  +  +   A ++  EM + G   D  T
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 286/611 (46%), Gaps = 47/611 (7%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
           P  A+ALF+  +R    AH P        R++ P L  H   IL       C        
Sbjct: 85  PALAVALFNRVSR----AHGP--------RVLSPTL--HTYGIL-----MDCCTRAHRPK 125

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +  +G+       +D     N + G CEA     KR  E     L+ +   G  PDV+
Sbjct: 126 LTLAFFGQVLKTGLGIDTIMISNLLRGLCEA-----KRTAEALDILLHRMPHLGCVPDVF 180

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVE--TNVVCYNILIDGFFKKGDYMRAKEIWE 194
           SY  V+  L        A  +   M E G     N V YN +IDGFFK+GD  +A +++ 
Sbjct: 181 SYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFN 240

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +V +  + P++ TYN ++N LCK    D+   +  +M       D++TY S I+G    
Sbjct: 241 EMV-QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G  + A RV ++M   GI  D VT N+++   C+ GKIK+  ++++ M  KG   ++ SY
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            I++ G    G + +   ++ L+       DS    VLI    K G L++A  I NE+ E
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              G + +  T ++++    +  K+++A+  F +M  +G +P++
Sbjct: 420 ------------------QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSI 461

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +Y+ LI G C      +A   V +M+ KG +PD+  ++ +IN LC+  ++  A  +   
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  G  P+V +YN L+ G C  GK+E+AL+++  M      PN+V Y TL++G  K G 
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+ L ++  IL + ++P    YNI L GL    R   A    ++    GI     T+ I
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641

Query: 614 LVRAVMNNGAS 624
           ++  +  N  S
Sbjct: 642 VLGGLFKNSCS 652


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 272/531 (51%), Gaps = 20/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+K         L  + E+G  P   ++ +VI   V  G+++ AL + +EM   G   N
Sbjct: 265 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMN 324

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V    L+ G+  +G+   A  ++ + + E  ++PN VTY+V+I G C  G  ++  E++
Sbjct: 325 LVVATSLMKGYCAQGNLDSALNLFNK-ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 383

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK N      F   S + G  KA   E A +++ E V+ G+  +  TYN M+   C+ 
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKG 442

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E   L + M  +G + NVVSYN +I G    G +D A S++  +  ++   +  T+
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 502

Query: 349 GVLINGLCKNGYLNKAIQIL---------------NEVEEG--GEGRLADAASLVNRMDK 391
            +LI+G  K G   KA+ +                N +  G    G++++A   +    +
Sbjct: 503 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 562

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T NS+++GFI+   +++A+ +++EM   G SP VV+Y +LING CK  R   
Sbjct: 563 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 622

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM EKG + D+  YS LI+G C+ + ++ A  L  + L+ G +P+  +YN +I 
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G      +E AL  Y  M       +L TY TL+DGL K G    A +++  +L + + P
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DII++++ + GLC+  ++ +A + L +   + + P+ + ++ L+      G
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 793



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/584 (26%), Positives = 292/584 (50%), Gaps = 44/584 (7%)

Query: 16  KNPHTALAL-FDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           K P++ L L      +E G+  S   F  ++   +    +V   R+ E  E+  C  P +
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE--EMINCGKPMN 324

Query: 75  --VALSVIQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKA 119
             VA S+++ Y      D AL++F ++ E             I GC     C     EKA
Sbjct: 325 LVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC-----CNSGNIEKA 379

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                 +   G+ P V++  +++ G +K+     A  +FDE  + GV  N+  YNI++  
Sbjct: 380 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSW 438

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K G    A  + + +V +  V PNVV+YN MI G C+ G  D    ++  M   + + 
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 497

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY   I G  K G+ E A  ++ +M+   I     T+N +I+G C+ G++ E  +  
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           +    +G + + ++YN ++ G ++ G +D A++++  + E   + +  T+  LING CK+
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 617

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
             ++ A++  +E+ E                   G +L+    ++L++GF +   +E+A 
Sbjct: 618 NRIDLALKTRDEMRE------------------KGLELDVTAYSALIDGFCKRRDMESAQ 659

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF E+   G SP  + YN++I+G   +     A  + K+M+      D+ TY+ LI+GL
Sbjct: 660 DLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGL 719

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +  ++  A  L  + L KG  PD+  +++L++GLC+ G++E+A ++   M ++N  P++
Sbjct: 720 LKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSV 779

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           + YNTL+ G F+ G+  +A  + + +L+  L PD ++Y+I + G
Sbjct: 780 LIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 176/693 (25%), Positives = 310/693 (44%), Gaps = 94/693 (13%)

Query: 17  NPHTALALFDSATREPGY--------------AHSPHLFHH---ILRRLI----DPKLVV 55
           +P +AL  F  A  + G+                SP    H   +L R +    DP  VV
Sbjct: 73  DPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVV 132

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------ 109
            V  ++   +         V   ++ AY + +  + A+D F  M     C+  I      
Sbjct: 133 FVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAM----ICQDVIPWVPYM 188

Query: 110 ------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                 L R+    + +   N +  +G+  D ++   ++   +K G +  A   F E  E
Sbjct: 189 NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE 248

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           RGV+ +   Y+I+I    KK +     E+ E +  E    P+  T+  +I      G   
Sbjct: 249 RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM-KERGWVPSEATFTSVIVACVAQGNMV 307

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E L + + M    +  +     S + G C  GN++ A  ++ ++ E G+F + VTY+ +I
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G C +G I++  EL+  M   G   +V + N L+RG L+    +EA  +++     +C 
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD--EAVDCG 425

Query: 343 -ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
            A+  T+ ++++ LCK G +++A  +L+ +   G                 +G +  A+S
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           + + M     K N  T + L++G  +    E A+ LF +M     +PT  ++NT+INGLC
Sbjct: 486 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545

Query: 445 KVERFGEAYSFVKEMLEKGW-----------------------------------KPDMI 469
           KV +  EA   +K  LE+G+                                    P+++
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING C+S +ID+ALK   +  +KG   DVT Y+ LI G C    +E A  L+  +
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN + YN+++ G     + + AL  +  ++ +R+  D+ +Y   + GL    R+
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             A +   + L +GI+P  IT+H+LV  + N G
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 758



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 22/339 (6%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +K   EKA    + +    + P  +++ T+INGL K G +  A        E G   + +
Sbjct: 511 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN ++DGF K+G+   A  ++ R + E  V PNVVTY  +ING CK  R D  L+  D 
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVY-REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 629

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++   E D   Y + I G CK  ++E A+ ++ E++E G+  + + YN+MI GF     
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689

Query: 292 IKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++     ++ M   R  C ++ +Y  LI GLL+ G++  A  ++  +  K    D  T  
Sbjct: 690 MEAALVWYKKMINDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 748

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VL+NGLC  G L  A +IL E                  MD+     +    N+L+ G+ 
Sbjct: 749 VLVNGLCNKGQLENARKILEE------------------MDRKNMTPSVLIYNTLIAGYF 790

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           +   L+ A  L  EM  +G  P  V+Y+ LING  K +R
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 201/465 (43%), Gaps = 41/465 (8%)

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
           F RGV+   V  +IL+      G    A+++  R V   S    VV  + +IN  C   R
Sbjct: 90  FIRGVDAYCVLLHILMRSPETHG---HARKLLNRYVSGDSDPSPVVFVDHLIN--C-AKR 143

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           FD              E D   +   ++   +A  +E A   +  M+   +       N 
Sbjct: 144 FD-------------FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 190

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++    R   I E  +L+  M  +G   +  + ++++R  L+ G+V+EA   +   +E+ 
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              D+  + ++I  +CK    N  +++L E++E                   G   +  T
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE------------------RGWVPSEAT 292

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             S++   +    +  A+ L +EM   G    +V   +L+ G C       A +   ++ 
Sbjct: 293 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 352

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G  P+ +TYS+LI G C S  I+ A +L  Q    G  P V   N L+ G   A   E
Sbjct: 353 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 412

Query: 521 DALQLYSNMKKRNC-VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           +A +L+   +  +C V N+ TYN +M  L K G  D+A  + ++++ + + P+++SYN  
Sbjct: 413 EASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + G C    M  A    +D L R + P  +T+ IL+      G S
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K Q E A++ L  +  K + P V  Y T+I G  + G+L  A  + DEM +RG+  +
Sbjct: 754 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 813

Query: 170 VVCYNILIDGFFKKGD 185
            V Y+ILI+G F KGD
Sbjct: 814 DVTYDILINGKF-KGD 828


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 272/531 (51%), Gaps = 20/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+K         L  + E+G  P   ++ +VI   V  G+++ AL + +EM   G   N
Sbjct: 305 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMN 364

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V    L+ G+  +G+   A  ++ + + E  ++PN VTY+V+I G C  G  ++  E++
Sbjct: 365 LVVATSLMKGYCAQGNLDSALNLFNK-ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 423

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK N      F   S + G  KA   E A +++ E V+ G+  +  TYN M+   C+ 
Sbjct: 424 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKG 482

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E   L + M  +G + NVVSYN +I G    G +D A S++  +  ++   +  T+
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 542

Query: 349 GVLINGLCKNGYLNKAIQIL---------------NEVEEG--GEGRLADAASLVNRMDK 391
            +LI+G  K G   KA+ +                N +  G    G++++A   +    +
Sbjct: 543 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 602

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T NS+++GFI+   +++A+ +++EM   G SP VV+Y +LING CK  R   
Sbjct: 603 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 662

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM EKG + D+  YS LI+G C+ + ++ A  L  + L+ G +P+  +YN +I 
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G      +E AL  Y  M       +L TY TL+DGL K G    A +++  +L + + P
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DII++++ + GLC+  ++ +A + L +   + + P+ + ++ L+      G
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 833



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/584 (26%), Positives = 292/584 (50%), Gaps = 44/584 (7%)

Query: 16  KNPHTALAL-FDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           K P++ L L      +E G+  S   F  ++   +    +V   R+ E  E+  C  P +
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE--EMINCGKPMN 364

Query: 75  --VALSVIQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKA 119
             VA S+++ Y      D AL++F ++ E             I GC     C     EKA
Sbjct: 365 LVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC-----CNSGNIEKA 419

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                 +   G+ P V++  +++ G +K+     A  +FDE  + GV  N+  YNI++  
Sbjct: 420 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSW 478

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K G    A  + + +V +  V PNVV+YN MI G C+ G  D    ++  M   + + 
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 537

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY   I G  K G+ E A  ++ +M+   I     T+N +I+G C+ G++ E  +  
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           +    +G + + ++YN ++ G ++ G +D A++++  + E   + +  T+  LING CK+
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 657

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
             ++ A++  +E+ E                   G +L+    ++L++GF +   +E+A 
Sbjct: 658 NRIDLALKTRDEMRE------------------KGLELDVTAYSALIDGFCKRRDMESAQ 699

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF E+   G SP  + YN++I+G   +     A  + K+M+      D+ TY+ LI+GL
Sbjct: 700 DLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGL 759

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +  ++  A  L  + L KG  PD+  +++L++GLC+ G++E+A ++   M ++N  P++
Sbjct: 760 LKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSV 819

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           + YNTL+ G F+ G+  +A  + + +L+  L PD ++Y+I + G
Sbjct: 820 LIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 176/693 (25%), Positives = 310/693 (44%), Gaps = 94/693 (13%)

Query: 17  NPHTALALFDSATREPGY--------------AHSPHLFHH---ILRRLI----DPKLVV 55
           +P +AL  F  A  + G+                SP    H   +L R +    DP  VV
Sbjct: 113 DPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVV 172

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------ 109
            V  ++   +         V   ++ AY + +  + A+D F  M     C+  I      
Sbjct: 173 FVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAM----ICQDVIPWVPYM 228

Query: 110 ------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                 L R+    + +   N +  +G+  D ++   ++   +K G +  A   F E  E
Sbjct: 229 NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE 288

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           RGV+ +   Y+I+I    KK +     E+ E +  E    P+  T+  +I      G   
Sbjct: 289 RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM-KERGWVPSEATFTSVIVACVAQGNMV 347

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E L + + M    +  +     S + G C  GN++ A  ++ ++ E G+F + VTY+ +I
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G C +G I++  EL+  M   G   +V + N L+RG L+    +EA  +++     +C 
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD--EAVDCG 465

Query: 343 -ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
            A+  T+ ++++ LCK G +++A  +L+ +   G                 +G +  A+S
Sbjct: 466 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 525

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           + + M     K N  T + L++G  +    E A+ LF +M     +PT  ++NT+INGLC
Sbjct: 526 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 585

Query: 445 KVERFGEAYSFVKEMLEKGW-----------------------------------KPDMI 469
           KV +  EA   +K  LE+G+                                    P+++
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING C+S +ID+ALK   +  +KG   DVT Y+ LI G C    +E A  L+  +
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN + YN+++ G     + + AL  +  ++ +R+  D+ +Y   + GL    R+
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             A +   + L +GI+P  IT+H+LV  + N G
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 798



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 22/339 (6%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +K   EKA    + +    + P  +++ T+INGL K G +  A        E G   + +
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN ++DGF K+G+   A  ++ R + E  V PNVVTY  +ING CK  R D  L+  D 
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVY-REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 669

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++   E D   Y + I G CK  ++E A+ ++ E++E G+  + + YN+MI GF     
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729

Query: 292 IKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++     ++ M   R  C ++ +Y  LI GLL+ G++  A  ++  +  K    D  T  
Sbjct: 730 MEAALVWYKKMINDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 788

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VL+NGLC  G L  A +IL E                  MD+     +    N+L+ G+ 
Sbjct: 789 VLVNGLCNKGQLENARKILEE------------------MDRKNMTPSVLIYNTLIAGYF 830

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           +   L+ A  L  EM  +G  P  V+Y+ LING  K +R
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 204/465 (43%), Gaps = 41/465 (8%)

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
           F RGV+   V  +IL+      G    A+++  R V   S    VV  + +IN  C   R
Sbjct: 130 FIRGVDAYCVLLHILMRSPETHG---HARKLLNRYVSGDSDPSPVVFVDHLIN--C-AKR 183

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           FD   E+  R+         F Y   ++   +A  +E A   +  M+   +       N 
Sbjct: 184 FD--FELDHRV---------FNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 230

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++    R   I E  +L+  M  +G   +  + ++++R  L+ G+V+EA   +   +E+ 
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 290

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              D+  + ++I  +CK    N  +++L E++E                   G   +  T
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE------------------RGWVPSEAT 332

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             S++   +    +  A+ L +EM   G    +V   +L+ G C       A +   ++ 
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G  P+ +TYS+LI G C S  I+ A +L  Q    G  P V   N L+ G   A   E
Sbjct: 393 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 452

Query: 521 DALQLYSNMKKRNC-VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           +A +L+   +  +C V N+ TYN +M  L K G  D+A  + ++++ + + P+++SYN  
Sbjct: 453 EASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + G C    M  A    +D L R + P  +T+ IL+      G S
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 555



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K Q E A++ L  +  K + P V  Y T+I G  + G+L  A  + DEM +RG+  +
Sbjct: 794 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 853

Query: 170 VVCYNILIDGFFKKGD 185
            V Y+ILI+G F KGD
Sbjct: 854 DVTYDILINGKF-KGD 868


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 278/572 (48%), Gaps = 31/572 (5%)

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           E++E+   + P + A+S ++    K    D A ++  ++          ++      LC+
Sbjct: 320 EMVELG--FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
               +KA+   +++    L+P+  +Y  +I+   +SG L  A++ FD M + G+   V  
Sbjct: 378 GGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI+G  K GD   A+ ++  +     V P   T+  +I+G CK  +  +  +++++M
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMT-NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
             N    + +T+ + I GLC    +  A  ++ E+VE  I    VTYN +I+G+CR GKI
Sbjct: 497 IDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKI 556

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            + FEL E M +KG + +  +Y  LI GL   G+V +A    + L ++N   +   +  L
Sbjct: 557 DKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSAL 616

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-------EGRLADAA----------SLVNRMDKHGC 394
           ++G C+ G L +A+    E+ + G          L D A           L+  M   G 
Sbjct: 617 LHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL 676

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + +     S+++ + +    + A   +  M  + C P VV+Y  L+NGLCK      A  
Sbjct: 677 RPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGL 736

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             K M      P+ ITY   ++ L +   +  A+ L    L KG   +   +NI+I G C
Sbjct: 737 LFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFC 795

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G+  +A ++ S M +    P+ VTY+TL+    ++G+   ++++W+ +L   L PD++
Sbjct: 796 KLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLV 855

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           +YN+ + G C    +  AFE  +D L RGI+P
Sbjct: 856 AYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 253/502 (50%), Gaps = 31/502 (6%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           ++   L P+V +   ++NGL+K    +    +FDE    GV  +    + ++    +  D
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 186 YMRAKEI--WERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           ++RAKE   W    ME + +  ++VTYNV+I+GLCK  R  E +E+   +       D  
Sbjct: 241 FLRAKEKIRW----MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVV 296

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TYC+ + G C+    E   ++  EMVE G        + ++DG  + GKI + +EL   +
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           GR G + N+  YN LI  L + G +D+A  ++  +   N   +  T+ +LI+  C++G L
Sbjct: 357 GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           + AI                  S  +RM + G     Y  NSL+NG  +   L  A  LF
Sbjct: 417 DVAI------------------SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLF 458

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM+ KG  PT  ++ +LI+G CK  +  +A+    +M++ G  P++ T++ LI+GLC +
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K+  A +L  + +++   P    YN+LI G C  GK++ A +L  +M ++  VP+  TY
Sbjct: 519 NKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTY 578

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+ GL  TG   KA +  + + ++ ++ + + Y+  L G C   R+ +A     + + 
Sbjct: 579 RPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQ 638

Query: 602 RGILPTTITWHILVRAVMNNGA 623
           RG     I   ++  AV+ +GA
Sbjct: 639 RG-----INMDLVCHAVLIDGA 655



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 253/509 (49%), Gaps = 21/509 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR +QFE   + ++ + E G  P   +   +++GL K G +  A  +  ++   G   N
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN LI+   K GD  +A+ ++  + +  ++ PN +TY+++I+  C+ GR D  +  +
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSL-MNLRPNGITYSILIDSFCRSGRLDVAISYF 423

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DRM ++   +  + Y S I+G CK G++  AE ++ EM   G+   A T+ ++I G+C+ 
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++++ F+L+  M   G   NV ++  LI GL    K+ EA  +++ L E+       T+
Sbjct: 484 LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLI G C++G ++KA +                  L+  M + G   + YT   L++G 
Sbjct: 544 NVLIEGYCRDGKIDKAFE------------------LLEDMHQKGLVPDTYTYRPLISGL 585

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++  A     ++ ++      + Y+ L++G C+  R  EA S   EM+++G   D+
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + +++LI+G  +         L      +G  PD  +Y  +I      G  + A + +  
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M    C PN+VTY  LM+GL K G+ D+A  ++  +    + P+ I+Y   L  L     
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRA 617
           M +A   L+ A+ +G+L  T+T +I++R 
Sbjct: 766 MKEAIG-LHHAMLKGLLANTVTHNIIIRG 793



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 232/481 (48%), Gaps = 20/481 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  + + A  + + + + G+   VY+Y ++ING  K GDL  A ++F EM  +GVE  
Sbjct: 410 FCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPT 469

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +  LI G+ K     +A +++ +++ +  + PNV T+  +I+GLC   +  E  E++
Sbjct: 470 ATTFTSLISGYCKDLQVQKAFKLYNKMI-DNGITPNVYTFTALISGLCSTNKMAEASELF 528

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D + + + +    TY   I G C+ G ++ A  +  +M + G+  D  TY  +I G C  
Sbjct: 529 DELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCST 588

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  +  + + ++   LN + Y+ L+ G  + G++ EA+S    + ++  N D   H
Sbjct: 589 GRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCH 648

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            VLI+G  K         +L ++ + G                 EG    A    + M  
Sbjct: 649 AVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVT 708

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             C  N  T  +LMNG  +A +++ A  LFK M      P  ++Y   ++ L K     E
Sbjct: 709 EECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A      ML KG   + +T++++I G C+  +   A K+  +  + G  PD   Y+ LI+
Sbjct: 769 AIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIY 827

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C +G V  +++L+  M  R   P+LV YN L+ G    G+ DKA E+ + +L   + P
Sbjct: 828 EYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887

Query: 572 D 572
           D
Sbjct: 888 D 888



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 255/529 (48%), Gaps = 21/529 (3%)

Query: 103 FGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           + C A +  +C  + F +AK  +  +   G    + +Y  +I+GL K   +  A+ V   
Sbjct: 226 YTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRS 285

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +  +G+  +VV Y  L+ GF +   +    ++ + +V E    P     + +++GL K G
Sbjct: 286 LGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV-ELGFSPTEAAVSGLVDGLRKQG 344

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           + D+  E+  ++ +     + F Y + I+ LCK G+++ AE +Y  M    +  + +TY+
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREK 339
            +ID FCR+G++      ++ M + G    V +YN LI G  + G +  A S++  +  K
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
                +TT   LI+G CK+  + KA ++ N++ + G                   ++A+A
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           + L + + +   K    T N L+ G+ +  K++ A  L ++M +KG  P   +Y  LI+G
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC   R  +A  F+ ++ ++  K + + YS L++G CQ  ++  AL   C+ +Q+G   D
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  + +LI G       +    L  +M  +   P+ V Y +++D   K G   KA E W+
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            ++ E   P++++Y   + GLC    M  A           + P +IT+
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITY 753



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 220/462 (47%), Gaps = 20/462 (4%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           +  ++   V S  +  A+ +   MF   +   V   + L++G  K   ++   E+++  V
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               V P+  T + ++  +C+   F    E    M+ N  +    TY   IHGLCK   V
Sbjct: 218 -NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRV 276

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A  V R +   G+  D VTY  ++ GFCR  + +   +L + M   G      + + L
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           + GL + GK+D+A  +   +       +   +  LIN LCK G L+KA            
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA------------ 384

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                   L + M     + N  T + L++ F ++ +L+ AI  F  M + G   TV +Y
Sbjct: 385 ------ELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N+LING CK      A S   EM  KG +P   T++ LI+G C+  ++  A KL  + + 
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G TP+V  +  LI GLCS  K+ +A +L+  + +R   P  VTYN L++G  + G  DK
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           A E+   + ++ L PD  +Y   + GLCS  R+S A +F++D
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 232/523 (44%), Gaps = 38/523 (7%)

Query: 119 AKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A RF N L   K +     SY  +++ LV S     A ++   +  R      V  + L 
Sbjct: 86  ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFL- 144

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
                   Y R K            + + + +N+++       R  + + +   M  N  
Sbjct: 145 ------DSYKRCK------------FSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNL 186

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             +  T  + ++GL K         ++ E V +G+  D  T +A++   C         E
Sbjct: 187 LPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE 246

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
               M   G  L++V+YN+LI GL +  +V EA+ +   L  K   AD  T+  L+ G C
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           +       IQ+++E+ E G                 +G++ DA  LV ++ + G   N +
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N+L+N   +   L+ A  L+  MS     P  ++Y+ LI+  C+  R   A S+   M
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           ++ G    +  Y+ LING C+   +  A  L  +   KG  P  T +  LI G C   +V
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A +LY+ M      PN+ T+  L+ GL  T    +A E+++ ++E +++P  ++YN+ 
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++G C   ++  AFE L D   +G++P T T+  L+  + + G
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTG 589



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 183/405 (45%), Gaps = 63/405 (15%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P +V  +V I+ Y ++   DKA ++ + M++         +      LC   +  KAK F
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           ++ L ++ +K +   Y  +++G  + G L+ AL+   EM +RG+  ++VC+ +LIDG  K
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           + D     ++ + +  +  + P+ V Y  MI+   K G F +  E WD M   E   +  
Sbjct: 658 QPDRKTFFDLLKDM-HDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVV 716

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + ++GLCKAG ++ A  +++ M  + +  +++TY   +D   + G +KE   L   M
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM 776

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +    N V++NI+IRG  + G+  EA  +   + E     D  T+  LI   C++G + 
Sbjct: 777 LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVG 836

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
            ++++ +              +++NR                                  
Sbjct: 837 ASVKLWD--------------TMLNR---------------------------------- 848

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                G  P +V+YN LI G C      +A+    +ML +G  PD
Sbjct: 849 -----GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 245/483 (50%), Gaps = 20/483 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++ + A    + + EKG+ P + ++  +++  +K         ++ EMF   +++ V
Sbjct: 177 CELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTV 236

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI+I+   K+G   +AK+    +     V PNVVTYN +I+G C  GR +    + D
Sbjct: 237 YTFNIMINVLCKEGKLKKAKDFIGSM-ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK    E DS+TY S I G+CK G +E A  +  +M E G+   AVTYN +IDG+C  G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + + F   + M R+  L  VS YN+LI  L   GK+DEA  + + + +     DS T+ 
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LING C+ G   KA  + +E                  M   G +    T  SL+    
Sbjct: 416 ILINGYCRCGNAKKAFNLHDE------------------MISKGIQPTLVTYTSLIYVLS 457

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           + ++++ A  LF+++ R+G SP ++ +N LI+G C       A++ +KEM ++   PD +
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ L+ G C+  K++ A +L  +  ++G  PD   YN LI G    G + DA  +   M
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                 P L+TYN L+ GL K    D A E+   ++ + + PD  +Y   ++G+      
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDS 637

Query: 590 SDA 592
           S+A
Sbjct: 638 SEA 640



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 221/421 (52%), Gaps = 23/421 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC++ + +KAK F+ S+   G+KP+V +Y TVI+G    G + GA  V D M 
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RGVE +   Y  LI G  K G    A  I E++  E  + P  VTYN +I+G C  G  
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            +     D M +        TY   IH L   G ++ A+ + ++M +SGI  D++TYN +
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+CR G  K+ F L + M  KG    +V+Y  LI  L +  ++  A  ++E +  +  
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           + D      LI+G C NG L++A  +L E                  MDK     +  T 
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKE------------------MDKRNIVPDEVTY 519

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+LM G  +  K+E A  L KEM R+G  P  +SYNTLI+G  K     +A++   EML 
Sbjct: 520 NTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLS 579

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G+ P ++TY+ LI GLC++++ D+A +L  + + KG TPD + Y  LI G+   GKV+D
Sbjct: 580 IGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDD 636

Query: 522 A 522
           +
Sbjct: 637 S 637



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 218/433 (50%), Gaps = 18/433 (4%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           + ++++I   C+  R D+  E +D MK+        T+ + +    K    E    +Y E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M    I     T+N MI+  C+ GK+K+  +    M   G   NVV+YN +I G    G+
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
           V+ A  + ++++ +    DS T+G LI+G+CK G L +A  IL +++E G          
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  +G L  A    + M +        T N L++      K++ A  + K+M   G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  ++YN LING C+     +A++   EM+ KG +P ++TY+ LI  L +  ++  A 
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + +++G +PD+ M+N LI G C+ G ++ A  L   M KRN VP+ VTYNTLM G 
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            + G  ++A E+   +    +RPD ISYN  + G      ++DAF   ++ L  G  PT 
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTL 586

Query: 609 ITWHILVRAVMNN 621
           +T++ L++ +  N
Sbjct: 587 LTYNALIQGLCKN 599



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 240/474 (50%), Gaps = 24/474 (5%)

Query: 165 GVETNVVCYNILIDG--FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G ++++V +++LI      K+GD   A E ++ ++ E  V P + T+N M++   K  + 
Sbjct: 162 GTKSSIV-FDMLIRACCELKRGD--DAFECFD-MMKEKGVVPKIETFNAMLSLFLKLNQT 217

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           +    ++  M + + +   +T+   I+ LCK G ++ A+     M   G+  + VTYN +
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTV 277

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G+C  G+++    + ++M  +G   +  +Y  LI G+ + GK++EA  I E ++E   
Sbjct: 278 IHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGL 337

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
              + T+  LI+G C  G L KA    +E+                     EG++ +A  
Sbjct: 338 LPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           ++  M   G   ++ T N L+NG+ +    + A  L  EM  KG  PT+V+Y +LI  L 
Sbjct: 398 MIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  R   A    ++++ +G  PD+I ++ LI+G C +  +D A  L  +  ++   PD  
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN L+ G C  GKVE+A +L   MK+R   P+ ++YNTL+ G  K GD + A  I + +
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           L     P +++YN  ++GLC   +   A E L + + +GI P   T+  L+  +
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/123 (18%), Positives = 59/123 (47%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           T    ++++LI   C   + +DA + +  MK++  VP + T+N ++    K    +    
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  +   +++  + ++NI +  LC   ++  A +F+      G+ P  +T++ ++    
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282

Query: 620 NNG 622
           + G
Sbjct: 283 SRG 285


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 269/568 (47%), Gaps = 53/568 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR ++  +AK     + + GLKPD  +   +I+G ++ GD+   L + D M   G+  N
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVM------------------------------- 198
           ++ YN+LI G  K G   +A EI + ++                                
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 338

Query: 199 ---ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
              + ++ P+ V+Y  MINGLC C       ++ ++M  +  + +   Y + I G    G
Sbjct: 339 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 398

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYN 314
            +E A R+   M  SG+  D   YNA+I    +AGK++E    L E+ GR    + V++ 
Sbjct: 399 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
             I G  + GK+ EA   ++ + +     ++  + VLING  K G L +A+ I   +   
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 518

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR+ +A  + + + + G   + +T +SL++GF +  ++E A
Sbjct: 519 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 578

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM  KG +P +  YN L++GLCK      A      M EKG +PD +TYS +I+G
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+S+ +  A  L  +   KG  P   +YN L+HG C  G +E A+ L+  M ++     
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT 698

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           L ++NTL+DG  K+    +A +++  ++ +++ PD ++Y   +   C   +M +A     
Sbjct: 699 L-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757

Query: 598 DALCRGILPTTITWHILVRAVMNNGAST 625
           +   R ++  T+T+  L+      G S+
Sbjct: 758 EMQERNLIVDTVTYTSLMYGYNKLGQSS 785



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 251/501 (50%), Gaps = 23/501 (4%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           A D+F   N I  C    L +  + E+A  +L  +  +GLKPD  ++G  I G  K+G +
Sbjct: 416 APDIFC-YNAIISC----LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A   FDEM + G+  N   Y +LI+G FK G+ M A  I+ R +    V P+V T + 
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF-RHLHALGVLPDVQTCSA 529

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
            I+GL K GR  E L+++  +K+     D FTY S I G CK G VE A  ++ EM   G
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
           I  +   YNA++DG C++G I+   +L++ M  KG   + V+Y+ +I G  ++  V EA 
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG------------- 377
           S++  +  K     S  +  L++G CK G + KA+ +  E+ + G               
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYC 709

Query: 378 ---RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
              ++ +A+ L   M       +  T  ++++   +A K+E A  LFKEM  +      V
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y +L+ G  K+ +  E ++  ++M+ KG KPD +TY L+I   C+   +  A KL  + 
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + KG     T++++LI  LC    + +A +L   M +    P+L   +TL+    + G  
Sbjct: 830 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 889

Query: 555 DKALEIWNHILEERLRPDIIS 575
           D+A  ++  +    L PD  +
Sbjct: 890 DEATRVFEGVKSLGLVPDTTT 910



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 223/445 (50%), Gaps = 22/445 (4%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R L++L   G+ PDV +    I+GL+K+G +  AL VF E+ E+G+  +V  Y+ LI GF
Sbjct: 513 RHLHAL---GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K+G+  +A E+ + + ++  + PN+  YN +++GLCK G      +++D M +   E D
Sbjct: 570 CKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 628

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           S TY + I G CK+ NV  A  ++ EM   G+   +  YNA++ G C+ G +++   L+ 
Sbjct: 629 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 688

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
            M +KG    +S+N LI G  ++ K+ EA  +++ +  K    D  T+  +I+  CK   
Sbjct: 689 EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK--- 745

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G++ +A  L   M +    ++  T  SLM G+ +  +      L
Sbjct: 746 ---------------AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F++M  KG  P  V+Y  +I   CK +   EA+    E++ KG       + LLI  LC+
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            + +  A KL  +  + G  P +   + L+     AGK+++A +++  +K    VP+  T
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910

Query: 541 YNTLMDGLFKTGDCDKALEIWNHIL 565
              L++G     D + A  +   ++
Sbjct: 911 LIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 211/431 (48%), Gaps = 63/431 (14%)

Query: 91  KALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           +AL +F+ ++      ++  C A I  L +  + ++A +  + L EKGL PDV++Y ++I
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G  K G++  A  + DEM  +G+  N+  YN L+DG  K GD  RA+++++ +  E  +
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGL 625

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ VTY+ MI+G CK     E   ++  M     +  SF Y + +HG CK G++E A  
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW----------------------- 299
           ++REM++ G F   +++N +IDG+C++ KI+E  +L+                       
Sbjct: 686 LFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 744

Query: 300 -------------EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
                        E+  R   ++ V+Y  L+ G  + G+  E  +++E +  K    D  
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+G++I   CK   L +A ++ +EV   G                    L +A+ L++ M
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G K +   C++L+  F +A K++ A  +F+ +   G  P   +   L+NG       
Sbjct: 865 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 924

Query: 450 GEAYSFVKEML 460
            +A + +K+++
Sbjct: 925 EDARNLIKQLV 935



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 36/338 (10%)

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIW----------ELLR--------EKNCNADSTT 347
           G  + V ++ILI      G +DEA +++           L+R        EK    ++ T
Sbjct: 152 GGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYT 211

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + ++  GLC+   +N+A     E                  M K G K +   C++L++G
Sbjct: 212 YTIITAGLCRAKRMNEAKLTFEE------------------MQKTGLKPDYNACSALIDG 253

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F++   ++  + +   M   G    +++YN LI+GLCK  +  +A   +K M+  G KP+
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             T+ LLI G C+   +  AL+L  +  ++   P    Y  +I+GLC    +  A +L  
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      PN+V Y+TL+ G    G  ++A  + + +    + PDI  YN  +  L    
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +M +A  +L +   RG+ P  +T+   +      G  T
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 164/575 (28%), Positives = 280/575 (48%), Gaps = 60/575 (10%)

Query: 99  MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           M ++  C + +   CR  +  +A      ++E GL P+  SY T+IN L KSG ++ A  
Sbjct: 353 MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 412

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +  +M  RG+  ++V    ++DG FK G    A+E++E  +++ ++ PN VTY+ +++G 
Sbjct: 413 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET-ILKLNLAPNCVTYSALLDGY 471

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G+ +    +  +M+K     +  T+ S I+G  K G +  A  V REMV+  +  + 
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 277 VTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           + Y  +IDG+ +AG+     +   E+  R+   + V ++IL+  L   G++DEA S+   
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 591

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--------------GEGRLA- 380
           +  K  + D   +  LI+G  K G    A+ I+ E++E               G  RL  
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651

Query: 381 -DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            D   + +RM + G   +  T N+++N +    K E+A+ +  EM   G  P  V+YN L
Sbjct: 652 YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711

Query: 440 INGLCKV---------ERFGEAYS---------------------------FVKEMLEKG 463
           I GLCK          +   +AYS                            + EM+++G
Sbjct: 712 IGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRG 771

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG----KV 519
              D++TY+ LI G C    ++ ALK   Q    G  P++T YN L+ GL +AG     +
Sbjct: 772 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMM 831

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E+  +L S M +R  VPN  TY+ L+ G  + G+  K + +   ++ +   P + +YN+ 
Sbjct: 832 EETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVL 891

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           +       +M +A E LND L +G +P + T+ IL
Sbjct: 892 ISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 269/587 (45%), Gaps = 79/587 (13%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE------- 163
           C      +A   + + W   +K D+ +Y T++    K+GDL  A ++F+E+         
Sbjct: 243 CEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 164 ------------RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
                       + ++  +V Y  LI  + K      +  ++++++M   + P+VVT + 
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMN-GIMPDVVTCSS 361

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ G C+ G+  E   ++  M +   + +  +Y + I+ L K+G V  A  +  +MV  G
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           I  D VT   ++DG  + GK KE  E++E ++      N V+Y+ L+ G  + GK++ A 
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE----------------- 373
            + + + +++   +  T   +ING  K G L+KA+ +L E+ +                 
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541

Query: 374 --GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
              GE  +AD       M     + +    + L+N   +  +++ A  L  +M  KG  P
Sbjct: 542 FKAGEQDVAD--DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP 599

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V+Y +LI+G  K      A S V+EM EK  + D++ Y+ LI GL +  K D    +C
Sbjct: 600 DIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVC 658

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + ++ G  PD   YN +I+  C  GK EDAL + + MK    +PN VTYN L+ GL KT
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718

Query: 552 G-------------------DCDKALEIWNH-------------ILEERLR----PDIIS 575
           G                     DK L+I                +L+E ++     D+++
Sbjct: 719 GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVT 778

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           YN  ++G C+ S +  A +  +     GI P   T++ L+  + N G
Sbjct: 779 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 825



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 270/567 (47%), Gaps = 73/567 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+K   ++    L+ + ++GL  D  +   ++ G  + G +  A  V   + + GV  +
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKD 231

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR-------F 222
           V+  N LIDG+ +     +A E+ E     + V  ++VTYN ++   CK G        F
Sbjct: 232 VIGLNTLIDGYCEAVLMSQATELIEN-SWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF 290

Query: 223 DECLEMW---DRMKKNE---------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           +E L  W   DR+K N+          +    TY + I   CK   VE +  +Y++M+ +
Sbjct: 291 NEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMN 350

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           GI  D VT ++++ GFCR GK+ E   L+  M   G   N VSY  +I  L ++G+V EA
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            ++   +  +  + D  T   +++GL K                   G+  +A  +   +
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFK------------------VGKTKEAEEVFETI 452

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K     N  T ++L++G+ +  K+E A  + ++M ++   P V++++++ING  K    
Sbjct: 453 LKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGML 512

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A   ++EM+++   P+ I Y++LI+G  ++ + D+A   C +   +       +++IL
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           ++ L   G++++A  L  +M  +   P++V Y +L+DG FK G+   AL I   + E+ +
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 570 RPDIISYNITLKGLCS---------CSRM-------------------------SDAFEF 595
           R D+++YN  +KGL           CSRM                          DA + 
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDI 692

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           LN+    GI+P  +T++IL+  +   G
Sbjct: 693 LNEMKSYGIMPNAVTYNILIGGLCKTG 719



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 241/527 (45%), Gaps = 53/527 (10%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F  A    + +   GL P +  + T++     SG +     ++ +M   GV  +V   N
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 175 ILIDGFFKKGD------YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +L+    K GD      Y+R  ++         V  + VTYN +I G C+ G  D+   +
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDV---------VDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M K     DS T    + G C+ G V+ AE V   +V+ G+  D +  N +IDG+C 
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELL---------- 336
           A  + +  EL E   R    +++V+YN L++   + G +  A S++ E+L          
Sbjct: 245 AVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 337 --------REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
                     KN      T+  LI   CK             VEE        + SL  +
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCK----------FVGVEE--------SHSLYKK 346

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M  +G   +  TC+S++ GF +  KL  A  LF+EM   G  P  VSY T+IN L K  R
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA++   +M+ +G   D++T + +++GL +  K   A ++    L+    P+   Y+ 
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+ G C  GK+E A  +   M+K +  PN++T++++++G  K G   KA+++   +++  
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P+ I Y I + G         A +F  +   R +  + + + IL+
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILL 573



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 70/427 (16%)

Query: 66  IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           +Q+   P  +  ++ I  Y K    D A D  + M        N IF      L R  + 
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A+  +  ++ KG+ PD+ +Y ++I+G  K G+ L AL++  EM E+ +  +VV YN L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  + G Y   + +  R++ E  + P+ +TYN +IN  C  G+ ++ L++ + MK   
Sbjct: 643 IKGLLRLGKY-DPRYVCSRMI-ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700

Query: 237 REKDSFTYCSFIHGLCKAGNV----------------EGAERVYR--------------- 265
              ++ TY   I GLCK G V                E A+++ +               
Sbjct: 701 IMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQ 760

Query: 266 -----EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
                EMV+ GI  D VTYNA+I G+C    +++  + +  M   G   N+ +YN L+ G
Sbjct: 761 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 820

Query: 320 LLENG----KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L   G     ++E   +   + E+    ++ T+ +L++G  + G  N+   I+  +E   
Sbjct: 821 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVG--NRKKTIILHIE--- 875

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G      T N L++ + ++ K+  A  L  ++  KG  P   +
Sbjct: 876 -------------MITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFT 922

Query: 436 YNTLING 442
           Y+ L  G
Sbjct: 923 YDILTCG 929



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 6/225 (2%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L+  ++   +   A   F  M   G  PT+  +NTL+          +      +ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV--TMYNILIHGLCSAGKVE 520
           G  PD+ + ++L++ LC+   +D+AL     +L+     D+    YN +I G C  G V+
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALG----YLRNNDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
               L S M KR    + +T N L+ G  + G    A  +  ++++  +  D+I  N  +
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            G C    MS A E + ++    +    +T++ L++A    G  T
Sbjct: 240 DGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/569 (27%), Positives = 283/569 (49%), Gaps = 22/569 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC-------- 111
            +LI+  + + P+ V  + ++    + S+ ++A+D+  RM     C   ++         
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSS-SCIPNVVTYRILLSGC 324

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            RK Q  + KR L+ +  +G  P+   + ++I+   KS D   A  +F +M + G +   
Sbjct: 325 LRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384

Query: 171 VCYNILIDGFFK-----KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           + YNI I            D +   E     +++  V  N V  +     LC  G+FD+ 
Sbjct: 385 LVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQA 444

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            ++   M       D  TY   I  LC A  VE A  ++ EM  +GI     TY  +ID 
Sbjct: 445 FKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDS 504

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+AG I++  + ++ M  KGC  NVV+Y  LI   L+  ++  A  ++E++  + C  +
Sbjct: 505 FCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN 564

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK-LNAYTCNS 403
             T+  LI+G CK G + KA QI   +    E    D      ++D + C+  N  T  +
Sbjct: 565 VVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF---KLDHNNCEGPNVITYGA 621

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +A++++ A  L   M   GC P  + Y+ +I+G CK+ +  +A     +M E+G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P++ TYS  I+ L +  ++D+ LK+  + L+   TP+V +Y  ++ GLC  GK ++A 
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG  K+G  ++ LE++  +  +   P+ I+Y + +   
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWH 612
           CS   + +A++ L D + +   P  I  H
Sbjct: 802 CSNGLLDEAYKLL-DEMKQTYWPKHILSH 829



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 269/549 (48%), Gaps = 51/549 (9%)

Query: 74  DVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           D A  +I +  GK  +PD         +  +    G LC   + EKA      +   G+ 
Sbjct: 442 DQAFKIICEMMGKGFVPD---------DSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P VY+Y  +I+   K+G +  A   FDEM  +G   NVV Y  LI  + K      A E+
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS----------- 241
           +E +++E    PNVVTY  +I+G CK G+ ++  +++ RM+ +    D            
Sbjct: 553 FEMMLLE-GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNC 611

Query: 242 -----FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
                 TY + + GLCKA  V+ A  +   M+  G   + + Y+A+IDGFC+ GK+++  
Sbjct: 612 EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671

Query: 297 ELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           E++  M  +G   N+ +Y+  I  L ++ ++D  + +   + E +C  +   +  +++GL
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGL 731

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G  ++A +++ ++EE                   GC  N  T  ++++GF ++ K+E
Sbjct: 732 CKIGKTDEAYKLMLKMEE------------------KGCNPNVVTYTAMIDGFGKSGKIE 773

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             + LF++M  KGC+P  ++Y  LIN  C      EAY  + EM +  W   ++++  +I
Sbjct: 774 QCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII 833

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK--RN 533
            G   S++   ++ L  +  +    P  ++Y ILI     AG++E AL L   +     +
Sbjct: 834 EGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSH 891

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
            V N   Y +L++ L      DKALE++  ++ + + P++      +KGL    +  +A 
Sbjct: 892 AVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEAL 951

Query: 594 EFLNDALCR 602
           + L+D++C+
Sbjct: 952 Q-LSDSICQ 959



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 165/693 (23%), Positives = 304/693 (43%), Gaps = 90/693 (12%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRL---------IDPKLVVHVS-------- 58
           KNP   +  F  A R+ GY+H+P +F  +L  L         +  K ++ +         
Sbjct: 117 KNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLR 176

Query: 59  RILELIEIQKC--------------------YCPEDVAL-SVIQAYGKNSMPDKALDVFQ 97
           R+L  + ++KC                    Y P      ++IQ + +    D A  V +
Sbjct: 177 RLLNFL-VRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKR 235

Query: 98  RM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
            M             C A  LC+  +  +A   ++    +   PD   Y  +++GL ++ 
Sbjct: 236 EMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEAS 293

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
               A+ +   M       NVV Y IL+ G  +KG   R K I   ++ E   YPN   +
Sbjct: 294 LFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITE-GCYPNREIF 352

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK------AGNVEGAERV 263
           N +I+  CK   +    +++ +M K   +     Y  FI  +C       +  ++  E+ 
Sbjct: 353 NSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKA 412

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLE 322
           Y EM++ G+ ++ V  +      C AGK  + F++  E+MG+    +  +Y+ +I  L +
Sbjct: 413 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCD 472

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
             KV++A S++E ++         T+ +LI+  CK G + +A +  +E+   G       
Sbjct: 473 ASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVT 532

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM- 424
                       ++  A  L   M   GCK N  T  +L++G  +A ++E A  ++  M 
Sbjct: 533 YTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592

Query: 425 --------------SRKGCS-PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
                             C  P V++Y  L++GLCK  R  EA+  +  ML  G +P+ I
Sbjct: 593 GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQI 652

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  +I+G C+  K+  A ++  +  ++G++P++  Y+  I  L    +++  L++ S M
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            + +C PN+V Y  ++DGL K G  D+A ++   + E+   P++++Y   + G     ++
Sbjct: 713 LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKI 772

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               E   D   +G  P  IT+ +L+    +NG
Sbjct: 773 EQCLELFRDMCSKGCAPNFITYRVLINHCCSNG 805


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 163/544 (29%), Positives = 263/544 (48%), Gaps = 32/544 (5%)

Query: 92  ALD-VFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEK---GLKPDVYSYG 139
           A+D V +RM E      +F C   +  LC + + ++A   L+ + +    G  PDV SY 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           TVING  K GD   A + + EM +R +  +VV Y+ +I    K     +A E+   +V +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV-K 259

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V PN +TYN +++G C   +  E +    +M+ +  E D  TY S +  LCK G    
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A +++  M + G+  D  TY  ++ G+   G + E   L ++M R G   +   +NILI 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
              +  KVDEA+ ++  +R+   N +  T+G +I  LCK+G ++                
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD---------------- 423

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
             DA     +M   G   N     SL++      K + A  L  EM  +G     + +N+
Sbjct: 424 --DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+  CK  R  E+      M+  G KP++ITYS LI+G C + K+D A KL       G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   YN LI+G C   +++DAL L+  M      PN++TYN ++ GLF T     A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E++  I +   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A+
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661

Query: 619 MNNG 622
           +  G
Sbjct: 662 LKVG 665



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 257/512 (50%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P V++YG +I    ++G L    A    + ++G     + +  L+ G         A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E S  P+V +  +++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  K G+ + A   Y EM++  I  D VTY+++I   C+   + +  E+   M + G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + N ++YN ++ G   + +  EAI   + +R      D  T+  L++ LCKNG   +A +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +  +L++ M ++G   + +  N L+  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ +F +M + G +P VV+Y  +I  LCK     +A  + ++M+++G  P++I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+ LC   K D A +L  + L +G   +   +N +IH  C  G+V ++ +L+  M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN++TY+TL+DG    G  D+A ++ + +    ++PD ++YN  + G C  SRM
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     + +  G+ P  IT++I+++ + + 
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHT 594



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 248/542 (45%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL---------------SVIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V                 S++  Y  
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M    G E  +         LC+  +  +A++  +S+ ++GL+PD+ 
Sbjct: 279 SEQPKEAIGFLKKMRS-DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T++ G    G L+   A+ D M   G+  +   +NILI  + K+     A  ++ ++
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + PNVVTY  +I  LCK G  D+ +  +++M       +   Y S IH LC    
Sbjct: 398 -RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + AE +  EM++ GI ++ + +N++I   C+ G++ E  +L+++M R G   NV++Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING C+                  
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR------------------ 558

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA +L   M   G   N  T N ++ G     +   A  L+  +++ G    + +
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L     
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 678

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  Y+++   L   G +E+   L+ +M++  C  N    N+++  L + GD  
Sbjct: 679 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 738

Query: 556 KA 557
           +A
Sbjct: 739 RA 740



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 217/471 (46%), Gaps = 26/471 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VF+E+  RG   ++   N  +    +      A   + R+    +  V P V TY +
Sbjct: 34  ARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYGI 92

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C+ GR D        + K     ++ T+   + GLC       A + V R M E 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGKV 326
               D  +   ++ G C   + +E  EL  +M    G     +VVSY  +I G  + G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A S +  + ++  + D  T+  +I  LCK   ++KA+++L                  
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT---------------- 256

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK 
Sbjct: 257 --MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA      M ++G +PD+ TY  L+ G      +     L    ++ G  PD  ++
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NILI       KV++A+ ++S M++    PN+VTY  ++  L K+G  D A+  +  +++
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           E L P+II Y   +  LC   +   A E + + L RGI   TI ++ ++ +
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 146/277 (52%), Gaps = 2/277 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++ +  ++++  + +   G+KP+V +Y T+I+G   +G +  A  +   MF  G++ + 
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LI+G+ +      A  +++ +V  + V PN++TYN+++ GL    R     E++ 
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMV-SSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            + K+  + +  TY   +HGLCK    + A R+++ +  + + ++  T+N MI    + G
Sbjct: 606 GITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 665

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  E  +L+  +   G + +V +Y+++   L+E G ++E   ++  + E  C A+S    
Sbjct: 666 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 725

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            ++  L + G + +A   L+ ++E      A  ASL+
Sbjct: 726 SIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 42/251 (16%)

Query: 417 AIFLFKEMSRKGC---SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           A+  +  M+R G    +PTV +Y  LI   C+  R    ++ +  +++KG++ + IT++ 
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 474 LINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM--- 529
           L+ GLC  K+   A+ +  + + +    PDV    IL+ GLC   + ++AL+L   M   
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY------------- 576
           +     P++V+Y T+++G FK GD DKA   ++ +L+ R+ PD+++Y             
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 577 ----------------------NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
                                 N  L G CS  +  +A  FL      G+ P  +T++ L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307

Query: 615 VRAVMNNGAST 625
           +  +  NG ST
Sbjct: 308 MDYLCKNGRST 318


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 228/421 (54%), Gaps = 21/421 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P +VT+N +++GLC   +  + ++++D M K   E D  TY + I+GLCK GN   A ++
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            ++M E G   + V YN +ID  C+   + E  + +  M ++G   +V +Y+ ++ G   
Sbjct: 68  LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+V+EA S+++ + E+N   +  T  +LI+GLCK                    R+   
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK-------------------RMISE 168

Query: 383 ASLV-NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A LV   M + G + + YT N+L++G+   S+++ A  LF  M RKGC+P V SYN LIN
Sbjct: 169 AWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILIN 228

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK  R  EA   + EM  K   PD+ TYS L+ G CQ  +   A +L  +    G  P
Sbjct: 229 GHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP 288

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  Y+I++ GLC  G +++A +L   M++    PN+  Y  L++G+   G  + A E++
Sbjct: 289 NLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELF 348

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           +++  + ++P +++Y + + GL      ++A E   +    G LP + T++++++  + N
Sbjct: 349 SNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRN 408

Query: 622 G 622
           G
Sbjct: 409 G 409



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 214/418 (51%), Gaps = 19/418 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K +   A +  + + + G +PDV +Y T+INGL K G+   AL +  +M E+G + N
Sbjct: 20  LCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPN 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +ID   K      A + +  +V E  + P+V TY+ +++G C  GR +E   ++
Sbjct: 80  VVAYNTIIDSLCKDRLVTEAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEATSLF 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +     +  T+   I GLCK   +  A  V+  M E G+  D  TYNA++DG+C  
Sbjct: 139 KQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSR 198

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  +L+ +M RKGC  NV SYNILI G  ++G++DEA  +   +  K+   D  T+
Sbjct: 199 SQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTY 258

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L+ G C+ G   +A ++L E+   G                  G L +A  L+  M +
Sbjct: 259 STLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQE 318

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
              + N +    L+ G     KLE A  LF  +  KG  PTVV+Y  +I+GL K     E
Sbjct: 319 SKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNE 378

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           A    +EM   G  P+  TY+++I G  ++     A++L  + + KGF+ D + + +L
Sbjct: 379 ACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 200/383 (52%), Gaps = 19/383 (4%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+ + + GLC    +  A +++ EMV+ G   D +TY+ +I+G C+ G      +L + M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KGC  NVV+YN +I  L ++  V EA+  +  + ++    D  T+  +++G C     
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN---- 127

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          GR+ +A SL  +M +     N  T   L++G  +   +  A  +F
Sbjct: 128 --------------LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF 173

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M+ KG  P V +YN L++G C   +  EA      M  KG  P++ +Y++LING C+S
Sbjct: 174 ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS 233

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +ID A  L  +   K  TPD+  Y+ L+ G C  G+ ++A +L   M     +PNL+TY
Sbjct: 234 GRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           + ++DGL K G  D+A E+   + E ++ P+I  Y I ++G+C+  ++  A E  ++   
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV 353

Query: 602 RGILPTTITWHILVRAVMNNGAS 624
           +GI PT +T+ +++  ++  G S
Sbjct: 354 KGIQPTVVTYTVMISGLLKGGLS 376


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 289/614 (47%), Gaps = 86/614 (14%)

Query: 45  LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFG 104
           +RRL     V  V   L+ + ++   C E   ++ + A+ +   PD+AL  F R     G
Sbjct: 68  VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA-VFDEMFE 163
           C                       +   P +Y++  +I+ L++  +++GA+A V   M +
Sbjct: 128 CA----------------------RPTAPRLYNH--LIDALLRE-NMVGAVALVCGNMRK 162

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            GV+ NV  YN+L+    +      A+++ + +  +    P+ VTY  +++ LC  GR D
Sbjct: 163 DGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATK-GCPPDDVTYGTIVSALCTLGRVD 221

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  E+      +     + +Y + I  LC+   ++    V  +MV  G+  + +TY  ++
Sbjct: 222 EATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIV 276

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           + FC+AG+++    +   M   GC  NV ++  L+ GL  +G+V +A+ +W+ +  +   
Sbjct: 277 NAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWA 336

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
             + ++ VLI GLC  G L  A  +LN+                  M++HGC  NA T +
Sbjct: 337 PSTVSYNVLIRGLCSVGDLKGASSVLND------------------MEQHGCFPNARTYS 378

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++GF +A  L+ AI ++ +M+R GC P VV Y  ++   CK   F +A S + +ML +
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              P+ +T++ LI  LC  +++  AL +  +  + G  P+   YN L+HGL   G   DA
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD---------- 572
           LQ+   M+      +LVTYNT++ GL +     +A+     ++   ++PD          
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558

Query: 573 -------------------------IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
                                    I+ Y I +  LC+  ++ DA  +L   L  GI P 
Sbjct: 559 YCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPN 618

Query: 608 TITWHILVRAVMNN 621
           T+TW++LVR V  N
Sbjct: 619 TVTWNVLVRGVFRN 632


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 266/515 (51%), Gaps = 26/515 (5%)

Query: 115 QFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           QF  +   L+ L E +  K     Y  +IN  V+S  L  +++ F+EM + G      C+
Sbjct: 73  QFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCF 132

Query: 174 NILIDGFFKKGDYMRAKEIWERLVME--TSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
           N L+        + +    W     E  + V  +V ++ ++I G C+ G  ++  ++   
Sbjct: 133 NYLLTFVVGSSSFNQ----WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIE 188

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           + +     +   Y + I G CK G +E A+ ++ EM + G+  +  TY  +I+G  + G 
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            K+ FE++E M   G   N+ +YN ++  L ++G+  +A  +++ +RE+  + +  T+  
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI GLC+                  E +L +A  +V++M   G   N  T N+L++GF  
Sbjct: 309 LIGGLCR------------------EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             KL  A+ L +++  +G SP++V+YN L++G C+      A   VKEM E+G KP  +T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++LI+   +S  ++ A++L     + G  PDV  Y++LIHG C  G++ +A +L+ +M 
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           ++NC PN V YNT++ G  K G   +AL++   + E+ L P++ SY   ++ LC   +  
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +A   +   +  GI P+T    ++ RA  ++  S+
Sbjct: 531 EAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSS 565



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 212/419 (50%), Gaps = 25/419 (5%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            LDV+     I GC     C   + EK+   L  L E G  P+V  Y T+I+G  K G++
Sbjct: 160 VLDVYSFGILIKGC-----CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  +F EM + G+  N   Y +LI+G FK G   +  E++E++  E  V+PN+ TYN 
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM-QEDGVFPNLYTYNC 273

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N LCK GR  +  +++D M++     +  TY + I GLC+   +  A +V  +M   G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           I  + +TYN +IDGFC  GK+ +   L   +  +G   ++V+YNIL+ G    G    A 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + + + E+       T+ +LI+   ++  + KAIQ+          RL+        M+
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL----------RLS--------ME 435

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G   + +T + L++GF    ++  A  LFK M  K C P  V YNT+I G CK     
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            A   +KEM EK   P++ +Y  +I  LC+ +K   A +L  + +  G  P  ++ +++
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 10/259 (3%)

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K+     A  VF  M E         +    G LCR+ +  +A + ++ +   G+ P++ 
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+I+G    G L  AL++  ++  RG+  ++V YNIL+ GF +KGD   A ++ + +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             E  + P+ VTY ++I+   +    ++ +++   M++     D  TY   IHG C  G 
Sbjct: 400 -EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           +  A R+++ MVE     + V YN MI G+C+ G      +L + M  K    NV SY  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 316 LIRGLLENGKVDEAISIWE 334
           +I  L +  K  EA  + E
Sbjct: 519 MIEVLCKERKSKEAERLVE 537


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 241/477 (50%), Gaps = 23/477 (4%)

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           KSGD   A  +F++         V  +  LID     G++ RA+ ++++LV +     + 
Sbjct: 45  KSGD---AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV-QKGCQLDR 100

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
             YNV+I    + G+ D  +EM+  MK    E D +TY   ++ L KAG V+ A   +  
Sbjct: 101 FAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDA 160

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           M+E G+  +  TYN ++D F + G++     L+  M R+G   +VV+YNIL+  L   G+
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           V  A  ++  +    C+ DS T+  L+NGL K+G + +A ++  E              +
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE--------------M 266

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V+R    G  ++    NSL+    +A  ++    L KEMSRKG  P   S+NT+++ L K
Sbjct: 267 VDR----GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +   A      M+E G KPD+I+Y++LI+   +      A ++  + ++ GF P+   
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN LIH L + G+V++A  +   M+   C P++VTYN LMD L K G+  +A  ++  + 
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ + PD +SY + + GL    R+ +A     D    G       + IL+RA    G
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 211/415 (50%), Gaps = 20/415 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R  Q + A      +  KG +PD Y+YG ++N L K+G +  A + FD M ERG+  N+ 
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIP 171

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN+L+D F K G    A  ++  +       P+VVTYN++++ LC  GR     +++ +
Sbjct: 172 TYNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHK 230

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  +    DS+TY + ++GL K+G VE A +V+REMV+ G+ VD V YN+++    +AG 
Sbjct: 231 MTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN 290

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +   ++L + M RKG   +  S+N ++  L +  K D A  ++  + E  C  D  ++ +
Sbjct: 291 MDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNI 350

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+   + G   +A Q+L E+ E G                        T NSL++    
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAG------------------FIPETKTYNSLIHWLAT 392

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +++ A  + +EM   GC P VV+YN L++ L K      A    ++M +KG +PD ++
Sbjct: 393 DGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLS 452

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           Y++ I+GL    ++D AL L       G   D  MY ILI     AG  E   QL
Sbjct: 453 YAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 45/338 (13%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           ++ A+ K    D AL +F  M           +      LC   +   A++  + +   G
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR-- 188
             PD Y+Y T++NGL KSG +  A  VF EM +RGV  ++V YN L+    K G+  R  
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295

Query: 189 ---------------------------------AKEIWERLVMETSVYPNVVTYNVMING 215
                                            A+E++ R+V E+   P++++YN++I+ 
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV-ESGCKPDLISYNILIDS 354

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
             + G   +  +M + M +     ++ TY S IH L   G V+ A  V  EM  +G   D
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
            VTYN ++D   + G+ +    L++ M  KG   + +SY + I GL  + ++DEA+ +++
Sbjct: 415 VVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFK 474

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
            ++   C  D   + +LI    + G      Q+ +E +
Sbjct: 475 DMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 229/455 (50%), Gaps = 25/455 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V +Y  V+  L     L  A   FD M   GV  NV  YNIL+     +G    A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  R +      PN VTYN ++   C+ G  D    + D M++   + +  T+ S ++
Sbjct: 177 LSVL-RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G+CKAG +E A +V+ EMV+ G+  D V+YN ++ G+C+ G   E   ++  M RKG + 
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV++  LI  + + G ++ A+ +   +RE+    +  T   LI+G CK G+L+ A+  +
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLN-AYTC-NSLMNGFIQASKLENAIFLFKEMSR 426
            E+ +                    C++  +  C N+L+NG+    +++ A  L +EM  
Sbjct: 356 REMRQ--------------------CRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P VV+Y+T+++  CK      A+   ++MLE G  PD ITYS LI  LC+ K++  
Sbjct: 396 KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD 455

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L    +  G  PD   Y  LI G C  G VE AL L+  M K   +P++VTY+ L++
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLIN 515

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           GL K+    +A  +   +  E   P  I Y+  ++
Sbjct: 516 GLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 240/457 (52%), Gaps = 21/457 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G   +V+ YN ++           A+  ++ + +   V PNV TYN+++  LC  G   E
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKE 175

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L +   M+    + ++ TY + +   C+AG V+ AER+   M E G+  + VT+N++++
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+AG++++  ++++ M ++G   + VSYN L+ G  + G   EA+S++  +  K    
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T   LI+ +CK G L +A+                   LV  M + G ++N  T  +
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAV------------------GLVREMRERGLQMNEITFTA 337

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF +   L++A+   +EM +    P+VV YN LING C V R  EA   V+EM  KG
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            KPD++TYS +++  C++     A +L  Q L+ G  PD   Y+ LI  LC   ++ DA 
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+ NM      P+ VTY +L+DG  K G+ ++AL + + +++  + PD+++Y++ + GL
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +R  +A   L        +P  I +  L+R   N
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRN 554



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 240/491 (48%), Gaps = 38/491 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +   ++A   L  +   G  P+  +Y T++    ++G++  A  + D M E G++ N
Sbjct: 167 LCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPN 226

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V +N +++G  K G    A+++++ +V E  + P+ V+YN ++ G CK G   E L ++
Sbjct: 227 LVTFNSVVNGICKAGRMEDARKVFDEMVKE-GLAPDGVSYNTLVGGYCKVGCSHEALSVF 285

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  T+ S IH +CKAGN+E A  + REM E G+ ++ +T+ A+IDGFC+ 
Sbjct: 286 AEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345

Query: 290 GKIKECFELWEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           G + +   L  V   + C    +VV YN LI G    G++DEA  +   +  K    D  
Sbjct: 346 GFLDDA--LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV 403

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  +++  CKNG  + A Q+  ++ E G                 E RL DA  L   M
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G + +  T  SL++G  +   +E A+ L  EM + G  P VV+Y+ LINGL K  R 
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523

Query: 450 GEAYSFVKEMLEKGWKPDMITYS---------------LLINGLCQSKKIDMALKLCCQF 494
            EA   + ++  +   P  I Y                 L+ G C    ++ A K+    
Sbjct: 524 KEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSI 583

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L + +  D ++Y++LIHG C  G V  AL  +  M +    PN  +  +L+ GLF+ G  
Sbjct: 584 LDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMV 643

Query: 555 DKALEIWNHIL 565
            +A ++   +L
Sbjct: 644 VEADQVIQQLL 654



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 222/478 (46%), Gaps = 35/478 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+  + E A++  + + ++GL PD  SY T++ G  K G    AL+VF EM  +G+  +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +  LI    K G+  RA  +  R + E  +  N +T+  +I+G CK G  D+ L   
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLV-REMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++   +     Y + I+G C  G ++ A  + REM   G+  D VTY+ ++  +C+ 
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G     F+L + M   G L + ++Y+ LIR L E  ++ +A  +++ +       D  T+
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTY 475

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK G + +A+                  SL + M K G   +  T + L+NG 
Sbjct: 476 TSLIDGHCKEGNVERAL------------------SLHDEMVKAGVLPDVVTYSVLINGL 517

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYN---------------TLINGLCKVERFGEAY 453
            ++++ + A  L  ++  +   P  + Y+                L+ G C      EA 
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEAD 577

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              + +L++ W  D   YS+LI+G C+   +  AL    Q LQ GF P+ T    LI GL
Sbjct: 578 KVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
              G V +A Q+   +     + +      L+D   K G+ D  L++ + +  + L P
Sbjct: 638 FEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 157/314 (50%), Gaps = 19/314 (6%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V++YN ++  L  +  +  A   ++ +       +  T+ +L+  LC  G+  +A+ +L
Sbjct: 122 SVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVL 180

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M   GC  NA T N+L+  F +A +++ A  L   M   G
Sbjct: 181 RD------------------MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P +V++N+++NG+CK  R  +A     EM+++G  PD ++Y+ L+ G C+      AL
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  +  +KG  PDV  +  LIH +C AG +E A+ L   M++R    N +T+  L+DG 
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  D AL     + + R++P ++ YN  + G C   RM +A E + +   +G+ P  
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402

Query: 609 ITWHILVRAVMNNG 622
           +T+  ++ A   NG
Sbjct: 403 VTYSTILSAYCKNG 416



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 31/314 (9%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P+ V  S I  AY KN     A  + Q+M E         +     +LC +++   A   
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVL 459

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             ++   GL+PD  +Y ++I+G  K G++  AL++ DEM + GV  +VV Y++LI+G  K
Sbjct: 460 FKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A+ +  +L  E  V  N+                      +D + +  R  +  
Sbjct: 520 SARTKEAQRLLFKLYHEEPVPANI---------------------KYDALMRCCRNAELK 558

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           +  + + G C  G +  A++VY+ +++    +D   Y+ +I G CR G + +     + M
Sbjct: 559 SVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQM 618

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            + G   N  S   LIRGL E G V EA  + + L      AD+     LI+   K G +
Sbjct: 619 LQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNV 678

Query: 362 NKAIQILNEVEEGG 375
           +  + +L+ +   G
Sbjct: 679 DAVLDVLHGMARDG 692


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 258/522 (49%), Gaps = 30/522 (5%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PD  +Y  +I    + G L    AVF  + + G   N + +N L+ G         A 
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER---EKDSFTYCSF 247
            I    + E    PNVV+YN ++ G C   R +E LE+   M  ++      D  +Y + 
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  + G V+ A  ++ +M++ GI  D VTYN +IDG C+A  +     +++ M  KG 
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +  +YN LI G L  GK  E + + E +   +   D   + +L++ LCKNG   +A  
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 367 ILNEVEEGG---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK- 422
           I + V   G   +  + +A  + ++M + G   N     +L++   +  ++++AI  F  
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 423 ----------------------EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
                                 EM  +G    VV +NTL+  LC+  R  EA   ++ ML
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
             G +PD+I+Y+ L++G C + + D A KL    +  G  P+   YN L+HG C A +++
Sbjct: 551 RVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRID 610

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA  L   M      P++VTYNT++ GLF+TG   +A E++ +++  R + D+ +YNI L
Sbjct: 611 DAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC  + + +AF+       +G+    IT++I++ A++  G
Sbjct: 671 NGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGG 712



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 263/525 (50%), Gaps = 27/525 (5%)

Query: 110 LCRKRQFEKAKRFLNSLW---EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RG 165
           LC  ++ ++A   L  LW   E G  P+V SY T++ G         AL +   M + +G
Sbjct: 240 LCDAKRLDEATNIL--LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQG 297

Query: 166 VE--TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           +    +VV YN +I+GFF++G   +A  ++ +++ +  + P+VVTYN +I+GLCK    D
Sbjct: 298 LSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI-DRGIPPDVVTYNTVIDGLCKAQVVD 356

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
               ++ +M     +  + TY   IHG    G  +   R+  EM    +  D   Y  ++
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           D  C+ G+  E   +++ + RKG             +  +  +DEA+ I++ +R++  + 
Sbjct: 417 DYLCKNGRCTEARNIFDSVIRKG-------------IKPDAMIDEAVCIFDKMRQQGLSP 463

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG-----RLADAASLVNRMDKHGCKLNA 398
           +   +G LI+ LCK G ++ AI   N++     G     +   A  LV  M   G +L+ 
Sbjct: 464 NVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDV 523

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N+LM    +  ++  A  L + M R G  P V+SYNTL++G C   R  EA   +  
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+  G KP+  TY+ L++G C++++ID A  L  + L  G TPDV  YN ++HGL   G+
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGR 643

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
             +A +LY NM       ++ TYN +++GL K    D+A +++  +  + L+  II++NI
Sbjct: 644 FSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNI 703

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +  L    +  DA +        G++P   T+ ++   ++  G+
Sbjct: 704 MIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 748



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 271/566 (47%), Gaps = 78/566 (13%)

Query: 90  DKALDVFQ-RMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE-KGLK--PDVY 136
           D+A ++   RM E FGC   ++         C + + E+A   L+ + + +GL   PDV 
Sbjct: 247 DEATNILLWRMPE-FGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVV 305

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY TVING  + G +  A  +F +M +RG+  +VV YN +IDG  K     RAK +++++
Sbjct: 306 SYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQM 365

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            ++  V P+  TYN +I+G    G++ E + + + M  ++ E D F Y   +  LCK G 
Sbjct: 366 -LDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGR 424

Query: 257 VEGAERVYREMVESGIFVDA---------------------VTYNAMIDGFCRAGKIKEC 295
              A  ++  ++  GI  DA                     V Y A+ID  C+ G++ + 
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA 484

Query: 296 F----------------ELWE--------VMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
                            E WE        ++ +   L+VV +N L+  L   G+V EA  
Sbjct: 485 ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQR 544

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + EL+       D  ++  L++G C  G                  R  +AA L++ M  
Sbjct: 545 LIELMLRVGVRPDVISYNTLVDGHCLTG------------------RTDEAAKLLDVMVS 586

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K N +T N+L++G+ +A ++++A  L +EM   G +P VV+YNT+++GL +  RF E
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A      M+    + DM TY++++NGLC++  +D A K+      KG    +  +NI+I 
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            L   GK EDA+ L++ +     VP++ TY  + + L K G  ++   +++ + E    P
Sbjct: 707 ALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAP 766

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLN 597
           +    N  ++       +S A  +L+
Sbjct: 767 NSRMLNALVRRFLHRGDISRAGAYLS 792



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 83/572 (14%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQ 97
           +F+ +L+ L D K +   + IL L  + +  C  +V    ++++ +   +  ++AL++  
Sbjct: 232 VFNQLLKGLCDAKRLDEATNIL-LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290

Query: 98  RM--NEIFGCEAGILC---------RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
            M  ++   C   ++          R+ Q +KA      + ++G+ PDV +Y TVI+GL 
Sbjct: 291 VMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC 350

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY--- 203
           K+  +  A AVF +M ++GV+ +   YN LI G+   G +   KE+  RL+ E S +   
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKW---KEVV-RLLEEMSTHDLE 406

Query: 204 PNVVTYNVMINGLCKCGR---------------------FDECLEMWDRMKKNEREKDSF 242
           P+   Y ++++ LCK GR                      DE + ++D+M++     +  
Sbjct: 407 PDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVV 466

Query: 243 TYCSFIHGLCKAGNV-----------------------EGAERVYREMVESGIFVDAVTY 279
            Y + I  LCK G V                       E AE +  EM++ GI +D V +
Sbjct: 467 NYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVF 526

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N ++   CR G++ E   L E+M R G   +V+SYN L+ G    G+ DEA  + +++  
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLAD 381
                +  T+  L++G CK   ++ A  +L E+   G                  GR ++
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L   M     + + YT N ++NG  + + ++ A  +F+ +  KG    ++++N +I 
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            L K  +  +A      +   G  PD+ TY L+   L +   ++    L     + G  P
Sbjct: 707 ALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAP 766

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +  M N L+      G +  A    S + ++N
Sbjct: 767 NSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 138/267 (51%), Gaps = 17/267 (6%)

Query: 372 EEGGEGRLA--DAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS----KLEN--AIFLFKE 423
           +    G LA  DA  L + +  H    +    N L+    +AS     LE+   I LF  
Sbjct: 123 DRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDR 182

Query: 424 MSRKGCS----PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           M R+ CS    P   +Y+ LI   C++ R    ++    +L+ GW+ + I ++ L+ GLC
Sbjct: 183 MVRE-CSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLC 241

Query: 480 QSKKIDMALK-LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCV 535
            +K++D A   L  +  + G TP+V  YN L+ G C+  + E+AL+L   M   +  +C 
Sbjct: 242 DAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCP 301

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P++V+YNT+++G F+ G  DKA  ++  +++  + PD+++YN  + GLC    +  A   
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
               L +G+ P+  T++ L+   ++ G
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTG 388



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 4/230 (1%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK-E 458
           T + L+  F +  +LE+   +F  + + G     + +N L+ GLC  +R  EA + +   
Sbjct: 197 TYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWR 256

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFT--PDVTMYNILIHGLCS 515
           M E G  P++++Y+ L+ G C   + + AL+L       +G +  PDV  YN +I+G   
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G+V+ A  L+  M  R   P++VTYNT++DGL K    D+A  ++  +L++ ++P   +
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G  S  +  +    L +     + P    + +L+  +  NG  T
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCT 426


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 269/535 (50%), Gaps = 22/535 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F++A+  L  +  +G  PD  ++ T+I+GL K G    A  V +++ +RG+  +
Sbjct: 88  LCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 147

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +  +I     K + +        +V+     P V+ +N++ING CK    D   ++ 
Sbjct: 148 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 207

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     + FT+   I GLCKA  V  A+++  +MV  G   + VTY+ +I+G C+ 
Sbjct: 208 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQ 267

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ + +EL+++M R+ C  NVV++NILI GL +  +++EA  ++  +RE  C  D  T+
Sbjct: 268 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMD 390
             LI+GLCK+  +++A Q+   + E G                   GR+ADA  + + + 
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   +  T  SL+  + + S+    + L +EM+ KG  P V + + ++ GL +     
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK---GFTPDVTMYN 507
            A      M  +G   D + Y+L++ G+ ++ K + AL +  Q + K    F P  +  +
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVD 507

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L+  LC  G+ +DA QL   M +R     + +YN L+ GL +    D+A +++  ++  
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              P+I + N+ +  LCS +++ DA+E +      G  P   T + L+     +G
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 622



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 254/494 (51%), Gaps = 28/494 (5%)

Query: 110 LCRK-RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           LC K    E A + L  +  KG  P V  +  VING  K+ DL  A  + + M E+G   
Sbjct: 158 LCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVP 217

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NV  + ILI G  K      A+++ E++V      PNVVTY+ +INGLCK G+ D+  E+
Sbjct: 218 NVFTFTILITGLCKANRVGEAQQLLEKMVT-GGCSPNVVTYSTVINGLCKQGQVDDAYEL 276

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M++     +  T+   I GLCKA  +E A ++Y  M E+G   D +TYN++IDG C+
Sbjct: 277 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336

Query: 289 AGKIKECFELWEVMGRKG--CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + ++ E F+L++ +   G    N V+Y+ L  G    G++ +A  I+ +L +K  + D  
Sbjct: 337 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 396

Query: 347 THGVLINGLCKN----------------GY---LNKAIQILNEVEEGGEGRLADAASLVN 387
           T+  LI   CK                 G+   +N    +L  + EG       A  L +
Sbjct: 397 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE--RAIQLFD 454

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK---GCSPTVVSYNTLINGLC 444
            M   GC  +A   N ++ G  +ASK   A+ + +++  K     +P+  + + L+  LC
Sbjct: 455 SMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 514

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +V R  +A   + +M E+G+   + +Y+ L++GL + ++ D A ++    +  G  P+++
Sbjct: 515 QVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 574

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             N++I  LCSA KV+DA +L   M K  C P++ T NTL+ G  K+G  D A ++   +
Sbjct: 575 TVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 634

Query: 565 LEERLRPDIISYNI 578
            E  L P+  ++++
Sbjct: 635 TEAGLEPNDTTHDL 648



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 261/544 (47%), Gaps = 60/544 (11%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ ++YG +I G   +GDL  A+ + +EM   G E N V +  L+ G    G  + A E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +    M     P+V+TY  +++ LCK G+FDE   M   M       D+ T+ + I GLC
Sbjct: 67  FR--AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 253 KAGNVEGAERVYREMVESGI-----------------------------------FVDAV 277
           K G+ E A RV  ++++ G+                                   F   V
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 278 -TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
             +N +I+GFC+A  +   ++L EVM  KGC+ NV ++ ILI GL +  +V EA  + E 
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           +    C+ +  T+  +INGLCK G ++ A ++   +E                      R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT-VVSYN 437
           + +A  L +RM + GC  +  T NSL++G  ++ +++ A  LF+ +   G S    V+Y+
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TL +G   + R  +A      +++KG+ PD+ TY+ LI   C++ +    ++L  +   K
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           GF P V   + ++ GL      E A+QL+ +M  R C  + + YN +++G+ +    +KA
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKA 484

Query: 558 LEIWNHILEERLR---PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           L +   ++++R R   P   + +  ++ LC   R  DA + L+    RG      +++ L
Sbjct: 485 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGL 544

Query: 615 VRAV 618
           +  +
Sbjct: 545 LSGL 548



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 261/526 (49%), Gaps = 33/526 (6%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPDK 91
           G  +S   F  I++RL +    V ++  +  + I K + P  +  + VI  + K    D 
Sbjct: 143 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 202

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           A  + + M E  GC   +         LC+  +  +A++ L  +   G  P+V +Y TVI
Sbjct: 203 AYKLLEVMIEK-GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVI 261

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NGL K G +  A  +F  M  R    NVV +NILIDG  K      A++++ R+  ET  
Sbjct: 262 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM-RETGC 320

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE-REKDSFTYCSFIHGLCKAGNVEGAE 261
            P+++TYN +I+GLCK  + DE  +++  + ++     ++ TY +  HG    G +  A 
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
           R++  +V+ G   D  TY ++I  +C+  +  E  EL E M  KG    V + + ++ GL
Sbjct: 381 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 440

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            E    + AI +++ +  + C  D+  + +++ G+ +    NKA+ +L +V         
Sbjct: 441 FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQV--------- 491

Query: 381 DAASLVNRMDKHGCKLN--AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                   +DK   K N  +   ++L+    Q  + ++A  L  +MS +G +  V SYN 
Sbjct: 492 --------IDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNG 543

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           L++GL +++R+ EA    + M+  G  P++ T +++I+ LC + K+D A +L  +  + G
Sbjct: 544 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 603

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             PD+   N LI G C +G+ + A +L   M +    PN  T++ L
Sbjct: 604 CCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 52/327 (15%)

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGR----------LADAASLVNRM 389
           C  +  T+G+LI G    G L+ AIQ+L E++  G EG           L DA  +V  +
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 390 D-----KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           +        C  +  T  +L++   +A K + A  + +EM  +GC+P  V+++TLI+GLC
Sbjct: 65  EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 445 KVERFGEAYSFVKEMLE------------------------------------KGWKPDM 468
           K     +A+  ++++++                                    KG+ P +
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + ++L+ING C++K +D A KL    ++KG  P+V  + ILI GLC A +V +A QL   
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M    C PN+VTY+T+++GL K G  D A E++  +      P+++++NI + GLC   R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           + +A +  +     G  P  IT++ L+
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLI 331



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 1/155 (0%)

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+  TY +LI G   +  +D+A++L  +    GF  +  ++  L+ GLC AG+V +AL+ 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M K +C P+++TY  L+  L K G  D+A  +   ++     PD ++++  + GLC 
Sbjct: 67  FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                 AF  L D + RG+  +   +  +++ + N
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCN 160



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 1/123 (0%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   Y ILI G  SAG ++ A+QL   MK      N V + TLM GL   G   +ALE 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  + ++   PD+++Y   +  LC   +  +A   L + + RG  P T+T+  L+  +  
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 621 NGA 623
            G+
Sbjct: 126 FGS 128



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R C+PN  TY  L+ G    GD D A+++   +       + + +   +KGLC   R+ +
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A E    A+ +   P  +T+  LV A+   G
Sbjct: 63  ALEHFR-AMAKDCAPDVMTYTALVHALCKAG 92


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 248/515 (48%), Gaps = 33/515 (6%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKGL 131
           D ALS          P   +D  + +  I   +  + +L   RQ +            G+
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSF----------GI 76

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PDVY+   VIN L     +  A +   ++ + G + +   +  LI G   +G    A  
Sbjct: 77  PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 136

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           ++++++ E    PNVVTY  +INGLCK  +  E   ++  M       +  TY S IHGL
Sbjct: 137 LFDKMIGE-GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK    +    +  EMV+S I  D  T N ++D  C+ G + E  ++ ++M  +G   NV
Sbjct: 196 CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 255

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+YN L+ G     +VD A+ +++ +  K+C A+  ++  LING CK   ++KA+ +  E
Sbjct: 256 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                             M +     N  T N+L++G     +L++AI LF EM  +G  
Sbjct: 316 ------------------MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 357

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P +V+Y TL + LCK     +A + +K +    W PD+  Y+ +++G+C++ +++ A  L
Sbjct: 358 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                 KG  P+V  YNI+IHGLC  G + +A +L+S M K  C PN  TYN +  G  +
Sbjct: 418 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 477

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
             +  + +E+   +L      D +S    L G+ S
Sbjct: 478 NNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLS 511



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 277/592 (46%), Gaps = 87/592 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +++     +N + +  + PDV++  TV++ L K G +  A  V D M  RGVE N
Sbjct: 195 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 254

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN L+DG   + +   A ++++ +V +  V  NV++YN +ING CK    D+ + ++
Sbjct: 255 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV-ANVISYNTLINGYCKIQSVDKAMYLF 313

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM------- 282
           + M + E   ++ TY + IHGLC  G ++ A  ++ EMV  G   D VTY  +       
Sbjct: 314 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 373

Query: 283 ----------------------------IDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
                                       +DG CRAG++++  +L+  +  KG   NV +Y
Sbjct: 374 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 433

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VE 372
           NI+I GL + G + EA  ++  + +  C+ +  T+ ++  G  +N    + I++L E + 
Sbjct: 434 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 493

Query: 373 EGGEGRLADAASLVNRMDKHG---------CKLNAYT------CNSLMNGFI-------- 409
            G    ++    LV  +   G         CK ++ +        SL   F+        
Sbjct: 494 RGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLH 553

Query: 410 ----QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
                 + L++A+  F  M      P+ V +  L+  + K++ +    S   +M   G  
Sbjct: 554 SRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP 613

Query: 466 PDMITYSLLINGLCQSKKIDMA-------LKL---------------CCQFLQKGFTPDV 503
           PD+ T ++LIN  C  +++  A       LKL                C+ + KG +PD+
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDI 673

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN LIH LC+  + +    L + M     +PN+V ++T++D L K G    A ++ + 
Sbjct: 674 FTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDM 733

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++  + PD+++Y   + G C  S M +A +  +  + +G +P   +++IL+
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 785



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 253/508 (49%), Gaps = 20/508 (3%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            ++A    N +  K   P    +  ++  + K+      L++  +M   G+  +V    I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I+          A     + +++    P+  T+  +I GLC  G+  E L ++D+M   
Sbjct: 86  VINSLCHLNRVDFAFSALAK-ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +  TY + I+GLCK   V  A  ++ EM+  GI  + VTYN++I G C+  + K  
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204

Query: 296 FELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L  E++  K   +V + N ++  L + G V EA  + +++  +    +  T+  L++G
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C          + NEV+         A  + + M    C  N  + N+L+NG+ +   +
Sbjct: 265 HC----------LRNEVDV--------AVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 306

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A++LF+EMSR+  +P  V+YNTLI+GLC V R  +A S   EM+ +G  PD++TY  L
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
            + LC+++ +D A+ L        + PD+ +Y  ++ G+C AG++EDA  L+SN+  +  
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN+ TYN ++ GL K G   +A ++++ + +    P+  +YN+  +G    +      E
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            L + L RG      T  +LV  + ++G
Sbjct: 487 LLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 258/573 (45%), Gaps = 65/573 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + + A   L  + + G +PD  ++ T+I GL   G +  AL +FD+M   G + N
Sbjct: 90  LCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPN 149

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K      A  I+  ++ +  + PN+VTYN +I+GLCK   +     + 
Sbjct: 150 VVTYGTLINGLCKDRQVTEAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLM 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  ++   D FT  + +  LCK G V  A  V   M+  G+  + VTYNA++DG C  
Sbjct: 209 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 268

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++    ++++ M  K C+ NV+SYN LI G  +   VD+A+ ++E +  +    ++ T+
Sbjct: 269 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 328

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GLC  G L  AI + +E+   G+                   L  A +L+  ++ 
Sbjct: 329 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 388

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                +     ++++G  +A +LE+A  LF  +S KG  P V +YN +I+GLCK     E
Sbjct: 389 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 448

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM + G  P+  TY+L+  G  ++ +    ++L  + L +GF+ DV+   +L+ 
Sbjct: 449 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 508

Query: 512 GLCSAG----------------------------------------------KVEDALQL 525
            L   G                                               ++DAL  
Sbjct: 509 MLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSS 568

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           ++ M   +  P+ V +  L+  + K       L +   +    + PD+ + NI +   C 
Sbjct: 569 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 628

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             R+  AF  L   L  G  P  +T+  L+  +
Sbjct: 629 LRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGL 661



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/592 (24%), Positives = 262/592 (44%), Gaps = 80/592 (13%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+ RQ  +A    + +  KG+ P++ +Y ++I+GL K  +     
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            + +EM +  +  +V   N ++D   K+G    A ++ + ++    V PNVVTYN +++G
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI-HRGVEPNVVTYNALMDG 264

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
            C     D  ++++D M   +   +  +Y + I+G CK  +V+ A  ++ EM    +  +
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324

Query: 276 AVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
            VTYN +I G C  G++++   L+ E++ R    ++V+Y  L   L +N  +D+A+++ +
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EG 377
            +   N + D   +  +++G+C+ G L  A  + + +   G                 +G
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 444

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            LA+A+ L + M+K+GC  N  T N +  GF++ ++    I L +EM  +G S   VS  
Sbjct: 445 LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS-VDVSTT 503

Query: 438 TLING--------------LCK---------------------------------VERFG 450
           TL+ G              LCK                                      
Sbjct: 504 TLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLD 563

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A S    ML     P  + ++ L+  + + K     L L  Q    G  PDV   NILI
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +  C   ++  A  + + + K    P++VTY TLM+GL K             ++ + + 
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGIS 670

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           PDI +YN  +  LC+          LN+ +   I+P  + +  +V A+   G
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/654 (23%), Positives = 271/654 (41%), Gaps = 102/654 (15%)

Query: 39  HLFHHILRRLIDPKLVV---------HVSRILELIE-----IQKCYCPEDVALSVIQAY- 83
           +LF  + R+ + P  V          HV R+ + I      + +   P+ V    +  Y 
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 84  GKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
            KN   DKA+ + + +         +I+      +CR  + E A+   ++L  KGL+P+V
Sbjct: 371 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           ++Y  +I+GL K G L  A  +F EM + G   N   YN++  GF +  + +R  E+ E 
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490

Query: 196 LVMETSVYPNVVTYNVMINGLCKCG----------------------------------- 220
           + +      +V T  +++  L   G                                   
Sbjct: 491 M-LARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSH 549

Query: 221 -----------RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
                        D+ L  ++RM        +  +   +  + K  +      +  +M  
Sbjct: 550 NSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDS 609

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
            GI  D  T N +I+ FC   ++   F +   + + G   +VV+Y  L+ GL +      
Sbjct: 610 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK------ 663

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
                  +  K  + D  T+  LI+ LC           L E +           +L+N 
Sbjct: 664 -------MITKGISPDIFTYNSLIHALCN----------LCEWKH--------VTTLLNE 698

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M       N    +++++   +   +  A  +   M ++G  P VV+Y  L++G C    
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA      M+ KG  P++ +Y++LING CQ +++D A+ L  Q   +G   D   YN 
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LIHGLC  G+++ A+ L+  M     +P+LVTY  L+D L K     +A+ +   I    
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L  DI+ YNI + G+C    +  A +  ++   +G+ P   T++I++  +   G
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 932



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 210/451 (46%), Gaps = 42/451 (9%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           AL+ F+ M       + V +  L+    K   Y     +  ++     + P+V T N++I
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD-SFGIPPDVYTLNILI 623

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C   R      +  ++ K   + D  TY + ++GLCK             M+  GI 
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGIS 670

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
            D  TYN++I   C   + K    L  E++  K   NVV ++ ++  L + G +  A  +
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            +++ ++    D  T+  L++G C    +++A+++ +                   M   
Sbjct: 731 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT------------------MVHK 772

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  N  + N L+NG+ Q  +++ A+ L ++MS +G     V+YNTLI+GLC V R   A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +   EM+  G  PD++TY +L++ LC++  +  A+ L           D+ +YNI I G
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 892

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA---------LEIWNH 563
           +C AG++E A  L+SN+  +   P++ TYN ++ GL K G  D+A          +IW++
Sbjct: 893 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
               R +  +I   I L  +     +S  FE
Sbjct: 953 STSSRNQKSLIYQKIMLPEIDLVYSISVMFE 983



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 134/247 (54%), Gaps = 2/247 (0%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F      LC++     A   ++ + ++G++PDV +Y  +++G     ++  A+ VFD M
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             +G   NV  YNILI+G+ +     +A  + E++ ++  +  + VTYN +I+GLC  GR
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYNTLIHGLCHVGR 828

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
               + ++  M  + +  D  TY   +  LCK  ++  A  + + +  S +  D + YN 
Sbjct: 829 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 888

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            IDG CRAG+++   +L+  +  KG   +V +YNI+I GL + G +DEA  ++  + E +
Sbjct: 889 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948

Query: 341 CNADSTT 347
             ++ST+
Sbjct: 949 IWSNSTS 955



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%)

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           S+NT  +         EA S    ML K   P  + ++ L+  + ++K     L L  Q 
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
              G  PDV    I+I+ LC   +V+ A    + + K    P+  T+ TL+ GL   G  
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +AL +++ ++ E  +P++++Y   + GLC   ++++AF   ++ + +GI P  +T++ L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 615 VRAV 618
           +  +
Sbjct: 192 IHGL 195


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 262/544 (48%), Gaps = 32/544 (5%)

Query: 92  ALDVFQR-------MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK---GLKPDVYSYG 139
           A+D+  R       M ++F C   +  LC + + ++A   L+ + +    G  PDV SY 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           TVING  K GD   A + + EM +R +  +VV Y+ +I    K     +A E+   +V +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV-K 259

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V PN +TYN +++G C   +  E +    +M+ +  E D  TY S +  LCK G    
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A +++  M + G+  D  TY  ++ G+   G + E   L ++M R G   +   +NILI 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
              +  KVDEA+ ++  +R+   N +  T+G +I  LCK+G ++                
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD---------------- 423

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
             DA     +M   G   N     SL++      K + A  L  EM  +G     + +N+
Sbjct: 424 --DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+  CK  R  E+      M+  G KP++ITYS LI+G C + K+D A KL       G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   YN LI+G C   +++DAL L+  M      PN++TYN ++ GLF T     A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E++  I +   + ++ +YNI L GLC  +   +A     +     +   T T++I++ A+
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661

Query: 619 MNNG 622
           +  G
Sbjct: 662 LKVG 665



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 257/512 (50%), Gaps = 21/512 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P V++YG +I    ++G L    A    + ++G     + +  L+ G         A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSF 247
           +I  R + E S  P+V +  +++ GLC   R  E LE+   M  +       D  +Y + 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  K G+ + A   Y EM++  I  D VTY+++I   C+   + +  E+   M + G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + N ++YN ++ G   + +  EAI   + +R      D  T+  L++ LCKNG   +A +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I + + + G                 +G L +  +L++ M ++G   + +  N L+  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ +F +M + G +P VV+Y  +I  LCK     +A  + ++M+++G  P++I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+ LC   K D A +L  + L +G   +   +N +IH  C  G+V ++ +L+  M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    PN++TY+TL+DG    G  D+A ++ + +    ++PD ++YN  + G C  SRM
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DA     + +  G+ P  IT++I+++ + + 
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHT 594



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 217/471 (46%), Gaps = 26/471 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNV 211
           A  VFDE+  RG   ++   N  +    +      A   + R+    +  V P V TY +
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYGI 92

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA-ERVYREMVES 270
           +I   C+ GR D        + K     ++ T+   + GLC       A + V R M E 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----GRKGCLNVVSYNILIRGLLENGKV 326
               D  +   ++ G C   + +E  EL  +M    G     +VVSY  +I G  + G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A S +  + ++  + D  T+  +I  LCK   ++KA+++L                  
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT---------------- 256

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K+G   N  T NS+++G+  + + + AI   K+M   G  P VV+YN+L++ LCK 
Sbjct: 257 --MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA      M ++G +PD+ TY  L+ G      +     L    ++ G  PD  ++
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NILI       KV++A+ ++S M++    PN+VTY  ++  L K+G  D A+  +  +++
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           E L P+II Y   +  LC   +   A E + + L RGI   TI ++ ++ +
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 246/542 (45%), Gaps = 45/542 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL---------------SVIQAYGK 85
           +H +L R I P +V + S I  L + Q      +V                 S++  Y  
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 86  NSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +  P +A+   ++M    G E  +         LC+  +  +A++  +S+ ++GL+PD+ 
Sbjct: 279 SEQPKEAIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T++ G    G L+   A+ D M   G+  +   +NILI  + K+     A  ++ ++
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  + PNVVTY  +I  LCK G  D+ +  +++M       +   Y S IH LC    
Sbjct: 398 -RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            + AE +  EM++ GI ++ + +N++I   C+ G++ E  +L+++M R G   NV++Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+DEA  +   +       D  T+  LING C+                  
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR------------------ 558

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ DA +L   M   G   N  T N ++ G     +   A  L+  +++ G    + +
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +++GLCK     EA    + +     + +  T++++I  L +  + D A  L   F 
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFS 678

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  P+   Y ++   +   G +E+  QL+ +M+   C  +    N ++  L + G+  
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 556 KA 557
           +A
Sbjct: 739 RA 740



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 43/287 (14%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC---SPTVVSYN 437
           DA  + + + + G   + Y  N  +    + S    A+  +  M+R G    +PTV +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI   C+  R    ++ +  +++KG++ + IT++ L+ GLC  K+   A+ +  + + +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 498 -GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCVPNLVTYNTLMDGLFKTGD 553
               PDV    IL+ GLC   + ++AL+L   M   +     P++V+Y T+++G FK GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 554 CDKALEIWNHILEERLRPDIISY-----------------------------------NI 578
            DKA   ++ +L+ R+ PD+++Y                                   N 
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            L G CS  +  +A  FL      G+ P  +T++ L+  +  NG ST
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 36/253 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+S++  G+KPD  +Y T+ING  +   +  ALA+F EM   GV  N+
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLV-----METSVYPNVV------------------ 207
           + YNI++ G F       AKE++  +      +E S Y N++                  
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY-NIILHGLCKNNLTDEALRMFQ 640

Query: 208 ------------TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                       T+N+MI  L K GR DE  +++     N    + +TY      +   G
Sbjct: 641 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            +E  ++++  M ++G  VD+   N ++    + G+I        ++  K      S   
Sbjct: 701 LLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS 760

Query: 316 LIRGLLENGKVDE 328
           L   LL  GK  E
Sbjct: 761 LFIDLLSGGKYQE 773


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 247/487 (50%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P ++ +G ++  LVK      A+++  EM   G+ +++V +NILI+ F + G    +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +   +++    PN +T   +I GLC  G+  + L   D++       +   Y + I+GLC
Sbjct: 114 FAN-ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G    A ++ R +    +  + V YN +ID  C+   + E F+L+  M  KG   +VV
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI G    GK+++AI ++  +  +  N D  T  +L++G CK              
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK-------------- 278

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EGR+ +A +++  M K G K +  T  SLM+G+    ++  A  +F  M++ G + 
Sbjct: 279 ----EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SYN +ING CK+++  EA +  KEM  K   PD++TY+ LI+GLC+S KI  ALKL 
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   D   YN ++  LC   +V+ A+ L + MK     P++ TY  L+DGL K 
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A  I+  +L +     + +Y + ++G C       A   L+     G +P   T+
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY 514

Query: 612 HILVRAV 618
            I++ ++
Sbjct: 515 EIIILSL 521



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 251/504 (49%), Gaps = 20/504 (3%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L +   ++ A      +   G+  D+ ++  +IN   + G    + +VF  + 
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G E N +    LI G   KG   +A    +++V     + N V Y  +INGLCK G+ 
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV-ALGFHLNKVCYGTLINGLCKVGQT 177

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              L++  R+     + +   Y + I  +CK   V  A  +Y EMV  GI  D VTY+A+
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSAL 237

Query: 283 IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC  GK+ +   L+ +++  +   +V +++IL+ G  + G+V EA ++  ++ ++  
Sbjct: 238 ISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  L++G C    +NKA  I N + +G                  G   N  + 
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG------------------GVTANVQSY 339

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NGF +  K++ A+ LFKEM  K   P VV+YN+LI+GLCK  +   A   V EM +
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G   D ITY+ +++ LC++ ++D A+ L  +   +G  PD+  Y ILI GLC  G+++D
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A  ++ ++  +     + TY  ++ G       DKAL + + + +    P+  +Y I + 
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519

Query: 582 GLCSCSRMSDAFEFLNDALCRGIL 605
            L        A + L + + RG+L
Sbjct: 520 SLFEKDENDMAEKLLREMIARGLL 543



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 216/421 (51%), Gaps = 19/421 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           +  ++VT+N++IN   + G       ++  + K   E ++ T  + I GLC  G +  A 
Sbjct: 87  IASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL 146

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGL 320
             + ++V  G  ++ V Y  +I+G C+ G+     +L   V G+    NVV YN +I  +
Sbjct: 147 HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            +   V+EA  ++  +  K  + D  T+  LI+G C          IL        G+L 
Sbjct: 207 CKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC----------IL--------GKLN 248

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  L N+M       + YT + L++GF +  +++ A  +   M ++G  P VV+Y +L+
Sbjct: 249 DAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G C V++  +A S    M + G   ++ +Y+++ING C+ KK+D A+ L  +   K   
Sbjct: 309 DGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNII 368

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PDV  YN LI GLC +GK+  AL+L   M  R    + +TYN+++D L K    DKA+ +
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              + +E ++PD+ +Y I + GLC   R+ DA     D L +G   T  T+ ++++   +
Sbjct: 429 LTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCD 488

Query: 621 N 621
           N
Sbjct: 489 N 489



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 208/403 (51%), Gaps = 26/403 (6%)

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F +   +  L K    + A  ++REM  +GI  D VT+N +I+ F + G     F ++  
Sbjct: 57  FEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFAN 116

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           + +KG   N ++   LI+GL   G++ +A+   + +     + +   +G LINGLCK G 
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 361 LNKAIQILNEVEEGGEGRLA---------------------DAASLVNRMDKHGCKLNAY 399
            + A+Q+L  V+    G+L                      +A  L + M   G   +  
Sbjct: 177 TSAALQLLRRVD----GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T ++L++GF    KL +AI LF +M  +  +P V +++ L++G CK  R  EA + +  M
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +++G KPD++TY  L++G C  K+++ A  +     Q G T +V  YNI+I+G C   KV
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A+ L+  M  +N +P++VTYN+L+DGL K+G    AL++ + + +  +  D I+YN  
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L  LC   ++  A   L      GI P   T+ IL+  +   G
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 184/361 (50%), Gaps = 24/361 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+ +   +A    + +  KG+ PDV +Y  +I+G    G L  A+ +F++M    +  +
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  ++IL+DGF K+G    AK +   ++M+  + P+VVTY  +++G C   + ++   ++
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLA-MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     +  +Y   I+G CK   V+ A  +++EM    I  D VTYN++IDG C++
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GKI    +L + M  +G   + ++YN ++  L +N +VD+AI++   ++++    D  T+
Sbjct: 385 GKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTY 444

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+GLCK                   GRL DA ++   +   G  +  YT   ++ GF
Sbjct: 445 TILIDGLCKG------------------GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK----GW 464
                 + A+ L  +M   GC P   +Y  +I  L + +    A   ++EM+ +    GW
Sbjct: 487 CDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGW 546

Query: 465 K 465
           K
Sbjct: 547 K 547



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 94/188 (50%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P +  +  ++  L K+  +  A S  +EM   G   D++T+++LIN   Q      +  
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +    L+KG+ P+      LI GLC  G++  AL  +  +       N V Y TL++GL 
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G    AL++   +  + ++P+++ YN  +  +C    +++AF+  ++ + +GI P  +
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 610 TWHILVRA 617
           T+  L+  
Sbjct: 233 TYSALISG 240



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/126 (19%), Positives = 57/126 (45%)

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           TP +  +  ++  L      + A+ L+  M+      +LVT+N L++   + G    +  
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++ +IL++   P+ I+    +KGLC   ++  A  F +  +  G     + +  L+  + 
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 620 NNGAST 625
             G ++
Sbjct: 173 KVGQTS 178


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 243/486 (50%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +SY  VI G+ ++G    A+ VFDEM ER V  N + YN +IDG  K GD      +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++V    + PN +TYNV+++GLC+ GR  E   + D M   +   D FTY     GL 
Sbjct: 254 RDQMVCH-GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-V 311
           + G+ +    ++ + +++G+ +   T + +++G C+ GK+    E+ + +   G +   V
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G+++ A S +  ++ ++   D  T+  LINGLCK              
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK-------------- 418

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R+ +A  L+  M  +G      T N+L++ + +  +LE    +  EM   G  P
Sbjct: 419 ----AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 474

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY +++N  CK  +  EA + + +M  K   P+   Y+ +I+   +    D A  L 
Sbjct: 475 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G +P +  YN+LI GLC+  ++ +A ++ +++     +P+ V+YNTL+      
Sbjct: 535 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 594

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ DKAL++   + +  ++  + +Y+  + GL    R+ +        +   ++P+    
Sbjct: 595 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIH 654

Query: 612 HILVRA 617
           +I+V A
Sbjct: 655 NIMVEA 660



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 19/462 (4%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
            F  +   G   +   +N  +      GD   A  +  R+  + +  PN  +YNV+I G+
Sbjct: 147 AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 206

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            + GR  + +E++D M +     +  TY + I G  K G++E    +  +MV  G+  +A
Sbjct: 207 WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNA 266

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           +TYN ++ G CRAG++ E   L + M  +K   +  +Y+IL  GL  NG     +S++  
Sbjct: 267 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 326

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
             +        T  +L+NGLCK+G ++ A ++L               SLVN     G  
Sbjct: 327 SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ--------------SLVNA----GLV 368

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                 N+L+NG+ Q  +LE A   F +M  +   P  ++YN LINGLCK ER   A   
Sbjct: 369 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 428

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + EM + G  P + T++ LI+   ++ +++    +  +  + G  P+V  Y  +++  C 
Sbjct: 429 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK+ +A+ +  +M  ++ +PN   YN ++D   + G  D+A  +   +    + P I++
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           YN+ +KGLC+ S++S+A E +N      ++P  ++++ L+ A
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 590



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 202/426 (47%), Gaps = 21/426 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L+ +  + + PD ++Y  + +GL ++GD    L++F +  + GV   
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               +IL++G  K G    A+E+ + LV    + P  V YN +ING C+ G  +     +
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLV-NAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK    + D  TY + I+GLCKA  +  A+ +  EM ++G+     T+N +ID + R 
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++CF +   M   G   NVVSY  ++    +NGK+ EA++I + +  K+   ++  +
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+   ++G  ++A                    LV +M  +G   +  T N L+ G 
Sbjct: 515 NAIIDAYVEHGPNDQAF------------------ILVEKMKSNGISPSIVTYNLLIKGL 556

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              S++  A  +   +S     P  VSYNTLI+  C      +A    + M + G K  +
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 616

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY  LI+GL  + ++     L  + +Q    P   ++NI++      G    A  L   
Sbjct: 617 RTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 676

Query: 529 M-KKRN 533
           M +KRN
Sbjct: 677 MLQKRN 682



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 156/363 (42%), Gaps = 55/363 (15%)

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRG 319
           R +  +  +G   D   +N  +     AG + E   +   MGR G    N  SYN++I G
Sbjct: 146 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 205

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           +            W                                           GR 
Sbjct: 206 M------------WR-----------------------------------------AGRG 212

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA  + + M +     N  T N++++G I+   LE    L  +M   G  P  ++YN L
Sbjct: 213 GDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVL 272

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++GLC+  R GE  + + EM  +   PD  TYS+L +GL ++      L L  + L+ G 
Sbjct: 273 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGV 332

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           T      +IL++GLC  GKV  A ++  ++     VP  V YNTL++G  +TG+ + A  
Sbjct: 333 TIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 392

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            +  +    ++PD I+YN  + GLC   R+++A + L +    G+ PT  T++ L+ A  
Sbjct: 393 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 452

Query: 620 NNG 622
             G
Sbjct: 453 RTG 455



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 1/195 (0%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++ S N L+  L  + R  +       +   G +PD   ++  +     +  +  A+ +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 491 CCQFLQKGFTP-DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
             +  + G  P +   YN++I G+  AG+  DA++++  M +R  +PN +TYNT++DG  
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K GD +    + + ++   L+P+ I+YN+ L GLC   RM +    L++   + ++P   
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302

Query: 610 TWHILVRAVMNNGAS 624
           T+ IL   +  NG S
Sbjct: 303 TYSILFDGLSRNGDS 317


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 264/535 (49%), Gaps = 28/535 (5%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD---LLGALAVFDEMFERGVETNV 170
           +Q     +  N +     +P++ +  T++N LV+S     L+ +  VF +  + GV+ NV
Sbjct: 152 KQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNV 211

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVY---PNVVTYNVMINGLCKCGRFDECLE 227
             +NILI G+    +   A     RL+ +   Y   P+ VTYN ++  LCK  +  +  +
Sbjct: 212 NTFNILIHGYCSDNNTEEAL----RLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRD 267

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  +MK +    +  TY   +HG CK   ++ A  V   M   G+  D  TYN M+ G C
Sbjct: 268 LLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLC 327

Query: 288 RAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             GKI E   L + M   K   +VV+YN LI G  E+   D A  + E ++ +    +  
Sbjct: 328 DEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGV 387

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           TH ++I   C  G +++A  ++ ++ E G                  G++A+A  +++ M
Sbjct: 388 THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G KL+ +T N+L++      +L++A  L  +  ++G     V+Y TLI G  K E+ 
Sbjct: 448 GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQA 507

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A    +EM E G    +ITY+ +I GLC S K D A+    + L+KG  PD +  NI+
Sbjct: 508 DRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNII 567

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           IHG C  G VE A Q ++ M + +  P++ T N L+ GL + G  +K L ++N  + +  
Sbjct: 568 IHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGK 627

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             D ++YNI +   C   R+ DAF+ + +   + + P   T++ +V  +   G +
Sbjct: 628 PMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 243/539 (45%), Gaps = 100/539 (18%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     E+A R +N + E G  PD  +Y TV+  L K   L     +  +M   G+  N 
Sbjct: 222 CSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNR 281

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YNIL+ G+ K      A E+ E L+    + P+V TYN M+ GLC  G+ DE + + D
Sbjct: 282 NTYNILVHGYCKLKWLKEAAEVIE-LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRD 340

Query: 231 RMKKNEREKDSFTYCSFIHG-----------------------------------LCKAG 255
           +M+  +   D  TY + I G                                    C  G
Sbjct: 341 KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEG 400

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--------- 306
            ++ A  V  +MVESG   D  TYN MI+G+C+AGK+ E +++ + MGRKG         
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 307 ---------------------------CLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
                                       L+ V+Y  LI G  ++ + D A+ +WE ++E 
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
              A   T+  +I GLC +G  ++A+  LNE+ E G                 EG +  A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
               N+M +H  K + +TCN L+ G  +   LE  + LF     KG     V+YN +I+ 
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG---- 498
            CK  R  +A+  + EM  K  +PD  TY+ ++ GL ++ + + A KL  +F +KG    
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVK 700

Query: 499 ---FTPDV----TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               +P++     MY+  I  LC+ GK +DA++L+   +++    N  TY  LMDGL K
Sbjct: 701 TQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 242/482 (50%), Gaps = 21/482 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P+V ++  +I+G     +   AL + ++M E G   + V YN ++    K+    + 
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQV 265

Query: 190 KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           +++   L M+ S ++PN  TYN++++G CK     E  E+ + M       D +TY + +
Sbjct: 266 RDLL--LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GLC  G ++ A R+  +M    +  D VTYN +IDG          F+L E M  +G  
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V++NI+I+     GK+DEA ++   + E   + D  T+  +ING CK G + +A ++
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM 443

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           ++E+   G                 E +L DA +L  +  K G  L+  T  +L+ G+ +
Sbjct: 444 MDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFK 503

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             + + A+ L++EM   G   T+++YNT+I GLC   +  +A   + E+LEKG  PD  T
Sbjct: 504 DEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDEST 563

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            +++I+G C    ++ A +   + ++    PD+   NIL+ GLC  G +E  L L++   
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            +    + VTYN ++    K    + A ++   +  + L PD  +YN  + GL    R  
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683

Query: 591 DA 592
           +A
Sbjct: 684 EA 685



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 208/433 (48%), Gaps = 30/433 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + ++A R  + +    L PDV +Y T+I+G  +      A  + +EM  RGV+ N
Sbjct: 326 LCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKEN 385

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +NI+I  F  +G    A  +  ++V E+   P+  TYN MING CK G+  E  +M 
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMV-ESGFSPDCFTYNTMINGYCKAGKMAEAYKMM 444

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +   + D+FT  + +H +C    ++ A  +  +  + G  +D VTY  +I G+ + 
Sbjct: 445 DEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKD 504

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +     +LWE M   G +  +++YN +IRGL  +GK D+A+     L EK    D +T 
Sbjct: 505 EQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS 564

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            ++I+G C  G + KA Q  N++ E                   EG L    +L N    
Sbjct: 565 NIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWIS 624

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  ++  T N +++ F +  +LE+A  L  EM  K   P   +YN ++ GL K  R  E
Sbjct: 625 KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684

Query: 452 AYSFVKEMLEKGWK-------PDMIT----YSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           A     +  EKG +       P++ T    YS  I+ LC   K   A+KL  Q  QKG +
Sbjct: 685 AEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVS 744

Query: 501 PDVTMYNILIHGL 513
            +   Y  L+ GL
Sbjct: 745 LNKYTYIKLMDGL 757



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 65/368 (17%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C + + ++A   +  + E G  PD ++Y T+ING  K+G +  A  + DEM  +G++ +
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLD 455

Query: 170 V-----------------------------------VCYNILIDGFFKKGDYMRAKEIWE 194
                                               V Y  LI G+FK     RA ++WE
Sbjct: 456 TFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWE 515

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +  ET +   ++TYN +I GLC  G+ D+ ++  + + +     D  T    IHG C  
Sbjct: 516 EM-KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWE 574

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G VE A + + +MVE  +  D  T N ++ G CR G +++   L+     KG  ++ V+Y
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           NI+I    +  ++++A  +   +  KN   D  T+  ++ GL K G   +A ++  +  E
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694

Query: 374 GGE----------------------------GRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            G+                            G+  DA  L  + ++ G  LN YT   LM
Sbjct: 695 KGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLM 754

Query: 406 NGFIQASK 413
           +G ++  K
Sbjct: 755 DGLLKRRK 762


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 252/474 (53%), Gaps = 20/474 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++ + A    + +  KG+ P V++   +++  +KS     A  ++ EMF   ++++V
Sbjct: 132 CELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSV 191

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +NI+I+   K+G   +AKE +  L+    + PNVVTYN +I+G C  GR +    ++D
Sbjct: 192 VTFNIMINVLCKEGKLKKAKE-FIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFD 250

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            MK    + DS+TY SFI G+CK G +E A  +  +M E G+   AVTYN +IDG+C  G
Sbjct: 251 LMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG 310

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++  F+  + M R+G +  VS YN+LI  L  + K+DEA  I + + EK    DS T+ 
Sbjct: 311 NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYN 370

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LING C+ G + KA  + +E                  M   G +    T  SL+    
Sbjct: 371 ILINGYCRCGNVKKAFTLHDE------------------MISKGIQPTRVTYTSLIYVLS 412

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +++ A  LF+++ RKG  P ++ +N LI+G C       A++ +KEM +    PD +
Sbjct: 413 KRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEV 472

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T++ L+ G C+  K++ A +L  +   +G  PD   YN LI G    G ++DA ++   M
Sbjct: 473 TFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
                 P L+TYN L+ GL K  + D A ++   ++ + + P+  +Y   ++G+
Sbjct: 533 LSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 215/419 (51%), Gaps = 23/419 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC++ + +KAK F+  +   G+KP+V +Y T+I+G    G + GA  +FD M 
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            RGV+ +   Y   I G  K+G    A  + E++  E  + P  VTYN +I+G C  G  
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM-KEIGLRPTAVTYNTLIDGYCNKGNL 312

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           +   +  D+M +        TY   IH L     ++ A+ + +EM E G+  D+VTYN +
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+CR G +K+ F L + M  KG     V+Y  LI  L + G++ +A  ++E +  K  
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D      LI+G C NG +++A  +L E                  MD+     +  T 
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKE------------------MDQMKVVPDEVTF 474

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+LM G  +  K+E A  L +EM  +G  P  +SYNTLI+G  K     +A+    EML 
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            G+ P ++TY+ LI GLC++++ D A +L  + + KG TP+   Y  LI G+   G VE
Sbjct: 535 IGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI---GNVE 590



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 22/435 (5%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V Y+++I   C+  R D+  E +D MK              +    K+   E A  +Y E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFE---LWEVMGRKGCLNVVSYNILIRGLLEN 323
           M    I    VT+N MI+  C+ GK+K+  E   L E +G K   NVV+YN +I G    
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKP--NVVTYNTIIHGYCSR 239

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           G+V+ A  I++L++ +    DS T+G  I+G+CK G L +A  +L +++E G        
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                    +G L  A    ++M + G      T N L++      K++ A  + KEMS 
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P  V+YN LING C+     +A++   EM+ KG +P  +TY+ LI  L +  ++  
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L  + ++KG  PD+ M+N LI G C+ G ++ A  +   M +   VP+ VT+NTLM 
Sbjct: 420 ADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQ 479

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  + G  + A E+   +    ++PD ISYN  + G      M DAF   ++ L  G  P
Sbjct: 480 GRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP 539

Query: 607 TTITWHILVRAVMNN 621
           T +T++ L++ +  N
Sbjct: 540 TLLTYNALIQGLCKN 554



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%)

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           T V Y+ LI   C+++R  +A+     M  KG  P +   + +++   +S + + A  L 
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  +      V  +NI+I+ LC  GK++ A +    M+     PN+VTYNT++ G    
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A  I++ +    ++PD  +Y   + G+C   ++ +A   L      G+ PT +T+
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 612 HILVRAVMNNG 622
           + L+    N G
Sbjct: 300 NTLIDGYCNKG 310


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 227/430 (52%), Gaps = 24/430 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   GV  NV  YNIL+     +G    A  +   +       PN VTYN ++   C+ G
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAG 59

Query: 221 RFDECLEMWDRMKKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
             D    +   M++    K +  T+ S ++GLCKAG +EGA +V+ EMV  G+  D V+Y
Sbjct: 60  ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N ++ G+C+ G + E   ++  M ++G + +VV++  LI    + G +++A+++   +RE
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +    +  T   LI+G CK G+L+                  DA   V  M K G + + 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLD------------------DALLAVEEMRKCGIQPSV 221

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N+L+NG+ +  +++ A  L +EM  K   P VV+Y+T+I+G CKV     A+   ++
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 281

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ML+KG  PD ITYS LI GLC+ K+++ A +L    LQ G  PD   Y  LI G C  G 
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE AL L+  M ++  +P++VTY+ L++GL K+    +A  +   +  E   PD I Y+ 
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 401

Query: 579 TLKGLCSCSR 588
            +  LC CS+
Sbjct: 402 LM--LC-CSK 408



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 258/513 (50%), Gaps = 34/513 (6%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   G+ P+VY+Y  ++  L   G L  A+ V  +M   G   N V YN L+  F + G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A+ +   +  E +  PN+VT+N M+NGLCK GR +   +++D M +     D  +Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + + G CK G +  +  V+ EM + G+  D VT+ ++I   C+AG +++   L   M  +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G  +N V++  LI G  + G +D+A+   E +R+         +  LING CK G ++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
            +++ E                  M+    K +  T +++++G+ +   L++A  L ++M
Sbjct: 241 RELIRE------------------MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            +KG  P  ++Y++LI GLC+ +R  +A    + ML+ G +PD  TY+ LI+G C+   +
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           + AL L  + ++KG  PDV  Y++LI+GL  + + ++A +L   +   + VP+ + Y+ L
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 402

Query: 545 M----DGLFKT------GDCDKAL-----EIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           M       FK+      G C K L     +++  +L+   + D   Y+I + G C    +
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             A  F    L  G  P + +   LVR +   G
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 264/537 (49%), Gaps = 43/537 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VET 168
           LC + + E+A   +  +   G  P+  +Y T++    ++G+L GA  V   M E G  + 
Sbjct: 20  LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP 79

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+V +N +++G  K G    A+++++ +V E  + P+VV+YN +++G CK G   E L +
Sbjct: 80  NLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAV 138

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D  T+ S IH  CKAGN+E A  +  +M E G+ ++ VT+ A+IDGFC+
Sbjct: 139 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 198

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + +     E M + G   +VV YN LI G  + G++D A  +   +  K    D  T
Sbjct: 199 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  +I+G CK G L+ A Q+  ++ + G                 E RL DA  L   M 
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + + +T  +L++G  +   +E A+ L  EM RKG  P VV+Y+ LINGL K  R  
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378

Query: 451 EAYSFVKEMLEKGWKPDMITYS---------------LLINGLCQSKKIDMALKLCCQFL 495
           EA+  + ++  +   PD I Y                 L+ G C    +  A K+    L
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            + +  D ++Y+ILIHG C  G V  AL  +  M +    PN  +  +L+ GLF+ G   
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 498

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC----RGILPTT 608
           +A    ++ +++ L    ++     K L   +R     + L D LC     G+LP++
Sbjct: 499 EA----DNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 251/492 (51%), Gaps = 23/492 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P ++ +  +++ LVK      A++   +M  +G++  +  +NILI+ F        A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+ VT N ++ GLC  G+  E L   D + +     D  +Y + I+GLC
Sbjct: 111 VAK-ILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169

Query: 253 KAGNVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLN 309
           K+G    A ++ R+ +E  + V  D + Y A+ID FC+   + + ++L+ E++ +K   N
Sbjct: 170 KSGETRAALQLLRK-IEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV++N LI G    G++ EA+ +   +   N N +  T  +LI+GLCK            
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK------------ 276

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 EG +  A S+++ M K G + N  T  SLM+G+    ++  A  +F  +S +G 
Sbjct: 277 ------EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P V SY+ +INGLCK +   EA    KEM  K   P+ +TYS LI+GLC+S +I     
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +   +G   ++  YN L++GLC   +V+ A+ L + MK     P++ TY TL+DGL 
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G    A  I+  +L +    +I  Y + + GLC      +A   L+     G +P  +
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510

Query: 610 TWHILVRAVMNN 621
           T+  L+ A+  N
Sbjct: 511 TYETLISALFKN 522



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 225/427 (52%), Gaps = 25/427 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG---V 166
           LC   + ++A  F + +  K    D  SYGT+INGL KSG+   AL +  ++   G   V
Sbjct: 133 LCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLV 190

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +V+ Y  +ID F K    + A +++  ++++  +YPNVVT+N +I G C  G+  E +
Sbjct: 191 RPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK-KIYPNVVTFNSLIYGFCIVGQLKEAV 249

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + + M  N    + +T+   I GLCK G V+ A  V   M++ G+  + VTY +++DG+
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
               ++ +   ++  +  +G   NV SY+++I GL +N  VDEA+ +++ +  KN   ++
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  LI+GLCK+                  GR++D   L++ ++  G   N  T NSL+
Sbjct: 370 VTYSSLIDGLCKS------------------GRISDVWDLIDEINNRGQPANIITYNSLL 411

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           NG  +  +++ AI L  +M  +G  P + +Y TL++GLCK  R  +A    +++L KG+ 
Sbjct: 412 NGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYP 471

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            ++  Y+++INGLC+    D AL L  Q    G  PD   Y  LI  L    K   A++L
Sbjct: 472 LNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531

Query: 526 YSNMKKR 532
              M  R
Sbjct: 532 LREMIAR 538



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 213/455 (46%), Gaps = 65/455 (14%)

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           F+  L M      N      F +   +  L K  + + A    ++M   GI  +  T+N 
Sbjct: 40  FNHILHM------NNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I+ F    ++   F +   + + G   + V+ N L+RGL  NGKV EA++  + +  K 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG------------------GEGRLADA 382
            + D  ++G LINGLCK+G    A+Q+L ++E                     +  + DA
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M       N  T NSL+ GF    +L+ A+ L  EMS    +P V ++N LI+G
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITY------------------------------- 471
           LCK     +A S +  M+++G +P+++TY                               
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 472 ----SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
               S++INGLC++K +D A+KL  +   K  TP+   Y+ LI GLC +G++ D   L  
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            +  R    N++TYN+L++GL K    DKA+ +   + +E ++PD+ +Y   + GLC   
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           R+ DA     D LC+G  P  I  +     VM NG
Sbjct: 454 RLKDAQRIYQDLLCKG-YPLNIRMY----TVMING 483



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 8/132 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++    KN   DKA+ +  +M +         +      LC+  + + A+R    L  K
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   ++  Y  +INGL K G    AL++  +M + G   + V Y  LI   FK     +A
Sbjct: 469 GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKA 528

Query: 190 KEIWERLVMETS 201
            ++   ++   S
Sbjct: 529 VKLLREMIARES 540


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 250/519 (48%), Gaps = 45/519 (8%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F++A  FL+ +      P+V +Y T+++G +K   L     + + M   G   N   +N 
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING-------------------- 215
           L+  +  + DY  A ++  R+       P  V YN+ I                      
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMT-TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 241

Query: 216 ---------------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                                LC  G+FD+  ++   M +     D+ TY   I  LC A
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             VE A  +++EM   G+  D  TY  +ID FC+AG I++   L+E M   GC   VV+Y
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI   L+  +V +A  I+  + +  C  +  T+G L++GLCK G ++KA ++  ++  
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI- 420

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G    AD+       D+H    N  T  +L++G  +A K+++A  L   M   GC P  
Sbjct: 421 -GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y+ LI+G CK  +   A     +M + G+ P + TY+ LI+ + +  ++D+A+K+  Q
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+   TP+V  Y  +I GLC  G+ E AL+L S M+++ C PN+VTY  L+DGL K G 
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            D +L+++  +  +   P+ ++Y + +  LC+   +  A
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 638



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 176/654 (26%), Positives = 298/654 (45%), Gaps = 85/654 (12%)

Query: 6   KRLLNLLKAEK-NPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           KR++N++  E  NP+ +L  +L  S   E  YA++  L + +      P  VV+   I  
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 221

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMP----------------------DKALDVFQRM- 99
           +   +K   P+ + L+  + YG+                          DKA  + + M 
Sbjct: 222 ICGQEKLPSPDLLDLAE-KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280

Query: 100 -------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     +      LC   + EKA      +   G+ PDVY+Y  +I+   K+G + 
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +F+EM   G    VV Y  LI  + K     +A +I+ R+V +    PN VTY  +
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGAL 399

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDS----------------FTYCSFIHGLCKAGN 256
           ++GLCK G   +  E++ ++       DS                 TY + + GLCKA  
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           V+ A  +   M+ SG   + + Y+A+IDGFC+AGKI    E++  M + G L +V +Y  
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI  + ++G++D A+ +   + + +C  +  T+  +I+GLC+ G   KA+++L+ +EE  
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE-- 577

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                            GC  N  T  +L++G  +A K++ ++ LF +MSRKGCSP  V+
Sbjct: 578 ----------------KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LIN LC      +A   + EM +  W   +  Y   I G   SK    +L +  +  
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEME 679

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-----TYNTLMDGLFK 550
             G  P   +Y +LI     AG++E A++L+  M +   VP+ V      Y +L+  L  
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCL 736

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
               ++A  +++ +      P++  +   +KGL    +  +A +     LC GI
Sbjct: 737 ASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ-----LCYGI 785



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 226/541 (41%), Gaps = 44/541 (8%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + L + G +P   +Y  ++  L  +G +     V  EM E G   +            K+
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G +  A ++ ER   +     + V    MI+GL +   FDE +    RM+ N    +  T
Sbjct: 89  GRWADALDMIEREDFKL----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + + G  K   +   +R+   M+  G   +   +N+++  +C        ++L   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 304 RKGCL-NVVSYNILIRGLLENGKV------DEAISIWELLREKNCNADSTTHGVLINGLC 356
             GC    V YNI I  +    K+      D A  I+  +   NC  +          LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
             G  +KA Q++ E+   G                   ++  A  L   M   G   + Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T   L++ F +A  +E A +LF+EM   GCSPTVV+Y  LI+   K ++  +A      M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL----------------QKGFTPDV 503
           ++ G +P+ +TY  L++GLC++  I  A ++  + +                +    P+V
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  L+ GLC A KV+ A +L   M    C PN + Y+ L+DG  K G  D A E++  
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +    P + +Y   +  +    R+  A + L+  L     P  +T+  ++  +   G 
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 624 S 624
           S
Sbjct: 565 S 565


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 253/549 (46%), Gaps = 62/549 (11%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + +  +GL  DV  Y T++ G  ++G +  A  V D M E GV+ NV  Y   I  + + 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                A +++E +V    V  +VVT + ++ GLC+ GRF E   ++  M K     +  T
Sbjct: 253 KGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-----FEL 298
           YC+ I  L KAG  +    +  EMV  G+ +D VTY A++D   + GK  E      F L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 299 WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            + +   G    V+Y +LI  L +   VDEA  +   + EK+ + +  T   +ING  K 
Sbjct: 372 SDNLSPNG----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 359 GYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKHGCKLNAYTC 401
           G L+KA +    ++E G        G L D          A  + + M   G K+N +  
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           +SL+NG  Q  K+E A+ LFK+ S  G S   V+Y TLI+GL K      A+ F +E+++
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +   PD + Y++ IN LC   K   A     +    G  PD + YN +I   C  G+   
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP---------- 571
           AL+L   MK  +  PNL+TYNTL+ GLF TG  +KA  + N ++     P          
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 572 -------------------------DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
                                    DI  YN  L+ LC       A   L + L  GI P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 607 TTITWHILV 615
            TIT++ L+
Sbjct: 728 DTITFNALI 736



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + ++ K  L       L P+  +Y  +I+ L K+ ++  A  V  EM E+ +  N
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ +I+GF K+G   +A E ++R++ E  + PNVVTY  +I+G  K    D  LE++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + + F   S ++GL + G +E A  ++++   SG+ +D V Y  +IDG  +A
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F+   E+M R    + V YN+ I  L   GK  EA S    +R      D +T+
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             +I   C+ G   KA+++L+E++                   G G +  A  L+N M  
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   ++ T   ++    Q+ +L+  + + + M   G    +  YNTL+  LC      +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++EML  G  PD IT++ LI G C+S  +D A     Q L +  +P++  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL S G++ +A  +   M+K    PN +TY+ L  G  K  +  +A+ ++  ++ +   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            + +YN  +        M+ A E   D   RG+ PT+ T+ ILV
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 251/525 (47%), Gaps = 56/525 (10%)

Query: 130 GLKPDVYSYGTV-INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           G+ P + S GT+ +  +   GD   AL+V D M  +G+  +VV YN L+ GF + G    
Sbjct: 163 GITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDA 222

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+ + + ++ E  V PNV TY   I   C+    +E  ++++ M +N    D  T  + +
Sbjct: 223 ARGVLD-MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGC 307
            GLC+ G    A  ++REM + G   + VTY  +ID   +AG+ KE   L  E++ R   
Sbjct: 282 AGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           +++V+Y  L+  L + GK DE           N + +  T+ VLI+ LCK   +++A Q+
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L E+EE                       N  T +S++NGF++   L+ A    + M  +
Sbjct: 402 LLEMEE------------------KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443

Query: 428 GCSPTVVSYNTLING-----------------LC---KVERF---------------GEA 452
           G +P VV+Y TLI+G                 LC   KV +F                EA
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +  K+    G   D + Y+ LI+GL ++  +  A K   + + +   PD  +YN+ I+ 
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  GK ++A    + M+     P+  TYNT++    + G+  KAL++ + +    ++P+
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +I+YN  + GL     +  A   LN+ +  G  P+++T   +++A
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 231/492 (46%), Gaps = 56/492 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A++ L  + EK + P+V ++ +VING VK G L  A      M ERG+  N
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LIDGFFK      A E++  ++ E  V  N    + ++NGL + G+ +E + ++
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
                +    D   Y + I GL KAG++  A +  +E+++  +  DAV YN  I+  C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE       M   G   +  +YN +I      G+  +A+ +   ++  +   +  T+
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLADAASLVNRMD----------- 390
             L+ GL   G + KA  +LNE+   G         R+  A S   R+D           
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 391 ----------------------------------KHGCKLNAYTCNSLMNGFIQASKLEN 416
                                               G   +  T N+L+ G  ++S L+N
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A   + +M  +  SP + ++NTL+ GL  V R GEA + + EM + G +P+ +TY +L  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 477 GLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           G   QS K++ A++L C+ + KGF P V+ YN LI     AG +  A +L+ +M+KR   
Sbjct: 808 GHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVH 866

Query: 536 PNLVTYNTLMDG 547
           P   TY+ L+ G
Sbjct: 867 PTSCTYDILVSG 878



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 225/532 (42%), Gaps = 64/532 (12%)

Query: 63  LIEIQ-KCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           L+E++ K   P  V  S VI  + K  + DKA +  + M E         +G       +
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            +  + A    + +  +G+K + +   +++NGL ++G +  A+A+F +    G+  + V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y  LIDG FK GD   A +  + L M+ ++ P+ V YNV IN LC  G+F E       M
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +    + D  TY + I   C+ G    A ++  EM  S I  + +TYN ++ G    G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 293 KEC-----------------------------------FELWEVMGRKGC-LNVVSYNIL 316
           ++                                     ++ E M   G   ++  YN L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA------------ 364
           ++ L  +G   +A  + E +       D+ T   LI G CK+ +L+ A            
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 365 ---IQILNEVEEGGE--GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
              I   N +  G E  GR+ +A +++  M+K G + N  T + L  G  + S    A+ 
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L+ EM  KG  P V +YN LI+   K     +A    K+M ++G  P   TY +L++G  
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +      K      +KGF+P     + +       G    A +L  N+ +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 161/365 (44%), Gaps = 23/365 (6%)

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
            D  + NA++   CR   ++    L     R      V+YNIL+  L ++     A ++ 
Sbjct: 71  ADPASLNALLYSHCRLRLLRPAIALL----RSSRPTTVAYNILLAALSDHA---HAPAVL 123

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLN----------------KAIQILNEVEEGGEG 377
             + ++    D  T   L+ GLC+NG ++                 +   L+ ++  G G
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFG 183

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
               A S+ +RM   G  ++    N+L+ GF +A +++ A  +   M   G  P V +Y 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
             I   C+ +   EA+   + M+  G   D++T S L+ GLC+  +   A  L  +  + 
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  P+   Y  LI  L  AG+ ++ L L   M  R  V +LVTY  LMD L K G  D+ 
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEV 363

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +     L + L P+ ++Y + +  LC    + +A + L +   + I P  +T+  ++  
Sbjct: 364 KDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423

Query: 618 VMNNG 622
            +  G
Sbjct: 424 FVKRG 428


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 253/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  + R L ++  KG   D  +   V+N + + G +  A+ +  ++   G E ++
Sbjct: 157 CRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADI 216

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ + +V      PN+VT+N +I  LC+ G F+   E+  
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMV-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + KE  EL   M +K C L+ V++NIL+    +NG VD  I + E +    C  D  T+ 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 396 TVINGFCKEGLIDEAVMLLKS------------------MSSCGCKPNTVSYTIVLKGLC 437

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC P  V++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K + AL+L    + KG +P+  +Y+ +   L   G+V   +Q++ N+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K      + V YN ++  L K  + D+A++ + +++     P+  +Y + +KGL S    
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L++   RG L   +  H
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 255/514 (49%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A   L+ +  KG  P    Y  ++    +SG    ++ V + M  +G   +
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N++++   ++G    A  +  +L        ++V+YN ++ GLC   R+ +  E+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M + +   +  T+ + I  LC+ G  E    V  +M E G   D   Y  +IDG C+ 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++   E+   M   G   NVV YN +++GL    +  EA  +   + +K+C  D  T 
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++  C+NG +++ I++L +                  M  HGC  +  T  +++NGF
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQ------------------MLSHGCMPDVITYTTVINGF 401

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L K MS  GC P  VSY  ++ GLC   R+ +A   + +M+++G  P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++ LIN LC+   ++ A++L  Q L  G +PD+  Y+ +I GL  AGK E+AL+L + 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +   PN + Y+++   L + G  +K ++++++I +  +R D + YN  +  LC    
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A +F    +  G +P   T+ +L++ + + G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN ++ G+ + G    A+ +   +     V PN  T+  ++ GLC  GR  + LE+ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M           Y   +   C++G    + RV   M   G  +D    N +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L   +   GC  ++VSYN +++GL    +  +   + + +   +C  +  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G K N    N+++ G   A + + A  L  EM +K C    V++N L++  C+      
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +++ML  G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLCSAG+  DA +L S M ++ C PN VT+NTL++ L K G  ++A+E+   +L     P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+ISY+  + GL    +  +A E LN  + +GI P TI +  +  A+   G
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 225/523 (43%), Gaps = 66/523 (12%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL + D  + + G A  P ++H IL          +  R+LE +  + C         V+
Sbjct: 130 ALEVLDEMSFK-GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEA--------------------------------- 107
            A  +    D+A+ + +++   FGCEA                                 
Sbjct: 189 NAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 108 -----------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                      G LCR   FE+    L  + E G  PD+  Y T+I+G+ K G L  A  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + + M   G++ NVVCYN ++ G      +  A+E+   +  +     + VT+N++++  
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFF 366

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G  D  +E+ ++M  +    D  TY + I+G CK G ++ A  + + M   G   + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           V+Y  ++ G C AG+  +  EL   M ++GC  N V++N LI  L + G V++AI + + 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +    C+ D  ++  +I+GL K G   +A+++LN               +VN+    G  
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN--------------VMVNK----GIS 528

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    +S+     +  ++   I +F  +         V YN +I+ LCK      A  F
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
              M+  G  P+  TY++LI GL        A +L  +   +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 253/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  + R L ++  KG   D  +   V+N + + G +  A+ +  ++   G E ++
Sbjct: 157 CRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADI 216

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ + +V      PN+VT+N +I  LC+ G F+   E+  
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMV-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + KE  EL   M +K C L+ V++NIL+    +NG VD  I + E +    C  D  T+ 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 396 TVINGFCKEGLIDEAVMLLKS------------------MSSCGCKPNTVSYTIVLKGLC 437

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC P  V++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K + AL+L    + KG +P+  +Y+ +   L   G+V   +Q++ N+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K      + V YN ++  L K  + D+A++ + +++     P+  +Y + +KGL S    
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L++   RG L   +  H
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 255/514 (49%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A   L+ +  KG  P    Y  ++    +SG    ++ V + M  +G   +
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N++++   ++G    A  +  +L        ++V+YN ++ GLC   R+ +  E+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M + +   +  T+ + I  LC+ G  E    V  +M E G   D   Y  +IDG C+ 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++   E+   M   G   NVV YN +++GL    +  EA  +   + +K+C  D  T 
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++  C+NG +++ I++L +                  M  HGC  +  T  +++NGF
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQ------------------MLSHGCMPDVITYTTVINGF 401

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L K MS  GC P  VSY  ++ GLC   R+ +A   + +M+++G  P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++ LIN LC+   ++ A++L  Q L  G +PD+  Y+ +I GL  AGK E+AL+L + 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +   PN + Y+++   L + G  +K ++++++I +  +R D + YN  +  LC    
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A +F    +  G +P   T+ +L++ + + G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN ++ G+ + G    A+ +   +     V PN  T+  ++ GLC  GR  + LE+ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M           Y   +   C++G    + RV   M   G  +D    N +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L   +   GC  ++VSYN +++GL    +  +   + + +   +C  +  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G K N    N+++ G   A + + A  L  EM +K C    V++N L++  C+      
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +++ML  G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLCSAG+  DA +L S M ++ C PN VT+NTL++ L K G  ++A+E+   +L     P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+ISY+  + GL    +  +A E LN  + +GI P TI +  +  A+   G
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 225/523 (43%), Gaps = 66/523 (12%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL + D  + + G A  P ++H IL          +  R+LE +  + C         V+
Sbjct: 130 ALEVLDEMSFK-GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEA--------------------------------- 107
            A  +    D+A+ + +++   FGCEA                                 
Sbjct: 189 NAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 108 -----------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                      G LCR   FE+    L  + E G  PD+  Y T+I+G+ K G L  A  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + + M   G++ NVVCYN ++ G      +  A+E+   +  +     + VT+N++++  
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFF 366

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G  D  +E+ ++M  +    D  TY + I+G CK G ++ A  + + M   G   + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           V+Y  ++ G C AG+  +  EL   M ++GC  N V++N LI  L + G V++AI + + 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +    C+ D  ++  +I+GL K G   +A+++LN               +VN+    G  
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN--------------VMVNK----GIS 528

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    +S+     +  ++   I +F  +         V YN +I+ LCK      A  F
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
              M+  G  P+  TY++LI GL        A +L  +   +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 250/519 (48%), Gaps = 45/519 (8%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F++A  FL+ +      P+V +Y T+++G +K   L     + + M   G   N   +N 
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING-------------------- 215
           L+  +  + DY  A ++  R+       P  V YN+ I                      
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMT-TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 241

Query: 216 ---------------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                                LC  G+FD+  ++   M +     D+ TY   I  LC A
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             VE A  +++EM   G+  D  TY  +ID FC+AG I++   L+E M   GC   VV+Y
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI   L+  +V +A  I+  + +  C  +  T+G L++GLCK G ++KA ++  ++  
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI- 420

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G    AD+       D+H    N  T  +L++G  +A K+++A  L   M   GC P  
Sbjct: 421 -GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y+ LI+G CK  +   A     +M + G+ P + TY+ LI+ + +  ++D+A+K+  Q
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+   TP+V  Y  +I GLC  G+ E AL+L S M+++ C PN+VTY  L+DGL K G 
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            D +L+++  +  +   P+ ++Y + +  LC+   +  A
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 638



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 177/662 (26%), Positives = 300/662 (45%), Gaps = 85/662 (12%)

Query: 6   KRLLNLLKAEK-NPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           KR++N++  E  NP+ +L  +L  S   E  YA++  L + +      P  VV+   I  
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 221

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMP----------------------DKALDVFQRM- 99
           +   +K   P+ + L+  + YG+                          DKA  + + M 
Sbjct: 222 ICGQEKLPSPDLLDLAE-KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280

Query: 100 -------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     +      LC   + EKA      +   G+ PDVY+Y  +I+   K+G + 
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +F+EM   G    VV Y  LI  + K     +A +I+ R+V +    PN VTY  +
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGAL 399

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDS----------------FTYCSFIHGLCKAGN 256
           ++GLCK G   +  E++ ++       DS                 TY + + GLCKA  
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           V+ A  +   M+ SG   + + Y+A+IDGFC+AGKI    E++  M + G L +V +Y  
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI  + ++G++D A+ +   + + +C  +  T+  +I+GLC+ G   KA+++L+ +EE  
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE-- 577

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                            GC  N  T  +L++G  +A K++ ++ LF +MSRKGCSP  V+
Sbjct: 578 ----------------KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LIN LC      +A   + EM +  W   +  Y   I G   SK    +L +  +  
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEME 679

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-----TYNTLMDGLFK 550
             G  P   +Y +LI     AG++E A++L+  M +   VP+ V      Y +L+  L  
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCL 736

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               ++A  +++ +      P++  +   +KGL    +  +A +     LC GI    + 
Sbjct: 737 ASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ-----LCYGICHEGVN 791

Query: 611 WH 612
           W 
Sbjct: 792 WQ 793



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 226/541 (41%), Gaps = 44/541 (8%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + L + G +P   +Y  ++  L  +G +     V  EM E G   +            K+
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G +  A ++ ER   +     + V    MI+GL +   FDE +    RM+ N    +  T
Sbjct: 89  GRWADALDMIEREDFKL----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + + G  K   +   +R+   M+  G   +   +N+++  +C        ++L   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 304 RKGCL-NVVSYNILIRGLLENGKV------DEAISIWELLREKNCNADSTTHGVLINGLC 356
             GC    V YNI I  +    K+      D A  I+  +   NC  +          LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
             G  +KA Q++ E+   G                   ++  A  L   M   G   + Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T   L++ F +A  +E A +LF+EM   GCSPTVV+Y  LI+   K ++  +A      M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL----------------QKGFTPDV 503
           ++ G +P+ +TY  L++GLC++  I  A ++  + +                +    P+V
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  L+ GLC A KV+ A +L   M    C PN + Y+ L+DG  K G  D A E++  
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +    P + +Y   +  +    R+  A + L+  L     P  +T+  ++  +   G 
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 624 S 624
           S
Sbjct: 565 S 565


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 252/494 (51%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+Y  +IN   +   L  ALAV  +M + G E N+V  + L++G+        A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++ + T   PN VT+N +I+GL    +  E + + DRM     + D  TY   ++
Sbjct: 171 VALVDQMFV-TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK G+ + A  +  +M +  +    + YN +IDG C+   + +   L++ M  KG   
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+Y+ LI  L   G+  +A  +   + E+  N D  T   LI+   K           
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK----------- 338

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  EG+L +A  L + M K     +  T +SL+NGF    +L+ A  +F+ M  K 
Sbjct: 339 -------EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P VV+YNTLI G CK +R  E     +EM ++G   + +TY++LI GL Q+   DMA 
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           ++  + +  G  P++  YN L+ GLC  GK+E A+ ++  +++    P + TYN +++G+
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  +   +++ ++  + ++PD+++YN  + G C      +A     +    G LP +
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 609 ITWHILVRAVMNNG 622
             ++ L+RA + +G
Sbjct: 572 GCYNTLIRARLRDG 585



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 233/451 (51%), Gaps = 20/451 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++  +A   ++ ++  G +P+  ++ T+I+GL        A+A+ D M  +G + ++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y ++++G  K+GD   A  +  ++  +  + P V+ YN +I+GLCK    D+ L ++ 
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+      +  TY S I  LC  G    A R+  +M+E  I  D  T++A+ID F + G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E  +L++ M ++    ++V+Y+ LI G   + ++DEA  ++E +  K+C  D  T+ 
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI G CK             VEEG E        +   M + G   N  T N L+ G  
Sbjct: 401 TLIKGFCK----------YKRVEEGME--------VFREMSQRGLVGNTVTYNILIQGLF 442

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           QA   + A  +FKEM   G  P +++YNTL++GLCK  +  +A    + +     +P + 
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I G+C++ K++    L C    KG  PDV  YN +I G C  G  E+A  L+  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           K+   +PN   YNTL+    + GD + + E+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAEL 593



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 254/493 (51%), Gaps = 22/493 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       +++ ++M   G+  N   Y+ILI+ F ++     A  +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    PN+VT + ++NG C   R  E + + D+M     + ++ T+ + IHGL 
Sbjct: 139 LGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NV 310
                  A  +   MV  G   D VTY  +++G C+ G     F L   M  +G L   V
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGV 256

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + YN +I GL +   +D+A+++++ +  K    +  T+  LI+ LC              
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN------------- 303

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR +DA+ L++ M +     + +T ++L++ F++  KL  A  L+ EM ++   
Sbjct: 304 -----YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++V+Y++LING C  +R  EA    + M+ K   PD++TY+ LI G C+ K+++  +++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  Q+G   +   YNILI GL  AG  + A +++  M      PN++TYNTL+DGL K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  +KA+ ++ ++   ++ P I +YNI ++G+C   ++ D ++   +   +G+ P  + 
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 611 WHILVRAVMNNGA 623
           ++ ++      G+
Sbjct: 539 YNTMISGFCRKGS 551



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 220/465 (47%), Gaps = 60/465 (12%)

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           NGL +  + D+ + ++  M K+        +   +  + K    +    +  +M   GI 
Sbjct: 55  NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 274 VDAVTYNAMI-----------------------------------DGFCRAGKIKECFEL 298
            +  TY+ +I                                   +G+C + +I E   L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   G   N V++N LI GL  + K  EA+++ + +  K C  D  T+GV++NGLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 358 NGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNAYT 400
            G  + A  +LN++E+G             +G      + DA +L   M+  G + N  T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            +SL++      +  +A  L  +M  +  +P V +++ LI+   K  +  EA     EM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++   P ++TYS LING C   ++D A ++    + K   PDV  YN LI G C   +VE
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           + ++++  M +R  V N VTYN L+ GLF+ GDCD A EI+  ++ + + P+I++YN  L
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 581 KGLCSCSRMSDA---FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC   ++  A   FE+L  +    + PT  T++I++  +   G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRS---KMEPTIYTYNIMIEGMCKAG 515


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 277/563 (49%), Gaps = 31/563 (5%)

Query: 90  DKALD-VFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKG---LKPDVYS 137
           D A+D VF+RM E      +F   A I  LC +++ ++A   L  +   G     P+V S
Sbjct: 143 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVS 202

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVI+G  K G++  A  +F EM  +G+  +VV YN LIDG  K     +A  I + + 
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM- 261

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  V P+  TYN+MI G C  G+ +E + +  +M  +  + D  TY   I   CK G  
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A  V+  MV  G   ++  Y+ ++ G+   G + +  +L ++M R G      ++NIL
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGG 375
           I    ++G VD+A++ +  +R+     D  ++  +I+ LCK G +  A+   N+ V EG 
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 376 EGRLADAASLVN----------------RMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
              +    SL++                 M   G   +A   N++M+   +  ++  A  
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F  +   G  P VVSYNTLI+G C V +  E+   +  M+  G +PD  TY+ L+NG  
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++ +++ AL L  +  +K         NI++HGL  AG++  A +LY  M  R     + 
Sbjct: 562 KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIE 621

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYNT++ GL +    D+AL ++  +  +    D+ +++I +  L    R+ +A    +  
Sbjct: 622 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAM 681

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           + RG +P  IT+ +++++ +  G
Sbjct: 682 VLRGPVPDVITYSLMIKSHIEEG 704



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 283/576 (49%), Gaps = 58/576 (10%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPH---------------------- 39
           V S   L+  L  EK    AL L    T + GY  SP+                      
Sbjct: 162 VFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYF 221

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQ-AYGKNSMPD-KALDVFQ 97
           LFH ++ + + P +V + S I  L + Q      D A++++Q  + K  MPD +  ++  
Sbjct: 222 LFHEMMGQGLPPDVVTYNSLIDGLCKAQAM----DKAVAILQHMFDKGVMPDTRTYNIMI 277

Query: 98  RMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV 157
           R            C   Q E+A R L  +   GL+PDV +Y  +I    K G    A +V
Sbjct: 278 RG----------YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           FD M  +G + N   Y+IL+ G+  KG  +  +++ + ++ +   + +   +N++I    
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR-AFNILICAYA 386

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           K G  D+ +  +  M++N    D  +Y + IH LCK G VE A   + +MV  G+  + +
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 278 TYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           ++ ++I G C  G+ K+  EL +E++ R    + +  N ++  L + G+V EA   ++++
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
                  D  ++  LI+G C  G ++++I+ L+                  RM   G + 
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLD------------------RMVSIGLRP 548

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +++T NSL+NG+ +  ++E+A+ L++EM RK      ++ N +++GL +  R   A    
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELY 608

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
            +M+++G +  + TY+ ++ GLC++  +D AL++      K F  DV  ++I+I+ L   
Sbjct: 609 MKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKV 668

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           G++++A  L+S M  R  VP+++TY+ ++    + G
Sbjct: 669 GRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEG 704



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 226/473 (47%), Gaps = 21/473 (4%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V  N LI G         A ++  R + E    P+V +YN +I GLC   +  E LE+  
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186

Query: 231 RMKKNER---EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            M  +       +  +Y + I G  K G V+ A  ++ EM+  G+  D VTYN++IDG C
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +A  + +   + + M  KG + +  +YNI+IRG    G+++EA+ + + +       D  
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRM 389
           T+ +LI   CK G   +A  + + +   G+                 G L D   L++ M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G        N L+  + +   ++ A+  F EM + G  P VVSY+T+I+ LCK  R 
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A     +M+ +G  P++I+++ LI+GLC   +     +L  + + +G  PD    N +
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  LC  G+V +A   +  +      P++V+YNTL+DG    G  D++++  + ++   L
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           RPD  +YN  L G     R+ DA     +   + +    IT +I++  +   G
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAG 599



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 230/473 (48%), Gaps = 31/473 (6%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           A ++FDS  R+ G   +  ++H +L        ++ V  +L+L+ I+     E  A ++ 
Sbjct: 324 ARSVFDSMVRK-GQKPNSTIYHILLHGYATKGALIDVRDLLDLM-IRDGIPFEHRAFNIL 381

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I AY K+   DKA+  F  M +         +     ILC+  + E A    N +  +GL
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            P++ S+ ++I+GL   G+      +  EM  RG+  + +  N ++D   K+G  + A++
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
            ++ +V+   V P+VV+YN +I+G C  G+ DE ++  DRM       DS+TY S ++G 
Sbjct: 502 FFD-MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
            K G VE A  +YREM    +   A+T N M+ G  +AG+I    EL+  M  +G  L +
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI 620

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN ++ GL EN  VDEA+ ++E LR K    D  T  ++IN L K G +++A  + + 
Sbjct: 621 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSA 680

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           +   G                 EG L ++ +L   M+K+GC  +++  N ++   ++   
Sbjct: 681 MVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGD 740

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           +  A     ++  K  S    +   LI  +   +++ +   F+ E      +P
Sbjct: 741 VRRAGTYLTKIDEKNFSLEASTAALLIP-IVSEKKYQKEVKFLPEKYHSFMQP 792



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 23/331 (6%)

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M R G  +      ILIR     G++D A + + L  +      + T   LI GLC
Sbjct: 78  LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLV-NRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
                                R  DA  +V  RM + G   + ++ N+L+ G     K +
Sbjct: 138 DGN------------------RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQ 179

Query: 416 NAIFLFKEMSRKG---CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            A+ L   M+  G   CSP VVSYNT+I+G  K     +AY    EM+ +G  PD++TY+
Sbjct: 180 EALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYN 239

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+GLC+++ +D A+ +      KG  PD   YNI+I G CS G++E+A++L   M   
Sbjct: 240 SLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 299

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++VTY+ L+    K G C +A  +++ ++ +  +P+   Y+I L G  +   + D 
Sbjct: 300 GLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 359

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            + L+  +  GI      ++IL+ A   +GA
Sbjct: 360 RDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 135/262 (51%), Gaps = 12/262 (4%)

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN-------AIF 419
           ILN    G  GR  DA +L + +       + +  NS++    +A    +       A+ 
Sbjct: 19  ILNRHRSGSLGR-EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVS 77

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF  M R G +        LI   C V R   A++     L+ GW+   +T + LI GLC
Sbjct: 78  LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137

Query: 480 QSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR---NCV 535
              + D A+ +  + + + G+TPDV  YN LI GLC   K ++AL+L  +M      NC 
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PN+V+YNT++DG FK G+ DKA  +++ ++ + L PD+++YN  + GLC    M  A   
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257

Query: 596 LNDALCRGILPTTITWHILVRA 617
           L     +G++P T T++I++R 
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRG 279


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 247/492 (50%), Gaps = 20/492 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+   +++   K+ +  GA  V  EM +R V  +VV +N+LID  F+ GD   A  + 
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +     + P +VTYN ++ GLCK  RFD+  E++  M +     D  ++   I G C+
Sbjct: 216 DSMA-NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVS 312
            G V+ A + Y+EM    +  D V+++ +I  F R G++      L E+ G     + V 
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ++I G    G + EA+ + + +    C  D  T+  L+NGLCK               
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK--------------- 379

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              + RL DA  L+N M++ G   +  T  +L++G+ +    ENA+ LF  + R+   P 
Sbjct: 380 ---QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+YN+LI+G+C+     +A     +M  +   P+ ITYS+LI+  C+  +++ A     
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + ++KG  P++  YN +I G C +G V+   Q    M++ N  P+L+T+NTL+ G  K  
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           +   A  ++N + +E +RPD ++YN+ + G      M DA          GI P   T+ 
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYM 616

Query: 613 ILVRAVMNNGAS 624
            L+   +  G S
Sbjct: 617 SLINGHVTAGNS 628



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 278/579 (48%), Gaps = 28/579 (4%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
            P +F  ++R     +          L+   +   P   + +++    +   P  A + +
Sbjct: 86  QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAY 145

Query: 97  QRM----NEIFGCEAGIL----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           + +    +E+      I+    C+  +F+ A   ++ + ++ + PDV ++  +I+   ++
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD+  A+A+ D M  RG++  +V YN ++ G  K   + +AKE++ R + + SV P+V +
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF-RTMDQCSVAPDVRS 264

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           +N++I G C+ G   E ++ +  M+      D  ++   I    + G ++ A    REM 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
             G+  D V Y  +I GFCRAG + E   + + M   GCL +VV+YN L+ GL +  ++ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A  +   + E+    D  T   LI+G C+ G    A+Q+ + +             L  
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL-------------LRQ 431

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           R+     + +  T NSL++G  +   L  A  L+ +M  +   P  ++Y+ LI+  C+  
Sbjct: 432 RL-----RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  +A+ F+ EM++KG  P++ TY+ +I G C+S  +    +   +  Q    PD+  +N
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LIHG      +  A  +++ M+K    P+ VTYN +++G  + G+   A  ++  + + 
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            + PD  +Y   + G  +      AF+  ++ + RG  P
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 227/438 (51%), Gaps = 21/438 (4%)

Query: 188 RAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           + +E +E  RL+++  V       N ++  L + G      E +  +  ++ E +++T  
Sbjct: 102 KPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLN 161

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             +H  CK    +GA+ V  EM +  +F D VT+N +ID   RAG +     L + M  +
Sbjct: 162 IMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR 221

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G    +V+YN +++GL ++ + D+A  ++  + + +   D  +  +LI G C+ G + +A
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA 281

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           ++   E++        D  S              ++C  L+  F +  ++++A    +EM
Sbjct: 282 VKFYKEMQH--RYVTPDVVS--------------FSC--LIGLFSRRGEMDHAGAYLREM 323

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P  V Y  +I G C+     EA     EM+  G  PD++TY+ L+NGLC+  ++
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             A KL  +  ++G TPD+  +  LIHG C  G  E+ALQL+  + ++   P++VTYN+L
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSL 443

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DG+ + GD  KA E+W+ +    + P+ I+Y+I +   C   ++ DAF FL++ + +G 
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503

Query: 605 LPTTITWHILVRAVMNNG 622
           LP   T++ +++    +G
Sbjct: 504 LPNIRTYNSIIKGYCRSG 521



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 233/482 (48%), Gaps = 31/482 (6%)

Query: 67  QKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQF 116
           ++C  P+ V  +V I A  +    D A+ +   M    G + GI         LC+ R+F
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN-RGLKPGIVTYNSVLKGLCKHRRF 243

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           +KAK    ++ +  + PDV S+  +I G  + G++  A+  + EM  R V  +VV ++ L
Sbjct: 244 DKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL 303

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I  F ++G+ M     + R +    + P+ V Y ++I G C+ G   E L + D M    
Sbjct: 304 IGLFSRRGE-MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D  TY + ++GLCK   +  AE++  EM E G+  D  T+  +I G+CR G  +   
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           +L++ + R+    +VV+YN LI G+   G + +A  +W+ +  +    +  T+ +LI+  
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C+ G +  A   L+E                  M K G   N  T NS++ G+ ++  ++
Sbjct: 483 CEKGQVEDAFGFLDE------------------MVKKGNLPNIRTYNSIIKGYCRSGNVK 524

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
                 ++M +    P ++++NTLI+G  K E    A++    M ++  +PD +TY+++I
Sbjct: 525 KGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMII 584

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           NG  +   +  A ++       G  PD   Y  LI+G  +AG  + A QL+  M  R   
Sbjct: 585 NGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFA 644

Query: 536 PN 537
           P+
Sbjct: 645 PD 646


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 253/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  + R L ++  KG   D  +   V+N + + G +  A+ +  ++   G E ++
Sbjct: 157 CRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADI 216

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ + +V      PN+VT+N +I  LC+ G F+   E+  
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMV-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + KE  EL   M +K C L+ V++NIL+    +NG VD  I + E +    C  D  T+ 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 396 TVINGFCKEGLIDEAVMLLKS------------------MSSCGCKPNTVSYTIVLKGLC 437

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC P  V++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K + AL+L    + KG +P+  +Y+ +   L   G+V   +Q++ N+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K      + V YN ++  L K  + D+A++ + +++     P+  +Y + +KGL S    
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L++   RG L   +  H
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 255/514 (49%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A   L+ +  KG  P    Y  ++    +SG    ++ V + M  +G   +
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N++++   ++G    A  +  +L        ++V+YN ++ GLC   R+ +  E+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M + +   +  T+ + I  LC+ G  E    V  +M E G   D   Y  +IDG C+ 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++   E+   M   G   NVV YN +++GL    +  EA  +   + +K+C  D  T 
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++  C+NG +++ I++L +                  M  HGC  +  T  +++NGF
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQ------------------MLSHGCMPDVITYTTVINGF 401

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L K MS  GC P  VSY  ++ GLC   R+ +A   + +M+++G  P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++ LIN LC+   ++ A++L  Q L  G +PD+  Y+ +I GL  AGK E+AL+L + 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +   PN + Y+++   L + G  +K ++++++I +  +R D + YN  +  LC    
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A +F    +  G +P   T+ +L++ + + G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN ++ G+ + G    A+    RL     V PN  T+  ++ GLC  GR  + LE+ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAAR----RLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M           Y   +   C++G    + RV   M   G  +D    N +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L   +   GC  ++VSYN +++GL    +  +   + + +   +C  +  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G K N    N+++ G   A + + A  L  EM +K C    V++N L++  C+      
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +++ML  G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLCSAG+  DA +L S M ++ C PN VT+NTL++ L K G  ++A+E+   +L     P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+ISY+  + GL    +  +A E LN  + +GI P TI +  +  A+   G
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 221/523 (42%), Gaps = 66/523 (12%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL + D  + + G A  P ++H IL          +  R+LE +  + C         V+
Sbjct: 130 ALEVLDEMSFK-GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEA--------------------------------- 107
            A  +    D+A+ + +++   FGCEA                                 
Sbjct: 189 NAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 108 -----------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                      G LCR   FE+    L  + E G  PD+  Y T+I+G+ K G L  A  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + + M   G++ NVVCYN ++ G      +  A+E+   +  +     + VT+N++++  
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFF 366

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G  D  +E+ ++M  +    D  TY + I+G CK G ++ A  + + M   G   + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           V+Y  ++ G C AG+  +  EL   M ++GC  N V++N LI  L + G V++AI + + 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +    C+ D  ++  +I+GL                  G  G+  +A  L+N M   G  
Sbjct: 487 MLVNGCSPDLISYSTVIDGL------------------GKAGKTEEALELLNVMVNKGIS 528

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    +S+     +  ++   I +F  +         V YN +I+ LCK      A  F
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
              M+  G  P+  TY++LI GL        A +L  +   +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 253/503 (50%), Gaps = 20/503 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  + R L ++  KG   D  +   V+N + + G +  A+ +  ++   G E ++
Sbjct: 157 CRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADI 216

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+ + +V      PN+VT+N +I  LC+ G F+   E+  
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMV-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G++E A  +   M   G+  + V YN ++ G C A 
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + KE  EL   M +K C L+ V++NIL+    +NG VD  I + E +    C  D  T+ 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 396 TVINGFCKEGLIDEAVMLLKS------------------MSSCGCKPNTVSYTIVLKGLC 437

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +  +A  L  +M ++GC P  V++NTLIN LCK     +A   +K+ML  G  PD+I
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K + AL+L    + KG +P+  +Y+ +   L   G+V   +Q++ N+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K      + V YN ++  L K  + D+A++ + +++     P+  +Y + +KGL S    
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 590 SDAFEFLNDALCRGILPTTITWH 612
            +A E L++   RG L   +  H
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 255/514 (49%), Gaps = 20/514 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A   L+ +  KG  P    Y  ++    +SG    ++ V + M  +G   +
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N++++   ++G    A  +  +L        ++V+YN ++ GLC   R+ +  E+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M + +   +  T+ + I  LC+ G  E    V  +M E G   D   Y  +IDG C+ 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++   E+   M   G   NVV YN +++GL    +  EA  +   + +K+C  D  T 
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++  C+NG +++ I++L +                  M  HGC  +  T  +++NGF
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQ------------------MLSHGCMPDVITYTTVINGF 401

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L K MS  GC P  VSY  ++ GLC   R+ +A   + +M+++G  P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T++ LIN LC+   ++ A++L  Q L  G +PD+  Y+ +I GL  AGK E+AL+L + 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +   PN + Y+++   L + G  +K ++++++I +  +R D + YN  +  LC    
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              A +F    +  G +P   T+ +L++ + + G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN ++ G+ + G    A+    RL     V PN  T+  ++ GLC  GR  + LE+ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAAR----RLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M           Y   +   C++G    + RV   M   G  +D    N +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L   +   GC  ++VSYN +++GL    +  +   + + +   +C  +  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LC+NG   +  ++L ++ E G                 EG L  A  ++NRM  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +G K N    N+++ G   A + + A  L  EM +K C    V++N L++  C+      
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               +++ML  G  PD+ITY+ +ING C+   ID A+ L       G  P+   Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLCSAG+  DA +L S M ++ C PN VT+NTL++ L K G  ++A+E+   +L     P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D+ISY+  + GL    +  +A E LN  + +GI P TI +  +  A+   G
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 221/523 (42%), Gaps = 66/523 (12%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL + D  + + G A  P ++H IL          +  R+LE +  + C         V+
Sbjct: 130 ALEVLDEMSFK-GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEA--------------------------------- 107
            A  +    D+A+ + +++   FGCEA                                 
Sbjct: 189 NAICEQGCVDEAVGLLRKL-AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 108 -----------GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
                      G LCR   FE+    L  + E G  PD+  Y T+I+G+ K G L  A  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           + + M   G++ NVVCYN ++ G      +  A+E+   +  +     + VT+N++++  
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFF 366

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G  D  +E+ ++M  +    D  TY + I+G CK G ++ A  + + M   G   + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           V+Y  ++ G C AG+  +  EL   M ++GC  N V++N LI  L + G V++AI + + 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +    C+ D  ++  +I+GL                  G  G+  +A  L+N M   G  
Sbjct: 487 MLVNGCSPDLISYSTVIDGL------------------GKAGKTEEALELLNVMVNKGIS 528

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N    +S+     +  ++   I +F  +         V YN +I+ LCK      A  F
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
              M+  G  P+  TY++LI GL        A +L  +   +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 258/497 (51%), Gaps = 20/497 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  +F+KA   ++ + ++ + PDV ++  +I+   ++GD+  A+A+ D M  +G++  +
Sbjct: 168 CKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGI 227

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N ++ G  K   + +AKE++ R + + SV P+V ++N++I G C+ G  +E ++ + 
Sbjct: 228 VTFNSVLKGLCKHRRFDKAKEVF-RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYK 286

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M++     D  ++   I      G ++ A    REM   G+  D V Y  +I GFCRAG
Sbjct: 287 EMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   + + M   GCL +VV+YN L+ GL +  ++ +A  +   ++E+    D  T  
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G C++G   KA+Q+ + +             L  R+     + +    NSL++G  
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTL-------------LHQRL-----RPDVVAYNSLIDGMC 448

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L  A  L+ +M  +   P  V+Y+ LI+  C+  +  EA+ F+ EM+ KG  P+++
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ +I G C+S  +    +   + +Q    PD+  +N LIHG      +  A  +++ M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +K    P+ VTYN +++G  + G+ ++A  ++  +    + PD  +Y   + G  +    
Sbjct: 569 EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS 628

Query: 590 SDAFEFLNDALCRGILP 606
            +AF+  ++ + RG  P
Sbjct: 629 KEAFQLHDEMMHRGFAP 645



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 243/492 (49%), Gaps = 20/492 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+   +++   KS +   A  V  EM +R V  +VV +N+LID  F+ GD   A  + 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +     + P +VT+N ++ GLCK  RFD+  E++  M +     D  ++   I G C+
Sbjct: 216 DSMA-NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVS 312
            G VE A + Y+EM + G+  D V+++ +I  F   GK+      L E+ G     + V 
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ++I G    G + EA+ + + +    C  D  T+  L+NGLCK               
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK--------------- 379

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              + RL DA  L+N M + G   +  T  +L++G+ +    E A+ LF  +  +   P 
Sbjct: 380 ---QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+YN+LI+G+C+     +A     +M  +   P+ +TYS+LI+  C+  +++ A     
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + + KG  P++  YN +I G C +G V+   Q    M + N +P+L+T+NTL+ G  K  
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           +   A  ++N + +E ++PD ++YN+ + G      M +A          GI P   T+ 
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYM 616

Query: 613 ILVRAVMNNGAS 624
            L+   +  G S
Sbjct: 617 SLINGHVTAGNS 628



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 18/409 (4%)

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E +  +  ++ E +++T    +H  CK+   + A+ V  EM +  +F D VT+N +ID  
Sbjct: 143 EAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDAR 202

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            RAG +     L + M  KG    +V++N +++GL ++ + D+A  ++  + + +   D 
Sbjct: 203 FRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDV 262

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            +  +LI G C+ G + +A++   E+++ G                  G++  AA+ +  
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   +      ++ GF +A  +  A+ +  EM   GC P VV+YNTL+NGLCK  R
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             +A   + EM E+G  PD+ T++ LI+G C+    + AL+L    L +   PDV  YN 
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI G+C  G +  A +L+ +M  R   PN VTY+ L+D   + G  ++A    + ++ + 
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             P+I++YN  +KG C    +    +FL   +   ILP  IT++ L+  
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 226/445 (50%), Gaps = 22/445 (4%)

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
           C ++L+    ++G   R  EI   L + +S  P    ++++I    +  +  E  E +  
Sbjct: 56  CQSLLLRMSRRRGASRR--EIVSSL-LASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRL 112

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           +  +     +    + +  L +AG    AE  YR ++ S   V+A T N M+  +C++ +
Sbjct: 113 LLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLE 172

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
             +   +   M ++    +VV++N+LI      G VD AI++ + +  K       T   
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           ++ GLCK+   +KA ++                     MD+     +  + N L+ GF +
Sbjct: 233 VLKGLCKHRRFDKAKEVFRA------------------MDQCSVAPDVRSFNILIGGFCR 274

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             ++E A+  +KEM ++G +P VVS++ LI       +   A ++++EM   G  PD + 
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+++I G C++  +  AL++  + +  G  PDV  YN L++GLC   ++ DA +L + MK
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           +R   P+L T+ TL+ G  + G+ +KAL++++ +L +RLRPD+++YN  + G+C    ++
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 591 DAFEFLNDALCRGILPTTITWHILV 615
            A E  +D   R I P  +T+ IL+
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILI 479


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 272/553 (49%), Gaps = 39/553 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR    +  +R +++L   G   DV  + T+I+G  K+G++  AL + + M + G+ ++
Sbjct: 122 FCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSD 181

Query: 170 VVCYNILIDGFFKKGDYMRAK----EIWERLVMETSVYPNV----------------VTY 209
           +V YN LI+GF K+G+Y +AK    EI E   ++ SV+ N+                +TY
Sbjct: 182 IVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITY 241

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             +I+  CK    +E   +++ M  N    D  TY S ++GLCK G +  A+ + REM +
Sbjct: 242 TTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKK 301

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDE 328
            G+  + V Y  +ID   +AG   E F     +  +G  L++V    L+ GL ++ K  E
Sbjct: 302 MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKE 361

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------- 373
           A  ++  L + N   +S T+  LI+G CK G + +   +L E+EE               
Sbjct: 362 AEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIIN 421

Query: 374 --GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               +G L +A +++ +M       NAY    L++G+ +A K E A  L+ EM   G   
Sbjct: 422 GYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKV 481

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V ++ L+N L + +R  EA   +K++  +G   D + Y+ L++G  ++ K   AL + 
Sbjct: 482 NNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMV 541

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  +K    DV  YN+LI+GL   GK E A  +YS M +    PN  TYN ++    K 
Sbjct: 542 EEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQ 600

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ D ALE+WN +   ++ P  I+ N  + GL     +  A   LN+    GI P  +  
Sbjct: 601 GELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIH 660

Query: 612 HILVRAVMNNGAS 624
            +L+ A   +G +
Sbjct: 661 RVLLNASSKSGKA 673



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 274/542 (50%), Gaps = 56/542 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + ++A+    +L +  L P+  +Y  +I+G  K GD+    ++  EM E+ +  N
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ Y+ +I+G+ KKG    A  + +++ ++ ++ PN   Y ++I+G CK G+ +   +++
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKM-LDQNIIPNAYVYAILIDGYCKAGKQEIATDLY 471

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK +  + ++  +   ++ L +   ++ AE + +++   G+ +D V Y +++DGF +A
Sbjct: 472 NEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKA 531

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK      + E M  K    +VV+YN+LI GLLE+GK  EA S++  + E     +  T+
Sbjct: 532 GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATY 590

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I   CK G L+ A+++ NE                  M  H    ++ TCN+L+ G 
Sbjct: 591 NIMIKAYCKQGELDNALELWNE------------------MKSHKIMPSSITCNTLVVGL 632

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVV---------------------------------- 434
            +A ++E A+ +  EMS  G  P +V                                  
Sbjct: 633 SEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQ 692

Query: 435 -SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +YN LI   C++    +A S +K M+  G+  D +TY+ LI G C+S  +  AL    Q
Sbjct: 693 EAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQ 752

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G +P++  YN+L+ GL  AG + +  +L+  MK+    P+  TY+TL+ G  K G+
Sbjct: 753 MLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGN 812

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +++ ++  ++ +   P   +YN+ +       +M  A E LN+   RG+ P++ T+ I
Sbjct: 813 KKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDI 872

Query: 614 LV 615
           L+
Sbjct: 873 LI 874



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 255/540 (47%), Gaps = 28/540 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------CRKRQFEKAKRFLNSLWEK 129
           +++    K+S P +A D+F+ ++++      I         C+    E+ +  L  + EK
Sbjct: 348 TLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK 407

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+V +Y ++ING  K G L  A+ V  +M ++ +  N   Y ILIDG+ K G    A
Sbjct: 408 HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIA 467

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +++  + + + +  N V ++V++N L +  R DE  E+   +       D   Y S + 
Sbjct: 468 TDLYNEMKL-SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMD 526

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
           G  KAG    A  +  EM E  I  D VTYN +I+G    GK  E   ++  M   G   
Sbjct: 527 GFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAP 585

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +YNI+I+   + G++D A+ +W  ++       S T   L+ GL + G + KA+ +L
Sbjct: 586 NQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVL 645

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           NE+   G                  G+      +  ++   G K+N    N+L+  F + 
Sbjct: 646 NEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRL 705

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
              + A  + K M R G     V+YN LI G C+     +A +   +ML +G  P+++TY
Sbjct: 706 RMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +LL+ GL  +  +    +L  +  + G  PD + Y+ LI G    G  +++++LY  M  
Sbjct: 766 NLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVA 825

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +  VP   TYN L+    K G  D+A E+ N +    + P   +Y+I + G C+ S+  D
Sbjct: 826 QGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPD 885



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 233/459 (50%), Gaps = 8/459 (1%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M +  +   ++ +N LI  F   G   +  +I+  ++  ++V PNV T+NV+++  CK G
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLC-SAVPPNVYTHNVLVHAWCKMG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
                L   D ++  + E D+ TY + I G C+ G V  A      MV+     D +T N
Sbjct: 60  NLILAL---DLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCN 116

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++ GFCR G  K    + + +   G C +V+ +N LI G  + G++  A+ + E +R++
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG---GEGRLADAASLVNRMDKHGCKL 396
              +D  ++  LING CK G  +KA  +L+E+ E     +    +    + + D    + 
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  T  ++++ + +   LE A  L++EM   G  P VV+Y++++NGLCK  R  EA   +
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +EM + G  P+ + Y+ LI+ L ++     A     Q + +G T D+ M   L+ GL  +
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
            K ++A  ++  + K N +PN +TY  L+DG  K GD ++   +   + E+ + P++I+Y
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  + G      + +A   +   L + I+P    + IL+
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILI 455



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 263/567 (46%), Gaps = 79/567 (13%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+VY++  +++   K G+L+ AL   D +    VE + V YN +I GF + G   +A
Sbjct: 40  AVPPNVYTHNVLVHAWCKMGNLILAL---DLLRNVDVEVDTVTYNTVIWGFCQHGLVNQA 96

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
                 +V + + + + +T N+++ G C+ G       + D +      KD   + + I 
Sbjct: 97  FGFLSIMVKKDTCF-DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLID 155

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC----FELWEVMGRK 305
           G CKAG +  A  +   M + G+  D V+YN +I+GFC+ G+  +      E+ E  G K
Sbjct: 156 GYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVK 215

Query: 306 GCL------------------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             +                  ++++Y  +I    +   ++EA +++E +       D  T
Sbjct: 216 DSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVT 275

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCNS--- 403
           +  ++NGLCK+G L++A ++L E+++ G +       +L++ + K G    A+ C S   
Sbjct: 276 YSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLV 335

Query: 404 -------------LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                        L++G  ++SK + A  +F+ +S+    P  ++Y  LI+G CKV    
Sbjct: 336 VRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDME 395

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
              S ++EM EK   P++ITYS +ING  +   +D A+ +  + L +   P+  +Y ILI
Sbjct: 396 RVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILI 455

Query: 511 HGLCSAGKVEDALQLYSNMK-----------------------------------KRNCV 535
            G C AGK E A  LY+ MK                                    R  +
Sbjct: 456 DGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLL 515

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            + V Y +LMDG FK G    AL +   + E+ +  D+++YN+ + GL    +  +A   
Sbjct: 516 LDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSV 574

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
            +  +  G+ P   T++I+++A    G
Sbjct: 575 YSGMIEMGLAPNQATYNIMIKAYCKQG 601



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 36/359 (10%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGK 325
           M +  I    + +N +I  F   G + +  +++ E++      NV ++N+L+    + G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           +   I   +LLR  +   D+ T+  +I G C++G +N+A   L+                
Sbjct: 61  L---ILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLS---------------- 101

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M K     +  TCN L+ GF +    +    +   +   G    V+ +NTLI+G CK
Sbjct: 102 --IMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCK 159

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
                 A   V+ M ++G   D+++Y+ LING C+  + D A  L  +  +     D   
Sbjct: 160 AGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVF 219

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           +NI           +D ++   N+   N   +L+TY T++    K    ++A  ++  ++
Sbjct: 220 FNI-----------DDRIKKDDNL---NLEADLITYTTIISTYCKQHGLEEARALYEEMI 265

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
                PD+++Y+  + GLC   R+S+A E L +    G+ P  + +  L+ ++   G++
Sbjct: 266 INGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSA 324


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 281/563 (49%), Gaps = 26/563 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           ++I AY K+   D    ++++M       ++  C + +  LCR  +  +A   L  ++  
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P+  SY T+I+ L+KSG ++ A     +M  RG+  ++V    ++DG FK G    A
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEA 360

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +E+++  +++ ++ PN VTY  +++G CK G  +    +  +M+K     +  T+ S I+
Sbjct: 361 EEMFQT-ILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIIN 419

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G  K G +  A  V R+MV+  I  +   Y  ++DG+ R G+ +     ++ M   G   
Sbjct: 420 GYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEE 479

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N + ++IL+  L  +G + EA S+ + +  K    D   +  L++G  K G  + A+ ++
Sbjct: 480 NNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVV 539

Query: 369 NEVEEG--------------GEGRLA--DAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            E+ E               G  RL   +  S+ +RM + G   +  T NS+MN +    
Sbjct: 540 QEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQG 599

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K ENA+ L  EM   G  P +V+YN LI GLCK     +  S + EML  G+ P  I + 
Sbjct: 600 KTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHK 659

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L+    +S+K D  L++  + +  G   +  +YN LI  LC  G  + A  + + M  +
Sbjct: 660 FLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIK 719

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               ++VTYN L+ G       +KA   ++ +L   + P+I +YN  L+GL +   M DA
Sbjct: 720 GISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDA 779

Query: 593 FEFLNDALCRGILPTTITWHILV 615
            + +++   RG++P   T++ILV
Sbjct: 780 DKLVSEMRERGLVPNATTYNILV 802



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 259/545 (47%), Gaps = 39/545 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    + A+  + +L   G+  D     T+++G  + G +  AL + ++ ++ GV+ ++
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLV---------------MET-----SVYPNVVTYN 210
           V YN L++ F K+GD  +A+ +   ++               +ET      + P VVT+ 
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I   CK    D+   ++++M  +    D  T  S ++GLC+ G +  A  + REM   
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEA 329
           G+  + V+Y  +I    ++G++ E F     M  +G  +++V    ++ GL + GK  EA
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEA 360

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE---------------- 373
             +++ + + N   +  T+  L++G CK G +  A  +L ++E+                
Sbjct: 361 EEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIING 420

Query: 374 -GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G L  A  ++ +M +     N +    L++G+ +  + E A   +KEM   G    
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN 480

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            + ++ L+N L +     EA S +K++L KG   D+  YS L++G  +      AL +  
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  +K    DV  YN L  GL   GK E    ++S M +    P+ VTYN++M+  F  G
Sbjct: 541 EMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQG 599

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             + AL++ N +    + P++++YNI + GLC    +      L++ L  G +PT I   
Sbjct: 600 KTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHK 659

Query: 613 ILVRA 617
            L++A
Sbjct: 660 FLLKA 664



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 222/490 (45%), Gaps = 45/490 (9%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N L+  F   G   + K ++  +V+   V PNV + N++++ LCK G     L      
Sbjct: 13  WNDLLYEFNASGFVSQVKVLYSEMVL-CGVVPNVFSVNLLVHSLCKVGDLGLALGYL--- 68

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  D  TY + + G CK G  +    +  EMV+ G+  D+VT N ++ G+C+ G +
Sbjct: 69  --RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLV 126

Query: 293 KEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +   + +  ++G    L+ +  N L+ G  E G V  A+ + E   +     D  T+  L
Sbjct: 127 QYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTL 186

Query: 352 INGLCKNGYLNKAIQILNEV------EEGG------------------------------ 375
           +N  CK G L KA  ++NE+      +E G                              
Sbjct: 187 VNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAY 246

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                + D  SL  +M   G   +  TC+S++ G  +  KL  A  L +EM   G  P  
Sbjct: 247 CKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNH 306

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           VSY T+I+ L K  R  EA++   +M+ +G   D++  + +++GL ++ K   A ++   
Sbjct: 307 VSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQT 366

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+    P+   Y  L+ G C  G VE A  +   M+K + +PN+VT++++++G  K G 
Sbjct: 367 ILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGM 426

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +KA+E+   +++  + P++  Y I L G     +   A  F  +    G+    I + I
Sbjct: 427 LNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDI 486

Query: 614 LVRAVMNNGA 623
           L+  +  +G 
Sbjct: 487 LLNNLKRSGG 496



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 210/456 (46%), Gaps = 32/456 (7%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N IF      L R    ++A+  +  +  KG+  DV++Y ++++G  K G+   AL+V  
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           EM E+ ++ +VV YN L  G  + G Y   K ++ R++ E  + P+ VTYN ++N     
Sbjct: 541 EMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMI-ELGLTPDCVTYNSVMNTYFIQ 598

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+ +  L++ + MK      +  TY   I GLCK G +E    V  EM+  G     + +
Sbjct: 599 GKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIH 658

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++  + R+ K     ++ + +   G  LN + YN LI  L   G   +A  +   +  
Sbjct: 659 KFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI 718

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKA---------------IQILNEVEEG--GEGRLAD 381
           K  +AD  T+  LI G C   ++ KA               I   N + EG    G + D
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  LV+ M + G   NA T N L++G  +     ++I L+ EM  KG  PT  +YN LI 
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQ 838

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ---SKKIDMALKLCCQ----- 493
              K  +  +A   + EML +G  P+  TY +LI G C+     ++D  LKL  Q     
Sbjct: 839 DYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKK 898

Query: 494 ----FLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
                 +KG  P  +    +     + GK +DA +L
Sbjct: 899 LLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRL 934



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 21/213 (9%)

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YNT++ G CK     + +  + EM++KG   D +T ++L+ G CQ   +  A  +   
Sbjct: 76  VTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGN 135

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  G   D    N L+ G C  G V  AL L  +  K    P++VTYNTL++   K GD
Sbjct: 136 LVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGD 195

Query: 554 CDKALEIWNHILEER---------------------LRPDIISYNITLKGLCSCSRMSDA 592
             KA  + N IL  R                     L+P ++++   +   C    + D 
Sbjct: 196 LAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDF 255

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           F      +  G++P  +T   ++  +  +G  T
Sbjct: 256 FSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLT 288



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 34/223 (15%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE---------KAKRFLNSLWE 128
           ++I+ Y   S  +KA + + +M  + G    I       E          A + ++ + E
Sbjct: 730 ALIRGYCTGSHVEKAFNTYSQM-LVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE 788

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +GL P+  +Y  +++G  + G+   ++ ++ EM  +G       YN+LI  + K G   +
Sbjct: 789 RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQ 848

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+E+   ++    + PN  TY+V+I G CK      C    DR+ K   + +        
Sbjct: 849 ARELLNEMLTRGRI-PNSSTYDVLICGWCKL----SCQPEMDRLLKLSYQNE-------- 895

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
                      A+++ REM E G      T   +   F   GK
Sbjct: 896 -----------AKKLLREMCEKGHVPSESTLMYISSNFSAPGK 927


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 260/508 (51%), Gaps = 19/508 (3%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P ++ +  +++ + K       +++ ++M   G+  N+  YNILI+ F ++     A  +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT + ++NG C   R  + + + D+M +     D+ T+ + IHGL 
Sbjct: 68  LGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVV 311
                  A  +   MV+ G   + VTY  +++G C+ G I   F L   M   K   +VV
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            +N +I  L +   VD+A+++++ +  K    +  T+  LI+ LC  G  + A Q+L+++
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            E                   EG+  +A  L + M K     + +T NSL+NGF    +L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +F+ M  K C P + +YNTLI G CK +R  +     +EM  +G   D +TY+ L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GL      D A K+  Q +  G  PD+  Y+IL+ GLC+ GK+E AL+++  M+K   
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             ++  Y T+++G+ K G  D   +++  +  + ++P++++YN  + GLCS   + +A+ 
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            L      G LP + T++ L+RA + +G
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 244/474 (51%), Gaps = 20/474 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G +P + +  +++NG      +  A+A+ D+M E G   +
Sbjct: 55  FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + +  LI G F       A  + +R+V +    PN+VTY V++NGLCK G  D    + 
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M+  + E D   + + I  LCK  +V+ A  +++EM   GI  + VTY+++I   C  
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  +  +L  +++ +K   N+V++N LI   ++ GK  EA  + + + +++ + D  T+
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C +  L+KA Q+                     M    C  +  T N+L+ GF
Sbjct: 294 NSLINGFCMHDRLDKAKQMF------------------EFMVSKDCFPDLDTYNTLIKGF 335

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            ++ ++E+   LF+EMS +G     V+Y TLI GL        A    K+M+  G  PD+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TYS+L++GLC + K++ AL++     +     D+ +Y  +I G+C AGKV+D   L+ +
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  +   PN+VTYNT++ GL       +A  +   + E+   PD  +YN  ++ 
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 225/452 (49%), Gaps = 22/452 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++   A   ++ + E G +PD  ++ T+I+GL        A+A+ D M +RG + N+
Sbjct: 91  CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V Y ++++G  K+GD   A  +  +  ME + +  +VV +N +I+ LCK    D+ L ++
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNK--MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      +  TY S I  LC  G    A ++  +M+E  I  + VT+NA+ID F + 
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E  +L + M ++    ++ +YN LI G   + ++D+A  ++E +  K+C  D  T+
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+                   R+ D   L   M   G   +  T  +L+ G 
Sbjct: 329 NTLIKGFCKSK------------------RVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                 +NA  +FK+M   G  P +++Y+ L++GLC   +  +A      M +   K D+
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +I G+C++ K+D    L C    KG  P+V  YN +I GLCS   +++A  L   
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           MK+   +P+  TYNTL+    + GD   + E+
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 35/489 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN     K    A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 80  IVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLF---LHNKASEAV 135

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            L++  +Q+   P  V   V+     K    D A ++  +M          IF      L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  + A      +  KG++P+V +Y ++I+ L   G    A  +  +M E+ +  N+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LID F K+G ++ A+++ + ++ + S+ P++ TYN +ING C   R D+  +M++
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M   +   D  TY + I G CK+  VE    ++REM   G+  D VTY  +I G    G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 ++++ M   G   ++++Y+IL+ GL  NGK+++A+ +++ +++     D   + 
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I G+CK                   G++ D   L   +   G K N  T N++++G  
Sbjct: 435 TMIEGMCK------------------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L+ A  L K+M   G  P   +YNTLI    +      +   ++EM    +  D  
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536

Query: 470 TYSLLINGL 478
           T  L+ N L
Sbjct: 537 TIGLVANML 545


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/608 (27%), Positives = 293/608 (48%), Gaps = 37/608 (6%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
           P  AL  F     +P +  S  +F  IL  L+   L+     ++E +   + +   DV +
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLI 158

Query: 78  S-------VIQAYGKNSM-PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +       V     +N + PD      +  N I      +L  +    KAK     + + 
Sbjct: 159 AGHVXCLLVFDKMIRNGLLPD-----VKNCNRILR----VLRDENLLSKAKNVYGMMEQF 209

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+KP V +Y T+++   K G +  AL +  EM ERG   N V YN+L++G  KKG+  +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K + E + + + +  +  TYN +ING C+ G F E  ++ + M          TY + ++
Sbjct: 270 KGLIEEM-LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
           GLCK   V G    + +M++S    D V++N+++ G+CR G I E F L+ E+  R    
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            V++YN LI GL   G +D A+ + + + ++    D  T+ +L+NG  K GY++ A    
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           NE                  M   G K + +  N+ + G ++ +    A  + +EM   G
Sbjct: 449 NE------------------MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P V++YN  ++ LC+   F EA   ++ M+  G  PD +TY+ +ING  ++  +  A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           ++  + L KG  P V  Y +LIH   +   ++ A   +S M +++   N++TYN +++GL
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             T   D+A + ++ + E+ + P+  SY I +   C+     +A     + L R I P +
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 609 ITWHILVR 616
            T  + ++
Sbjct: 671 FTHSVFLK 678



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 242/501 (48%), Gaps = 20/501 (3%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + +   GL PDV +   ++  L     L  A  V+  M + G++  VV YN ++D + K
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           +G   +A E+   +  E   YPN VTYNV++NGL K G  ++   + + M  +     ++
Sbjct: 228 EGRVDQALELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEV 301
           TY   I+G C+ G    A  +  EMV    F    TYN ++ G C+  ++        ++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           +  K   ++VS+N L+ G    G + EA  +++ L+ ++      T+  LI+GLC  GYL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           + A+++  E                  M   G   + +T   L+NG  +   +  A   F
Sbjct: 407 DAALRLKKE------------------MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM  KG  P   +YNT I G  K+     A+S  +EML  G+ PD+ITY++ ++ LCQ 
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
              + A  L    +  G  PD   Y  +I+G    G +  A ++++ M  +   P++VTY
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+         D A   ++ +LE+ +  ++I+YN  + GLC   RM +A+++ ++   
Sbjct: 569 TVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628

Query: 602 RGILPTTITWHILVRAVMNNG 622
           +GILP   ++ IL+    N G
Sbjct: 629 KGILPNKFSYTILINESCNMG 649



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 35/236 (14%)

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + +F +M R G  P V + N ++  L       +A +    M + G KP ++TY+ +++ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE----------------- 520
            C+  ++D AL+L  +  ++G  P+   YN+L++GL   G++E                 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 521 ------------------DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
                             +A  L   M  R   P L TYNTLM GL K          ++
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +L+ +  PDI+S+N  L G C    +S+AF   ++  CR ++PT IT++ L+  +
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 46/256 (17%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
            F+ +L + + P    + +RI+  ++I        VA S+ +       P   +      
Sbjct: 447 FFNEMLSKGLKPDRFAYNTRIVGEMKIADT----SVAFSMQEEMLAAGFPPDVI------ 496

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
              +      LC++  FE+A   L ++   GL PD  +Y ++ING VK+G L  A  VF+
Sbjct: 497 --TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 160 EMFERGVETNVVCYNILIDGFFKKG----DYMRAKEIWERLVM----------------- 198
           EM  +GV  +VV Y +LI     K      +M   ++ E+ V                  
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 199 -------------ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
                        E  + PN  +Y ++IN  C  G ++E L ++  M   + + DSFT+ 
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS 674

Query: 246 SFIHGLCKAGNVEGAE 261
            F+  L +   V   +
Sbjct: 675 VFLKNLHRDYQVHAVQ 690


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 250/519 (48%), Gaps = 45/519 (8%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F++A  FL+ +      P+V +Y T+++G +K   L     + + M   G   N   +N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING-------------------- 215
           L+  +  + DY  A ++  R+       P  V YN+ I                      
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMT-TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 176

Query: 216 ---------------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                                LC  G+FD+  ++   M +     D+ TY   I  LC A
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             VE A  +++EM   G+  D  TY  +ID FC+AG I++   L+E M   GC   VV+Y
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI   L+  +V +A  I+  + +  C  +  T+G L++GLCK G ++KA ++  ++  
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI- 355

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G    AD+       D+H    N  T  +L++G  +A K+++A  L   M   GC P  
Sbjct: 356 -GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           + Y+ LI+G CK  +   A     +M + G+ P + TY+ LI+ + +  ++D+A+K+  Q
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 474

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+   TP+V  Y  +I GLC  G+ E AL+L S M+++ C PN+VTY  L+DGL K G 
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            D +L+++  +  +   P+ ++Y + +  LC+   +  A
Sbjct: 535 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 573



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 177/662 (26%), Positives = 300/662 (45%), Gaps = 85/662 (12%)

Query: 6   KRLLNLLKAEK-NPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           KR++N++  E  NP+ +L  +L  S   E  YA++  L + +      P  VV+   I  
Sbjct: 97  KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 156

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMP----------------------DKALDVFQRM- 99
           +   +K   P+ + L+  + YG+                          DKA  + + M 
Sbjct: 157 ICGQEKLPSPDLLDLAE-KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 215

Query: 100 -------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
                     +      LC   + EKA      +   G+ PDVY+Y  +I+   K+G + 
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +F+EM   G    VV Y  LI  + K     +A +I+ R+V +    PN VTY  +
Sbjct: 276 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGAL 334

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDS----------------FTYCSFIHGLCKAGN 256
           ++GLCK G   +  E++ ++       DS                 TY + + GLCKA  
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           V+ A  +   M+ SG   + + Y+A+IDGFC+AGKI    E++  M + G L +V +Y  
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 454

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI  + ++G++D A+ +   + + +C  +  T+  +I+GLC+ G   KA+++L+ +EE  
Sbjct: 455 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE-- 512

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                            GC  N  T  +L++G  +A K++ ++ LF +MSRKGCSP  V+
Sbjct: 513 ----------------KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LIN LC      +A   + EM +  W   +  Y   I G   SK    +L +  +  
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEME 614

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV-----TYNTLMDGLFK 550
             G  P   +Y +LI     AG++E A++L+  M +   VP+ V      Y +L+  L  
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCL 671

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               ++A  +++ +      P++  +   +KGL    +  +A +     LC GI    + 
Sbjct: 672 ASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ-----LCYGICHEGVN 726

Query: 611 WH 612
           W 
Sbjct: 727 WQ 728



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 219/521 (42%), Gaps = 47/521 (9%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDY 186
           E G   D ++ G   + L K G    AL    +M ER   + + V    +I G  +   +
Sbjct: 3   ESGFCMDRFTVGCFAHALCKEGRWADAL----DMIEREDFKLDTVLCTHMISGLMEASYF 58

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A     R+   + + PNVVTY  +++G  K  +   C  + + M       +   + S
Sbjct: 59  DEAMSFLHRMRCNSCI-PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK--ECFELWE---- 300
            +H  C   +   A ++   M   G     V YN  I   C   K+   +  +L E    
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 301 -VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            ++     LN V+     R L   GK D+A  + + +  K    D++T+  +I  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            + KA  +  E                  M   G   + YT   L++ F +A  +E A +
Sbjct: 238 KVEKAFLLFQE------------------MKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 279

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+EM   GCSPTVV+Y  LI+   K ++  +A      M++ G +P+ +TY  L++GLC
Sbjct: 280 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 339

Query: 480 QSKKIDMALKLCCQFL----------------QKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           ++  I  A ++  + +                +    P+V  Y  L+ GLC A KV+ A 
Sbjct: 340 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 399

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M    C PN + Y+ L+DG  K G  D A E++  + +    P + +Y   +  +
Sbjct: 400 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 459

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
               R+  A + L+  L     P  +T+  ++  +   G S
Sbjct: 460 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 500



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 150/365 (41%), Gaps = 32/365 (8%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M ESG  +D  T        C+ G+  +  ++ E    K  L+ V    +I GL+E    
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFK--LDTVLCTHMISGLMEASYF 58

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           DEA+S    +R  +C  +  T+  L++G  K   L    +I                  +
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI------------------I 100

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           N M   GC  N    NSL++ +        A  L   M+  GC P  V YN  I  +C  
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 160

Query: 447 ERFGE------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           E+         A     EML      + +  +     LC   K D A +L  + ++KGF 
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD + Y+ +I  LC A KVE A  L+  MK     P++ TY  L+D   K G  ++A  +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRM---SDAFEFLNDALCRGILPTTITWHILVRA 617
           +  +      P +++Y   +       ++   +D F  + DA CR   P  +T+  LV  
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR---PNDVTYGALVDG 337

Query: 618 VMNNG 622
           +   G
Sbjct: 338 LCKAG 342


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/645 (26%), Positives = 309/645 (47%), Gaps = 31/645 (4%)

Query: 2    VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            V++   L+++L   ++   A A FD   R+ G   + H ++ ++  L+    +    ++L
Sbjct: 367  VVTFTILVDVLCKARDFDEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425

Query: 62   ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRK 113
            + +E           ++ I  +GK+    KA++ F++M        I  C A +  L   
Sbjct: 426  DTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             +  +AK   N L E GL PD  +Y  ++    K G +  A+ +  EM   G E +V+  
Sbjct: 486  GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            N LID  +K G    A ++++R+  +  + P VVTYN +++GL K GR  + +E+++ M 
Sbjct: 546  NSLIDSLYKAGRVDEAWQMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
              +   ++ ++ + +   CK   VE A +++ +M       D +TYN +I G  +  K+ 
Sbjct: 605  XKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664

Query: 294  ECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLI 352
              F  +  + +    + V+   L+ GL++ G++ +AISI  + + +     + +    L+
Sbjct: 665  HAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 353  NGLCKNGYLNKAIQILNEVEEGGEGRLADA--ASLVNRMDKHGCKLNAY----------- 399
             G      ++KAI    E+   G  R  D+    LV  + KH  +L AY           
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICR-EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 400  ------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                  + N L+   ++    E A  LFK+M   GC+P   ++N L+    K  +  E +
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 454  SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               KEM+ +  KPD ITY+++I+ L +S  +D AL      +   F P    Y  LI GL
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 514  CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
               G++E+A++L+  M    C PN   +N L++G  K GD + A +++  ++ E +RPD+
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 574  ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             SY I +  LC   R+ +A  + N+    G+ P  I ++ ++  +
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 292/618 (47%), Gaps = 47/618 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S   +L +LK+  +P  AL+ F S +  P   H+    + +L  L          R+ +
Sbjct: 87  VSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFL----------RVHD 136

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
            +E           ++ +  + +  +  + LD +  + +      G+    RQ       
Sbjct: 137 KVE----------DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL----RQMTTV--- 179

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           LN + + G   + YSY  +I+ L++SG    AL V+  M   G++ ++  Y+ L+    K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           K D      + + +  +  + PNV T+ + I  L + G+ DE  E++ RM       D  
Sbjct: 240 KRDSEMVMVLLKEM-EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I  LC AG +E A+ ++ +M  +G   D V Y  ++D F   G +    E W  M
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G + +VV++ IL+  L +    DEA + ++++R++    +  T+  LI GL +    
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR---- 414

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          GR+ DA  L++ M+  G +  AYT  + ++ F ++ +   A+  F
Sbjct: 415 --------------AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           ++M  KG  P +V+ N  +  L ++ R  EA +    + E G  PD +TY++++    + 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++D A+ L  + ++ G  PDV + N LI  L  AG+V++A Q++  MK     P +VTY
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL K G   KA+E++  ++ ++  P+ IS+N  L   C    +  A +  +    
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 602 RGILPTTITWHILVRAVM 619
               P  +T++ ++  ++
Sbjct: 641 MDCKPDVLTYNTVIYGLI 658



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 269/558 (48%), Gaps = 58/558 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC+ R F++A    + + ++G+ P++++Y T+I GL+++G +  AL + D M 
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             GV+     Y   ID F K G+  +A E +E++  +  + PN+V  N  +  L + GR 
Sbjct: 430 SVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK-GIVPNIVACNASLYSLAEMGRL 488

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E   M++ +++N    DS TY   +    K G V+ A  +  EM+ +G   D +  N++
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 283 IDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ID   +AG++ E +++++ M   K    VV+YN L+ GL + G+V +AI ++E +  K C
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKC 608

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           + ++ +   L++  CKN          +EVE         A  + ++M    CK +  T 
Sbjct: 609 SPNTISFNTLLDCFCKN----------DEVEL--------ALKMFSKMTVMDCKPDVLTY 650

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML- 460
           N+++ G I+ +K+ +A + F ++ +K   P  V+  TL+ GL K  + G+A S  ++ + 
Sbjct: 651 NTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 461 -------EKGW--------------KPDMITYSLLING--------------LCQSKKID 485
                     W              K  +    L++NG              LC+ K+  
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 486 MALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A ++  +F +K G +P +  YN LI  L      E A  L+ +MK   C P+  T+N L
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +    K+G   +  E++  ++  R +PD I+YNI +  L   + +  A +F  D +    
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 605 LPTTITWHILVRAVMNNG 622
            PT  T+  L+  +   G
Sbjct: 890 RPTPRTYGPLIDGLAKVG 907



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 273/601 (45%), Gaps = 70/601 (11%)

Query: 63   LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCR 112
            L E+ +  C  DV +  S+I +  K    D+A  +F RM ++        +      L +
Sbjct: 530  LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 113  KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            + + +KA     S+  K   P+  S+ T+++   K+ ++  AL +F +M     + +V+ 
Sbjct: 590  EGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649

Query: 173  YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM---- 228
            YN +I G  K+     A   W    ++ S++P+ VT   ++ GL KCG+  + + +    
Sbjct: 650  YNTVIYGLIKENKVNHA--FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 229  ------------WDRMK-----KNEREK----------------DSFTYCSFIHGLCKAG 255
                        W+ +      + E +K                DSF     +  LCK  
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL-IPLVRVLCKHK 766

Query: 256  NVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
                A +++ +  +  GI     +YN +I         ++ ++L++ M   GC  +  ++
Sbjct: 767  RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826

Query: 314  NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            N+L+    ++GK+ E   +++ +  + C  D+ T+ ++I+ L K+  L+KA+    ++  
Sbjct: 827  NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886

Query: 374  GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                                 +    T   L++G  +  +LE A+ LF+EMS  GC P  
Sbjct: 887  SD------------------FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 434  VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
              +N LING  K+     A    K M+ +G +PD+ +Y++L++ LC + ++D AL    +
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 494  FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                G  PD   YN +I+GL  + ++E+AL LY+ M+ R  VP+L TYN+LM  L   G 
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 554  CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             ++A  ++  +    L PD+ +YN  ++G         A+    + +  G  P   T+  
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQ 1108

Query: 614  L 614
            L
Sbjct: 1109 L 1109



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 21/370 (5%)

Query: 109  ILCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +LC+ ++   A +  +   +K G+ P + SY  +I  L++      A  +F +M   G  
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             +   +N+L+    K G      E+++ ++      P+ +TYN++I+ L K    D+ L+
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
             +  +  ++      TY   I GL K G +E A R++ EM + G   +   +N +I+G+ 
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            + G  +   +L++ M  +G   ++ SY IL+  L   G+VDEA+  +  L+    + D  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             +  +INGL                  G   R+ +A +L N M   G   + YT NSLM 
Sbjct: 1000 AYNRIINGL------------------GKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
                A  +E A  +++E+   G  P V +YN LI G    E    AY+  K M+  G  P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101

Query: 467  DMITYSLLIN 476
            ++ TY+ L N
Sbjct: 1102 NIGTYAQLPN 1111



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N ++  L  + KV++  +++E +++K    D  T+  +   L   G L +   +LN    
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN---- 181

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                         +M K G  LNAY+ N L++  IQ+     A+ +++ M  +G  P++
Sbjct: 182 --------------KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSL 227

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +Y+ L+  L K          +KEM + G +P++ T+++ I  L ++ KID A ++  +
Sbjct: 228 KTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRR 287

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              +G  PD+  Y +LI  LC+AG++E+A +L+  MK     P+ V Y TL+D     GD
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D   E W+ +  +   PD++++ I +  LC      +AF   +    +GILP   T++ 
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407

Query: 614 LVRAVMNNG 622
           L+  ++  G
Sbjct: 408 LICGLLRAG 416


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 245/512 (47%), Gaps = 50/512 (9%)

Query: 154 ALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           AL + D++  R GV+ +   YN+++    +   +  A  ++ R+V    V P   T+ V 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
              LC+ GR DE L +   M ++    D+  Y + IH LC  G V  A  +  EM+  G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC------------------------- 307
             D  T++ ++ G C  G+++E   L + M  KGC                         
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 308 -------LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
                  LNVV +N +I G L  GK+ EA  ++E +  K C  D+ T+ +L++GLCK G 
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  A+++L E+E+ G                  G   D  +L+  M   G  LN+   N 
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++    +  +++ A+ L +EM  +GC+P + SYNT+I  LC  E+  EA    + +LE+G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              + ITY+ +I+ L +  +   A++L  + +  G + DV  YN LI  +C  G V+ +L
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M ++   PN V+YN L+  L K      ALE+   +L + L PDI++YN  + GL
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C    M  A   L       + P  IT++IL+
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 170/594 (28%), Positives = 275/594 (46%), Gaps = 66/594 (11%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-SRILELIEIQKCYCP 72
           A  +P  AL+L DS    PG+          L R + P   +H+  ++     +Q  +  
Sbjct: 84  AGGDPDRALSLLDSL--PPGFLPLRESLLLPLLRSLPPGRALHLLDQLPRRFGVQPSFRS 141

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFL 123
            +V LSV+    +      AL +++RM            FG  A  LCR  + ++A   L
Sbjct: 142 YNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALL 198

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             +   G  PD   Y TVI+ L   G +  A  + +EM   G   +V  ++ ++ G    
Sbjct: 199 RGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGL 258

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC------------------------ 219
           G    A  + +R+ M     P V+TY  ++ GLC+                         
Sbjct: 259 GRVREAARLVDRM-MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV 317

Query: 220 -------GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
                  G+  E  E+++ M     + D+ TY   +HGLCK G +  A R+ REM + G 
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF 377

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAIS 331
             + VTY  ++  FC+ G   +   L E M  KG  LN   YN +I  L ++G++DEA+ 
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 437

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + + +R + CN D  ++  +I  LC N  + +A  +   + E  EG +A           
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE--EGVVA----------- 484

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T N++++  ++  + ++A+ L KEM   GCS  VVSYN LI  +CK      
Sbjct: 485 -----NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +   ++EM EKG KP+ ++Y++LI+ LC+ +++  AL+L  Q L +G  PD+  YN LI+
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           GLC  G +  AL L   +   N  P+++TYN L+    K    D A  + N  +
Sbjct: 600 GLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 235/485 (48%), Gaps = 50/485 (10%)

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCS 246
           RA  + ++L     V P+  +YNV+++ L +     + L ++ RM   +R    +FT+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
               LC+ G  + A  + R M   G   DAV Y  +I   C  G + E   L   M   G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  +V +++ ++RG+   G+V EA  + + +  K C     T+G L+ GLC+    ++A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 366 QILNEVEE----------GG---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            +L  V E          GG   EG+LA+A  L   M   GC+ +A+T + LM+G  +  
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 413 KLENAIFLFKEMSRKGCSPTVVS-----------------------------------YN 437
           ++ +A+ L +EM +KG +P VV+                                   YN
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I  LCK  R  EA   ++EM  +G  PD+ +Y+ +I  LC +++++ A  +    L++
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   +   YN +IH L   G+ +DA++L   M    C  ++V+YN L+  + K G+ D++
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + E+ ++P+ +SYNI +  LC   R+ DA E     L +G+ P  +T++ L+  
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 618 VMNNG 622
           +   G
Sbjct: 601 LCKMG 605


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 267/542 (49%), Gaps = 55/542 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + E+AK  L       + P+  +Y  +++   ++G++ GA  V  +M E+ V  N
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ +I+G  K+G   +A + + R + ++ + PNVVTY  +I+G  K    +  L+++
Sbjct: 432 VVTFSSIINGLVKRGCLGKAAD-YMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     E ++F   S ++GL K GN+EGAE ++++M E G+ +D V Y  ++DG  + 
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F++  E+M +    + V YN+ I  L   GK  EA S  + +R      D  T+
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I   C+ G  +KA+++L E                  M ++  K N  T  +L+ G 
Sbjct: 611 NTMIAARCREGKTSKALKLLKE------------------MKRNSIKPNLITYTTLVVGL 652

Query: 409 IQASKLENAIFLFKEMSRKGCSPT-----------------------------------V 433
           ++A  ++ A FL  EM+  G +PT                                   +
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             YNTL++ LC       A   + EML +G  PD IT++ LI G C+S  +D A  +  Q
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQ 772

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G +P++  +N L+ GL SAG++ +A  + S+MKK    PN +TY+ L+ G  K  +
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL ++  ++ +   P   +YN  +        M+ A E  ++   RG+L T+ T+ I
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892

Query: 614 LV 615
           L+
Sbjct: 893 LL 894



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 251/502 (50%), Gaps = 19/502 (3%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           DV  +  +I+G  K  D+  ALAV + M  +GV  +VV YN L+ GFF  GD   A E+ 
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           ER+  +  V PNVVTY  +I   CK    DE   +++ M ++    D  T  + + GLC+
Sbjct: 246 ERMKAD-GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCR 304

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVS 312
            G    A  ++REM + G+  + VTY  +ID   +A +  E   L  E++ R   +++V 
Sbjct: 305 DGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVM 364

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y  L+  L + GK++EA  +    +  N   +  T+ VL++  C+ G ++ A Q+L ++E
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           E                    G L  AA  + +M   G   N  T  +L++GF +    E
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ ++++M  +G        ++L+NGL K      A +  K+M E+G   D + Y+ L+
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +GL ++  +  A K+  + ++K  +PD  +YN+ I+ LC+ GK  +A      M+     
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+  TYNT++    + G   KAL++   +    ++P++I+Y   + GL     +  A   
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 596 LNDALCRGILPTTITWHILVRA 617
           LN+    G  PT++T   +++A
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQA 686



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 251/558 (44%), Gaps = 54/558 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ +    A   +  +  +G+  DV  Y +++ G   SGD   AL V + M   GVE NV
Sbjct: 198 CKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNV 257

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI  + K      A  ++E +V  + V P+VVT + +++GLC+ G+F E   ++ 
Sbjct: 258 VTYTALIGEYCKGKGMDEAFSLYEGMV-RSGVLPDVVTLSALVDGLCRDGQFSEAYALFR 316

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K     +  TYC+ I  L KA     +  +  EMV  G+ +D V Y A++D   + G
Sbjct: 317 EMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEG 376

Query: 291 KIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           KI+E  + L          N V+Y +L+      G +D A  +   + EK+   +  T  
Sbjct: 377 KIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFS 436

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            +INGL K G L KA   + ++++ G        G L D          A  +   M   
Sbjct: 437 SIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHE 496

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + N +  +SL+NG  +   +E A  LFK+M  +G     V+Y TL++GL K      A
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           +   +E++EK   PD + Y++ IN LC   K   A     +    G  PD   YN +I  
Sbjct: 557 FKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA 616

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA--------------- 557
            C  GK   AL+L   MK+ +  PNL+TY TL+ GL + G   KA               
Sbjct: 617 RCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPT 676

Query: 558 --------------------LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
                               LEI   ++   L  DI  YN  +  LC      +A   L+
Sbjct: 677 SLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLD 736

Query: 598 DALCRGILPTTITWHILV 615
           + L RGI P TIT++ L+
Sbjct: 737 EMLTRGIAPDTITFNALI 754



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 258/524 (49%), Gaps = 19/524 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  QF +A      + + G+ P+  +Y T+I+ L K+     +L +  EM  RGV  +
Sbjct: 302 LCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMD 361

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  L+D   K+G    AK++  R     ++ PN VTY V+++  C+ G  D   ++ 
Sbjct: 362 LVMYTALMDRLGKEGKIEEAKDVL-RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++     +  T+ S I+GL K G +  A    R+M +SGI  + VTY  +IDGF + 
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +   +++  M  +G   N    + L+ GL +NG ++ A ++++ + E+    D   +
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             L++GL K G +  A ++  E+ E                    G+ ++A S +  M  
Sbjct: 541 TTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN 600

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  T N+++    +  K   A+ L KEM R    P +++Y TL+ GL +     +
Sbjct: 601 TGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKK 660

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + EM   G+ P  +T+  ++     S++ D+ L++    +  G   D+T+YN L+H
Sbjct: 661 AKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVH 720

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G   +A  +   M  R   P+ +T+N L+ G  K+   D A  I+  +L + L P
Sbjct: 721 VLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSP 780

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +I ++N  L GL S  R+ +A   L+D    G+ P  +T+ ILV
Sbjct: 781 NIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 256/511 (50%), Gaps = 24/511 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN---VVCYNI 175
           A   L+ + ++G+  D  +  T + GL ++G L+G  A   EM  RG   +   VV +N 
Sbjct: 134 APPVLSEMCKRGVSWDGVTVSTALVGLCRTG-LVGEAAALAEMLVRGRGIDGLDVVGWNA 192

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LIDG+ K  D   A  + ER+  +  V  +VV YN ++ G    G  D  LE+ +RMK +
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQ-GVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E +  TY + I   CK   ++ A  +Y  MV SG+  D VT +A++DG CR G+  E 
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           + L+  M + G   N V+Y  LI  L +  +  E++ +   +  +    D   +  L++ 
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L                  G EG++ +A  ++          N  T   L++   +A  +
Sbjct: 372 L------------------GKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  +  +M  K   P VV+++++INGL K    G+A  ++++M + G  P+++TY  L
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G  + +  + AL +    L +G   +  + + L++GL   G +E A  L+ +M +R  
Sbjct: 474 IDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           + + V Y TLMDGLFKTG+   A ++   ++E+ L PD + YN+ +  LC+  + S+A  
Sbjct: 534 LLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKS 593

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNGAST 625
           FL +    G+ P   T++ ++ A    G ++
Sbjct: 594 FLKEMRNTGLEPDQATYNTMIAARCREGKTS 624



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 239/491 (48%), Gaps = 29/491 (5%)

Query: 67  QKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
           +K   P  V  S +I    K     KA D  ++M +         +G       + +  E
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            A      +  +G++ + +   +++NGL K+G++ GA A+F +M ERG+  + V Y  L+
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DG FK G+   A ++ + L ME ++ P+ V YNV IN LC  G+F E       M+    
Sbjct: 545 DGLFKTGNMPAAFKVGQEL-MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E D  TY + I   C+ G    A ++ +EM  + I  + +TY  ++ G   AG +K+   
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663

Query: 298 LWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L   M   G     +++  +++    + + D  + I EL+     +AD T +  L++ LC
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            +G    A  +L+E                  M   G   +  T N+L+ G  ++S L+N
Sbjct: 724 CHGMARNATVVLDE------------------MLTRGIAPDTITFNALILGHCKSSHLDN 765

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  ++ +M  +G SP + ++NTL+ GL    R GEA + + +M + G +P+ +TY +L+ 
Sbjct: 766 AFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVT 825

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G  +      AL+L C+ + KGF P  + YN L+     AG +  A +L+S MK+R  + 
Sbjct: 826 GYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLH 885

Query: 537 NLVTYNTLMDG 547
              TY+ L++G
Sbjct: 886 TSSTYDILLNG 896



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 25/373 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +F +AK FL  +   GL+PD  +Y T+I    + G    AL +  EM    ++ N
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ Y  L+ G  + G   +AK +   +       P  +T+  ++       R D  LE+ 
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMA-SAGFAPTSLTHQRVLQACSGSRRPDVILEIH 700

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       D   Y + +H LC  G    A  V  EM+  GI  D +T+NA+I G C++
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +   F ++  M  +G   N+ ++N L+ GL   G++ EA ++   +++     ++ T+
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +L+ G  K     +A+++  E+   G                  G +  A  L + M +
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAI---FLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
            G    + T + L+NG+   SKL N I    L K+M   G  P+  + +++     +   
Sbjct: 881 RGVLHTSSTYDILLNGW---SKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGM 937

Query: 449 FGEAYSFVKEMLE 461
            GEA   +K + +
Sbjct: 938 TGEARRLLKTLFK 950


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 264/513 (51%), Gaps = 28/513 (5%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N + GC    L R+   E A+     +  KGL+PD+ +Y ++I+G  K G L GA++VF+
Sbjct: 255 NMVIGC----LAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFE 310

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLC 217
           EM + G E +V+ YN LI+ F K   + R  + +E L  + +  + PNVVTY+ +I+  C
Sbjct: 311 EMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC 367

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           K G   E  + +  M +   + + FTY S I   CK G++  A ++  EM ++G+ ++ V
Sbjct: 368 KAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV 427

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELL 336
           TY A++DG C  G+++E  EL+  + + G  LN   Y  L  G ++   +++A+ I E +
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
            +KN   D   +G  I GLC+           NE+E        D+ +++  M   G   
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQ----------NEIE--------DSMAVIREMMDCGLTA 529

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           N+Y   +L++ + +  K   A+ L +EM   G   TVV+Y  LI+GLCK+    +A  + 
Sbjct: 530 NSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYF 589

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
             M   G +P+++ Y+ LI+GLC++  ++ A  L  + L KG +PD  +Y  LI G    
Sbjct: 590 DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKH 649

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G   +AL L + M +     +L  Y +L+ G  + G    A  + + +L + + PD +  
Sbjct: 650 GNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLC 709

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
              L+       +++A    +D   RG++  TI
Sbjct: 710 ICLLRKYYELGDINEALALHDDMARRGLISGTI 742



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 171/636 (26%), Positives = 305/636 (47%), Gaps = 52/636 (8%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPH---LFHHIL---RRLIDPKLVVHVSRIL--- 61
           L+K + +P +AL  F  A    G+ H+     +  HIL      +D + V+    +L   
Sbjct: 101 LVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGRE 160

Query: 62  -------ELIEIQKCYCPE-----DVALSVIQAYGKNSMPDKALDVFQRMNE------IF 103
                  +++   +  C       D   +V+   G   M ++A   F +MN+      + 
Sbjct: 161 FPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLG---MLEEARQCFWKMNKFRVLPKVR 217

Query: 104 GCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
            C   +  L +  +   A  F   +   GL P V++Y  VI  L + GDL  A ++F+EM
Sbjct: 218 SCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM 277

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             +G+  ++V YN LIDG+ K G    A  ++E +  +    P+V+TYN +IN  CK  R
Sbjct: 278 KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM-KDAGCEPDVITYNSLINCFCKFER 336

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             +  E    MK+   + +  TY + I   CKAG +  A + + +M+  G+  +  TY +
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +ID  C+ G + E F+L   M + G  LN+V+Y  L+ GL E+G++ EA  ++  L +  
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              +   +  L +G  K   + KA+ IL E                  M+K   K +   
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEE------------------MNKKNLKPDLLL 498

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             + + G  + +++E+++ + +EM   G +     Y TLI+   KV +  EA + ++EM 
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G K  ++TY +LI+GLC+   +  A++      + G  P++ +Y  LI GLC    +E
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A  L++ M  +   P+ + Y +L+DG  K G+  +AL + N ++E  +  D+ +Y   +
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            G     ++  A   L++ L +GI+P  +    L+R
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR 714



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 229/472 (48%), Gaps = 30/472 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           S+I  YGK  M   A+ VF+ M +  GCE  ++         C+  +  +A  +L+ + +
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMKDA-GCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ 349

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +GL+P+V +Y T+I+   K+G LL A   F +M   G++ N   Y  LID   K GD   
Sbjct: 350 RGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNE 409

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++ E  + +  V  N+VTY  +++GLC+ GR  E  E++  + K     +   Y S  
Sbjct: 410 AFKL-ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLF 468

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGC 307
           HG  KA  +E A  +  EM +  +  D + Y   I G CR  +I++    + E+M     
Sbjct: 469 HGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLT 528

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N   Y  LI    + GK  EA+++ + +++        T+GVLI+GLCK G + +A++ 
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRY 588

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                              + M ++G + N     +L++G  +   LE A  LF EM  K
Sbjct: 589 F------------------DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK 630

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G SP  + Y +LI+G  K    GEA S    M+E G + D+  Y+ LI G  +  ++ +A
Sbjct: 631 GISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLA 690

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
             L  + L+KG  PD  +   L+      G + +AL L+ +M +R  +   +
Sbjct: 691 KSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 216/492 (43%), Gaps = 47/492 (9%)

Query: 141 VINGLVK-SGDLLGALAVFDEM-----FERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V   LVK  GD   AL  F E      F    E+  V  +IL  G F    Y+ A+ + +
Sbjct: 97  VSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMF----YLDARSVIK 152

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
             ++    +P              C  FD    +W    +N        + +  + L   
Sbjct: 153 EWILLGREFPG-------------CDFFDM---LWS--TRNVCRPGFGVFDTLFNVLVDL 194

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
           G +E A + + +M +  +     + N ++    ++ K       ++ M   G   +V +Y
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N++I  L   G ++ A S++E ++ K    D  T+  LI+G  K G L  A+ +  E+++
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G                  C+ +  T NSL+N F +  ++  A      M ++G  P V
Sbjct: 315 AG------------------CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y+TLI+  CK     EA  F  +M+  G +P+  TY+ LI+  C+   ++ A KL  +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             Q G   ++  Y  L+ GLC  G++ +A +L+  + K     N   Y +L  G  K   
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +KA++I   + ++ L+PD++ Y   + GLC  + + D+   + + +  G+   +  +  
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 614 LVRAVMNNGAST 625
           L+ A    G +T
Sbjct: 537 LIDAYFKVGKTT 548



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 29/304 (9%)

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           + +  S+   Y K  M +KA+D+ + MN                           +K LK
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMN---------------------------KKNLK 493

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD+  YGT I GL +  ++  ++AV  EM + G+  N   Y  LID +FK G    A  +
Sbjct: 494 PDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNL 553

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            + +  +  +   VVTY V+I+GLCK G   + +  +D M +N  + +   Y + I GLC
Sbjct: 554 LQEM-QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K   +E A+ ++ EM++ GI  D + Y ++IDG  + G   E   L   M   G  L++ 
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G+V  A S+ + +  K    D      L+    + G +N+A+ + +++
Sbjct: 673 AYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDM 732

Query: 372 EEGG 375
              G
Sbjct: 733 ARRG 736


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 177/628 (28%), Positives = 300/628 (47%), Gaps = 48/628 (7%)

Query: 12  LKAEKNPHTALALFDSATREPGY---AHSPHLFHHILR-------------RLIDPKLVV 55
           LK+  NP TAL  F   +    +   A S  +  H+L              RLID K+  
Sbjct: 94  LKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPA 153

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQ 115
             +R  E    +      D  L V +      + D  + V+    +  G           
Sbjct: 154 FYARNFESRHFEIAQIMADFNL-VFEPVIGVKIADLLVHVYSTQFKHLG----------- 201

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F  A    + L +KGL P + +   +++ LVK+ +L  +  V+D +   G+  +V  ++ 
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I+ F K      A  ++ ++  +  V PNVVTYN +I+GLCK GR DE     ++M K 
Sbjct: 262 MINAFCKGHREDDAIGLFSKM-EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE 320

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           +      TY  FI+GL K   ++ A  V +EM E G   + V YN +IDG+C+ G I E 
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEA 380

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++ + M  KG   N V+ N LI+G  ++ ++ +A ++ E +  +    +  +  ++IN 
Sbjct: 381 LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC                   + R   A   +  M     + N     +L++G  +A K 
Sbjct: 441 LCL------------------KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ 482

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A+ L+  +  KG  P +V+ N LI+GLCK     E    +++MLE+G   D ITY+ L
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G C+  K+    +L  + ++KG  PD+  +N+L+HGLC+A K+++A +L+   KK   
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGY 602

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           VPN+ TY  ++DG  K    ++   + N ++ ++L  + + YN  ++  C    M+ AF 
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFR 662

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
             +D   RG+L +  T+  L+  + N G
Sbjct: 663 LRDDMKSRGVLLSCATYSSLMHGLCNIG 690



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 268/566 (47%), Gaps = 54/566 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + +K+    + +   G+ PDV+ + T+IN   K      A+ +F +M + GV  N
Sbjct: 231 LVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPN 290

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +I G  K G    A    E++V E  V P+++TY+V INGL K  + DE   + 
Sbjct: 291 VVTYNNIIHGLCKSGRLDEAYRFKEKMVKE-KVSPSLITYSVFINGLIKLEKIDEANCVL 349

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     +   Y + I G CK GN+  A ++  +M+  GI  ++VT N++I GFC++
Sbjct: 350 KEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKS 409

Query: 290 GKIKECFE-LWEVMGRKGCLNVVSYNI--------------------------------- 315
            +I +    L E++GR   +N  S+++                                 
Sbjct: 410 DQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLL 469

Query: 316 --LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L+ GL + GK  EA+ +W  L  K    +  T   LI+GLCK G + + +++L ++ E
Sbjct: 470 TTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLE 529

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 EG++ +   L   M K G + + YT N L++G   A K++ 
Sbjct: 530 RGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L+ E  + G  P V +Y  +I+G CK  +  E  + + E++ K  + + + Y+ LI 
Sbjct: 590 ASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIR 649

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C +  ++ A +L      +G       Y+ L+HGLC+ G V+DA  L   M+K   +P
Sbjct: 650 AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+V Y T++ G  K G  +K   +   +    + P+  +Y I + G C   +  +A + L
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLL 769

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
           N+   +GILP  +T++     +   G
Sbjct: 770 NEMTEKGILPDAVTYNAFTNGLCKEG 795



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 238/490 (48%), Gaps = 52/490 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + ++A   L  + E G  P+   Y T+I+G  K G++  AL + D+M  +G+  N
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------------------------------- 197
            V  N LI GF K     +A+ + E ++                                
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIR 455

Query: 198 --METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             +  ++ PN      +++GLCK G+  E +E+W R+       +  T  + IHGLCKAG
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
           N++   ++ R+M+E G+  D +TYN +I G C+ GK+KE FEL E M +KG   ++ ++N
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +L+ GL    K+DEA  +W   ++     +  T+GV+I+G CK   + +   +LNE+   
Sbjct: 576 LLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK 635

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                              G +  A  L + M   G  L+  T +SLM+G      +++A
Sbjct: 636 KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDA 695

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM ++G  P VV Y T+I G  K+ +  +    ++EM      P+  TY+++I+G
Sbjct: 696 KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDG 755

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+  K   A KL  +  +KG  PD   YN   +GLC  GKVE+A ++   M       +
Sbjct: 756 FCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815

Query: 538 LVTYNTLMDG 547
            +TY TL+DG
Sbjct: 816 EITYTTLIDG 825



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 28/442 (6%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           + K   P  V L S+IQ + K+    +A +V + M           F      LC K +F
Sbjct: 388 LSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF 447

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
             A  F+  +  + L+P+     T+++GL K+G    A+ ++  +  +G   N+V  N L
Sbjct: 448 VTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL 507

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  K G+     ++  R ++E  +  + +TYN +I+G CK G+  E  E+ + M K  
Sbjct: 508 IHGLCKAGNMQETLKLL-RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + D +T+   +HGLC A  ++ A R++ E  ++G   +  TY  MIDG+C+A K++E  
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626

Query: 297 ELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L  E++ +K  LN V YN LIR    NG ++ A  + + ++ +       T+  L++GL
Sbjct: 627 NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686

Query: 356 CKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNA 398
           C  G ++ A  +L+E+ + G                  G++     ++  M  H    N 
Sbjct: 687 CNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNK 746

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +T   +++GF +  K + A  L  EM+ KG  P  V+YN   NGLCK  +  EA+    E
Sbjct: 747 FTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDE 806

Query: 459 MLEKGWKPDMITYSLLINGLCQ 480
           M       D ITY+ LI+G  Q
Sbjct: 807 MSSGAVCLDEITYTTLIDGCHQ 828


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/608 (27%), Positives = 293/608 (48%), Gaps = 37/608 (6%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
           P  AL  F     +P +  S  +F  IL  L+   L+     ++E +   + +   DV +
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLI 158

Query: 78  S-------VIQAYGKNSM-PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +       V     +N + PD      +  N I      +L  +    KAK     + + 
Sbjct: 159 AGHVXCLLVFDKMIRNGLLPD-----VKNCNRILR----VLRDENLLSKAKNVYGMMEQF 209

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+KP V +Y T+++   K G +  AL +  EM ERG   N V YN+L++G  KKG+  +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K + E + + + +  +  TYN +ING C+ G F E  ++ + M          TY + ++
Sbjct: 270 KGLIEEM-LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
           GLCK   V G    + +M++S    D V++N+++ G+CR G I E F L+ E+  R    
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            V++YN LI GL   G +D A+ + + + ++    D  T+ +L+NG  K GY++ A    
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           NE                  M   G K + +  N+ + G ++ +    A  + +EM   G
Sbjct: 449 NE------------------MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P V++YN  ++ LC+   F EA   ++ M+  G  PD +TY+ +ING  ++  +  A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           ++  + L KG  P V  Y +LIH   +   ++ A   +S M +++   N++TYN +++GL
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             T   D+A + ++ + E+ + P+  SY I +   C+     +A     + L R I P +
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 609 ITWHILVR 616
            T  + ++
Sbjct: 671 FTHSVFLK 678



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 242/501 (48%), Gaps = 20/501 (3%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + +   GL PDV +   ++  L     L  A  V+  M + G++  VV YN ++D + K
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           +G   +A E+   +  E   YPN VTYNV++NGL K G  ++   + + M  +     ++
Sbjct: 228 EGRVDQALELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEV 301
           TY   I+G C+ G    A  +  EMV    F    TYN ++ G C+  ++        ++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           +  K   ++VS+N L+ G    G + EA  +++ L+ ++      T+  LI+GLC  GYL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           + A+++  E                  M   G   + +T   L+NG  +   +  A   F
Sbjct: 407 DAALRLKKE------------------MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM  KG  P   +YNT I G  K+     A+S  +EML  G+ PD+ITY++ ++ LCQ 
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
              + A  L    +  G  PD   Y  +I+G    G +  A ++++ M  +   P++VTY
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+         D A   ++ +LE+ +  ++I+YN  + GLC   RM +A+++ ++   
Sbjct: 569 TVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628

Query: 602 RGILPTTITWHILVRAVMNNG 622
           +GILP   ++ IL+    N G
Sbjct: 629 KGILPNKFSYTILINESCNMG 649



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 35/236 (14%)

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + +F +M R G  P V + N ++  L       +A +    M + G KP ++TY+ +++ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE----------------- 520
            C+  ++D AL+L  +  ++G  P+   YN+L++GL   G++E                 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 521 ------------------DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
                             +A  L   M  R   P L TYNTLM GL K          ++
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +L+ +  PDI+S+N  L G C    +S+AF   ++  CR ++PT IT++ L+  +
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++  FE+A   L ++   GL PD  +Y ++ING VK+G L  A  VF+EM  +GV  +
Sbjct: 505 LCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPS 564

Query: 170 VVCYNILIDGFFKKG----DYMRAKEIWERLVM--------------------------- 198
           VV Y +LI     K      +M   ++ E+ V                            
Sbjct: 565 VVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFD 624

Query: 199 ---ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
              E  + PN  +Y ++IN  C  G ++E L ++  M   + + DSFT+  F+  L +  
Sbjct: 625 EMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDY 684

Query: 256 NVEGAE 261
            V   +
Sbjct: 685 QVHAVQ 690


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 271/548 (49%), Gaps = 52/548 (9%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D+ALS     GK   P  AL VFQ+M  +                            LKP
Sbjct: 135 DIALSAYLHAGK---PHVALQVFQKMIRL---------------------------KLKP 164

Query: 134 DVYSYGTVINGLVK---SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           ++ +  T++ GLV+   S  +  A  VFD+M + GV  +V  +N+L++G+  +G    A 
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDAL 224

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + ER+V E +V P+ VTYN ++  + K GR  +  ++   MK+N    +  TY + ++G
Sbjct: 225 GMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYG 284

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLN 309
            CK G+++ A ++   M ++ I  D  TYN +I+G C AG I+E  EL +VM   K   +
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPD 344

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+YN LI G  E G   EA  + E +       +  TH + +  LCK            
Sbjct: 345 VVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCK------------ 392

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
             EE  E        LV   + HG   +  T ++L+  +++   L  A+ + +EM +KG 
Sbjct: 393 --EEKREEVTRKVKELV---EMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
               ++ NT+++ LCK  +  EA++ +    ++G+  D +TY  LI G  + +K++ A +
Sbjct: 448 KMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFE 507

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +  +   TP VT +N LI GLC  GK E A++ +  + +   +P+  T+N+++ G  
Sbjct: 508 MWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYC 567

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  +KA E +N  ++   +PD  + NI L GLC       A  F N  +    +  T+
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTV 626

Query: 610 TWHILVRA 617
           T++ ++ A
Sbjct: 627 TYNTMISA 634



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 249/511 (48%), Gaps = 29/511 (5%)

Query: 124 NSLWEKGL----KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           NSL    L     P    +   ++  + +G    AL VF +M    ++ N++  N L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIG 175

Query: 180 FFKKGDYMR---AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM-KKN 235
             +         A+E+++ +V +  V  +V T+NV++NG C  G+ ++ L M +RM  + 
Sbjct: 176 LVRYPSSFSIASAREVFDDMV-KIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEF 234

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D+ TY + +  + K G +   + +  +M  +G+  + VTYN ++ G+C+ G +KE 
Sbjct: 235 NVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEA 294

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F++ E+M +   L ++ +YNILI G+   G + E + + ++++      D  T+  LI+G
Sbjct: 295 FQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG 354

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
             + G                     +A  L+ +M+  G K N  T N  +    +  K 
Sbjct: 355 CFELGLS------------------LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKR 396

Query: 415 ENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           E      KE+    G SP +V+Y+TLI    KV     A   ++EM +KG K + IT + 
Sbjct: 397 EEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +++ LC+ +K+D A  L     ++G+  D   Y  LI G     KVE A +++  MK+  
Sbjct: 457 ILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIK 516

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P + T+N+L+ GL   G  + A+E ++ + E  L PD  ++N  + G C   R+  AF
Sbjct: 517 ITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAF 576

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           EF N+++     P   T +IL+  +   G +
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 205/403 (50%), Gaps = 21/403 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    ++A + +  + +  + PD+ +Y  +ING+  +G +   L + D M    ++ +V
Sbjct: 286 CKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDV 345

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL-EMW 229
           V YN LIDG F+ G  + AK++ E++  +  V PN VT+N+ +  LCK  + +E   ++ 
Sbjct: 346 VTYNTLIDGCFELGLSLEAKKLMEQMEND-GVKPNQVTHNISLKWLCKEEKREEVTRKVK 404

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + ++ +    D  TY + I    K G++ GA  + REM + GI ++ +T N ++D  C+ 
Sbjct: 405 ELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ E   L +   ++G  ++ V+Y  LI G     KV++A  +W+ ++        TT 
Sbjct: 465 RKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTF 524

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI GLC +G    A++  +E+ E G                 EGR+  A    N   K
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIK 584

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           H  K + YTCN L+NG  +    E A+  F  +  +    T V+YNT+I+  CK ++  E
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDT-VTYNTMISAFCKDKKLKE 643

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           AY  + EM EK  +PD  TY+ +I  L +  K+  A +L  +F
Sbjct: 644 AYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 37/250 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y +    +KA +++  M  I        F    G LC   + E A    + L E 
Sbjct: 491 TLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAES 550

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL PD  ++ ++I G  K G +  A   ++E  +   + +    NIL++G  K+G   +A
Sbjct: 551 GLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              +  L+ E  V  + VTYN MI+  CK  +  E  ++   M++   E D FTY S I 
Sbjct: 611 LNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIIT 668

Query: 250 GLCKAGNVEGAERVYREMVESGIF-------------------------VDAVTYNAMID 284
            L + G +  A+ + ++   SG F                          +A+ Y+ +I+
Sbjct: 669 SLMEDGKLSEADELLKKF--SGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVIN 726

Query: 285 GFCRAGKIKE 294
             C  G++KE
Sbjct: 727 ELCSRGRLKE 736


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 256/520 (49%), Gaps = 27/520 (5%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA     KR  E     L+   E G  PDV+SY  ++  L   G    A  +   M E 
Sbjct: 160 CEA-----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214

Query: 165 GV--ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G     NVV YN +IDGFFK+GD  +A ++++ +V +  + P++VTYN +++ LCK    
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV-QRGIPPDLVTYNSVVHALCKARAM 273

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+      +M       +++TY + I+G    G  + A RV++EM    I  D VT + +
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +   C+ GKIKE  ++++ M  KG   +V SYNI++ G    G + +   +++L+     
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T  VLI      G L+KA+ I NE                  M  HG K +  T 
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNE------------------MRDHGVKPDVVTY 435

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +++    +  K+++A+  F +M  +G +P   +YN LI G C      +A   + E++ 
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G   D++ +S +IN LC+  ++  A  +    +  G  PD  +YN+L+ G C  GK+E 
Sbjct: 496 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK 555

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+++  M      PN+V Y TL++G  K G  D+ L ++  +L+  ++P  I Y+I + 
Sbjct: 556 ALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           GL    R   A    ++    GI     T++I++R +  N
Sbjct: 616 GLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKN 655



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 300/665 (45%), Gaps = 85/665 (12%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V++                 +A  
Sbjct: 115 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVNII----------------IANH 154

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 155 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    P+V +Y TVI+G  K GD+  A  +F EM +RG+  ++V YN ++    K    M
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAM 273

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V PN  TYN +I G    G++ E + ++  M+++    D  T    
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  LCK G ++ A  V+  M   G   D  +YN M++G+   G + +  +L+++M   G 
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 308 L------------------------------------NVVSYNILIRGLLENGKVDEAIS 331
                                                +VV+Y  +I  L   GK+D+A+ 
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--------------- 376
            +  + ++    D   +  LI G C +G L KA ++++E+   G                
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR+ DA ++ +     G   +A   N LM+G+    K+E A+ +F  M   G  P VV
Sbjct: 514 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 573

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
            Y TL+NG CK+ R  E  S  +EML++G KP  I YS++I+GL ++ +   A     + 
Sbjct: 574 GYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEM 633

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G   D+  YNI++ GL      ++A+ L+  ++  N   N++T NT++DG+F+T   
Sbjct: 634 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 693

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++A +++  I   RL P +++Y+I +  L     + +A +  +     G  P +   + +
Sbjct: 694 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 753

Query: 615 VRAVM 619
           VR ++
Sbjct: 754 VRELL 758



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 246/517 (47%), Gaps = 21/517 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ ++     ++ G  ++     AL +      E G   +V
Sbjct: 126 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 185

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSV-YPNVVTYNVMINGLCKCGRFDECLEMW 229
             Y+IL+     +G   +A ++   +    +V  PNVV YN +I+G  K G  ++  +++
Sbjct: 186 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 245

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  TY S +H LCKA  ++ AE   R+MV   +  +  TYN +I G+   
Sbjct: 246 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 305

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ KE   +++ M R   L +VV+ ++L+  L + GK+ EA  +++ +  K  N D  ++
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++NG     Y  K             G L D   L + M   G   + YT N L+  +
Sbjct: 366 NIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD 
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C    +  A +L  + +  G   D+  ++ +I+ LC  G+V DA  ++  
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
                  P+ V YN LMDG    G  +KAL +++ ++   + P+++ Y   + G C   R
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + +      + L RGI P+TI + I++  +   G + 
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 197/411 (47%), Gaps = 20/411 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA    N + + G+KPDV +Y TVI  L + G +  A+  F++M ++GV  +   YN 
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI GF   G  ++AKE+    +M   ++ ++V ++ +IN LCK GR  +   ++D     
Sbjct: 473 LIQGFCTHGSLLKAKELISE-IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D+  Y   + G C  G +E A RV+  MV +GI  + V Y  +++G+C+ G+I E 
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L+  M ++G   + + Y+I+I GL E G+   A   +  + E     D  T+ +++ G
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 651

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L KN   ++AI +  E+                       K+N  T N++++G  Q  ++
Sbjct: 652 LFKNRCFDEAIFLFKELR------------------AMNVKINIITLNTMIDGMFQTRRV 693

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  LF  +SR    P+VV+Y+ +I  L K     EA      M   G +P+    + +
Sbjct: 694 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 753

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           +  L +  +I  A     +  ++ F+ +     +L+    S G   + ++ 
Sbjct: 754 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 804



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S TY   +    +A   E A   + +++ +G+ V+ +  N +++GFC A +  E  + L 
Sbjct: 114 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILL 173

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SY+IL++ L + GK  +A  +  ++ E    C+ +   +  +I+G  
Sbjct: 174 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFF 233

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T NS+++   +A  ++ 
Sbjct: 234 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYNSVVHALCKARAMDK 275

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  K   P   +YN LI G     ++ EA    KEM      PD++T S+L+ 
Sbjct: 276 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 335

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  YNI+++G  + G + D   L+  M      P
Sbjct: 336 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  T+N L+      G  DKA+ I+N + +  ++PD+++Y   +  LC   +M DA E  
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G+ P    ++ L++    +G+
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGS 482


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 274/555 (49%), Gaps = 22/555 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------LC-- 111
           L LIE +  + P  +  + +I    + S  ++A+D   RM     C   +      LC  
Sbjct: 296 LSLIEKED-FVPNTILYNKMISGLCEASFFEEAMDFLNRMRST-SCIPNVQTYRILLCGC 353

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR L+ +  +G  P    + ++++   KS D   A  +  +M +   +   
Sbjct: 354 LNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413

Query: 171 VCYNILIDGFFKKGD------YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           V YNILI      G+      +  A++ +  ++   +V  N V        LC  G+F++
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL-NKVNVVSFARCLCGFGKFEK 472

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++   M  N    D+ TY   I  LC A  VE A  +++EM  +G+  D  TY  +ID
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            F +AG IK+     + M R GC   VV+Y  LI   L+  KV  A  ++EL+  K C  
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI+G CK+G + KA QI   +   G+  + D        +    K N  T  +
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMR--GDADIPDVDMYFKIKNNVAEKPNVVTYGA 650

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +A K+++A  L + M   GC P  + Y+ LI+G CK  +  EA     +M+E+G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P++ TYS LI+ L + K++D+ LK+  + L+    P++ +Y  +I GL    K ++A 
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG  K G  DK LE++  +  +   P+ ++Y + +   
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 584 CSCSRMSDAFEFLND 598
           C+   + +A+  L +
Sbjct: 831 CATGHLDEAYALLEE 845



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/627 (24%), Positives = 268/627 (42%), Gaps = 92/627 (14%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------------NEIFG-- 104
           RIL ++  + CY    +  S++ AY K+     A  + ++M            N + G  
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGL---KPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           C  G L     FE A++  N +   G    K +V S+   + G    G    A  V  EM
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEM 480

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
              G   +   Y+ +I GF      +       + +  T V P+V TY ++I+   K G 
Sbjct: 481 MGNGFVPDTSTYSEVI-GFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             +     D M ++  E    TY + IH   KA  V  A  ++  M+  G F + +TY A
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-----------------NVVSYNILIRGLLENG 324
           +IDG+C++G I++  +++  M     +                 NVV+Y  L+ GL +  
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           KV +A  + E +    C  ++  +  LI+G CK   L++A ++ +               
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH--------------- 704

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
              +M + G   N YT +SL++   +  +L+  + +  +M    C+P +V Y  +I+GL 
Sbjct: 705 ---KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           KV +  EAY  +  M EKG KP+++TY+ +I+G  ++ K+D  L+L  +   KG  P+  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMK---------------------------------K 531
            Y +LI+  C+ G +++A  L   MK                                 K
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS--YNITLKGLCSCSRM 589
               P ++ Y  L+D   K G  + ALE+   ++   +        Y   +      S++
Sbjct: 882 NGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKI 941

Query: 590 SDAFEFLNDALCRGILPTTITW-HILV 615
             AFE   D +  G++P   T+ H+L+
Sbjct: 942 DHAFELFYDMIRDGVIPDLGTFVHLLM 968



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 222/509 (43%), Gaps = 106/509 (20%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC   + E A      +   G+ PDVY+Y  +I+   K+G +  A    DEM   G E
Sbjct: 497 GFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCE 556

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             VV Y  LI  + K      A E++E L++    +PNV+TY  +I+G CK G  ++  +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615

Query: 228 MWDRM---------------KKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM               K N  EK +  TY + + GLCKA  V+ A  +   M   G
Sbjct: 616 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+A K+ E  E++  M  +G   NV +Y+ LI  L ++ ++D  +
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVL 735

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GL K    ++A +++  +EE                 
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE----------------- 778

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN--------- 441
             GCK N  T  ++++GF +A K++  + LF+EM  KGC+P  V+Y  LIN         
Sbjct: 779 -KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 442 -------------------GLCKV-----ERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                                CKV       F  +   ++E+ + G  P ++ Y +LI+ 
Sbjct: 838 EAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDN 897

Query: 478 LCQS-------------------------------------KKIDMALKLCCQFLQKGFT 500
             ++                                      KID A +L    ++ G  
Sbjct: 898 FVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVI 957

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           PD+  +  L+ GL    + E+ALQL  ++
Sbjct: 958 PDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 153/618 (24%), Positives = 262/618 (42%), Gaps = 55/618 (8%)

Query: 25  FDSATREPGYAHSPHLFHHI------LRRLIDP--KLVVHVSRILELIEIQKCYCPEDVA 76
           F S+   P Y+HS    H        L  L+DP   L    SR+       +C+ P++V+
Sbjct: 26  FFSSNPFPIYSHSSPFAHFSTSSPDDLPGLVDPDQSLSSDTSRV-------QCFSPQEVS 78

Query: 77  L---SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           L   S++ ++  +    + L   +  NE F     I      F +    +   + + L P
Sbjct: 79  LLRDSLLDSHADSCSSHRTLQTVKISNEAFLILDAIRNCDDGFGEKTHIVLRQFRQKLNP 138

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+      I   +KS +L     ++    + G +     Y  L+D  F++G Y R  E +
Sbjct: 139 DLV---VEILSFLKSPELCVKFFLWAGR-QIGYDHTPAVYIALLD-VFERGSYDRVPEEF 193

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            R +            NV+I   C+ G ++  LE   R+K    +    TY + +    +
Sbjct: 194 LREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLR 253

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSY 313
           A  ++ A+ V+REM E G+ +D  T        C+ GK +E   L E        N + Y
Sbjct: 254 ADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE--KEDFVPNTILY 311

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I GL E    +EA+     +R  +C  +  T+ +L   LC  G LNK          
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRIL---LC--GCLNKK--------- 357

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               +L     +++ M   GC  +    NSL++ + ++     A  L K+M +  C P  
Sbjct: 358 ----QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING---------LCQSKKI 484
           V YN LI  +C         +F  E+ EK +  +M++   ++N          LC   K 
Sbjct: 414 VVYNILIGSICSGGELPGPVTF--ELAEKAYN-EMLSAGTVLNKVNVVSFARCLCGFGKF 470

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           + A K+  + +  GF PD + Y+ +I  LC+A +VE+A  L+  MK    VP++ TY  L
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D   K G   +A    + ++ +   P +++Y   +       ++S A E     + +G 
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 605 LPTTITWHILVRAVMNNG 622
            P  IT+  L+     +G
Sbjct: 591 FPNVITYTALIDGYCKSG 608


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 278/537 (51%), Gaps = 33/537 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I  YG     D A  + +R+ E  GC   +         L +KR+ ++A    + + +
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALTLFD-VMK 378

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K  KP++ +Y  +I+ L  +G +  A  + DEM   G+  N++  NI++D   K      
Sbjct: 379 KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  I+E    E    PN VTY  +I+GL K G+ D+   ++++M     + +   Y S I
Sbjct: 439 AHRIFES-ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
                 G  E   ++Y+EM+  G   D    N  +D   +AG++++   ++E M   G L
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V SY+ILI GL + G+  E  +I++ + ++    D+  +  +++GLCK+G ++KA ++
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L E++                  KH       T  S+++G  +  +L+ A  LF+E   K
Sbjct: 618 LEEMKV-----------------KH-VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G    V+ Y++LI+G  KV R  EAY  ++EM++KG  P++ T++ L++ L ++++ID A
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719

Query: 488 LKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           L +C Q +++   +P+   Y+ILI+GLC   K   A   +  M+K+  +PN+VTY T++ 
Sbjct: 720 L-ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           GL K G+   A  ++         PD  S+N  ++G+ + +R  +A++   +   RG
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 239/459 (52%), Gaps = 21/459 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q E+A R   S  E+G  P+  +Y ++I+GL K G +  A  +F++M + G + N
Sbjct: 430 LCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y  LI  FF  G      +I++ ++      P++   N  ++ + K G  ++   ++
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG-RPDLTLLNTYMDCVFKAGEVEKGRAIF 548

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D  +Y   IHGL KAG       +++ M + G  +DA  YNA++DG C++
Sbjct: 549 EDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKS 608

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ + +E+ E M  K     V +Y  ++ GL +  ++DEA  ++E  + K    +   +
Sbjct: 609 GKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILY 668

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  K G +++A  IL E                  M K G   N YT NSLM+  
Sbjct: 669 SSLIDGFGKVGRIDEAYLILEE------------------MMKKGLTPNVYTWNSLMDAL 710

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++  +++ A+  F+ M    CSP   +Y+ LINGLC+V+++ +A+ F +EM ++G  P++
Sbjct: 711 VKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNV 770

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I+GL +   I  A  L  +F   G  PD   +N LI G+ +A +  +A Q++  
Sbjct: 771 VTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEE 830

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            + R C  N+ T  +L+D L KT +C +   I   +L E
Sbjct: 831 TRLRGCRLNVKTCISLLDALNKT-ECLEQAAIVGAVLSE 868



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 273/507 (53%), Gaps = 21/507 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F+ A + L  L E+G  P V S+ +++  L K   +  AL +FD M ++  + N+  YN
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYN 389

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I+ID     G    A +I + + +   ++PN+++ N+M++ LCK  + +E   +++   +
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMEL-AGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASE 448

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +S TYCS I GL K G ++ A R++ +M+++G   + + Y ++I  F   G+ ++
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 295 CFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +++ E++ R G  ++   N  +  + + G+V++  +I+E ++      D  ++ +LI+
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GL K                 G+ R  + +++   M + G  L+A   N++++G  ++ K
Sbjct: 569 GLTK----------------AGQAR--ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ A  + +EM  K   PTV +Y ++++GL K++R  EAY   +E   KG + ++I YS 
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G  +  +ID A  +  + ++KG TP+V  +N L+  L    ++++AL  + +MK+  
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN  TY+ L++GL +    +KA   W  + ++ L P++++Y   + GL     ++DA+
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAY 790

Query: 594 EFLNDALCRGILPTTITWHILVRAVMN 620
                    G +P + +++ L+  + N
Sbjct: 791 SLFERFKTNGGIPDSASFNALIEGMSN 817



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 179/646 (27%), Positives = 312/646 (48%), Gaps = 43/646 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI A R L      + P +A  +   A  E   A  P     +LR++ D    V V    
Sbjct: 163 VIGAMRHLKF----RPPFSAYTVLIGALAE---ARQPERALELLRQMQDVGYEVSVPLFT 215

Query: 62  ELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
            L+         + AL+++ +  G    PD  L  +    + FG +AG        + A 
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVL--YNVCIDCFG-KAG------SVDMAW 266

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC---YNILI 177
           +F + L   GL+PD  SY +++  L K+G L  A  +F +M     E +V C   YN +I
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM---EAERDVPCAYAYNTMI 323

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G+     +  A ++ ERL  E    P+VV++N ++  L K  + DE L ++D MKK+ +
Sbjct: 324 MGYGSAERFDDAYKLLERL-RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK 382

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
              S TY   I  LC AG V  A ++  EM  +G+F + ++ N M+D  C+A +++E   
Sbjct: 383 PNIS-TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           ++E    +GC  N V+Y  LI GL + GK+D+A  ++E + +   +A+   +  LI    
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501

Query: 357 KNGYLNKAIQILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAY 399
            +G      +I  E +  GG                 G +    ++   M   G   +  
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR 561

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           + + L++G  +A +      +F+ MS++G +    +YN +++GLCK  +  +AY  ++EM
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM 621

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             K   P + TY  +++GL +  ++D A  L  +   KG   +V +Y+ LI G    G++
Sbjct: 622 KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRI 681

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A  +   M K+   PN+ T+N+LMD L KT + D+AL  +  + E +  P+  +Y+I 
Sbjct: 682 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSIL 741

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + GLC   + + AF F  +   +G++P  +T+  ++  +   G  T
Sbjct: 742 INGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNIT 787



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 112/237 (47%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           LA    ++  M   G  L    C +L+   +++ +LE+A  +   M      P   +Y  
Sbjct: 122 LAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTV 181

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI  L +  +   A   +++M + G++  +  ++ L+  L +  +++ AL L  +     
Sbjct: 182 LIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSC 241

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+ +YN+ I     AG V+ A + +  +K     P+ V+Y +++  L K G   +A 
Sbjct: 242 LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAE 301

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           E++  +  ER  P   +YN  + G  S  R  DA++ L     RG +P+ ++++ ++
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSIL 358


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 251/486 (51%), Gaps = 20/486 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +G ++  LVK+      + +F  M   G+++N +  NILI+ +        A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           + + +++    P+++TY  +I GLC  G+  E L   DR+     + D  +Y + I+GLC
Sbjct: 107 FAK-ILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLC 165

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K G    A R+ R++       D V YN +IDG C+   +++ F+L+ E+  ++   NVV
Sbjct: 166 KIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV 225

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G++D+A  +   +  KN N +  T   L++GLCK              
Sbjct: 226 TYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCK-------------- 271

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A SLV  M K G   + +T N+LM+G+    +   A  +F  M++ G + 
Sbjct: 272 ----EGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTC 327

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SY+ +I+GL K++   EA    + M  +   PD++ YS LI+GLC+S +I+ ALK  
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYV 387

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G  P+V  Y  LI  LC + +V+ A+ L   +K +    N+ TYN L+DGL K 
Sbjct: 388 DEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKD 447

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A +++  +L +    D+++Y+I + GLC  S   +A   L+    +G +P  I +
Sbjct: 448 GRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAY 507

Query: 612 HILVRA 617
             ++ A
Sbjct: 508 ETIINA 513



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 253/485 (52%), Gaps = 30/485 (6%)

Query: 92  ALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            + +FQRM E+ G ++  +         C  RQ   A      + + G +PD+ +Y T+I
Sbjct: 68  VIHLFQRM-ELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLI 126

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            GL  +G +  +L   D +  +G++ + V Y  LI+G  K G    A  +  ++  E   
Sbjct: 127 RGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEIC- 185

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+VV YN +I+GLCK     +  +++  M +     +  TY S I+G C  G ++ A  
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +  EMV   +  +  T+N ++DG C+ GK++E   L  VM ++G   +V +YN L+ G  
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
              +  +A +++ ++ +     D  ++ V+I+GL K   L++A+ +   +    E  + D
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR--NENVIPD 363

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                           AY+  SL++G  ++ ++ +A+    EM  +G  P V++Y +LI+
Sbjct: 364 VV--------------AYS--SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLID 407

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LCK  +  +A + +K++ ++G + +M TY++L++GLC+  ++  A K+    L KG   
Sbjct: 408 ALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNV 467

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y+I+I+GLC     ++AL L S M+ + CVP+ + Y T+++  F+    DKA ++ 
Sbjct: 468 DVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLL 527

Query: 562 NHILE 566
             +++
Sbjct: 528 REMID 532



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 260/509 (51%), Gaps = 30/509 (5%)

Query: 86  NSMPD--KALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           +S+P+   A+D F RM  +        FG   G L + + +         +   G++ + 
Sbjct: 25  HSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNY 84

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +   +IN       +  A +VF ++ + G + +++ Y  LI G    G    +    +R
Sbjct: 85  ITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDR 144

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +  +  + V+Y  +INGLCK G+    L +  +++      D   Y + I GLCK  
Sbjct: 145 LVSQ-GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDK 203

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            V  A  +Y EM E  +F + VTY ++I GFC  G++ + F L   M  K    NV ++N
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 263

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            L+ GL + GK+ EA S+  ++ ++    D  T+  L++G     +L         V+E 
Sbjct: 264 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY----FL---------VKEA 310

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
           G+     A ++ N M + G   + ++ + +++G  +   L+ A+ LF+ M  +   P VV
Sbjct: 311 GK-----AKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV 365

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y++LI+GLCK  R   A  +V EM ++G  P++ITY+ LI+ LC+S ++D A+ L  + 
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
             +G   ++  YNIL+ GLC  G++ DA +++ ++  +    ++VTY+ +++GL K    
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGL 583
           D+AL + + + ++   PD I+Y   +   
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAF 514



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 236/470 (50%), Gaps = 20/470 (4%)

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
           +L  A+  F+ M        ++ +  ++    K   Y     +++R+ +   +  N +T 
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELH-GIQSNYITL 87

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N++IN  C   + +    ++ ++ K   + D  TY + I GLC  G V+ +   +  +V 
Sbjct: 88  NILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVS 147

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            GI +D V+Y  +I+G C+ G+      L   +  + C  +VV YN +I GL ++  V +
Sbjct: 148 QGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRD 207

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  ++  + EK    +  T+  LI G C  G L+KA  +LNE+             ++  
Sbjct: 208 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM-------------VLKN 254

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           ++ + C     T N+L++G  +  K+  A  L   M ++G  P V +YN L++G   V+ 
Sbjct: 255 VNPNVC-----TFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKE 309

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
            G+A +    M + G   D+ +YS++I+GL + K +D A+ L      +   PDV  Y+ 
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS 369

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI GLC +G++  AL+    M  R   PN++TY +L+D L K+   DKA+ +   I ++ 
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           ++ ++ +YNI + GLC   R++DA +   D L +G     +T+ I++  +
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGL 479



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 103/208 (49%)

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F     L +AI  F  M R    P ++ +  ++  L K + +       + M   G + +
Sbjct: 24  FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            IT ++LIN  C  ++I+ A  +  + L+ G+ PD+  Y  LI GLC  G+V+++L  + 
Sbjct: 84  YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD 143

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            +  +    + V+Y TL++GL K G    AL +   I  E  RPD++ YN  + GLC   
Sbjct: 144 RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDK 203

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
            + DAF+   +   + + P  +T+  L+
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLI 231



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/108 (21%), Positives = 48/108 (44%)

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S   + DA+  ++ M +    P ++ +  ++  L KT      + ++  +    ++ + I
Sbjct: 26  SLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYI 85

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + NI +   C   +++ AF      L  G  P  IT+  L+R +  NG
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNG 133


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 273/551 (49%), Gaps = 60/551 (10%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+ +F RM ++        F    G + + R +  A      +  KG+ P   ++  +
Sbjct: 36  DDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNIL 95

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN     G +  A +V  ++ + G   NVV +  L+ GF      + A  I++ +V    
Sbjct: 96  INCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRI 155

Query: 202 VYPNVVTYNVMINGLCKC--GRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLCKAGNVE 258
            + +V+ Y  +INGLCK   G+    +++  +M++ +  K +   Y + +HGLCK GN+ 
Sbjct: 156 RFDDVL-YGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNIN 214

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
            A  +  +M+  GIF D  TY+++I G CRAG+ KE               V S   L+ 
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKE---------------VTS---LLN 256

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G   N KVDEA  ++ ++ E+    D   + +L+NG C N                   +
Sbjct: 257 GFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNN------------------K 298

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A  L + M + G + +  T   LM+G+    K++ A  LF  M  +G  P V SYN 
Sbjct: 299 VGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNI 358

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL------CC 492
           LI G CK ER GEA + +++M  K   P++ITY+ +++GLC+S  I  A KL      CC
Sbjct: 359 LIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCC 418

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVPNLVTYNTLMDGLFKT 551
           Q       PDVT YNIL+  LC    VE A+  + ++  +R+  PN+ +YN L+ G  K 
Sbjct: 419 QP-----PPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKN 473

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
              D+A+ ++NH+  + L PDI++YNI L  L +  ++  A   L   + +GI P   T+
Sbjct: 474 RRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTY 533

Query: 612 HILVRAVMNNG 622
           +IL+  +   G
Sbjct: 534 NILINGLHKGG 544



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 235/472 (49%), Gaps = 42/472 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   Q + A   +  + + G +P+V ++ T++ G   +  +L AL ++DEM  R +  +
Sbjct: 99  FCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFD 158

Query: 170 VVCYNILIDGFFKK--GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            V Y  LI+G  K   G    A ++ +++     V PN++ YN +++GLCK G  +E   
Sbjct: 159 DVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARV 218

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGN----------------VEGAERVYREMVESG 271
           +  +M       D FTY S I+GLC+AG                 V+ A  ++  M+E G
Sbjct: 219 LCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERG 278

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
              D + YN +++G+C   K+ E  +L+ +M  +G   + ++Y IL+ G     KVDEA 
Sbjct: 279 EQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEAR 338

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL---------------NEVEEG- 374
           +++  + E+    D  ++ +LI G CK   + +A+ +L               N V +G 
Sbjct: 339 NLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGL 398

Query: 375 -GEGRLADAASLVNRMDKHGC---KLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGC 429
              G + DA  LV+ M  H C     +  T N L+    +   +E AI  FK +   +  
Sbjct: 399 CKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSF 456

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P V SYN LI+G CK  R  EA +    M  K   PD++TY++L++ L   +++D A+ 
Sbjct: 457 APNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIA 516

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           L  Q + +G +P++  YNILI+GL   G+ + A ++   +  R   P++ TY
Sbjct: 517 LLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 226/478 (47%), Gaps = 74/478 (15%)

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK    D+ + ++ RM           +   +  + K      A  +Y  M   G+    
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           VT+N +I+ FC  G++   F +   + + GC  NVV++  L++G   N K+ +A+ I++ 
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 336 LREKNCNADSTTHGVLINGLCKN--GYLNKAIQILNEVEEGG------------------ 375
           +  +    D   +G LINGLCK+  G    A+Q+L ++EE                    
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 376 EGRLADAASLVNRMDKHGCKLNAYT----------------CNSLMNGFIQASKLENAIF 419
           +G + +A  L ++M   G   + +T                  SL+NGF   +K++ A  
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF  M  +G    +++YN L+NG C   + GEA      M+E+G +PD ITY++L++G C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
              K+D A  L    +++G  PDV  YNILI G C   +V +A+ L  +M  +N VPN++
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 540 TYNTLMDGLFKTG-----------------------------------DC-DKALEIWNH 563
           TYN+++DGL K+G                                   +C +KA+  + H
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 564 ILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ ER   P++ SYNI + G C   R+ +A    N    + ++P  +T++IL+ A+ N
Sbjct: 450 LIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFN 507



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 38/392 (9%)

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-V 310
           CK  +++ A  ++  MV+       V +  ++    +        +L+ +M  KG +   
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V++NILI      G++D A S+   + +  C  +  T   L+ G C N            
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVND----------- 138

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA--SKLENAIFLFKEMS-RK 427
                  ++ DA  + + M     + +     +L+NG  ++   K   A+ L ++M  R+
Sbjct: 139 -------KMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQ 191

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI------------ 475
              P ++ YNT+++GLCK     EA     +M+ +G  PD+ TYS LI            
Sbjct: 192 LVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEV 251

Query: 476 ----NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
               NG C + K+D A +L    +++G   D+  YNIL++G C   KV +A +L+  M +
Sbjct: 252 TSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVE 311

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           R   P+ +TY  LM G       D+A  +++ ++E  L PD+ SYNI +KG C   R+ +
Sbjct: 312 RGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGE 371

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           A   L D   + ++P  IT++ +V  +  +G 
Sbjct: 372 AMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG 403


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 262/512 (51%), Gaps = 26/512 (5%)

Query: 118 KAKRF--LNSLWEKGLKPDV----YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           K K+F  + SL EK  + ++    Y+Y  +IN   +   +  ALA+  +M + G E ++V
Sbjct: 59  KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV 118

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             + L++G+        A  + +++V E    P+ +T+  +I+GL    +  E + + DR
Sbjct: 119 TLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 177

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   + +  TY   ++GLCK G+ + A  +  +M  + I  D V +N +ID  C+   
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 237

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + +   L++ M  KG   NVV+Y+ LI  L   G+  +A  +   + EK  N +  T   
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+   K                  EG+  +A  L + M K     + +T NSL+NGF  
Sbjct: 298 LIDAFVK------------------EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +L+ A  +F+ M  K C P VV+YNTLI G CK +R  +     +EM  +G   D +T
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI GL      D A K+  Q +  G  PD+  Y+IL+ GLC+ GK+E AL+++  M+
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 459

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           K     ++  Y T+++G+ K G  D   +++  +  + ++P++++YN  + GLCS   + 
Sbjct: 460 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 519

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +A+  L      G LP + T++ L+RA + +G
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 229/464 (49%), Gaps = 22/464 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++   A   ++ + E G +PD  ++ T+I+GL        A+A+ D M +RG + N+
Sbjct: 128 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 187

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V Y ++++G  K+GD   A  +  +  ME + +  +VV +N +I+ LCK    D+ L ++
Sbjct: 188 VTYGVVVNGLCKRGDTDLALNLLNK--MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      +  TY S I  LC  G    A ++  +M+E  I  + VT+NA+ID F + 
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E  +L++ M ++    ++ +YN L+ G   + ++D+A  ++E +  K+C  D  T+
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+                   R+ D   L   M   G   +  T  +L+ G 
Sbjct: 366 NTLIKGFCKSK------------------RVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                 +NA  +FK+M   G  P +++Y+ L++GLC   +  +A      M +   K D+
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +I G+C++ K+D    L C    KG  P+V  YN +I GLCS   +++A  L   
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           MK+   +PN  TYNTL+    + GD   + E+   +   R   D
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 571



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 218/412 (52%), Gaps = 18/412 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++V +N +++ + K  +FD  + + ++M++ E     +TY   I+  C+   +  A  +
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             +M++ G     VT +++++G+C   +I +   L + M   G   + +++  LI GL  
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-------- 374
           + K  EA+++ + + ++ C  +  T+GV++NGLCK G  + A+ +LN++E          
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224

Query: 375 ---------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                        + DA +L   M+  G + N  T +SL++      +  +A  L  +M 
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            K  +P +V++N LI+   K  +F EA     +M+++   PD+ TY+ L+NG C   ++D
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A ++    + K   PDV  YN LI G C + +VED  +L+  M  R  V + VTY TL+
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            GLF  GDCD A +++  ++ + + PDI++Y+I L GLC+  ++  A E  +
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 456



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 225/489 (46%), Gaps = 35/489 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN     K    A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 117 IVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLF---LHNKASEAV 172

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            L++  +Q+   P  V   V+     K    D AL++  +M          IF      L
Sbjct: 173 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  + A      +  KG++P+V +Y ++I+ L   G    A  +  +M E+ +  N+
Sbjct: 233 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 292

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LID F K+G ++ A+++++ ++ + S+ P++ TYN ++NG C   R D+  +M++
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M   +   D  TY + I G CK+  VE    ++REM   G+  D VTY  +I G    G
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 ++++ M   G   ++++Y+IL+ GL  NGK+++A+ +++ +++     D   + 
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 471

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I G+CK                   G++ D   L   +   G K N  T N++++G  
Sbjct: 472 TMIEGMCK------------------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 513

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L+ A  L K+M   G  P   +YNTLI    +      +   ++EM    +  D  
Sbjct: 514 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 573

Query: 470 TYSLLINGL 478
           T  L+ N L
Sbjct: 574 TIGLVANML 582



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 125/245 (51%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA  L   M K     +    N L++   +  K +  I L ++M R      + +YN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LIN  C+  +   A + + +M++ G++P ++T S L+NG C  K+I  A+ L  Q ++ 
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+ PD   +  LIHGL    K  +A+ L   M +R C PNLVTY  +++GL K GD D A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L + N +   ++  D++ +N  +  LC    + DA     +   +GI P  +T+  L+  
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 618 VMNNG 622
           + + G
Sbjct: 267 LCSYG 271



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           +L NGL    K+D A+ L    ++    P +  +N L+  +    K +  + L   M++ 
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             V  L TYN L++   +      AL +   +++    P I++ +  L G C   R+SDA
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 593 FEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
              ++  +  G  P TIT+  L+  + ++N AS
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 262/512 (51%), Gaps = 26/512 (5%)

Query: 118 KAKRF--LNSLWEKGLKPDV----YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           K K+F  + SL EK  + ++    Y+Y  +IN   +   +  ALA+  +M + G E ++V
Sbjct: 97  KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV 156

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             + L++G+        A  + +++V E    P+ +T+  +I+GL    +  E + + DR
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   + +  TY   ++GLCK G+ + A  +  +M  + I  D V +N +ID  C+   
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + +   L++ M  KG   NVV+Y+ LI  L   G+  +A  +   + EK  N +  T   
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+   K                  EG+  +A  L + M K     + +T NSL+NGF  
Sbjct: 336 LIDAFVK------------------EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +L+ A  +F+ M  K C P VV+YNTLI G CK +R  +     +EM  +G   D +T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ LI GL      D A K+  Q +  G  PD+  Y+IL+ GLC+ GK+E AL+++  M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           K     ++  Y T+++G+ K G  D   +++  +  + ++P++++YN  + GLCS   + 
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +A+  L      G LP + T++ L+RA + +G
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 229/464 (49%), Gaps = 22/464 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++   A   ++ + E G +PD  ++ T+I+GL        A+A+ D M +RG + N+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V Y ++++G  K+GD   A  +  +  ME + +  +VV +N +I+ LCK    D+ L ++
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNK--MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      +  TY S I  LC  G    A ++  +M+E  I  + VT+NA+ID F + 
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E  +L++ M ++    ++ +YN L+ G   + ++D+A  ++E +  K+C  D  T+
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+                   R+ D   L   M   G   +  T  +L+ G 
Sbjct: 404 NTLIKGFCKSK------------------RVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                 +NA  +FK+M   G  P +++Y+ L++GLC   +  +A      M +   K D+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +I G+C++ K+D    L C    KG  P+V  YN +I GLCS   +++A  L   
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           MK+   +PN  TYNTL+    + GD   + E+   +   R   D
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 218/412 (52%), Gaps = 18/412 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++V +N +++ + K  +FD  + + ++M++ E     +TY   I+  C+   +  A  +
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             +M++ G     VT +++++G+C   +I +   L + M   G   + +++  LI GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-------- 374
           + K  EA+++ + + ++ C  +  T+GV++NGLCK G  + A+ +LN++E          
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 375 ---------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                        + DA +L   M+  G + N  T +SL++      +  +A  L  +M 
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            K  +P +V++N LI+   K  +F EA     +M+++   PD+ TY+ L+NG C   ++D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A ++    + K   PDV  YN LI G C + +VED  +L+  M  R  V + VTY TL+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            GLF  GDCD A +++  ++ + + PDI++Y+I L GLC+  ++  A E  +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 225/489 (46%), Gaps = 35/489 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN     K    A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLF---LHNKASEAV 210

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            L++  +Q+   P  V   V+     K    D AL++  +M          IF      L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  + A      +  KG++P+V +Y ++I+ L   G    A  +  +M E+ +  N+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LID F K+G ++ A+++++ ++ + S+ P++ TYN ++NG C   R D+  +M++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M   +   D  TY + I G CK+  VE    ++REM   G+  D VTY  +I G    G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 ++++ M   G   ++++Y+IL+ GL  NGK+++A+ +++ +++     D   + 
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I G+CK                   G++ D   L   +   G K N  T N++++G  
Sbjct: 510 TMIEGMCK------------------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L+ A  L K+M   G  P   +YNTLI    +      +   ++EM    +  D  
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611

Query: 470 TYSLLINGL 478
           T  L+ N L
Sbjct: 612 TIGLVANML 620



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 125/245 (51%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA  L   M K     +    N L++   +  K +  I L ++M R      + +YN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LIN  C+  +   A + + +M++ G++P ++T S L+NG C  K+I  A+ L  Q ++ 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+ PD   +  LIHGL    K  +A+ L   M +R C PNLVTY  +++GL K GD D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L + N +   ++  D++ +N  +  LC    + DA     +   +GI P  +T+  L+  
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 618 VMNNG 622
           + + G
Sbjct: 305 LCSYG 309



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           +L NGL    K+D A+ L    ++    P +  +N L+  +    K +  + L   M++ 
Sbjct: 56  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             V  L TYN L++   +      AL +   +++    P I++ +  L G C   R+SDA
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 593 FEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
              ++  +  G  P TIT+  L+  + ++N AS
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 275/575 (47%), Gaps = 31/575 (5%)

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           E++E+   + P + A+S ++    K    D A D+  ++          ++      LC+
Sbjct: 313 EMVELG--FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK 370

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
               +KA+    ++    L  +  +Y  +I+   K G L  A + F  M E G+   +  
Sbjct: 371 GEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI+G  K GD   A+ ++ +++ E  + P   T+  +I+G CK  + ++  +++  M
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINE-GLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            + E     +T+ + I+GLC    +  A +++ EMVE  I    VTYN MI+G+C+A  +
Sbjct: 490 NEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNM 549

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            + FEL E M   G + +  +Y  LI GL   G+V  A    + L +KN   +   +  L
Sbjct: 550 DKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-------EGRLADAA----------SLVNRMDKHGC 394
           ++G C  G L +A+    E+ + G          L D A           L+ +M   G 
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL 669

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + ++    S+++ + +    + +      M  + C P VV+Y   +NGLCKV     A  
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
             ++ML     P+ +TY   ++ L +   +  A  L  + L KG   +   YNILI G C
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFC 788

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G++ +A ++ S M +    P+ +TY+T++    ++GD   A+E+W+ +L + + PD +
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           ++N+ + G C    +  AFE  ND L RG+ P  I
Sbjct: 849 AFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQI 883



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 249/514 (48%), Gaps = 25/514 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P+V +   ++NGL++    +    VFDE    GV+ +    + +I    +  D+ RAK
Sbjct: 179 LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAK 238

Query: 191 E--IWERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           E  +W    ME++ +  ++VTYNV+I+GLCK G   E LE+   +++   ++D  TYC+ 
Sbjct: 239 EKILW----MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G C+    +    +  EMVE G        + ++DG  + G I   ++L   +GR G 
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           L N+  YN LI  L +   +D+A  +++ +   N   +  T+ +LI+  CK G L+ A  
Sbjct: 355 LPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES 414

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
               + E G                  G L+ A  L  +M   G +  A T  +L++G+ 
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++E A  L++EM+ K  +P+V ++  LI GLC      EA     EM+E+  KP  +
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I G C++  +D A +L    L  G  PD   Y  LI GLCS G+V  A     ++
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K+N   N + Y+ L+ G    G   +AL     +++  +  D++ + + + G      M
Sbjct: 595 HKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDM 654

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
              F  L     +G+ P ++ +  ++ A    G+
Sbjct: 655 KRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGS 688



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 248/510 (48%), Gaps = 23/510 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR +QF+     +N + E G  P   +   +++GL K G++  A  +  ++   G   N
Sbjct: 298 FCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPN 357

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEM 228
           +  YN LI+   K  D  +A+ +++   M +   P N VTY+++I+  CK G  D     
Sbjct: 358 LFVYNALINALCKGEDLDKAELLYKN--MHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + RM ++   +  + Y S I+G CK G++  AE +Y +M+  G+   A T+  +I G+C+
Sbjct: 416 FGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++++ F+L+  M  K    +V ++  LI GL    ++ EA  +++ + E+       T
Sbjct: 476 DLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT 535

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + V+I G CK   ++KA ++L +                  M  +G   + YT   L++G
Sbjct: 536 YNVMIEGYCKAHNMDKAFELLED------------------MLHNGLVPDTYTYRPLISG 577

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                ++  A     ++ +K      + Y+ L++G C   R  EA S   EM+++G   D
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMD 637

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++ +++LI+G  + + +     L  +   +G  PD  +Y  +I      G  + + +   
Sbjct: 638 LVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLD 697

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M    C PN+VTY   M+GL K G+ D+A  ++  +L   + P+ ++Y   L  L    
Sbjct: 698 LMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEG 757

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRA 617
            M +A + L+  + +G+L  T T++IL+R 
Sbjct: 758 NMKEATD-LHHEMLKGLLANTATYNILIRG 786



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 29/449 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  Q EKA +    + EK + P VY++  +I GL  + ++  A  +FDEM ER ++   
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN++I+G+ K  +  +A E+ E + +   + P+  TY  +I+GLC  GR     +  D
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDM-LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            + K   + +   Y + +HG C  G +  A     EM++ GI +D V +  +IDG  +  
Sbjct: 593 DLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQ 652

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +K  F L + M  +G   + V Y  +I    + G   ++    +L+  + C  +  T+ 
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 350 VLINGLCKNGYLNKAIQIL----------NEVEEG-------GEGRLADAASLVNRMDKH 392
             +NGLCK G +++A  +           N V  G        EG + +A  L + M K 
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK- 771

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   N  T N L+ GF +  +L  A  +  EM+  G  P  ++Y+T+I   C+    G A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP---------DV 503
                 ML KG +PD + ++LLI G C +  +D A +L    L +G  P         D+
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDL 891

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            + N L+HG C  G+V+ AL+LY +M  R
Sbjct: 892 GVCNFLMHGGCVTGEVDTALRLYHSMLTR 920



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 240/549 (43%), Gaps = 103/549 (18%)

Query: 119 AKRFLNSL-WEKGLKPDVYSYGTVINGLVK------SGDLLGALAVFDE----MFERGVE 167
           A RF N L   K +     S+  +++ LV+      +  LL  L +       +FE+ +E
Sbjct: 79  ALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLE 138

Query: 168 TNVVCYNILIDGF-FKKGDYMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGR 221
           ++  C      GF F    Y++   +++     RL++  ++ P V T + ++NGL +  +
Sbjct: 139 SHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRK 198

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           F    E++D       + D +T  + I  LC+                            
Sbjct: 199 FILVWEVFDESVNAGVKPDPYTCSAVIRSLCE---------------------------- 230

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
            +  FCRA   KE   LW    R   L++V+YN+LI GL + G V EA+ + + LREK  
Sbjct: 231 -LKDFCRA---KEKI-LWMESNRFD-LSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGL 284

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             D  T+  L+ G C+    +  I ++NE+ E G                 +G +  A  
Sbjct: 285 KEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYD 344

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS------------------- 425
           LV ++ + G   N +  N+L+N   +   L+ A  L+K M                    
Sbjct: 345 LVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFC 404

Query: 426 ----------------RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
                             G   T+  YN+LING CK      A     +M+ +G +P   
Sbjct: 405 KRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTAT 464

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T++ LI+G C+  +++ A KL  +  +K   P V  +  LI+GLCS  ++ +A +L+  M
Sbjct: 465 TFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM 524

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +R   P  VTYN +++G  K  + DKA E+   +L   L PD  +Y   + GLCS  R+
Sbjct: 525 VERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRV 584

Query: 590 SDAFEFLND 598
           S A +F++D
Sbjct: 585 SAAKDFIDD 593



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 197/438 (44%), Gaps = 55/438 (12%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMP 89
           E   A S + F  ++  L     +   S++ + + +++   P +V  +V I+ Y K    
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM-VERKIKPTEVTYNVMIEGYCKAHNM 549

Query: 90  DKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           DKA ++ + M       + +     I  LC   +   AK F++ L +K LK +   Y  +
Sbjct: 550 DKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           ++G    G L  AL+   EM +RG+  ++VC+ +LIDG  K+ D  R   + +++  +  
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY-DQG 668

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+ V Y  MI+   K G F +  E  D M   +   +  TY +F++GLCK G ++ A 
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAG 728

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRG-- 319
            ++ +M+ + I  ++VTY   +D   + G +KE  +L   M +    N  +YNILIRG  
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFC 788

Query: 320 --------------LLEN-------------------GKVDEAISIWELLREKNCNADST 346
                         + EN                   G V  A+ +W+ +  K    DS 
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
              +LI G C NG L+KA ++ N++   G         L  R      K +   CN LM+
Sbjct: 849 AFNLLIYGCCVNGALDKAFELRNDMLSRG---------LKPRQILQLQKRDLGVCNFLMH 899

Query: 407 GFIQASKLENAIFLFKEM 424
           G     +++ A+ L+  M
Sbjct: 900 GGCVTGEVDTALRLYHSM 917



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 47/288 (16%)

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCR 112
           L+L+  +KC+       + +    K    D+A  +F++M        +  +GC    L +
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           +   ++A    + +  KGL  +  +Y  +I G  K G L+ A  V  EM E G+  + + 
Sbjct: 756 EGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCIT 814

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y+ +I    + GD   A E+W+ + +   V P+ V +N++I G C  G  D+  E+ + M
Sbjct: 815 YSTIIYEHCRSGDVGAAVELWDTM-LRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDM 873

Query: 233 KKN--------EREKDSFTYCSFI-HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
                      + +K     C+F+ HG C  G V+ A R+Y  M+               
Sbjct: 874 LSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRA------------ 921

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
                   +K   E+W+      CL ++SY ++ +   E  +V+E+I+
Sbjct: 922 --------VKLSLEMWK------CLYLLSYGVISKS--EELEVNESIT 953


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 254/519 (48%), Gaps = 23/519 (4%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G+   KR  E     L  + E G  PDV+SY  ++ G         AL +   M + G  
Sbjct: 137 GLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDG 196

Query: 168 T---NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           +   NVV Y  +IDG  K     RAK +++ ++ +  V PN  TY  +I+G    G++ E
Sbjct: 197 SHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI-DKGVRPNNHTYTCLIHGYLSIGKWKE 255

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            ++M   M  +  + D + Y   +  LCK G    A  ++  ++  GI  +   Y  ++ 
Sbjct: 256 VVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLH 315

Query: 285 GFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+   G + E     ++M G     +   +NI+     +   +DEA+ I++ +R++  + 
Sbjct: 316 GYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP 375

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+G LI+ LCK                   GR+ DA    N+M   G   + +  +S
Sbjct: 376 NIVTYGALIDALCK------------------LGRVDDAVLKFNQMIDEGMTPDIFVFSS 417

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ G     K E A  LF E+  +G     V +NTL+  LC+  R  EA   +  ML  G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            +PD+I+Y+ L++G C + +ID A KL    +  G  PD   YN L+HG C A +++DA 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L+  M  +   P++VTYNT++ GLF+TG   +A E++  ++  R + +I +YNI + GL
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C  + + +AF+  +    + +     T +I++ A++  G
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGG 636



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 274/557 (49%), Gaps = 33/557 (5%)

Query: 30  REPGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELI--EIQKCYCPEDVALS-VIQAYG 84
           R P +  +P +F +  +L+   + K       +L ++  +    + P  V  + VI    
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 85  KNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K  M D+A  VFQ M        N  + C         ++++  + L  +   GL+PD Y
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            Y  +++ L K+G    A  +FD +  +G++ NV  Y IL+ G+  +G         + L
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD-L 332

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++   V P+   +N+M     K    DE + ++D+M++     +  TY + I  LCK G 
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGR 392

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNI 315
           V+ A   + +M++ G+  D   +++++ G C   K ++  EL+ EV+ +   L+ V +N 
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNT 452

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+  L   G+V EA  + +L+       D  ++  L++G C  G                
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG---------------- 496

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             R+ +AA L++ +   G K +  T N+L++G+ +A ++++A  LF+EM  KG +P VV+
Sbjct: 497 --RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVT 554

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YNT+++GL +  RF EA      M+    + ++ TY+++INGLC++  +D A K+     
Sbjct: 555 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLC 614

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            K    D+   NI+I  L   G+ EDA+ L++ +     VP++ TY  + + L K G  +
Sbjct: 615 SKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 674

Query: 556 KALEIWNHILEERLRPD 572
           +  E+++ + E    P+
Sbjct: 675 ELDELFSAMEENGTAPN 691



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 249/497 (50%), Gaps = 23/497 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN-VVCYNILIDGFFKKGDYMRA 189
           + P  ++Y  +I    + G L    A F  + + G   N  V ++ L+ G         A
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN---EREKDSFTYCS 246
            +I  R + E    P+V +Y++++ G C   R +E LE+   M  +       +  TY +
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCKA  V+ A+ V++ M++ G+  +  TY  +I G+   GK KE  ++ + M   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +   Y +L+  L +NG+  EA +I++ +  K    + T +G+L++G           
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT-------- 319

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     EG L++  S ++ M  +G   + +  N +   + + + ++ A+ +F +M 
Sbjct: 320 ----------EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++  SP +V+Y  LI+ LCK+ R  +A     +M+++G  PD+  +S L+ GLC   K +
Sbjct: 370 QQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWE 429

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L  + L +G   D   +N L+  LC  G+V +A +L   M +    P++++YNTL+
Sbjct: 430 KAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLV 489

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DG   TG  D+A ++ + I+   L+PD ++YN  L G C   R+ DA+    + L +G+ 
Sbjct: 490 DGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLT 549

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T++ ++  +   G
Sbjct: 550 PDVVTYNTILHGLFQTG 566



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 269/563 (47%), Gaps = 31/563 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG---LKPDVYS 137
           D+A D+  R    FGC   +          C +++ E+A   L+ + + G     P+V +
Sbjct: 145 DEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVT 204

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVI+GL K+  +  A  VF  M ++GV  N   Y  LI G+   G +    ++ + + 
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+   Y V+++ LCK GR  E   ++D + +   + +   Y   +HG    G++
Sbjct: 265 TH-GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
                    MV +G+  D   +N M   + +   I E   +++ M ++    N+V+Y  L
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           I  L + G+VD+A+  +  + ++    D      L+ GLC      KA ++  EV + G 
Sbjct: 384 IDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           EGR+ +A  L++ M + G + +  + N+L++G     +++ A  
Sbjct: 444 RLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L   +   G  P  V+YNTL++G CK  R  +AYS  +EML KG  PD++TY+ +++GL 
Sbjct: 504 LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 563

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q+ +   A +L    +      ++  YNI+I+GLC    V++A +++ ++  ++   ++ 
Sbjct: 564 QTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           T N ++  L K G  + A++++  I    L PD+ +Y +  + L     + +  E  +  
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
              G  P +   + LVR +++ G
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRG 706



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 251/561 (44%), Gaps = 31/561 (5%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHL--FHHILRRLIDPKLVVHVSR 59
           V S   LL     EK    AL L      +   +H+P++  +  ++  L   ++V     
Sbjct: 164 VFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKG 223

Query: 60  ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
           + + + I K   P +   + +I  Y       + + + Q M+         I+      L
Sbjct: 224 VFQHM-IDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  +  +A+   +S+  KG+KP+V  YG +++G    G L    +  D M   GV  + 
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI+   + KK     A  I++++  +  + PN+VTY  +I+ LCK GR D+ +  ++
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKM-RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M       D F + S ++GLC     E AE ++ E+++ GI +D V +N ++   CR G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E   L ++M R G   +V+SYN L+ G    G++DEA  + +++       D  T+ 
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
            L++G CK   ++ A  +  E+   G                  GR ++A  L   M   
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
             ++N YT N ++NG  + + ++ A  +F  +  K     + + N +I  L K  R  +A
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 +   G  PD+ TY L+   L +   ++   +L     + G  P+  M N L+  
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 513 LCSAGKVEDALQLYSNMKKRN 533
           L   G +  A    S + ++N
Sbjct: 702 LLHRGDINRAGAYLSKLDEKN 722



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 2/251 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKPD  +Y T+++G  K+  +  A ++F EM  +G+  +V
Sbjct: 493 CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G F+ G +  AKE++  ++  +    N+ TYN++INGLCK    DE  +M+ 
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMI-NSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH 611

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +   + + D FT    I  L K G  E A  ++  +   G+  D  TY  + +   + G
Sbjct: 612 SLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E  EL+  M   G   N    N L+R LL  G ++ A +    L EKN + +++T  
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTS 731

Query: 350 VLINGLCKNGY 360
           +LI+   +  Y
Sbjct: 732 MLISIYSRGEY 742



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 13/272 (4%)

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA---SKLENAIFLFK 422
           +++ +    G   L DA  L + M  H    +    N L+    +A   S  E  + LF 
Sbjct: 19  RVIADRAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFN 78

Query: 423 EMSRKGCS----PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP-DMITYSLLING 477
            M R+ CS    P+  +Y  LI   C++ R    ++    +L+ GW+  D + +S L+ G
Sbjct: 79  RMIRE-CSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKG 137

Query: 478 LCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR---N 533
           LC +K++D A  +  + + + G TPDV  Y+IL+ G C+  + E+AL+L S M      +
Sbjct: 138 LCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGS 197

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+VTY T++DGL K    D+A  ++ H++++ +RP+  +Y   + G  S  +  +  
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV 257

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + L +    G+ P    + +L+  +  NG  T
Sbjct: 258 QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCT 289


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 294/588 (50%), Gaps = 31/588 (5%)

Query: 61   LELIEIQKCYCPEDVALS---VIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI-- 109
            LEL+E  +    +  A S    I  YGK+  P KA+D F+ M +      I  C A +  
Sbjct: 430  LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            L    +  +A+   N L + GL PD  +Y  ++    K+G +  A  +  EM  +G E +
Sbjct: 490  LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V+  N LI+  +K G    A +++ RL     + P VVTYN+++ GL K G+  + LE++
Sbjct: 550  VMIINSLINTLYKAGRVDAAWKMFGRL-KNLKLAPTVVTYNILLTGLGKEGKILKALELF 608

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
              M ++    ++ T+ S +  L K   V+ A +++  M       D +TYN +I G  R 
Sbjct: 609  GSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIRE 668

Query: 290  GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISI-WELLREKNCNADSTTH 348
            G+I   F  +  M +    + V+   LI G++ +G+V++AI +  E + +     +S   
Sbjct: 669  GRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFW 728

Query: 349  GVLINGLCKNGYLNKAIQ-----ILNEVEEGGEGRLA------------DAASLVNRMDK 391
            G L+  +     + +AI      + N V +     L             DA ++ ++  K
Sbjct: 729  GELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTK 788

Query: 392  H-GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            + G      + N LM+G + ++  E A+ LF++M   G  P   +YN L++   K +R  
Sbjct: 789  NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN 848

Query: 451  EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            + Y    EM  +G +P+ IT++++I+ L +S  ++ AL L  + +   F+P    Y  LI
Sbjct: 849  KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908

Query: 511  HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             GL  AG+ E A++++  M    C PN V YN L++G  K+G+ D A E++  +++E +R
Sbjct: 909  DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968

Query: 571  PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            PD+ SY I ++ LC   R+ +A ++  +    G+ P T++++ ++  +
Sbjct: 969  PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 305/637 (47%), Gaps = 41/637 (6%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S + ++ +LK+  +P++A + F   ++   + H+    +++L  L + + +  +  + +
Sbjct: 96  VSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFD 155

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF------ 116
           L++ +  Y      +++ +A        +A    ++M E+     G +     +      
Sbjct: 156 LMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEV-----GFILNAYSYNGLIHL 210

Query: 117 ------EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
                  +A +    +  +G+KP + +Y  ++  L + GD    + + +EM   G+  N+
Sbjct: 211 LLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNI 270

Query: 171 VCYNILIDGFFKKGDYMRAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             Y I I      G   R  + W   + + +    P+V+TY V+I+ LC  G+ D+  E+
Sbjct: 271 YTYTICIRAL---GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + +M+ +    D  TY + +    K G++E  +R + EM   G   D VTY  +I+  C+
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +G +   F++ +VM  KG   N+ +YN +I GLL+  ++DEA+ + E +        + +
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + + I+   K+G   KAI     +++ G                  GR+++A  + N + 
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           K G   ++ T N LM  + +A +++ A  L  EM  KGC P V+  N+LIN L K  R  
Sbjct: 508 KCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVD 567

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A+     +      P ++TY++L+ GL +  KI  AL+L     + G  P+   +N L+
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             L     V+ AL+++  M   NC P+++TYNT++ GL + G  D A   + H +++ L 
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFF-HQMKKFLS 686

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           PD ++    + G+    R+ DA + + + + +  L T
Sbjct: 687 PDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQT 723



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 285/645 (44%), Gaps = 104/645 (16%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG 130
           I+A G+    D A  +F+ M++  GC   +         LC   + +KAK     +    
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDE-GCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS 335

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             PD  +Y T+++   K GDL      ++EM   G   +VV Y ILI+   K GD  RA 
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395

Query: 191 EIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI- 248
           ++ +  VM T  ++PN+ TYN MI GL K  R DE LE+ + M+    +  +F+Y  FI 
Sbjct: 396 DMLD--VMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453

Query: 249 ----------------------------------HGLCKAGNVEGAERVYREMVESGIFV 274
                                             + L + G +  AE ++ ++ + G+  
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           D+VTYN ++  + +AG+I +  +L   M  KGC  +V+  N LI  L + G+VD A  ++
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----- 381
             L+         T+ +L+ GL K G + KA+++   + E G          L D     
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633

Query: 382 -----AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                A  +  RM    C  +  T N+++ G I+  +++ A + F +M +K  SP  V+ 
Sbjct: 634 DAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTL 692

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKG--------WKPDM------------ITYS--LL 474
            TLI G+ +  R  +A   V E + +         W   M            I+++  L+
Sbjct: 693 CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV 752

Query: 475 INGLCQSKKIDMAL-KLCCQ-------------FLQK-GFTPDVTMYNILIHGLCSAGKV 519
            N +CQ   + + L K+ C+             F +  G  P +  YN L+ GL  +   
Sbjct: 753 CNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFT 812

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E AL+L+ +MK     PN  TYN L+D   K+   +K  ++++ +      P+ I++NI 
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +  L   + ++ A +   + +     PT  T+  L+  ++  G S
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 155/630 (24%), Positives = 271/630 (43%), Gaps = 103/630 (16%)

Query: 65   EIQKC-YCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
            ++ KC   P+ V  +++ + Y K    DKA  +   M    GCE  +         L + 
Sbjct: 505  DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK-GCEPDVMIINSLINTLYKA 563

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             + + A +    L    L P V +Y  ++ GL K G +L AL +F  M E G   N + +
Sbjct: 564  GRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF 623

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV---------------------- 211
            N L+D   K      A +++ R+ M  +  P+V+TYN                       
Sbjct: 624  NSLLDCLSKNDAVDLALKMFCRMTM-MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682

Query: 212  ------------MINGLCKCGRFDECL----------------EMWDRMKK--------- 234
                        +I G+ + GR ++ +                + W  + +         
Sbjct: 683  KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIE 742

Query: 235  -----------NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAM 282
                       N   +D       I  LCK      A+ V+ +  ++ GI     +YN +
Sbjct: 743  EAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCL 802

Query: 283  IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
            +DG   +   ++  EL+E M   G   N  +YN+L+    ++ ++++   ++  +R + C
Sbjct: 803  MDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGC 862

Query: 342  NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
              ++ TH ++I+ L K+  LNKA+ +  E+  G                   C     T 
Sbjct: 863  EPNAITHNIIISALVKSNNLNKALDLYYELMSGD-------------FSPTPC-----TY 904

Query: 402  NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
              L++G ++A + E A+ +F+EM   GC P  V YN LING  K      A    K+M++
Sbjct: 905  GPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVK 964

Query: 462  KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            +G +PD+ +Y++L+  LC + +ID A++   +    G  PD   YN +I+GL  + ++++
Sbjct: 965  EGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDE 1024

Query: 522  ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
            AL L+S MK R   P+L TYN L+  L   G  D A++++  +    L P + +YN  ++
Sbjct: 1025 ALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084

Query: 582  GLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            G         AF      +  G  P T T+
Sbjct: 1085 GHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 239/516 (46%), Gaps = 21/516 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           IL  +R+ E      + + +K +  ++ +Y T+   L   G +  A     +M E G   
Sbjct: 140 ILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFIL 199

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   YN LI      G    A ++++R++ E  + P++ TY+ ++  L + G   + + +
Sbjct: 200 NAYSYNGLIH-LLLPGFCNEALKVYKRMISE-GMKPSMKTYSALMVALGRRGDTRKIMNL 257

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + MK      + +TY   I  L +A  ++ A  +++EM + G   D +TY  +ID  C 
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317

Query: 289 AGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AGK+ +  EL+  M       + V+Y  L+    + G ++     W  +       D  T
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +LI  LCK+G +++A  +L+                   M   G   N +T N+++ G
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDV------------------MTTKGIFPNLHTYNTMICG 419

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            ++A +L+ A+ L + M   G  PT  SY   I+   K     +A    + M ++G  P 
Sbjct: 420 LLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +   +  +  L ++ +I  A  +     + G +PD   YN+L+     AG+++ A QL S
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  + C P+++  N+L++ L+K G  D A +++  +   +L P +++YNI L GL    
Sbjct: 540 EMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEG 599

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           ++  A E        G  P TIT++ L+  +  N A
Sbjct: 600 KILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA 635



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 237/530 (44%), Gaps = 68/530 (12%)

Query: 71   CPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKA 119
            CP +     S++    KN   D AL +F RM  +  C   +L          R+ + + A
Sbjct: 616  CPPNTITFNSLLDCLSKNDAVDLALKMFCRMT-MMNCNPDVLTYNTIIYGLIREGRIDYA 674

Query: 120  KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETN--------- 169
              F + + +K L PD  +  T+I G+V+ G +  A+ V  E   +  ++TN         
Sbjct: 675  FWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733

Query: 170  -----------------VVCYNI---------LIDGFFKKGDYMRAKEIWERLVMETSVY 203
                             +VC ++         LI    K+   + A+ ++++      ++
Sbjct: 734  CILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIH 793

Query: 204  PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
            P + +YN +++GL      ++ LE+++ MK      ++FTY   +    K+  +     +
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853

Query: 264  YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLE 322
            Y EM   G   +A+T+N +I    ++  + +  +L+ E+M         +Y  LI GLL+
Sbjct: 854  YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913

Query: 323  NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
             G+ ++A+ I+E + +  C  +S  + +LING  K+G ++ A +                
Sbjct: 914  AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE---------------- 957

Query: 383  ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
              L  +M K G + +  +   L+       +++ A+  F+E+   G  P  VSYN +ING
Sbjct: 958  --LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015

Query: 443  LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            L K  R  EA S   EM  +G  PD+ TY+ LI  L  + K+D+A+K+  +    G  P 
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075

Query: 503  VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            V  YN LI G   +G  + A  ++  M    C PN  T+  L +   + G
Sbjct: 1076 VFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 196/448 (43%), Gaps = 53/448 (11%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N M+  L +  R ++ + ++D M+K    ++  TY +    L   G +  A    R+M E
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 270 SGIFVDAVTYNAMI----DGFC------------------------------RAGKIKEC 295
            G  ++A +YN +I     GFC                              R G  ++ 
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L E M   G   N+ +Y I IR L    ++D+A  I++ + ++ C  D  T+ VLI+ 
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC  G L+KA ++   V+        D  + +  MDK G                +   L
Sbjct: 315 LCAAGKLDKAKELY--VKMRASSHSPDRVTYITLMDKFG----------------KVGDL 356

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E     + EM   G +P VV+Y  LI  LCK      A+  +  M  KG  P++ TY+ +
Sbjct: 357 ETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GL +++++D AL+L       G  P    Y + I     +G    A+  +  MKKR  
Sbjct: 417 ICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGI 476

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           +P++   N  +  L +TG   +A +I+N + +  L PD ++YN+ +K      ++  A +
Sbjct: 477 MPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQ 536

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            L++ + +G  P  +  + L+  +   G
Sbjct: 537 LLSEMISKGCEPDVMIINSLINTLYKAG 564



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 69/284 (24%)

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC-------------KVE 447
           CN ++    +  ++E+ +F+F  M +K     + +Y T+   L              K+ 
Sbjct: 134 CNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMT 193

Query: 448 RFG---EAYSF------------------VKEMLEKGWKPDMITYSLL------------ 474
             G    AYS+                   K M+ +G KP M TYS L            
Sbjct: 194 EVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 475 -----------------------INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                                  I  L ++++ID A  +  +   +G  PDV  Y +LI 
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC+AGK++ A +LY  M+  +  P+ VTY TLMD   K GD +     WN +  +   P
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           D+++Y I ++ LC    +  AF+ L+    +GI P   T++ ++
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 109/227 (48%), Gaps = 11/227 (4%)

Query: 79   VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKRFLNSLWEK 129
            +I    K    ++A+ +F+ M + +GC    +          +  + + A      + ++
Sbjct: 907  LIDGLLKAGRSEQAMKIFEEMLD-YGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G++PD+ SY  ++  L  +G +  A+  F+E+   G++ + V YN +I+G  K      A
Sbjct: 966  GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              ++  +     + P++ TYN +I  L   G+ D  ++M++ ++    E   FTY + I 
Sbjct: 1026 LSLFSEM-KNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            G   +GN + A  V+++M+  G   +  T+  + + + RAG +   F
Sbjct: 1085 GHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 261/552 (47%), Gaps = 61/552 (11%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  Q   A+R   S+    + P+ Y+Y  V+  L   G +  AL+V DEM  RG     
Sbjct: 94  CRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIP 150

Query: 171 VCYNILIDGFFKK---------------------------------------GDYMRAKE 191
             Y+++++    +                                       G    A  
Sbjct: 151 PMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALR 210

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +   L       P+VV+YN ++ GLC   R+    ++ + M +     +  T+ + I  L
Sbjct: 211 LLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYL 270

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           C+ G  E   +V  +MV+ G   D   Y  ++DG C+ G ++   E+ + M   G   NV
Sbjct: 271 CRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNV 330

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V YN +++GL    + ++A  +   + + +C  D  T  +L++  C+NG + + I++L +
Sbjct: 331 VCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQ 390

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           + E                  HGC  +  T  +++NGF +   ++ A+ L K M+  GC 
Sbjct: 391 MLE------------------HGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCR 432

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P  +SY  ++ GLC  ER+ +A   + +M+E+G  P+ +T++ +IN LC+   ++ A++L
Sbjct: 433 PNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             Q L  G +PD+  Y+ +I GL  AGK ++AL+L + M  +   PN + Y+++   L K
Sbjct: 493 LKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSK 552

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  ++ ++++++I +  +R D + YN  +  LC       A EFL   +  G +P   T
Sbjct: 553 EGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNEST 612

Query: 611 WHILVRAVMNNG 622
           + IL+R + + G
Sbjct: 613 YTILIRGLASEG 624



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 246/493 (49%), Gaps = 22/493 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLV-KSGDLLGALAVFDEMFER-GVETNVVCY 173
           F  A R L  L  +G   DV +   V+N +  + G +  AL +  ++    G + +VV Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N ++ G      + R +++ E +V      PNVVT+N +I  LC+ G F+   ++  +M 
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMV-RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV 287

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            +    D   Y + + G+CK G++E A  +   M   G+  + V YN ++ G C A + +
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWE 347

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +  EL   M    C L+ V++NIL+    +NG V   I + E + E  C  D  T+  +I
Sbjct: 348 QAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVI 407

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           NG CK G +++A+ +L                    M   GC+ N  +   ++ G   A 
Sbjct: 408 NGFCKEGLIDEAVMLLKS------------------MAACGCRPNTISYTIVLKGLCSAE 449

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +  +A  L  +M  +GCSP  V++NT+IN LCK     +A   +K+ML  G  PD+I+YS
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYS 509

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            +I+GL ++ K D AL+L    + KG +P+  +Y+ +   L   G++   +Q++ N++  
Sbjct: 510 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               + V YN ++  L K G  D+A+E   +++     P+  +Y I ++GL S   + +A
Sbjct: 570 TIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEA 629

Query: 593 FEFLNDALCRGIL 605
            E L +   +G L
Sbjct: 630 QEMLTELCSKGAL 642



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G LCR   FE+  + L  + + G  PD+  Y TV++G+ K G L  A  + D M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G++ NVVCYN ++ G      + +A+E+   +  +     + VT+N++++  C+ G  
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEM-FDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              +E+ ++M ++    D  TY + I+G CK G ++ A  + + M   G   + ++Y  +
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           + G C A +  +  +L   M  +GC  N V++N +I  L + G V++AI + + +    C
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           + D  ++  +I+GL K G  ++A+++LN               +VN+    G   N    
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLN--------------VMVNK----GMSPNTIIY 543

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           +S+ +   +  ++   I +F  +         V YN +I+ LCK      A  F+  M+ 
Sbjct: 544 SSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVS 603

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
            G  P+  TY++LI GL     +  A ++  +   KG
Sbjct: 604 SGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 25/365 (6%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           +A+I   C AG+  E          +G   VV+YN ++ G    G++  A     L    
Sbjct: 53  SALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASA---RRLAASV 109

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA------------------- 380
               ++ T+  ++  LC  G +  A+ +L+E+   G   +                    
Sbjct: 110 PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGF 169

Query: 381 -DAASLVNRMDKHGCKLNAYTCNSLMNGFI-QASKLENAIFLFKEMSRK-GCSPTVVSYN 437
             A  ++  +   GC L+   CN ++N    Q   ++ A+ L +++    GC P VVSYN
Sbjct: 170 RSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYN 229

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            ++ GLC  +R+G     ++EM+  G  P+++T++ LI  LC++   +   ++  Q +  
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G TPD+ MY  ++ G+C  G +E A ++   M      PN+V YNT++ GL      ++A
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E+   + +     D +++NI +   C    +    E L   L  G +P  IT+  ++  
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409

Query: 618 VMNNG 622
               G
Sbjct: 410 FCKEG 414


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 256/510 (50%), Gaps = 20/510 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ +    +  L+ + +    PDV ++  +IN     G    A+     M   GVE +
Sbjct: 257 FCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPS 316

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +  ++    ++G+ + A+++++  + +  + PN   YN +++G  K     +   ++
Sbjct: 317 VATFTTILHALCREGNVVEARKLFDG-IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLY 375

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+      D  T+   + G  K G +E ++R+ ++++ SG+F+D+  Y+ M+   C A
Sbjct: 376 EEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWA 435

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +L + +  KG  L+VV++N LI      G  D+A   + ++        S+T 
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTC 495

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ GLC+ G+L                   +A  L+ RM + G  +N      L++G+
Sbjct: 496 NSLLMGLCRKGWLQ------------------EARILLYRMLEKGFPINKVAYTVLLDGY 537

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + + LE A FL+KEM  +G  P  V++  LI+GL K     EAY    EM   G+ P+ 
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI GLC   ++  ALKL  +  QKG   D   +NI+I G C  G+++ A++ + +
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++   +P++ T+N L+ G  K  D   A EI N +    L PDI +YN  + G C   +
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRK 717

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           M+ A   L+  +  GI+P T+T++ ++  +
Sbjct: 718 MNQAVIILDQLISAGIVPDTVTYNTMLSGI 747



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 247/494 (50%), Gaps = 22/494 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+    +A++  + + + G+ P+   Y T+++G  K+ ++  A  +++EM   GV  +
Sbjct: 327 LCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPD 386

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +NIL+ G +K G    +  + + L++ + ++ +   Y+VM++ LC  GR DE +++ 
Sbjct: 387 CVTFNILVWGHYKYGRIEDSDRLLKDLIV-SGLFLDSSLYDVMVSSLCWAGRLDEAMKLL 445

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             + +         + S I    +AG  + A   YR MV  G    + T N+++ G CR 
Sbjct: 446 QELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRK 505

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E   L   M  KG  +N V+Y +L+ G  +   ++ A  +W+ ++E+    D+   
Sbjct: 506 GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAF 565

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GL K G + +A ++  E+   G                  GR+ +A  L   M +
Sbjct: 566 TALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQ 625

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   + +T N +++GF +  +++ AI  F +M R G  P + ++N LI G CK      
Sbjct: 626 KGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVG 685

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   V +M   G  PD+ TY+  ++G C+ +K++ A+ +  Q +  G  PD   YN ++ 
Sbjct: 686 AGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLS 745

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLR 570
           G+CS   ++ A+ L + + K   +PN++T N L+    K G  +KAL IW   L E    
Sbjct: 746 GICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL-IWGQKLREISFG 803

Query: 571 PDIISYNITLKGLC 584
            D ISY I  +  C
Sbjct: 804 FDEISYRILDQAYC 817



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 231/508 (45%), Gaps = 22/508 (4%)

Query: 118 KAKRFLNSLWEKG--LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           +  + ++ +W      + D     T++ G +  G    AL V   M   GV   +    I
Sbjct: 158 RTNKIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITI 217

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+    + GDY    ++++ ++ +    P+ +T+N MI G C+  R      +   M K 
Sbjct: 218 LLRLLLRIGDYGSVWKLFKDMIFKGP-RPSNLTFNAMICGFCRQHRVVVGESLLHLMPKF 276

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D  T+   I+  C  G    A      MV SG+     T+  ++   CR G + E 
Sbjct: 277 MCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEA 336

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            +L++ +   G   N   YN L+ G  +  +V +A  ++E +R    + D  T  +L+ G
Sbjct: 337 RKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWG 396

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
             K                   GR+ D+  L+  +   G  L++   + +++    A +L
Sbjct: 397 HYK------------------YGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRL 438

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ L +E+  KG + +VV++N+LI    +     +A+   + M+  G+ P   T + L
Sbjct: 439 DEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSL 498

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           + GLC+   +  A  L  + L+KGF  +   Y +L+ G      +E A  L+  MK+R  
Sbjct: 499 LMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGI 558

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P+ V +  L+DGL K G+ ++A E++  +      P+  +YN  ++GLC C R+++A +
Sbjct: 559 YPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALK 618

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
              +   +G+L  T T++I++      G
Sbjct: 619 LEKEMRQKGLLSDTFTFNIIIDGFCRRG 646



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 196/452 (43%), Gaps = 54/452 (11%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N ++ G    G   E LE+   M+         +    +  L + G+     +++++M+ 
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            G     +T+NAMI GFCR  ++     L  +M +  C  +VV++NILI      G+   
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWV 300

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           AI    L+          T   +++ LC+                  EG + +A  L + 
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCR------------------EGNVVEARKLFDG 342

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           +   G   NA   N+LM+G+ +A ++  A  L++EM   G SP  V++N L+ G  K  R
Sbjct: 343 IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGR 402

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG---------- 498
             ++   +K+++  G   D   Y ++++ LC + ++D A+KL  + L+KG          
Sbjct: 403 IEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNS 462

Query: 499 -------------------------FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
                                    FTP  +  N L+ GLC  G +++A  L   M ++ 
Sbjct: 463 LIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG 522

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N V Y  L+DG FK  + + A  +W  + E  + PD +++   + GL     + +A+
Sbjct: 523 FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           E   +    G +P    ++ L+R + + G  T
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 183/403 (45%), Gaps = 32/403 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           S+I AY +  + DKA + ++ M           C + +  LCRK   ++A+  L  + EK
Sbjct: 462 SLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEK 521

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   +  +Y  +++G  K  +L GA  ++ EM ERG+  + V +  LIDG  K G+   A
Sbjct: 522 GFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEA 581

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E++  +       PN   YN +I GLC CGR  E L++   M++     D+FT+   I 
Sbjct: 582 YEVFLEMS-AIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIID 640

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G C+ G ++ A   + +M   G+  D  T+N +I G+C+A  +    E+   M   G   
Sbjct: 641 GFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDP 700

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++ +YN  + G     K+++A+ I + L       D+ T+  +++G+C +        IL
Sbjct: 701 DITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD--------IL 752

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +            A  L  ++ K G   N  T N L++ F +    E A+   +++    
Sbjct: 753 DR-----------AMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREIS 801

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
                +SY  L    C ++   +    V+   EK    D + Y
Sbjct: 802 FGFDEISYRILDQAYCLMQ---DDVELVRGTYEKHLFMDFLMY 841


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 245/496 (49%), Gaps = 31/496 (6%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  L + GL P   S   V++ L     L  A+A+F E+ ++    NV  +NIL+    
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLKALL 266

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
             G    A + ++    E S  P+VVTY  M++G C  G  +  +++ D M     E ++
Sbjct: 267 SAGRLKDACQHFD----EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y S I  LC  G V  A RV  +M   G+ +DAV +  +I GFC  G +     L+E 
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M ++G   + V++  LI GL   G++ EA  + + + +K  + D  T+ VLI+G CK G 
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           + +A ++ NE              +V R        N  T  +L +G  +   +  A  L
Sbjct: 443 MVEAFRVHNE--------------MVGRR----VAPNVVTYTALSDGLCKQGDVRAANEL 484

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             EM  KG    V +YN+LINGLCK     +A   + EM   G + D+ TY+ LI+ LC+
Sbjct: 485 LHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           S + D A  +  + L KG  P +  YN+L++G C +G+VE   +L   M ++N  PN+VT
Sbjct: 545 SGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVT 604

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN+LM       +     EI+  +  + + P+  +YNI +KG C    M +A  F  + +
Sbjct: 605 YNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI 664

Query: 601 CRGILPTTITWHILVR 616
            +G+  T  ++  L+R
Sbjct: 665 EKGLRLTASSYSALIR 680



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 268/584 (45%), Gaps = 40/584 (6%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
           A + P TA A+   A R P    SPH  H + + +   K         +L+ +  C  P 
Sbjct: 161 AVREPGTARAILVRALRFP----SPHR-HFVEQFIFTYKAFSSDPASFDLLLL--CL-PS 212

Query: 74  DVALSVIQAYGKNSMP------------DKALDVFQRMNEIFGCEAGILCRKR-QFEKAK 120
              L  ++ YG +  P            D+A+ +F+ + +   C   IL +      + K
Sbjct: 213 AELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDKNVCSHNILLKALLSAGRLK 272

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                  E    PDV +YGT+++G    G+L  A+ + DEM  +G+E+N   Y  +I   
Sbjct: 273 DACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALL 332

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
             KG    A  + E + M   V  + V +  +I+G C  G       +++ M+K     D
Sbjct: 333 CNKGQVSDALRVLEDMTMH-GVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW- 299
             T+ + I+GLC+AG ++ A+RV +EMV+ G+ VD VTY  +IDG+C+ G + E F +  
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           E++GR+   NVV+Y  L  GL + G V  A  +   +  K    +  T+  LINGLCK G
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511

Query: 360 YLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCN 402
            L +A++I+ E+E  G                  G    A +++  M   G K +  T N
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYN 571

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            LMNGF  + ++E    L + M  K   P VV+YN+L+   C  +         K M  +
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              P+  TY++LI G C+++ +  AL    + ++KG     + Y+ LI  L    K  +A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
              +  M+          Y+  MD  F   + +  + + + ++E
Sbjct: 692 RVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 36/197 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F++A   L  + +KG+KP + +Y  ++NG   SG + G   + + M E+ V  N
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC---------- 219
           VV YN L+  +    +     EI++ +  +  V PN  TYN++I G CK           
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ-EVAPNENTYNILIKGHCKARNMKEALYFH 660

Query: 220 -------------------------GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                                     +F E    +D+M+      +   Y  ++      
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNE 720

Query: 255 GNVEGAERVYREMVESG 271
            N+E    +  E+VE+ 
Sbjct: 721 DNLESTITLCDELVEAS 737


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 260/535 (48%), Gaps = 28/535 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +    + +        + + +Q+       N +   G+ PDVY+   +
Sbjct: 49  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 108

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN          A +V  ++ + G++ +   +  LI G   +G    A  ++++++ E  
Sbjct: 109 INSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE-G 167

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVTY  +INGLCK G  +  + +   M++   + D   Y S I  LCK   V  A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ +MV  GI  D  TY ++I   C   + K    L  +++  K   +VV ++ ++  L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + GK+ EA  + +++  +    +  T+  L++G C    +++A+++ +           
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT---------- 337

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M  +G   N  + N+L+NG+ +  +++ A +LF+EM +K   P  V+YNTL+
Sbjct: 338 --------MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC V R  +A +   EM+  G  PD+ TY +L++ LC+   +D A+ L          
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +Y I+I G+C AG++E A  ++SN+  +   PN+ TY  +++GL + G  D+A ++
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  +      PD  +YN   +GL        A + L + L RG      T  +LV
Sbjct: 510 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 246/507 (48%), Gaps = 20/507 (3%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A    N +      P    +  ++  + K+       ++ ++M   G+  +V   NI
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+ F        A  +  + +++  + P+  T+  +I GLC  G+  + L ++D+M   
Sbjct: 108 LINSFCHLNRPGFAFSVLAK-ILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +  TY + I+GLCK GN   A R+ R M +     D V Y ++ID  C+  ++ E 
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F L+  M  +G   ++ +Y  LI  L    +     ++   +       D      +++ 
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK                  EG++ +A  +V+ M   G + N  T N+LM+G    S++
Sbjct: 287 LCK------------------EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ +F  M   G +P V+SYNTLING CK++R  +A    +EM +K   P+ +TY+ L
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++GLC   ++  A+ L  + +  G  PD+  Y IL+  LC    +++A+ L   ++  N 
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P++  Y  ++DG+ + G+ + A +I++++  + LRP++ +Y I + GLC    + +A +
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 595 FLNDALCRGILPTTITWHILVRAVMNN 621
              +    G  P   T++ + + ++ N
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQN 535



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 215/436 (49%), Gaps = 19/436 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +   A    + +  +G +P+V +YGT+INGL K G+   A+ +   M +   + +
Sbjct: 147 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 206

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  +ID   K      A  ++ ++V +  + P++ TY  +I+ LC    +     + 
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ-GISPDIFTYTSLIHSLCNLCEWKHVTTLL 265

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M  ++   D   + + +  LCK G +  A  V   M+  G+  + VTYNA++DG C  
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  ++++ M   G   NV+SYN LI G  +  ++D+A  ++E + +K    ++ T+
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             L++GLC  G L  AI + +E+   G+                   L +A +L+  ++ 
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 445

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                +      +++G  +A +LE A  +F  +S KG  P V +Y  +INGLC+     E
Sbjct: 446 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM   G  PD  TY+ +  GL Q+K+   A++L  + L +GF+ DV+   +L+ 
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565

Query: 512 GLCSAGKVEDALQLYS 527
            LC     +   Q+ S
Sbjct: 566 MLCDDKLDQSVKQILS 581



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 207/439 (47%), Gaps = 22/439 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ V +N ++  + K  ++     + ++M       D +T    I+  C       A  V
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             ++++ G+  D  T+  +I G C  GKI +   L++ M  +G   NVV+Y  LI GL +
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD- 381
            G  + AI +   + + NC  D   +  +I+ LCK+  + +A  + +++   G+G   D 
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV--GQGISPDI 242

Query: 382 ------------------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                               +L+N+M       +    +++++   +  K+  A  +   
Sbjct: 243 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 302

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G  P VV+YN L++G C      EA      M+  G+ P++I+Y+ LING C+ ++
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D A  L  +  QK   P+   YN L+HGLC  G+++DA+ L+  M     +P+L TY  
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRI 422

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+D L K    D+A+ +   I    + PDI  Y I + G+C    +  A +  ++   +G
Sbjct: 423 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 482

Query: 604 ILPTTITWHILVRAVMNNG 622
           + P   T+ I++  +   G
Sbjct: 483 LRPNVRTYTIMINGLCRRG 501



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 196/388 (50%), Gaps = 20/388 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ RQ  +A    + +  +G+ PD+++Y ++I+ L    +      + ++M    +  +
Sbjct: 217 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ ++D   K+G    A ++ + +++   V PNVVTYN +++G C     DE ++++
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M  N    +  +Y + I+G CK   ++ A  ++ EM +  +  + VTYN ++ G C  
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++   L+  M   G + ++ +Y IL+  L +   +DEA+++ + +   N + D   +
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I+G+C+ G L  A  I +                   +   G + N  T   ++NG 
Sbjct: 456 TIVIDGMCRAGELEAARDIFSN------------------LSSKGLRPNVRTYTIMINGL 497

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A  LF EM   GCSP   +YNT+  GL + +    A   ++EML +G+  D+
Sbjct: 498 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 557

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            T +LL+  LC  K      ++  +F+Q
Sbjct: 558 STTTLLVEMLCDDKLDQSVKQILSEFVQ 585



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 122/247 (49%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +    N L+    +  +      L  +M   G  P V + N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R G A+S + ++L+ G +PD  T++ LI GLC   KI  AL L  + + +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + PDI +Y   +  LC+          LN  +   I+P  + +  +V A+
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 619 MNNGAST 625
              G  T
Sbjct: 288 CKEGKIT 294



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 45/235 (19%)

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  +S        +++NTL + L    R          ML     P  + ++ L+  + +
Sbjct: 30  FSSLSHNRFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSTVDFNRLLTSIAK 79

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIH----------------------------- 511
           +K+      L  Q    G  PDV   NILI+                             
Sbjct: 80  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTAT 139

Query: 512 ------GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
                 GLC  GK+ DAL L+  M      PN+VTY TL++GL K G+ + A+ +   + 
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 199

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +   +PD++ Y   +  LC   ++++AF   +  + +GI P   T+  L+ ++ N
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 240/465 (51%), Gaps = 21/465 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A     ++ EKG+ P + +  ++++  +K      A  ++ EMF   ++++V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
             +NI+I+   K+G   +AK+      METS V PN+VTYN +++G C  GR +    + 
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGH--METSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MK+ + E DSFTY S I G+CK G +E A +++ EMV+ G+   AV YN +IDGFC  
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 290 GKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +       + M +KG    +S YN LI  L    + DEA  + + ++EK  + D+ T+
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +LING C+     KA  + +E+   G                 + R+ +A  L  ++  
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +A   N+L++G    S ++ A  L K+M R    P  V++NT++ G C+  +  E
Sbjct: 460 EGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM  +G KPD I+++ LI+G  +   I  A ++  + L  GF P V  YN L+ 
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           GLC   + + A +L   M  +   P+  TY TL++G+ K    D+
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 209/413 (50%), Gaps = 20/413 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC++ + +KAK F+  +   G+KP++ +Y T+++G   SG +  A A+   M 
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            + +E +   Y  LI G  K+G    A +I+E +V +  + P+ V YN +I+G C  G  
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV-QKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D      D M K        TY S IH L      + AE + +E+ E GI  DA+TYN +
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+CR    K+ F L + M   G      +Y  L+  L +  ++ EA  +++ +  +  
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D+     LI+G C N  +  A ++L +                  MD+     +  T 
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKD------------------MDRMKVPPDEVTF 504

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++M G  +  K+E A  LF EM R+G  P  +S+NTLI+G  +     +A+    EML+
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            G+ P ++TY+ L+ GLC++++ D+A +L  + + KG TPD T Y  LI G+ 
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 219/452 (48%), Gaps = 20/452 (4%)

Query: 190 KEIWERLVMETSV--YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +EI+E L        + + + ++ +I   C   R DE  E +  MK+        T  S 
Sbjct: 133 REIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSL 192

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +    K    E A  +Y EM    I     T+N MI+  C+ GK+K+  +    M   G 
Sbjct: 193 LSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGV 252

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N+V+YN ++ G   +G+V+ A +I   ++ +    DS T+G LI+G+CK G L +A +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I  E+ + G                 +G L  A++  + M K G      T NSL++   
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              + + A  + KE+  KG SP  ++YN LING C+     +A+    EML  G KP   
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ L++ L +  ++  A  L  +   +G  PD  M+N LI G CS   V+ A +L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    P+ VT+NT+M G  + G  ++A E+++ +    ++PD IS+N  + G      +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DAF   N+ L  G  PT +T++ LV+ +  N
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 221/454 (48%), Gaps = 20/454 (4%)

Query: 185 DYMRAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           D  RA E +E    + E  V P + T N +++   K  R +    ++  M +   +   +
Sbjct: 163 DMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVY 222

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I+ LCK G ++ A+     M  SG+  + VTYN ++ G+C +G+++    +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            R+    +  +Y  LI G+ + G+++EA  I+E + +K     +  +  LI+G C  G L
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + A    +E+ + G                 E R  +A  ++  + + G   +A T N L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG+ + +  + A  L  EM   G  PT  +Y +L++ L K  R  EA    K++  +G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD I ++ LI+G C +  +  A +L     +    PD   +N ++ G C  GKVE+A +
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+  MK+R   P+ +++NTL+ G  + GD   A  + N +L+    P +++YN  ++GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
                  A E L + + +G+ P   T+  L+  +
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%)

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I +  LI   C   + D A +      +KG  P +   N L+       + E A  LY+ 
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +     ++ T+N +++ L K G   KA +   H+    ++P+I++YN  + G CS  R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A   L     + I P + T+  L+  +   G
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG 305


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 273/555 (49%), Gaps = 22/555 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------LC-- 111
           L LIE +  + P  +  + +I    + S  ++A+D   RM     C   +      LC  
Sbjct: 296 LSLIEKED-FVPNTILYNKMISGLCEASFFEEAMDFLNRMRST-SCIPNVQTYRILLCGC 353

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR L+ +  +G  P    + ++++   KS D   A  +  +M +   +   
Sbjct: 354 LNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413

Query: 171 VCYNILIDGFFKKGD------YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           V YNILI      G+      +  A++ +  ++   +V  N V        LC  G+F++
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL-NKVNVVSFARCLCGFGKFEK 472

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++   M  N    D+ TY   I  LC A  VE A  +++EM  +G+  D  TY  +ID
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            F +AG IK+     + M R GC   VV+Y  LI   L+  KV  A  ++EL+  K C  
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI+G CK+G + KA QI   +   G+  + D        +    K N  T  +
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMR--GDADIPDVDMYFKIKNNVAEKPNVVTYGA 650

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +A K+++A  L + M   GC P  + Y+ LI+G CK  +  EA     +M+E G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + P++ TYS LI+ L + K++D+ LK+  + L+    P++ +Y  +I GL    K ++A 
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG  K G  DK LE++  +  +   P+ ++Y + +   
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 584 CSCSRMSDAFEFLND 598
           C+   + +A+  L +
Sbjct: 831 CATGHLDEAYALLEE 845



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 269/627 (42%), Gaps = 92/627 (14%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------------NEIFG-- 104
           RIL ++  + CY    +  S++ AY K+     A  + ++M            N + G  
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGL---KPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           C  G L     FE A++  N +   G    K +V S+   + G    G    A  V  EM
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEM 480

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
              G   +   Y+ +I GF      +       + +  T V P+V TY ++I+   K G 
Sbjct: 481 MGNGFVPDTSTYSEVI-GFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             +     D M ++  E    TY + IH   KA  V  A  ++  M+  G F + +TY A
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-----------------NVVSYNILIRGLLENG 324
           +IDG+C++G I++  +++  M     +                 NVV+Y  L+ GL +  
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           KV +A  + E +    C  ++  +  LI+G CK   L++A ++ +               
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH--------------- 704

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
              +M +HG   N YT +SL++   +  +L+  + +  +M    C+P +V Y  +I+GL 
Sbjct: 705 ---KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           KV +  EAY  +  M EKG KP+++TY+ +I+G  ++ K+D  L+L  +   KG  P+  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMK---------------------------------K 531
            Y +LI+  C+ G +++A  L   MK                                 K
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS--YNITLKGLCSCSRM 589
               P ++ Y  L+D   K G  + ALE+   ++   +        Y   +      S++
Sbjct: 882 NGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKI 941

Query: 590 SDAFEFLNDALCRGILPTTITW-HILV 615
             AFE   D +  G++P   T+ H+L+
Sbjct: 942 GHAFELFYDMIRDGVIPDLGTFVHLLM 968



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 224/509 (44%), Gaps = 106/509 (20%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC   + E A      +   G+ PDVY+Y  +I+   K+G +  A    DEM   G E
Sbjct: 497 GFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCE 556

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             VV Y  LI  + K      A E++E L++    +PNV+TY  +I+G CK G  ++  +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615

Query: 228 MWDRM---------------KKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++ RM               K N  EK +  TY + + GLCKA  V+ A  +   M   G
Sbjct: 616 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              + + Y+A+IDGFC+A K+ E  E++  M   G   NV +Y+ LI  L ++ ++D  +
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 735

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   + E +C  +   +  +I+GL K    ++A +++  +EE                 
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE----------------- 778

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN--------- 441
             GCK N  T  ++++GF +A K++  + LF+EM  KGC+P  V+Y  LIN         
Sbjct: 779 -KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 442 -------------------GLCKV-----ERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                                CKV       F  +   ++E+ + G  P ++ Y +LI+ 
Sbjct: 838 EAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDN 897

Query: 478 LCQSKKIDMALKLCCQ-------------------------------------FLQKGFT 500
             ++ ++++AL+L  +                                      ++ G  
Sbjct: 898 FVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVI 957

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           PD+  +  L+ GL    + E+ALQL  ++
Sbjct: 958 PDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 152/618 (24%), Positives = 262/618 (42%), Gaps = 55/618 (8%)

Query: 25  FDSATREPGYAHSPHLFHHI------LRRLIDP--KLVVHVSRILELIEIQKCYCPEDVA 76
           F S+   P Y+HS    H        L  L+DP   L    SR+       +C+ P++V+
Sbjct: 26  FFSSNPFPIYSHSSPFAHFSTSSPDDLPGLVDPDQSLSSDTSRV-------QCFSPQEVS 78

Query: 77  L---SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           L   S++ ++  +    + L   +  NE F     +      F +    +   + + L P
Sbjct: 79  LLRDSLLDSHADSCSSHRTLQTVKISNEAFLILDAVRNCDDGFGEKTHIVLRQFRQKLNP 138

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D+      I   +KS +L     ++    + G +     Y  L+D  F++G Y R  E +
Sbjct: 139 DLV---VEILSFLKSPELCVKFFLWAGR-QIGYDHTPAVYIALLD-VFERGSYDRVPEEF 193

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            R +            NV+I   C+ G ++  LE   R+K    +    TY + +    +
Sbjct: 194 LREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLR 253

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSY 313
           A  ++ A+ V+REM E G+ +D  T        C+ GK +E   L E        N + Y
Sbjct: 254 ADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE--KEDFVPNTILY 311

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I GL E    +EA+     +R  +C  +  T+ +L   LC  G LNK          
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRIL---LC--GCLNKK--------- 357

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               +L     +++ M   GC  +    NSL++ + ++     A  L K+M +  C P  
Sbjct: 358 ----QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING---------LCQSKKI 484
           V YN LI  +C         +F  E+ EK +  +M++   ++N          LC   K 
Sbjct: 414 VVYNILIGSICSGGELPGPVTF--ELAEKAYN-EMLSAGTVLNKVNVVSFARCLCGFGKF 470

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           + A K+  + +  GF PD + Y+ +I  LC+A +VE+A  L+  MK    VP++ TY  L
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D   K G   +A    + ++ +   P +++Y   +       ++S A E     + +G 
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 605 LPTTITWHILVRAVMNNG 622
            P  IT+  L+     +G
Sbjct: 591 FPNVITYTALIDGYCKSG 608


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 252/502 (50%), Gaps = 27/502 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  VF+  +E+  C   +        LC+  + ++A   L  +  +G  PDV SY  +++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G  +   L   L + +E+  +G++ N   YN +I    K G  + A+++  R++    ++
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL-RVMKNQRIF 354

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ V Y  +I+G  K G      +++D MK+ +   D  TY S IHGLC+AG V  A ++
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           + EM+  G+  D VTY A+IDG+C+AG++KE F L   M  KG   NVV+Y  L+ GL +
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G+VD A  +   + EK    +  T+  LINGLCK G + +A++++ E++  G       
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G +A A  L+  M   G +    T N LMNGF  +  LE+   L K M 
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG  P   ++N+L+   C            K M  +G  PD  TY++LI G C+++ + 
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L  + ++KGF+     YN LI G     K E+A +L+  M+    +     Y+  +
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714

Query: 546 DGLFKTGDCDKALEIWNHILEE 567
           D  ++ G+ +  LE+ +  +E+
Sbjct: 715 DVNYEEGNWENTLELCDEAIEK 736



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 261/514 (50%), Gaps = 27/514 (5%)

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD-LLGALAVFDEMFER 164
           EAG+L       +A +  + L   G+   V S    +  L  S D +  A  VF E  E 
Sbjct: 193 EAGLLL------EAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEV 246

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           GV  N V YNI++    + G    A  +  ++    +V P+VV+Y+V+++G C+  +  +
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV-PDVVSYSVIVDGYCQVEQLGK 305

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L++ + +++   + + +TY S I  LCK G V  AE+V R M    IF D V Y  +I 
Sbjct: 306 VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLIS 365

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           GF ++G +   ++L++ M RK  + + V+Y  +I GL + GKV EA  ++  +  K    
Sbjct: 366 GFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKP 425

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           D  T+  LI+G CK                   G + +A SL N+M + G   N  T  +
Sbjct: 426 DEVTYTALIDGYCK------------------AGEMKEAFSLHNQMVEKGLTPNVVTYTA 467

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +  +++ A  L  EMS KG  P V +YN LINGLCKV    +A   ++EM   G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           + PD ITY+ +++  C+  ++  A +L    L KG  P +  +N+L++G C +G +ED  
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M  +  +PN  T+N+LM       +    +EI+  +  + + PD  +YNI +KG 
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           C    M +A+    + + +G   T  +++ L++ 
Sbjct: 648 CKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 247/510 (48%), Gaps = 58/510 (11%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            +R + +  + G  P V+        LV++G LL A  +FD++   GV  +V   N+ + 
Sbjct: 167 TERLIYTYKDWGAHPLVFD--VFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLA 224

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
                 D +R      R   E  V  N V+YN+++                         
Sbjct: 225 RLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIIL------------------------- 259

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
                     H LC+ G V+ A  +  +M   G   D V+Y+ ++DG+C+  ++ +  +L
Sbjct: 260 ----------HLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKL 309

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            E + RKG   N  +YN +I  L + G+V EA  +  +++ +    D+  +  LI+G  K
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           +G ++   ++ +E                  M +     +  T  S+++G  QA K+  A
Sbjct: 370 SGNVSVEYKLFDE------------------MKRKKIVPDFVTYTSMIHGLCQAGKVVEA 411

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LF EM  KG  P  V+Y  LI+G CK     EA+S   +M+EKG  P+++TY+ L++G
Sbjct: 412 RKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDG 471

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC+  ++D+A +L  +  +KG  P+V  YN LI+GLC  G +E A++L   M      P+
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            +TY T+MD   K G+  KA E+   +L++ L+P I+++N+ + G C    + D    + 
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591

Query: 598 DALCRGILPTTITWHILVRA--VMNNGAST 625
             L +GI+P   T++ L++   + NN  +T
Sbjct: 592 WMLDKGIMPNATTFNSLMKQYCIRNNMRAT 621


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 311/653 (47%), Gaps = 47/653 (7%)

Query: 2    VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            V++   L+N L      + A  L D+  R+ G   + H ++ ++  L+       +   L
Sbjct: 369  VVTFTILVNALCKAGRINEAFDLLDT-MRKQGVLPNLHTYNTLISGLLRAN---RLDDAL 424

Query: 62   ELIEIQKCYCPEDVALS---VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--L 110
            +L    +    E  A +   +I  +GK+  P KAL+ F++M        I  C A +  L
Sbjct: 425  DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSL 484

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
                +  +AK   N L   GL PD  +Y  ++    K G +  A+ +  EM +   E +V
Sbjct: 485  AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +  N LID  +K G   R +E W+    + E ++ P VVTYN+++ GL K G+  + +++
Sbjct: 545  IVINSLIDTLYKAG---RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 229  WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            ++ M  +    ++ T+ + +  LCK   V+ A +++ +M       D +T+N +I GF +
Sbjct: 602  FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 289  AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI----------------SI 332
              +IK    L+  M +    + V+   L+ G++++G++++A                 S 
Sbjct: 662  QNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721

Query: 333  WELLREKNCNADSTTHGVLIN------GLCKN-GYLNKAIQILNEVEEGGEGRLADAASL 385
            WE +         T   +L         +CK+   L   I++L + ++    R       
Sbjct: 722  WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVAR----NVF 777

Query: 386  VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            V    + G K      N L++GF++   +E A  LF+EM   GC+P   +YN+LI+   K
Sbjct: 778  VKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGK 837

Query: 446  VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
              +  E +    EML +G KP+ ITY+++I+ L +S ++D A+ L    +   F+P    
Sbjct: 838  SGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897

Query: 506  YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            +  LI GL  +G+++DA +++  M    C PN   YN L++G  K G  D A E +  ++
Sbjct: 898  FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957

Query: 566  EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +E +RPD+ SY I +  LC   R+ DA  +       G+ P  + +++++  +
Sbjct: 958  KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 234/454 (51%), Gaps = 23/454 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L R  + ++A R +  + + G  PDV +Y  +I+ L  +  L  A+ +F +M     + 
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLE 227
           + V Y  L+D F   G   + ++IW    ME   Y P+VVT+ +++N LCK GR +E  +
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTE--MEADGYAPDVVTFTILVNALCKAGRINEAFD 390

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M+K     +  TY + I GL +A  ++ A  ++  M   G+   A TY  +ID   
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450

Query: 288 RAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           ++G   +  E +E M  +G   N+V+ N  +  L E G++ EA +++  L+      DS 
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +++    K G +++AI++L+E                  M K  C+ +    NSL++
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSE------------------MSKVQCEPDVIVINSLID 552

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +A ++E A  +F  M     +PTVV+YN L+ GL K  +  +A    + M   G  P
Sbjct: 553 TLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSP 612

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + IT++ L++ LC++ ++D+ALK+  +       PDV  +N +IHG     ++++A+ L+
Sbjct: 613 NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
             MKK    P+ VT  TL+ G+ K+G  + A  I
Sbjct: 673 HQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRI 705



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/677 (24%), Positives = 309/677 (45%), Gaps = 87/677 (12%)

Query: 12   LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC-- 69
            L  E   +T + L D   +      +   F  +  R I P +V   + +  L E+ +   
Sbjct: 433  LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492

Query: 70   ------------YCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI------- 109
                          P+ V  +++ + Y K    D+A+ +   M+++  CE  +       
Sbjct: 493  AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV-QCEPDVIVINSLI 551

Query: 110  --LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
              L +  + E+A +    + E  L P V +Y  ++ GL K G +  A+ +F+ M   G  
Sbjct: 552  DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             N + +N L+D   K  +   A +++ ++    +  P+V+T+N +I+G  K  +    + 
Sbjct: 612  PNTITFNTLLDCLCKNDEVDLALKMFYKMT-TMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA---------------ERVYREMVESGI 272
            ++ +MKK  R  D  T C+ + G+ K+G +E A               +R + E V  GI
Sbjct: 671  LFHQMKKLLR-PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGI 729

Query: 273  FVDAVTYNAMIDG---FCRA---------------------GKIKECF-ELWEVMGRKGC 307
              +A T  A++ G    CRA                        +  F +  + +G K  
Sbjct: 730  LTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPT 789

Query: 308  LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            L V  YN+LI G LE   V+ A +++E ++   C  D+ T+  LI+   K+G +N+   +
Sbjct: 790  LKV--YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847

Query: 368  LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
             +E                  M   GCK N  T N +++  +++++L+ A+ L+  +   
Sbjct: 848  YDE------------------MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889

Query: 428  GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              SPT  ++  LI+GL K  R  +A+     M+  G +P+   Y++L+NG  +   +D A
Sbjct: 890  DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTA 949

Query: 488  LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +   + +++G  PD+  Y IL+  LC AG+V+DAL  +  +K+    P+LV YN +++G
Sbjct: 950  CEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING 1009

Query: 548  LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
            L ++   ++AL +++ +    + PD+ +YN  +  L     + +A +   +    G+ P 
Sbjct: 1010 LGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPN 1069

Query: 608  TITWHILVRAVMNNGAS 624
              T++ L+R    +G S
Sbjct: 1070 VFTYNALIRGYTLSGNS 1086



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 19/483 (3%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           VFD M  + +  NV  Y I+    F +G   +A    E++  E     N  +YN +I+ L
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM-REAGFVLNAYSYNGLIHFL 204

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            + G   E LE++ RM     +    T+ + +    K  N++    +  EM   G+  + 
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNI 264

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
            TY   I    R GKI E + + + M   GC  +VV+Y +LI  L    K+D+A+ ++  
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           ++  +   D  T+  L++     G+L+K  +I  E+E  G                  GR
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A  L++ M K G   N +T N+L++G ++A++L++A+ LF  M   G  PT  +Y  
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+   K    G+A    ++M  +G  P+++  +  +  L +  ++  A  +  +    G
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD   YN+++      G+V++A++L S M K  C P+++  N+L+D L+K G  ++A 
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +++  + E  L P +++YNI L GL    ++  A +        G  P TIT++ L+  +
Sbjct: 565 QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624

Query: 619 MNN 621
             N
Sbjct: 625 CKN 627



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 247/540 (45%), Gaps = 60/540 (11%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
             +K ++    +   G  PDV ++  ++N L K+G +  A  + D M ++GV  N+  YN
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            LI G  +      A +++    ME+  V P   TY ++I+   K G   + LE +++MK
Sbjct: 409 TLISGLLRANRLDDALDLFSN--MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMK 466

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 +     + ++ L + G +  A+ ++ E+  SG+  D+VTYN M+  + + G++ 
Sbjct: 467 ARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVD 526

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  +L   M +  C  +V+  N LI  L + G+V+EA  ++  + E N      T+ +L+
Sbjct: 527 EAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILL 586

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            GL K G + KA+Q                  L   M+ HGC  N  T N+L++   +  
Sbjct: 587 AGLGKEGQIQKAVQ------------------LFESMNGHGCSPNTITFNTLLDCLCKND 628

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +++ A+ +F +M+   C P V+++NT+I+G  K  +   A     +M +K  +PD +T  
Sbjct: 629 EVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLC 687

Query: 473 LLINGLCQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM-- 529
            L+ G+ +S +I+ A ++   F  Q G   D + +  ++ G+ +    E A+     +  
Sbjct: 688 TLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVC 747

Query: 530 ----------------------------------KKRNCVPNLVTYNTLMDGLFKTGDCD 555
                                             K+    P L  YN L+DG  +  + +
Sbjct: 748 RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A  ++  +      PD  +YN  +       ++++ F+  ++ L RG  P TIT+++++
Sbjct: 808 VAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVI 867



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 232/488 (47%), Gaps = 30/488 (6%)

Query: 85   KNSMPDKALDVFQRMNEIFGCEAGILCRK---RQFEKAKRFLNSLW-----EKGLKPDVY 136
            KN   D AL +F +M  +  C   +L        F K  +  N++W     +K L+PD  
Sbjct: 626  KNDEVDLALKMFYKMTTM-NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHV 684

Query: 137  SYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +  T++ G++KSG +  A  + ++ F + G   +   +  ++ G   +    +A    ER
Sbjct: 685  TLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGER 744

Query: 196  LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF-TYCSFIHGLCKA 254
            LV       + V   + I  LCK  +      ++ +  K    K +   Y   I G  + 
Sbjct: 745  LVCRAICKDDSVLIPI-IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEV 803

Query: 255  GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             NVE A  ++ EM  +G   D  TYN++ID   ++GKI E F+L++ M  +GC  N ++Y
Sbjct: 804  HNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITY 863

Query: 314  NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            N++I  L+++ ++D+A+ ++  L   + +    T G LI+GL K+G L+ A ++ + +  
Sbjct: 864  NMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH 923

Query: 374  -----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                             G  G +  A     RM K G + +  +   L++    A ++++
Sbjct: 924  YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDD 983

Query: 417  AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
            A+  F+++ + G  P +V+YN +INGL + +R  EA S   EM  +G  PD+ TY+ LI 
Sbjct: 984  ALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLIL 1043

Query: 477  GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             L     I+ A K+  +    G  P+V  YN LI G   +G  E A  +Y  M    C P
Sbjct: 1044 NLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDP 1103

Query: 537  NLVTYNTL 544
            N  T+  L
Sbjct: 1104 NTGTFAQL 1111



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 178/378 (47%), Gaps = 18/378 (4%)

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           VE    V+  M    I  +  TY  +       G +++     E M   G  LN  SYN 
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNG 199

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-- 373
           LI  LL++G   EA+ ++  +  +       T   L+    K   +   + +L E+E   
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 374 ---------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                          G +G++ +A  ++ RMD  GC  +  T   L++    A KL++A+
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF +M      P  V+Y TL++         +      EM   G+ PD++T+++L+N L
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++ +I+ A  L     ++G  P++  YN LI GL  A +++DAL L+SNM+     P  
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            TY  L+D   K+G   KALE +  +    + P+I++ N +L  L    R+ +A    N+
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499

Query: 599 ALCRGILPTTITWHILVR 616
               G+ P ++T++++++
Sbjct: 500 LKSSGLAPDSVTYNMMMK 517



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 178/370 (48%), Gaps = 21/370 (5%)

Query: 109  ILCRKRQFEKAKR-FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +LC+ ++   A+  F+    E G+KP +  Y  +I+G ++  ++  A  +F+EM   G  
Sbjct: 763  VLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCA 822

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             +   YN LID   K G      ++++ ++      PN +TYN++I+ L K  R D+ ++
Sbjct: 823  PDTFTYNSLIDAHGKSGKINELFDLYDEMLTR-GCKPNTITYNMVISNLVKSNRLDKAMD 881

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            ++  +   +      T+   I GL K+G ++ A  ++  MV  G   ++  YN +++G+ 
Sbjct: 882  LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            + G +    E ++ M ++G   ++ SY IL+  L   G+VD+A+  +E L++   + D  
Sbjct: 942  KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             + ++INGL                  G   R  +A SL + M   G   + YT NSL+ 
Sbjct: 1002 AYNLMINGL------------------GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLIL 1043

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
                   +E A  +++E+   G  P V +YN LI G         AY   K+M+  G  P
Sbjct: 1044 NLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDP 1103

Query: 467  DMITYSLLIN 476
            +  T++ L N
Sbjct: 1104 NTGTFAQLPN 1113



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 35/277 (12%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           R+ D A + + M +   + N  T   +         L  A    ++M   G      SYN
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI+ L +     EA    + M+ +G KP + T+S L+    + + I   + L  +    
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG---------- 547
           G  P++  Y I I  L   GK+++A ++   M    C P++VTY  L+D           
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDA 318

Query: 548 ----------------------LFKTGDC---DKALEIWNHILEERLRPDIISYNITLKG 582
                                 L K  DC   DK  +IW  +  +   PD++++ I +  
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNA 378

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           LC   R+++AF+ L+    +G+LP   T++ L+  ++
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL 415



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 97/216 (44%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TCN ++       ++E+  F+F  M R+     V +Y  +   L       +A S +++M
Sbjct: 126 TCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM 185

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            E G+  +  +Y+ LI+ L QS     AL++  + + +G  P +  ++ L+        +
Sbjct: 186 REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNI 245

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           +  + L   M+     PN+ TY   +  L + G  D+A  I   + ++   PD+++Y + 
Sbjct: 246 KTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVL 305

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  LC+  ++ DA             P  +T+  L+
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 256/526 (48%), Gaps = 37/526 (7%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R ++ A+R    +   G+ P+VY+Y  +I G+V  GDL   L    +M + G+  NVV Y
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N LID   KK     A  +  R +    V  N+++YN +INGLC  GR  E  E+ + M+
Sbjct: 246 NTLIDASCKKKKVKEAMALL-RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D  TY + ++G CK GN+     +  EMV  G+  + VTY  +I+  C+AG + 
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
              E+++ M  +G   N  +Y  LI G  + G ++EA  +   +     +    T+  L+
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +G C   +L               GR+ +A  ++  M + G   +  + ++++ GF +  
Sbjct: 425 HGYC---FL---------------GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +L  A  + +EM  KG  P  V+Y++LI GLC  ++  EA+   +EM+ +G  PD +TY+
Sbjct: 467 ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYT 526

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LIN  C   ++  AL+L  + +Q+GF PD   Y++LI+GL    + + A +L   +   
Sbjct: 527 SLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYE 586

Query: 533 NCVPNLVTYNTLM-----------DGLFKTGDCDKAL-----EIWNHILEERLRPDIISY 576
             VP+ VTYNTL+           +GL K G C K L      ++  +L+   +P+   Y
Sbjct: 587 ESVPDDVTYNTLIENCSNNEFKSVEGLVK-GFCMKGLMNEADRVFKTMLQRNHKPNAAIY 645

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           N+ + G      +  A+    +         T+    LV+A+   G
Sbjct: 646 NLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 250/496 (50%), Gaps = 29/496 (5%)

Query: 136 YSYGTVINGLVKSGDLLG----ALAVFDEMFERGVETNVVCYNILIDGFFKKG-----DY 186
           +S   V + +VKS   LG    AL +       G    V+ YN ++D   ++      DY
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A+ ++  +V    V PNV TYNV+I G+   G  ++ L    +M+K     +  TY +
Sbjct: 189 DDAERVFRDMV-RNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I   CK   V+ A  + R M   G+  + ++YN++I+G C  G++ E  EL E M  KG
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            + + V+YN L+ G  + G + + + +   +  K  + +  T+  LIN +CK G L++A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           +I ++                  M   G + N  T  +L++GF Q   +  A  +  EM 
Sbjct: 368 EIFDQ------------------MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G SP+VV+YN L++G C + R  EA   ++ M+E+G  PD+++YS +I G C+ +++ 
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A ++  + ++KG  PD   Y+ LI GLC   K+ +A  L+  M +R   P+ VTY +L+
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +     G+  KAL + + +++    PD ++Y++ + GL   +R   A   L        +
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 606 PTTITWHILVRAVMNN 621
           P  +T++ L+    NN
Sbjct: 590 PDDVTYNTLIENCSNN 605



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 218/424 (51%), Gaps = 24/424 (5%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG---- 255
           +S + +   +++++  L + G   + L +     ++       +Y + +  L +      
Sbjct: 126 SSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNH 185

Query: 256 -NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
            + + AERV+R+MV +G+  +  TYN +I G    G +++       M ++G   NVV+Y
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI    +  KV EA+++   +      A+  ++  +INGLC                 
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC----------------- 288

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G+GR+++   LV  M   G   +  T N+L+NGF +   L   + L  EM  KG SP V
Sbjct: 289 -GKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNV 347

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y TLIN +CK      A     +M  +G +P+  TY+ LI+G CQ   ++ A K+  +
Sbjct: 348 VTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE 407

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  GF+P V  YN L+HG C  G+V++A+ +   M +R   P++V+Y+T++ G  +  +
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERE 467

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             KA ++   ++E+ + PD ++Y+  ++GLC   ++ +AF+   + + RG+ P  +T+  
Sbjct: 468 LGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTS 527

Query: 614 LVRA 617
           L+ A
Sbjct: 528 LINA 531



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 228/471 (48%), Gaps = 35/471 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K++ ++A   L ++   G+  ++ SY +VINGL   G +     + +EM  +G+  + 
Sbjct: 253 CKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDE 312

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN L++GF K+G+  +   +   +V +  + PNVVTY  +IN +CK G     +E++D
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGK-GLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  TY + I G C+ G +  A +V  EM+ SG     VTYNA++ G+C  G
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +++E   +   M  +G   +VVSY+ +I G     ++ +A  + E + EK    D+ T+ 
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI GLC                   + +L +A  L   M + G   +  T  SL+N + 
Sbjct: 492 SLIQGLCL------------------QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              +L  A+ L  EM ++G  P  V+Y+ LINGL K  R   A   + ++  +   PD +
Sbjct: 534 VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV 593

Query: 470 TYSLLI---------------NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           TY+ LI                G C    ++ A ++    LQ+   P+  +YN++IHG  
Sbjct: 594 TYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHS 653

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
             G V  A  LY  ++  +   + V    L+  L + G  D+   +  +IL
Sbjct: 654 RGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL 704



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 224/479 (46%), Gaps = 35/479 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K +  +    +  +  KGL PD  +Y T++NG  K G+L   L +  EM  +G+  N
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPN 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+   K G+  RA EI++++ +   + PN  TY  +I+G C+ G  +E  ++ 
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVR-GLRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  +       TY + +HG C  G V+ A  + R MVE G+  D V+Y+ +I GFCR 
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ + F++ E M  KG L + V+Y+ LI+GL    K+ EA  ++  +  +    D  T+
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LIN  C +G L+KA+++ +E                  M + G   +  T + L+NG 
Sbjct: 526 TSLINAYCVDGELSKALRLHDE------------------MVQRGFLPDNVTYSVLINGL 567

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLI---------------NGLCKVERFGEAY 453
            + ++ + A  L  ++  +   P  V+YNTLI                G C      EA 
Sbjct: 568 NKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEAD 627

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              K ML++  KP+   Y+L+I+G  +   +  A  L  +     F         L+  L
Sbjct: 628 RVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKAL 687

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
              G  ++  +L  N+ +   + +      L++  FK G+ D  L +   + ++ L PD
Sbjct: 688 AREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 175/627 (27%), Positives = 309/627 (49%), Gaps = 29/627 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            IS   + +L   + +P TAL      ++ P Y HS + +  +L  LI+   V  V +I 
Sbjct: 87  AISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI- 145

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF---EK 118
            L+ I+ C    D AL V+    K +  D+  ++  ++  I GC   +L    +F   ++
Sbjct: 146 RLLMIKSCDSVGD-ALYVLDLCRKMN-KDERFELKYKL--IIGCYNTLLNSLARFGLVDE 201

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            K+    + E  + P++Y+Y  ++NG  K G++  A     ++ E G++ +   Y  LI 
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G+ ++ D   A +++  + ++     N V Y  +I+GLC   R DE ++++ +MK +E  
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
               TY   I  LC +     A  + +EM E+GI  +  TY  +ID  C   K ++  EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M  KG + NV++YN LI G  + G +++A+ + EL+  +  + ++ T+  LI G CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           +  ++KA+ +LN++ E     L D                  T NSL++G  ++   ++A
Sbjct: 441 SN-VHKAMGVLNKMLE--RKVLPDVV----------------TYNSLIDGQCRSGNFDSA 481

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L   M+ +G  P   +Y ++I+ LCK +R  EA      + +KG  P+++ Y+ LI+G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C++ K+D A  +  + L K   P+   +N LIHGLC+ GK+++A  L   M K    P 
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + T   L+  L K GD D A   +  +L    +PD  +Y   ++  C   R+ DA + + 
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661

Query: 598 DALCRGILPTTITWHILVRAVMNNGAS 624
                G+ P   T+  L++   + G +
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQT 688



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 269/568 (47%), Gaps = 52/568 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  Y +    D A  VF  M  + GC             LC  R+ ++A      + +
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEM-PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
               P V +Y  +I  L  S     AL +  EM E G++ N+  Y +LID    +  + +
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+E+  ++ +E  + PNV+TYN +ING CK G  ++ +++ + M+  +   ++ TY   I
Sbjct: 377 ARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            G CK+ NV  A  V  +M+E  +  D VTYN++IDG CR+G     + L  +M  +G +
Sbjct: 436 KGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +  +Y  +I  L ++ +V+EA  +++ L +K  N +   +  LI+G CK          
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK---------- 544

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                    G++ +A  ++ +M    C  N+ T N+L++G     KL+ A  L ++M + 
Sbjct: 545 --------AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  PTV +   LI+ L K   F  AYS  ++ML  G KPD  TY+  I   C+  ++  A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +  +  + G +PD+  Y+ LI G    G+   A  +   M+   C P+  T+ +L+  
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716

Query: 548 LFKTG------------------DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           L +                    + D  +E+   ++E  + P+  SY   + G+C    +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776

Query: 590 SDAFEFLNDALCR--GILPTTITWHILV 615
             A E + D + R  GI P+ + ++ L+
Sbjct: 777 RVA-EKVFDHMQRNEGISPSELVFNALL 803



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 164/626 (26%), Positives = 296/626 (47%), Gaps = 55/626 (8%)

Query: 39  HLFHHI-LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQ 97
           HL H + + R ID  + + V      ++  +C+        +I++   +    +AL++ +
Sbjct: 293 HLIHGLCVARRIDEAMDLFVK-----MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 98  RMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
            M E  G +  I         LC + +FEKA+  L  + EKGL P+V +Y  +ING  K 
Sbjct: 348 EMEET-GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G +  A+ V + M  R +  N   YN LI G+ K  +  +A  +  ++ +E  V P+VVT
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM-LERKVLPDVVT 464

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN +I+G C+ G FD    +   M       D +TY S I  LCK+  VE A  ++  + 
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           + G+  + V Y A+IDG+C+AGK+ E   + E M  K CL N +++N LI GL  +GK+ 
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           EA  + E + +       +T  +LI+ L K+G  + A     ++   G            
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                EGRL DA  ++ +M ++G   + +T +SL+ G+    +   A  + K M   GC 
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704

Query: 431 PTVVSYNTLINGLCKVE------------------RFGEAYSFVKEMLEKGWKPDMITYS 472
           P+  ++ +LI  L +++                   F      +++M+E    P+  +Y 
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYE 764

Query: 473 LLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            LI G+C+   + +A K+     + +G +P   ++N L+   C   K  +A ++  +M  
Sbjct: 765 KLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              +P L +   L+ GL+K G+ ++   ++ ++L+     D +++ I + G+     +  
Sbjct: 825 VGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
            +E  N     G   ++ T+ +L+  
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 272/573 (47%), Gaps = 39/573 (6%)

Query: 9   LNLLKA------EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI-- 60
           LNL+K       + N HT   L DS   +  +  +  L   +L + + P ++ + + I  
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402

Query: 61  -------------LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE------ 101
                        +EL+E +K          +I+ Y K+++  KA+ V  +M E      
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPD 461

Query: 102 --IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
              +       CR   F+ A R L+ + ++GL PD ++Y ++I+ L KS  +  A  +FD
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            + ++GV  NVV Y  LIDG+ K G    A  + E+++ +  + PN +T+N +I+GLC  
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCAD 580

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+  E   + ++M K   +    T    IH L K G+ + A   +++M+ SG   DA TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
              I  +CR G++ +  ++   M   G   ++ +Y+ LI+G  + G+ + A  + + +R+
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD---AASLVNRMDKHGCK 395
             C     T   LI  L +  Y     Q  +E E      + +      L+ +M +H   
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKY---GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGLCKVERFGEAYS 454
            NA +   L+ G  +   L  A  +F  M R +G SP+ + +N L++  CK+++  EA  
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V +M+  G  P + +  +LI GL +  + +    +    LQ G+  D   + I+I G+ 
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             G VE   +L++ M+K  C  +  TY+ L++G
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 229/458 (50%), Gaps = 23/458 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++F+   E N   YNIL+      G    A ++++    E +  P+VVTY +M++G C  
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFD----EMASPPDVVTYGIMVHGYCTL 298

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
              +  +++   M     E +   Y S I  LC  G V  A RV  +MV  G+ +DA  +
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ GFCR G +      ++ M ++G   + V+Y  LI GL   G++ EA  + + + +
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K  + D+ T+ VLI+G CK G + +A  + N                  +M +     N 
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN------------------KMVQKRVTPNV 460

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L +G  +   +  A  L  EM  KG    + +YN+LINGLCK     +A   + +
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID 520

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M E G KPD+ TY+ +I  LCQSK++D A  L  + L KG  P +  YN+L++G C +G+
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE   +L   M ++N  PN  TYN+LM       +     EI+  +L + + P+  +YNI
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            +KG C    M +A  F ++ + +G   T  +++ L+R
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 174/600 (29%), Positives = 281/600 (46%), Gaps = 65/600 (10%)

Query: 17  NPHT----ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP 72
           +PH     A+A   +A R+PG A +      ++R L  P    H   + + I   K +  
Sbjct: 144 HPHLLQSFAVAAHLAAVRDPGAARA-----ILVRALRFPS--PHRHFVEQFISTYKAFSS 196

Query: 73  EDVALSVI-------------QAYGKNSMP------------DKALDVFQRMNEIFGCEA 107
           + V+  ++             + YG +  P            D+A+ +FQ + E   C  
Sbjct: 197 DPVSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSY 256

Query: 108 GIL----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
            IL    C   + + A +  +   E    PDV +YG +++G     +L  A+ +  EM  
Sbjct: 257 NILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           RG+E N V Y  +I     +G    A  + E +VM   V  +   +  +++G C+ G   
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-DAAVFTTVMSGFCRKGDLA 372

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
                +D M+K     D  TY + I+GLC+AG ++ AERV +EM + G+ VDAVTY  +I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG+C+ GK+ E F +   M +K    NVV+Y  L  GL + G V  A  +   +  K   
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  T+  LINGLCK G L +A++ + +                  MD+ G K + YT  
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMID------------------MDEAGLKPDVYTYT 534

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +++    Q+ +L+ A  L +EM  KG  PT+V+YN L+NG C   R       ++ MLEK
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              P+  TY+ L+   C  K +    ++    L +   P+   YNILI G C A  +++A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL--RPDIISYNITL 580
           L  +S M ++       +YN L+  L K     +A  ++  + +ERL   PD+ ++ I L
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 187/362 (51%), Gaps = 27/362 (7%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           GI     + NA++   CR   + E  +L++ +  K   N  SYNIL++ L   G++ +A 
Sbjct: 221 GISPSPESCNAVL---CRL-PLDEAVQLFQELPEK---NTCSYNILLKALCTAGRIKDA- 272

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
              +L  E     D  T+G++++G C    L  AI++L+E+   G               
Sbjct: 273 --HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG+++DA  +V  M  HG  L+A    ++M+GF +   L  A   F EM ++G +   
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y  LINGLC+     EA   ++EM +KG   D +TY++LI+G C+  K+  A  +  +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +QK  TP+V  Y  L  GLC  G V  A +L   M  +    N+ TYN+L++GL K G+
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A+     + E  L+PD+ +Y   +  LC    +  A   L + L +GI PT +T+++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 614 LV 615
           L+
Sbjct: 571 LM 572



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 11/234 (4%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           +A L+ R+ ++G   +  +CN+++        L+ A+ LF+E+  K       SYN L+ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEKN----TCSYNILLK 261

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC   R  +A+    EM      PD++TY ++++G C   +++ A+KL  +   +G   
Sbjct: 262 ALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   Y  +I  LC  G+V DA+++  +M     V +   + T+M G  + GD   A   +
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + + +  L  D ++Y   + GLC    + +A   L +   +G+    +T+ +L+
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 272/568 (47%), Gaps = 37/568 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYS 137
           ++ ++  +++ D AL  + R+              R    A + L+S   +G ++P + +
Sbjct: 129 LLASFPTSALADAALSTYARL--------------RLPHLAAQLLHSFRRRGCVRPSLQA 174

Query: 138 YGTVINGLVKSGDL--LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
              V++ L +S       +L  F  +    +  N   +N+L+     KG    A     +
Sbjct: 175 ANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSK 234

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +     + P+ VTYN ++N  C+ G   E   +  RMKK        TY + +    + G
Sbjct: 235 M-QGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLG 293

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSY 313
            ++ A  V   M   G   D  TYN +  G C+AGK+ E F+L + M + G +  +VV+Y
Sbjct: 294 WIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTY 353

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+    +  +  +A+++ E +REK   +   TH +++ GLC+ G L +A+  L  + E
Sbjct: 354 NTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTE 413

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  G +A A  L++ M + G K++ +T N+L+    +  + E 
Sbjct: 414 EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L +   ++G  P  VSY T++    K  +   A     EM+++   P + TY+ LI 
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL    K+  A+    + ++ G  PD T YNI+IH  C  G +E A Q ++ M + +  P
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++VT NTLM+GL   G  +KA++++   +E+  + D+I+YN  ++ LC  + +  A  F 
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
            D   RG+ P   T+++L+ A+   G S
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRS 681



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 253/494 (51%), Gaps = 20/494 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            +SL    L P+ Y++  +++     G L  AL+   +M   G+  + V YN L++   +
Sbjct: 197 FHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCR 256

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           KG    A+ +  R+  E  + P   TYN +++   + G   +  ++ + M     E D +
Sbjct: 257 KGMLGEARTLLARMKKE-GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIF-VDAVTYNAMIDGFCRAGKIKECFELWEV 301
           TY     GLC+AG V+ A ++  EM + GI   D VTYN ++D   +  +  +   L E 
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KG   ++V++NI+++GL   G+++EA+   E++ E+    D  T+  LI+  CK G 
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           + KA  +++E+   G                 E R  +A  L+    + G   +  +  +
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +M  + +  K E A+ L+ EM ++  +P++ +YNTLI GL  + +  EA   + E++E G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD  TY+++I+  C+   ++ A +   + ++  F PDV   N L++GLC  G++E A+
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L+ +  ++    +++TYNTL+  L K  D D AL  +  +    L+PD+ +YN+ L  L
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675

Query: 584 CSCSRMSDAFEFLN 597
               R  +A + L+
Sbjct: 676 SEAGRSVEAQKMLH 689



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 249/522 (47%), Gaps = 71/522 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE---------AGILCRKRQFEKAKRFLNSLWE 128
           +++ AY +     +A DV + M   FG E         A  LC+  + ++A +  + + +
Sbjct: 284 TLVSAYARLGWIKQATDVVEAMTA-FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342

Query: 129 KGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            G+  PDV +Y T+++   K      AL + +EM E+GV++++V +NI++ G  ++G   
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG--- 399

Query: 188 RAKEIWERLVM--ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           + +E   RL M  E  + P+V+TYN +I+  CK G   +   + D M ++  + D+FT  
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGR 304
           + ++ LCK    E AE + R   + G   D V+Y  ++  + +  K +    LW E++ R
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           K   ++ +YN LI+GL   GK+ EAI     L E     D TT+ ++I+  CK G L KA
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKA 579

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
            Q                    N+M ++  K +  TCN+LMNG     +LE A+ LF+  
Sbjct: 580 FQ------------------FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESW 621

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             KG    V++YNTLI  LCK      A  F  +M  +G +PD+ TY++L++ L ++ + 
Sbjct: 622 VEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRS 681

Query: 485 DMALKLCCQFLQKG------FTP------------------------------DVTMYNI 508
             A K+  +  + G      F P                              D   YN 
Sbjct: 682 VEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNK 741

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
            I  LC  G++++A  +   M ++    +  TY TLM+GL K
Sbjct: 742 YIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 22/394 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ Q E+A   L  + E+GL PDV +Y T+I+   K+G++  A  + DEM   G++ +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N L+    K+  Y  A+E+  R   +    P+ V+Y  ++    K  + +  L +W
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELL-RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M K +      TY + I GL   G +  A     E++E G+  D  TYN +I  +C+ 
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +++ F+    M       +VV+ N L+ GL   G++++A+ ++E   EK    D  T+
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LCK+  ++ A++   ++E  G                  GR  +A  +++++++
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP--TVVSYNTLINGLCKVERF 449
            G KL        +   ++A +      +  ++   G +      SYN  I  LC   + 
Sbjct: 694 SG-KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQL 752

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            EA + + EM++KG   D  TY  L+ GL + +K
Sbjct: 753 KEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 13/250 (5%)

Query: 52  KLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE------IFG 104
           KL   + ++ EL+E+     P+D   ++I  AY K    +KA     +M E      +  
Sbjct: 540 KLTEAIDKLNELMEMG--LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597

Query: 105 CEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           C   +  LC   + EKA +   S  EKG K DV +Y T+I  L K  D+  AL  F +M 
Sbjct: 598 CNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADME 657

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN-GLCKCGR 221
            RG++ +V  YN+L+    + G  + A+++  +L     +Y      ++  +    + G+
Sbjct: 658 VRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGK 717

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             E     + +  N +  D  +Y  +I  LC  G ++ A+ V  EM++ G+ VD  TY  
Sbjct: 718 DPEVKSDIESV-GNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYIT 776

Query: 282 MIDGFCRAGK 291
           +++G  +  K
Sbjct: 777 LMEGLIKRQK 786


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 261/502 (51%), Gaps = 19/502 (3%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F + L  K   P  + +  +++ LVK+     AL++  +M   G+E++   +NILI+ F 
Sbjct: 48  FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFS 107

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G    +  I+ + +++   +P  +T+N +I GLC  G   + L   D++       D 
Sbjct: 108 QLGLNSLSFSIFAK-ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
            +Y + I+GLCK G +  A ++ + +    +  +AV YN +ID  C+A  + + F+L+ +
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ ++ C +V +YN LI G     K++ AI ++  ++++N N +  T  +L++G CK G 
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 361 LNKAIQIL---------------NEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +N A  +L               N + +G     ++  A  + + M   G   N     +
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++NGF +   ++ AI LF+EM  +   P VV+Y++LI+GLCK+ R   A   V EM ++G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P+++TYS +++ LC++  +D A+ L      +G  PD+  Y ILI GLC +G++EDA 
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            ++ ++  +    ++  Y  ++ G    G  DKAL + + + +    P+  +Y + +  L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526

Query: 584 CSCSRMSDAFEFLNDALCRGIL 605
                   A + L + + RG+L
Sbjct: 527 FEKDENDTAEKLLREMIVRGLL 548



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 212/424 (50%), Gaps = 20/424 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K    +A  F + +  +G   D  SYGT+INGL K G +  AL +   +  + V+ N
Sbjct: 141 LCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 200

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN++ID   K      A +++ ++V +  + P+V TYN +I+G     + +  ++++
Sbjct: 201 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++MKK     + +T+   + G CK G V  A+ V   M++  I  D VTYN+++DG+C  
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ +  ++++ M   G + NV  Y  ++ G  +   VDEAI+++E +R +    +  T+
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK                   GR+  A  LV+ M   G   N  T +S+++  
Sbjct: 380 SSLIDGLCK------------------LGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ AI L   +  +G  P + +Y  LI GLC+  R  +A +  +++L KG+  D+
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDV 481

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+++I G C     D AL L  +    G  P+   Y ++I  L    + + A +L   
Sbjct: 482 YAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLRE 541

Query: 529 MKKR 532
           M  R
Sbjct: 542 MIVR 545



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 76/162 (46%)

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           SF   +L K   P    ++ +++ L ++K    AL L  Q    G   D   +NILI+  
Sbjct: 47  SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              G    +  +++ + K+   P  +T+NTL+ GL   G   +AL   + ++ +    D 
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +SY   + GLC   R++ A + L     + + P  + +++++
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 208



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 57/132 (43%)

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L K  TP    +N ++  L  A     AL L+  M+      +  T+N L++   + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
              +  I+  IL++   P  I++N  +KGLC    +  A  F +  + +G     +++  
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 614 LVRAVMNNGAST 625
           L+  +   G  T
Sbjct: 172 LINGLCKVGRIT 183


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 183/664 (27%), Positives = 310/664 (46%), Gaps = 67/664 (10%)

Query: 17  NPHTALALFDSATREPGYAHS----PHL--FHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           NP+ A  LF      P  A S    P L     I R LI  K+   +  + +L+  Q   
Sbjct: 19  NPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRD 78

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRK----RQFEKAKRFLNSL 126
                  S+++      + + A+  F+ + + F  +   +       R   K  R    +
Sbjct: 79  FAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 127 W------EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           W         +KP  Y++  +I+ L + G L  A  VFD+M E+G + N     IL+ G+
Sbjct: 139 WLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + G +    ++ + +   +   PN V YN +I+ LC  G+  E  ++ ++M++     D
Sbjct: 199 CRAGLHSHGIDLLDEM-RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMV---ESGIF-VDAVTYNAMIDGFCRAGKIKECF 296
             T+   I  LCK+G +  A R++R+M    E G+   + VTYN M++GFC  G  +E  
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 297 ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
            +++ M     L++ SYNI + GL+ +GK+ EA  I   + EKN   +  ++ +L++GLC
Sbjct: 318 AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           K G  + A  IL  + E G                  G++ +A  ++  M + GC  N Y
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TCN L++   +  +   A  L + M+ +G     V+ NT+INGLCK     +A   V  M
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 460 LEKGWK-----------------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             +G                         PD ITY+ +I GLC+  ++D A K   + + 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           K  +PD  +++  I+  C  GK+  A ++   M+K+ C  +L TYN+L+ GL   G  ++
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL---GSENQ 614

Query: 557 ALEIWNHILEERLR---PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             EI+  + E + R   P++ +YN  +  L    ++ DA   L++ L +GI P   T+ I
Sbjct: 615 IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRI 674

Query: 614 LVRA 617
           L+ A
Sbjct: 675 LIGA 678



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 256/556 (46%), Gaps = 47/556 (8%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           D A+   +     F      LC     E A+   + + EKG KP+ +S G ++ G  ++G
Sbjct: 143 DMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAG 202

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
                + + DEM   G   N V YN +I     +G  + A+++ E++  E  + P++VT+
Sbjct: 203 LHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM-REVGLSPDIVTF 261

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNER----EKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           N  I  LCK G+  E   ++  M+ +E     + ++ TY   + G C  G  E A  ++ 
Sbjct: 262 NCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFD 321

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
            M  S   +   +YN  + G  R+GK+ E   +   M  K    N+ SYNIL+ GL + G
Sbjct: 322 SMKNSET-LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYG 380

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
              +A SI  L+RE     D+ T+  L++G C+ G + +A  +L E+ + G         
Sbjct: 381 MFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCN 440

Query: 376 --------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   EGR ++A  L+  M++ G  L+  TCN+++NG  +A  L+ AI +   M  +
Sbjct: 441 ILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTR 500

Query: 428 G-----------------------CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           G                       C P  ++Y T+I GLCKV R  EA   + EM+ K  
Sbjct: 501 GSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKL 560

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD + +   I   C+  K+  A ++  +  +KG    +  YN LI GL S  ++ +   
Sbjct: 561 SPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   MK+R   PN+ TYN ++  L + G    A  + + +L++ + P+I ++ I +    
Sbjct: 621 LMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFF 680

Query: 585 SCSRMSDAFEFLNDAL 600
                  A E    AL
Sbjct: 681 KACDFGAAQELFEIAL 696



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 271/616 (43%), Gaps = 121/616 (19%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P + +L + ++ Y +  +    +D+   M           +      LC + Q  +A++ 
Sbjct: 186 PNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKL 245

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF---ERGV-ETNVVCYNILID 178
           +  + E GL PD+ ++   I  L KSG +L A  +F +M    E G+ + N V YN++++
Sbjct: 246 VEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLE 305

Query: 179 GFFKKGDYMRAKEIWERL---------------------------------VMETSVYPN 205
           GF  +G +  A+ I++ +                                 + E ++ PN
Sbjct: 306 GFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           + +YN++++GLCK G F +   +   M+++    D+ TY + +HG C+ G +  A  V R
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG 324
           EM++ G F +  T N ++    + G+  E  +L ++M  +G  L+ V+ N +I GL + G
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAG 485

Query: 325 KVDEAISI----W---------------ELLREKN----CNADSTTHGVLINGLCKNGYL 361
            +D+AI I    W               +L   +N    C  DS T+  +I GLCK G +
Sbjct: 486 NLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545

Query: 362 NKAIQILNEV-----------------EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           ++A + L E+                     +G+L+ A  ++  M+K GC  +  T NSL
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G    +++     L  EM  +G  P V +YN +I+ L +  +  +A   + EML+KG 
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGI 665

Query: 465 KPDMITYSLLINGLCQS-------KKIDMALKLCC-----------QFLQKGFTPDVT-- 504
            P++ T+ +LI    ++       +  ++AL LC            + L  G T      
Sbjct: 666 SPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 505 --------------MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                         +Y  LI  LC  GK++DA  +   M  +    +  ++  ++D L K
Sbjct: 726 FEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGK 785

Query: 551 TGDCDKALEIWNHILE 566
            G    A E    ++E
Sbjct: 786 RGSKHAADEFAERMME 801



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 56/351 (15%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN+L R  L+  +VD  I +++ +        + T  +LI+ LC+ GYL  A ++ +   
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFD--- 177

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                          +M + GCK N ++   L+ G+ +A    + I L  EM   G  P 
Sbjct: 178 ---------------KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPN 222

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+YNT+I+ LC   +  EA   V++M E G  PD++T++  I  LC+S +I  A ++  
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282

Query: 493 QFL---QKGFT-PDVTMYNILIHGLCSAGKVEDALQLYSNMK------------------ 530
                 + G   P+   YN+++ G CS G  E+A  ++ +MK                  
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLV 342

Query: 531 ----------------KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
                           ++N  PNL +YN L+ GL K G    A  I   + E  + PD +
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +Y+  L G C   ++ +A   L + +  G  P   T +IL+ ++   G ++
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 15/254 (5%)

Query: 59  RILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------- 109
           ++LE+I   K   P+ +   + I  Y K      A  V + M E  GC   +        
Sbjct: 551 KLLEMI--GKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM-EKKGCNKSLRTYNSLIQ 607

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            L  + Q  +    ++ + E+G+ P+VY+Y  +I+ L + G L  A  + DEM ++G+  
Sbjct: 608 GLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISP 667

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+  + ILI  FFK  D+  A+E++E + +    +   + Y+ M N L   G   +  E+
Sbjct: 668 NIYTFRILIGAFFKACDFGAAQELFE-IALSLCGHKESL-YSFMFNELLAGGETLKAKEL 725

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++          +F Y   I  LCK G ++ A  +  +M++     D  ++  +ID   +
Sbjct: 726 FEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGK 785

Query: 289 AGKIKECFELWEVM 302
            G      E  E M
Sbjct: 786 RGSKHAADEFAERM 799



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 71/157 (45%)

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P +  Y+LL     +  ++D  + L          P    +N+LI  LC  G +E+A ++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M ++ C PN  +   L+ G  + G     +++ + +      P+ ++YN  +  LC 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +  +A + +      G+ P  +T++  + A+  +G
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSG 272


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 284/579 (49%), Gaps = 28/579 (4%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALD-- 94
            P +F  ++R     +          LI   +   P   + +++ A  +   P  A D  
Sbjct: 85  QPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAY 144

Query: 95  --VFQRMNEIFGCEAGIL----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
             VF   +E+      I+    C+  +F+K    ++ + ++ + PDV ++  +++   ++
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 204

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD   A+A+ D M  +G++  +V YN ++ G  + G + +A E+++ +  +  V P+V +
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD-DFGVAPDVRS 263

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           + ++I G C+ G  +E L+++  M+    + D  ++   I    + G ++ A    REM 
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
             G+  D V Y  +I GFCRAG + +   + + M   GCL +VV+YN L+ GL +  ++ 
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A  +   +RE+    D  T   LI+G C  G L+KA+Q                  L +
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ------------------LFD 425

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M     + +  T N+L++G  +   L+ A  L+ +M  +   P  V+Y+ LI+  C+  
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  +A+ F+ EM+ KG  P+++TY+ +I G C+S  +    K   + +    +PD+  YN
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LIHG     K+ DA +L + M+K    P++VTYN L++G    G+  +A  I+  +  +
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            + PD  +Y   + G  +     +AF+  ++ L RG  P
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 242/492 (49%), Gaps = 20/492 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+   +++   K+ +     AV  EM +R V  +VV +N+++D  F+ GD   A  + 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +V    + P +VTYN ++ GLC+ G +D+  E++  M       D  ++   I G C+
Sbjct: 215 DSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            G +E A ++Y+EM   GI  D V+++ +I  F R GK+         M   G + + V 
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ++I G    G + +A+ + + +    C  D  T+  L+NGLCK               
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK--------------- 378

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              E RL DA  L+N M + G   +  T  +L++G+    KL+ A+ LF  M  +   P 
Sbjct: 379 ---ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           +V+YNTLI+G+C+     +A     +M  +   P+ +TYS+LI+  C+  +++ A     
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + + KG  P++  YN +I G C +G V    +    M      P+L+TYNTL+ G  K  
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
               A ++ N + +E+++PD+++YN+ + G      + +A         +GI P   T+ 
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615

Query: 613 ILVRAVMNNGAS 624
            ++   +  G S
Sbjct: 616 SMINGHVTAGNS 627



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 235/463 (50%), Gaps = 20/463 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +F    E N    NI++  + K  ++ +   +   +  +  V+P+VVT+NVM++   + G
Sbjct: 147 VFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAG 205

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +  + + D M     +    TY S + GLC++G  + A  V++EM + G+  D  ++ 
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +I GFCR G+I+E  ++++ M  +G   ++VS++ LI      GK+D A++    +R  
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D   + ++I G C+ G ++ A+++ +E                  M   GC  +  
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDE------------------MVGCGCLPDVV 367

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L+NG  +  +L +A  L  EM  +G  P + ++ TLI+G C   +  +A      M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           L +  +PD++TY+ LI+G+C+   +D A  L      +   P+   Y+ILI   C  G+V
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           EDA      M  +  +PN++TYN+++ G  ++G+  K  +    ++  ++ PD+I+YN  
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + G     +M DAF+ LN      + P  +T+++L+     +G
Sbjct: 548 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 590


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 252/492 (51%), Gaps = 20/492 (4%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           SL    L P+ Y++  +++     G L  AL+    M   G+  +VV YN L+    +KG
Sbjct: 200 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKG 259

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A+ +  R+  E  + P   TYN +++   + G   +   + + M     E D +TY
Sbjct: 260 MLGEARTLLARMKKE-GIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTY 318

Query: 245 CSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
                GLC+AG V+ A ++  EM   S +  D VTYN ++D   +  +  +   L E M 
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMR 378

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            KG   ++V++NI+++GL   G+++EA+   +++ E+    D  T+  LI+  CK   + 
Sbjct: 379 DKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVA 438

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           KA  +++E+   G                 E R  +A  L+    + G   +  +  ++M
Sbjct: 439 KAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVM 498

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
             + + +K E A++L+ EMS++  +P++ +YNTLI GLC + +  EA   + E+++KG  
Sbjct: 499 AAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLV 558

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD  TY+++I+  C+   ++ A +   + L+  F PDV   N L++GLC  GK+E A++L
Sbjct: 559 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKL 618

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           + +  ++    +++TYNTL+  L K GD D AL  +  +    L+PD  +YN+ L  L  
Sbjct: 619 FESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678

Query: 586 CSRMSDAFEFLN 597
             R  +A   L+
Sbjct: 679 AGRSEEAQNMLH 690



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 255/535 (47%), Gaps = 23/535 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDL--LGALAVFDEMFERGVET 168
           R R    A + L+S   +G ++P + +   V++ L +S       +L VF  +    +  
Sbjct: 149 RLRLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHP 208

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   +N+L+     KG    A      +     + P+VVTYN ++   C+ G   E   +
Sbjct: 209 NHYTFNLLVHTHCSKGTLADALSTLSTM-QGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             RMKK        TY + +    + G ++ A  V   M   G   D  TYN +  G C+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 289 AGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           AGK+ E F+L + M     +  +VV+YN L+    +  +  +A+++ E +R+K   +   
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRM 389
           TH +++ GLC+ G L +A+  L  + E G                    +A A  L++ M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G K++ +T N+L+    +  + E A  L +   ++G  P  VSY T++    K  + 
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A     EM ++   P + TY+ LI GLC   K+  A+    + ++KG  PD T YNI+
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           IH  C  G +E A Q ++ M +    P++VT NTLM+GL   G  +KA++++    E+  
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + D+I+YN  ++ LC    +  A  F  D   RG+ P   T+++++ A+   G S
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRS 682



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 241/504 (47%), Gaps = 35/504 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE---------AGILCRKRQFEKAKRFLNSLWE 128
           +++ AY +     +A +V + M   FG E         A  LC+  + ++A +  + +  
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMT-AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 129 KGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
             +  PDV +Y T+++   K      AL + +EM ++GV++++V +NI++ G  ++G   
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG--- 400

Query: 188 RAKEIWERLVM--ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           + +E   RL M  E  + P+V+TYN +I+  CK     +   + D M ++  + D+FT  
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLN 460

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-R 304
           + ++ LCK    E AE + R   + G   D V+Y  ++  + +  K +    LW+ M  R
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR 520

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           K   ++ +YN LI+GL   GK+ EAI     L +K    D TT+ ++I+  CK G L KA
Sbjct: 521 KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKA 580

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            Q  N++ E                    G+L  A  L     + G K++  T N+L+  
Sbjct: 581 FQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   ++ A+  F +M  +G  P   +YN +++ L +  R  EA + + ++ E G   +
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700

Query: 468 MITYSLLINGLCQSKK-IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
             +Y L+ +   + K   D  +K  C+        D   YN  +  LC  G++++A  + 
Sbjct: 701 RFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVL 760

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFK 550
             M ++    +  TY TLM+GL K
Sbjct: 761 DEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 189/394 (47%), Gaps = 22/394 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ Q E+A   L  + E+GL PDV +Y T+I+   K+ ++  A  + DEM   G++ +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               N L+    K+  Y  A+E+  R   +    P+ V+Y  ++    K  + +  L +W
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELL-RSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLW 514

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M K +     +TY + I GLC  G +  A     E+++ G+  D  TYN +I  +C+ 
Sbjct: 515 DEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE 574

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +++ F+    M       +VV+ N L+ GL  +GK+++AI ++E   EK    D  T+
Sbjct: 575 GDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITY 634

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LCK+G ++ A+    ++E  G                  GR  +A ++++++D+
Sbjct: 635 NTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP--TVVSYNTLINGLCKVERF 449
            G KL+      L+    +  K      +  +    G +      SYN  +  LC   + 
Sbjct: 695 SG-KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQL 753

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            EA + + EM++KG   D  TY  L+ GL + +K
Sbjct: 754 KEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 243/467 (52%), Gaps = 26/467 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  ++  ++NG  K G       + + M  RG++ NVV YN L++G  K   +  A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 190 KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           +E+   ++       P++VTY+ +++G CK G+ +E  E+   +       D+  Y   +
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
             LCK+  +  A  +  EM+ +G     +T+N +I G CR   ++    L + M   G  
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV+YN L+ GL + G++ EA  + E ++   C  D   +   + GLCK+G +  A Q+
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SR 426
           L ++                R   H    N  T N++++G  ++ K++ A+ + ++M S 
Sbjct: 245 LEQM----------------RDSDH--DPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            GC   VV Y+T+++GLCK+ R  EA S ++ M   G +PD++TYS L+NGLC++ KI+ 
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR-----NCVPNLVTY 541
           A++   +   +G  P+   Y  L+HGLCS G++ +A ++   M        +C P++ TY
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           N L+ GL K G  D AL+ +  +  +   PD +SY+  ++GL    R
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 241/474 (50%), Gaps = 36/474 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  AL +  +++        L   +  R I P +V +   +  L ++++ +  E++ 
Sbjct: 9   NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +I + G  S PD  L  +  +   + C+AG      + E+++  L  +  +GL+PD  
Sbjct: 69  RDMI-SRGGRSTPD--LVTYSTLLSGY-CKAG------KVEESRELLKEVISRGLRPDAL 118

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            Y  V+  L KS  L  AL + +EM   G    ++ +N LI G  ++ +   A  + + +
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
              + V  +VVTYN +++GLCK GR  E  ++ +RMK +    D   Y SF++GLCK+G 
Sbjct: 179 A-ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GC-LNVVSYN 314
           V  A +V  +M +S    + VTYN ++DG C++GKI    E+ E M    GC LNVV Y+
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ GL + G+  EA S+ E +    C  D  T+  L+NGLCK G + +A++ + E    
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE---- 353

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG-----C 429
                         M   GCK NA T  SL++G     +L  A  + +EMS  G     C
Sbjct: 354 --------------MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHC 399

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            P+V +YN LI GLCK  R  +A  F + M  +G  PD ++YS ++ GL +S +
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 193/377 (51%), Gaps = 21/377 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           M  +G   ++VT+NA+++GF + G+  +C  L E M  +G   NVVSYN L+ GL +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 326 VDEAISIWE--LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
             EA  +    + R      D  T+  L++G CK G + ++ ++L EV   G        
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      RL +A  L+  M + GC     T N+L++G  +   LE A  L + M+ 
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G    VV+YNTL++GLCK  R  EA   ++ M   G  PD++ YS  + GLC+S K+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVTYNTLM 545
           A ++  Q       P+V  YN ++ GLC +GK++ AL++   M   + C  N+V Y+T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DGL K G   +A  +   +     RPD+++Y+  + GLC   ++ +A E + +    G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T+  LV  + + G
Sbjct: 361 PNAVTYCSLVHGLCSCG 377



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 32/57 (56%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           P V +Y  +I GL K+G +  AL  F  M  +G + + V Y+ +++G  + G  ++A
Sbjct: 401 PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 256/512 (50%), Gaps = 26/512 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ + ++A      + ++G++PD+ +Y T+I+G  K+G L     +F +   +GV+ +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++  ID + K GD   A  +++R++ +  + PNVVTY ++I GLC+ GR  E   M+
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMY 414

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++ K   E    TY S I G CK GN+     +Y +M++ G   D V Y  ++DG  + 
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +        +++G+   LNVV +N LI G     + DEA+ ++ L+       D  T 
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534

Query: 349 ------GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
                  ++ +  CK+      +Q                  L + M ++    +   CN
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQ------------------LFDLMQRNKISADIAVCN 576

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            +++   +  ++E+A   F  +      P +V+YNT+I G C + R  EA    + +   
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
            + P+ +T ++LI+ LC++  +D A+++     +KG  P+   Y  L+     +  +E +
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            +L+  M+++   P++V+Y+ ++DGL K G  D+A  I++  ++ +L PD+++Y I ++G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            C   R+ +A       L  G+ P  +    L
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/693 (23%), Positives = 313/693 (45%), Gaps = 94/693 (13%)

Query: 9   LNLLKAEKNPHTALALF---DSATREPGYAHSPHLF-----HHILRRLIDPKLVVHVSRI 60
           L LL  E  P++AL  F   + + ++P +    H+        +  ++ D  +       
Sbjct: 74  LVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
             L  I+      DV   +++   +  M DKAL++F     ++  + G++  +   +   
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIF-----VYSTQLGVVIPQ---DSVY 185

Query: 121 RFLNSL------------WEK----GLKPD-VYSYGTVINGLVKSGDLLGALAVFDEMFE 163
           R LNSL            ++K    G++P  V ++G V++ L   G++  AL     + E
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVME 245

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           RG    +V  N ++ G     D +        LV++    PNVVT+  +ING CK G  D
Sbjct: 246 RGFRVGIVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              +++  M++   E D   Y + I G  KAG +    +++ + +  G+ +D V +++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 284 DGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D + ++G +     +++ M  +G   NVV+Y ILI+GL ++G++ EA  ++  + ++   
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
               T+  LI+G CK G L     +  ++ + G                 +G +  A   
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY--------- 436
             +M     +LN    NSL++G+ + ++ + A+ +F+ M   G  P V ++         
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 437 --------------------------------NTLINGLCKVERFGEAYSFVKEMLEKGW 464
                                           N +I+ L K  R  +A  F   ++E   
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +PD++TY+ +I G C  +++D A ++        F P+     ILIH LC    ++ A++
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           ++S M ++   PN VTY  LMD   K+ D + + +++  + E+ + P I+SY+I + GLC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
              R+ +A    + A+   +LP  + + IL+R 
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 17/170 (10%)

Query: 45  LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE-- 101
           LRRL + +      RI EL+++   + P  V L++ I    KN+  D A+ +F  M E  
Sbjct: 620 LRRLDEAE------RIFELLKVTP-FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672

Query: 102 ------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
                  +GC      +    E + +    + EKG+ P + SY  +I+GL K G +  A 
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            +F +  +  +  +VV Y ILI G+ K G  + A  ++E + +   V P+
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM-LRNGVKPD 781


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 262/518 (50%), Gaps = 24/518 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG---VETNVVCYNILIDG 179
           L+ + ++G   +VY+   V+ G  +SG    A+++F +M +R    V  + V YN L++G
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNG 158

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K      A+ ++E +       PN+VTY+V+I+  CK G   E L + + M++   + 
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D F Y S I   C  G++E    ++ EM+   +  + VTY+ ++ G  R G+ +E  E+ 
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M  +G   +VV+Y +L  GL +NG+  +AI + +L+ +K     + T+ V++NGLCK 
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 359 GYLNKAIQIL---------------NEVEEG--GEGRLADAASLVNRM--DKHGCKLNAY 399
             ++ A  ++               N + +G  G G++ +A  L   +  +K   K + +
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVF 398

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TCN+L+ G  +  ++ +A  +   M   G    +V+YN LI G     +  EA    K  
Sbjct: 399 TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYA 458

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +E G+ P+ +TYS++INGLC+ + + +A  L C+    G  P V  YN L+  LC    +
Sbjct: 459 VESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSL 518

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E A  L+  M+  N   ++V++N ++DG  K GD   A E+ + +    L PD ++++I 
Sbjct: 519 EQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSIL 578

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +        + +A       +  G +P  + +  L++ 
Sbjct: 579 INRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 264/518 (50%), Gaps = 33/518 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEA----------GILCRKRQFEKAKRFLNSLWE 128
           V++ + ++   DKA+ +F +M   + C               C+ ++  +A+    ++ +
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177

Query: 129 KG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            G  +P++ +Y  +I+   KSG++   L + +EM   G++ +V  Y+ LI  F  +GD  
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIE 237

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
             +E+++ + +   V PNVVTY+ ++ GL + GR+ E  EM   M       D   Y   
Sbjct: 238 TGRELFDEM-LRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             GLCK G    A +V   MV+ G     +TYN +++G C+  ++ + F + E+M +KG 
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREK--NCNADSTTHGVLINGLCKNGYLNKA 364
             + V+YN L++GL   GK+ EA+ +W+LL  +  +   D  T   LI GLCK       
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCK------- 409

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      EGR+ DAA + + M + G + N  T N L+ G++ A KL  A+ L+K  
Sbjct: 410 -----------EGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYA 458

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G SP  ++Y+ +INGLCK++    A     +M + G +P +I Y+ L+  LC+   +
Sbjct: 459 VESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSL 518

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           + A  L  +        DV  +NI+I G   AG V+ A +L S M   + VP+ VT++ L
Sbjct: 519 EQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSIL 578

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++   K G  D+A+ ++  ++     P ++ ++  LKG
Sbjct: 579 INRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 256/528 (48%), Gaps = 22/528 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQ++      + +    + P   S   +    V +     A +V   M +RG   N
Sbjct: 52  LRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVN 111

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
           V   N+++ GF + G   +A  ++ ++      V P+ VTYN ++NG CK  R  E   +
Sbjct: 112 VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVL 171

Query: 229 WDRMKK-NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++ MKK  +   +  TY   I   CK+G V     +  EM   G+  D   Y+++I  FC
Sbjct: 172 FEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFC 231

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G I+   EL+ E++ RK   NVV+Y+ L++GL   G+  EA  + + +  +    D  
Sbjct: 232 GEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVV 291

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            + VL +GLCKNG    AI++L+ + + G                 E R+ DA  +V  M
Sbjct: 292 AYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMM 351

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVE 447
            K G K +A T N+L+ G   A K+  A+ L+K +   +    P V + N LI GLCK  
Sbjct: 352 VKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEG 411

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  +A      M+E G + +++TY+ LI G   ++K+  ALKL    ++ GF+P+   Y+
Sbjct: 412 RVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYS 471

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ++I+GLC    +  A  L+  MK     P ++ YN LM  L +    ++A  ++  +   
Sbjct: 472 VMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
               D++S+NI + G      +  A E L++     ++P  +T+ IL+
Sbjct: 532 NHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 210/397 (52%), Gaps = 23/397 (5%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I  L KA   +    VY +MV + +     + +A+ + F         F +  +M ++
Sbjct: 47  TLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKR 106

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNA-DSTTHGVLINGLCKNGYLN 362
           G  +NV + N++++G   +G+ D+A+S++ ++ R  +C   D  T+  L+NG CK   L 
Sbjct: 107 GFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLA 166

Query: 363 KAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNAYTCNSL 404
           +A  +   +++GG+                  G + +   L+  M++ G K + +  +SL
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++ F     +E    LF EM R+  SP VV+Y+ L+ GL +  R+ EA   +K+M  +G 
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +PD++ Y++L +GLC++ +   A+K+    +QKG  P    YN++++GLC   +++DA  
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER--LRPDIISYNITLKG 582
           +   M K+   P+ VTYNTL+ GL   G   +A+++W  +L E+  ++PD+ + N  ++G
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           LC   R+ DA    +  +  G+    +T++ L+   +
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 131/285 (45%), Gaps = 42/285 (14%)

Query: 379 LADAASLVNRM--DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           L+DA SL +R   +      +   C++L++   +A + +  + ++ +M      P   S 
Sbjct: 21  LSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSL 80

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + L            A+S +  M ++G+  ++   +L++ G C+S + D A+ L  Q ++
Sbjct: 81  SALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQ-MK 139

Query: 497 KGF---TPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-RNCVPNLVTYNTLMD------ 546
           + +    PD   YN L++G C A ++ +A  L+  MKK  +C PNLVTY+ L+D      
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 547 ------GLFK-----------------------TGDCDKALEIWNHILEERLRPDIISYN 577
                 GL +                        GD +   E+++ +L  ++ P++++Y+
Sbjct: 200 EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYS 259

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             ++GL    R  +A E L D   RG+ P  + + +L   +  NG
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNG 304



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 40/261 (15%)

Query: 402 NSLMNGFIQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           NS      Q   L +A+ LF     +     P+  + +TLI+ L K  ++    S   +M
Sbjct: 9   NSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKM 68

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +     P   + S L      +     A  +     ++GF  +V   N+++ G C +G+ 
Sbjct: 69  VSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQC 128

Query: 520 EDALQLYSNMKKR--------------------------------------NCVPNLVTY 541
           + A+ L+S MK+                                       +C PNLVTY
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTY 188

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           + L+D   K+G+  + L +   +  E L+ D+  Y+  +   C    +    E  ++ L 
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248

Query: 602 RGILPTTITWHILVRAVMNNG 622
           R + P  +T+  L++ +   G
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTG 269


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 254/489 (51%), Gaps = 22/489 (4%)

Query: 133 PDVYSYGTVINGLVKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P +  +  ++  +VK+ +     A+++  ++  +G+   +V +NIL++ +   G+   A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            I+ + +++   +P  +T+N +ING+C  G+  E L   D +       D  +Y + I+G
Sbjct: 115 SIFAK-ILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLN 309
           LCK G    A ++ +++    +  D V YN +I+  C+   + + ++L+ E++ ++   +
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD 233

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV++N LI G    G++ EA  ++  +  KN N D  T  +L++ LCK            
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCK------------ 281

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 +G +  A +++  M K G   +  T +SLM+G+   +++  A  +F  MSR G 
Sbjct: 282 ------DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P   SYN +INGL K++   EA S  KEM  KG  PD +TY+ LI+GLC+  +I  A +
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +    G   D+  YN LI  LC    ++ A+ L   +K +   P++ TYN L+DGL 
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC 455

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G    A +++  +L +    +  +YNI + GLC     ++A   L+     GI+P  +
Sbjct: 456 KGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAV 515

Query: 610 TWHILVRAV 618
           T+  ++RA+
Sbjct: 516 TYETIIRAL 524



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 217/424 (51%), Gaps = 20/424 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C   + ++A  F + +   G   D  SY T+INGL K G+   AL +  ++  + V T+
Sbjct: 139 ICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTD 198

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YNI+I+   K      A +++  ++ +  + P+VVT+N +I G C  G+  E   ++
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITK-RISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D +T+   +  LCK GN+  A+ +   M++ G+  D VTY++++DG+C  
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   ++  M R G   +  SYNI+I GL +   VDEA+S+++ +  K    D+ T+
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK                   GR++ A  LV+ M  +G   +  T NSL++  
Sbjct: 378 NSLIDGLCK------------------LGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ AI L K++  +G  P++ +YN LI+GLCK  R   A    +++L KG+  + 
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNA 479

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++INGLC+    + A  L  +    G  PD   Y  +I  L    + E A +L   
Sbjct: 480 WTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLRE 539

Query: 529 MKKR 532
           M  R
Sbjct: 540 MIIR 543



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 227/476 (47%), Gaps = 22/476 (4%)

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD--YMRAKEIWERLVMETSVYPNVV 207
           D+   ++ F  M       ++V +N ++    K  +  Y  A  +  +L ++  + P +V
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELK-GITPTIV 95

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T+N+++N  C  G       ++ ++ K      + T+ + I+G+C  G ++ A   +  +
Sbjct: 96  TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           +  G  +D V+Y  +I+G C+ G+ +   + L ++ G+    +VV YNI+I  L ++  V
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A  ++  +  K  + D  T   LI G C                    G+L +A  L 
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCV------------------VGQLKEAFGLF 257

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M       + YT + L++   +   +  A  +   M ++G  P VV+Y++L++G C V
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
               +A      M   G  P   +Y+++INGL + K +D AL L  +   KG  PD   Y
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N LI GLC  G++  A QL   M       +++TYN+L+D L K    DKA+ +   I +
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++P + +YNI + GLC   R+ +A +   D L +G      T++I++  +   G
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 181/355 (50%), Gaps = 20/355 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +    A +  + +  K + PDV ++ ++I G    G L  A  +F EM  + +  +
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  ++IL+D   K G+  RAK +   ++M+  V P+VVTY+ +++G C     ++   ++
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLA-VMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF 327

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +      + +Y   I+GL K   V+ A  +++EM   GI  D VTYN++IDG C+ 
Sbjct: 328 STMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I   ++L + M   G   ++++YN LI  L +N  +D+AI++ + ++++       T+
Sbjct: 388 GRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTY 447

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+GLCK                   GRL +A  +   +   G  +NA+T N ++NG 
Sbjct: 448 NILIDGLCKG------------------GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            +      A  L  +M   G  P  V+Y T+I  L + +   +A   ++EM+ +G
Sbjct: 490 CKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 123/226 (54%), Gaps = 2/226 (0%)

Query: 402 NSLMNGFIQASK--LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           N ++   ++A+      AI L  ++  KG +PT+V++N L+N  C +     A+S   ++
Sbjct: 61  NKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKI 120

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           L+ G+ P  IT++ LING+C + K+  AL      +  GF  D   Y  LI+GLC  G+ 
Sbjct: 121 LKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGET 180

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
             ALQ+   ++ +    ++V YN +++ L K      A ++++ ++ +R+ PD++++N  
Sbjct: 181 RAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSL 240

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + G C   ++ +AF   ++ + + I P   T+ ILV A+  +G  T
Sbjct: 241 ILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 19/209 (9%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------------LCRKRQFEKAKRFLNS 125
           +I   GK  M D+AL +F+ M     C  GI             LC+  +   A + ++ 
Sbjct: 345 MINGLGKIKMVDEALSLFKEM-----CCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   G+  D+ +Y ++I+ L K+  +  A+A+  ++ ++G++ ++  YNILIDG  K G 
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGR 459

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A+++++ L+++     N  TYN+MINGLCK G F+E   +  +M+ N    D+ TY 
Sbjct: 460 LKNAQDVFQDLLIK-GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYE 518

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFV 274
           + I  L +    E AE++ REM+  G+ +
Sbjct: 519 TIIRALFRKDENEKAEKLLREMIIRGLLL 547


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 229/458 (50%), Gaps = 23/458 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++F+   E N   YNIL+      G    A ++++    E +  P+VVTY +M++G C  
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFD----EMASPPDVVTYGIMVHGYCTL 298

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
              +  +++   M     E +   Y S I  LC  G V  A RV  +MV  G+ +DA  +
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ GFCR G +      ++ M ++G   + V+Y  LI GL   G++ EA  + + + +
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K  + D+ T+ VLI+G CK G + +A  + N                  +M +     N 
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN------------------KMVQKRVTPNV 460

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L +G  +   +  A  L  EM  KG    + +YN+LINGLCK     +A   + +
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID 520

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M E G KPD+ TY+ +I  LCQSK++D A  L  + L KG  P +  YN+L++G C +G+
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE   +L   M ++N  PN  TYN+LM       +     EI+  +L + + P+  +YNI
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            +KG C    M +A  F ++ + +G   T  +++ L+R
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 178/596 (29%), Positives = 280/596 (46%), Gaps = 65/596 (10%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLI--------DPKLVVHVSRILEL 63
           L A ++P  A A+   A R P    SPH   H + + I        DP     VS  L L
Sbjct: 157 LAAVRDPGAARAILVRALRFP----SPH--RHFVEQFISTYKAFSSDP-----VSFDLLL 205

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMP------------DKALDVFQRMNEIFGCEAGIL- 110
           + +     P    L  ++ YG +  P            D+A+ +FQ + E   C   IL 
Sbjct: 206 LCL-----PSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILL 260

Query: 111 ---CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
              C   + + A +  +   E    PDV +YG +++G     +L  A+ +  EM  RG+E
Sbjct: 261 KALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLE 317

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V Y  +I     +G    A  + E +VM   V  +   +  +++G C+ G       
Sbjct: 318 LNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-DAAVFTTVMSGFCRKGDLAAARN 376

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +D M+K     D  TY + I+GLC+AG ++ AERV +EM + G+ VDAVTY  +IDG+C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + GK+ E F +   M +K    NVV+Y  L  GL + G V  A  +   +  K    +  
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LINGLCK G L +A++ + +                  MD+ G K + YT  +++ 
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMID------------------MDEAGLKPDVYTYTTIIG 538

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              Q+ +L+ A  L +EM  KG  PT+V+YN L+NG C   R       ++ MLEK   P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +  TY+ L+   C  K +    ++    L +   P+   YNILI G C A  +++AL  +
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL--RPDIISYNITL 580
           S M ++       +YN L+  L K     +A  ++  + ++RL   PD+ ++ I L
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDL 714



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 27/369 (7%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           GI     + NA++   CR   + E  +L++ +  K   N  SYNIL++ L   G++ +A 
Sbjct: 221 GISPSPESCNAVL---CRL-PLDEAVQLFQELPEK---NTCSYNILLKALCTAGRIKDA- 272

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
              +L  E     D  T+G++++G C    L  AI++L+E+   G               
Sbjct: 273 --HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG+++DA  +V  M  HG  L+A    ++M+GF +   L  A   F EM ++G +   
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y  LINGLC+     EA   ++EM +KG   D +TY++LI+G C+  K+  A  +  +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +QK  TP+V  Y  L  GLC  G V  A +L   M  +    N+ TYN+L++GL K G+
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A+     + E  L+PD+ +Y   +  LC    +  A   L + L +GI PT +T+++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 614 LVRAVMNNG 622
           L+     +G
Sbjct: 571 LMNGFCMSG 579



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 11/234 (4%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           +A L+ R+ ++G   +  +CN+++        L+ A+ LF+E+  K       SYN L+ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEKN----TCSYNILLK 261

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC   R  +A+    EM      PD++TY ++++G C   +++ A+KL  +   +G   
Sbjct: 262 ALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   Y  +I  LC  G+V DA+++  +M     V +   + T+M G  + GD   A   +
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + + +  L  D ++Y   + GLC    + +A   L +   +G+    +T+ +L+
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 229/458 (50%), Gaps = 23/458 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++F+   E N   YNIL+      G    A ++++    E +  P+VVTY +M++G C  
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFD----EMASPPDVVTYGIMVHGYCTL 298

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
              +  +++   M     E +   Y S I  LC  G V  A RV  +MV  G+ +DA  +
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ GFCR G +      ++ M ++G   + V+Y  LI GL   G++ EA  + + + +
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K  + D+ T+ VLI+G CK G + +A  + N                  +M +     N 
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN------------------KMVQKRVTPNV 460

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L +G  +   +  A  L  EM  KG    + +YN+LINGLCK     +A   + +
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID 520

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M E G KPD+ TY+ +I  LCQSK++D A  L  + L KG  P +  YN+L++G C +G+
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE   +L   M ++N  PN  TYN+LM       +     EI+  +L + + P+  +YNI
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            +KG C    M +A  F ++ + +G   T  +++ L+R
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 179/596 (30%), Positives = 280/596 (46%), Gaps = 65/596 (10%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLI--------DPKLVVHVSRILEL 63
           L A ++P  A A+   A R P    SPH   H + + I        DP     VS  L L
Sbjct: 157 LAAVRDPGAARAILVRALRFP----SPH--RHFVEQFISTYKAFSSDP-----VSFDLLL 205

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMP------------DKALDVFQRMNEIFGCEAGIL- 110
           + +     P    L  ++ YG +  P            D+A+ +FQ + E   C   IL 
Sbjct: 206 LCL-----PSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILL 260

Query: 111 ---CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
              C   + + A +  +   E    PDV +YG +++G     +L  A+ +  EM  RG+E
Sbjct: 261 KALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLE 317

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V Y  +I     +G    A  + E +VM   V  +   +  +++G C+ G       
Sbjct: 318 LNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-DAAVFTTVMSGFCRKGDLAAARN 376

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +D M+K     D  TY + I+GLC+AG ++ AERV +EM + G+ VDAVTY  +IDG+C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + GK+ E F +   M +K    NVV+Y  L  GL + G V  A  +   +  K    +  
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LINGLCK G L +A++ + +                  MD+ G K + YT  +++ 
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMID------------------MDEAGLKPDVYTYTTIIG 538

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              Q+ +L+ A  L +EM  KG  PT+V+YN L+NG C   R       ++ MLEK   P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +  TY+ L+   C  K +    ++    L +   P+   YNILI G C A  +++AL  +
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL--RPDIISYNITL 580
           S M ++       +YN L+  L K     +A  ++  + +ERL   PD+ ++ I L
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 27/369 (7%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           GI     + NA++   CR   + E  +L++ +  K   N  SYNIL++ L   G++ +A 
Sbjct: 221 GISPSPESCNAVL---CRL-PLDEAVQLFQELPEK---NTCSYNILLKALCTAGRIKDA- 272

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
              +L  E     D  T+G++++G C    L  AI++L+E+   G               
Sbjct: 273 --HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG+++DA  +V  M  HG  L+A    ++M+GF +   L  A   F EM ++G +   
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y  LINGLC+     EA   ++EM +KG   D +TY++LI+G C+  K+  A  +  +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +QK  TP+V  Y  L  GLC  G V  A +L   M  +    N+ TYN+L++GL K G+
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A+     + E  L+PD+ +Y   +  LC    +  A   L + L +GI PT +T+++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 614 LVRAVMNNG 622
           L+     +G
Sbjct: 571 LMNGFCMSG 579



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 11/234 (4%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           +A L+ R+ ++G   +  +CN+++        L+ A+ LF+E+  K       SYN L+ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEKN----TCSYNILLK 261

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC   R  +A+    EM      PD++TY ++++G C   +++ A+KL  +   +G   
Sbjct: 262 ALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +   Y  +I  LC  G+V DA+++  +M     V +   + T+M G  + GD   A   +
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + + +  L  D ++Y   + GLC    + +A   L +   +G+    +T+ +L+
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 246/512 (48%), Gaps = 50/512 (9%)

Query: 154 ALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           AL + D++  R GV+ +   YN+++    +   +  A  ++ R+V    V P   T+ V 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
              LC+ GR +E L +   M ++    D+  Y + IH LC  G V  A  +  EM+  G 
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC------------------------- 307
             D  T++ ++ G C  G+++E   L + M  KGC                         
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 308 -------LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
                  LNVV +N +I G L  GK+ EA  ++E +  K C  D+ T+ +L++GLCK G 
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           ++ A+++L E+E+ G                  G   D  +L+  M   G  LN+   N 
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++    +  +++ A+ L +EM  +GC+P + SYNT+I  LC  E+  EA    + +LE+G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              + ITY+ +I+ L +  +   A++L  + +  G + DV  YN LI  +C  G V+ +L
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M ++   PN V+YN L+  L K      ALE+   +L + L PDI++YN  + GL
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C    M  A   L       + P  IT++IL+
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/594 (28%), Positives = 274/594 (46%), Gaps = 66/594 (11%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-SRILELIEIQKCYCP 72
           A  +P  AL+L DS    PG+          L R + P   +H+  ++     +Q  +  
Sbjct: 84  AGGDPDRALSLLDSLP--PGFLPLRESLLLPLLRSLPPGRALHLLDQLPRRFGVQPSFRS 141

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFL 123
            +V LSV+    +      AL +++RM            FG  A  LCR  +  +A   L
Sbjct: 142 YNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALL 198

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             +   G  PD   Y TVI+ L   G +  A  + +EM   G   +V  ++ ++ G    
Sbjct: 199 RGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGL 258

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC------------------------ 219
           G    A  + +R+ M     P V+TY  ++ GLC+                         
Sbjct: 259 GRVREAARLVDRM-MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV 317

Query: 220 -------GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
                  G+  E  E+++ M     + D+ TY   +HGLCK G +  A R+ REM + G 
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGF 377

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAIS 331
             + VTY  ++  FC+ G   +   L E M  KG  LN   YN +I  L ++G++DEA+ 
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 437

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + + +R + CN D  ++  +I  LC N  + +A  +   + E  EG +A           
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE--EGVVA----------- 484

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T N++++  ++  + ++A+ L KEM   GCS  VVSYN LI  +CK      
Sbjct: 485 -----NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +   ++EM EKG KP+ ++Y++LI+ LC+ +++  AL+L  Q L +G  PD+  YN LI+
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           GLC  G +  AL L   +   N  P+++TYN L+    K    D A  + N  +
Sbjct: 600 GLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 234/485 (48%), Gaps = 50/485 (10%)

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCS 246
           RA  + ++L     V P+  +YNV+++ L +     + L ++ RM   +R    +FT+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
               LC+ G    A  + R M   G   DAV Y  +I   C  G + E   L   M   G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  +V +++ ++RG+   G+V EA  + + +  K C     T+G L+ GLC+    ++A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 366 QILNEVEE----------GG---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            +L  V E          GG   EG+LA+A  L   M   GC+ +A+T + LM+G  +  
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 413 KLENAIFLFKEMSRKGCSPTVVS-----------------------------------YN 437
           ++ +A+ L +EM +KG +P VV+                                   YN
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I  LCK  R  EA   ++EM  +G  PD+ +Y+ +I  LC +++++ A  +    L++
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   +   YN +IH L   G+ +DA++L   M    C  ++V+YN L+  + K G+ D++
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L +   + E+ ++P+ +SYNI +  LC   R+ DA E     L +G+ P  +T++ L+  
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 618 VMNNG 622
           +   G
Sbjct: 601 LCKMG 605


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 168/605 (27%), Positives = 293/605 (48%), Gaps = 56/605 (9%)

Query: 38  PHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED---VALSVIQAYGKNSM----PD 90
           P LFH    R       + VS I+E ++       ED   V  S I++Y   S+    PD
Sbjct: 19  PTLFHSYHSRTNPIATSIEVSTIIETLDPM-----EDGLKVISSRIRSYTITSVLQEQPD 73

Query: 91  KALDV----------FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
             L              R   +     G L ++  FE   + L  L    +K    ++  
Sbjct: 74  TRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSV 133

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I    ++G    A+  F  M +   + ++  +N+++    +K  ++ A  ++ ++ ++ 
Sbjct: 134 LIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM-LKC 192

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           ++ P+VVTY ++I+GLCK  +  + L ++D M       +   Y   + GLC+A  +  A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
           +R++ +M  SG   D +TYN +++GFC++G + + F L +++ + G  L V+ Y  LI G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L    + +EA   ++ +  +N   D   + ++I GL + G + +A+ +L E+ E G    
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G L +A SL   + KH C  N +T + L+ G  +   +  A  +FK
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP--------------DM 468
           EM + GC P+VV++N+LINGLCK  R  EA     +M E   KP              D+
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-EIVRKPSLFLRLSQGTDKVFDI 491

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +  +++  LC+S  I  A KL  Q +  G  PD+  YNILI+G C  G +  A +L+  
Sbjct: 492 ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+ +  +P+ VTY TL+DGL++ G  + ALEI+  ++++   P+  +Y   +   C  + 
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611

Query: 589 MSDAF 593
           +S A 
Sbjct: 612 ISLAL 616



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 218/464 (46%), Gaps = 67/464 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            ++V+I    + G  ++ +E +  M+  + + D F +   +H L +      A  VY +M
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           ++  +  D VTY  +I G C+  K ++   L++ M  +G L N + Y+I++ GL +  K+
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A  ++  +R   CN D  T+ VL+NG CK+GYL+ A  +L  + + G           
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG----------- 298

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                H   +  Y C  L+NG  +A + E A   +++M R+   P V+ Y  +I GL + 
Sbjct: 299 -----HILGVIGYGC--LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQE 351

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA + + EM E+G +PD I Y+ LI G C    +D A  L  +  +    P+   Y
Sbjct: 352 GRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK---------------- 550
           +ILI G+C  G +  A  ++  M+K  C+P++VT+N+L++GL K                
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEI 471

Query: 551 ----------TGDCDKALEIWN-HILEERL---------------------RPDIISYNI 578
                     +   DK  +I +  ++ ERL                      PDI +YNI
Sbjct: 472 VRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNI 531

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G C    ++ AF+   +   +G +P ++T+  L+  +   G
Sbjct: 532 LINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 249/569 (43%), Gaps = 82/569 (14%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL LFD  T + G   +  ++  +L  L   K +    R+   +    C         ++
Sbjct: 217 ALVLFDEMT-DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 81  QAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
             + K+   D A  + Q + +         +GC    L R R++E+A  +   +  + +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PDV  Y  +I GL + G +  AL +  EM ERG+  + +CYN LI GF   G Y+   E 
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG-YLDEAES 394

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
               + +   +PN  TY+++I G+CK G  ++   ++  M+K        T+ S I+GLC
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 253 KAGNVEGAERVYREM--------------------------------------------- 267
           KA  +E A  ++ +M                                             
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 268 ---VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
              V+SG+  D  TYN +I+GFC+ G I   F+L++ M  KG + + V+Y  LI GL   
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ ++A+ I+E + +K C  +S+T+  ++   C+   ++ A+ +  +      G   +  
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKV 634

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +V                S  N      +L+ AI    EM  K  +  +  Y   + GL
Sbjct: 635 RVV--------------AESFDN-----EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGL 675

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYS--LLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            + +R  EA++    +  K +K ++ + S  +LI  LC  + +DMA+ +    L++GF  
Sbjct: 676 VQAKRDCEAFAIFSVL--KDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRL 733

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMK 530
              + N L+  L    + +DAL L + M+
Sbjct: 734 MPPICNQLLCNLLHLDRKDDALFLANRME 762



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 146/270 (54%), Gaps = 12/270 (4%)

Query: 362 NKAIQILNEV---------EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           N AI+I +E          E G + +  ++ SL+   D   CK + +  N +++  ++  
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD---CKPDLFAFNLILHFLVRKE 177

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
               A+ ++ +M +   +P VV+Y  LI+GLCK  +  +A     EM ++G  P+ I YS
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++++GLCQ+KKI  A +L  +    G   D+  YN+L++G C +G ++DA  L   + K 
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             +  ++ Y  L++GLF+    ++A   +  +L E ++PD++ Y I ++GL    R+++A
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              L +   RG+ P TI ++ L++   + G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMG 387



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 292 IKE-CFEL-WEVMG--RKGCLNVVS--YNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           IKE  FEL W+V+   +   + + S  +++LI    E G  ++A+  + L+R+ +C  D 
Sbjct: 104 IKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDL 163

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA--YTCNS 403
               ++++ L +      A+ + N++ +                    C LN    T   
Sbjct: 164 FAFNLILHFLVRKEAFLLALAVYNQMLK--------------------CNLNPDVVTYGI 203

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +  K ++A+ LF EM+ +G  P  + Y+ +++GLC+ ++  +A     +M   G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D+ITY++L+NG C+S  +D A  L     + G    V  Y  LI+GL  A + E+A 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             Y  M + N  P+++ Y  ++ GL + G   +AL +   + E  LRPD I YN  +KG 
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C    + +A     +       P   T+ IL+  +  NG
Sbjct: 384 CDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNG 422



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 67/367 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM-------- 161
           +C+     KA+     + + G  P V ++ ++INGL K+  L  A  +F +M        
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477

Query: 162 ---FERGVET--NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
                +G +   ++    ++++   + G  ++A ++  +LV ++ V P++ TYN++ING 
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV-DSGVLPDIRTYNILINGF 536

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G  +   +++  M+      DS TY + I GL +AG  E A  ++ +MV+ G   ++
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596

Query: 277 VTYNAMIDGFCRAGKIKECFELW-----------------------------------EV 301
            TY  ++   CR   I     +W                                   E+
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEM 656

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +    ++  Y I + GL++  +  EA +I+ +L++   N  S +  +LI  LC    L
Sbjct: 657 DIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENL 716

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           + A+ +     E                   G +L    CN L+   +   + ++A+FL 
Sbjct: 717 DMAMDVFLFTLE------------------RGFRLMPPICNQLLCNLLHLDRKDDALFLA 758

Query: 422 KEMSRKG 428
             M   G
Sbjct: 759 NRMEASG 765



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 72/146 (49%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           L+I  L +    ++  K+  +            +++LI     AG  E A++ +S M+  
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDF 157

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           +C P+L  +N ++  L +      AL ++N +L+  L PD+++Y I + GLC   +  DA
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 593 FEFLNDALCRGILPTTITWHILVRAV 618
               ++   RGILP  I + I++  +
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGL 243


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 175/625 (28%), Positives = 298/625 (47%), Gaps = 69/625 (11%)

Query: 5   AKRLLN-LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           ++RLL+ LL A   PH A +L D   R    A  P       RR   P +V         
Sbjct: 95  SRRLLSRLLGAGHRPHLAASLVDLLHR-AALALGP-------RRSALPSVV--------- 137

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIF------GCEAGIL--CRKRQ 115
                     D  LS++  +G   + D A+    R+ ++        C   +L   R RQ
Sbjct: 138 ----------DTLLSLLADHG---LLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQ 184

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
               +R  + L      P+V+++  VI+ L K G+L+ A A+F  M   G   +VV YN 
Sbjct: 185 GGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNS 240

Query: 176 LIDGFFKKGDYMRAKEIWERLVME---TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           LIDG+ K GD     E  E+LV E   +    +VVTYN +IN   K GR ++    +  M
Sbjct: 241 LIDGYGKCGDL----EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM 296

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           K+     +  T+ +F+   CK G V+ A +++ +M   G+  +  TY +++DG C+AG++
Sbjct: 297 KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            +   L + M  +G + NVV+Y +++ GL + GKV EA ++  L+      A+   +  L
Sbjct: 357 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTL 416

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+G   N    +A+ +LN+                  M   G +L+     +L+ G  + 
Sbjct: 417 IHGHFMNNNSERALDLLNQ------------------MKNKGMELDVSLYGTLIWGLCKD 458

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K++ A  L  +M+  G  P  V Y T+++ L K  +  EA + + ++L+ G++P+++TY
Sbjct: 459 QKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTY 518

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
             LI+GLC++  I  A+    +  + G  P+V  Y  LI G C  G +  A+ L + M  
Sbjct: 519 CALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID 578

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +    + V Y +L+DG  K  +   A  +   ++E  L+ D+  Y   + G C+ + M +
Sbjct: 579 KGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQE 638

Query: 592 AFEFLNDALCRGILPTTITWHILVR 616
           A   L++ +  GI P    ++ L+R
Sbjct: 639 ARGVLSEMIGTGITPDKTVYNCLIR 663



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 172/338 (50%), Gaps = 24/338 (7%)

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           + G ++  F+L  V       NV ++NI+I  L + G++ EA +++  ++   C+ D  T
Sbjct: 184 QGGLVRRLFDLLPVP------NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVT 237

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G  K G L        EVE+           LV+ M K GC  +  T N+L+N 
Sbjct: 238 YNSLIDGYGKCGDLE-------EVEQ-----------LVSEMRKSGCAADVVTYNALINC 279

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +  ++E A   F EM R+G    VV+++T ++  CK     EA     +M  +G  P+
Sbjct: 280 FSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ L++G C++ ++D A+ L  + + +G  P+V  Y +++ GLC  GKV +A  + S
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M++     N + Y TL+ G F   + ++AL++ N +  + +  D+  Y   + GLC   
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           ++ +A   L+     G+ P T+ +  ++ A+   G  +
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 245/464 (52%), Gaps = 27/464 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G   N V +N L++GF K+G     + + E +     + PNVV+YN ++ GLCK  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLE 59

Query: 221 RFDECLEMWDRM--KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           R+ E  E+   M  +      D  TY + + G CKAG VE +  + +E++  G+  DA+ 
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
           Y  ++   C++ ++ E  EL E M R GC   ++++N LI G      ++ A S+ + + 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
                AD  T+  L++GLCK G L +A Q+L  ++  G                  G++ 
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTL 439
           DA  ++ +M       N  T N++++G  ++ K++ A+ + ++M S  GC   VV Y+T+
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++GLCK+ R  EA S ++ M   G +PD++TYS L+NGLC++ KI+ A++   +   +G 
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNM-----KKRNCVPNLVTYNTLMDGLFKTGDC 554
            P+   Y  L+HGLCS G++ +A ++   M        +C P++ TYN L+ GL K G  
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI 419

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           D AL+ +  +  +   PD +SY+  ++GL    R   A   L++
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSE 463



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 237/437 (54%), Gaps = 27/437 (6%)

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET--NVVCYNILI 177
           +R L ++  + ++P+V SY  ++ GL K      A  +  +M  RG  +  ++V Y+ L+
Sbjct: 30  ERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLL 89

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G+ K G    ++E+ +  V+   + P+ + Y  ++  LCK  R  E LE+ + M +   
Sbjct: 90  SGYCKAGKVEESRELLKE-VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGC 148

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                T+ + I G C+  N+E A+ + ++M  SG+  D VTYN ++DG C+AG+++E  +
Sbjct: 149 CPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L E M   GC  +VV+Y+  + GL ++GKV +A  + E +R+ + + +  T+  +++GLC
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLC 268

Query: 357 KNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNA 398
           K+G ++ A++++ ++                       GR  +A S++  M + GC+ + 
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T +SL+NG  +A K+E A+   +EM+ +GC P  V+Y +L++GLC   R  EA   V+E
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 459 MLEKGW-----KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           M   G       P + TY+ LI GLC++ +ID ALK   +   +G  PD   Y+ ++ GL
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448

Query: 514 CSAGKVEDALQLYSNMK 530
             +G+   A  + S ++
Sbjct: 449 ARSGRALQAEMILSEVR 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 240/467 (51%), Gaps = 35/467 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  AL +  +++        L   +  R I P +V +   +  L ++++ +  E++ 
Sbjct: 9   NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELV 68

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +I + G  S PD  +  +  +   + C+AG      + E+++  L  +  +GL+PD  
Sbjct: 69  RDMI-SRGGRSTPD--MVTYSTLLSGY-CKAG------KVEESRELLKEVISRGLRPDAL 118

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            Y  V+  L KS  L  AL + +EM   G    ++ +N LI G  ++ +   A  + +++
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
              + V  +VVTYN +++GLCK GR  E  ++ +RMK +    D   Y SF++GLCK+G 
Sbjct: 179 AA-SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GC-LNVVSYN 314
           V  A +V  +M +S    + VTYN ++DG C++GKI    E+ E M    GC LNVV Y+
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE-E 373
            ++ GL + G+  EA S+ E +    C  D  T+  L+NGLCK G + +A++ + E+  E
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 374 GGE----------------GRLADAASLVNRMDKHG-----CKLNAYTCNSLMNGFIQAS 412
           G +                GRLA+A  +V  M   G     C  +  T N+L+ G  +A 
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAG 417

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           ++++A+  F+ M  +GC P  VSY+T++ GL +  R  +A   + E+
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 21/377 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           M  +G   ++VT+NA+++GF + G+  +C  L E M  +    NVVSYN L+ GL +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 326 VDEAISIWE--LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
             EA  +    + R      D  T+  L++G CK G + ++ ++L EV   G        
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      RL +A  L+  M + GC     T N+L++G  +   LE A  L ++M+ 
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G    VV+YNTL++GLCK  R  EA   ++ M   G  PD++ YS  + GLC+S K+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVTYNTLM 545
           A ++  Q       P+V  YN ++ GLC +GK++ AL++   M   + C  N+V Y+T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DGL K G   +A  +   +     RPD+++Y+  + GLC   ++ +A E + +    G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T+  LV  + + G
Sbjct: 361 PNAVTYCSLVHGLCSCG 377


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 263/541 (48%), Gaps = 54/541 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    E A   L  + +KG  P   ++ +VI   VK G+++ AL + DEM   GV+ N
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV    L+ G+ K+   + A E ++++  E    PN VTY V+I   CK G   +  +++
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKM-NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 230 DRMK-KN-------------------EREKDS--------------FTYCSFIHGLCKAG 255
            +MK KN                    RE+ S              FTY S +  LCK G
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEG 467

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            +  A  ++++M++ G+    V+YN+MI G CR G +     ++  M   G   NV++Y+
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           IL+ G  +NG  + A  +++ + ++N      T+ + INGLCK                 
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCK----------------- 570

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR ++A  ++ +  + G      T NS+M+GFI+   + +A+  ++EM   G SP V+
Sbjct: 571 -VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVI 629

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y TLING CK      A     EM  KG + D+  Y  LI+G C+ + I+ A  L  + 
Sbjct: 630 TYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L  G +P+  +YN LI G  +   +E AL L   M       +L TY TL+DGL K G  
Sbjct: 690 LDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRL 749

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             AL++++ +  + + PDII Y + + GLC   ++ +A + L +     I P    ++ L
Sbjct: 750 VLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809

Query: 615 V 615
           +
Sbjct: 810 I 810



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 273/564 (48%), Gaps = 33/564 (5%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDV--ALSVIQAYGKNS 87
           R+ G+  S   F  ++   +    +V   R+ +  E+  C    +V  A ++++ Y K  
Sbjct: 306 RDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD--EMVSCGVQMNVVVATTLVKGYCKQD 363

Query: 88  MPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
               AL+ F +MNE         +       C+     KA      +  K + P V+   
Sbjct: 364 KLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           ++I G +K      A  +FDE     +  N+  YN L+    K+G    A  +W+++ ++
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKM-LD 481

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + P  V+YN MI G C+ G  D    ++  M     + +  TY   + G  K G+ E 
Sbjct: 482 KGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEY 541

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIR 318
           A  V+  MV+  I     TYN  I+G C+ G+  E  ++ +    KG + V ++YN ++ 
Sbjct: 542 AFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMD 601

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G ++ G V  A++ +  + E   + +  T+  LING CKN   + A+++ NE        
Sbjct: 602 GFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE-------- 653

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                     M   G +L+     +L++GF +   +E A +LF E+   G SP  V YN+
Sbjct: 654 ----------MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNS 703

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+G   +     A +  K ML +G   D+ TY+ LI+GL +  ++ +AL L  +   KG
Sbjct: 704 LISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKG 763

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+ +Y +LI+GLC  G++E+A ++ + M++ +  PN+  YN L+ G FK G+  +A 
Sbjct: 764 IIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAF 823

Query: 559 EIWNHILEERLRPDIISYNITLKG 582
            + N +L++ L P+  +Y+I + G
Sbjct: 824 RLHNEMLDKGLTPNDTTYDILING 847



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 249/587 (42%), Gaps = 88/587 (14%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            N L E  + P +     ++  LVK+  +  A  V+++M  +GV  +    +I++    K
Sbjct: 197 FNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLK 256

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             +   AK+ +        V  +   Y+++I   CK    +    +   M+         
Sbjct: 257 DNNEEEAKKFFLE-AKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+ S I    K GN+  A R+  EMV  G+ ++ V    ++ G+C+  K+    E ++ M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKN--------------------- 340
              G   N V+Y +LI    +NG + +A  ++  ++ KN                     
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 341 ------------CN-ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
                       C+ A+  T+  L++ LCK G +++A  +  ++ + G            
Sbjct: 436 EEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMI 495

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                +G L  AAS+ + M   G K N  T + LM+G+ +    E A ++F  M  +   
Sbjct: 496 LGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIV 555

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-------------------------- 464
           P+  +YN  INGLCKV R  EA   +K+ +EKG+                          
Sbjct: 556 PSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTA 615

Query: 465 ---------KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
                     P++ITY+ LING C++   D+ALK+  +   KG   D+  Y  LI G C 
Sbjct: 616 YREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCK 675

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
              +E A  L+S +      PN V YN+L+ G     + + AL +   +L E +  D+ +
Sbjct: 676 KQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQT 735

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           Y   + GL    R+  A +  ++   +GI+P  I + +L+  +   G
Sbjct: 736 YTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 224/509 (44%), Gaps = 65/509 (12%)

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
            +G+   FD       ++++  YN L++ + K      A   + RLV E+ + P +   N
Sbjct: 161 FIGSTKRFD------FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLV-ESDIVPWIKFLN 213

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            ++  L K     E  E++++M       D FT    +    K  N E A++ + E    
Sbjct: 214 FLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSR 273

Query: 271 GIFVDAVTYNAMIDGFC-----------------------------------RAGKIKEC 295
           G+ +DA  Y+ +I  FC                                   + G + E 
Sbjct: 274 GVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEA 333

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L + M   G  +NVV    L++G  +  K+  A+  ++ + E   + +  T+ VLI  
Sbjct: 334 LRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEW 393

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL------------------ 396
            CKNG + KA  +  +++      +     +VN + +   K+                  
Sbjct: 394 CCKNGNMAKAYDLYTQMKNKN---ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI 450

Query: 397 -NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N +T NSL++   +  K+  A  L+++M  KG +PT VSYN++I G C+      A S 
Sbjct: 451 ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASV 510

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
             +ML+ G KP++ITYS+L++G  ++   + A  +  + + +   P    YNI I+GLC 
Sbjct: 511 FSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCK 570

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G+  +A  +     ++  VP  +TYN++MDG  K G    AL  +  + E  + P++I+
Sbjct: 571 VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVIT 630

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           Y   + G C  +    A +  N+   +G+
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRNKGL 659



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 215/491 (43%), Gaps = 37/491 (7%)

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW-ERLVMETSV 202
           G V+S   L +L V   +  R  ET     N+L    F  GD      I  +  +  T  
Sbjct: 113 GFVRS---LDSLCVLLHILTRSSETLKQAQNLL--NRFISGDSGPMPNILVDHFIGSTKR 167

Query: 203 Y---PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH----GLCKAG 255
           +    ++  YN ++N   K  + ++ +  ++R+     E D   +  F++     L K  
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRL----VESDIVPWIKFLNFLLTALVKND 223

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYN 314
            +  A  VY +MV  G+  D  T + M+    +    +E  + + E   R   L+  +Y+
Sbjct: 224 MIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYS 283

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           I+I+   +N  V+ A  + + +R+K       T   +I    K                 
Sbjct: 284 IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVK----------------- 326

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            +G + +A  L + M   G ++N     +L+ G+ +  KL +A+  F +M+  G SP  V
Sbjct: 327 -QGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRV 385

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  LI   CK     +AY    +M  K   P +   + LI G  + +  + A KL  + 
Sbjct: 386 TYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEA 445

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +      ++  YN L+  LC  GK+ +A  L+  M  +   P  V+YN+++ G  + G+ 
Sbjct: 446 VACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D A  +++ +L+  L+P++I+Y+I + G         AF   +  +   I+P+  T++I 
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 615 VRAVMNNGAST 625
           +  +   G ++
Sbjct: 565 INGLCKVGRTS 575



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           ALD++  M+         I+      LC K Q E A++ L  +    + P+V  Y  +I 
Sbjct: 752 ALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIA 811

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           G  K+G+L  A  + +EM ++G+  N   Y+ILI+G  K G+
Sbjct: 812 GHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 183/664 (27%), Positives = 310/664 (46%), Gaps = 67/664 (10%)

Query: 17  NPHTALALFDSATREPGYAHS----PHL--FHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           NP+ A  LF      P  A S    P L     I R LI  K+   +  + +L+  Q   
Sbjct: 19  NPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRD 78

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRK----RQFEKAKRFLNSL 126
                  S+++      + + A+  F+ + + F  +   +       R   K  R    +
Sbjct: 79  FAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 127 W------EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           W         +KP  Y++  +I+ L + G L  A  VFD+M E+G + N     IL+ G+
Sbjct: 139 WLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + G +    ++ + +   +   PN V YN +I+ LC  G+  E  ++ ++M++     D
Sbjct: 199 CRAGLHSHGIDLLDEM-RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMV---ESGIF-VDAVTYNAMIDGFCRAGKIKECF 296
             T+   I  LCK+G +  A R++R+M    E G+   + VTYN M++GFC  G  +E  
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 297 ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
            +++ M     L++ SYNI + GL+ +GK+ EA  I   + EKN   +  ++ +L++GLC
Sbjct: 318 AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           K G  + A  IL  + E G                  G++ +A  ++  M + GC  N Y
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TCN L++   +  +   A  L + M+ +G     V+ NT+INGLCK     +A   V  M
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 460 LEKGWK-----------------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             +G                         PD ITY+ +I GLC+  ++D A K   + + 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           K  +PD  +++  I+  C  GK+  A ++   M+K+ C  +L TYN+L+ GL   G  ++
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL---GSENQ 614

Query: 557 ALEIWNHILEERLR---PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             EI+  + E + R   P++ +YN  +  L    ++ DA   L++ L +GI P   T+ I
Sbjct: 615 IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRI 674

Query: 614 LVRA 617
           L+ A
Sbjct: 675 LIGA 678



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 256/556 (46%), Gaps = 47/556 (8%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           D A+   +     F      LC     E A+   + + EKG KP+ +S G ++ G  ++G
Sbjct: 143 DMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAG 202

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
                + + DEM   G   N V YN +I     +G  + A+++ E++  E  + P++VT+
Sbjct: 203 LHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM-REVGLSPDIVTF 261

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNER----EKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           N  I  LCK G+  E   ++  M+ +E     + ++ TY   + G C  G  E A  ++ 
Sbjct: 262 NCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFD 321

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
            M  S   +   +YN  + G  R+GK+ E   +   M  K    N+ SYNIL+ GL + G
Sbjct: 322 SMKNSET-LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYG 380

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
              +A SI  L+RE     D+ T+  L++G C+ G + +A  +L E+ + G         
Sbjct: 381 MFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCN 440

Query: 376 --------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   EGR ++A  L+  M++ G  L+  TCN+++NG  +A  L+ AI +   M  +
Sbjct: 441 ILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTR 500

Query: 428 G-----------------------CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           G                       C P  ++Y T+I GLCKV R  EA   + EM+ K  
Sbjct: 501 GSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKL 560

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD + +   I   C+  K+  A ++  +  +KG    +  YN LI GL S  ++ +   
Sbjct: 561 SPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   MK+R   PN+ TYN ++  L + G    A  + + +L++ + P+I ++ I +    
Sbjct: 621 LMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFF 680

Query: 585 SCSRMSDAFEFLNDAL 600
                  A E    AL
Sbjct: 681 KACDFGAAQELFEIAL 696



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 271/616 (43%), Gaps = 121/616 (19%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P + +L + ++ Y +  +    +D+   M           +      LC + Q  +A++ 
Sbjct: 186 PNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKL 245

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF---ERGV-ETNVVCYNILID 178
           +  + E GL PD+ ++   I  L KSG +L A  +F +M    E G+ + N V YN++++
Sbjct: 246 VEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLE 305

Query: 179 GFFKKGDYMRAKEIWERL---------------------------------VMETSVYPN 205
           GF  +G +  A+ I++ +                                 + E ++ PN
Sbjct: 306 GFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           + +YN++++GLCK G F +   +   M+++    D+ TY + +HG C+ G +  A  V R
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG 324
           EM++ G F +  T N ++    + G+  E  +L ++M  +G  L+ V+ N +I GL + G
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAG 485

Query: 325 KVDEAISI----W---------------ELLREKN----CNADSTTHGVLINGLCKNGYL 361
            +D+AI I    W               +L   +N    C  DS T+  +I GLCK G +
Sbjct: 486 NLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545

Query: 362 NKAIQILNEV-----------------EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           ++A + L E+                     +G+L+ A  ++  M+K GC  +  T NSL
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G    +++     L  EM  +G  P V +YN +I+ L +  +  +A   + EML+KG 
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGI 665

Query: 465 KPDMITYSLLINGLCQS-------KKIDMALKLCC-----------QFLQKGFTPDVT-- 504
            P++ T+ +LI    ++       +  ++AL LC            + L  G T      
Sbjct: 666 SPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 505 --------------MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                         +Y  LI  LC  GK++DA  +   M  +    +  ++  ++D L K
Sbjct: 726 FEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGK 785

Query: 551 TGDCDKALEIWNHILE 566
            G    A E    ++E
Sbjct: 786 RGSKHAADEFAERMME 801



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 56/351 (15%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN+L R  L+  +VD  I +++ +        + T  +LI+ LC+ GYL  A ++ +   
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFD--- 177

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                          +M + GCK N ++   L+ G+ +A    + I L  EM   G  P 
Sbjct: 178 ---------------KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPN 222

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+YNT+I+ LC   +  EA   V++M E G  PD++T++  I  LC+S +I  A ++  
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282

Query: 493 QFL---QKGFT-PDVTMYNILIHGLCSAGKVEDALQLYSNMK------------------ 530
                 + G   P+   YN+++ G CS G  E+A  ++ +MK                  
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLV 342

Query: 531 ----------------KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
                           ++N  PNL +YN L+ GL K G    A  I   + E  + PD +
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +Y+  L G C   ++ +A   L + +  G  P   T +IL+ ++   G ++
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 71/157 (45%)

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P +  Y+LL     +  ++D  + L          P    +N+LI  LC  G +E+A ++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M ++ C PN  +   L+ G  + G     +++ + +      P+ ++YN  +  LC 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +  +A + +      G+ P  +T++  + A+  +G
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSG 272


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 267/542 (49%), Gaps = 28/542 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +    +          + + + +       + +   G+ P++Y+   +
Sbjct: 41  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 100

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN       L  A +V  ++ + G + N+  +N LI G   +G       ++++++ E  
Sbjct: 101 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE-G 159

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVTY  +INGLCK G     + +   M++   + D   Y S I  LCK   V  A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ EM+  GI     TYN++I   C   + K    L  E++  K   NVV ++ ++  L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + GKV EA  + +++ ++    +  T+  L++G C    +++A+++ +           
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT---------- 329

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   G   +  + ++L+NG+ +  ++E A++LF+EM RK   P  V+Y+TL+
Sbjct: 330 --------MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC V R  +A +   EM+ +G  PD ++Y +L++ LC+++++D A+ L          
Sbjct: 382 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +Y I+I G+C AG++E A  L+SN+  +   PN+ TY  +++GL + G   +A ++
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  +   P+  +YN+  +G    +      + L + L RG      T  +LV  + +
Sbjct: 502 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 561

Query: 621 NG 622
           +G
Sbjct: 562 DG 563



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 251/507 (49%), Gaps = 20/507 (3%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A    N +      P +  +  ++  + K       L++  +M   G+  N+   NI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+ F        A  +  + +++    PN+ T+N +I GLC  G+  E L ++D+M   
Sbjct: 100 LINSFCHLQRLGFAFSVLAK-ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +  TY + I+GLCK G+   A R+ R M +     D V Y ++ID  C+  ++ + 
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F L+  M  +G   ++ +YN LI  L    +     ++   +       +      +++ 
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK                  EG++ +A  +V+ M K G + N  T N+LM+G    S++
Sbjct: 279 LCK------------------EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ +F  M  KG +P VVSY+TLING CK++R  +A    +EM  K   P+ +TYS L
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++GLC   ++  A+ L  + + +G  PD   Y IL+  LC   ++++A+ L   ++  N 
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P++  Y  ++DG+ + G+ + A ++++++  + L P++ +Y I + GLC    +++A +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 595 FLNDALCRGILPTTITWHILVRAVMNN 621
              +   +G  P   T++++ R  + N
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRN 527



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 218/433 (50%), Gaps = 20/433 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+      A R L S+ +   +PDV  Y ++I+ L K   +  A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            +F EM  +G+  ++  YN LI       ++     +   +V  + + PNVV ++ +++ 
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDA 278

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G+  E  ++ D M K   E +  TY + + G C    ++ A +V+  MV  G   D
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            V+Y+ +I+G+C+  +I++   L+E M RK  + N V+Y+ L+ GL   G++ +AI+++ 
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  +    D  ++ +L++ LCKN  L++AI +L  +E              + MD    
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG-------------SNMDP--- 442

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
            +  YT   +++G  +A +LE A  LF  +S KG  P V +Y  +INGLC+     EA  
Sbjct: 443 DIQIYTI--VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              EM  KG+ P+  TY+L+  G  ++ +    ++L  + L +GF+ DV+   +L+  L 
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 560

Query: 515 SAGKVEDALQLYS 527
             G  +   Q+ S
Sbjct: 561 DDGLDQSVKQILS 573



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 223/493 (45%), Gaps = 55/493 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C  ++   A   L  + + G +P++ ++ T+I GL   G +   L +FD+M   G + N
Sbjct: 104 FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G    A  +  R + + +  P+VV Y  +I+ LCK  +  +   ++
Sbjct: 164 VVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M         FTY S IH LC     +    +  EMV S I  + V ++ ++D  C+ 
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  ++ ++M ++G   NVV+YN L+ G     ++DEA+ +++ +  K    D  ++
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   + KA+ +  E                  M +     N  T ++LM+G 
Sbjct: 343 STLINGYCKIQRIEKAMYLFEE------------------MCRKELIPNTVTYSTLMHGL 384

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK----------- 457
               +L++AI LF EM  +G  P  VSY  L++ LCK  R  EA + +K           
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444

Query: 458 ------------------------EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
                                    +  KG  P++ TY+++INGLCQ   +  A KL  +
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             +KG++P+   YN++  G     +    +QL   M  R    ++ T   L++ L   G 
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 564

Query: 554 CDKALEIWNHILE 566
                +I +  L+
Sbjct: 565 DQSVKQILSEFLQ 577



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 122/244 (50%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +      L+    +       + L  +M   G  P + + N 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C ++R G A+S + ++L+ G +P++ T++ LI GLC   KI   L L  + + +G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + P I +YN  +  LC+          LN+ +   I+P  + +  +V A+
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 619 MNNG 622
              G
Sbjct: 280 CKEG 283



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 28/142 (19%), Positives = 57/142 (40%)

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D AL    + L     P +  +  L+  +         L L   M      PN+ T N 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L++          A  +   IL+   +P+I ++N  ++GLC   ++ +     +  +  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 604 ILPTTITWHILVRAVMNNGAST 625
             P  +T+  L+  +   G+++
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTS 181


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 259/528 (49%), Gaps = 53/528 (10%)

Query: 63  LIEIQKC--YCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
           L EI++C      D    +IQAY K  M +KA++ F+ M + F C+  +         + 
Sbjct: 114 LKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKD-FDCKPDVFTYNTVLHVMV 172

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RK     A    N + +    P++ ++  +I+G+ KSG    AL +FDEM +R +  N +
Sbjct: 173 RKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI 232

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVY---PNVVTYNVMINGLCKCGRFDECLEM 228
            Y I+I G  +     +  ++  RL +    +   P+ VTYN +++G CK GR DE L +
Sbjct: 233 TYTIIISGLCQA----QKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGL 288

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
               +K+    D   Y   I GL +A   E A+  YR+M E  I  D + Y  M+ G  +
Sbjct: 289 LKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSK 348

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AGK K+   L   M  +G + +   YN LI+G  + G +DEA S+   + + +C + + T
Sbjct: 349 AGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACT 408

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +LI G+C++G +  A QI NE                  M+KHGC  +  T N+L++G
Sbjct: 409 YTILICGMCRSGLVGDAQQIFNE------------------MEKHGCYPSVVTFNALIDG 450

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTV--------------VSYNTLINGLCKVERFGEAY 453
           F +A  +E A  LF +M   G +P++               S  T++  LC      +AY
Sbjct: 451 FCKAGNIEKAQLLFYKME-IGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY 509

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           + + ++ + G+ P++ITY++LI+G C++  I+ A KL  +   KG +PD   Y  LI+GL
Sbjct: 510 NILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGL 569

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            SA + EDA  +   + K  C P    Y + M    +      A  +W
Sbjct: 570 LSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLW 617



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 224/468 (47%), Gaps = 37/468 (7%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           V +N++ID   K   +   +  W+ L  +       +   + V+I    K    ++ +E 
Sbjct: 92  VSHNMIIDMLIKDNGF---ELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVES 148

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++ MK  + + D FTY + +H + +   V  A  +Y  M++     +  T++ +IDG C+
Sbjct: 149 FEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCK 208

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +GK +   ++++ M ++  L N ++Y I+I GL +  K D A  ++  +++  C  DS T
Sbjct: 209 SGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L++G CK G +++A+ +L   E+                D++      Y+C  L++G
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEK----------------DRYVLDKQGYSC--LIDG 310

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A + E+A   +++M+     P V+ Y  ++ GL K  +F +A   + EM E+G  PD
Sbjct: 311 LFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPD 370

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y+ LI G C    +D A  L  +  +         Y ILI G+C +G V DA Q+++
Sbjct: 371 THCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFN 430

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW-------NHILEERLRP------DII 574
            M+K  C P++VT+N L+DG  K G+ +KA  ++       N  L  RL        D  
Sbjct: 431 EMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTA 490

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           S    ++ LC    +  A+  L      G  P  IT++IL+      G
Sbjct: 491 SLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAG 538



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 212/488 (43%), Gaps = 101/488 (20%)

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           K  R +   ++   I  L K    E   +V +E+   G  + A  +  +I  + +   I+
Sbjct: 84  KFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIE 143

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +  E +E+M    C  +V +YN ++  ++    V  A+ I+  + + NC  +  T  +LI
Sbjct: 144 KAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILI 203

Query: 353 NGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAA-SLVNRMDKHGCK 395
           +G+CK+G    A+Q+ +E+ +                  + + AD A  L   M  HGC 
Sbjct: 204 DGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCI 263

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            ++ T N+L++GF +  +++ A+ L K   +         Y+ LI+GL +  RF +A  +
Sbjct: 264 PDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVW 323

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN-------- 507
            ++M E   KPD+I Y++++ GL ++ K   AL+L  +  ++G  PD   YN        
Sbjct: 324 YRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCD 383

Query: 508 ---------------------------ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
                                      ILI G+C +G V DA Q+++ M+K  C P++VT
Sbjct: 384 LGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVT 443

Query: 541 YNTLMDGLFKTGD-------------------------------------------CD-- 555
           +N L+DG  K G+                                           CD  
Sbjct: 444 FNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG 503

Query: 556 ---KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              KA  I   + +    P+II+YNI + G C    ++ AF+   +   +G+ P ++T+ 
Sbjct: 504 LILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYG 563

Query: 613 ILVRAVMN 620
            L+  +++
Sbjct: 564 TLINGLLS 571


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 261/562 (46%), Gaps = 63/562 (11%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F       C+  + E+A +  + + E G+ P+V ++ TVI+GL   G    A    ++M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 162 FERGVETNVVCYNILIDGFFKK---GD-YMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            ERG+E  ++ Y+IL+ G  +    GD Y   KE+ ++        PNV+ YN +I+   
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-----GFPPNVIVYNNLIDSFI 389

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           + G  ++ +E+ D M        S TY + I G CK G  + AER+ +EM+  G  V+  
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449

Query: 278 TYNA-----------------------------------MIDGFCRAGKIKECFELWEVM 302
           ++ +                                   +I G C+ GK  +  ELW   
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG  ++  + N L+ GL E GK+DEA  I + +  + C  D  ++  LI+G C    L
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A   L+E                  M K G K + YT + L+ G    +K+E AI  +
Sbjct: 570 DEAFMFLDE------------------MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +  R G  P V +Y+ +I+G CK ER  E   F  EM+ K  +P+ + Y+ LI   C+S
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++ MAL+L      KG +P+   Y  LI G+    +VE+A  L+  M+     PN+  Y
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+DG  K G   K   +   +  + + P+ I+Y + + G      +++A   LN+   
Sbjct: 732 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791

Query: 602 RGILPTTITWHILVRAVMNNGA 623
           +GI+P +IT+   +   +  G 
Sbjct: 792 KGIVPDSITYKEFIYGYLKQGG 813



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 253/508 (49%), Gaps = 20/508 (3%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  KG+ P   +   ++  LV++ +       FD +  +GV  +V  +   I+ F K G 
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 288

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A +++ ++  E  V PNVVT+N +I+GL  CGR+DE     ++M +   E    TY 
Sbjct: 289 VEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 347

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GL +A  +  A  V +EM + G   + + YN +ID F  AG + +  E+ ++M  K
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G  L   +YN LI+G  +NG+ D A  + + +     N +  +   +I  LC +   + A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467

Query: 365 IQILNEV----EEGGEGRLADAASLVNRMDKH-------------GCKLNAYTCNSLMNG 407
           ++ + E+       G G L    S + +  KH             G  ++  T N+L++G
Sbjct: 468 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A KL+ A  + KE+  +GC    VSYNTLI+G C  ++  EA+ F+ EM+++G KPD
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TYS+LI GL    K++ A++      + G  PDV  Y+++I G C A + E+  + + 
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  +N  PN V YN L+    ++G    ALE+   +  + + P+  +Y   +KG+   S
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 707

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A     +    G+ P    +  L+
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALI 735



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 7/165 (4%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ---KGFTPDVTMYNILIHGLCSAGK 518
           KG  P   T ++L+  L ++ +     + CC+      KG +PDV ++   I+  C  GK
Sbjct: 233 KGMFPSKTTCNILLTSLVRANE----FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGK 288

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE+A++L+S M++    PN+VT+NT++DGL   G  D+A      ++E  + P +I+Y+I
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +KGL    R+ DA+  L +   +G  P  I ++ L+ + +  G+
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 263/529 (49%), Gaps = 46/529 (8%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
           +++S +    KN +P  ++      N++ G              A    NSL  +     
Sbjct: 22  ISISFLILLQKNFIPYSSISTTFHSNDVDG--------------AVSLFNSLLHQNPTLT 67

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            + +  ++  LVKS      L++  +M   G+  N V +NILI+ F + G    A  +  
Sbjct: 68  AFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLA 127

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           + +++    P+++T N  I G C  G+  + L   D++       D  +Y + I+GLCK 
Sbjct: 128 K-ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV 186

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSY 313
           G    A ++ R +    + ++AV YN +IDG  +   + + F+L+ E++ ++   +VV+Y
Sbjct: 187 GETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTY 246

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           + LIRG    GK+ +AI ++  +  +N   D  T  +L++G CK                
Sbjct: 247 SALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK---------------- 290

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EGRL  A ++++ M     K N  T N+L++GF +  K++    +F  M ++G  P V
Sbjct: 291 --EGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y +L++G C V++  +A      M ++G   ++ +Y+++ING C+ KK+D A+KL  +
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              K   PDV  YN LI GLC +GK+  A QL + M  R   PN++TYN++++ L     
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL----- 463

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
                     + ++ ++P++ +  I +KGLC   ++  A +   D L +
Sbjct: 464 -------LTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 243/482 (50%), Gaps = 32/482 (6%)

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+    S D+ GA+++F+ +  +        +N ++    K   Y     + +++  E  
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFE-G 98

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PN VT+N++IN  C+ G       +  ++ K   E D  T  +FI G C  G +  A 
Sbjct: 99  INPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQAL 158

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGL 320
             + ++V  G  +D V+Y  +I+G C+ G+ +   +L   V G+   LN V YN +I G+
Sbjct: 159 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGM 218

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++  V++A  ++  +  K  + D  T+  LI G                      G+L 
Sbjct: 219 SKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFI------------------VGKLK 260

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  L N+M     K + YT N L++GF +  +L+ A  +   M  +   P V ++NTL+
Sbjct: 261 DAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV 320

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  E  +    M+++G KP+++TY  L++G C  K+++ A K+     Q+G T
Sbjct: 321 DGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 380

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            +V  YNI+I+G C   KV+ A++L+  M  ++ +P++VTYN+L+DGL K+G    A ++
Sbjct: 381 ANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQL 440

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            N + +    P+II+YN  L  L   +++ D          +GI P   T  IL++ +  
Sbjct: 441 VNEMHDRGQPPNIITYNSILNAL--LTKLKD----------QGIQPNMHTDTILIKGLCQ 488

Query: 621 NG 622
           +G
Sbjct: 489 SG 490


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 250/548 (45%), Gaps = 85/548 (15%)

Query: 154 ALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           AL + D++  R  V  +   YN ++  F +   +     ++ R+V    V P   T+++ 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
              LC+ GR DE L M   M ++    D+  Y + IH LC  G V  A  +  EM   G 
Sbjct: 179 ARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL----------- 320
             D  T+N ++ G C  G+++E   L + M  +GC+ N ++Y  L++GL           
Sbjct: 239 SADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEART 298

Query: 321 --------------------LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
                               L +GK+ EA  ++E +  K C  D+ T+ +LI+GLCK G 
Sbjct: 299 MLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGR 358

Query: 361 LNKAIQILNEVEEGG----------------------------------------EG--- 377
           L  A+++L E+E+ G                                        EG   
Sbjct: 359 LGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNG 418

Query: 378 ---------RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R+ DA   +  M   G K +  T N+++      +++E A +LF+ +  +G
Sbjct: 419 MICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEG 478

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
                ++YNTLI+ L +   + +A S   +M+  G   D+++Y+ LI  LC+   +D ++
Sbjct: 479 VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI 538

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  +  +KG  P+   YN+LI  LC   +V DAL+L   M  +   P++VTYNTL++GL
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G    AL +   +  E +  DII+YNI +   C    + DA   LN A+  GI P  
Sbjct: 599 CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNE 658

Query: 609 ITWHILVR 616
            TW I+V+
Sbjct: 659 RTWGIMVQ 666



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 236/531 (44%), Gaps = 59/531 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +V+ A+ +       L +++RM            F   A  LCR  + ++A   L S+  
Sbjct: 141 TVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMAR 200

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G  PD   Y TVI+ L   G +  A  + DEMF  G   +V  +N ++ G    G    
Sbjct: 201 HGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLRE 260

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLC----------------------------KC- 219
           A  + +R+++   V PN +TY  ++ GLC                            +C 
Sbjct: 261 AARLVDRMMIRGCV-PNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCL 319

Query: 220 --GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
             G+  E  E+++ M       D+ TY   IHGLCK G +  A ++ REM + G     V
Sbjct: 320 LDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIV 379

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELL 336
           TY  ++  FCR G       + EVM  KG  +N+  YN +I  + ++ ++D+A+   + +
Sbjct: 380 TYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEM 439

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQIL-NEVEEG----------------GEGRL 379
           + +    D  T+  +I  LC N  + +A  +  N + EG                  G  
Sbjct: 440 KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSW 499

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            DA SL N M  HGC L+  + N L+    +   ++ +I L  EM+ KG  P  VSYN L
Sbjct: 500 QDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLL 559

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+ LCK  R  +A    KEML +   PD++TY+ LINGLC+   +  AL L  +   +  
Sbjct: 560 ISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDV 619

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             D+  YNILI   C A  + DA  L +        PN  T+  ++    +
Sbjct: 620 HADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 201/450 (44%), Gaps = 59/450 (13%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+   F+     RA  + ++L    +V P+  +YN ++    +     + L ++ RM   
Sbjct: 106 LLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRM--- 162

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                                      V+R+ V    F    T++      CR G+  E 
Sbjct: 163 ---------------------------VHRDRVPPTTF----TFSIAARALCRLGRADEA 191

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             +   M R GC+ + V Y  +I  L   G V+EA ++ + +    C+AD  T   +++G
Sbjct: 192 LTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHG 251

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC                    GRL +AA LV+RM   GC  NA T   L+ G   AS++
Sbjct: 252 LCT------------------LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE-RFGEAYSFVKEMLEKGWKPDMITYSL 473
           E A    + M  +     VV +NT+I G C ++ +  EA    + M  KG  PD  TYS+
Sbjct: 294 EEA----RTMLGRVPELNVVLFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSI 348

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+GLC+  ++  A+KL  +   KGF P +  Y IL+H  C  G  ++   +   M  + 
Sbjct: 349 LIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              NL  YN ++  + K    D A+     +  +  +PDI +YN  +  LC+ ++M +A 
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE 468

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGA 623
               + L  G++   IT++ L+ A++ NG+
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGS 498



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 157/351 (44%), Gaps = 54/351 (15%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + ++A     ++  KG  PD ++Y  +I+GL K G L  A+ +  EM ++G   ++V Y 
Sbjct: 323 KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYT 382

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           IL+  F + G +   + + E ++ +  +  N+  YN MI  +CK  R D+ +     MK 
Sbjct: 383 ILLHSFCRNGMWDNIRAMLE-VMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + D  TY + I+ LC    +E AE ++  ++  G+  +A+TYN +I    R G  ++
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQD 501

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC------------ 341
              L   M   GC L++VSYN LI+ L  +G VD +I +   + EK              
Sbjct: 502 AISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLIS 561

Query: 342 -----------------------NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
                                    D  T+  LINGLCK G+++ A+ +L ++       
Sbjct: 562 ELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHA 621

Query: 376 -------------EGRL-ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
                        + RL  DA+ L+NR    G   N  T   ++  F++ S
Sbjct: 622 DIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 267/542 (49%), Gaps = 28/542 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +    +          + + + +       + +   G+ P++Y+   +
Sbjct: 50  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 109

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN       L  A +V  ++ + G + N+  +N LI G   +G       ++++++ E  
Sbjct: 110 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE-G 168

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVTY  +INGLCK G     + +   M++   + D   Y S I  LCK   V  A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ EM+  GI     TYN++I   C   + K    L  E++  K   NVV ++ ++  L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + GKV EA  + +++ ++    +  T+  L++G C    +++A+++ +           
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT---------- 338

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   G   +  + ++L+NG+ +  ++E A++LF+EM RK   P  V+Y+TL+
Sbjct: 339 --------MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC V R  +A +   EM+ +G  PD ++Y +L++ LC+++++D A+ L          
Sbjct: 391 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 450

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +Y I+I G+C AG++E A  L+SN+  +   PN+ TY  +++GL + G   +A ++
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  +   P+  +YN+  +G    +      + L + L RG      T  +LV  + +
Sbjct: 511 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 570

Query: 621 NG 622
           +G
Sbjct: 571 DG 572



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 251/507 (49%), Gaps = 20/507 (3%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A    N +      P +  +  ++  + K       L++  +M   G+  N+   NI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+ F        A  +  + +++    PN+ T+N +I GLC  G+  E L ++D+M   
Sbjct: 109 LINSFCHLQRLGFAFSVLAK-ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +  TY + I+GLCK G+   A R+ R M +     D V Y ++ID  C+  ++ + 
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F L+  M  +G   ++ +YN LI  L    +     ++   +       +      +++ 
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK                  EG++ +A  +V+ M K G + N  T N+LM+G    S++
Sbjct: 288 LCK------------------EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ +F  M  KG +P VVSY+TLING CK++R  +A    +EM  K   P+ +TYS L
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++GLC   ++  A+ L  + + +G  PD   Y IL+  LC   ++++A+ L   ++  N 
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P++  Y  ++DG+ + G+ + A ++++++  + L P++ +Y I + GLC    +++A +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 595 FLNDALCRGILPTTITWHILVRAVMNN 621
              +   +G  P   T++++ R  + N
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRN 536



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 218/433 (50%), Gaps = 20/433 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+      A R L S+ +   +PDV  Y ++I+ L K   +  A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            +F EM  +G+  ++  YN LI       ++     +   +V  + + PNVV ++ +++ 
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDA 287

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G+  E  ++ D M K   E +  TY + + G C    ++ A +V+  MV  G   D
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            V+Y+ +I+G+C+  +I++   L+E M RK  + N V+Y+ L+ GL   G++ +AI+++ 
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  +    D  ++ +L++ LCKN  L++AI +L  +E              + MD    
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG-------------SNMDP--- 451

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
            +  YT   +++G  +A +LE A  LF  +S KG  P V +Y  +INGLC+     EA  
Sbjct: 452 DIQIYTI--VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              EM  KG+ P+  TY+L+  G  ++ +    ++L  + L +GF+ DV+   +L+  L 
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 569

Query: 515 SAGKVEDALQLYS 527
             G  +   Q+ S
Sbjct: 570 DDGLDQSVKQILS 582



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 223/493 (45%), Gaps = 55/493 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C  ++   A   L  + + G +P++ ++ T+I GL   G +   L +FD+M   G + N
Sbjct: 113 FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 172

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G    A  +  R + + +  P+VV Y  +I+ LCK  +  +   ++
Sbjct: 173 VVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M         FTY S IH LC     +    +  EMV S I  + V ++ ++D  C+ 
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  ++ ++M ++G   NVV+YN L+ G     ++DEA+ +++ +  K    D  ++
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   + KA+ +  E                  M +     N  T ++LM+G 
Sbjct: 352 STLINGYCKIQRIEKAMYLFEE------------------MCRKELIPNTVTYSTLMHGL 393

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK----------- 457
               +L++AI LF EM  +G  P  VSY  L++ LCK  R  EA + +K           
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453

Query: 458 ------------------------EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
                                    +  KG  P++ TY+++INGLCQ   +  A KL  +
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             +KG++P+   YN++  G     +    +QL   M  R    ++ T   L++ L   G 
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 573

Query: 554 CDKALEIWNHILE 566
                +I +  L+
Sbjct: 574 DQSVKQILSEFLQ 586



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 122/244 (50%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +      L+    +       + L  +M   G  P + + N 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C ++R G A+S + ++L+ G +P++ T++ LI GLC   KI   L L  + + +G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + P I +YN  +  LC+          LN+ +   I+P  + +  +V A+
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 619 MNNG 622
              G
Sbjct: 289 CKEG 292



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 28/142 (19%), Positives = 57/142 (40%)

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D AL    + L     P +  +  L+  +         L L   M      PN+ T N 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L++          A  +   IL+   +P+I ++N  ++GLC   ++ +     +  +  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 604 ILPTTITWHILVRAVMNNGAST 625
             P  +T+  L+  +   G+++
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTS 190


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 284/570 (49%), Gaps = 28/570 (4%)

Query: 79  VIQAYGKNSMPDKALDVFQRM--NEIFG----CEAGI--LCRKRQFEKAKRFLNSLWEKG 130
           V++A  K  M D A+ +F  M  +EI      C   I  LC+ R   +A   L  + + G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             P  +++ +V++ LVK G +  AL + DE+   G + +VV    L+ G+  + +  +A 
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           +I+E   +   + P  VTY V+I G  + G  ++  E+  +M+ +     +  +   I G
Sbjct: 303 DIFEE-TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN- 309
           L      + A  +++EM +SGI  DA TYN +I   C+  KI+E   LWE M   G    
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V+Y+ L+     NG +DEA+ ++  +  K    +  T+  L+ G       +KA  +L 
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 370 EVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E+++ G                  GR+ +   ++ R +  G    A T NS++NGFI+A 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            + +A  ++++M  KG  P +V+Y + I+G CK      A   + ++  KG +PD+  Y+
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYN 600

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI G CQ   +  AL++    L+ G  P++++YN  I G  +   +E+AL+LY  M K 
Sbjct: 601 SLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKE 660

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               +  TY TL+DG  K G+   AL++++ ++ +   PD I++     GLC    + DA
Sbjct: 661 GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDA 720

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + L++     I P  + +++L+   + NG
Sbjct: 721 RKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 242/547 (44%), Gaps = 55/547 (10%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG   D + +  V+    K G    A+ +FDEM    +E +    ++ I    K  D  R
Sbjct: 171 KGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANR 230

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +  ++  +    P   T+N +++ L K GR +E L + D +    ++       + +
Sbjct: 231 ALLVLRKM-QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HG C    V  A  ++ E +  G+    VTY  +I G    G  ++ +EL   M   G L
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 309 NVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
              + +N++I+GLL +    +A+S+++ + +     D+ T+ +LI+ LC+   + +A+ +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
             ++ E G                  G + +A  L   M   G   N  T  +LM G I 
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER---------------------- 448
            +  + A  L  EM + G S    +YNTLINGLC V R                      
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 449 -------------FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                         G A++  ++M  KG  P+++TY+  I+G C++   D+ALK+     
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG  PD+  YN LI G C  G +  ALQ+   M K   +PN+  YN+ + G       +
Sbjct: 589 CKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +AL ++  +++E +  D  +Y   + G      ++ A +  ++ + +G +P  IT+  L 
Sbjct: 649 EALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALT 708

Query: 616 RAVMNNG 622
             +  NG
Sbjct: 709 HGLCRNG 715



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 246/513 (47%), Gaps = 18/513 (3%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S+  +G+ PD  S   ++    +S     ALA+  EM  +G   +   +++++   FK+G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            Y  A  +++ +   + + P+    +V I  LCK    +  L +  +M+        FT+
Sbjct: 192 MYDDAVRLFDEMP-ASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S +  L K G +E A  +  E++ +G  +  V    ++ G+C   ++++  +++E   R
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 305 KGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G +   V+Y +LIRG  E G  ++A  +   +R+      +    ++I GL  +     
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 364 AIQILNEVEEGG----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           A+ +  E+ + G                  ++ +A +L  +M++ G K    T +SL+  
Sbjct: 371 AVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +     ++ A+ L+ EM  KG +P VV+Y TL+ G      F +AY+ + EM + G   +
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ LINGLC   ++    ++  +F  +GF P    YN +I+G   AG +  A  +Y 
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  +   PN+VTY + +DG  KT  CD AL++ N +  + LRPDI +YN  + G C   
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEG 610

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            MS A + L   L  G+LP    ++  +    N
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 87/409 (21%)

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGK 325
           EM   G  +DA                      W             +++++R   + G 
Sbjct: 167 EMRGKGRPLDA----------------------W------------MFDVVMRACFKEGM 192

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
            D+A+ +++ +       D     V I  LCK    N+A+ +L ++++ G          
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +A  + + +   G K++     +LM+G+    ++  A+ +F+E  R G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 429 CSPTVVSYNTLING------------LCKVER-----------------------FGEAY 453
             PT V+Y  LI G            LC+  R                       + +A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           S  KEM + G  PD  TY++LI+ LCQ +KI  AL L  +  + G  P +  Y+ L+   
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G +++A++LY+ M  +   PN+VTY TLM G       DKA  +   + +  +  + 
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +YN  + GLC   R+ +  E L      G +PT +T++ ++   +  G
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 86/199 (43%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G +P   S   L+    +     +A + + EM  KG   D   + +++    +   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            D A++L  +       PD  + ++ I  LC       AL +   M+    VP   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++D L K G  ++AL I + +L    +  ++     + G C    +  A +   + L  G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 604 ILPTTITWHILVRAVMNNG 622
           ++PT +T+ +L+R     G
Sbjct: 313 LVPTDVTYTVLIRGCTEEG 331


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 247/497 (49%), Gaps = 31/497 (6%)

Query: 72  PEDVALS--VIQAYGKNSMPDKALDVFQRMNEI-----FGCEAGILCRKRQFEKAKRFLN 124
           P D AL+  +++   +   PD A  V            +G      CR  +   A+R + 
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVG 159

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +    ++P+ Y+Y  +I+ L + G +  AL+V D+M  RG   +VV YNIL++   K  
Sbjct: 160 GMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGR 216

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            Y +A E+ + L+      PN VTYNV+++G+C  G  D+ LE+   +  +  +  +  Y
Sbjct: 217 GYRQAMELID-LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNY 275

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + + GLC A     A+ +  EM+      +  T+N +I   CR G +++  +L E M +
Sbjct: 276 NTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 335

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            GC  N+V+YN +I GL E   VD A+ +   ++   C  D  T+  L+ GLC       
Sbjct: 336 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCS------ 389

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         +  DA  L++ M ++GC  +  T N+L+    Q   + +AI +FK+
Sbjct: 390 ------------AAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  KGC+P  ++Y+T+I+GL K  +  +A     EM  KG+ PD I Y LL   L     
Sbjct: 438 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDT 496

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           I+ A++   +    G +P   +YN ++ GLC  GK E A+ + + M    C+P+ +TY  
Sbjct: 497 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVI 556

Query: 544 LMDGLFKTGDCDKALEI 560
           L++GL   G  ++A E+
Sbjct: 557 LIEGLAYEGYLNEAREL 573



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 250/497 (50%), Gaps = 27/497 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ + + A+R + +    G    V +YG + +G  ++G L  A  V   M    V+ N
Sbjct: 113 LCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPN 166

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI    ++G    A  + + ++      P+VVTYN+++   CK   + + +E+ 
Sbjct: 167 AYTYNPLIHTLCERGQVRDALSVLDDMLCR-GCAPDVVTYNILLEATCKGRGYRQAMELI 225

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+      ++ TY   + G+C  G+V+ A  + R +   G     V YN ++ G C A
Sbjct: 226 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +  EL   M R+ C  N  ++N++I  L   G + +AI + E + +  C A+  T+
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +INGLC+   ++ A+                   L+++M  +GCK +  T N+L+ G 
Sbjct: 346 NAIINGLCEQRNVDGAM------------------GLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A++  +A  L   M++ GC P  V++NTLI  LC+     +A    K+M +KG  P+ 
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITYS +I+GL ++ K+D AL+L  +   KGF PD  +Y +L   L     +E+A+Q    
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRK 506

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++     P+ V YN ++ GL + G  + A++I  +++     PD ++Y I ++GL     
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 566

Query: 589 MSDAFEFLNDALCRGIL 605
           +++A E L     R +L
Sbjct: 567 LNEARELLIKLCSRDVL 583



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 223/462 (48%), Gaps = 30/462 (6%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G    VV Y  L DG+ + G    A+    R+V    V PN  TYN +I+ LC+ G+  +
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDAR----RVVGGMPVQPNAYTYNPLIHTLCERGQVRD 185

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L + D M       D  TY   +   CK      A  +   M   G   + VTYN ++D
Sbjct: 186 ALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMD 245

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN---GKVDEAISIWELLREKN 340
           G C  G + +  EL   +   GC  + V+YN +++GL      G  DE ++  E+LRE N
Sbjct: 246 GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVT--EMLRE-N 302

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C  +  T  V+I  LC+ G L +AIQ+L                   +M KHGC  N  T
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLE------------------KMSKHGCTANIVT 344

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+++NG  +   ++ A+ L  +M   GC P +V+YNTL+ GLC   ++ +A   +  M 
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G  PD +T++ LI  LCQ   +  A+++  Q   KG TP+   Y+ +I GL  A K++
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL+L++ M  +   P+ + Y  L + L      ++A++    + +  + P  + YN  L
Sbjct: 465 QALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 523

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC   +   A + +   +  G +P  +T+ IL+  +   G
Sbjct: 524 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEG 565



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 209/416 (50%), Gaps = 25/416 (6%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RLV  +   P+    N ++  LC+ GR D+   +               Y +   G C+A
Sbjct: 92  RLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGP---AATVVAYGALTDGYCRA 148

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G +  A RV   M    +  +A TYN +I   C  G++++   + + M  +GC  +VV+Y
Sbjct: 149 GRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTY 205

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           NIL+    +     +A+ + +L+R + C  ++ T+ VL++G+C                 
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC----------------- 248

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            GEG + DA  L+  +  HGCK +    N+++ G   A +  +A  L  EM R+ C P  
Sbjct: 249 -GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNE 307

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            ++N +I  LC+     +A   +++M + G   +++TY+ +INGLC+ + +D A+ L  +
Sbjct: 308 ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
               G  PD+  YN L+ GLCSA +  DA +L  NM +  C+P+ VT+NTL+  L + G 
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
              A+E++  + ++   P+ I+Y+  + GL   +++  A E  N+   +G  P  I
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI 483



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%), Gaps = 26/406 (6%)

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++ L   G  D  L +   ++ + R  D+      +  LC+ G  + AERV   +   G 
Sbjct: 78  LSALVHRGDLDAALRL---VESSPRPPDAALANRLVRDLCRRGRPDDAERV---VGACGP 131

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
               V Y A+ DG+CRAG++ +   +  V G     N  +YN LI  L E G+V +A+S+
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRV--VGGMPVQPNAYTYNPLIHTLCERGQVRDALSV 189

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            + +  + C  D  T+ +L+   CK     +A++                  L++ M   
Sbjct: 190 LDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME------------------LIDLMRAE 231

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  N  T N LM+G      +++A+ L + +   GC P+ V+YNT++ GLC  ER+G+A
Sbjct: 232 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 291

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V EML +   P+  T++++I  LC+   +  A++L  +  + G T ++  YN +I+G
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC    V+ A+ L S MK   C P++VTYNTL+ GL        A E+ +++ +    PD
Sbjct: 352 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++N  +  LC    M DA E       +G  P +IT+  ++  +
Sbjct: 412 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 203/429 (47%), Gaps = 21/429 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + Q   A   L+ +  +G  PDV +Y  ++    K      A+ + D M   G   N
Sbjct: 177 LCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPN 236

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+L+DG   +GD   A E+   L       P+ V YN ++ GLC   R+ +  E+ 
Sbjct: 237 NVTYNVLMDGMCGEGDVDDALELLRNLPSH-GCKPSTVNYNTVLKGLCSAERWGDADELV 295

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     +  T+   I+ LC+ G ++ A ++  +M + G   + VTYNA+I+G C  
Sbjct: 296 TEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQ 355

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +     L   M   GC  ++V+YN L++GL    +  +A  + + + +  C  D+ T 
Sbjct: 356 RNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTF 415

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI  LC+ G +  AI++  +                  M   GC  N+ T +++++G 
Sbjct: 416 NTLIGFLCQKGLMVDAIEVFKQ------------------MPDKGCTPNSITYSTIISGL 457

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A+KL+ A+ LF EM  KG +P  + Y  L   L   +   EA   V+++ + G  P  
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 516

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y+ ++ GLC++ K + A+ +    +  G  PD   Y ILI GL   G + +A +L   
Sbjct: 517 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 576

Query: 529 MKKRNCVPN 537
           +  R+ + N
Sbjct: 577 LCSRDVLVN 585



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 46/323 (14%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D AL++ + +    GC+            LC   ++  A   +  +  +   P+  ++  
Sbjct: 254 DDALELLRNLPS-HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           VI  L + G L  A+ + ++M + G   N+V YN +I+G  ++ +   A  +  ++    
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSY 371

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              P++VTYN ++ GLC   ++ +  E+ D M +N    D+ T+ + I  LC+ G +  A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG------------CL 308
             V+++M + G   +++TY+ +I G  +A K+ +  EL+  MG KG            CL
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECL 491

Query: 309 N-----------------------VVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           N                        V YN ++ GL  NGK + AI I   +    C  D 
Sbjct: 492 NDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDD 551

Query: 346 TTHGVLINGLCKNGYLNKAIQIL 368
            T+ +LI GL   GYLN+A ++L
Sbjct: 552 LTYVILIEGLAYEGYLNEARELL 574


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 293/606 (48%), Gaps = 58/606 (9%)

Query: 38  PHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI----QAYGKNSM----P 89
           P LFH    R       + VS I+E ++      P +  L VI    ++Y   S+    P
Sbjct: 19  PTLFHSYHSRTNPIATSIEVSTIIETLD------PMEDGLKVISSRIRSYTITSVLQEQP 72

Query: 90  DKALDV----------FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           D  L              R   +     G L ++  FE   + L  L    +K    ++ 
Sbjct: 73  DTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFS 132

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I    ++G    A+  F  M +   + ++  +N+++    +K  ++ A  ++ ++ ++
Sbjct: 133 VLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM-LK 191

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
            ++ P+VVTY ++I+GLCK  +  + L ++D M       +   Y   + GLC+A  +  
Sbjct: 192 CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFD 251

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
           A+R++ +M  SG   D +TYN +++GFC++G + + F L +++ + G  L V+ Y  LI 
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--- 375
           GL    + +EA   ++ +  +N   D   + ++I GL + G + +A+ +L E+ E G   
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          G L +A SL   + KH C  N +T + L+ G  +   +  A  +F
Sbjct: 372 DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF 431

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP--------------D 467
           KEM + GC P+VV++N+LINGLCK  R  EA     +M E   KP              D
Sbjct: 432 KEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-EIVRKPSLFLRLSQGTDKVFD 490

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           + +  +++  LC+S  I  A KL  Q +  G  PD+  YNILI+G C  G +  A +L+ 
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+ +  +P+ VTY TL+DGL++ G  + ALEI+  ++++   P+  +Y   +   C  +
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 588 RMSDAF 593
            +S A 
Sbjct: 611 NISLAL 616



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 218/464 (46%), Gaps = 67/464 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            ++V+I    + G  ++ +E +  M+  + + D F +   +H L +      A  VY +M
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           ++  +  D VTY  +I G C+  K ++   L++ M  +G L N + Y+I++ GL +  K+
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A  ++  +R   CN D  T+ VL+NG CK+GYL+ A  +L  + + G           
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG----------- 298

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                H   +  Y C  L+NG  +A + E A   +++M R+   P V+ Y  +I GL + 
Sbjct: 299 -----HILGVIGYGC--LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQE 351

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA + + EM E+G +PD I Y+ LI G C    +D A  L  +  +    P+   Y
Sbjct: 352 GRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK---------------- 550
           +ILI G+C  G +  A  ++  M+K  C+P++VT+N+L++GL K                
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEI 471

Query: 551 ----------TGDCDKALEIWN-HILEERL---------------------RPDIISYNI 578
                     +   DK  +I +  ++ ERL                      PDI +YNI
Sbjct: 472 VRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNI 531

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G C    ++ AF+   +   +G +P ++T+  L+  +   G
Sbjct: 532 LINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 249/569 (43%), Gaps = 82/569 (14%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL LFD  T + G   +  ++  +L  L   K +    R+   +    C         ++
Sbjct: 217 ALVLFDEMT-DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 81  QAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
             + K+   D A  + Q + +         +GC    L R R++E+A  +   +  + +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PDV  Y  +I GL + G +  AL +  EM ERG+  + +CYN LI GF   G Y+   E 
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG-YLDEAES 394

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
               + +   +PN  TY+++I G+CK G  ++   ++  M+K        T+ S I+GLC
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 253 KAGNVEGAERVYREM--------------------------------------------- 267
           KA  +E A  ++ +M                                             
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 268 ---VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
              V+SG+  D  TYN +I+GFC+ G I   F+L++ M  KG + + V+Y  LI GL   
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ ++A+ I+E + +K C  +S+T+  ++   C+   ++ A+ +  +      G   +  
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKV 634

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +V                S  N      +L+ AI    EM  K  +  +  Y   + GL
Sbjct: 635 RVV--------------AESFDN-----EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGL 675

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYS--LLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            + +R  EA++    +  K +K ++ + S  +LI  LC  + +DMA+ +    L++GF  
Sbjct: 676 VQAKRDCEAFAIFSVL--KDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRL 733

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMK 530
              + N L+  L    + +DAL L + M+
Sbjct: 734 MPPICNQLLCNLLHLDRKDDALFLANRME 762



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 145/270 (53%), Gaps = 12/270 (4%)

Query: 362 NKAIQILNEV---------EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           N AI+I +E          E G + +  ++  L+   D   CK + +  N +++  ++  
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD---CKPDLFAFNLILHFLVRKE 177

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
               A+ ++ +M +   +P VV+Y  LI+GLCK  +  +A     EM ++G  P+ I YS
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++++GLCQ+KKI  A +L  +    G   D+  YN+L++G C +G ++DA  L   + K 
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             +  ++ Y  L++GLF+    ++A   +  +L E ++PD++ Y I ++GL    R+++A
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              L +   RG+ P TI ++ L++   + G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMG 387



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 292 IKE-CFEL-WEVMG--RKGCLNVVS--YNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           IKE  FEL W+V+   +   + + S  +++LI    E G  ++A+  + L+R+ +C  D 
Sbjct: 104 IKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDL 163

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN--AYTCNS 403
               ++++ L +      A+ + N++ +                    C LN    T   
Sbjct: 164 FAFNLILHFLVRKEAFLLALAVYNQMLK--------------------CNLNPDVVTYGI 203

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +  K ++A+ LF EM+ +G  P  + Y+ +++GLC+ ++  +A     +M   G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D+ITY++L+NG C+S  +D A  L     + G    V  Y  LI+GL  A + E+A 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             Y  M + N  P+++ Y  ++ GL + G   +AL +   + E  LRPD I YN  +KG 
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C    + +A     +       P   T+ IL+  +  NG
Sbjct: 384 CDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNG 422



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 67/367 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM-------- 161
           +C+     KA+     + + G  P V ++ ++INGL K+  L  A  +F +M        
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477

Query: 162 ---FERGVET--NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
                +G +   ++    ++++   + G  ++A ++  +LV ++ V P++ TYN++ING 
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV-DSGVLPDIRTYNILINGF 536

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G  +   +++  M+      DS TY + I GL +AG  E A  ++ +MV+ G   ++
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596

Query: 277 VTYNAMIDGFCRAGKIKECFELW-----------------------------------EV 301
            TY  ++   CR   I     +W                                   E+
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEM 656

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +    ++  Y I + GL++  +  EA +I+ +L++   N  S +  +LI  LC    L
Sbjct: 657 DIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENL 716

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           + A+ +     E                   G +L    CN L+   +   + ++A+FL 
Sbjct: 717 DMAMDVFLFTLE------------------RGFRLMPPICNQLLCNLLHLDRKDDALFLA 758

Query: 422 KEMSRKG 428
             M   G
Sbjct: 759 NRMEASG 765



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 71/146 (48%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           L+I  L +    ++  K+  +            +++LI     AG  E A++ +  M+  
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDF 157

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           +C P+L  +N ++  L +      AL ++N +L+  L PD+++Y I + GLC   +  DA
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 593 FEFLNDALCRGILPTTITWHILVRAV 618
               ++   RGILP  I + I++  +
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGL 243


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 261/562 (46%), Gaps = 63/562 (11%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F       C+  + E+A +  + + E G+ P+V ++ TVI+GL   G    A    ++M
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310

Query: 162 FERGVETNVVCYNILIDGFFKK---GD-YMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            ERG+E  ++ Y+IL+ G  +    GD Y   KE+ ++        PNV+ YN +I+   
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-----GFPPNVIVYNNLIDSFI 365

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           + G  ++ +E+ D M        S TY + I G CK G  + AER+ +EM+  G  V+  
Sbjct: 366 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 425

Query: 278 TYNA-----------------------------------MIDGFCRAGKIKECFELWEVM 302
           ++ +                                   +I G C+ GK  +  ELW   
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG  ++  + N L+ GL E GK+DEA  I + +  + C  D  ++  LI+G C    L
Sbjct: 486 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 545

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A   L+E                  M K G K + YT + L+ G    +K+E AI  +
Sbjct: 546 DEAFMFLDE------------------MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 587

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +  R G  P V +Y+ +I+G CK ER  E   F  EM+ K  +P+ + Y+ LI   C+S
Sbjct: 588 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 647

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++ MAL+L      KG +P+   Y  LI G+    +VE+A  L+  M+     PN+  Y
Sbjct: 648 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 707

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+DG  K G   K   +   +  + + P+ I+Y + + G      +++A   LN+   
Sbjct: 708 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 767

Query: 602 RGILPTTITWHILVRAVMNNGA 623
           +GI+P +IT+   +   +  G 
Sbjct: 768 KGIVPDSITYKEFIYGYLKQGG 789



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 253/508 (49%), Gaps = 20/508 (3%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  KG+ P   +   ++  LV++ +       FD +  +GV  +V  +   I+ F K G 
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 264

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A +++ ++  E  V PNVVT+N +I+GL  CGR+DE     ++M +   E    TY 
Sbjct: 265 VEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 323

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GL +A  +  A  V +EM + G   + + YN +ID F  AG + +  E+ ++M  K
Sbjct: 324 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 383

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G  L   +YN LI+G  +NG+ D A  + + +     N +  +   +I  LC +   + A
Sbjct: 384 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 443

Query: 365 IQILNEV----EEGGEGRLADAASLVNRMDKH-------------GCKLNAYTCNSLMNG 407
           ++ + E+       G G L    S + +  KH             G  ++  T N+L++G
Sbjct: 444 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 503

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A KL+ A  + KE+  +GC    VSYNTLI+G C  ++  EA+ F+ EM+++G KPD
Sbjct: 504 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 563

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TYS+LI GL    K++ A++      + G  PDV  Y+++I G C A + E+  + + 
Sbjct: 564 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 623

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  +N  PN V YN L+    ++G    ALE+   +  + + P+  +Y   +KG+   S
Sbjct: 624 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 683

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A     +    G+ P    +  L+
Sbjct: 684 RVEEAKLLFEEMRMEGLEPNVFHYTALI 711



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 7/165 (4%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ---KGFTPDVTMYNILIHGLCSAGK 518
           KG  P   T ++L+  L ++ +     + CC+      KG +PDV ++   I+  C  GK
Sbjct: 209 KGMFPSKTTCNILLTSLVRANE----FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGK 264

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE+A++L+S M++    PN+VT+NT++DGL   G  D+A      ++E  + P +I+Y+I
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +KGL    R+ DA+  L +   +G  P  I ++ L+ + +  G+
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 293/624 (46%), Gaps = 64/624 (10%)

Query: 57  VSRILELIEIQK------CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI- 109
           V R+ E I I K      CY        ++ A  ++    +A+++F  M E  GCE  I 
Sbjct: 52  VGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRE-RGCEPNIH 110

Query: 110 --------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
                   +C++ + E+ +R L+ + EKGL P V +Y  +I+G  K G +  A  + D M
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
                  N   YN LI GF +K +  RA  +  ++ +E+ + P+VVTYN +I+G CK G 
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM-LESRLTPSVVTYNSLIHGQCKIGY 229

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            D    + + M +N    D +TY  FI  LCK G +E A  ++  + E GI  + V Y A
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +IDG+C+AGK+ +   L + M  + CL N  +YN LI GL +  KV EA+ + E + +K 
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAA 383
                 T+ +LI  + K G  + A +IL+++   G                  G + +A 
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            +++ M + G   +A T   +++ +     L  A  + K M   GC P+  +Y+ LI  L
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469

Query: 444 CKVE-----------------------------RFGEAYSFVKEMLEKGWKPDMITYSLL 474
            K E                             +F  A    ++MLE G  P++ TY+ L
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I GLC+  ++ +A KL     ++G +P   +YN L++  C  G   DA++L   M +   
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGH 589

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           +P L + N L  GL++ G  +KA  +++++L+     D +++ I + GL          E
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSE 649

Query: 595 FLNDALCRGILPTTITWHILVRAV 618
            L     RG      T+ +L+  +
Sbjct: 650 LLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 236/470 (50%), Gaps = 28/470 (5%)

Query: 141 VINGLVKSGDLL---------GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           ++NG  K G+L+          A +VF+ M ++G   N V Y  LI G  + G       
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I++++  E   YP V TY V+++ L + GR  E + ++  M++   E +  TY   I+ +
Sbjct: 61  IFKKM-REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           CK   +E   R+  EMVE G+     TYNA+IDG+C+ G ++   E+ ++M    C  N 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            +YN LI G      V  A+++   + E        T+  LI+G CK GYL+ A ++LN 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           + E G                 +GR+ +A  L N + + G K N     +L++G+ +A K
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A  L   M  + C P   +YN LI+GLCK  +  EA   ++ M++KG K  + TY++
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI  + +    D A ++  Q +  G+ PDV +Y   IH  C+ G +++A  + S M +R 
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            +P+ +TY  ++D     G  + A ++   + +    P   +Y+  +K L
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 202/433 (46%), Gaps = 62/433 (14%)

Query: 247 FIHGLCKAGN---------VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
            ++G CK GN         V  A  V+  M + G   + V+Y  +I G C  G++ E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 298 LWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           +++ M    C   V +Y +++  L E+G+  EAI+++  +RE+ C  +  T+ V+IN +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 357 KNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAY 399
           K   L +  +IL+E+ E G                 EG +  A  +++ M  + C  N  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N L+ GF +   +  A+ L  +M     +P+VV+YN+LI+G CK+     AY  +  M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            E G  PD  TYS+ I+ LC+  +I+ A  L     +KG   +  +Y  LI G C AGK+
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGL------------------------------- 548
           +DA  L   M   +C+PN  TYN L+DGL                               
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 549 ----FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
                K GD D A  I + ++    +PD+  Y   +   C+   + +A + ++    RG+
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV 420

Query: 605 LPTTITWHILVRA 617
           +P  +T+ +++ A
Sbjct: 421 MPDALTYTLVIDA 433



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 255/572 (44%), Gaps = 36/572 (6%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPK---------------LVVHVSR 59
           E N HT   + ++  +E        +   ++ + + P                +V     
Sbjct: 106 EPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQE 165

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------C 111
           IL+L+    C   E     +I  + +     +A+ +  +M E     + +         C
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +    + A R LN + E G+ PD ++Y   I+ L K G +  A  +F+ + E+G++ N V
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LIDG+ K G    A  + +R++ E  + PN  TYN +I+GLCK  +  E L + + 
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCL-PNSSTYNALIDGLCKERKVQEALLLMES 344

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +   +    TY   I  + K G+ + A R+  +MV SG   D   Y A I  FC  G 
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           IKE  ++  +M  +G + + ++Y ++I      G ++ A  + + + +  C+    T+  
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464

Query: 351 LINGLCKNGYLNK--AIQILNEVEEGGEGRLAD---------AASLVNRMDKHGCKLNAY 399
           LI  L K     K   + + + +       +AD         A  L  +M +HGC  N  
Sbjct: 465 LIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNIN 524

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T   L+ G  +  +L  A  LF  M+ +G SP+   YN+L+N  C++  +G+A   V  M
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           +E G  P + + ++L  GL +    + A  +    LQ G+  D   + ILI GL   G  
Sbjct: 585 MEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLS 644

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
           +   +L   M+ R C  +  TY  L++GL  T
Sbjct: 645 DGCSELLGVMEARGCQIHPQTYRMLIEGLDGT 676



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 9/272 (3%)

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           ++NG CK G         N VE      +  A S+ N M K GC+ N  +  +L++G  +
Sbjct: 1   MVNGYCKLG---------NLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCE 51

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             +++  I +FK+M    C PTV +Y  +++ L +  R  EA +   EM E+G +P++ T
Sbjct: 52  VGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHT 111

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+++IN +C+  K++   ++  + ++KG  P V  YN LI G C  G VE A ++   M 
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH 171

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
             +C PN  TYN L+ G  +  +  +A+ + + +LE RL P +++YN  + G C    + 
Sbjct: 172 SNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLD 231

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            A+  LN     G++P   T+ + +  +   G
Sbjct: 232 SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 244/479 (50%), Gaps = 23/479 (4%)

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
           L+++G+L       + M  +G   +V+    LI  F K G    A +I   ++ E+    
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMG-ILEESGAVI 147

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V +YNV+I+G CK G  +E L + DRM  +    ++ TY + +  LC  G ++ A +V 
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRMGVSP---NAATYDAVLCSLCDRGKLKQAMQVL 204

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
              ++S  + D VT   +ID  C+   + +  +L+  M  KGC  +VV+YN+LI+G  + 
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G++DEAI   + L    C  D  +H +++  LC  G                  R  DA 
Sbjct: 265 GRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGG------------------RWMDAM 306

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L+  M + GC  +  T N L+N   Q   L  A+ + + M + G +P   S+N LI G 
Sbjct: 307 KLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGF 366

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C  +    A  +++ M+ +G  PD++TY++L+  LC+  K+D A+ +  Q   KG +P +
Sbjct: 367 CNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 426

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN +I GL   GK E A++L   M  +   P+L+T  +++ GL + G   +A++ +++
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +    +RP+   YN  + GLC   + S A +FL D + +G  PT  T+  L++ +   G
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEG 545



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 245/505 (48%), Gaps = 23/505 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  RFL  +  KG  PDV +   +I    K G    A  +   + E G   +
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN+LI G+ K G+   A  + +R+     V PN  TY+ ++  LC  G+  + +++ 
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVL 204

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            R  +++   D  T    I   CK   V  A +++ EM   G   D VTYN +I GFC+ 
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E     + +   GC  +V+S+N+++R L   G+  +A+ +   +  K C     T 
Sbjct: 265 GRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L KA+ +L                    M KHG   N+ + N L+ GF
Sbjct: 325 NILINFLCQKGLLGKALNVL------------------EMMPKHGHTPNSRSFNPLIQGF 366

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                ++ AI   + M  +GC P +V+YN L+  LCK  +  +A   + ++  KG  P +
Sbjct: 367 CNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 426

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL +  K ++A++L  +   KG  PD+     ++ GL   GKV +A++ +  
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +K+    PN   YN+++ GL K+     A++    ++ +  +P   +Y   +KG+     
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGL 546

Query: 589 MSDAFEFLNDALCRGILPTTITWHI 613
             DA +  N+   RG++  ++   +
Sbjct: 547 AEDASKLSNELYSRGLVKRSLVEKV 571



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 49/357 (13%)

Query: 317 IRGLLENGKVDE-----------------------------------AISIWELLREKNC 341
           +R L+ NG+++E                                   A  I  +L E   
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--------------GEGRLADAASLVN 387
             D T++ VLI+G CK+G + +A+++L+ +                   G+L  A  ++ 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           R  +  C  +  TC  L++   + S +  A+ LF EM  KGC P VV+YN LI G CK  
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA  F+K++   G +PD+I++++++  LC   +   A+KL    L+KG  P V  +N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI+ LC  G +  AL +   M K    PN  ++N L+ G       D+A+E    ++  
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              PDI++YNI L  LC   ++ DA   L+    +G  P+ I+++ ++  ++  G +
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 13/286 (4%)

Query: 32  PGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSM 88
           P Y   P +  H  ILR L      +   ++L  +  + C  P  V  ++ I    +  +
Sbjct: 278 PSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL-PSVVTFNILINFLCQKGL 336

Query: 89  PDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
             KAL+V + M        +  F       C  +  ++A  +L  +  +G  PD+ +Y  
Sbjct: 337 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNI 396

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++  L K G +  A+ +  ++  +G   +++ YN +IDG  K G    A E+ E +  + 
Sbjct: 397 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK- 455

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+++T   ++ GL + G+  E ++ +  +K+     ++F Y S I GLCK+     A
Sbjct: 456 GLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLA 515

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
                +MV  G      TY  +I G    G  ++  +L   +  +G
Sbjct: 516 IDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 250/510 (49%), Gaps = 26/510 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CRK      +  L+ + +   +P+ ++Y  VIN     G    ALA F+ M ERG    
Sbjct: 66  FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 125

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +N +I+ F K+G+ + A+++++ L  E    PN + YN ++NG  K    D+   ++
Sbjct: 126 VVTFNTVINAFCKEGNVVEARKLFDGL-KEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+K     D  T+   + G  K G  E  +R+ +++   G+  D   ++  + G C A
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  E    M  KG   +++++N +I    + G  D+A   ++L+         +T 
Sbjct: 245 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 304

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ GL  NG                  RL +A  L+ +M + G  +N      L++ F
Sbjct: 305 SSLLMGLSING------------------RLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A  L+ EM R+G  P VV+++  I+GL K     EAY+   EML KG  P+ 
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C+  K++ ALKL      +G  PD+   N++I GLC  G++  A+ ++ +
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    P+++TYNTL++G  K  D   A  + N +      PD+ +YNI + G CS  R
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526

Query: 589 MSDAFEFLNDALCRGIL------PTTITWH 612
           M+ A   L++ +  GIL      P T+  H
Sbjct: 527 MNRAVLMLDELVSAGILSFSFACPPTLNAH 556



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 247/518 (47%), Gaps = 19/518 (3%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   L  + E G++P       +   L++ GD      +F ++  RG +     ++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            GF +KG  +   E    L+ +    PN   YN++IN  C  GR  + L  ++ M +   
Sbjct: 64  LGFCRKG-CIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                T+ + I+  CK GNV  A +++  + E G   +A+ YN +++G+ +  +I +   
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 298 LWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+E M +KG   + +++NIL+ G  + G+ ++   + + +       D +   + ++GLC
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 357 KNGYLNKAIQILNEVEEGG----------------EGRLADAASLVNRMDKH-GCKLNAY 399
             G L++A++ L ++ E G                +  L D A    ++  H G   +  
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           TC+SL+ G     +L+ A  L  +M  KG S   +++  L++   K      A S   EM
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             +G  PD++ +S  I+GL +   ++ A  +  + L+KG  P+   YN LI G C  GK+
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
            +AL+L   M+ R  +P++ T N ++ GL K G    A+ ++  + +  L PDII+YN  
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           + G C    M +A   +N     G  P   T++I +  
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHG 520



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 221/472 (46%), Gaps = 24/472 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNV 211
           AL +   M E GV  +     IL     + GDY     +W+    V+     P   T++ 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDY---GNVWKLFKDVIRRGPQPCKYTFSG 61

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I G C+ G       +   M K   E ++F Y   I+  C  G    A   +  M+E G
Sbjct: 62  IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 121

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
                VT+N +I+ FC+ G + E  +L++ +   G   N + YN L+ G ++  ++D+A 
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            ++E +R+K    D  T  +L++G  K G            EE G+  L D + L    D
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGR-----------EEDGDRLLKDISVLGLLPD 230

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +    ++       ++G   A +L+ A+    +M  KG SP+++++N++I    +     
Sbjct: 231 RSLFDIS-------VSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 283

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+   K M+  G  P   T S L+ GL  + ++  A +L  Q ++KG + +   + +L+
Sbjct: 284 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 343

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
                 G V  A  L+  M++R   P++V ++  +DGL K G  ++A  ++  +L + L 
Sbjct: 344 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P+  +YN  + G C C ++++A +       RG+LP   T ++++  +   G
Sbjct: 404 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 455



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 192/419 (45%), Gaps = 48/419 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   ++N    E N   A  LFD   +E G++ +  +++ ++   +  + +   + + 
Sbjct: 126 VVTFNTVINAFCKEGNVVEARKLFD-GLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184

Query: 62  ELIEIQKCYCPEDVALSVIQA----YGKNSMPDKALDVFQRMN-----EIFGCEAGILCR 112
           E +  +K   P+ +  +++ +    YG+    D+ L     +       +F      LC 
Sbjct: 185 EEMR-KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN----------------------------- 143
             + ++A  FL  + EKGL P + ++ +VI                              
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 144 ------GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
                 GL  +G L  A  +  +M E+G+  N + + +L+D FFK+GD + A+ +W  + 
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM- 362

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               ++P+VV ++  I+GL K G  +E   ++  M +     ++F Y S I G CK G +
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A ++ + M   G+  D  T N +I G C+ G+++    ++  M + G   ++++YN L
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           I G  +   +  A ++   +     N D TT+ + I+G C +  +N+A+ +L+E+   G
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 28/334 (8%)

Query: 296 FELWEVMGRKGCLNV----VSYNILIRGLLENGKVDEAISIWELLRE---KNCNADSTTH 348
           F+  E++GR   + V        IL + LL   +V +  ++W+L ++   +       T 
Sbjct: 3   FQALEILGRMREVGVRPSASGVAILFKLLL---RVGDYGNVWKLFKDVIRRGPQPCKYTF 59

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I G C+ G ++     L E             SL++ M K  C+ NA+  N ++N  
Sbjct: 60  SGIILGFCRKGCIH-----LGE-------------SLLHLMPKFHCEPNAFAYNIVINAC 101

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +  +A+  F  M  +GC+PTVV++NT+IN  CK     EA      + E G+ P+ 
Sbjct: 102 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 161

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I Y+ L+NG  + ++ID A  L  +  +KG  PD   +NIL+ G    G+ ED  +L  +
Sbjct: 162 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 221

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +     +P+   ++  + GL   G  D+A+E    +LE+ L P II++N  +        
Sbjct: 222 ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGL 281

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              AFE     +  G+ P+  T   L+  +  NG
Sbjct: 282 EDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSING 315


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 301/665 (45%), Gaps = 85/665 (12%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V++                 +A  
Sbjct: 125 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVNII----------------IANH 164

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 165 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    P+V +Y TVI+G  K GD+  A  +F EM +RG+  ++V YN ++    K    M
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAM 283

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V PN  TYN +I G    G++ E + ++  M+++    D  T    
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  LCK G ++ A  V+  M   G   D  +YN M++G+   G + +  +L+++M   G 
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 308 L------------------------------------NVVSYNILIRGLLENGKVDEAIS 331
                                                +VV+Y  +I  L   GK+D+A+ 
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--------------- 376
            +  + ++    D   +  LI G C +G L KA ++++E+   G                
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 523

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR+ DA ++ +     G   +A   + LM+G+    K+E A+ +F  M   G  P VV
Sbjct: 524 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 583

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
            Y TL+NG CK+ R  E  S  +EML++G KP  I YS++I+GL Q+ +   A     + 
Sbjct: 584 VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEM 643

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G   D+  YNI++ GL      ++A+ L+  ++  N   N++T NT++DG+F+T   
Sbjct: 644 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 703

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++A +++  I   RL P++++Y+I +  L     + +A +  +     G  P +   + +
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 763

Query: 615 VRAVM 619
           VR ++
Sbjct: 764 VRELL 768



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 256/520 (49%), Gaps = 27/520 (5%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA     KR  E     L+   E G  PDV+SY  ++  L   G    A  +   M E 
Sbjct: 170 CEA-----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224

Query: 165 GV--ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G     NVV YN +IDGFFK+GD  +A ++++ +V +  + P++VTYN +++ LCK    
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV-QRGIPPDLVTYNSVVHALCKARAM 283

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+      +M       +++TY + I+G    G  + A RV++EM    I  D VT + +
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +   C+ GKIKE  ++++ M  KG   +V SYNI++ G    G + +   +++L+     
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T  VLI      G L+KA+ I NE                  M  HG K +  T 
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNE------------------MRDHGVKPDVVTY 445

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +++    +  K+++A+  F +M  +G +P   +YN LI G C      +A   + E++ 
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G   D++ +S +IN LC+  ++  A  +    +  G  PD  +Y++L+ G C  GK+E 
Sbjct: 506 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 565

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+++  M      PN+V Y TL++G  K G  D+ L ++  +L+  ++P  I Y+I + 
Sbjct: 566 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 625

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           GL    R   A    ++    GI     T++I++R +  N
Sbjct: 626 GLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKN 665



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 246/517 (47%), Gaps = 21/517 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ ++     ++ G  ++     AL +      E G   +V
Sbjct: 136 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 195

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSV-YPNVVTYNVMINGLCKCGRFDECLEMW 229
             Y+IL+     +G   +A ++   +    +V  PNVV YN +I+G  K G  ++  +++
Sbjct: 196 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 255

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  TY S +H LCKA  ++ AE   R+MV   +  +  TYN +I G+   
Sbjct: 256 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 315

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ KE   +++ M R   L +VV+ ++L+  L + GK+ EA  +++ +  K  N D  ++
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++NG     Y  K             G L D   L + M   G   + YT N L+  +
Sbjct: 376 NIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD 
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C    +  A +L  + +  G   D+  ++ +I+ LC  G+V DA  ++  
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 537

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
                  P+ V Y+ LMDG    G  +KAL +++ ++   + P+++ Y   + G C   R
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + +      + L RGI P+TI + I++  +   G + 
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 196/411 (47%), Gaps = 20/411 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA    N + + G+KPDV +Y TVI  L + G +  A+  F++M ++GV  +   YN 
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI GF   G  ++AKE+    +M   ++ ++V ++ +IN LCK GR  +   ++D     
Sbjct: 483 LIQGFCTHGSLLKAKELISE-IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D+  Y   + G C  G +E A RV+  MV +GI  + V Y  +++G+C+ G+I E 
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L+  M ++G   + + Y+I+I GL + G+   A   +  + E     D  T+ +++ G
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L KN   ++AI +  E+                       K+N  T N++++G  Q  ++
Sbjct: 662 LFKNRCFDEAIFLFKELR------------------AMNVKINIITLNTMIDGMFQTRRV 703

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  LF  +SR    P VV+Y+ +I  L K     EA      M   G +P+    + +
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 763

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           +  L +  +I  A     +  ++ F+ +     +L+    S G   + ++ 
Sbjct: 764 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 814



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S TY   +    +A   E A   + +++ +G+ V+ +  N +++GFC A +  E  + L 
Sbjct: 124 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILL 183

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SY+IL++ L + GK  +A  +  ++ E    C+ +   +  +I+G  
Sbjct: 184 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFF 243

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T NS+++   +A  ++ 
Sbjct: 244 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYNSVVHALCKARAMDK 285

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  K   P   +YN LI G     ++ EA    KEM      PD++T S+L+ 
Sbjct: 286 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 345

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  YNI+++G  + G + D   L+  M      P
Sbjct: 346 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  T+N L+      G  DKA+ I+N + +  ++PD+++Y   +  LC   +M DA E  
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G+ P    ++ L++    +G+
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGS 492


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 296/632 (46%), Gaps = 58/632 (9%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           ISA   LNL     +P TALA F+   ++ G+ H+      +L  L+ P   + ++  + 
Sbjct: 80  ISALFALNL-----DPQTALAFFNWIGQKHGFKHNVQSHVSMLNILV-PNGYLRIAENMR 133

Query: 63  LIEIQKCYCPEDV--ALSVIQAYGKNS-----------------------MPDKALDVFQ 97
           ++ I+     E+    L ++++  +                         M D+   V+ 
Sbjct: 134 ILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYL 193

Query: 98  RMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
            M +      IF     +   C+     +A+ +++ + + GL  D ++Y ++I G  ++ 
Sbjct: 194 EMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNK 253

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
           ++  A A+F  M  +G   N V Y  LI GF +      A +++ ++  E + +P V TY
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM-HEDNCWPTVRTY 312

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
            V+I  LC+ GR  E L M+  M +   + +  TY   I  LC+  N + A+++   M+E
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            G+    VTYNA+IDG+C+ G      E+  +M    C  N  +YN LI G      + +
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHK 432

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A+S+   + E+    +  T+ +LI+G CK G L  A ++L+ + E G             
Sbjct: 433 AMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID 492

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                G + +A SL   + + G K N    ++L++G+ +  K+ +  FL  +M   GC P
Sbjct: 493 TLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP 552

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             ++YN+LI+G CK + F EA   V  M+++  +P   TY++LI+ L +  + D A  + 
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            Q L  G  PDV +Y   IH  CS G+++DA  L   M  +  +P+ + Y   +D   + 
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRF 672

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           G  D A  I   + E    P   +Y+  +K L
Sbjct: 673 GSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 162/579 (27%), Positives = 262/579 (45%), Gaps = 79/579 (13%)

Query: 117 EKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDL--------------------LGAL 155
           + A  F N + +K G K +V S+ +++N LV +G L                    L  L
Sbjct: 91  QTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVL 150

Query: 156 AVFDEMFER----GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
            +   M  R      +  + CYN+L+    +       K ++  + ++  V PN+ T N 
Sbjct: 151 EMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEM-LDDMVTPNIFTLNT 209

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           M+NG CK G   E      ++ +     D+FTY S I G C+  NV+ A  ++  M   G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAI 330
              + V+Y  +I GFC A ++ E  +L+  M    C   V +Y ++I  L + G+  EA+
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
           ++++ + EK+C  +  T+ VLI  LC++   + A +ILN + E G               
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G  A A  +++ M+ + C  NA T N L+ GF +   +  A+ L  +M  +   P V
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YN LI+G CK    G AY  +  M E G  PD  TYS+ I+ LC+   ++ A  L   
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG------ 547
             +KG   +  +Y+ LI G C  GKV D   L   M    CVPN +TYN+L+DG      
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 548 -----------------------------LFKTGDCDKALEIWNHILEERLRPDIISYNI 578
                                        L K  + D+A ++++ +L     PD+  Y  
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +   CS  R+ DA   +     +GI+P T+ + + + A
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 266/582 (45%), Gaps = 62/582 (10%)

Query: 91  KALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +AL++F+ M E   C+  +         LC    F+ AK+ LN + EKGL P V +Y  +
Sbjct: 327 EALNMFKEMTEKH-CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+G  K G    AL +   M       N   YN LI GF +  +  +A  +  ++ +E  
Sbjct: 386 IDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM-LERK 444

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PNVVTYN++I+G CK G      ++   M ++    D +TY  FI  LCK G VE A 
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            ++  + E GI  + V Y+ +IDG+C+ GK+ +   L + M   GC+ N ++YN LI G 
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +     EA  + +++ +++    + T+ +LI+ L K+   ++A  + +++   G     
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GRL DA  L+ +M+  G   +       ++ + +   ++ A  + K 
Sbjct: 625 FIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684

Query: 424 MSRKGCSPTVVSYNTLINGLCKVE-------------RFGEA------------YSFVKE 458
           M   GC P+  +Y+ LI  L   +               G A            Y F  +
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLD 744

Query: 459 ----MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M E G  P+  TY   I GLC+   +++A +L     +KG +P+  +YN L+   C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G   +A++    M +   +P+L +   L+ GL+  G+ +KA  ++   L+     D +
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 575 SYNITLKGLCS---CSRMSDAFEFLNDALCRGILPTTITWHI 613
            + + + GL       + SD F  +    C+ I P T +  I
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQ-IHPKTYSMLI 905



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 262/618 (42%), Gaps = 92/618 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I  Y +N   D A  +F  M       NE+ +       C  R+ ++A +  + + E 
Sbjct: 244 SLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED 303

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
              P V +Y  +I  L + G    AL +F EM E+  + NV  Y +LI    +  ++  A
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K+I   + +E  + P+VVTYN +I+G CK G     LE+   M+ N    ++ TY   I 
Sbjct: 364 KKILNGM-LEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELIL 422

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C+  N+  A  +  +M+E  +  + VTYN +I G C+ G +   ++L  +M   G + 
Sbjct: 423 GFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVP 482

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +  +Y++ I  L + G V+EA S++E L+EK   A+   +  LI+G CK           
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK----------- 531

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G+++D   L+++M   GC  N+ T NSL++G+ +    + A  L   M ++ 
Sbjct: 532 -------VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   +Y  LI+ L K + F +A+    +ML  G  PD+  Y+  I+  C   ++  A 
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644

Query: 489 KLCCQFLQK-----------------------------------GFTPDVTMYNILIHGL 513
            L C+   K                                   G  P    Y+ LI  L
Sbjct: 645 VLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704

Query: 514 CSAGK-----------------------------VEDALQLYSNMKKRNCVPNLVTYNTL 544
            +A                                E  L L+  M +  C PN  TY   
Sbjct: 705 SNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKF 764

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + GL K G  + A  +++H+ E+   P+   YN  L   C      +A  +L+  +    
Sbjct: 765 ITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRH 824

Query: 605 LPTTITWHILVRAVMNNG 622
           LP   +  +L+  + + G
Sbjct: 825 LPHLDSCKLLLCGLYDEG 842



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 250/571 (43%), Gaps = 40/571 (7%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS---------------R 59
           + N HT   L  S   +  +  +  + + +L + + P +V + +                
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILC 111
           IL L+E   C         +I  + +     KA+ +  +M E         +       C
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQC 460

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++     A + L+ + E GL PD ++Y   I+ L K G +  A ++F+ + E+G++ N V
Sbjct: 461 KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ LIDG+ K G     + + ++++    V PN +TYN +I+G CK   F E   + D 
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV-PNSITYNSLIDGYCKEKNFKEARLLVDI 579

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M K + E  + TY   I  L K    + A  ++ +M+ +G   D   Y A I  +C  G+
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +K+   L   M  KG + + + Y + I      G +D A  I + + E  C     T+  
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS-------------LVNRMDKHGCKLN 397
           LI  L       K +   +E+ +   G  ++  S             L  +M +HGC  N
Sbjct: 700 LIKHLSNAK--PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPN 757

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           A T    + G  +   LE A  LF  M  KG SP    YN+L+   C++  +GEA  ++ 
Sbjct: 758 ANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLD 817

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+E    P + +  LL+ GL      + A ++ C FLQ  +  D  ++ +LI GL   G
Sbjct: 818 IMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKG 877

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             +    L+  M+ + C  +  TY+ L++G 
Sbjct: 878 LSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 220/486 (45%), Gaps = 89/486 (18%)

Query: 150 DLLGALAVFDEM-----FERGVETNVVCYNILI-DGFFKKGDYMRAKEIWERLVMETSVY 203
           D   ALA F+ +     F+  V+++V   NIL+ +G+ +  + MR   I      E +++
Sbjct: 89  DPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALF 148

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-------YCSFIHGLCKAGN 256
                                 LEM   M    R  D+F        Y   +  L +   
Sbjct: 149 ---------------------VLEMLRSMN---RRVDAFKFKLTLRCYNMLLMLLSRFLM 184

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           ++  + VY EM++  +  +  T N M++G+C+ G                  NVV   + 
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLG------------------NVVEAELY 226

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  +++ G                 + D+ T+  LI G C+N  ++ A  I         
Sbjct: 227 VSKIVQAG----------------LSLDTFTYTSLILGYCRNKNVDAANAIF-------- 262

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                  S+ N+    GC  N  +  +L++GF +A +++ A+ LF +M    C PTV +Y
Sbjct: 263 ------LSMPNK----GCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             +I  LC++ R  EA +  KEM EK  +P++ TY++LI  LC+    D A K+    L+
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           KG  P V  YN LI G C  G    AL++ S M+  NC PN  TYN L+ G  +  +  K
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHK 432

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A+ + + +LE +L+P++++YNI + G C    +  A++ L+     G++P   T+ + + 
Sbjct: 433 AMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID 492

Query: 617 AVMNNG 622
            +   G
Sbjct: 493 TLCKRG 498



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 6/285 (2%)

Query: 347 THGVLINGLCKNGYLNKA--IQIL----NEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           +H  ++N L  NGYL  A  ++IL     +  E     L    S+  R+D    KL    
Sbjct: 112 SHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRC 171

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L+    +   ++    ++ EM     +P + + NT++NG CK+    EA  +V +++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G   D  TY+ LI G C++K +D A  +      KG   +   Y  LIHG C A +V+
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +AL+L+S M + NC P + TY  ++  L + G   +AL ++  + E+  +P++ +Y + +
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             LC  S   DA + LN  L +G++P+ +T++ L+      G S 
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 256/520 (49%), Gaps = 27/520 (5%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA     KR  E     L+   E G  PDV+SY  ++  L   G    A  +   M E 
Sbjct: 157 CEA-----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 165 GV--ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G     NVV YN +IDGFFK+GD  +A ++++ +V +  + P++VTYN +++ LCK    
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV-QRGIPPDLVTYNSVVHALCKARAM 270

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+      +M       +++TY + I+G    G  + A RV++EM    I  D VT + +
Sbjct: 271 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +   C+ GKIKE  ++++ M  KG   +V SYNI++ G    G + +   +++L+     
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T  VLI      G L+KA+ I NE                  M  HG K +  T 
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNE------------------MRDHGVKPDVVTY 432

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
            +++    +  K+++A+  F +M  +G +P   +YN LI G C      +A   + E++ 
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G   D++ +S +IN LC+  ++  A  +    +  G  PD  +Y++L+ G C  GK+E 
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 552

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+++  M      PN+V Y TL++G  K G  D+ L ++  +L+  ++P  I Y+I + 
Sbjct: 553 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 612

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           GL    R   A    ++    GI     T++I++R +  N
Sbjct: 613 GLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKN 652



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 300/665 (45%), Gaps = 85/665 (12%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V++                 +A  
Sbjct: 112 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVNII----------------IANH 151

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 152 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    P+V +Y TVI+G  K GD+  A  +F EM +RG+  ++V YN ++    K    M
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAM 270

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V PN  TYN +I G    G++ E + ++  M+++    D  T    
Sbjct: 271 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  LCK G ++ A  V+  M   G   D  +YN M++G+   G + +  +L+++M   G 
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 308 L------------------------------------NVVSYNILIRGLLENGKVDEAIS 331
                                                +VV+Y  +I  L   GK+D+A+ 
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--------------- 376
            +  + ++    D   +  LI G C +G L KA ++++E+   G                
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR+ DA ++ +     G   +A   + LM+G+    K+E A+ +F  M   G  P VV
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 570

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
            Y TL+NG CK+ R  E  S  +EML++G KP  I YS++I+GL Q+ +   A     + 
Sbjct: 571 VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 630

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G   D+  YNI++ GL      ++A+ L+  ++  N   N++T NT++DG+F+T   
Sbjct: 631 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 690

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++A +++  I   RL P +++Y+I +  L     + +A +  +     G  P +   + +
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 750

Query: 615 VRAVM 619
           VR ++
Sbjct: 751 VRELL 755



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 246/517 (47%), Gaps = 21/517 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ ++     ++ G  ++     AL +      E G   +V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSV-YPNVVTYNVMINGLCKCGRFDECLEMW 229
             Y+IL+     +G   +A ++   +    +V  PNVV YN +I+G  K G  ++  +++
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 242

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  TY S +H LCKA  ++ AE   R+MV   +  +  TYN +I G+   
Sbjct: 243 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 302

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ KE   +++ M R   L +VV+ ++L+  L + GK+ EA  +++ +  K  N D  ++
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++NG     Y  K             G L D   L + M   G   + YT N L+  +
Sbjct: 363 NIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C    +  A +L  + +  G   D+  ++ +I+ LC  G+V DA  ++  
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
                  P+ V Y+ LMDG    G  +KAL +++ ++   + P+++ Y   + G C   R
Sbjct: 525 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 584

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + +      + L RGI P+TI + I++  +   G + 
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 197/411 (47%), Gaps = 20/411 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA    N + + G+KPDV +Y TVI  L + G +  A+  F++M ++GV  +   YN 
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI GF   G  ++AKE+    +M   ++ ++V ++ +IN LCK GR  +   ++D     
Sbjct: 470 LIQGFCTHGSLLKAKELISE-IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D+  Y   + G C  G +E A RV+  MV +GI  + V Y  +++G+C+ G+I E 
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             L+  M ++G   + + Y+I+I GL + G+   A   +  + E     D  T+ +++ G
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L KN   ++AI +  E+                       K+N  T N++++G  Q  ++
Sbjct: 649 LFKNRCFDEAIFLFKELR------------------AMNVKINIITLNTMIDGMFQTRRV 690

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  LF  +SR    P+VV+Y+ +I  L K     EA      M   G +P+    + +
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 750

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           +  L +  +I  A     +  ++ F+ +     +L+    S G   + ++ 
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRF 801



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S TY   +    +A   E A   + +++ +G+ V+ +  N +++GFC A +  E  + L 
Sbjct: 111 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILL 170

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SY+IL++ L + GK  +A  +  ++ E    C+ +   +  +I+G  
Sbjct: 171 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFF 230

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T NS+++   +A  ++ 
Sbjct: 231 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYNSVVHALCKARAMDK 272

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  K   P   +YN LI G     ++ EA    KEM      PD++T S+L+ 
Sbjct: 273 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  YNI+++G  + G + D   L+  M      P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  T+N L+      G  DKA+ I+N + +  ++PD+++Y   +  LC   +M DA E  
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G+ P    ++ L++    +G+
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGS 479


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/476 (31%), Positives = 241/476 (50%), Gaps = 7/476 (1%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY-- 186
           +G  P    + ++++   +SGD   A  +  +M   G +   V YNILI G     D   
Sbjct: 5   EGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPS 64

Query: 187 MRAKEIWERL---VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           M    + ER    ++E  V  N V        LC  G+F++   +   M       DS T
Sbjct: 65  MEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   I  LC A  VE A ++++EM  +GI  D  TY  ++D FC+ G I++    ++ M 
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           + GC  NVV+Y  LI   L+  K+  A  I+E++    C  +  T+  LI+G CK G   
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           KA QI   ++   +  + D       +D    + N  T  +L++G  +A K++ A  L +
Sbjct: 245 KACQIYARMK-NDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            MS +GC P  + Y+ LI+G CKV +  EA     +ML  G  P++ TYS LI+ L + K
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++D+ALK+  + L+    P+V +Y  ++ GLC  GK ++A +L   M+++ C PN+VTY 
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            ++DG  K G  D+ LE+   +  +   P+ I+Y + +   C+   + DA + L +
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 255/513 (49%), Gaps = 41/513 (7%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC   + EKA +    +   G+ PDVY+Y T+++   K G +  A   FDEM + G  
Sbjct: 130 GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            NVV Y  LI  + K     RA EI+E +++     PN+VTY  +I+G CK G  ++  +
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFE-MMLSNGCVPNIVTYTALIDGHCKAGETEKACQ 248

Query: 228 MWDRMKKNE-----------------REKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++ RMK ++                 +E +  TY + + GLCKA  V+ A  +   M   
Sbjct: 249 IYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE 308

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           G   + + Y+A+IDGFC+ GK+ E  E++  M   GC  NV +Y+ LI  L ++ ++D A
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLA 368

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + +   + E +C  +   +  +++GLCK                   G+  +A  L+  M
Sbjct: 369 LKVLTKMLENSCAPNVVIYTEMVDGLCK------------------VGKTDEAYRLMLMM 410

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           ++ GC  N  T  ++++GF +A +++  + L + M+ KGC+P  ++Y  LIN  C     
Sbjct: 411 EEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLL 470

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A+  ++EM +  W   +  Y  +I G   S +   +L L  +  + G  P + +Y +L
Sbjct: 471 DDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLL 528

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I     AG++E AL+L+  +   +      TY +L++ L      DKA ++++ +     
Sbjct: 529 IDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGF 587

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            P++      +KGL    +  +A + L+D++C+
Sbjct: 588 VPELSMLVCLIKGLLRVGKWEEALQ-LSDSICQ 619



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 264/599 (44%), Gaps = 84/599 (14%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG------AL 155
           IF       CR   +  A + L  +   G +P    Y  +I G+  + DL        A 
Sbjct: 13  IFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAE 72

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
             ++EM E GV  N V            G + +A  +  R +M     P+  TY+ +I  
Sbjct: 73  RAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVI-REMMSKGFIPDSSTYSKVIGY 131

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC   + ++  +++  MK+N    D +TY + +   CK G +E A   + EM + G   +
Sbjct: 132 LCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPN 191

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            VTY A+I  + +  K+    E++E+M   GC+ N+V+Y  LI G  + G+ ++A  I+ 
Sbjct: 192 VVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYA 251

Query: 335 LLREKNCN-----------------ADSTTHGVLINGLCKNGYLNKAIQILNEVE-EGGE 376
            ++    +                  +  T+G L++GLCK   + +A  +L  +  EG E
Sbjct: 252 RMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCE 311

Query: 377 ----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G+L +A  +  +M  HGC  N YT +SL++   +  +L+ A+ +
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             +M    C+P VV Y  +++GLCKV +  EAY  +  M EKG  P+++TY+ +I+G  +
Sbjct: 372 LTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR-------- 532
           + ++D  L+L      KG  P+   Y +LI+  C+AG ++DA +L   MK+         
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491

Query: 533 -------------------------NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
                                      VP L  Y  L+D   K G  + ALE     L E
Sbjct: 492 YRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE-----LHE 546

Query: 568 RLRPDIISYNIT----LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L     +Y  T    ++ L    ++  AF+  +D   RG +P       L++ ++  G
Sbjct: 547 ELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVG 605



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 227/479 (47%), Gaps = 43/479 (8%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G   + + +N L+  + + GDY  A ++ +++V+     P  V YN++I G+C   
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVI-CGYQPGYVVYNILIGGICSTE 60

Query: 221 RFD--ECLEMWDRMKKNEREK----DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
                E + + +R      E     +    C+F   LC  G  E A  V REM+  G   
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           D+ TY+ +I   C A K+++ F+L++ M R G   +V +Y  L+    + G +++A + +
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           + +++  C  +  T+  LI+   K   L++A    NE+ E               M  +G
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRA----NEIFE--------------MMLSNG 222

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS-----------------PTVVSY 436
           C  N  T  +L++G  +A + E A  ++  M                       P VV+Y
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
             L++GLCK  +  EA   ++ M  +G +P+ I Y  LI+G C+  K+D A ++  + L 
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G +P+V  Y+ LI  L    +++ AL++ + M + +C PN+V Y  ++DGL K G  D+
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           A  +   + E+   P++++Y   + G     R+    E L     +G  P  IT+ +L+
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 158/383 (41%), Gaps = 69/383 (18%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           + DS  +EP        +  ++  L     V     +LE + ++ C   + +  ++I  +
Sbjct: 269 IVDSELKEPNVV----TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
            K    D+A +VF +M                              G  P+VY+Y ++I+
Sbjct: 325 CKVGKLDEAQEVFTKM---------------------------LGHGCSPNVYTYSSLID 357

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM--ETS 201
            L K   L  AL V  +M E     NVV Y  ++DG  K G   +  E +  ++M  E  
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG---KTDEAYRLMLMMEEKG 414

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
            YPNVVTY  MI+G  K GR D CLE+   M       +  TY   I+  C AG ++ A 
Sbjct: 415 CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAH 474

Query: 262 RV---------------YREMVE--SGIFVDAV----------------TYNAMIDGFCR 288
           ++               YR+++E  S  FV ++                 Y  +ID F +
Sbjct: 475 KLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIK 534

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           AG+++   EL E +         +Y  LI  L    KVD+A  ++  +  +    + +  
Sbjct: 535 AGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSML 594

Query: 349 GVLINGLCKNGYLNKAIQILNEV 371
             LI GL + G   +A+Q+ + +
Sbjct: 595 VCLIKGLLRVGKWEEALQLSDSI 617


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 250/494 (50%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+Y  +IN   +   L  ALAV  +M + G E N+V  + L++G+        A
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++ + T   PN VT+N +I+GL    +  E + + DRM     + D  TY   ++
Sbjct: 171 VALVDQMFV-TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK G+ + A  +  +M +  +    + Y  +IDG C+   + +   L++ M  KG   
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+Y+ LI  L   G+  +A  +   + E+  N D  T   LI+   K           
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK----------- 338

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  EG+L +A  L + M K     +  T +SL+NGF    +L+ A  +F+ M  K 
Sbjct: 339 -------EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P VVSY+TLI G CK +R  E     +EM ++G   + +TY+ LI GL Q+   DMA 
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           ++  + +  G  P++  YN L+ GLC  GK+E A+ ++  +++    P + TYN +++G+
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  +   +++ ++  + ++PD+++YN  + G C      +A     +    G LP +
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 609 ITWHILVRAVMNNG 622
             ++ L+RA + +G
Sbjct: 572 GCYNTLIRARLRDG 585



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 253/493 (51%), Gaps = 22/493 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       +++ ++M   G+  N   Y+ILI+ F ++     A  +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    PN+VT + ++NG C   R  E + + D+M     + ++ T+ + IHGL 
Sbjct: 139 LGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NV 310
                  A  +   MV  G   D VTY  +++G C+ G     F L   M  +G L   V
Sbjct: 198 LHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM-EQGKLEPGV 256

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           + Y  +I GL +N  +D+A+++++ +  K    +  T+  LI+ LC              
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN------------- 303

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR +DA+ L++ M +     + +T ++L++ F++  KL  A  L+ EM ++   
Sbjct: 304 -----YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P++V+Y++LING C  +R  EA    + M+ K   PD+++YS LI G C++K++D  ++L
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  Q+G   +   Y  LI GL  AG  + A +++  M      PN++TYNTL+DGL K
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  +KA+ ++ ++   ++ P I +YNI ++G+C   ++ D ++   +   +G+ P  + 
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 611 WHILVRAVMNNGA 623
           ++ ++      G+
Sbjct: 539 YNTMISGFCRKGS 551



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 232/451 (51%), Gaps = 20/451 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++  +A   ++ ++  G +P+  ++ T+I+GL        A+A+ D M  +G + ++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y ++++G  K+GD   A  +  ++  +  + P V+ Y  +I+GLCK    D+ L ++ 
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKM-EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFK 280

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+      +  TY S I  LC  G    A R+  +M+E  I  D  T++A+ID F + G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+ E  +L++ M ++    ++V+Y+ LI G   + ++DEA  ++E +  K+C  D  ++ 
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYS 400

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI G CK             V+EG E        L   M + G   N  T  +L+ G  
Sbjct: 401 TLIKGFCKA----------KRVDEGME--------LFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           QA   + A  +FKEM   G  P +++YNTL++GLCK  +  +A    + +     +P + 
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I G+C++ K++    L C    KG  PDV  YN +I G C  G  E+A  L+  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           K+   +PN   YNTL+    + GD + + E+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAEL 593



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 213/415 (51%), Gaps = 22/415 (5%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   ++ +  KG +PD+ +YG V+NGL K GD   A  + ++M +  +E  V+ Y  +I
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 178 DGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           DG  K      A  +++   MET  + PNVVTY+ +I+ LC  GR+ +   +   M + +
Sbjct: 264 DGLCKNKHMDDALNLFKE--METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D FT+ + I    K G +  AE++Y EMV+  I    VTY+++I+GFC   ++ E  
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           +++E M  K C  +VVSY+ LI+G  +  +VDE + ++  + ++    ++ T+  LI GL
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            + G  + A +I  E                  M   G   N  T N+L++G  +  KLE
Sbjct: 442 FQAGDCDMAQEIFKE------------------MVSDGVPPNIMTYNTLLDGLCKNGKLE 483

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ +F+ + R    PT+ +YN +I G+CK  +  + +     +  KG KPD++ Y+ +I
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           +G C+    + A  L  +  + G  P+   YN LI      G  E + +L   M+
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 219/465 (47%), Gaps = 60/465 (12%)

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           NGL +  + D+ + ++  M K+        +   +  + K    +    +  +M   G+ 
Sbjct: 55  NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 274 VDAVTYNAMI-----------------------------------DGFCRAGKIKECFEL 298
            +  TY+ +I                                   +G+C + +I E   L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   G   N V++N LI GL  + K  EA+++ + +  K C  D  T+GV++NGLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 358 NGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYT 400
            G  + A  +LN++E+G                     + DA +L   M+  G + N  T
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            +SL++      +  +A  L  +M  +  +P V +++ LI+   K  +  EA     EM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           ++   P ++TYS LING C   ++D A ++    + K   PDV  Y+ LI G C A +V+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           + ++L+  M +R  V N VTY TL+ GLF+ GDCD A EI+  ++ + + P+I++YN  L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 581 KGLCSCSRMSDA---FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC   ++  A   FE+L  +    + PT  T++I++  +   G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRS---KMEPTIYTYNIMIEGMCKAG 515


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 293/633 (46%), Gaps = 50/633 (7%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V +                 +A  
Sbjct: 112 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVDII----------------IANH 151

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    PDV +Y TVI+G  K GD+  A  +F EM +RG+  + V Y+ ++    K    M
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK-ARAM 270

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V PN  TYN +I G    G++ E + ++  M++     D  T+   
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNML 330

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  LCK G ++ A  V+  M   G   D  +YN M++G+   G + +  +L+++M   G 
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 308 LNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             V+ ++N+LI+     G +D+A+ I+  +R+     +  T+  +I  LC+ G ++ A++
Sbjct: 391 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             N++ + G                  G L  A  L++ +  +G  L+    +S++N   
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++ +A  +F      G  PT V Y+ L++G C V +  +A      M+  G +P+ +
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+NG C+  +ID  L L  + LQKG  P   +YNI+I GL  AG+   A   +  M
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +     N  TY+ ++ GLFK    D+A+ ++  +    ++ DII+ N  + G+    R+
Sbjct: 631 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 690

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A +        G++P  +T+ I++  ++  G
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNLIKEG 723



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 285/617 (46%), Gaps = 65/617 (10%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +I A  LL      K    AL +    T E G       +  +L+ L D         +L
Sbjct: 146 IIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 205

Query: 62  ELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILC 111
            ++      C  DV    +VI  + K    +KA D+F+ M +         +      LC
Sbjct: 206 RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R  +KA+ FL  +  KG+ P+ ++Y  +I G   +G    A+ VF EM  + +  +VV
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 325

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING---------------- 215
            +N+L+    K G    A+++++ + M+    P+V +YN+M+NG                
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDL 384

Query: 216 ---------LCK----------CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                    +C           CG  D+ + +++ M+ +  + +  TY + I  LC+ G 
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNI 315
           ++ A   + +M++ G+  D   Y+ +I GFC  G + +  EL  E+M     L++V ++ 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I  L + G+V +A +I++L      +  +  + +L++G C  G + KA+++ +      
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA----- 559

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G + N     +L+NG+ +  +++  + LF+EM +KG  P+ + 
Sbjct: 560 -------------MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +I+GL +  R   A     EM E G   +  TYS+++ GL +++  D A+ L  +  
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                 D+   N +I G+    +VE+A  L++++ +   VP +VTY+ ++  L K G  +
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 556 KALEIWNHILEERLRPD 572
           +A ++++ +      PD
Sbjct: 727 EAEDMFSSMQNAGCEPD 743



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/572 (23%), Positives = 256/572 (44%), Gaps = 45/572 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIE--------------IQKCYCPEDVALS-VIQAYG 84
           LF  +++R I P  V + S +  L +              + K   P +   + +I  Y 
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                 +A+ VF+ M           F    G LC+  + ++A+   +++  KG  PDV+
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++NG    G L+    +FD M   G+   +  +N+LI  +   G   +A  I+  +
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  V PNV+TY  +I  LC+ G+ D+ +E +++M       D + Y   I G C  G+
Sbjct: 421 -RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +  A+ +  E++ +G+ +D V ++++I+  C+ G++ +   ++++    G     V Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ G    GK+++A+ +++ +       +   +G L+NG CK G +++ + +  E+ + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR   A    + M + G  +N  T + ++ G  +    + AI
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           FLFKE+        +++ NT+I G+ +  R  EA      +   G  P ++TYS++I  L
Sbjct: 660 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +   ++ A  +       G  PD  + N ++  L    ++  A    S + +RN     
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 779

Query: 539 VTYNTLMDGLFKTGDCDKALEIWN---HILEE 567
           +T   L+D     G C + +       H L E
Sbjct: 780 LTTMLLVDLFSSKGTCREHIRFLPAKYHFLAE 811



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 185/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S TY   +    +A   E A   + +++ +G+ VD +  N ++ GFC A +  E  + L 
Sbjct: 111 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILL 170

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SY+IL++ L + GK  +A  +  ++ E    C+ D   +  +I+G  
Sbjct: 171 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFF 230

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T +S+++   +A  ++ 
Sbjct: 231 KEGDVNKACDLFKE------------------MVQRGIPPDFVTYSSVVHALCKARAMDK 272

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  KG  P   +YN LI G     ++ EA    KEM  +   PD++T+++L+ 
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMG 332

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  YNI+++G  + G + D   L+  M      P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
            + T+N L+      G  DKA+ I+N + +  ++P++++Y   +  LC   +M DA E  
Sbjct: 393 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF 452

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G+ P    +H L++    +G+
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGS 479


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 239/465 (51%), Gaps = 21/465 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A     ++ EKG+ P + +  ++++  +K      A  ++ EMF   ++++V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
             +NI+I+   K+G   +AK+      METS V PN+VTYN +++G C  GR +    + 
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGH--METSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             MK+ + E DSFTY S I G+CK G +E A +++ EMV+ G+   AV YN +IDGFC  
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 290 GKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +       + M +KG    +S YN LI  L    + DEA  + + ++EK  + D+ T+
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +LING C+     KA  + +E+   G                 + R+ +A  L  ++  
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +    N+L++G    S ++ A  L K+M R    P  V++NT++ G C+  +  E
Sbjct: 460 EGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM  +G KPD I+++ LI+G  +   I  A ++  + L  GF P V  YN L+ 
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           GLC   + + A +L   M  +   P+  TY TL++G+ K    D+
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 208/413 (50%), Gaps = 20/413 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC++ + +KAK F+  +   G+KP++ +Y T+++G   SG +  A A+   M 
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            + +E +   Y  LI G  K+G    A +I+E +V +  + P+ V YN +I+G C  G  
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV-QKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D      D M K        TY S IH L      + AE + +E+ E GI  DA+TYN +
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+CR    K+ F L + M   G      +Y  L+  L +  ++ EA  +++ +  +  
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D      LI+G C N  +  A ++L +                  MD+     +  T 
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKD------------------MDRMKVPPDEVTF 504

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++M G  +  K+E A  LF EM R+G  P  +S+NTLI+G  +     +A+    EML+
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            G+ P ++TY+ L+ GLC++++ D+A +L  + + KG TPD T Y  LI G+ 
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 220/452 (48%), Gaps = 20/452 (4%)

Query: 190 KEIWERLVMETSV--YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +EI+E L        + + + ++ +I   C   R DE  E +  MK+        T  S 
Sbjct: 133 REIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSL 192

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +    K    E A  +Y EM    I     T+N MI+  C+ GK+K+  +    M   G 
Sbjct: 193 LSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGV 252

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N+V+YN ++ G   +G+V+ A +I   ++ +    DS T+G LI+G+CK G L +A +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           I  E+ + G                 +G L  A++  + M K G      T NSL++   
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              + + A  + KE+  KG SP  ++YN LING C+     +A+    EML  G KP   
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ L++ L +  ++  A  L  +   +G  PDV M+N LI G CS   V+ A +L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +    P+ VT+NT+M G  + G  ++A E+++ +    ++PD IS+N  + G      +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            DAF   N+ L  G  PT +T++ LV+ +  N
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 222/454 (48%), Gaps = 20/454 (4%)

Query: 185 DYMRAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           D  RA E +E    + E  V P + T N +++   K  R +    ++  M +   +   +
Sbjct: 163 DMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVY 222

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I+ LCK G ++ A+     M  SG+  + VTYN ++ G+C +G+++    +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            R+    +  +Y  LI G+ + G+++EA  I+E + +K     +  +  LI+G C  G L
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 362 NKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + A    +E+ + G                 E R  +A  ++  + + G   +A T N L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG+ + +  + A  L  EM   G  PT  +Y +L++ L K  R  EA    K++  +G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD+I ++ LI+G C +  +  A +L     +    PD   +N ++ G C  GKVE+A +
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L+  MK+R   P+ +++NTL+ G  + GD   A  + N +L+    P +++YN  ++GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
                  A E L + + +G+ P   T+  L+  +
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%)

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I +  LI   C   + D A +      +KG  P +   N L+       + E A  LY+ 
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +     ++ T+N +++ L K G   KA +   H+    ++P+I++YN  + G CS  R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A   L     + I P + T+  L+  +   G
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG 305


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/560 (27%), Positives = 272/560 (48%), Gaps = 56/560 (10%)

Query: 74  DVALSVIQAY-GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           D+A  +I+   GK  +PD +          +      LC   + EKA      +   G+ 
Sbjct: 270 DMAFQIIKVMMGKGFVPDTS---------TYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PDVY+Y  +I+   K+G +  A + FDEM   G   NVV Y  L+  + K     +A +I
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE-----------REKDS 241
           + R++ +    PN +TY+ +++GLCK G   +  E++ ++               +  DS
Sbjct: 381 FNRMI-DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS 439

Query: 242 F-----TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
                 TY + I GLCKA  V  A+ +   M+ +G   + + Y+A+IDGFC+ GKI    
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 297 ELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           E++  M + G L  V +Y  LI  + ++ ++D A+ +   + E +C  +  T+  +I+GL
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C+ G   KA+++L+ +EE                   GC  N  T  +L++G  ++ K++
Sbjct: 560 CRIGECQKALKLLSMMEE------------------KGCSPNVVTYTALIDGLGKSGKVD 601

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            ++ LF +MS KGC+P  V+Y  LIN  C      EA+S + EM +  W   +  Y  ++
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVV 661

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G   SKK   +L L  +    G  P   +Y +LI     AG++E+AL+L+  M + +  
Sbjct: 662 QGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSS 719

Query: 536 PNLVT---YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            N+ +   Y +L+  L      +KA E+++ I  + + P++  +   +KGL   ++ ++A
Sbjct: 720 LNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779

Query: 593 FEFLNDALCRGILPTTITWH 612
            +     LC  I    + W 
Sbjct: 780 LQ-----LCYSICDEGVNWQ 794



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 252/496 (50%), Gaps = 14/496 (2%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +K+Q    KR +N + ++G  P+   + ++++    + D   A  +   M + G     V
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213

Query: 172 CYNILIDGF-----FKKGDYMR-AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            YNI I            D +  A++++E ++  + V   V T N     LC  G+FD  
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMGKFDMA 272

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            ++   M       D+ TY   I  LC+A  VE A  +++EM   G+  D  TY  +ID 
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDS 332

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+AG I++    ++ M   GC  NVV+Y  L+   L+  ++ +A  I+  + +  C  +
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL--NAYTCN 402
           + T+  L++GLCK G + KA ++  ++     G   +  S      KH   +  N  T  
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLI----GTSDNVGSDFYFEGKHTDSIAPNVVTYG 448

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L++G  +A K+ +A  L   M   GC P  + Y+ LI+G CKV +   A      M + 
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G+ P + TY+ LI+ + + +++D+A+K+  Q ++   TP+V  Y  +I GLC  G+ + A
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L+L S M+++ C PN+VTY  L+DGL K+G  D +L+++  +  +   P+ ++Y + +  
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINH 628

Query: 583 LCSCSRMSDAFEFLND 598
            C+   + +A   L++
Sbjct: 629 CCAAGLLDEAHSLLSE 644



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 264/586 (45%), Gaps = 52/586 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +++Q        D    V + M+E          GC A  LC++ ++  A   L  +  +
Sbjct: 45  ALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA---LVMIERE 101

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
             K D      +I+GL+++     A++    M       NVV Y  L+ GF KK      
Sbjct: 102 DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWC 161

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K I   ++M+    PN   +N +++  C    +    ++  RM           Y  FI 
Sbjct: 162 KRII-NMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIG 220

Query: 250 GLCKAGNVEG------AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
            +C    +        AE+VY EM+ S   ++ V         C  GK    F++ +VM 
Sbjct: 221 SICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMM 280

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            KG + +  +Y+ +I  L E  KV++A  +++ ++    N D  T+ +LI+  CK G + 
Sbjct: 281 GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIE 340

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +A    +E+   G                   +L  A+ + NRM   GC  N  T ++L+
Sbjct: 341 QARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALV 400

Query: 406 NGFIQASKLENAI----------------FLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           +G  +A +++ A                 F F+       +P VV+Y  LI+GLCK  + 
Sbjct: 401 DGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKV 460

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A   +  ML  G +P+ I Y  LI+G C+  KID A ++  +  + G+ P V  Y  L
Sbjct: 461 VDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSL 520

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I  +    +++ A+++ S M + +C PN+VTY  ++DGL + G+C KAL++ + + E+  
Sbjct: 521 IDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGC 580

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            P++++Y   + GL    ++  + +       +G  P  +T+ +L+
Sbjct: 581 SPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 162/393 (41%), Gaps = 61/393 (15%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + +  L  AG ++   RV +EM ESG  +D  T        C+ G+  +   + E  
Sbjct: 42  TYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIERE 101

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             K  L+ V    +I GL+E    DEAIS    +R  +C  +  T+  L+ G  K   L 
Sbjct: 102 DFK--LDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLG 159

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
              +I                  +N M K GC  N    NSL++ +  A     A  L K
Sbjct: 160 WCKRI------------------INMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLK 201

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVE----------------------------------- 447
            M+  GC P  V+YN  I  +C  E                                   
Sbjct: 202 RMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFAR 261

Query: 448 ------RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
                 +F  A+  +K M+ KG+ PD  TYS +I  LC++ K++ A  L  +    G  P
Sbjct: 262 CLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y ILI   C AG +E A   +  M+   C  N+VTY  L+    K     +A +I+
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           N +++    P+ I+Y+  + GLC    +  A E
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 188/453 (41%), Gaps = 45/453 (9%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+  TYN ++  L   G+ D    +   M ++    D FT   F   LCK G    A   
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA--- 94

Query: 264 YREMVESGIF-VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
              M+E   F +D V    MI G   A    E       M    C+ NVV+Y  L+ G L
Sbjct: 95  -LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFL 153

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE-------- 373
           +  ++     I  ++ ++ CN + +    L++  C       A ++L  + +        
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213

Query: 374 ----------GGE-----GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                     GGE       LA A  +   M    C LN     +         K + A 
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAF 273

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            + K M  KG  P   +Y+ +I  LC+  +  +A+   +EM   G  PD+ TY++LI+  
Sbjct: 274 QIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSF 333

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++  I+ A     +    G + +V  Y  L+H    A ++  A  +++ M    C PN 
Sbjct: 334 CKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNT 393

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHIL----------------EERLRPDIISYNITLKG 582
           +TY+ L+DGL K G+  KA E++  ++                 + + P++++Y   + G
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDG 453

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           LC   ++ DA E L+  L  G  P  I +  L+
Sbjct: 454 LCKAHKVVDAQELLDAMLSNGCEPNHIIYDALI 486



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 137/328 (41%), Gaps = 54/328 (16%)

Query: 63  LIEIQKC-YCPE-DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
            + + KC Y P      S+I A  K+   D A+ V  +M E   C   +         LC
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES-SCTPNVVTYTAMIDGLC 560

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R  + +KA + L+ + EKG  P+V +Y  +I+GL KSG +  +L +F +M  +G   N V
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
                                               TY V+IN  C  G  DE   +   
Sbjct: 621 ------------------------------------TYRVLINHCCAAGLLDEAHSLLSE 644

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK+    K    YCS + G  K      +  +  E+   G    A  Y  +ID F +AG+
Sbjct: 645 MKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGR 702

Query: 292 IKECFELW-EVMGRKGCLNVVS---YNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           ++E  EL  E+M     LN+ S   Y  LI+ L    ++++A  ++  +  K    + + 
Sbjct: 703 LEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSV 762

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG 375
              LI GL K    N+A+Q+   + + G
Sbjct: 763 FVCLIKGLIKVNKWNEALQLCYSICDEG 790



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 3/196 (1%)

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           E+   G  P+  +YN L+  L    +    +   KEM E G+  D  T       LC+  
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           +   AL +     ++ F  D  +   +I GL  A   ++A+     M+  +C+PN+VTY 
Sbjct: 90  RWSDALVM---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+ G  K         I N +++E   P+   +N  +   C+      A++ L      
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 603 GILPTTITWHILVRAV 618
           G  P  + ++I + ++
Sbjct: 207 GCPPGYVAYNIFIGSI 222



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 99/261 (37%), Gaps = 38/261 (14%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER---- 448
           G + +  T N+L+     A +++    + KEMS  G      +       LCK  R    
Sbjct: 35  GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94

Query: 449 ----------------------------FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
                                       F EA SF+  M      P+++TY  L+ G  +
Sbjct: 95  LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            K++    ++    +++G  P+ +++N L+H  C+A     A +L   M    C P  V 
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214

Query: 541 YNTLMDGLFKTGDCDKA--LEIWNHILEERLRPDIISYNITL----KGLCSCSRMSDAFE 594
           YN  +  +    +      L +   + EE L    +   +      + LC   +   AF+
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274

Query: 595 FLNDALCRGILPTTITWHILV 615
            +   + +G +P T T+  ++
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVI 295


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 261/562 (46%), Gaps = 63/562 (11%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F       C+  + E+A +  + + E G+ P+V ++ TVI+GL   G    A    ++M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 162 FERGVETNVVCYNILIDGFFKK---GD-YMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            ERG+E  ++ Y+IL+ G  +    GD Y   KE+ ++        PNV+ YN +I+   
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-----GFPPNVIVYNNLIDSFI 376

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           + G  ++ +E+ D M        S TY + I G CK G  + AER+ +EM+  G  V+  
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436

Query: 278 TYNA-----------------------------------MIDGFCRAGKIKECFELWEVM 302
           ++ +                                   +I G C+ GK  +  ELW   
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496

Query: 303 GRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             KG  ++  + N L+ GL E GK+DEA  I + +  + C  D  ++  LI+G C    L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A   L+E                  M K G K + YT + L+ G    +K+E AI  +
Sbjct: 557 DEAFMFLDE------------------MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +  R G  P V +Y+ +I+G CK ER  E   F  EM+ K  +P+ + Y+ LI   C+S
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++ MAL+L      KG +P+   Y  LI G+    +VE+A  L+  M+     PN+  Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+DG  K G   K   +   +  + + P+ I+Y + + G      +++A   LN+   
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778

Query: 602 RGILPTTITWHILVRAVMNNGA 623
           +GI+P +IT+   +   +  G 
Sbjct: 779 KGIVPDSITYKEFIYGYLKQGG 800



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 253/508 (49%), Gaps = 20/508 (3%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  KG+ P   +   ++  LV++ +       FD +  +GV  +V  +   I+ F K G 
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A +++ ++  E  V PNVVT+N +I+GL  CGR+DE     ++M +   E    TY 
Sbjct: 276 VEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GL +A  +  A  V +EM + G   + + YN +ID F  AG + +  E+ ++M  K
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G  L   +YN LI+G  +NG+ D A  + + +     N +  +   +I  LC +   + A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454

Query: 365 IQILNEV----EEGGEGRLADAASLVNRMDKH-------------GCKLNAYTCNSLMNG 407
           ++ + E+       G G L    S + +  KH             G  ++  T N+L++G
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A KL+ A  + KE+  +GC    VSYNTLI+G C  ++  EA+ F+ EM+++G KPD
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TYS+LI GL    K++ A++      + G  PDV  Y+++I G C A + E+  + + 
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  +N  PN V YN L+    ++G    ALE+   +  + + P+  +Y   +KG+   S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A     +    G+ P    +  L+
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALI 722



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 7/165 (4%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ---KGFTPDVTMYNILIHGLCSAGK 518
           KG  P   T ++L+  L ++ +     + CC+      KG +PDV ++   I+  C  GK
Sbjct: 220 KGMFPSKTTCNILLTSLVRANE----FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGK 275

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE+A++L+S M++    PN+VT+NT++DGL   G  D+A      ++E  + P +I+Y+I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +KGL    R+ DA+  L +   +G  P  I ++ L+ + +  G+
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 267/542 (49%), Gaps = 38/542 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K   E+A      L + G+ P+V++Y  +I+ L K+     A  +F EM  RG+E N
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            V Y ILI    K+G         D MR K I      + +VYP    YN +ING CK G
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGI------KVTVYP----YNSLINGYCKQG 422

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D    +   M K      + +Y   I GLC+ G++  A  ++REM E GI  +  T+ 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFT 482

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+I+GFC+  K+ E   L++ M     + N V++N++I G    G + +A  +++ + E 
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADA 382
               D+ T+  LI+GLC    ++KA + + ++E                    EGR  + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTET 602

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G KL+  +   ++   ++    E +  LF+EM  +G  P  + Y  +I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K E   +A +   +M+  G+ P+ +T+++LIN LC+S  +  A  LC + L     P+
Sbjct: 663 LSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN  +    + G +E A  L+S M + + + ++V++N L+ GL K G   +A+++  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKAGKIQEAIDLMR 781

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I E    PD ISY+  +  LC    ++ AFE  N+ L +G+ P  + ++I +R    +G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 623 AS 624
            S
Sbjct: 842 ES 843



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 255/522 (48%), Gaps = 65/522 (12%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P +V  ++ I A  K  M + AL +F +M +      ++   + I   C++   ++A+  
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + ++GL P   SY  +I GL ++GDL  A+ +  EM ERG+  N   +  LI+GF K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  ++++++ +++V PN VT+NVMI G C  G   +  +++D+M +   + D++
Sbjct: 491 DKKMDEAARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC    V  A     ++  S   ++  +  A++ G  R G+  E + LW+ M
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609

Query: 303 GRKGC-LNVVSYNILI----------------RGLLENG-KVD----------------- 327
             +G  L++VS+ I++                R + E G K D                 
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 328 -EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A++ W+ +     + ++ TH VLIN LCK+GYL  A  +  E+  G            
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----------- 718

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                     N +T N  ++ F     +E A  L   M  +G   ++VS+N LI GLCK 
Sbjct: 719 -------VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA   ++++ E G+ PD I+YS +I+ LC+   I+ A +L  + L KG  PDV  Y
Sbjct: 771 GKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           NI I      G+ + AL +Y+NM +    PN  TY  L+ G+
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 242/549 (44%), Gaps = 55/549 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + + + G+  D Y Y   I    +S +L GA  +   M   GV+ +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD------ 223
            V YN+L+ G  K      A E+ + +++   V  + VTY  ++ G C+    +      
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 224 -------------ECLEMWDRMKKNEREKDSFT----------------YCSFIHGLCKA 254
                         C  M D ++K E  +++F+                Y + I  LCK 
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
              + A+R+++EM   G+  + VTY  +I   C+ G I++   L++ M  KG  + V  Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + G +D A  +   + ++     + ++  LI GLC+NG L+ A+++  E+ E
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              G   N YT  +L+NGF +  K++ A  LF +M      P  
Sbjct: 472 ------------------RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V++N +I G C V    +A+    +M+E G KPD  TY  LI+GLC +  +  A +    
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                   +      L++GL   G+  +   L+  M  R    +LV++  ++    K  D
Sbjct: 574 LENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +K+  ++  + E+ ++PD I Y   +  L     M  A    +  +  G  P T+T  +
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTV 693

Query: 614 LVRAVMNNG 622
           L+  +  +G
Sbjct: 694 LINNLCKSG 702



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 236/507 (46%), Gaps = 19/507 (3%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+   ++  LVK      A  +FD+M + GV  +   Y   I  + +  +   A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           + +  R+  E  V  + V YNV++ GLCK  R  E +E+ + M       D  TY + ++
Sbjct: 218 RGLVVRMESE-GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C+   +E A R+  +M+  G        + MID   +   ++E F L   +G  G + 
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +YN LI  L +N + D+A  +++ +  +    +  T+ +LI+ LCK G +  A+ + 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +++ + G                 +G L  A  L++ M K G    A + + L+ G  + 
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L +A+ L +EM+ +G +    ++  LING CK ++  EA     +M++    P+ +T+
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +++I G C    I  A +L  Q ++ G  PD   Y  LI GLC    V  A +  ++++ 
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              V N  +   L+ GLF+ G   +   +W+ +    ++ D++S+ I +           
Sbjct: 577 SYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 592 AFEFLNDALCRGILPTTITWHILVRAV 618
           +     +   +G+ P  I +  ++ A+
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDAL 663



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 197/404 (48%), Gaps = 19/404 (4%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +T    +  L K      A  ++ +M++SG+ +D   Y A I  +C +  +     L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G   + V YN+L+ GL +N +V EA+ +  ++      AD  T+  L+ G C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 359 GYLNKAIQILNE----------------VEEGGEGRLADAA-SLVNRMDKHGCKLNAYTC 401
             L  A++I ++                ++E  +  L + A SL  ++   G   N +  
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L++   +  + ++A  LFKEM+ +G  P  V+Y  LI+ LCK     +A     +M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG K  +  Y+ LING C+   +D A  L    +++G TP    Y+ LI GLC  G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A++L+  M +R    N  T+  L++G  K    D+A  +++ +++  + P+ +++N+ ++
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
           G C    +  AF+  +  +  G+ P   T+  L+  + + +G S
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  +N YT + ++   ++  +   A  LF +M + G       Y   I   C+      A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M  +G K   + Y++L+ GLC++ ++  A+++    +  G T D   Y  L++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C   ++E AL++  +M +   VP+    + ++D L K    ++A  +   + +  + P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +YN  +  LC   R  DA     +   RG+ P  +T+ IL+ A+   G
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 231/460 (50%), Gaps = 21/460 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + +V   N L+D F +   +  A  + +   + T+  P+V T+NV+I G C     +E
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKN-ELATTFLPDVETWNVLITGYCLAREPEE 112

Query: 225 CLEMWDRMKKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              +   M+++     S  T+   +HGLCK+G V  A   +     +G  +D  TY A++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           D   +  KI++   L E +   GC   + +YN L+ GL + G+++EAI +   + +  C 
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T+  LI+GL                  G E R  +A  L   M   G  L+     
Sbjct: 233 PDVVTYTSLIDGL------------------GKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L+ G +QA K+  A  ++K M+ +GC P VV+ +T+I+GLCK  R G A    K M  +
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P+ + YS LI+GLC+++K+D AL++  Q  +   TPD   YNILI GLC +G VE A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
              +  M +  C P++ TYN L+ G  K G+ D A  +++ +      P++++Y   + G
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           LC   +++ A  +      RG  P +  +  LV  +  +G
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 250/501 (49%), Gaps = 22/501 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVE 167
           +  R ++  +A   L +       PDV ++  +I G   + +   A AV  EM E  GV 
Sbjct: 68  VFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVA 127

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            ++  +N+++ G  K G  + A + +E          ++ TY  +++ L K  +  + + 
Sbjct: 128 PSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTI-DIHTYTAIVDWLAKNKKIQDAVA 186

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + +++  N       TY + ++GLCK G +E A  + R++V++G   D VTY ++IDG  
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246

Query: 288 RAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +  +  E ++L++ M  +G  L+ V Y  LIRGLL+ GK+ +A S+++ +  + C  D  
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAA-SLVNRM 389
           T   +I+GLCK G +  A++I   +E  G                + R  D A  ++ +M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K  C  +  T N L++G  ++  +E A   F EM   GC P V +YN L++G CK    
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A     +M      P+++TY  LI+GLC+ +++  A        ++G  PD  +Y+ L
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSL 486

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + GLC +GK+E    L+  M +R+ V N  T   L+  L K    D+A+ ++N I +E +
Sbjct: 487 VDGLCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545

Query: 570 RPDIISYNITLKGLCSCSRMS 590
            P   +YN  +  L   ++++
Sbjct: 546 -PHPYAYNSIISTLIKSAKVN 565



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 1/233 (0%)

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + + +T N+L++ F +  +   A  L K        P V ++N LI G C      
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 451 EAYSFVKEMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           EA++ ++EM E  G  P + T++L+++GLC+S K+  A+         G T D+  Y  +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  L    K++DA+ L   +    C P + TYN L++GL K G  ++A+++   I++   
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            PD+++Y   + GL    R  +A++   +   RG++  T+ +  L+R ++  G
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 265/536 (49%), Gaps = 26/536 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  EKA  FL  + E G  P  ++Y +++    K+G++  A+ VF EM  +G E ++
Sbjct: 55  CKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI 114

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N+L+ G ++      A+E++ R +      P+VVTYN MI GLCK  + DE + + +
Sbjct: 115 VNFNVLLSGLWRARKIHEARELF-RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 173

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           RMK+ +      TY + I  LCK   ++ A  V+ +M E         Y+ + +   RAG
Sbjct: 174 RMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGL--LENGKVDEAISIWELLREKNCNADSTT 347
           K+ E   ++  M RK  C+   +Y++++ GL  ++ G V+ A  + E++ +K    D   
Sbjct: 234 KLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKK-IAPDFYA 292

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG------------EG-----RLADAASLVNRMD 390
           + +LINGLCK     +A ++  E+   G            EG     +L DA  L   M 
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   +  + N ++ GF        A  LF++M + G      +YN +I G  K E + 
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWS 412

Query: 451 EAYSFVKEML----EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            A+   K M     +K   P+M TY +LI+ LC++ +++ A KL      KGF P + ++
Sbjct: 413 SAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 472

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            +L+  L  AG+++DA +LY  M + NC   + + N L+DG+ + G  D+A +    + +
Sbjct: 473 EVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTD 532

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + PD  +Y+  + GLC   +   A + + + +  G  P       L+ A+   G
Sbjct: 533 TGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQG 588



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 237/485 (48%), Gaps = 25/485 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M E G+  N + YN LI    K G    A+   +R  M     PNVV+YN++I+G CK  
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKR--MPQHCAPNVVSYNIIIDGYCKAR 58

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             ++ L     M++         Y S +   CK GNV  A  V+ EM   G   D V +N
Sbjct: 59  NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++ G  RA KI E  EL+  M  +GC  +VV+YN +I GL +  K+DEA+ + E ++++
Sbjct: 119 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQE 178

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS-LVNRMDKHG----- 393
           + +    T+  LI+ LCK   L +A ++  ++ EG       A S L N++ + G     
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEA 238

Query: 394 -------CKLNA-YTCNSLMNGFIQASKLE----NAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  C+ N   T N+     +  SK++     A  L  EM  K  +P   +Y+ LIN
Sbjct: 239 SRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILIN 298

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLCK  R GEA    +EM  +G  P ++TY+ L+ GL  + K+  A++L    L +G  P
Sbjct: 299 GLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP 358

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   YN++I G C+ G   +A  L+ +M K   V N  TYN ++ G  K      A  ++
Sbjct: 359 DTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLF 418

Query: 562 NHILEER----LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             +   +      P++ +Y I +  LC   ++ +AF+ L+    +G +P+   W +L+  
Sbjct: 419 KRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 478

Query: 618 VMNNG 622
           +   G
Sbjct: 479 LARAG 483



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 251/568 (44%), Gaps = 73/568 (12%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S++Q++ K     KA+DVF  M    GCE  I         L R R+  +A+    S+  
Sbjct: 84  SIVQSFCKTGNVSKAMDVFAEMPAK-GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNS 142

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G KPDV +Y T+I GL K   L  A+ + + M +  V    V Y  LID   K     +
Sbjct: 143 RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQ 202

Query: 189 AKEIWER-------------------------LVMETSVYPNVV---------TYNVMIN 214
           A E++E+                         LV  + VY ++          TY++++ 
Sbjct: 203 AYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVL 262

Query: 215 GLCKC-GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           GL K  G   E  ++   M   +   D + Y   I+GLCKA     A+ +++EM   GI 
Sbjct: 263 GLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGIS 322

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
              VTYN +++G     K+++  EL   M  +G L +  SYN++IRG   NG  +EA  +
Sbjct: 323 PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCL 382

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA------------ 380
           ++ + +     ++ T+  +I G  K+   + A  +   ++ G   ++             
Sbjct: 383 FQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILIS 442

Query: 381 ---------DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                    +A  L++ M   G   +      L++   +A +L++A  L+KEMSR  C  
Sbjct: 443 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 502

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V S N L++G+ +     EA  F+K+M + G  PD  TY  L+ GLC   K D A KL 
Sbjct: 503 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 562

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + ++ G  P+      L+  LC+ G  + A + Y  +        L  +NTL+     T
Sbjct: 563 EELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV-----T 617

Query: 552 GDC-DKALEIWNHILEERLRPDIISYNI 578
             C  + L+  + I +    PD+I   I
Sbjct: 618 SCCLARKLDYLDMIEQREGVPDVIVERI 645


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 250/522 (47%), Gaps = 35/522 (6%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           QF K   F N +     K +   Y ++      + D++ A ++F  +  +      + +N
Sbjct: 22  QFLKNTHF-NFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFN 80

Query: 175 ILIDGFFKKGDYMRAKEIWERLVME---------------TSVYPNVVTYNVMINGLCKC 219
            ++    K   Y     + +++  E                  +PN +T+  +I GLC  
Sbjct: 81  KILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLK 140

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+  + L   D +     + D   Y + IHGLCK G    A  + R +  + +  + V Y
Sbjct: 141 GQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMY 200

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           + +IDG C+   + + F+L+  M  KG   NVV+Y+ LI G    G++ +AI ++  +  
Sbjct: 201 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 260

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +N   D  T  +L++G CK                  +G++ +  ++   M K G K N 
Sbjct: 261 ENIKPDVYTFNILVDGFCK------------------DGKMKEGKTVFAMMMKQGIKPNV 302

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  SLM+G+    ++  A  +   MS++G +P + SYN LI+G CK+++  EA +  KE
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M  K   PD++TY+ LI+GLC+  KI  ALKL  +   +G  PD+  Y+ ++  LC   +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           V+ A+ L + +K +   PN+ TY  L+DGL K G  + A  I+  +L +     + +Y +
Sbjct: 423 VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 482

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + G C+     +A   L+       +P  +T+ I++R++ +
Sbjct: 483 MIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFD 524



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 229/429 (53%), Gaps = 20/429 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+  ++ T+I GL   G +  AL   D +   G + + V Y  LI G  K G+   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++  R V    V PNVV Y+ +I+G+CK    ++  +++  M       +  TY + I 
Sbjct: 182 LDLLRR-VDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G    G ++ A  ++ +M+   I  D  T+N ++DGFC+ GK+KE   ++ +M ++G   
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+Y  L+ G     +V++A SI   + ++  N D  ++ +LI+G CK   +++A+ + 
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+                   KH    +  T NSL++G  +  K+  A+ L  EM  +G
Sbjct: 361 KEMHH-----------------KHIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P +++Y+++++ LCK  +  +A + + ++ ++G +P+M TY++LI+GLC+  +++ A 
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 462

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +    L KG+   V  Y ++IHG C+ G  ++AL L S MK  +C+P+ VTY  ++  L
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522

Query: 549 FKTGDCDKA 557
           F   + DKA
Sbjct: 523 FDKDENDKA 531



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 232/473 (49%), Gaps = 36/473 (7%)

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           + N + Y+ +   F    D + A  ++ RL+ +    P  + +N ++  L K   +   L
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPT-PPAIEFNKILGSLVKSKHYHTVL 96

Query: 227 EMWDRMK-----------KNERE-----KDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +  +M+           ++  +      ++ T+ + I GLC  G +  A   +  +V  
Sbjct: 97  SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM 156

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           G  +D V Y  +I G C+ G+ +   +L   V G     NVV Y+ +I G+ ++  V++A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
             ++  +  K  + +  T+  LI+G                      G+L DA  L N+M
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFT------------------VGQLKDAIDLFNKM 258

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
                K + YT N L++GF +  K++    +F  M ++G  P VV+Y +L++G C V+  
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A S +  M ++G  PD+ +Y++LI+G C+ KK+D A+ L  +   K   PDV  YN L
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GLC  GK+  AL+L   M  R   P+++TY++++D L K    DKA+ +   + ++ +
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           RP++ +Y I + GLC   R+ DA     D L +G   T  T+ +++    N G
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 218/417 (52%), Gaps = 20/417 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K Q  +A  F +++   G + D   YGT+I+GL K G+   AL +   +    V+ N
Sbjct: 137 LCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPN 196

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +IDG  K      A +++  +V    + PNVVTY+ +I+G    G+  + ++++
Sbjct: 197 VVMYSTIIDGMCKDKHVNDAFDLYSEMV-SKGISPNVVTYSALISGFFTVGQLKDAIDLF 255

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M     + D +T+   + G CK G ++  + V+  M++ GI  + VTY +++DG+C  
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 315

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   +   M ++G   ++ SYNILI G  +  KVDEA+++++ +  K+   D  T+
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTY 375

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK                   G+++ A  LV+ M   G   +  T +S+++  
Sbjct: 376 NSLIDGLCK------------------LGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +++ AI L  ++  +G  P + +Y  LI+GLCK  R  +A++  +++L KG+   +
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            TY+++I+G C     D AL L  +       PD   Y I+I  L    + + A +L
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 2/227 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++  KAK  L ++ ++G+ PD+ SY  +I+G  K   +  A+ +F EM  + +  +V
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN LIDG  K G    A ++ + +  +  V P+++TY+ +++ LCK  + D+ + +  
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQVDKAIALLT 431

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++K      + +TY   I GLCK G +E A  ++ +++  G  +   TY  MI GFC  G
Sbjct: 432 KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
              E   L   M    C+ + V+Y I+IR L +  + D+A  + E++
Sbjct: 492 LFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 35/122 (28%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q +KA   L  L ++G++P++Y+Y  +I+GL K G L  A  +F+++  +G    
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT 476

Query: 170 V-----------------------------------VCYNILIDGFFKKGDYMRAKEIWE 194
           V                                   V Y I+I   F K +  +A+++ E
Sbjct: 477 VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE 536

Query: 195 RL 196
            +
Sbjct: 537 MI 538


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 259/493 (52%), Gaps = 37/493 (7%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P + +   V++GLVK+     A  +FDEM  RG+  +VV YN LI+    +G   +A+E+
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           W+++V +  + PNVVTY  MI  LC+ G   +   ++D MK+   + + +TY   + G C
Sbjct: 209 WDQMVAQ-QIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHC 267

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS 312
           +  +V  A  +Y+E+++SG+  +AV +  +IDGFC+A +  E   ++  M R G    V 
Sbjct: 268 QRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVP 327

Query: 313 -YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN L+ G   +G   EA+++++ +       D  T  +++ GLC  G ++ A + L  V
Sbjct: 328 VYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGV 387

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           +E                   G  LNA   N+L++ + +   LE A+     M+  G  P
Sbjct: 388 QE------------------DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEP 429

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSY++LI+G  K  +   A +   EM+ KG +P+++TY+ LI+G  ++  ID A +L 
Sbjct: 430 NVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLH 489

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL---YSNMK-------------KRNC- 534
            + ++ G +P+    ++L+ GLC   +V++A++    YS +K             +  C 
Sbjct: 490 KEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECL 549

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           +PN V Y TL+ GL+  G   +A ++++++ +  + PD  +Y + ++G C    + +A  
Sbjct: 550 IPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMM 609

Query: 595 FLNDALCRGILPT 607
              D +  G+ PT
Sbjct: 610 LYADMMKIGVKPT 622



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 25/419 (5%)

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNV 257
            TS  P      V++  L + G  DE L ++ R+    R   +   C + + GL KA   
Sbjct: 113 STSTTP-APALGVLVIALSQMGLLDEALYVFRRL----RTLPALPACNAVLDGLVKARRP 167

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNIL 316
             A  ++ EM+  G+    VTYN +I+     G + +  E+W+ M  ++   NVV+Y  +
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTM 227

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I  L E G + +A  +++ ++E     +  T+ VL++G C+   +N A+ +  E      
Sbjct: 228 ICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQE------ 281

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       + K G   NA    +L++GF +A +   A  +F EM R G +PTV  Y
Sbjct: 282 ------------LLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVY 329

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N+L++G  +     EA +  +EM   G  PD  T S+++ GLC   ++ +A +      +
Sbjct: 330 NSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE 389

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G   +   YN LI   C  G +E+AL   + M +    PN+V+Y++L+DG  K G    
Sbjct: 390 DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQI 449

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           A+ I+  ++ + + P++++Y   + G      +  AF    + +  GI P  IT  +LV
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 39/417 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +     A+R  +++ E G++P+ Y+Y  +++G  +  D+  A+ ++ E+ + G+  N
Sbjct: 231 LCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPN 290

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +  LIDGF K   +  AK ++  +     V P V  YN +++G  + G   E L ++
Sbjct: 291 AVIFTTLIDGFCKAKRFSEAKGMFLEMP-RFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D FT    + GLC  G +  A+R  + + E G+ ++A  YNA+ID +CR 
Sbjct: 350 QEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E       M   G   NVVSY+ LI G  + GK+  A++I+  +  K    +  T+
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTY 469

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  KNG ++ A ++  E                  M ++G   NA T + L++G 
Sbjct: 470 TALIHGHAKNGGIDAAFRLHKE------------------MIENGISPNAITVSVLVDGL 511

Query: 409 IQASKLENAIFLFKEMSRKGCS-----------------PTVVSYNTLINGLCKVERFGE 451
            + ++++ A+    E S   CS                 P  V Y TLI GL    +  E
Sbjct: 512 CRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCE 571

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           A      M + G  PD  TY+LLI G C    +  A+ L    ++ G  P  T Y I
Sbjct: 572 AGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP--TRYKI 626



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 199/439 (45%), Gaps = 39/439 (8%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA+   + +  + + P+V +Y T+I  L + G +  A  +FD M E G++ N   YN+L+
Sbjct: 204 KAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLM 263

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G  ++ D   A  +++ L +++ + PN V +  +I+G CK  RF E   M+  M +   
Sbjct: 264 SGHCQRDDVNSAVVLYQEL-LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGV 322

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                 Y S + G  ++GN + A  +Y+EM   G+  D  T + ++ G C  G++     
Sbjct: 323 APTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADR 382

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
             + +   G  LN  +YN LI      G ++EA++    + E     +  ++  LI+G  
Sbjct: 383 FLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHS 442

Query: 357 KNGYLNKAIQILNE-VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           K G +  A+ I  E V +G E  +    +L++   K+G                    ++
Sbjct: 443 KRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG-------------------GID 483

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE----------------- 458
            A  L KEM   G SP  ++ + L++GLC+  R  EA  FV E                 
Sbjct: 484 AAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFT 543

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           + E+   P+ + Y  LI GL    +   A KL     + G  PD   Y +LI G C  G 
Sbjct: 544 IEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGY 603

Query: 519 VEDALQLYSNMKKRNCVPN 537
           V +A+ LY++M K    P 
Sbjct: 604 VLNAMMLYADMMKIGVKPT 622



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 19/344 (5%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           NA++DG  +A +    +EL++ M R+G + +VV+YN LI      G V +A  +W+ +  
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +  + +  T+  +I  LC+                  EG + DA  L + M + G + N 
Sbjct: 215 QQIDPNVVTYTTMICALCE------------------EGCIGDAERLFDAMKEAGMQPNQ 256

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           YT N LM+G  Q   + +A+ L++E+ + G +P  V + TLI+G CK +RF EA     E
Sbjct: 257 YTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLE 316

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  P +  Y+ L++G  +S     AL L  +  + G  PD    +I++ GLC  G+
Sbjct: 317 MPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQ 376

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +  A +    +++     N   YN L+D   + G+ ++AL     + E  + P+++SY+ 
Sbjct: 377 MHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSS 436

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + G     +M  A     + + +GI P  +T+  L+     NG
Sbjct: 437 LIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 30/296 (10%)

Query: 90  DKALDVFQRMNEI------FGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
            +AL ++Q M  +      F C   +  LC   Q   A RFL  + E G+  +  +Y  +
Sbjct: 343 QEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNAL 402

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+   + G+L  ALA    M E G+E NVV Y+ LIDG  K+G    A  I+  +V +  
Sbjct: 403 IDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAK-G 461

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PNVVTY  +I+G  K G  D    +   M +N    ++ T    + GLC+   V+ A 
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRG 319
           R   E   SG+               +   I   F  + +   + CL  N V Y  LI G
Sbjct: 522 RFVMEY--SGL---------------KCSDIHSVFSNFTI--EEECLIPNSVIYMTLIYG 562

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L  +G+  EA  ++  +R+     DS T+ +LI G C  GY+  A+ +  ++ + G
Sbjct: 563 LYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIG 618



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 3/128 (2%)

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L    T       +L+  L   G +++AL ++  ++    +P L   N ++DGL K    
Sbjct: 111 LSSTSTTPAPALGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRP 167

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             A E+++ +L   L P +++YN  +        ++ A E  +  + + I P  +T+  +
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTM 227

Query: 615 VRAVMNNG 622
           + A+   G
Sbjct: 228 ICALCEEG 235


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 283/570 (49%), Gaps = 28/570 (4%)

Query: 79  VIQAYGKNSMPDKALDVFQRM--NEIFG----CEAGI--LCRKRQFEKAKRFLNSLWEKG 130
           V++A  K  M D A+ +F  M  +EI      C   I  LC+ R   +A   L  + + G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             P  +++ +V++ LVK G +  AL + DE+   G + +VV    L+ G+  + +  +A 
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           +I+E   +   + P  VTY V+I G  + G  ++  E+  +M+ +     +  +   I G
Sbjct: 303 DIFEE-TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN- 309
           L      + A  +++EM +SGI  DA TYN +I   C+  KI+E   LWE M   G    
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V+Y+ L+     NG +DEA+ ++  +  K    +  T+  L+ G       +KA  +L 
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 370 EVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E+++ G                  GR+ +   ++ R +  G    A T NS++NGFI+A 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            + +A  ++++M  KG  P +V+Y + I+G CK      A   + ++  KG +PD+  Y+
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYN 600

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI G CQ   +  AL++    L+ G  P++++YN  I G  +   +E+AL+ Y  M K 
Sbjct: 601 SLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKE 660

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               +  TY TL+DG  K G+   AL++++ ++ +   PD I++     GLC    + DA
Sbjct: 661 GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDA 720

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + L++     I P  + +++L+   + NG
Sbjct: 721 RKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 242/547 (44%), Gaps = 55/547 (10%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG   D + +  V+    K G    A+ +FDEM    +E +    ++ I    K  D  R
Sbjct: 171 KGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANR 230

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +  ++  +    P   T+N +++ L K GR +E L + D +    ++       + +
Sbjct: 231 ALLVLRKM-QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HG C    V  A  ++ E +  G+    VTY  +I G    G  ++ +EL   M   G L
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 309 NVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
              + +N++I+GLL +    +A+S+++ + +     D+ T+ +LI+ LC+   + +A+ +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
             ++ E G                  G + +A  L   M   G   N  T  +LM G I 
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER---------------------- 448
            +  + A  L  EM + G S    +YNTLINGLC V R                      
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 449 -------------FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                         G A++  ++M  KG  P+++TY+  I+G C++   D+ALK+     
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG  PD+  YN LI+G C  G +  ALQ+   M K   +PN+  YN+ + G       +
Sbjct: 589 CKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +AL  +  +++E +  D  +Y   + G      ++ A +  ++ + +G +P  IT+  L 
Sbjct: 649 EALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALT 708

Query: 616 RAVMNNG 622
             +  NG
Sbjct: 709 HGLCRNG 715



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 246/513 (47%), Gaps = 18/513 (3%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           S+  +G+ PD  S   ++    +S     ALA+  EM  +G   +   +++++   FK+G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            Y  A  +++ +   + + P+    +V I  LCK    +  L +  +M+        FT+
Sbjct: 192 MYDDAVRLFDEMP-ASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S +  L K G +E A  +  E++ +G  +  V    ++ G+C   ++++  +++E   R
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 305 KGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G +   V+Y +LIRG  E G  ++A  +   +R+      +    ++I GL  +     
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 364 AIQILNEVEEGG----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           A+ +  E+ + G                  ++ +A +L  +M++ G K    T +SL+  
Sbjct: 371 AVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +     ++ A+ L+ EM  KG +P VV+Y TL+ G      F +AY+ + EM + G   +
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ LINGLC   ++    ++  +F  +GF P    YN +I+G   AG +  A  +Y 
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  +   PN+VTY + +DG  KT  CD AL++ N +  + LRPDI +YN  + G C   
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            MS A + L   L  G+LP    ++  +    N
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 87/409 (21%)

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGK 325
           EM   G  +DA                      W             +++++R   + G 
Sbjct: 167 EMRGKGHPLDA----------------------W------------MFDVVMRACFKEGM 192

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
            D+A+ +++ +       D     V I  LCK    N+A+ +L ++++ G          
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +A  + + +   G K++     +LM+G+    ++  A+ +F+E  R G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 429 CSPTVVSYNTLING------------LCKVER-----------------------FGEAY 453
             PT V+Y  LI G            LC+  R                       + +A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           S  KEM + G  PD  TY++LI+ LCQ +KI  AL L  +  + G  P +  Y+ L+   
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G +++A++LY+ M  +   PN+VTY TLM G       DKA  +   + +  +  + 
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +YN  + GLC   R+ +  E L      G +PT +T++ ++   +  G
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 86/199 (43%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G +P   S   L+    +     +A + + EM  KG   D   + +++    +   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            D A++L  +       PD  + ++ I  LC       AL +   M+    VP   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++D L K G  ++AL I + +L    +  ++     + G C    +  A +   + L  G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 604 ILPTTITWHILVRAVMNNG 622
           ++PT +T+ +L+R     G
Sbjct: 313 LVPTDVTYTVLIRGCTEEG 331


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 280/587 (47%), Gaps = 81/587 (13%)

Query: 111 CRKRQFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           C ++  E+A+  +  + + K L  D   +G VING  + G +  A  + +EM +  ++ N
Sbjct: 324 CNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVN 383

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YNI+I+G+ K G  + A  I   +     V P+  +YN +++G CK G  ++  E +
Sbjct: 384 LFVYNIMINGYCKLGRMVEAHNILHEMT-GVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +N     + TY + + G C  G+++ A R++  M++ GI  + ++ + ++DGF ++
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK ++   LW E + R    N  ++N +I GL +  ++ EA  + + +++  C  D  T+
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG--------------------------------- 375
             L +G CK G +++A +ILNE+E  G                                 
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN 622

Query: 376 -------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                              EG L  A +L   M + G   N + C+SL++ F +  K + 
Sbjct: 623 RGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDE 682

Query: 417 AIFLFKEMSRKGCSPTV--------------------------VSYNTLINGLCKVERFG 450
           A  + + +      P +                          + +N +I GLCK+ R  
Sbjct: 683 ANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIE 742

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A + + ++ +KG+  D  TYS LI+G   S  +D+A  L    L  G TP++  YN LI
Sbjct: 743 DAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLI 802

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC +G++  A+ L+  +  +   PN +TYNTL+D   K G   +A ++   ++EE + 
Sbjct: 803 YGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIH 862

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           P + +Y+I + GLC+   M +A + L+  +   + P  +T+  L++ 
Sbjct: 863 PTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 252/543 (46%), Gaps = 44/543 (8%)

Query: 47  RLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGC 105
           R   P L  H      L+E+ K +     +  ++ +A       D AL VF  M  + GC
Sbjct: 152 RPPAPPLFPH------LVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTL-GC 204

Query: 106 EAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
              +         L +             +   G  PD ++   +     K   ++ AL 
Sbjct: 205 RLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALE 264

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
             +EM + GVE N+V Y+ +++G+ + G    A+ + + L       PN+VTY +++ G 
Sbjct: 265 FVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR-GFSPNIVTYTLLVKGY 323

Query: 217 CKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           C     +E   +   ++KN++   D   + + I+G C+ G +E A R+  EMV+S + V+
Sbjct: 324 CNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVN 383

Query: 276 AVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
              YN MI+G+C+ G++ E    L E+ G     +  SYN L+ G  + G +++A   + 
Sbjct: 384 LFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYN 443

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +      A + T+  L+ G C  G ++                  DA  L   M K G 
Sbjct: 444 TMLRNGFAATTLTYNALLKGFCSLGSID------------------DALRLWFLMLKKGI 485

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N  +C++L++GF ++ K E A+ L+KE   +G +    ++NT+INGLCK+ER  EA  
Sbjct: 486 APNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEE 545

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V +M +    PD+ITY  L +G C+   +D A ++  +    GF P +  +N LI G  
Sbjct: 546 LVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHF 605

Query: 515 SA---GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            A   GKV D L     M  R   PN V Y  L+ G  K GD   A  ++  ++E+ L P
Sbjct: 606 IAKQHGKVNDIL---FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662

Query: 572 DII 574
           ++ 
Sbjct: 663 NLF 665



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 245/543 (45%), Gaps = 45/543 (8%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           A   C+ +    A  F+  + + G++ ++ +Y  V+NG  + G    A  + D +  RG 
Sbjct: 250 AKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGF 309

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N+V Y +L+ G+  + +   A+ + + +     +  +   +  +ING C+ GR ++  
Sbjct: 310 SPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAA 369

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + + M  +  + + F Y   I+G CK G +  A  +  EM   G+  D  +YN+++DG+
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGY 429

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G + + FE +  M R G     ++YN L++G    G +D+A+ +W L+ +K    + 
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            +   L++G  K+G   KA+ +  E    G  +                  N  T N+++
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAK------------------NTTTFNTVI 531

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           NG  +  ++  A  L  +M +  C P +++Y TL +G CK+     A   + E+   G+ 
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P +  ++ LI G   +K+      +  +   +G +P+   Y  LI G C  G +  A  L
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNL 651

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI------------ 573
           Y  M ++  VPNL   ++L+   ++ G  D+A  +  +++   + PDI            
Sbjct: 652 YLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVAN 711

Query: 574 --------------ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
                         I +NI + GLC   R+ DA   L D   +G +    T+  L+    
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCS 771

Query: 620 NNG 622
            +G
Sbjct: 772 ASG 774



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 227/489 (46%), Gaps = 45/489 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K    KA    N++   G      +Y  ++ G    G +  AL ++  M ++G+  N 
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  + L+DGFFK G   +A  +W+   +   +  N  T+N +INGLCK  R  E  E+ D
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKE-TLARGLAKNTTTFNTVINGLCKIERMPEAEELVD 548

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE------------------------ 266
           +MK+     D  TY +   G CK G+++ A R+  E                        
Sbjct: 549 KMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAK 608

Query: 267 -----------MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
                      M   G+  + V Y A+I G+C+ G +   + L+  M  KG + N+   +
Sbjct: 609 QHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICS 668

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK------NGYLNKAIQIL 368
            L+      GK DEA  + + L   +   D +   + I  +         G  + A  + 
Sbjct: 669 SLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMW 728

Query: 369 NEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           N V  G    GR+ DA +L+  +   G   + +T +SL++G   +  ++ A  L   M  
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G +P +V+YN+LI GLCK      A S  K++  KG  P+ ITY+ LI+  C+   I  
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A KL  + +++G  P V  Y+ILI+GLC+ G +E+A++L   M + N  PN VTY TL+ 
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 547 GLFKTGDCD 555
           G  +    D
Sbjct: 909 GYVRCESVD 917



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 230/498 (46%), Gaps = 55/498 (11%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           S+  ++  L  +G L GAL VFDEM   G                             RL
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGC----------------------------RL 206

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M +         N ++N L + G     + ++++M++     D FT        CK   
Sbjct: 207 SMRSC--------NSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKG 258

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNI 315
           V  A     EM + G+ V+ V Y+A+++G+C  G+  +   + + + GR    N+V+Y +
Sbjct: 259 VVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTL 318

Query: 316 LIRGLLENGKVDEAISIWELLRE-KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           L++G      ++EA  + + +R+ K    D    G +ING C+ G +  A ++LNE+ + 
Sbjct: 319 LVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDS 378

Query: 375 -----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                              GR+ +A ++++ M   G + + Y+ NSL++G+ +   +  A
Sbjct: 379 RLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
              +  M R G + T ++YN L+ G C +    +A      ML+KG  P+ I+ S L++G
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
             +S K + AL L  + L +G   + T +N +I+GLC   ++ +A +L   MK+  C P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++TY TL  G  K GD D+A  I N +      P I  +N  + G     +     + L 
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 598 DALCRGILPTTITWHILV 615
           +   RG+ P T+ +  L+
Sbjct: 619 EMSNRGLSPNTVAYGALI 636



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 201/411 (48%), Gaps = 18/411 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +  ++++++  L   G+ D  L+++D M+         +  S ++ L + G++     V+
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
            +M  +G   D  T   M   +C+   +    E  E M + G  +N+V+Y+ ++ G  E 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G+ ++A  + + L  +  + +  T+ +L+ G C    + +A  ++ E+ +  +  + +A 
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA- 350

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                              +++NG+ Q  ++E+A  L  EM        +  YN +ING 
Sbjct: 351 ----------------VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGY 394

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+ R  EA++ + EM   G +PD  +Y+ L++G C+   ++ A +     L+ GF    
Sbjct: 395 CKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATT 454

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN L+ G CS G ++DAL+L+  M K+   PN ++ +TL+DG FK+G  +KAL +W  
Sbjct: 455 LTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKE 514

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            L   L  +  ++N  + GLC   RM +A E ++        P  IT+  L
Sbjct: 515 TLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 211/498 (42%), Gaps = 88/498 (17%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S++  Y K  + +KA + +  M           +       C     + A R    + +K
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P+  S  T+++G  KSG    AL ++ E   RG+  N   +N +I+G  K      A
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM----------------- 232
           +E+ +++  +    P+++TY  + +G CK G  D    + + +                 
Sbjct: 544 EELVDKM-KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLIT 602

Query: 233 -----KKNEREKD-------------SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
                K++ +  D             +  Y + I G CK G++  A  +Y EM+E G+  
Sbjct: 603 GHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662

Query: 275 DAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNV----------------------- 310
           +    ++++  F R GK  E    L  ++G     ++                       
Sbjct: 663 NLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHH 722

Query: 311 ---VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
              + +NI+I GL + G++++A ++   L++K   AD+ T+  LI+G   +G+++ A  +
Sbjct: 723 SAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDL 782

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            + +   G                  G L+ A SL  ++   G   NA T N+L++   +
Sbjct: 783 RDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCK 842

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              +  A  L + M  +G  PTV +Y+ LINGLC      EA   + +M+E    P+ +T
Sbjct: 843 DGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVT 902

Query: 471 YSLLINGLCQSKKIDMAL 488
           Y  LI G  + + +D+ +
Sbjct: 903 YWTLIQGYVRCESVDVPI 920



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 72/166 (43%)

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           K  S +  S++ L+  L    +   A     EM   G +  M + + ++N L Q+  +  
Sbjct: 167 KEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGA 226

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            + +  Q  + G  PD     I+    C    V  AL+    M K     NLV Y+ +M+
Sbjct: 227 TVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMN 286

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           G  + G  + A  + + +      P+I++Y + +KG C+   M +A
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           K F+     +++L+  L +AG+++ ALQ++  M+   C  ++ + N++++ L +TGD   
Sbjct: 167 KEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGA 226

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            + ++  +      PD  +  I  K  C    +  A EF+ +    G+    + +H    
Sbjct: 227 TVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYH---- 282

Query: 617 AVMN 620
           AVMN
Sbjct: 283 AVMN 286


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 250/494 (50%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P+VY+   +IN       +  A +V  ++ + G + +   +  LI G   +G    A
Sbjct: 86  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++++++ E    PNVVTY  +INGLCK G     + +   M++   + D   Y S I 
Sbjct: 146 LHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LCK   V  A  ++ +MV  GI  D  TY +++   C   + K    L   M     L 
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV ++ ++  L + GKV EA  I +++ ++    D  T+  L++G C    +++A+++ 
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +                   M + G   +  +  +L+NG+ +  K++ A++LF+EM RK 
Sbjct: 325 D------------------MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   +YNTL++GLC V R  +A +   EM+ +G  PD++TYS+L++ LC++  ++ A+
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAM 426

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L          PD+ +YNI+I G+C AG++E A  L+SN+  +   P++ TYN ++ GL
Sbjct: 427 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  ++A +++  +      PD  +YN   +G    +    A + L + L RG     
Sbjct: 487 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADV 546

Query: 609 ITWHILVRAVMNNG 622
            T  +LV  + ++G
Sbjct: 547 STTTLLVEMLSDDG 560



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 242/475 (50%), Gaps = 20/475 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +   A   L  + + G +PD  ++ T+I GL   G +  AL +FD+M + G + N
Sbjct: 101 FCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPN 160

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +  R + + +  P+VV Y  +I+ LCK  +  E   ++
Sbjct: 161 VVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M       D FTY S +H LC     +    +  +MV S I  D V ++ ++D  C+ 
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  E+ ++M ++G   +VV+Y  L+ G     ++DEA+ +++++  K    D  ++
Sbjct: 280 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 339

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   ++KA+ +  E                  M +     +  T N+LM+G 
Sbjct: 340 TTLINGYCKIHKIDKAMYLFEE------------------MCRKEWIPDTKTYNTLMHGL 381

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM  +G  P +V+Y+ L++ LCK     EA + +K +      PD+
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+++I+G+C++ +++ A  L      KG  P V  YNI+IHGLC  G + +A +L+  
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           M   +C P+  TYNT+  G  +  +  +A+++   +L      D+ +  + ++ L
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 245/507 (48%), Gaps = 20/507 (3%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A    N L      P +  +  ++  + K       L++  +M   GV  NV   NI
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+ F        A  +  + +++    P+  T+  +I GLC  G+  E L ++D+M   
Sbjct: 97  LINSFCHLNRVGFAFSVLAK-ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +  TY + I+GLCK GN   A R+ R M +     D V Y ++ID  C+  ++ E 
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F L+  M  +G   ++ +Y  L+  L    +     ++   +       D      +++ 
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK                  EG++ +A  +V+ M + G + +  T  +LM+G    S++
Sbjct: 276 LCK------------------EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ +F  M RKG +P V+SY TLING CK+ +  +A    +EM  K W PD  TY+ L
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++GLC   ++  A+ L  + + +G  PD+  Y+IL+  LC    +E+A+ L   ++  N 
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P++  YN ++DG+ + G+ + A ++++++  + L P + +YNI + GLC    +++A +
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 595 FLNDALCRGILPTTITWHILVRAVMNN 621
              +       P   T++ + R  + N
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQN 524



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 215/456 (47%), Gaps = 43/456 (9%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS------------- 58
           L  + +P T   L      E     + HLF  ++     P +V + +             
Sbjct: 120 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 179

Query: 59  --RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI- 109
             R+L  +E   C     +  S+I +  K+    +A ++F +M       +IF   + + 
Sbjct: 180 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 239

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC   +++     LN +    + PDV  + TV++ L K G +  A  + D M +RGVE 
Sbjct: 240 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV Y  L+DG   + +   A ++++ +V +    P+V++Y  +ING CK  + D+ + +
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK-GFAPDVISYTTLINGYCKIHKIDKAMYL 358

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++ M + E   D+ TY + +HGLC  G ++ A  ++ EMV  G   D VTY+ ++D  C+
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 418

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
              ++E   L + +       ++  YNI+I G+   G+++ A  ++  L  K  +    T
Sbjct: 419 NCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 478

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + ++I+GLCK G LN+A ++  E                  MD + C  +  T N++  G
Sbjct: 479 YNIMIHGLCKRGLLNEANKLFME------------------MDGNDCSPDGCTYNTIARG 520

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           F+Q ++   AI L +EM  +G S  V +   L+  L
Sbjct: 521 FLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NR+       +      L+    +       + L  +M   G  P V + N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R G A+S + ++L+ G +PD  T++ LI GLC   KI  AL L  + + +G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + PDI +Y   +  LC+          LN  +   ILP  + +  +V A+
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 619 MNNGAST 625
              G  T
Sbjct: 277 CKEGKVT 283



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+  +  +  + L++A+  F  +      P++V +  L+  + K++ +    S   +M  
Sbjct: 25  NNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 84

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P++ T ++LIN  C   ++  A  +  + L+ G  PD T +  LI GLC  GK+ +
Sbjct: 85  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      PN+VTY TL++GL K G+   A+ +   + +   +PD++ Y   + 
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            LC   ++++AF   +  + +GI P   T+  LV A+ N
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 243



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 139/307 (45%), Gaps = 13/307 (4%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
            + D+  +E     +  +   +++R ++P +V + +       +   +C +      ++ 
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT-------LMDGHCLQSEMDEAVKV 323

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           +        A DV      I G      C+  + +KA      +  K   PD  +Y T++
Sbjct: 324 FDMMVRKGFAPDVISYTTLING-----YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL   G L  A+A+F EM  RG   ++V Y+IL+D   K      A  +  + +  +++
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL-KAIEASNL 437

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P++  YN++I+G+C+ G  +   +++  +         +TY   IHGLCK G +  A +
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLE 322
           ++ EM  +    D  TYN +  GF +  +     +L E M  +G    VS   L+  +L 
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557

Query: 323 NGKVDEA 329
           +  +D++
Sbjct: 558 DDGLDQS 564


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 263/512 (51%), Gaps = 20/512 (3%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+  +       L ++G    + +   ++  +VK G +  A  V+++  + G   NV 
Sbjct: 166 QARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVY 225

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+++   K G  +    ++   + E  VY ++VTYN ++N  C+ G   E   + D 
Sbjct: 226 TLNIMVNALCKDGK-LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDC 284

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M     +   FTY + I+GLCK G+ E A+RV  EM+  G+  +A T+N M+   CR   
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E   ++  M ++G + +++S++ ++     NG++  A++ +E ++      D+  + +
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LING C+N  ++ A+++ NE+ E                   GC ++  T N+L+NG  +
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVE------------------RGCVMDVVTYNTLLNGLCR 446

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              L++A  LFKEM  +G  P   +  TLI+G CK     +A S  + M  +  KPD++T
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L++G C+  +++ A +L    + +   P    ++ILI+G CS G V +A +L+  MK
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           ++   P LVT NT++ G  + G+  KA +  N ++ E + PD I+YN  +          
Sbjct: 567 EKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFD 626

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            AF  +N+   RG+LP  +T++ ++     +G
Sbjct: 627 RAFFLINNMEERGLLPNLVTYNAILGGFSRHG 658



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 245/491 (49%), Gaps = 19/491 (3%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           +VY+   ++N L K G L        EM E+GV  ++V YN L++ + ++G    A  + 
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLV 282

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +  +  + P + TYN +INGLCK G ++    + D M       ++ T+   +   C+
Sbjct: 283 DCMAGK-GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCR 341

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
             +V  AERV+ EM++ G+  D +++++++  F R G++      +E M   G + + V 
Sbjct: 342 KEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI 401

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ILI G   N  V  A+ +   + E+ C  D  T+  L+NGLC+   L+ A ++  E+ 
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 461

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           E G                 +G +  A SL   M     K +  T N+LM+GF +  ++E
Sbjct: 462 ERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 521

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  L+ +M  +   P+ +S++ LING C +    EA+    EM EKG KP ++T + +I
Sbjct: 522 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G  ++  +  A       + +G  PD   YN LI+        + A  L +NM++R  +
Sbjct: 582 KGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLL 641

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PNLVTYN ++ G  + G   +A  + + ++++ + PD  +Y   + G  S   M +AF  
Sbjct: 642 PNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRV 701

Query: 596 LNDALCRGILP 606
            ++ L RG +P
Sbjct: 702 HDEMLQRGFVP 712



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 226/429 (52%), Gaps = 20/429 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++  +E+AKR L+ +   GL P+  ++  ++    +  D+  A  VF+EM +RGV  +
Sbjct: 304 LCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPD 363

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ ++ ++  F + G+  RA   +E++     + P+ V Y ++ING C+       L+M 
Sbjct: 364 LISFSSIVGVFSRNGELGRALAYFEKM-KGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     D  TY + ++GLC+   ++ A+ +++EMVE G+F D  T   +I G+C+ 
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +   L+E M  +    +VV+YN L+ G  + G++++A  +W  +  +       + 
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LING C  G +++A ++ +E++E                   G K    TCN+++ G+
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKE------------------KGIKPTLVTCNTIIKGY 584

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A  L  A      M  +G  P  ++YNTLIN   K E F  A+  +  M E+G  P++
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNL 644

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ ++ G  +  ++  A  +  + + KG  PD + Y  LI+G  S   +++A +++  
Sbjct: 645 VTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE 704

Query: 529 MKKRNCVPN 537
           M +R  VP+
Sbjct: 705 MLQRGFVPD 713



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 218/435 (50%), Gaps = 18/435 (4%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VV ++++I    +  +  E  E +  ++K           + +  + K G V+ A +VY 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
           + V+SG  V+  T N M++  C+ GK+         M  KG   ++V+YN L+      G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-------------- 370
            V EA  + + +  K       T+  LINGLCK G   +A ++L+E              
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 371 ---VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
              VE   +  + +A  + N M + G   +  + +S++  F +  +L  A+  F++M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  V Y  LING C+ +    A     EM+E+G   D++TY+ L+NGLC+ K +D A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  + +++G  PD      LIHG C  G +  AL L+  M  R+  P++VTYNTLMDG
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K G+ +KA E+W  ++   + P  IS++I + G CS   +S+AF   ++   +GI PT
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573

Query: 608 TITWHILVRAVMNNG 622
            +T + +++  +  G
Sbjct: 574 LVTCNTIIKGYLRAG 588



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 228/463 (49%), Gaps = 20/463 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+    +A   ++ +  KGLKP +++Y  +INGL K G    A  V DEM   G+  N 
Sbjct: 270 CRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNA 329

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N ++    +K D   A+ ++  + ++  V P++++++ ++    + G     L  ++
Sbjct: 330 ATFNPMLVESCRKEDVWEAERVFNEM-LQRGVVPDLISFSSIVGVFSRNGELGRALAYFE 388

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +MK      D+  Y   I+G C+  +V GA ++  EMVE G  +D VTYN +++G CR  
Sbjct: 389 KMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK 448

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + +  EL++ M  +G   +  +   LI G  ++G + +A+S++E +  ++   D  T+ 
Sbjct: 449 MLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYN 508

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L++G CK G + KA ++  +                  M       +  + + L+NGF 
Sbjct: 509 TLMDGFCKVGEMEKAKELWYD------------------MISREIFPSYISFSILINGFC 550

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               +  A  L+ EM  KG  PT+V+ NT+I G  +     +A  F+  M+ +G  PD I
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LIN   + +  D A  L     ++G  P++  YN ++ G    G++++A  +   M
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
             +   P+  TY +L++G     +  +A  + + +L+    PD
Sbjct: 671 IDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/616 (26%), Positives = 286/616 (46%), Gaps = 88/616 (14%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY----CPE 73
           PHT  +L     + P    S     + L  L    L+ + S  L+   +++      C  
Sbjct: 36  PHTHHSLPPQIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCEN 95

Query: 74  DVALS-----VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
            V +      + +AYGK  +P KALD+F RM   F C                       
Sbjct: 96  RVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHC----------------------- 132

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
              K  V S+ TV+N +++ G    AL  ++ + +    +N+                  
Sbjct: 133 ---KQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI------------------ 171

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
                          PN +++N++I  LC+ G  D+ +E++  M       D +TY + +
Sbjct: 172 --------------QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLM 217

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLC  G ++ A  +  EM   G F + V +N +I   C+ G +    +L + M  KGC+
Sbjct: 218 HGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCV 277

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V+YN L+ GL   GK+D+A+S+   +    C  +  T G L++G  K+G     +++
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L  +EE G                   + N ++ +SL++G  +  K E+ + L+KEM  K
Sbjct: 338 LVSLEEKGY------------------RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEK 379

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           GC P  + Y+ LI+GLC+  +  EA  ++ EM  KG  P+  TYS L+ G  ++  I  A
Sbjct: 380 GCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKA 439

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           + +  +            Y+ILI+GLC  GK+++AL ++  M  R    ++V Y++++ G
Sbjct: 440 ILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHG 499

Query: 548 LFKTGDCDKALEIWNHIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
                  ++ ++++N +L    +L+PD+++YNI L   C+ + +S A + LN  L +G  
Sbjct: 500 FCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCD 559

Query: 606 PTTITWHILVRAVMNN 621
           P  IT  I ++ + +N
Sbjct: 560 PDFITCDIFLKTLRDN 575



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 49/320 (15%)

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           E +C     +   ++N + + G  + A++  N V         D+ S  N       + N
Sbjct: 129 EFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHV--------IDSNSFSN------IQPN 174

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             + N ++    +   ++ A+ +F+ MS + C     +Y+TL++GLC   R  EA S + 
Sbjct: 175 GLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLD 234

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM  +G  P+ + +++LI+ LC+   +  A KL      KG  P+   YN L+HGLC  G
Sbjct: 235 EMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 294

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMD------------------------------- 546
           K++ A+ L + M    CVPN +T+ TL+D                               
Sbjct: 295 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 354

Query: 547 ----GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
               GLFK G  +  +++W  ++E+  +P+ I Y+  + GLC   +  +A E+L +   +
Sbjct: 355 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 414

Query: 603 GILPTTITWHILVRAVMNNG 622
           G  P + T+  L+      G
Sbjct: 415 GHTPNSFTYSSLMWGYFEAG 434


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 249/493 (50%), Gaps = 22/493 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P   S   +I   V +     A  V   + +RG   NV  +N+L+ GF + GD  +A ++
Sbjct: 92  PCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL 151

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  ++    + P+ V+YN +INGLCK  R  E  E++  MK  E + +S T+ + I G C
Sbjct: 152 F-CMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFC 210

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G+VE    +  EM + G+  D   Y+A+I GFC  G I+   EL+  M RK    NVV
Sbjct: 211 KNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ L+  L +  K  EA  + + +       D   + VL +GL KN             
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN------------- 317

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR +DA  +++ M K G + N  T N+++NG  +  ++++A+ + + M++KG  P
Sbjct: 318 -----GRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP 372

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKIDMALK 489
            VV+Y+TL+ GLC V +  EA   +  ++ K +  KPD+  ++L+I  LC+ +++  A +
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKR 432

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +    +++GF  ++  YNILI G  SAGK+  AL+L+ +       PN  TY  L++GL 
Sbjct: 433 VYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K      A  ++N       RP +  YN  +  LC  S +  A     +       P  +
Sbjct: 493 KMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVV 552

Query: 610 TWHILVRAVMNNG 622
           +++I++   +  G
Sbjct: 553 SFNIIIDGTLKAG 565



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 296/606 (48%), Gaps = 31/606 (5%)

Query: 32  PGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDK 91
           P  + S   FHH L+    P  +   S    LI+  +     D  +SV       S+   
Sbjct: 36  PALSESLSHFHHTLQDY--PNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSV--- 90

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
               F  ++ +   E+ +  +K  F  A   L  + ++G   +VY++  ++ G  +SGD 
Sbjct: 91  -FPCFTSLSALI--ESFVNTQKPSF--AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDS 145

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A+ +F  M    +  + V YN +I+G  K    + AKE+++ +       PN VT++ 
Sbjct: 146 HKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSA 204

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I+G CK G  +E   + + M+K   E D F Y + I G C  G++E  + ++ EM+   
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAI 330
           +  + VTY+ +++  C+  K KE  ++ + M G K   +VV+Y +L  GL +NG+  +AI
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-------------- 376
            + +L+ ++    ++ T+  +INGLCK G ++ A+ IL  + + G+              
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384

Query: 377 ---GRLADAASLVNRM--DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
              G++ +A  L+N +   +   K + +  N ++    +  +L +A  ++  M  +G   
Sbjct: 385 CGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPS 444

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V+YN LI+G     +  +A    K+ ++ G  P+  TY++LINGLC+ + + +A  L 
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G  P V+ YN L+  LC    VE A  L+  M+  N  P++V++N ++DG  K 
Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           GD + A E+   +L   L PD I+++I +       ++ +A       +  G +P  + +
Sbjct: 565 GDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLF 624

Query: 612 HILVRA 617
             L++ 
Sbjct: 625 DSLLKG 630



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 250/507 (49%), Gaps = 21/507 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++  +AK     +     KP+  ++  +I+G  K+GD+     + +EM + G+E +
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y+ LI GF  KGD  R KE++  + +  +V PNVVTY+ ++N LCK  ++ E  +M 
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEM-LRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M   +   D   Y     GL K G    A +V   MV+ G   + VTYNA+I+G C+ 
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELL--REKNCNADST 346
           G++ +   + E M +KG   +VV+Y+ L++GL   GK+DEA+ +  LL  +E +   D  
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
              ++I  LCK   L  A ++   + E G                  G+L  A  L    
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G   NA T   L+NG  +   L  A  LF +    G  PTV  YNTL+  LC+    
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A +  +EM      PD+++++++I+G  ++  ++ A +L  + L     PD   ++IL
Sbjct: 533 EQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSIL 592

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I+     G++++A  LY  M     VP+ V +++L+ G    G  +K + +   + ++ +
Sbjct: 593 INRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFL 596
             D    +  L  LC+ S+  D  + L
Sbjct: 653 VLDSKLTSTILACLCNMSKDVDIEKIL 679



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 224/431 (51%), Gaps = 27/431 (6%)

Query: 203 YPNVV----TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           YPN +    + N +I+ L K   +D  + +  +M          +  + I          
Sbjct: 52  YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPS 111

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
            A  V   +++ G  ++   +N ++ GFC++G   +  +L+ +M R  CL  + VSYN +
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR-NCLIPDCVSYNTV 170

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I GL +  ++ EA  +++ ++   C  +S T   LI+G CKNG          +VEEG  
Sbjct: 171 INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNG----------DVEEG-- 218

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                   L+  M+K G + + +  ++L++GF     +E    LF EM RK  +P VV+Y
Sbjct: 219 ------FGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTY 272

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + L+N LCK +++ EA   +  M     +PD++ Y++L +GL ++ +   A+K+    ++
Sbjct: 273 SCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK 332

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  P+   YN +I+GLC  G+V+DAL +   M K+   P++VTY+TL+ GL   G  D+
Sbjct: 333 RGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDE 392

Query: 557 ALEIWNHIL--EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           A+++ N ++  E  ++PD+ ++N+ ++ LC   R+  A       + RG     +T++IL
Sbjct: 393 AVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNIL 452

Query: 615 VRAVMNNGAST 625
           +   ++ G  T
Sbjct: 453 IDGYLSAGKLT 463



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 208/435 (47%), Gaps = 55/435 (12%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C    LC+K+++++A + L+++    ++PDV +Y  + +GL K+G    A+ V D M 
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           +RG E N V YN +I+G  K+G    A  I E +  +    P+VVTY+ ++ GLC  G+ 
Sbjct: 332 KRGEEPNNVTYNAIINGLCKEGRVDDALGILETMA-KKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 223 DECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           DE +++ + +   E   + D F +   I  LCK   +  A+RVY  MVE G   + VTYN
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            +IDG+  AGK+ +  ELW+                         VD  IS         
Sbjct: 451 ILIDGYLSAGKLTKALELWK-----------------------DAVDSGIS--------- 478

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              ++ T+ VLINGLCK       +Q+           L+ A  L N+    G +     
Sbjct: 479 --PNAATYTVLINGLCK-------MQM-----------LSIAKGLFNKKRASGTRPTVSE 518

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+LM    + S +E A  LF+EM      P VVS+N +I+G  K      A   + EML
Sbjct: 519 YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEML 578

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                PD IT+S+LIN   +  ++D A  L  + +  G  PD  +++ L+ G    GK E
Sbjct: 579 NMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTE 638

Query: 521 DALQLYSNMKKRNCV 535
             + +   M  ++ V
Sbjct: 639 KVVSMLQQMADKDVV 653


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 253/501 (50%), Gaps = 19/501 (3%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V  +  +I+G  K  D+  ALAV + M  +G+  +VV YN L+ GFF  GD   A E+ E
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R+  +  V P+VVT+  +I   CK  R +E   +++ M ++    D  T  + + GLC+ 
Sbjct: 249 RMKAD-GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRD 307

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSY 313
           G    A  ++REM + G+  + VTY   ID   +  ++ E   L  E++ R   +++V Y
Sbjct: 308 GRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMY 367

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             ++  L + GK++EA  +       N   +  T+ VL++  C+ G ++ A Q+L ++EE
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                               G +A AA  + +M   G   N  T  +L++GF +    E 
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ ++++M  +G        ++L+NGL K     EA +  K+M E+G   D + Y+ L++
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++  +  ALK+  + +++  +PD  +YN+ I+ LC  GK  +A      M+     P
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  TYNT++    + G+  KAL++ N +    ++P++I+Y   + GL     +  A   L
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 597 NDALCRGILPTTITWHILVRA 617
           N+    G  PT +T+  +++A
Sbjct: 668 NEMASAGFTPTPLTYRRVLQA 688



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 273/594 (45%), Gaps = 89/594 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F +A      + + G+ P+  +Y T I+ L K   +  +L +  EM  RGV  +
Sbjct: 304 LCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMD 363

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  ++D   K+G    AK++  R  +  ++ PN VTY V+++  C+ G  D   +M 
Sbjct: 364 LVMYTTVMDRLGKEGKIEEAKDVL-RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF--C 287
            +M++     +  T+ S ++GL K G +  A    R+M +SGI  + VTY  +IDGF  C
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 288 RA---------------------------------GKIKECFELWEVMGRKGCL-NVVSY 313
           +                                  G I+E   L++ MG +G L + V+Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L+ GL + G +  A+ + + L E+N + D+  + V IN LC+ G  ++A   L E+  
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 EG  + A  L+N M     K N  T  +L+ G ++A  +E 
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK 662

Query: 417 AIFLFKEMSRKGCSPT-----------------------------------VVSYNTLIN 441
           A +L  EM+  G +PT                                   +  YNTL++
Sbjct: 663 AKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH 722

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC      +A   + EML +G  PD IT++ LI G C+S  +D A     Q L +G +P
Sbjct: 723 VLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSP 782

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  +N L+ GL SAG++ +A  +   MKK    PN +TY+ L+ G  K  +  +AL ++
Sbjct: 783 NIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLY 842

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             ++ +   P   +YN  +        M+ A E  ++   RG+L T+ T+ IL+
Sbjct: 843 CEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 896



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 285/601 (47%), Gaps = 44/601 (7%)

Query: 43  HILRRLI----DPKLVVHVSRI-------LELIEIQKCYCPEDV---ALSVIQAYGKNSM 88
            +LRRLI       LV   SR        L L  I   YC       ALS++++      
Sbjct: 52  RLLRRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRS-SSGPQ 110

Query: 89  PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           P  A D       + G     L  +     A   L+ + ++G+  D  +  T + GL ++
Sbjct: 111 PQVAADTVSYNIFLAG-----LSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRT 165

Query: 149 GDLLGALAVFDEMFERGVETN---VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           G L+G  A   EM  RG   +   VV +N LIDG+ K  D   A  + ER+  +  +  +
Sbjct: 166 G-LVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQ-GLSLD 223

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VV YN ++ G    G  D   E+ +RMK +  E    T+ + I   CK   +E A  +Y 
Sbjct: 224 VVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE 283

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
            MV SG+  D VT +A++DG CR G+  E + L+  M + G   N V+Y   I  L +  
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQ 343

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           +V+E++ +   +  +    D   +  +++ L K G + +A  +L          L+D   
Sbjct: 344 RVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHA-------LSD--- 393

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                       N  T   L++   +A  ++ A  +  +M  K  SP VV++++++NGL 
Sbjct: 394 --------NITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K     +A  ++++M + G  P+++TY  LI+G  + +  + AL +    L +G   +  
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           + + L++GL   G +E+A  L+ +M +R  + + V Y TLMDGLFKTG+   AL++   +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +E  L PD + YN+ +  LC   + S+A  FL +    G+ P   T++ ++ A    G +
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625

Query: 625 T 625
           +
Sbjct: 626 S 626



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 248/558 (44%), Gaps = 54/558 (9%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ +    A   +  +  +GL  DV  Y T++ G   SGD   A  V + M   GVE +V
Sbjct: 200 CKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSV 259

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +  LI  + K      A  ++E +V  + V P+VVT + +++GLC+ GRF E   ++ 
Sbjct: 260 VTHTTLIGEYCKMKRIEEAFTLYEGMV-RSGVLPDVVTLSALVDGLCRDGRFSEAYALFR 318

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M K     +  TYC+FI  L K   V  +  +  EMV  G+ +D V Y  ++D   + G
Sbjct: 319 EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEG 378

Query: 291 KIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           KI+E  + L   +      N V+Y +L+      G +D A  +   + EK+ + +  T  
Sbjct: 379 KIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFS 438

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            ++NGL K G + KA   + ++++ G        G L D          A  +   M   
Sbjct: 439 SILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHE 498

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC----------------------- 429
           G + N +  +SL+NG  +   +E A  LFK+M  +G                        
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAA 558

Query: 430 ------------SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                       SP  V YN  IN LC++ +F EA SF+KEM   G +PD  TY+ +I+ 
Sbjct: 559 LKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISA 618

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+      ALKL  +       P++  Y  L+ GL  AG VE A  L + M      P 
Sbjct: 619 QCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPT 678

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            +TY  ++     +      LE+   ++   L  DI  YN  +  LC       A   L+
Sbjct: 679 PLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLD 738

Query: 598 DALCRGILPTTITWHILV 615
           + L RGI P TIT++ L+
Sbjct: 739 EMLGRGIAPDTITFNALI 756



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 268/607 (44%), Gaps = 77/607 (12%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC---------Y 70
           T  AL D   R+  ++ +  LF  + +  + P  V + + I  L ++Q+           
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 71  CPEDVAL------SVIQAYGKNSMPDKALDVFQRM---NEIFGCEAGIL-----CRKRQF 116
               VA+      +V+   GK    ++A DV +     N    C    +     CR    
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A++ L  + EK + P+V ++ +++NGLVK G +  A     +M + G+  NVV Y  L
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTL 475

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           IDGFFK      A +++  ++ E  V  N    + ++NGL K G  +E   ++  M +  
Sbjct: 476 IDGFFKCQGQEAALDVYRDMLHE-GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y + + GL K GN+  A +V +E++E  +  DAV YN  I+  CR GK  E  
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
              + M   G   +  +YN +I      G   +A+ +   ++  +   +  T+  L+ GL
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654

Query: 356 CKNGYLNKAIQILNEVEEGG---------------------------------------- 375
            + G + KA  +LNE+   G                                        
Sbjct: 655 LEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADI 714

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G    A  +++ M   G   +  T N+L+ G  ++S L+NA   + +
Sbjct: 715 TVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQ 774

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G SP + ++NTL+ GL    R GEA + + EM + G +P+ +TY +L+ G  +   
Sbjct: 775 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSN 834

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              AL+L C+ + KGF P  + YN LI     AG +  A +L+S MK+R  +    TY+ 
Sbjct: 835 KVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 894

Query: 544 LMDGLFK 550
           L++G  K
Sbjct: 895 LLNGWSK 901



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 27/374 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F +AK FL  +   GL+PD  +Y T+I+   + G+   AL + +EM    ++ N
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC-LEM 228
           ++ Y  L+ G  + G   +AK +   +       P  +TY  ++   C   R     LE+
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMA-SAGFTPTPLTYRRVLQA-CSGSRSPYVILEV 701

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + M       D   Y + +H LC  G    A  V  EM+  GI  D +T+NA+I G C+
Sbjct: 702 HELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCK 761

Query: 289 AGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +  +   F  +  M  +G   N+ ++N L+ GL   G++ EA ++   +++     ++ T
Sbjct: 762 SSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLT 821

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + +L+ G  K     +A+++  E+   G                  G +  A  L + M 
Sbjct: 822 YDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMK 881

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAI---FLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           + G    + T + L+NG+   SKL N      L K+M   G  P+  + +++     K  
Sbjct: 882 RRGVLHTSSTYDILLNGW---SKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPG 938

Query: 448 RFGEAYSFVKEMLE 461
              EA   +K + +
Sbjct: 939 MTWEARRLLKTLFK 952


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 228/449 (50%), Gaps = 24/449 (5%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PDV SY T+I+GL K GD+  A   + EM +R V  + V YN +I    K     RA E+
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              +VM     PN  TYN +++G C  G+ ++ + ++ +M  +  E D  TY S +  LC
Sbjct: 69  LTVMVM-----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K G    A +++  MV+ G+  D  TY  ++ G+   G + E  +L  +M + G  L+  
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            +NILI    +  KVDE + ++  +R++    ++  +  +I+GLCK              
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCK-------------- 229

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GRL DA     +M   G   N     SL++      K E A  L  E+  +G +P
Sbjct: 230 ----LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINP 285

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V +NT+++ LCK  R  E+      +   G  PD+ITYS LI+G C + K+D A+KL 
Sbjct: 286 NIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              +  G  PD   Y+ LI+G C   ++EDAL L+  M+     P+++TYN ++ GLF+T
Sbjct: 346 TGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRT 405

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITL 580
                A E++  I E   + ++ +YNI L
Sbjct: 406 RRTAAAKELYARITESGTQLELSTYNIIL 434



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 222/416 (53%), Gaps = 23/416 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV+YN +I+GL K G  D+    +  M       D+ TY S I  L KA  ++ A  V
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              MV    F    TYN+++ G+C +G+ ++   ++  M   G   +VV+YN L+  L +
Sbjct: 69  LTVMVMPNCF----TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           NGK  EA  I++ + ++    D TT+G L++G                     +G L + 
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGY------------------ASKGALVEM 166

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+  M ++G +L+ +  N L+  + +  K++  + +F +M ++G +P  V+Y T+I+G
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK+ R  +A    ++M++KG  P+++ Y+ LI+ LC   K + A +L  + L +G  P+
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  +N ++  LC  G+V ++ +L+  +      P+++TY+TL+DG    G  D A+++  
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLT 346

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++   L+PD ++Y+  + G C  +RM DA     +    G+ P  IT++I++  +
Sbjct: 347 GMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 216/419 (51%), Gaps = 23/419 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++   +KA    + + ++ + PD  +Y ++I  L K+  +  A+ V   M    V  N
Sbjct: 21  LFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPN 76

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN ++ G+   G   +A  I+ ++  +  + P+VVTYN +++ LCK G+  E  +++
Sbjct: 77  CFTYNSIMHGYCSSGQSEKAIGIFRKMCSD-GIEPDVVTYNSLMDYLCKNGKCTEARKIF 135

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M K   + D  TY + +HG    G +     +   MV++G+ +D   +N +I  + + 
Sbjct: 136 DSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQ 195

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ E   ++  M ++G   N V+Y  +I GL + G++D+A+  +E + +K    +   +
Sbjct: 196 EKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVY 255

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI+ LC      KA +++ E+ + G                 EGR+ ++  L + +  
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T ++L++G+  A K++ A+ L   M   G  P  V+Y+TLING CK+ R  +
Sbjct: 316 IGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMED 375

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           A +  KEM   G  PD+ITY+++++GL ++++   A +L  +  + G   +++ YNI++
Sbjct: 376 ALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 211/418 (50%), Gaps = 32/418 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I A  K    D+A++V   M        N I        C   Q EKA      +   
Sbjct: 51  SIIAALSKAQAMDRAMEVLTVMVMPNCFTYNSIMHG----YCSSGQSEKAIGIFRKMCSD 106

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++PDV +Y ++++ L K+G    A  +FD M +RG++ ++  Y  L+ G+  KG  +  
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++   L+++  +  +   +N++I    K  + DE + ++ +M++     ++  Y + I 
Sbjct: 167 HDLLA-LMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVID 225

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCL 308
           GLCK G ++ A   + +M++ G+  + V Y ++I   C   K ++  EL +E++ +    
Sbjct: 226 GLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINP 285

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N+V +N ++  L + G+V E+  +++LL     N D  T+  LI+G C  G ++ A+++L
Sbjct: 286 NIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                               M   G K ++ T ++L+NG+ + +++E+A+ LFKEM   G
Sbjct: 346 TG------------------MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            +P +++YN +++GL +  R   A      + E G + ++ TY++++    ++  + M
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMM 445



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 162/314 (51%), Gaps = 22/314 (7%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VVSYN +I GL + G VD+A   +  + ++  + D+ T+  +I  L K   +++A+++L
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             +                         N +T NS+M+G+  + + E AI +F++M   G
Sbjct: 70  TVM----------------------VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG 107

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+YN+L++ LCK  +  EA      M+++G KPD+ TY  L++G      +    
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMH 167

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L    +Q G   D  ++NILI       KV++ + ++S M+++   PN V Y T++DGL
Sbjct: 168 DLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  D A+  +  ++++ L P+++ Y   +  LC+  +   A E + + L +GI P  
Sbjct: 228 CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNI 287

Query: 609 ITWHILVRAVMNNG 622
           + ++ ++ ++   G
Sbjct: 288 VFFNTILDSLCKEG 301



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 85/158 (53%), Gaps = 4/158 (2%)

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD+++Y+ +I+GL +   +D A     + L +  +PD   YN +I  L  A  ++ A+++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            + M     +PN  TYN++M G   +G  +KA+ I+  +  + + PD+++YN  +  LC 
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             + ++A +  +  + RG+ P   T+  L+    + GA
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGA 162



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PDV  YN +I GL   G V+ A   Y  M  R   P+ VTYN+++  L K    D+A+E+
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
               L   + P+  +YN  + G CS  +   A          GI P  +T++ L+  +  
Sbjct: 69  ----LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 621 NGAST 625
           NG  T
Sbjct: 125 NGKCT 129


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 179/635 (28%), Positives = 303/635 (47%), Gaps = 53/635 (8%)

Query: 7   RLLNLLKAEKNPHTALALFDSATREPGYAH---SPHLFHH---ILRRLIDP--------K 52
           RLL+ L+A    H       S+      AH      LF H   +L RL+ P         
Sbjct: 49  RLLHSLQAVPADHLLSHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHLAAS 108

Query: 53  LVVHVSRILELIEIQKCYCPE--DVALSVIQAYGKNSMPDKALDVFQRMNEIF------G 104
           LV  + R    +  ++   P   D  LS++   G   + D A+    R+ E+        
Sbjct: 109 LVDLLHRAALALGPRRSALPSVVDTLLSLLADRG---LLDDAVLALARVRELRVPPNTRT 165

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C   +LC  R  E++      L+E+   P+V+++  +I+ L K GDL  A A+   M   
Sbjct: 166 CNHILLCLAR--ERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAI 223

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET---SVYPNVVTYNVMINGLCKCGR 221
           G   +VV YN LIDG+ K G+     E  E+LV E       P+VVTYN ++N  CK GR
Sbjct: 224 GCSPDVVTYNSLIDGYGKCGEL----EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            +     +  MK+     +  T+ +F+   CK G V  A +++ +M   G+  + VTY  
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG C+AG++ +   L   M ++G  LNVV+Y +L+ GL + GKV EA  ++ L+    
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
             A+   +  LI+G              + V +  E     A SL++ M   G +L+   
Sbjct: 400 IRANELLYTTLIHG--------------HFVYKNSE----RALSLLSEMKDKGMELDVSL 441

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             +L+ G     KL+ A  L  +M   G  P  V Y  +++   K  +  EA + +++M+
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G++P+++TY  L++GLC++  ID A+    + +  G  P+V  Y  L+ GLC  G+++
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A+ L   M  +    + V   +LMDG  K G+   A  +   ++   L+ D+  Y   +
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            G C+ + + +A E L++ +  GI P  + ++ L+
Sbjct: 622 WGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 279/590 (47%), Gaps = 32/590 (5%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATRE-----PGYAHSPHLFHHILRRLIDPKLVVHVS 58
           S   L  LL    +PH A +L D   R      P  +  P +   +L  L D  L+    
Sbjct: 89  SRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDA- 147

Query: 59  RILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE----IFGCEAGILCR 112
            +L L  +++   P +      ++    +    + A  +F+++       F      LC+
Sbjct: 148 -VLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCK 206

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           +    +A+  L  +   G  PDV +Y ++I+G  K G+L     +  EM   G   +VV 
Sbjct: 207 EGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVT 266

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN L++ F K G   RA   +  +  E  V  NVVT++  ++  CK G   E ++++ +M
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKRE-GVMANVVTFSTFVDAFCKNGMVREAMKLFAQM 325

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +    + +  TY   + G CKAG ++ A  +  EMV+ G+ ++ VTY  ++DG C+ GK+
Sbjct: 326 RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKV 385

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +++ +M R G   N + Y  LI G       + A+S+   +++K    D + +G L
Sbjct: 386 AEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGAL 445

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           I GLC    L++A  +LN+++E G                   + ++A +L+ +M   G 
Sbjct: 446 IWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGF 505

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + N  T  +L++G  +A  ++ AI  F +M   G  P V +Y  L++GLCK  R  +A  
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL 565

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            + EM++KG   D +  + L++G  +   +  A  L  + +  G   D+  Y   + G C
Sbjct: 566 LLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFC 625

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +   +++A ++ S M +    P+ V YN L++   K G+ ++A  + N +
Sbjct: 626 NLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 242/517 (46%), Gaps = 36/517 (6%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           A IL R R F  ++  L+ L   G  P + +  ++++ L ++   LG          R  
Sbjct: 77  AHILARARLFPHSRSLLSRLLAPGHHPHLAA--SLVDLLHRAALALGP--------RRSA 126

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV  + L+     +G    A     R V E  V PN  T N ++  L +    +   
Sbjct: 127 LPSVV--DTLLSLLADRGLLDDAVLALAR-VRELRVPPNTRTCNHILLCLAR----ERSS 179

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E+  R+ +     + FT+   I  LCK G++  A  +   M   G   D VTYN++IDG+
Sbjct: 180 ELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGY 239

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            + G+++E  +L   M   GC  +VV+YN L+    + G+++ A S +  ++ +   A+ 
Sbjct: 240 GKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANV 299

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T    ++  CKNG + +A++                  L  +M   G K N  T   L+
Sbjct: 300 VTFSTFVDAFCKNGMVREAMK------------------LFAQMRMKGMKPNEVTYTCLV 341

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G  +A +L++A+ L  EM ++G    VV+Y  L++GLCK  +  EA    + M   G +
Sbjct: 342 DGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIR 401

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            + + Y+ LI+G    K  + AL L  +   KG   DV++Y  LI GLC+  K+++A  L
Sbjct: 402 ANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSL 461

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            + M +    PN V Y  +MD  FK     +A+ +   +++   RP+I++Y   + GLC 
Sbjct: 462 LNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK 521

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + +A    N  +  G+ P    +  LV  +  NG
Sbjct: 522 AGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           E+A   L+ + +KG++ DV  YG +I GL     L  A ++ ++M E G++ N V Y  +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +D  FK      A  + +++ M++   PN+VTY  +++GLCK G  DE +  +++M    
Sbjct: 481 MDACFKARKESEAIALLQKM-MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            E +   Y + + GLCK G ++ A  +  EM++ G+ +D V   +++DG  + G +++ F
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L   M   G  L++  Y   + G      + EA  +   + E     D+  +  LIN  
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            K G + +A  + NE+E       ADAAS
Sbjct: 660 QKLGNMEEAAILQNEMESLLSCTNADAAS 688


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 256/515 (49%), Gaps = 21/515 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   ++F+        +   G +PD   YG  +   VK GDL  A+ +F+ M  R V  N
Sbjct: 41  LVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPN 100

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN+LI G  K+     A++++  + +   V PN VT+N +I+G CK G  D  + + 
Sbjct: 101 VFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV-PNRVTFNTLIDGYCKAGEVDVAIGLR 159

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RMKK + E    T+ S + GLCKA  +E A  +  E+  +G   D  TY+ + DG  ++
Sbjct: 160 ERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKS 219

Query: 290 GK-IKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
                   +L+ E +G+   ++  + +IL+ GL + GKV++A  + + L E         
Sbjct: 220 DDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVI 279

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  ++NG C+ G +++AI                    + +M+  G + N    NS+++ 
Sbjct: 280 YNTIVNGYCQIGDMDRAILT------------------IEQMESRGLRPNCIAFNSVIDK 321

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +   ++ A    K+M  KG +P+V +YN LI+G  ++  F   +  ++EM E G KP+
Sbjct: 322 FCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPN 381

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +I+Y  LIN LC+  KI  A  +    + +G  P+  +YN+LI G C+ GK+ +AL+ + 
Sbjct: 382 VISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD 441

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M K      +VTYN+L+ GL K G   +A E++  I      PD+I+YN  + G  +  
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 E        G+ PT  T+H L+      G
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 264/555 (47%), Gaps = 30/555 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K    D A+ + +RM +         F      LC+ R+ E+A+  LN +   
Sbjct: 141 TLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN 200

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGA-LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           G  PD ++Y  + +GL+KS D  GA L ++ E   +GV+ +    +IL++G  K+G   +
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+E+ + LV E  + P  V YN ++NG C+ G  D  +   ++M+      +   + S I
Sbjct: 261 AEEVLKSLV-EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
              C+   ++ AE   ++MV  GI     TYN +IDG+ R      CF++ E M   G  
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEK 379

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV+SY  LI  L ++GK+ EA  +   +  +    ++  + +LI+G C  G L +A++ 
Sbjct: 380 PNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRF 439

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            +E                  M K+G      T NSL+ G  +  KL+ A  +F  ++  
Sbjct: 440 FDE------------------MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITST 481

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V++YN+LI+G        +     + M + G KP + T+  LI+G C  + I + 
Sbjct: 482 GHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLK 540

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             L  + LQ   +PD  +YN +IH     G V+ A  L   M      P+  TYN+L+ G
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K G   +  ++ + +  + L P+  +Y++ ++G C     + A+ +  + L  G LP 
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660

Query: 608 TITWHILVRAVMNNG 622
               + L   +  +G
Sbjct: 661 VCICNELSTGLRKDG 675



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 270/558 (48%), Gaps = 39/558 (6%)

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A+++F+ M          ++    G LC++++   A++    +  + L P+  ++ T+I+
Sbjct: 85  AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLID 144

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV- 202
           G  K+G++  A+ + + M +  VE +++ +N L+ G  K      A+ I E   M   + 
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCK------ARRIEEARCMLNEIK 198

Query: 203 ----YPNVVTYNVMINGLCKCGR-FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
                P+  TY+++ +GL K        L+++        + D++T    ++GLCK G V
Sbjct: 199 CNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKV 258

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           E AE V + +VE G+    V YN +++G+C+ G +       E M  +G   N +++N +
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I    E   +D+A    + +  K       T+ +LI+G  +    ++  QIL E+EE GE
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE 378

Query: 377 -----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                            G++ +A  ++  M   G   NA   N L++G     KL  A+ 
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALR 438

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            F EMS+ G   T+V+YN+LI GLCK+ +  EA      +   G  PD+ITY+ LI+G  
Sbjct: 439 FFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYS 498

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            +      L+L     + G  P +  ++ LI G CS   ++    L++ M + N  P+ V
Sbjct: 499 NAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRV 557

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            YN ++    +TG   KA  +   +++  +RPD  +YN  + G     ++S+  + ++D 
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617

Query: 600 LCRGILPTTITWHILVRA 617
             +G++P   T+ +L++ 
Sbjct: 618 KAKGLIPEADTYSLLIQG 635



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 227/458 (49%), Gaps = 23/458 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + EKA+  L SL E GL P    Y T++NG  + GD+  A+   ++M  RG+  N
Sbjct: 252 LCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + +N +ID F +     +A+E W + ++   + P+V TYN++I+G  +   F  C ++ 
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEE-WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M++N  + +  +Y S I+ LCK G +  AE V R+MV  G+  +A  YN +IDG C  
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK++E    ++ M + G    +V+YN LI+GL + GK+ EA  ++ L+       D  T+
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG- 407
             LI+G    G   K ++                  L   M K G K    T + L++G 
Sbjct: 491 NSLISGYSNAGNSQKCLE------------------LYETMKKLGLKPTINTFHPLISGC 532

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  KL+    LF EM +   SP  V YN +I+   +     +A+S  KEM++ G +PD
Sbjct: 533 SKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPD 590

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ LI G  +  K+     L      KG  P+   Y++LI G C       A   Y 
Sbjct: 591 NKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYR 650

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            M +   +PN+   N L  GL K G   +A  I + ++
Sbjct: 651 EMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 248/508 (48%), Gaps = 35/508 (6%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + ++G  P       ++  LV+S      L +F EM   G   + + Y   +    K GD
Sbjct: 22  MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A E++E +     V PNV  YNV+I GLCK  R  +  +++  M       +  T+ 
Sbjct: 82  LKLAMELFETM-KRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFN 140

Query: 246 SFIHGLCKAGNVEGA----ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE--CFELW 299
           + I G CKAG V+ A    ER+ +E VE  I    +T+N+++ G C+A +I+E  C  L 
Sbjct: 141 TLIDGYCKAGEVDVAIGLRERMKKEKVEPSI----ITFNSLLSGLCKARRIEEARCM-LN 195

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE---KNCNADSTTHGVLINGLC 356
           E+       +  +Y+I+  GLL++   D A +  +L RE   K    D+ T  +L+NGLC
Sbjct: 196 EIKCNGFVPDGFTYSIIFDGLLKSD--DGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G + KA ++L  + E                  HG        N+++NG+ Q   ++ 
Sbjct: 254 KEGKVEKAEEVLKSLVE------------------HGLVPGEVIYNTIVNGYCQIGDMDR 295

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           AI   ++M  +G  P  +++N++I+  C+++   +A  +VK+M+ KG  P + TY++LI+
Sbjct: 296 AILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILID 355

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G  +        ++  +  + G  P+V  Y  LI+ LC  GK+ +A  +  +M  R  +P
Sbjct: 356 GYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLP 415

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N   YN L+DG    G   +AL  ++ + +  +   I++YN  +KGLC   ++ +A E  
Sbjct: 416 NANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
                 G  P  IT++ L+    N G S
Sbjct: 476 FLITSTGHCPDVITYNSLISGYSNAGNS 503



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SV 79
           AL  FD  ++  G   +   ++ +++ L     +     +  LI     +CP+ +   S+
Sbjct: 436 ALRFFDEMSKN-GIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI-TSTGHCPDVITYNSL 493

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           I  Y       K L++++ M ++                           GLKP + ++ 
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKL---------------------------GLKPTINTFH 526

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I+G  K G  L    +F+EM +  +  + V YN +I  + + G   +A  + + +V +
Sbjct: 527 PLISGCSKEGIKLKE-TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMV-D 584

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V P+  TYN +I G  K G+  E  ++ D MK      ++ TY   I G C   +  G
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
           A   YREM+E+G   +    N +  G  + G+++E
Sbjct: 645 AYVWYREMLENGFLPNVCICNELSTGLRKDGRLQE 679



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 1/139 (0%)

Query: 478 LCQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           +C   K+   +     F+ Q+G  P      +++  L  + K ++ L L+  M      P
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRP 64

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + + Y   M    K GD   A+E++  +   ++ P++  YN+ + GLC   R+ DA +  
Sbjct: 65  DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 597 NDALCRGILPTTITWHILV 615
            +   R ++P  +T++ L+
Sbjct: 125 GEMSVRNLVPNRVTFNTLI 143


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 246/495 (49%), Gaps = 22/495 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P VY+   ++  +VKSG+ +   +   EM +R +  +V  +NILI+    +G + ++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252

Query: 190 KEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             + ++  ME S Y P +VTYN +++  CK GRF   +E+ D MK    + D  TY   I
Sbjct: 253 SYLMQK--MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
           H LC++  +     + R+M +  I  + VTYN +I+GF   GK+    +L   M   G  
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V++N LI G +  G   EA+ ++ ++  K       ++GVL++GLCKN   + A   
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA--- 427

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                               RM ++G  +   T   +++G  +   L+ A+ L  EMS+ 
Sbjct: 428 ---------------RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P +V+Y+ LING CKV RF  A   V  +   G  P+ I YS LI   C+   +  A
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           +++    + +G T D   +N+L+  LC AGKV +A +    M     +PN V+++ L++G
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
              +G+  KA  +++ + +    P   +Y   LKGLC    + +A +FL           
Sbjct: 593 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652

Query: 608 TITWHILVRAVMNNG 622
           T+ ++ L+ A+  +G
Sbjct: 653 TVMYNTLLTAMCKSG 667



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 252/518 (48%), Gaps = 45/518 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           IL R R ++ A+  L  L             ++++G  KS  + GAL        R   +
Sbjct: 121 ILVRARMYDPARHILKEL-------------SLMSG--KSSFVFGALMTT----YRLCNS 161

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   Y+ILI  + ++G    + EI+ RL+      P+V T N ++  + K G   E + +
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 217

Query: 229 WDRMKKNEREK---DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           W  +K+  + K   D  T+   I+ LC  G+ E +  + ++M +SG     VTYN ++  
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           +C+ G+ K   EL + M  KG   +V +YN+LI  L  + ++ +   +   +R++  + +
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LING                     EG++  A+ L+N M   G   N  T N+L
Sbjct: 338 EVTYNTLINGF------------------SNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G I     + A+ +F  M  KG +P+ VSY  L++GLCK   F  A  F   M   G 
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
               ITY+ +I+GLC++  +D A+ L  +  + G  PD+  Y+ LI+G C  G+ + A +
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           +   + +    PN + Y+TL+    + G   +A+ I+  ++ E    D  ++N+ +  LC
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++++A EF+      GILP T+++  L+    N+G
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/602 (23%), Positives = 263/602 (43%), Gaps = 90/602 (14%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  +F+ A+ F   +   G+     +Y  +I+GL K+G L  A+ + +EM + G++ +
Sbjct: 418  LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            +V Y+ LI+GF K G +  AKEI  R +    + PN + Y+ +I   C+ G   E + ++
Sbjct: 478  IVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            + M      +D FT+   +  LCKAG V  AE   R M   GI  + V+++ +I+G+  +
Sbjct: 537  EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596

Query: 290  GKIKECFELWEVMGRKG------------------------------------CLNVVSY 313
            G+  + F +++ M + G                                     ++ V Y
Sbjct: 597  GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656

Query: 314  NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            N L+  + ++G + +A+S++  + +++   DS T+  LI+GLC+ G    AI    E E 
Sbjct: 657  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716

Query: 374  GGE------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             G                   G+         +MD  G   +  T N++++G+ +  K+E
Sbjct: 717  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
                L  EM  +   P + +YN L++G  K +    ++   + ++  G  PD +T   L+
Sbjct: 777  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS-------- 527
             G+C+S  +++ LK+   F+ +G   D   +N+LI   C+ G++  A  L          
Sbjct: 837  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896

Query: 528  ---------------------------NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                                        M K+   P    Y  L++GL + GD   A  +
Sbjct: 897  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 956

Query: 561  WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
               ++  ++ P  ++ +  ++ L  C +  +A   L   L   ++PT  ++  L+     
Sbjct: 957  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016

Query: 621  NG 622
            NG
Sbjct: 1017 NG 1018



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 247/553 (44%), Gaps = 56/553 (10%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  +  +A+ F+  +   G+ P+  S+  +ING   SG+ L A +VFDEM + G    
Sbjct: 558  LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               Y  L+ G  K G ++R  E + + +       + V YN ++  +CK G   + + ++
Sbjct: 618  FFTYGSLLKGLCK-GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGN---------------------------VEG--- 259
              M +     DS+TY S I GLC+ G                            V+G   
Sbjct: 677  GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736

Query: 260  -----AERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVS 312
                 A   +RE +++ G   D VT NAMIDG+ R GKI++  +L   MG + G  N+ +
Sbjct: 737  AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN--- 369
            YNIL+ G  +   V  +  ++  +       D  T   L+ G+C++  L   ++IL    
Sbjct: 797  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856

Query: 370  ----EVEEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
                EV+              G +  A  LV  M   G  L+  TC+++++   +  + +
Sbjct: 857  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             +  +  EMS++G SP    Y  LINGLC+V     A+   +EM+     P  +  S ++
Sbjct: 917  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
              L +  K D A  L    L+    P +  +  L+H  C  G V +AL+L   M      
Sbjct: 977  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC-SRMSDAFE 594
             +LV+YN L+ GL   GD   A E++  +  +    +  +Y   ++GL +  +  S A  
Sbjct: 1037 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1096

Query: 595  FLNDALCRGILPT 607
             L D L RG + +
Sbjct: 1097 ILKDLLARGFITS 1109


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 248/505 (49%), Gaps = 24/505 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+     A+R+L+ +   G +PD +++ ++I G  ++  L  A  +F +M  RG   +
Sbjct: 139 LCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQD 198

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI+GF + G    A E++  +       P++ T+  ++ GLC  GR +E L M 
Sbjct: 199 AVSYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTHAALVKGLCDAGRGEEGLCML 253

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK+      +  Y + +   C+    E AE++  EM +SG+    VT   +++ +CR 
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCRE 313

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++     ++E M  KGC  NV +YN +++G    GKV +A+++ + +RE     D  T+
Sbjct: 314 GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI G C +G++  A ++L  +E  G G  AD                 YT N L++  
Sbjct: 374 NLLIRGQCIDGHIGSAFRLLRLME--GNGLAADQ----------------YTYNVLIDAL 415

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ A  LF  +  +G  P  V++NT+INGLCK  +F  A +F++ M+  G+ PD 
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TYS  I  LC++K     L    + LQK   P    Y I+I+ L +      A +++  
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  + C P++VTY T +      G  D+A  +   + + R   D ++YN  + G  S  +
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595

Query: 589 MSDAFEFLNDALCRGILPTTITWHI 613
              A   L        +P   T+ I
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTFFI 620



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 20/436 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P   TYN +I  LC+             M ++    D+FT+ S I G C+   +E A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           + +M   G   DAV+Y A+I+GFC AG+I E  EL+  M +    ++ ++  L++GL + 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQP---DMYTHAALVKGLCDA 243

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
           G+ +E + + + ++E      +  +  L++  C+     +A +ILNE+ + G        
Sbjct: 244 GRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTC 303

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                    EGR++ A  +   M   GC+ N +T N+++ GF  A K+  A+ L  +M  
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P VV+YN LI G C     G A+  ++ M   G   D  TY++LI+ LC++ K+D 
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L      +G  P+   +N +I+GLC AGK + A     NM      P+  TY+  ++
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIE 483

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L KT    + L   + +L++ ++P  ++Y I +  L +      A       + +G  P
Sbjct: 484 NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543

Query: 607 TTITWHILVRAVMNNG 622
             +T+   VRA  N G
Sbjct: 544 DVVTYTTSVRAYCNEG 559



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 229/507 (45%), Gaps = 35/507 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+ +   A R   S+  KG +P+V++Y  ++ G   +G +  A+A+ D+M E GVE +V
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN+LI G    G    A  +  RL+    +  +  TYNV+I+ LCK G+ DE   ++D
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA- 289
            ++      +S T+ + I+GLCKAG  + A      M+ +G   D  TY+  I+  C+  
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTK 489

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G  +  F + E++ +    + V+Y I+I  L        A  IW  +  + C+ D  T+ 
Sbjct: 490 GSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYT 549

Query: 350 VLINGLCKNGYLNKAIQILNE-------VEEGGEGRLADAASLVNRMDKHGCKLNAYT-C 401
             +   C  G L++A  ++ E       V+      L D  + + + D+    L   T  
Sbjct: 550 TSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGV 609

Query: 402 NSLMNGFI-------------------------QASKLENAIFLFKEMSRKGCSPTVVSY 436
            S+ N F                          +  +L +   LF+ M +     +  +Y
Sbjct: 610 ASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTY 669

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            +++ G  +  R  E  S V  M E+    +   Y+ L+N  C+ +    A  L C  + 
Sbjct: 670 LSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIG 729

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            GF P++  Y  L+ GL + G+ + A +++ + + +    + + +  ++DG  + G  D 
Sbjct: 730 HGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADM 789

Query: 557 ALEIWNHILEERLRPDIISYNITLKGL 583
             ++ + + + + +P   +Y +  + L
Sbjct: 790 CHDMISMLEQMKCKPSDETYAMLTEEL 816



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 233/536 (43%), Gaps = 43/536 (8%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++ L + Q+M E+        +     + CR+++ E+A++ LN +++ GL P V +   V
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIV 306

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           +N   + G + GA+ VF+ M  +G E NV  YN ++ GF   G   +A  + +++  E  
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM-RECG 365

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V P+VVTYN++I G C  G       +   M+ N    D +TY   I  LCK G V+ A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
            ++  +   GI  ++VT+N +I+G C+AGK        E M   G   +  +Y+  I  L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +     E +   + + +K+    +  + ++IN L        A +I  ++   G     
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDV 545

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       EGRL +A ++V  M K    ++A   N+L++G     + + A+ + K 
Sbjct: 546 VTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKH 605

Query: 424 MSRKGCSPTVVSYNTLI----------------NGLCKVERFGEAYSFVKEMLEKGWKPD 467
           M+     P   ++  L+                  + K     + +   + M +      
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSS 665

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY  ++ G  + +++D    L     ++    +  +YN L++  C      DA  L  
Sbjct: 666 ARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLC 725

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +M     +PNL+ Y  L+ GL   G  D+A EI+     +    D I + + + G 
Sbjct: 726 SMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGF 781



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 5/221 (2%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGC-SPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           SL+  F + +     + LF  M R    +PT  +YN LI  LC+      A  ++  M+ 
Sbjct: 98  SLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVR 157

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            GW+PD  T++ LI G C+++++++A  L C+   +GF+ D   Y  LI G C AG++++
Sbjct: 158 SGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDE 217

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL+L+  M +    P++ T+  L+ GL   G  ++ L +   + E   RP   +Y   + 
Sbjct: 218 ALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVD 273

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             C   +  +A + LN+    G++P  +T  I+V A    G
Sbjct: 274 LWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREG 314


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 246/495 (49%), Gaps = 22/495 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P VY+   ++  +VKSG+ +   +   EM +R +  +V  +NILI+    +G + ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212

Query: 190 KEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             + ++  ME S Y P +VTYN +++  CK GRF   +E+ D MK    + D  TY   I
Sbjct: 213 SYLMQK--MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
           H LC++  +     + R+M +  I  + VTYN +I+GF   GK+    +L   M   G  
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V++N LI G +  G   EA+ ++ ++  K       ++GVL++GLCKN   + A   
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA--- 387

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                               RM ++G  +   T   +++G  +   L+ A+ L  EMS+ 
Sbjct: 388 ---------------RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P +V+Y+ LING CKV RF  A   V  +   G  P+ I YS LI   C+   +  A
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           +++    + +G T D   +N+L+  LC AGKV +A +    M     +PN V+++ L++G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
              +G+  KA  +++ + +    P   +Y   LKGLC    + +A +FL           
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612

Query: 608 TITWHILVRAVMNNG 622
           T+ ++ L+ A+  +G
Sbjct: 613 TVMYNTLLTAMCKSG 627



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 252/518 (48%), Gaps = 45/518 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           IL R R ++ A+  L  L             ++++G  KS  + GAL        R   +
Sbjct: 81  ILVRARMYDPARHILKEL-------------SLMSG--KSSFVFGALMTT----YRLCNS 121

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   Y+ILI  + ++G    + EI+ RL+      P+V T N ++  + K G   E + +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 177

Query: 229 WDRMKKNEREK---DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           W  +K+  + K   D  T+   I+ LC  G+ E +  + ++M +SG     VTYN ++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           +C+ G+ K   EL + M  KG   +V +YN+LI  L  + ++ +   +   +R++  + +
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LING                     EG++  A+ L+N M   G   N  T N+L
Sbjct: 298 EVTYNTLINGF------------------SNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G I     + A+ +F  M  KG +P+ VSY  L++GLCK   F  A  F   M   G 
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
               ITY+ +I+GLC++  +D A+ L  +  + G  PD+  Y+ LI+G C  G+ + A +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           +   + +    PN + Y+TL+    + G   +A+ I+  ++ E    D  ++N+ +  LC
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++++A EF+      GILP T+++  L+    N+G
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/602 (23%), Positives = 263/602 (43%), Gaps = 90/602 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F+ A+ F   +   G+     +Y  +I+GL K+G L  A+ + +EM + G++ +
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y+ LI+GF K G +  AKEI  R +    + PN + Y+ +I   C+ G   E + ++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M      +D FT+   +  LCKAG V  AE   R M   GI  + V+++ +I+G+  +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

Query: 290 GKIKECFELWEVMGRKG------------------------------------CLNVVSY 313
           G+  + F +++ M + G                                     ++ V Y
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+  + ++G + +A+S++  + +++   DS T+  LI+GLC+ G    AI    E E 
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 374 GGE------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            G                   G+         +MD  G   +  T N++++G+ +  K+E
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
               L  EM  +   P + +YN L++G  K +    ++   + ++  G  PD +T   L+
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS-------- 527
            G+C+S  +++ LK+   F+ +G   D   +N+LI   C+ G++  A  L          
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 528 ---------------------------NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                                       M K+   P    Y  L++GL + GD   A  +
Sbjct: 857 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              ++  ++ P  ++ +  ++ L  C +  +A   L   L   ++PT  ++  L+     
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 621 NG 622
           NG
Sbjct: 977 NG 978



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 247/553 (44%), Gaps = 56/553 (10%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  +  +A+ F+  +   G+ P+  S+  +ING   SG+ L A +VFDEM + G    
Sbjct: 518  LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               Y  L+ G  K G ++R  E + + +       + V YN ++  +CK G   + + ++
Sbjct: 578  FFTYGSLLKGLCK-GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGN---------------------------VEG--- 259
              M +     DS+TY S I GLC+ G                            V+G   
Sbjct: 637  GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 696

Query: 260  -----AERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVS 312
                 A   +RE +++ G   D VT NAMIDG+ R GKI++  +L   MG + G  N+ +
Sbjct: 697  AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN--- 369
            YNIL+ G  +   V  +  ++  +       D  T   L+ G+C++  L   ++IL    
Sbjct: 757  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816

Query: 370  ----EVEEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
                EV+              G +  A  LV  M   G  L+  TC+++++   +  + +
Sbjct: 817  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             +  +  EMS++G SP    Y  LINGLC+V     A+   +EM+     P  +  S ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
              L +  K D A  L    L+    P +  +  L+H  C  G V +AL+L   M      
Sbjct: 937  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC-SRMSDAFE 594
             +LV+YN L+ GL   GD   A E++  +  +    +  +Y   ++GL +  +  S A  
Sbjct: 997  LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056

Query: 595  FLNDALCRGILPT 607
             L D L RG + +
Sbjct: 1057 ILKDLLARGFITS 1069


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 283/576 (49%), Gaps = 28/576 (4%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALD-- 94
            P +F  ++R     +          LI   +   P   + +++ A  +   P  A D  
Sbjct: 24  QPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAY 83

Query: 95  --VFQRMNEIFGCEAGIL----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
             VF   +E+      I+    C+  +F+K    ++ + ++ + PDV ++  +++   ++
Sbjct: 84  RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 143

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GD   A+A+ D M  +G++  +V YN ++ G  + G + +A E+++ +  +  V P+V +
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD-DFGVAPDVRS 202

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           + ++I G C+ G  +E L+++  M+    + D  ++   I    + G ++ A    REM 
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
             G+  D V Y  +I GFCRAG + +   + + M   GCL +VV+YN L+ GL +  ++ 
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A  +   +RE+    D  T   LI+G C  G L+KA+Q                  L +
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ------------------LFD 364

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M     + +  T N+L++G  +   L+ A  L+ +M  +   P  V+Y+ LI+  C+  
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  +A+ F+ EM+ KG  P+++TY+ +I G C+S  +    K   + +    +PD+  YN
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LIHG     K+ DA +L + M+K    P++VTYN L++G    G+  +A  I+  +  +
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            + PD  +Y   + G  +     +AF+  ++ L RG
Sbjct: 545 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 242/492 (49%), Gaps = 20/492 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+   +++   K+ +     AV  EM +R V  +VV +N+++D  F+ GD   A  + 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +V    + P +VTYN ++ GLC+ G +D+  E++  M       D  ++   I G C+
Sbjct: 154 DSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            G +E A ++Y+EM   GI  D V+++ +I  F R GK+         M   G + + V 
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ++I G    G + +A+ + + +    C  D  T+  L+NGLCK               
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK--------------- 317

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              E RL DA  L+N M + G   +  T  +L++G+    KL+ A+ LF  M  +   P 
Sbjct: 318 ---ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           +V+YNTLI+G+C+     +A     +M  +   P+ +TYS+LI+  C+  +++ A     
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + + KG  P++  YN +I G C +G V    +    M      P+L+TYNTL+ G  K  
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
               A ++ N + +E+++PD+++YN+ + G      + +A         +GI P   T+ 
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554

Query: 613 ILVRAVMNNGAS 624
            ++   +  G S
Sbjct: 555 SMINGHVTAGNS 566



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 235/463 (50%), Gaps = 20/463 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +F    E N    NI++  + K  ++ +   +   +  +  V+P+VVT+NVM++   + G
Sbjct: 86  VFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAG 144

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +  + + D M     +    TY S + GLC++G  + A  V++EM + G+  D  ++ 
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +I GFCR G+I+E  ++++ M  +G   ++VS++ LI      GK+D A++    +R  
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D   + ++I G C+ G ++ A+++ +E                  M   GC  +  
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDE------------------MVGCGCLPDVV 306

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L+NG  +  +L +A  L  EM  +G  P + ++ TLI+G C   +  +A      M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           L +  +PD++TY+ LI+G+C+   +D A  L      +   P+   Y+ILI   C  G+V
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           EDA      M  +  +PN++TYN+++ G  ++G+  K  +    ++  ++ PD+I+YN  
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + G     +M DAF+ LN      + P  +T+++L+     +G
Sbjct: 487 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 529



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 157/281 (55%), Gaps = 4/281 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++R+   A+  LN + E+G+ PD+ ++ T+I+G    G L  AL +FD M  + +  +
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN LIDG  ++GD  +A ++W+ +     ++PN VTY+++I+  C+ G+ ++     
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 433

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       +  TY S I G C++GNV   ++  ++M+ + +  D +TYN +I G+ + 
Sbjct: 434 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493

Query: 290 GKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ + F+L  +M + K   +VV+YN+LI G   +G V EA  I+E +  K    D  T+
Sbjct: 494 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEG--RLADAASLVN 387
             +ING    G   +A Q+ +E+ + G+   R A     VN
Sbjct: 554 MSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVN 594


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 246/488 (50%), Gaps = 20/488 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +G ++  LVK       +++  +M  +G+  ++V  +ILI+ F   G    +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    PN +  N ++ GLC  G   + L   D++     + D  +Y   ++GLC
Sbjct: 68  LGK-ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G    A ++ R + +     D V Y+ +IDG C+   + E ++L+  M  +G   +V+
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G++ EA  +   +  KN N +  T+  LI+ LCK              
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCK-------------- 232

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ ++ +L+  M K G K +    + LM+G+    +++ A  +F  M + G +P
Sbjct: 233 ----EGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SYN +INGLCK +R  EA + ++EML K   PD +TYS LI+GLC+  +I   L L 
Sbjct: 289 DVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLT 348

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   ++  YN L+ GLC    ++ A+ L+  MK+R   PN  TY  L+DGL K 
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   K   ++ H+L +    D+ +Y + + GLC      +A    +     G +P  +T+
Sbjct: 409 GRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTF 468

Query: 612 HILVRAVM 619
            I++R+++
Sbjct: 469 EIIIRSLL 476



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 255/505 (50%), Gaps = 20/505 (3%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L + + +         +  KG+ PD+ +   +IN     G +  + +V  ++ 
Sbjct: 13  FGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKIL 72

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G + N +  N L+ G   KG+  ++    +++V +     + V+Y +++NGLCK G  
Sbjct: 73  KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQ-GFQMDQVSYGILLNGLCKIGET 131

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              +++   ++      D   Y + I GLCK   V+ A  +Y EM   GIF D +TY  +
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC AG++ E F L   M  K    N+ +YN LI  L + GKV E+ ++  ++ +K  
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D   + +L++G C  G + KA QI                 LV  M + G   + Y+ 
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIF----------------LV--MVQTGVNPDVYSY 293

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++NG  +  +++ A+ L +EM  K   P  V+Y++LI+GLCK+ R        KEM  
Sbjct: 294 NIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH 353

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G   +++TY+ L++GLC+++ +D A+ L  +  ++G  P+   Y  LI GLC  G+++ 
Sbjct: 354 RGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
              L+ ++  +    ++ TY  ++ GL K G  D+AL + + + +    P+ +++ I ++
Sbjct: 414 GQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIR 473

Query: 582 GLCSCSRMSDAFEFLNDALCRGILP 606
            L        A + L++ + +G+LP
Sbjct: 474 SLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 208/422 (49%), Gaps = 19/422 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P++VT +++IN  C  G+      +  ++ K   + ++    + + GLC  G V+ + 
Sbjct: 41  IVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL 100

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGL 320
             + ++V  G  +D V+Y  +++G C+ G+ +   +L   +  R    +VV Y+ +I GL
Sbjct: 101 HFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGL 160

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++  VDEA  ++  +  +    D  T+  LI G C                    G+L 
Sbjct: 161 CKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCL------------------AGQLM 202

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L+N M       N YT N+L++   +  K++ +  L   M++KG  P VV Y+ L+
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G C V    +A      M++ G  PD+ +Y+++INGLC+ K++D A+ L  + L K   
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD   Y+ LI GLC  G++   L L   M  R    NLVTYN+L+DGL K  + DKA+ +
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  + E  ++P+  +Y   + GLC   R+          L +G      T+ +++  +  
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442

Query: 621 NG 622
            G
Sbjct: 443 EG 444



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+  +   A + L ++ ++  +PDV  Y T+I+GL K   +  A 
Sbjct: 111 FQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAY 170

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            ++ EM  RG+  +V+ Y  LI GF   G  M A  +   ++++ ++ PN+ TYN +I+ 
Sbjct: 171 DLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK-NINPNIYTYNTLIDT 229

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LCK G+  E   +   M K   + D   Y   + G C  G V+ A++++  MV++G+  D
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
             +YN +I+G C+  ++ E   L   M  K  + + V+Y+ LI GL + G++   + + +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  +   A+  T+  L++GLCKN  L+KAI                  +L  +M + G 
Sbjct: 350 EMHHRGQPANLVTYNSLLDGLCKNQNLDKAI------------------ALFMKMKERGI 391

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + N YT  +L++G  +  +L+    LF+ +  KG    V +Y  +I+GLCK   F EA +
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
              +M + G  P+ +T+ ++I  L +  + D A KL  + + KG  P
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 186/363 (51%), Gaps = 28/363 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           ++I    K+ + D+A D++  MN      ++      I   C   Q  +A   LN +  K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P++Y+Y T+I+ L K G +  +  +   M ++GV+ +VV Y+IL+DG+   G+  +A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K+I+  +V +T V P+V +YN++INGLCK  R DE + +   M       D+ TY S I 
Sbjct: 275 KQIFLVMV-QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK G +     + +EM   G   + VTYN+++DG C+   + +   L+  M  +G   
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +Y  LI GL + G++ +  ++++ L  K    D  T+ V+I+GLCK           
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK----------- 442

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  EG   +A ++ ++M+ +GC  NA T   ++   ++  + + A  L  EM  KG
Sbjct: 443 -------EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495

Query: 429 CSP 431
             P
Sbjct: 496 LLP 498



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 166/333 (49%), Gaps = 17/333 (5%)

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           ++ +  ++  L++       IS+ + +  K    D  T  +LIN  C  G +  +  +L 
Sbjct: 10  IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           ++ + G                 +G +  +    +++   G +++  +   L+NG  +  
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +   AI L + +  +   P VV Y+T+I+GLCK +   EAY    EM  +G  PD+ITY+
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI G C + ++  A  L  + + K   P++  YN LI  LC  GKV+++  L + M K+
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++V Y+ LMDG    G+  KA +I+  +++  + PD+ SYNI + GLC   R+ +A
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEA 309

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
              L + L + ++P T+T+  L+  +   G  T
Sbjct: 310 MNLLREMLHKNMIPDTVTYSSLIDGLCKLGRIT 342


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 246/495 (49%), Gaps = 22/495 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P VY+   ++  +VKSG+ +   +   EM +R +  +V  +NILI+    +G + ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212

Query: 190 KEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             + ++  ME S Y P +VTYN +++  CK GRF   +E+ D MK    + D  TY   I
Sbjct: 213 SYLMQK--MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
           H LC++  +     + R+M +  I  + VTYN +I+GF   GK+    +L   M   G  
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            N V++N LI G +  G   EA+ ++ ++  K       ++GVL++GLCKN   + A   
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA--- 387

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                               RM ++G  +   T   +++G  +   L+ A+ L  EMS+ 
Sbjct: 388 ---------------RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P +V+Y+ LING CKV RF  A   V  +   G  P+ I YS LI   C+   +  A
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           +++    + +G T D   +N+L+  LC AGKV +A +    M     +PN V+++ L++G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
              +G+  KA  +++ + +    P   +Y   LKGLC    + +A +FL           
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612

Query: 608 TITWHILVRAVMNNG 622
           T+ ++ L+ A+  +G
Sbjct: 613 TVMYNTLLTAMCKSG 627



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 252/518 (48%), Gaps = 45/518 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           IL R R ++ A+  L  L             ++++G  KS  + GAL        R   +
Sbjct: 81  ILVRARMYDPARHILKEL-------------SLMSG--KSSFVFGALMTT----YRLCNS 121

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   Y+ILI  + ++G    + EI+ RL+      P+V T N ++  + K G   E + +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 177

Query: 229 WDRMKKNEREK---DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           W  +K+  + K   D  T+   I+ LC  G+ E +  + ++M +SG     VTYN ++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           +C+ G+ K   EL + M  KG   +V +YN+LI  L  + ++ +   +   +R++  + +
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LING                     EG++  A+ L+N M   G   N  T N+L
Sbjct: 298 EVTYNTLINGF------------------SNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G I     + A+ +F  M  KG +P+ VSY  L++GLCK   F  A  F   M   G 
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
               ITY+ +I+GLC++  +D A+ L  +  + G  PD+  Y+ LI+G C  G+ + A +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           +   + +    PN + Y+TL+    + G   +A+ I+  ++ E    D  ++N+ +  LC
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++++A EF+      GILP T+++  L+    N+G
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/602 (23%), Positives = 263/602 (43%), Gaps = 90/602 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F+ A+ F   +   G+     +Y  +I+GL K+G L  A+ + +EM + G++ +
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y+ LI+GF K G +  AKEI  R +    + PN + Y+ +I   C+ G   E + ++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M      +D FT+   +  LCKAG V  AE   R M   GI  + V+++ +I+G+  +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

Query: 290 GKIKECFELWEVMGRKG------------------------------------CLNVVSY 313
           G+  + F +++ M + G                                     ++ V Y
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+  + ++G + +A+S++  + +++   DS T+  LI+GLC+ G    AI    E E 
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 374 GGE------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            G                   G+         +MD  G   +  T N++++G+ +  K+E
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
               L  EM  +   P + +YN L++G  K +    ++   + ++  G  PD +T   L+
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS-------- 527
            G+C+S  +++ LK+   F+ +G   D   +N+LI   C+ G++  A  L          
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 528 ---------------------------NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                                       M K+   P    Y  L++GL + GD   A  +
Sbjct: 857 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              ++  ++ P  ++ +  ++ L  C +  +A   L   L   ++PT  ++  L+     
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 621 NG 622
           NG
Sbjct: 977 NG 978



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 247/553 (44%), Gaps = 56/553 (10%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  +  +A+ F+  +   G+ P+  S+  +ING   SG+ L A +VFDEM + G    
Sbjct: 518  LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               Y  L+ G  K G ++R  E + + +       + V YN ++  +CK G   + + ++
Sbjct: 578  FFTYGSLLKGLCK-GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGN---------------------------VEG--- 259
              M +     DS+TY S I GLC+ G                            V+G   
Sbjct: 637  GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 696

Query: 260  -----AERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVS 312
                 A   +RE +++ G   D VT NAMIDG+ R GKI++  +L   MG + G  N+ +
Sbjct: 697  AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN--- 369
            YNIL+ G  +   V  +  ++  +       D  T   L+ G+C++  L   ++IL    
Sbjct: 757  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816

Query: 370  ----EVEEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
                EV+              G +  A  LV  M   G  L+  TC+++++   +  + +
Sbjct: 817  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             +  +  EMS++G SP    Y  LINGLC+V     A+   +EM+     P  +  S ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
              L +  K D A  L    L+    P +  +  L+H  C  G V +AL+L   M      
Sbjct: 937  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC-SRMSDAFE 594
             +LV+YN L+ GL   GD   A E++  +  +    +  +Y   ++GL +  +  S A  
Sbjct: 997  LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056

Query: 595  FLNDALCRGILPT 607
             L D L RG + +
Sbjct: 1057 ILKDLLARGFITS 1069


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 242/479 (50%), Gaps = 22/479 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + E+ +R + + W +G  P    Y  +I+G  + GD+   L +  EM  +G+   
Sbjct: 286 LCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPT 345

Query: 170 VVCYNILIDGFFKKGDYMRAKEI-WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           VV Y  +I    +K D  + + + WE  + E  + PNV  YN +I  LCKC    + L +
Sbjct: 346 VVTYGAIIHWLGRKSDLTKIESLLWE--MKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            ++M  +  + D  T+ + I   C+ G+VE A ++ RE +   +  + ++Y  +I GFC 
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 289 AGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++    +L  E++GR    +VV+   LI GL+ +G+VDEA+ + E + E+    D+  
Sbjct: 464 RGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI 523

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + VLI+GLCK   L+ A  +L E+ E                     + + +   +L++G
Sbjct: 524 YNVLISGLCKKRMLSAAKNLLVEMLE------------------QKVQPDKFVYTTLIDG 565

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           FI++ KL +A  +F+ M  KG    +V+YN +I G CK     EA   +  M + G  PD
Sbjct: 566 FIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPD 625

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ LI+G  +   I  AL+  C  +++   P++  Y  LI G C+ G  + A  L++
Sbjct: 626 EFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFA 685

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           +M+     PN+V Y  L+  LFK     +A   + H+L     P+  + +  + GL +C
Sbjct: 686 SMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNC 744



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 222/479 (46%), Gaps = 39/479 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R   +A   LN +      PDV ++ T+I    + GD+  AL +  E   R +E N
Sbjct: 391 LCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPN 450

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + Y  LI GF  +G+ M A ++   ++      P+VVT   +I+GL   G+ DE L + 
Sbjct: 451 QLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHT-PDVVTLGALIHGLVVSGQVDEALMVR 509

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M + +   D+  Y   I GLCK   +  A+ +  EM+E  +  D   Y  +IDGF R+
Sbjct: 510 EKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRS 569

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ +  +++E M  KG   ++V+YN +I+G  ++G ++EA+     +R+  C  D  T+
Sbjct: 570 DKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTY 629

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G  K G +  A++ L +                  M K  CK N  T  SL+ G+
Sbjct: 630 TTLIDGYAKKGDIKAALRFLCD------------------MMKRRCKPNIVTYASLICGY 671

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                 ++A  LF  M  +G  P VV Y  LI  L K ++  +A ++ + ML     P+ 
Sbjct: 672 CNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPND 731

Query: 469 ITYSLLINGLC---------------QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            T   L+NGL                Q+ K    L +    +  G  P ++ YN +I  L
Sbjct: 732 ATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSL 791

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           C    +  A++L   M  + C+P+ VT+ +L+ G    G   K    W   L    + D
Sbjct: 792 CRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGK----WRSALPNEFQQD 846



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 221/488 (45%), Gaps = 20/488 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D YS   ++ GL   G +     + +  +  G     V YN+LIDG+ ++GD  R   + 
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
             + M+  + P VVTY  +I+ L +     +   +   MK+     +   Y + I+ LCK
Sbjct: 335 GEMEMK-GIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK 393

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVS 312
             +   A  V  +MV S    D VT+N +I  FCR G ++E  +L  E + R+   N +S
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y  LI G    G+V  A  +   +  +    D  T G LI+GL  +G +++A+ +  ++ 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
           E     + DA              N Y  N L++G  +   L  A  L  EM  +   P 
Sbjct: 514 E--RQVMPDA--------------NIY--NVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
              Y TLI+G  + ++  +A    + M EKG   D++ Y+ +I G C+S  ++ A+    
Sbjct: 556 KFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMS 615

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
              + G  PD   Y  LI G    G ++ AL+   +M KR C PN+VTY +L+ G    G
Sbjct: 616 SMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIG 675

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           + D A  ++  +  E L P+++ Y + +  L    +   A  +    L     P   T H
Sbjct: 676 NTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMH 735

Query: 613 ILVRAVMN 620
            LV  + N
Sbjct: 736 YLVNGLTN 743



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 215/465 (46%), Gaps = 22/465 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYN--ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
           A  ++ EM  R  E     Y+  +++ G   +G     + + E    E  V P  V YNV
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCV-PGAVFYNV 316

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I+G C+ G     L +   M+         TY + IH L +  ++   E +  EM E G
Sbjct: 317 LIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERG 376

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           +  +   YN +I   C+     +    L +++  +   +VV++N LI      G V+EA+
Sbjct: 377 LSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEAL 436

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +      +    +  ++  LI+G C  G +  A  +L  VE  G G   D  +L     
Sbjct: 437 KLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLL--VEMIGRGHTPDVVTL----- 489

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                       +L++G + + +++ A+ + ++M+ +   P    YN LI+GLCK     
Sbjct: 490 -----------GALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLS 538

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A + + EMLE+  +PD   Y+ LI+G  +S K+  A K+     +KG   D+  YN +I
Sbjct: 539 AAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMI 598

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C +G + +A+   S+M+K  C+P+  TY TL+DG  K GD   AL     +++ R +
Sbjct: 599 KGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCK 658

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           P+I++Y   + G C+      A          G+ P  + + +L+
Sbjct: 659 PNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLI 703



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 24/404 (5%)

Query: 224 ECLE-MWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           EC   ++  M   +RE   D ++ C  + GLC  G VE   R+       G    AV YN
Sbjct: 256 ECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN 315

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI-WELLRE 338
            +IDG+CR G +     L   M  KG +  VV+Y  +I  L     + +  S+ WE+ +E
Sbjct: 316 VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEM-KE 374

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +  + +   +  +I  LCK    ++A+ +LN++             + +R D      + 
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQM-------------VASRFDP-----DV 416

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T N+L+  F +   +E A+ L +E  R+   P  +SY  LI+G C       A   + E
Sbjct: 417 VTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVE 476

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+ +G  PD++T   LI+GL  S ++D AL +  +  ++   PD  +YN+LI GLC    
Sbjct: 477 MIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM 536

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +  A  L   M ++   P+   Y TL+DG  ++     A +I+  + E+    DI++YN 
Sbjct: 537 LSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNA 596

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +KG C    M++A   ++     G +P   T+  L+      G
Sbjct: 597 MIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 17/393 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           Q ++A      + E+ + PD   Y  +I+GL K   L  A  +  EM E+ V+ +   Y 
Sbjct: 501 QVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYT 560

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LIDGF +      A++I+E  + E   Y ++V YN MI G CK G  +E +     M+K
Sbjct: 561 TLIDGFIRSDKLSDARKIFE-FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRK 619

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D FTY + I G  K G+++ A R   +M++     + VTY ++I G+C  G    
Sbjct: 620 VGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDS 679

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L+  M  +G   NVV Y +LI  L +  K  +A + +E +   +C+ +  T   L+N
Sbjct: 680 AEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVN 739

Query: 354 GL--CKNGYLNKAIQILNEVEEGGEGRLADA-ASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           GL  C+ G +N      ++  +  +  L D    L++  D    +++AY  N+++    +
Sbjct: 740 GLTNCRYGMINSNCSDTDQAHK--KSALLDVFKGLIS--DGLDPRISAY--NAIIFSLCR 793

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            + L  A+ L ++MS KGC P  V++ +L+ G   V + G+  S +    ++     +  
Sbjct: 794 HNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEFEIICK 853

Query: 471 YSLLINGLCQSK---KIDMALKLCC---QFLQK 497
           Y  L+N    S    ++   L+L     QFLQ+
Sbjct: 854 YMTLLNQHVMSPVRDEVSRVLQLYAEEFQFLQQ 886


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 245/490 (50%), Gaps = 24/490 (4%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           ++ +  +++ LVK      A++   +M  + ++ ++  +NILI+ F   G    A  +  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           + + +   +P+ VT   +I GLC  G+  E L   D +       D  +Y + I+GLCK 
Sbjct: 124 K-IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKT 182

Query: 255 GNVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVV 311
           G    A +V R++   G+ V  + V YN +ID  C+   +    +L  E++ ++   +VV
Sbjct: 183 GETRAALQVLRKI--DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G L  G++ EA+ ++  +  KN   D  T  +L++GLCK              
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCK-------------- 286

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG +  A +++  M K G   N  T NSLM+G+    +   A F+F  M+R+G +P
Sbjct: 287 ----EGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SY+ +INGLCK +   EA +  KEM  K   P+ +TY+ LI+GL +  +I  A  L 
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y+ L+  LC   +V+ A+ L + +K +   PN+ TY  L+DGL K 
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A  ++  +L +    D+  YN+ + GLC      +A   ++     G +P  +T+
Sbjct: 463 GRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTY 522

Query: 612 HILVRAVMNN 621
             LVRA+  N
Sbjct: 523 ETLVRALFEN 532



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 222/421 (52%), Gaps = 20/421 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +  +A  F + +  KG   D  SYGT+INGL K+G+   AL V  ++    V+ N
Sbjct: 144 LCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPN 203

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +ID   K    + A ++   ++++  ++P+VVTY  +I G    GR  E + ++
Sbjct: 204 VVMYNTIIDSLCKDKLVIHASDLCSEMIVK-RIFPDVVTYTTLIYGCLIVGRLKEAVGLF 262

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M     + D +T+   + GLCK G ++ A  V   M++ G+  + VTYN+++DG+   
Sbjct: 263 NQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLV 322

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   ++  M R+G   +V SY+I+I GL +   VDEA+++++ +  K+   ++ T+
Sbjct: 323 KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTY 382

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GL K                   GR++DA  LVN M   G   +  T +SL++  
Sbjct: 383 NSLIDGLLK------------------YGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +++ AI L  ++  +G  P + +Y  L++GLCK  R  +A +  +++L KG+  D+
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDV 484

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y++++NGLC+    D AL L  +    G  PD   Y  L+  L    K + A++L   
Sbjct: 485 KMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLRE 544

Query: 529 M 529
           M
Sbjct: 545 M 545



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 243/494 (49%), Gaps = 55/494 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN-------------------------- 143
           L +   F  A  F   +  K ++PD++++  +IN                          
Sbjct: 74  LVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPD 133

Query: 144 ---------GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                    GL  +G +  AL   D++  +G   + V Y  LI+G  K G+   A ++  
Sbjct: 134 TVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVL- 192

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R +    V PNVV YN +I+ LCK        ++   M       D  TY + I+G    
Sbjct: 193 RKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIV 252

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G ++ A  ++ +M+   I  D  T+N ++DG C+ G++K+   +  VM ++G   N+V+Y
Sbjct: 253 GRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTY 312

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+ G     + ++A  ++  +  +    D  ++ ++INGLCK   +++A+ +  E   
Sbjct: 313 NSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE--- 369

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                          M       N  T NSL++G ++  ++ +A  L  EM  +G    V
Sbjct: 370 ---------------MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++Y++L++ LCK  +  +A + + ++ ++G +P++ TY++L++GLC++ ++  A  +   
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L KG+  DV MYN++++GLC  G  ++AL L S M+   C+P+ VTY TL+  LF+   
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534

Query: 554 CDKALEIWNHILEE 567
            DKA+++   ++ +
Sbjct: 535 NDKAVKLLREMIVQ 548



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 227/471 (48%), Gaps = 21/471 (4%)

Query: 154 ALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           A++ F+ +   R     +  +N ++    K   +  A    +++ ++  + P++ T+N++
Sbjct: 47  AVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELK-QIQPDLFTFNIL 105

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           IN  C  G  +    +  ++ K     D+ T  + I GLC  G V  A   + +++  G 
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
            +D V+Y  +I+G C+ G+ +   + L ++ G     NVV YN +I  L ++  V  A  
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +   +  K    D  T+  LI G                      GRL +A  L N+M  
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLI------------------VGRLKEAVGLFNQMLL 267

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
              K + YT N L++G  +  +++ A  +   M ++G    +V+YN+L++G   V++  +
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A      M  +G  PD+ +YS++INGLC++K +D A+ L  +   K   P+   YN LI 
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL   G++ DA  L + M  R    +++TY++L+D L K    DKA+ +   I ++ ++P
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +I +Y I + GLC   R+ DA     D L +G       ++++V  +   G
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEG 498



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 47/392 (11%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           +++ I+  L   KLV+H S +          C E +         K   PD    V    
Sbjct: 206 MYNTIIDSLCKDKLVIHASDL----------CSEMIV--------KRIFPD----VVTYT 243

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
             I+GC   I+ R    ++A    N +  K +KPDVY++  +++GL K G++  A  V  
Sbjct: 244 TLIYGCL--IVGR---LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLA 298

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M ++GV++N+V YN L+DG+F      +A  ++  +     V P+V +Y++MINGLCK 
Sbjct: 299 VMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA-RRGVTPDVQSYSIMINGLCKT 357

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
              DE + ++  M       ++ TY S I GL K G +  A  +  EM   G   D +TY
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           ++++D  C+  ++ +   L   +  +G   N+ +Y IL+ GL +NG++ +A ++++ L  
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K  + D   + V++NGLCK                  EG   +A SLV++M+ +GC  +A
Sbjct: 478 KGYHLDVKMYNVMVNGLCK------------------EGLFDEALSLVSKMEDNGCIPDA 519

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
            T  +L+    +  K + A+ L +EM  +G +
Sbjct: 520 VTYETLVRALFENDKNDKAVKLLREMIVQGSA 551



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 519 VEDALQLYSN-MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           V+DA+  +++ +  RN V  +  +N ++  L K      A+     +  ++++PD+ ++N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I +   C    ++ AF  L      G  P T+T   L++ +  NG
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 246/509 (48%), Gaps = 20/509 (3%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A    N +      P +  +  ++  + +       L+++ +M   G+  N    NIL
Sbjct: 36  DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I+ F        A  +    +++    P+  T+  +I GLC  G+  E L+++D+M    
Sbjct: 96  INSFCHLNRLGFAFSVLGD-ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + D  TY + I+GLCK GN   A R  R M +       V Y+ +ID  C+  ++ E  
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 297 ELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L+  M  KG   N  +Y+ LI GL   G   EAI ++  +  +    D  T   L++ L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK                  EG +  A  +V+ M +   K +  T NSLM+G    S++ 
Sbjct: 275 CK------------------EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             + +F  M RKGC P+V+SY TLING CK++   +A    +EM ++G  PD +TY+ LI
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +GLC   ++  A+ L  + +  G  PD+  Y IL   LC   ++ +A+ L   ++  N  
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD 436

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P++  Y+ +MDG+ + G+ + A ++++ +  + L PD+ +Y I + GLC    +++A + 
Sbjct: 437 PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496

Query: 596 LNDALCRGILPTTITWHILVRAVMNNGAS 624
             +    G  P   T++++ R  + N  +
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNET 525



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 266/545 (48%), Gaps = 32/545 (5%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LF+ +LR +  P  +V  S++L  I   K Y      LS+ +      +P     +   +
Sbjct: 41  LFNRMLR-MRPPPSIVDFSKLLTSITRMKHY---STVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N          C   +   A   L  + + G +P   ++ T+I GL   G +  AL +FD
Sbjct: 97  NS--------FCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +M   G + +V+ Y  LI+G  K G+   A   + R + + +  P VV Y+ +I+ LCK 
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR-FLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            +  E L ++  M       ++FTY S IHGLC  G+ + A R++  M+   I  D +T+
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N ++D  C+ G + +   + +VM +     +VV+YN L+ G     ++ + +++++ +  
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K C     ++  LING CK       IQI+++           A  L   M + G   + 
Sbjct: 328 KGCVPSVISYTTLINGYCK-------IQIMDK-----------AMGLFEEMSQQGLIPDT 369

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T N+L++G     +L +AI LF EM   G  P +V+Y  L + LCK  R  EA   +K 
Sbjct: 370 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           +      PD+  YS++++G+C++ +++ A  L  +   KG  PDV  Y I+I+GLC  G 
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + +A +L+  M +  C PN  TYN +  G  +  +  +A++++  +L      D+ +  +
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549

Query: 579 TLKGL 583
            ++ L
Sbjct: 550 LVEML 554



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 224/434 (51%), Gaps = 19/434 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A +  + +  +G +PDV +YGT+INGL K G+   A+     M +R     
Sbjct: 134 LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPT 193

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +ID   K      A  ++  ++ +  + PN  TY+ +I+GLC  G + E + ++
Sbjct: 194 VVVYSTIIDSLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLIHGLCILGHWKEAIRLF 252

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M   +   D  T+ + +  LCK G V  A  V   M++S +  D VTYN+++DG C  
Sbjct: 253 YAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLR 312

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   +++ M RKGC+ +V+SY  LI G  +   +D+A+ ++E + ++    D+ T+
Sbjct: 313 SEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTY 372

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GLC  G L  AI + +E+   G+                  RLA+A  L+  ++ 
Sbjct: 373 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 432

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                + +  + +M+G  +A +LE A  LF ++S KG  P V +Y  +INGLC+     E
Sbjct: 433 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 492

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     EM E G  P+  TY+L+  G  ++ +   A++L  + L +GF+ DV+   +L+ 
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 512 GLCSAGKVEDALQL 525
            L   G  +   Q+
Sbjct: 553 MLSDDGLDQSVKQI 566



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 107/210 (50%)

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           +  + +++A+ LF  M R    P++V ++ L+  + +++ +    S  K+M   G   + 
Sbjct: 30  LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            T ++LIN  C   ++  A  +    L+ G+ P    +  LI GLC  GK+ +ALQL+  
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P+++TY TL++GL K G+   A+     + +   RP ++ Y+  +  LC   +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +++A    +D L +GI P   T+  L+  +
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGL 239


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 264/534 (49%), Gaps = 38/534 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K   E+A      L + G+ P+V++Y  +I+ L K+     A  +F EM  RG+E N
Sbjct: 336 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 395

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            V Y ILI    K+G         D MR K I      + +VYP    YN +ING CK G
Sbjct: 396 EVTYAILIHALCKRGMIEDALCLFDKMRDKGI------KVTVYP----YNSLINGYCKQG 445

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D    +   M K      + +Y   I GLC+ G++     ++REM E GI  +  T+ 
Sbjct: 446 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 505

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+I+GFC+  K+ E   L++ M     + N V++N++I G    G + +A  +++ + E 
Sbjct: 506 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 565

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADA 382
               D+ T+  LI+GLC    ++KA + + ++E                    EGR  + 
Sbjct: 566 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 625

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G KL+  +   ++   ++    E +  LF+EM  +G  P  + Y  +I+ 
Sbjct: 626 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 685

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K E   +A +   +M+  G+ P+ +T+++LIN LC+S  +  A  LC + L     P+
Sbjct: 686 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 745

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN  +    + G +E A  L+S M + + + ++V++N L+ GL K G   +A+++ +
Sbjct: 746 KFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKAGKIQEAIDLMS 804

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            I E    PD ISY+  +  LC    ++ AFE  N+ L +G+ P  + ++I +R
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 254/522 (48%), Gaps = 65/522 (12%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P +V  ++ I A  K  M + AL +F +M +      ++   + I   C++   ++A+  
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + ++GL P   SY  +I GL ++GDL   + +  EM ERG+  N   +  LI+GF K
Sbjct: 454 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 513

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  ++++++ +++V PN VT+NVMI G C  G   +  +++D+M +   + D++
Sbjct: 514 DKKMDEAARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 572

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC    V  A     ++  S   ++  +  A++ GF R G+  E + LW+ M
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632

Query: 303 GRKGC-LNVVSYNILI----------------RGLLENG-KVD----------------- 327
             +G  L++VS+ I++                R + E G K D                 
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692

Query: 328 -EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A++ W+ +     + ++ TH VLIN LCK+GYL  A  +  E+  G            
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----------- 741

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                     N +T N  ++ F     +E A  L   M  +G   ++VS+N LI GLCK 
Sbjct: 742 -------VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 793

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA   + ++ E G+ PD I+YS +I+ LC+   I+ A +L  + L KG  PDV  Y
Sbjct: 794 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 853

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           NI I      G+ + AL +Y+NM +    PN  TY  L+ G+
Sbjct: 854 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 241/551 (43%), Gaps = 59/551 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + + + G+  D Y Y   I    +S +L GA  +   M   GV+ +
Sbjct: 196 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 255

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWE--RLVMETSVYPNVVTYNVMINGLCKCGRFD---- 223
            V YN+L+ G  K    MR +E  E   +++   V  + VTY  ++ G C+    +    
Sbjct: 256 AVPYNVLMYGLCKN---MRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 312

Query: 224 ---------------ECLEMWDRMKKNEREKDSFT----------------YCSFIHGLC 252
                           C  M D ++K E  +++F+                Y + I  LC
Sbjct: 313 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K    + A+R+++EM   G+  + VTY  +I   C+ G I++   L++ M  KG  + V 
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G  + G +D A  +   + ++     + ++  LI GLC+NG L+  +++  E+
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
            E                   G   N YT  +L+NGF +  K++ A  LF +M      P
Sbjct: 493 AE------------------RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V++N +I G C V    +A+    +M+E G KPD  TY  LI+GLC +  +  A +  
Sbjct: 535 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 594

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
                     +      L++G    G+  +   L+  M  R    +LV++  ++    K 
Sbjct: 595 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 654

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            D +K+  ++  + E+ ++PD I Y   +  L     M  A    +  +  G  P T+T 
Sbjct: 655 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTH 714

Query: 612 HILVRAVMNNG 622
            +L+  +  +G
Sbjct: 715 TVLINNLCKSG 725



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 234/507 (46%), Gaps = 19/507 (3%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+   ++  LVK      A  +FD+M + GV  +   Y   I  + +  +   A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           + +  R+  E  V  + V YNV++ GLCK  R  E +E+ + M       D  TY + ++
Sbjct: 241 RGLVVRMESE-GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C+   +E A R+  +M+  G        + MID   +   ++E F L   +G  G + 
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +YN LI  L +N + D+A  +++ +  +    +  T+ +LI+ LCK G +  A+ + 
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +++ + G                 +G L  A  L++ M K G    A + + L+ G  + 
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L + + L +EM+ +G +    ++  LING CK ++  EA     +M++    P+ +T+
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +++I G C    I  A +L  Q ++ G  PD   Y  LI GLC    V  A +  ++++ 
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              V N  +   L+ G F+ G   +   +W+ +    ++ D++S+ I +           
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659

Query: 592 AFEFLNDALCRGILPTTITWHILVRAV 618
           +     +   +G+ P  I +  ++ A+
Sbjct: 660 SCVLFREMKEQGVKPDDIFYTCMIDAL 686



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 19/404 (4%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +T    +  L K      A  ++ +M++SG+ +D   Y A I  +C +  +     L 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G   + V YN+L+ GL +N +V EA+ +  ++      AD  T+  L+ G C+ 
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 359 GYLNKAIQILNE----------------VEEGGEGRLADAA-SLVNRMDKHGCKLNAYTC 401
             L  A++I ++                ++E  +  L + A SL  ++   G   N +  
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L++   +  + ++A  LFKEM+ +G  P  V+Y  LI+ LCK     +A     +M +
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG K  +  Y+ LING C+   +D A  L    +++G TP    Y+ LI GLC  G +  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
            ++L+  M +R    N  T+  L++G  K    D+A  +++ +++  + P+ +++N+ ++
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
           G C    +  AF+  +  +  G+ P   T+  L+  + + +G S
Sbjct: 545 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 191/418 (45%), Gaps = 62/418 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  + K+   D+A  +F +M       NE+ F       C      KA +  + + E 
Sbjct: 506 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 565

Query: 130 GLKPDVYSYGTVINGL-VKSG---------DLLGALAV---------------------- 157
           GLKPD Y+Y ++I+GL + SG         DL  + AV                      
Sbjct: 566 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 625

Query: 158 ---FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
              +DEM  RGV+ ++V + I++    K+ D  ++  ++ R + E  V P+ + Y  MI+
Sbjct: 626 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF-REMKEQGVKPDDIFYTCMID 684

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            L K     + L  WD+M  +    ++ T+   I+ LCK+G +  AE + +EM+   +  
Sbjct: 685 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 744

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
           +  TYN  +D F   G +++  +L   M +    ++VS+NILI+GL + GK+ EAI +  
Sbjct: 745 NKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMS 804

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            + E   + D  ++  +I+ LCK G +NKA ++ NE                  M   G 
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNE------------------MLYKGL 846

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           K +    N  +       + + A+ ++  M R G  P   +Y  L++G+  +   G+A
Sbjct: 847 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQA 904



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  +N YT + ++   ++  +   A  LF +M + G       Y   I   C+      A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M  +G K   + Y++L+ GLC++ ++  A+++    +  G T D   Y  L++G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C   ++E AL++  +M +   VP+    + ++D L K    ++A  +   + +  + P+
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +YN  +  LC   R  DA     +   RG+ P  +T+ IL+ A+   G
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 242/465 (52%), Gaps = 28/465 (6%)

Query: 109 ILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ILC K        R  +KA R +  L + G KPDV++Y  VI+G  K+  +  A  V D 
Sbjct: 11  ILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDR 69

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  +G   +VV +NI+I  F  KG    A +++E L+ + +  P ++TY ++I      G
Sbjct: 70  MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE L++ D M     E D+FTY     GLCK G V+ A    R +   G   D +TYN
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++      GK  E  +    +  +GC  NVV+Y+ILI  L  +GK++E++++ ++++EK
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D+  +  LI   C+ G L+ AI+ L+ +    +G L D   +VN            
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI--CDGFLPD---IVNY----------- 293

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N++M    +    ++A+ +F ++   GC P V SYNT+++ L        A   + +M
Sbjct: 294 --NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           L KG  PD+ITY+ LI+ LC+   +D A+ L    L   F P++  Y  ++ GLC A ++
Sbjct: 352 LSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRI 411

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +DA+++ + M +  C PN  TY  L++G+  +G   +A+E+ N +
Sbjct: 412 DDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 213/459 (46%), Gaps = 56/459 (12%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V+    +I G       D+   +   ++K+ +  D F Y + I G CKA  +E A+ V
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTV 66

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGC-LNVVSYNILIRGLL 321
              M   G   D VT+N MI  FC  GKI    +++E ++    C   +++Y ILI   +
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G +DEA+ + + +  +    D+ T+ V+  GLCK G +++A +               
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE--------------- 171

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
               V  ++  GCK +  T N L+   +   K +       E+  +GC P VV+Y+ LI+
Sbjct: 172 ---FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS 228

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LC+  +  E+ + VK M EKG  PD   Y  LI   C+  K+DMA++     +  GF P
Sbjct: 229 SLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLP 288

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD-------- 553
           D+  YN ++  LC  G  + A++++  + +  C PN+ +YNT++  L+ +GD        
Sbjct: 289 DIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMI 348

Query: 554 ---------------------------CDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
                                       D+A+ +   +L  R +P+I+SY   L GLC  
Sbjct: 349 SQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKA 408

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            R+ DA E L   +  G  P   T+ +L+  +  +G+ T
Sbjct: 409 HRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRT 447



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 202/393 (51%), Gaps = 21/393 (5%)

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M   + + D       I G   + N++ A RV   + + G   D   YNA+I GFC+A +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 292 IKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHG 349
           I+    + + M RKG   +VV++NI+I      GK+D A+ ++E LL++ NC     T+ 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI      G +++A+++L+E                  M   G + + +T N +  G  
Sbjct: 120 ILIEAYILEGGIDEALKLLDE------------------MLSRGLEPDTFTYNVITRGLC 161

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A    + ++ +GC P V++YN L+  L    ++ E   ++ E+  +G +P+++
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TYS+LI+ LC+  KI+ ++ L     +KG TPD   Y+ LI   C  GK++ A++    M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                +P++V YNT+M  L K G+ D A+EI+  + E    P++ SYN  L  L S    
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             A   ++  L +GI P  IT++ L+  +  +G
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDG 374



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 28/179 (15%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           +++ A  KN   D A+++F +++E+                           G  P+V S
Sbjct: 295 TIMAALCKNGNGDHAVEIFGKLDEV---------------------------GCPPNVSS 327

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y T+++ L  SGD   AL +  +M  +G++ +V+ YN LI    + G    A  +   + 
Sbjct: 328 YNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM- 386

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +     PN+V+Y  ++ GLCK  R D+ +E+   M +N  + +  TY   I G+  +G+
Sbjct: 387 LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGS 445


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 253/509 (49%), Gaps = 61/509 (11%)

Query: 150 DLLGALA-VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           +++GA+  V+D M + GV  NV  YN+L+    +      A+++ + +  +    P+ VT
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARK-GCPPDDVT 196

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  +++ LCK  R DE  E+   M        + +Y + +  LC+   ++    V  +MV
Sbjct: 197 YATIVSVLCKLDRLDEATEVLAAMPP-----VAASYNAIVLALCREFRMQEVFSVVSDMV 251

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
             G+  + +TY  ++D FC+AG+++    +   M   GC  NVV++  L+RGL ++G+V 
Sbjct: 252 GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVH 311

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           +A+ +W  +  +     + ++ +LI GLC                    G L  A+S++N
Sbjct: 312 DALDMWRWMVAEGWAPSTVSYNILIRGLCS------------------VGDLKGASSILN 353

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M++HGC  N  T ++L++GF +A  L  AI ++ +MSR GC P VV Y  +++  CK  
Sbjct: 354 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 413

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
            F +A S + +ML +   P+ +T++ LI  LC  +++  AL +  +  + G  P+   YN
Sbjct: 414 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN 473

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LIHGL   G   DAL + + M+      +LVTYNT++ GL +T    +A+     ++ +
Sbjct: 474 ELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ 533

Query: 568 RLRPD-----------------------------------IISYNITLKGLCSCSRMSDA 592
            ++P+                                   I+ Y I +  LC+  ++ DA
Sbjct: 534 GIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDA 593

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNN 621
             +L   L  GI P T+TW++LVR V  N
Sbjct: 594 MTYLLKMLYEGIYPNTVTWNVLVRGVFRN 622



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 231/501 (46%), Gaps = 27/501 (5%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           +++ + G+ P+V++Y  ++  L ++  +  A  + DEM  +G   + V Y  ++    K 
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 207

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                A E+        ++ P   +YN ++  LC+  R  E   +   M     + +  T
Sbjct: 208 DRLDEATEVL------AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 261

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + +   CKAG +  A  +   MV +G   + VT+ A++ G    G++ +  ++W  M 
Sbjct: 262 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 321

Query: 304 RKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +G   + VSYNILIRGL   G +  A SI   + +  C  +  T+  LI+G  K G L 
Sbjct: 322 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 381

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            AI I N++   G                 +     A SL+++M    C  N  T N+L+
Sbjct: 382 GAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLI 441

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
                  ++  A+ +F EM R GC P   +YN LI+GL +    G+A   V EM   G +
Sbjct: 442 RSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIE 501

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
             ++TY+ +++GLCQ++    A+    + + +G  P+   ++ +IH  C  G+V  A  +
Sbjct: 502 LSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM 561

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL-- 583
              M   NC  N++ Y  LM  L        A+     +L E + P+ +++N+ ++G+  
Sbjct: 562 LGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 621

Query: 584 -CSCSRMSDAFEFLNDALCRG 603
              C   SD  + +   L  G
Sbjct: 622 NLGCIEPSDFIQHITMNLSEG 642



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 195/422 (46%), Gaps = 24/422 (5%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V+PNV TYN+++  LC+  R     +M D M +     D  TY + +  LCK   ++ A 
Sbjct: 155 VHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEAT 214

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGL 320
            V   M        A +YNA++   CR  +++E F +  +++GR    NV++Y  ++   
Sbjct: 215 EVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAF 269

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G++  A +I   +    C  +  T   L+ GL                    +GR+ 
Sbjct: 270 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD------------------DGRVH 311

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  +   M   G   +  + N L+ G      L+ A  +   M + GC P V +Y+TLI
Sbjct: 312 DALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 371

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G  K    G A S   +M   G KP+++ Y+ +++  C+    + A  L  + L +   
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   +N LI  LC   +V  AL ++  M++  CVPN  TYN L+ GLF+ G+C  AL +
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 491

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +    +   +++YN  + GLC      +A  F+   + +GI P   T+  ++ A   
Sbjct: 492 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 551

Query: 621 NG 622
            G
Sbjct: 552 EG 553



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 232/498 (46%), Gaps = 25/498 (5%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SV 79
           A+ L     R+ G   +   ++ ++R L     V    ++L+ +  + C  P+DV   ++
Sbjct: 142 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCP-PDDVTYATI 200

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           +    K    D+A +V   M  +      I   LCR+ + ++    ++ +  +GL+P+V 
Sbjct: 201 VSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+++   K+G+L  A A+   M   G   NVV +  L+ G F  G    A ++W  +
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V E    P+ V+YN++I GLC  G       + + M+++    +  TY + I G  KAG+
Sbjct: 321 VAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           + GA  ++ +M  SG   + V Y  M+D FC+     +   L + M  + C  N V++N 
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LIR L +  +V  A+ ++  +R   C  +  T+  LI+GL +                  
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR------------------ 481

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           EG   DA  +V  M  HG +L+  T N++++G  Q      A+    +M  +G  P   +
Sbjct: 482 EGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFT 541

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           ++ +I+  CK      A   +  M       +++ Y++L+  LC   K+  A+    + L
Sbjct: 542 FSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKML 601

Query: 496 QKGFTPDVTMYNILIHGL 513
            +G  P+   +N+L+ G+
Sbjct: 602 YEGIYPNTVTWNVLVRGV 619



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 5/241 (2%)

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
           GE  +     + + M K G   N +T N L+    Q +++  A  +  EM+RKGC P  V
Sbjct: 136 GENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 195

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y T+++ LCK++R  EA   +  M      P   +Y+ ++  LC+  ++     +    
Sbjct: 196 TYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDM 250

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + +G  P+V  Y  ++   C AG++  A  + + M    C PN+VT+  L+ GLF  G  
Sbjct: 251 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 310

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             AL++W  ++ E   P  +SYNI ++GLCS   +  A   LN     G  P   T+  L
Sbjct: 311 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 370

Query: 615 V 615
           +
Sbjct: 371 I 371



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 30/209 (14%)

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD- 502
           C     G        M + G  P++ TY+LL+  LCQ+ ++  A K+  +  +KG  PD 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 503 -----------------------------VTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
                                           YN ++  LC   ++++   + S+M  R 
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN++TY T++D   K G+   A  I   ++     P+++++   ++GL    R+ DA 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           +     +  G  P+T++++IL+R + + G
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVG 343


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 243/473 (51%), Gaps = 21/473 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           IF       C  ++  +A      + EKG  P++ +   +++  +K      A  ++ EM
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCG 220
           F   + +++  +NI+I+   K+G   +AKE      MET  V PNVVTYN +I+G C  G
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGH--METLGVKPNVVTYNTIIHGHCLRG 265

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           +F     ++  MK    E D +TY SFI GLCK G +E A  +  +M+E G+  +AVTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+IDG+C  G + + +   + M  KG + ++V+YN+ I  L   G++ +A ++ + +REK
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ TH +LING C+ G   +A  +L+E+   G                   R+ +A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            +L +++ + G   +    N+L++G      ++ A  L KEM      P  ++YNTL+ G
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+  +  EA   + EM  +G KPD I+Y+ LI+G  +   +  A ++  + +  GF P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +  YN LI GLC   + E A +L   M  +   P+  TY ++++ +    D +
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 232/469 (49%), Gaps = 26/469 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE---RLVMETSVYPNVVTYN 210
           AL  F  + E+G   N+   N ++  F K      A  ++    R+ + +S+Y    T+N
Sbjct: 165 ALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLY----TFN 220

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           +MIN LCK G+  +  E    M+    + +  TY + IHG C  G  + A  +++ M + 
Sbjct: 221 IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK 280

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G+  D  TYN+ I G C+ G+++E   L   M   G + N V+YN LI G    G +D+A
Sbjct: 281 GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            +  + +  K   A   T+ + I+ L                    EGR+ DA +++  M
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFM------------------EGRMGDADNMIKEM 382

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G   +A T N L+NG+ +    + A  L  EM  KG  PT+V+Y +LI  L K  R 
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA +   ++ ++G  PD+I ++ LI+G C +  ID A +L  +       PD   YN L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + G C  GKVE+A QL   MK+R   P+ ++YNTL+ G  K GD   A  + + ++    
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            P I++YN  ++GLC       A E L + + +GI P   T+  ++ A+
Sbjct: 563 DPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 227/470 (48%), Gaps = 23/470 (4%)

Query: 156 AVFDEMF---ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            +FDE+    +R      + +++L+  + +      A E +  L+ E    PN+ T N M
Sbjct: 129 TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECF-YLIKEKGFVPNIETCNQM 187

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++   K  R      ++  M +       +T+   I+ LCK G ++ A+     M   G+
Sbjct: 188 LSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV 247

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             + VTYN +I G C  GK +    +++ M  KG   +  +YN  I GL + G+++EA  
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +   + E     ++ T+  LI+G C  G L+KA    +E+   G       ASLV     
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG-----IMASLV----- 357

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                   T N  ++      ++ +A  + KEM  KG  P  V++N LING C+      
Sbjct: 358 --------TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+  + EM+ KG +P ++TY+ LI  L +  ++  A  L  +  Q+G  PD+ ++N LI 
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C+ G ++ A QL   M     +P+ +TYNTLM G  + G  ++A ++ + +    ++P
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           D ISYN  + G      M DAF   ++ +  G  PT +T++ L++ +  N
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN 579



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 98/191 (51%)

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           T + ++ L+   C++++  EA      + EKG+ P++ T + +++   +  +  MA  L 
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  +      +  +NI+I+ LC  GK++ A +   +M+     PN+VTYNT++ G    
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   +A  I+  + ++ L PD  +YN  + GLC   R+ +A   +   L  G++P  +T+
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 612 HILVRAVMNNG 622
           + L+    N G
Sbjct: 325 NALIDGYCNKG 335



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 9/190 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I   GK +   +A  +F ++ +        +F       C     ++A + L  +   
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + PD  +Y T++ G  + G +  A  + DEM  RG++ + + YN LI G+ K+GD   A
Sbjct: 491 KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDA 550

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + + + M T   P ++TYN +I GLCK    +   E+   M       D  TY S I 
Sbjct: 551 FRVRDEM-MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIE 609

Query: 250 GLCKAGNVEG 259
            +    ++EG
Sbjct: 610 AMETVDDLEG 619


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 264/534 (49%), Gaps = 38/534 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K   E+A      L + G+ P+V++Y  +I+ L K+     A  +F EM  RG+E N
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            V Y ILI    K+G         D MR K I      + +VYP    YN +ING CK G
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGI------KVTVYP----YNSLINGYCKQG 422

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D    +   M K      + +Y   I GLC+ G++     ++REM E GI  +  T+ 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 482

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+I+GFC+  K+ E   L++ M     + N V++N++I G    G + +A  +++ + E 
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADA 382
               D+ T+  LI+GLC    ++KA + + ++E                    EGR  + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 602

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G KL+  +   ++   ++    E +  LF+EM  +G  P  + Y  +I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K E   +A +   +M+  G+ P+ +T+++LIN LC+S  +  A  LC + L     P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN  +    + G +E A  L+S M + + + ++V++N L+ GL K G   +A+++ +
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            I E    PD ISY+  +  LC    ++ AFE  N+ L +G+ P  + ++I +R
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 254/522 (48%), Gaps = 65/522 (12%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P +V  ++ I A  K  M + AL +F +M +      ++   + I   C++   ++A+  
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + ++GL P   SY  +I GL ++GDL   + +  EM ERG+  N   +  LI+GF K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  ++++++ +++V PN VT+NVMI G C  G   +  +++D+M +   + D++
Sbjct: 491 DKKMDEAARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC    V  A     ++  S   ++  +  A++ GF R G+  E + LW+ M
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 303 GRKGC-LNVVSYNILI----------------RGLLENG-KVD----------------- 327
             +G  L++VS+ I++                R + E G K D                 
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 328 -EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A++ W+ +     + ++ TH VLIN LCK+GYL  A  +  E+  G            
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----------- 718

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                     N +T N  ++ F     +E A  L   M  +G   ++VS+N LI GLCK 
Sbjct: 719 -------VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA   + ++ E G+ PD I+YS +I+ LC+   I+ A +L  + L KG  PDV  Y
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           NI I      G+ + AL +Y+NM +    PN  TY  L+ G+
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 240/549 (43%), Gaps = 55/549 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + + + G+  D Y Y   I    +S +L GA  +   M   GV+ +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD------ 223
            V YN+L+ G  K      A E+ + +++   V  + VTY  ++ G C+    +      
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 224 -------------ECLEMWDRMKKNEREKDSFT----------------YCSFIHGLCKA 254
                         C  M D ++K E  +++F+                Y + I  LCK 
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
              + A+R+++EM   G+  + VTY  +I   C+ G I++   L++ M  KG  + V  Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + G +D A  +   + ++     + ++  LI GLC+NG L+  +++  E+ E
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              G   N YT  +L+NGF +  K++ A  LF +M      P  
Sbjct: 472 ------------------RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V++N +I G C V    +A+    +M+E G KPD  TY  LI+GLC +  +  A +    
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                   +      L++G    G+  +   L+  M  R    +LV++  ++    K  D
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +K+  ++  + E+ ++PD I Y   +  L     M  A    +  +  G  P T+T  +
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693

Query: 614 LVRAVMNNG 622
           L+  +  +G
Sbjct: 694 LINNLCKSG 702



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 234/509 (45%), Gaps = 19/509 (3%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
             G+  + Y+   ++  LVK      A  +FD+M + GV  +   Y   I  + +  +  
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A+ +  R+  E  V  + V YNV++ GLCK  R  E +E+ + M       D  TY + 
Sbjct: 216 GARGLVVRMESE-GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           ++G C+   +E A R+  +M+  G        + MID   +   ++E F L   +G  G 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + NV +YN LI  L +N + D+A  +++ +  +    +  T+ +LI+ LCK G +  A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + +++ + G                 +G L  A  L++ M K G    A + + L+ G  
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L + + L +EM+ +G +    ++  LING CK ++  EA     +M++    P+ +
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T++++I G C    I  A +L  Q ++ G  PD   Y  LI GLC    V  A +  +++
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +    V N  +   L+ G F+ G   +   +W+ +    ++ D++S+ I +         
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAV 618
             +     +   +G+ P  I +  ++ A+
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDAL 663



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 19/404 (4%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +T    +  L K      A  ++ +M++SG+ +D   Y A I  +C +  +     L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G   + V YN+L+ GL +N +V EA+ +  ++      AD  T+  L+ G C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 359 GYLNKAIQILNE----------------VEEGGEGRLADAA-SLVNRMDKHGCKLNAYTC 401
             L  A++I ++                ++E  +  L + A SL  ++   G   N +  
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L++   +  + ++A  LFKEM+ +G  P  V+Y  LI+ LCK     +A     +M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG K  +  Y+ LING C+   +D A  L    +++G TP    Y+ LI GLC  G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
            ++L+  M +R    N  T+  L++G  K    D+A  +++ +++  + P+ +++N+ ++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
           G C    +  AF+  +  +  G+ P   T+  L+  + + +G S
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  +N YT + ++   ++  +   A  LF +M + G       Y   I   C+      A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M  +G K   + Y++L+ GLC++ ++  A+++    +  G T D   Y  L++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C   ++E AL++  +M +   VP+    + ++D L K    ++A  +   + +  + P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +YN  +  LC   R  DA     +   RG+ P  +T+ IL+ A+   G
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/634 (25%), Positives = 299/634 (47%), Gaps = 39/634 (6%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S+K ++ +L +  +P  A + F+S    P   H+    +H+L  L   + V  +  +  
Sbjct: 89  LSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFN 148

Query: 63  LIEIQKCYCPEDVALSVIQ-------------AYGKNSMPDKALDVFQRMNEIFGCEAGI 109
           L++ Q      +  L + +             A+GK       L+ +     I       
Sbjct: 149 LMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSG 208

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+   E  +R +     +GLKP + ++  ++    K  D     ++ +EM   G++ N
Sbjct: 209 LCRE-ALEMYRRMV----LEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN 263

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  Y I I    + G    A  I +R+  +    P+VVTY V+I+ LC  G+ D+ +E++
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRM-EDDGCGPDVVTYTVLIDALCTAGKLDDAMELF 322

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK +  + D  TY + +      G++   +  + EM   G   D +T+  +++  C+A
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I E F L +VM ++G L N+ +YN LI GLL   ++D+A+ ++  +        + T+
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            + I+   K+G  +KA++                     +M   G   N   CN+ +   
Sbjct: 443 ILFIDFYGKSGRSDKALETF------------------EKMKIRGIAPNIVACNASLYSL 484

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L  A  +F  +   G +P  V+YN ++    K  +  EA   + +M E   +PD+
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I  + LIN L ++ ++D A K+ C+       P V  YN LI GL   G+V+ A++L+++
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M    C PN +T+NT++D L K  + D AL++   +      PD++++N  + GL    R
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +SDA  +L   + + + P  +T   L+  V+ NG
Sbjct: 665 VSDAI-WLFHQMKKMLTPDCVTLCTLLPGVVKNG 697



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 168/647 (25%), Positives = 294/647 (45%), Gaps = 41/647 (6%)

Query: 2    VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            VI+   L+N L    N   A  L D   R+ G   + H ++ ++  L+    +     + 
Sbjct: 369  VITFTILVNALCKAGNIDEAFHLLD-VMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427

Query: 62   ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRK 113
              +E           +  I  YGK+   DKAL+ F++M        I  C A +  L   
Sbjct: 428  NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             +  +AK   N L   GL PD  +Y  ++    K+G +  A+ +  +M E   E +++  
Sbjct: 488  GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 174  NILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            N LI+  +K G   R  E W+    + +  + P VVTYN +I GL K G+    +E++  
Sbjct: 548  NSLINTLYKAG---RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 232  MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
            M  N    ++ T+ + +  LCK   V+ A ++  +M       D +T+N +I G     +
Sbjct: 605  MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 292  IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISI----------------WEL 335
            + +   L+  M +    + V+   L+ G+++NG +++A  I                WE 
Sbjct: 665  VSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWED 724

Query: 336  LREKNCNADSTTHGVLING------LCKNG-YLNKAIQILNEVEEGGEGRLADAASLVNR 388
            L         T   +L         +CK+G  L   I++L + ++     L   +  +  
Sbjct: 725  LMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQA----LVAQSVFIRF 780

Query: 389  MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
              + G K    + N L+ GF+     E A  LF EM   GC+P V +YN L++   K  +
Sbjct: 781  TKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGK 840

Query: 449  FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              E +   ++M+    KP+ IT++++I  L +S  +D AL L    +   F+P    Y  
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 509  LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
            L+ GL  +G++E+A +L+  M    C PN   YN L++G  KTGD + A E++  ++ E 
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 569  LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +RPD+ SY   +  LC   R+ DA  +       G+   +I +++++
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMI 1007



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 232/454 (51%), Gaps = 23/454 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L R  + ++A R +  + + G  PDV +Y  +I+ L  +G L  A+ +F +M     + 
Sbjct: 273 VLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP 332

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLE 227
           + V Y  ++D F   GD  R KE W    ME   Y P+V+T+ +++N LCK G  DE   
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSE--MEADGYAPDVITFTILVNALCKAGNIDEAFH 390

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M+K     +  TY + I GL +   ++ A  ++  M   G+   A TY   ID + 
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450

Query: 288 RAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           ++G+  +  E +E M  +G   N+V+ N  +  L E G++ EA  I+  L+      DS 
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +++    K G +++AI++L++                  M ++ C+ +    NSL+N
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSD------------------MSENQCEPDIIVINSLIN 552

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +A +++ A  +F  +     +PTVV+YNTLI GL K  +   A      M   G  P
Sbjct: 553 TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPP 612

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + IT++ +++ LC++ ++D+ALK+  +       PDV  +N +IHGL    +V DA+ L+
Sbjct: 613 NTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF 672

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
             MKK    P+ VT  TL+ G+ K G  + A +I
Sbjct: 673 HQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 249/530 (46%), Gaps = 36/530 (6%)

Query: 78   SVIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNS 125
            ++I   GK     +A+++F  M            N I  C    LC+  + + A + L  
Sbjct: 584  TLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC----LCKNDEVDLALKMLYK 639

Query: 126  LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
            +      PDV ++ T+I+GLV    +  A+ +F +M ++ +  + V    L+ G  K G 
Sbjct: 640  MTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGL 698

Query: 186  YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
               A +I E  V    VY +   +  ++ G+      ++ +   DR+      KD     
Sbjct: 699  MEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLM 758

Query: 246  SFIHGLCKAGNVEGAERVY-REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              I  LCK      A+ V+ R   E G+     +YN +I+GF      +  + L+  M  
Sbjct: 759  PIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKN 818

Query: 305  KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
             GC  +V +YN+L+    ++GK++E   ++E +   +C  ++ TH ++I  L K+  L+K
Sbjct: 819  AGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDK 878

Query: 364  AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            A+ +  ++  G                   GRL +A  L   M  +GC+ N    N L+N
Sbjct: 879  ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            GF +   +  A  LFK M R+G  P + SY +L+  LC+  R  +A  + +++ + G   
Sbjct: 939  GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998

Query: 467  DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            D I Y+L+I+GL +S +I+ AL L  +   +G  PD+  YN LI  L  AG VE A +LY
Sbjct: 999  DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLY 1058

Query: 527  SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
              ++     PN+ TYN L+ G   +G+ D A  ++  ++     P+  ++
Sbjct: 1059 EELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 278/604 (46%), Gaps = 73/604 (12%)

Query: 71   CPEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAK 120
             P+ V  +++ + Y K    D+A+++   M+E   CE  I         L +  + ++A 
Sbjct: 506  APDSVTYNMMMKCYSKAGQVDEAIELLSDMSE-NQCEPDIIVINSLINTLYKAGRVDEAW 564

Query: 121  RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
            +    L +  L P V +Y T+I GL K G +  A+ +F  M   G   N + +N ++D  
Sbjct: 565  KMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624

Query: 181  FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
             K  +   A ++  ++    +  P+V+T+N +I+GL    R  + + ++ +MKK     D
Sbjct: 625  CKNDEVDLALKMLYKMT-TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPD 682

Query: 241  SFTYCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGF------------- 286
              T C+ + G+ K G +E A ++  + V   G++VD   +  ++ G              
Sbjct: 683  CVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFG 742

Query: 287  --------CRAGKI-----------KECFELWEV-------MGRKGCLNVVSYNILIRGL 320
                    C+ G +           K+      V       +G K  L   SYN LI G 
Sbjct: 743  DRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLE--SYNFLIEGF 800

Query: 321  LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            L     + A +++  ++   C  D  T+ +L++   K+G +N+  +              
Sbjct: 801  LGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE-------------- 846

Query: 381  DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                L  +M    CK N  T N ++   ++++ L+ A+ LF ++     SPT  +Y  L+
Sbjct: 847  ----LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL 902

Query: 441  NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            +GL K  R  EA    +EM++ G +P+   Y++LING  ++  ++ A +L  + +++G  
Sbjct: 903  DGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIR 962

Query: 501  PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            PD+  Y  L+  LC AG+V+DAL  +  +K+     + + YN ++DGL ++   ++AL +
Sbjct: 963  PDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTL 1022

Query: 561  WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            ++ +    + PD+ +YN  +  L     +  A +   +    G+ P   T++ L+R    
Sbjct: 1023 YDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSM 1082

Query: 621  NGAS 624
            +G S
Sbjct: 1083 SGNS 1086



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 21/370 (5%)

Query: 109  ILCRKRQFEKAKR-FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +LC+ +Q   A+  F+    E G+KP + SY  +I G +   +   A  +F EM   G  
Sbjct: 763  VLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCA 822

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             +V  YN+L+D   K G      E++E+++  +S  PN +T+N++I  L K    D+ L+
Sbjct: 823  PDVFTYNLLLDAHGKSGKINELFELYEQMIC-SSCKPNTITHNIIIANLVKSNSLDKALD 881

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            ++  +   +      TY   + GL K+G +E A+ ++ EMV+ G   +   YN +I+GF 
Sbjct: 882  LFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            + G +    EL++ M R+G   ++ SY  L+  L E G+VD+A+  +E L++     DS 
Sbjct: 942  KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             + ++I+GL                  G   R+ +A +L + M   G   + +T NSL+ 
Sbjct: 1002 AYNLMIDGL------------------GRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
                A  +E A  L++E+   G  P V +YN LI G         AY+  K M+  G  P
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSP 1103

Query: 467  DMITYSLLIN 476
            +  T++ L N
Sbjct: 1104 NTGTFAQLPN 1113



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 157/337 (46%), Gaps = 20/337 (5%)

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           R G +   F L +    K  LN  +Y I+ +GL   G + +    +  +RE   + ++ +
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLN--TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYS 196

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+ L ++G   +A++                  +  RM   G K +  T ++LM  
Sbjct: 197 YNGLIHLLLQSGLCREALE------------------MYRRMVLEGLKPSLKTFSALMVA 238

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +    E    L +EM   G  P + +Y   I  L +  R  EA   +K M + G  PD
Sbjct: 239 TGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPD 298

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY++LI+ LC + K+D A++L  +       PD   Y  ++      G +    + +S
Sbjct: 299 VVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWS 358

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+     P+++T+  L++ L K G+ D+A  + + + ++ + P++ +YN  + GL   +
Sbjct: 359 EMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVN 418

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           R+ DA +  N+    G++PT  T+ + +     +G S
Sbjct: 419 RLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 274/595 (46%), Gaps = 80/595 (13%)

Query: 99  MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           M ++  C + +   CR  +  +A      ++E GL P+  SY T+IN L KSG ++ A  
Sbjct: 7   MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 66

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +  +M  RG+  ++V    ++DG FK G    A+E++E  +++ ++ PN VTY+ +++G 
Sbjct: 67  LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET-ILKLNLAPNCVTYSALLDGY 125

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G+ +    +  +M+K     +  T+ S I+G  K G +  A  V REMV+  +  + 
Sbjct: 126 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 185

Query: 277 VTYNAMIDG------------FC-----------------------RAGKIKECFELWEV 301
           + Y  +IDG            FC                       R G++ E   L   
Sbjct: 186 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 245

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KG   ++V+Y  LI G  + G    A+SI + ++EKN   D   +  LI GL + G 
Sbjct: 246 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 305

Query: 361 LNKAIQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA- 417
            +        +E G   + +  DA  ++N M  +G   NA T N L+ G  +   +E A 
Sbjct: 306 YDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 365

Query: 418 ------------------IFLFKEMSRK----------------GCSPTVVSYNTLINGL 443
                              FL K  SR                 G   ++  YNTLI   
Sbjct: 366 SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVF 425

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C++    +A   + EM+++G   D++TY+ LI G C    ++ ALK   Q    G  P++
Sbjct: 426 CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNI 485

Query: 504 TMYNILIHGLCSAG----KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           T YN L+ GL +AG     +E+  +L S M +R  VPN  TY+ L+ G  + G+  K + 
Sbjct: 486 TTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTII 545

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           +   ++ +   P + +YN+ +       +M +A E LND L +G +P + T+ IL
Sbjct: 546 LHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 241/514 (46%), Gaps = 40/514 (7%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PDV +  +++ G  + G L  A  +F EM+E G++ N V Y  +I+  FK G  M A
Sbjct: 5   GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  ++V+    + ++VT   +++GL K G+  E  E+++ + K     +  TY + + 
Sbjct: 65  FNLQSQMVVRGISF-DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 123

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCL 308
           G CK G +E AE V ++M +  +  + +T++++I+G+ + G + +  + L E++ R    
Sbjct: 124 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 183

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N + Y ILI G  + G+ D A    + ++ +     +    +L+N L +           
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR----------- 232

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   GR+ +A SL+  M   G   +     SL++G+ +      A+ + +EM  K 
Sbjct: 233 -------VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 285

Query: 429 CSPTVVSYNTLINGLCKVERFGEAY--------------------SFVKEMLEKGWKPDM 468
               VV+YN LI GL ++ ++   Y                      + EM   G  P+ 
Sbjct: 286 IRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNA 345

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY++LI GLC++  ++ A     + L   F P    +  L+     + K +  LQ++  
Sbjct: 346 VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEK 405

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +       +L  YNTL+    + G   KA  + + +++  +  D+++YN  ++G C+ S 
Sbjct: 406 LVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSH 465

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A +  +     GI P   T++ L+  + N G
Sbjct: 466 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 499



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 48/457 (10%)

Query: 66  IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           +Q+   P  +  ++ I  Y K    D A D  + M        N IF      L R  + 
Sbjct: 177 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 236

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A+  +  ++ KG+ PD+ +Y ++I+G  K G+ L AL++  EM E+ +  +VV YN L
Sbjct: 237 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 296

Query: 177 IDGFFKKGDYMRAKEIWERLV-------------------MET-SVYPNVVTYNVMINGL 216
           I G  + G Y   + +  R++                   M++  + PN VTYN++I GL
Sbjct: 297 IKGLLRLGKY-DPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGL 355

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G  ++     D M   E      T+   +    ++   +   +++ ++V SG+ +  
Sbjct: 356 CKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSL 415

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
             YN +I  FCR G  ++   + + M ++G   ++V+YN LIRG      V++A+  +  
Sbjct: 416 TVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 475

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +       + TT+  L+ GL   G + + ++                  LV+ M++ G  
Sbjct: 476 MFVDGIAPNITTYNTLLGGLSNAGLMEEMMEE--------------TEKLVSEMNERGLV 521

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            NA T + L++G+ +    +  I L  EM  KG  PT+ +YN LI+   K  +  EA   
Sbjct: 522 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 581

Query: 456 VKEMLEKGWKPDMITYSLLING---LCQSKKIDMALK 489
           + ++L KG  P+  TY +L  G   L    +ID +LK
Sbjct: 582 LNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLK 618



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 192/378 (50%), Gaps = 39/378 (10%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M+ +GI  D VT ++++ GFCR GK+ E   L+  M   G   N VSY  +I  L ++G+
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           V EA ++   +  +  + D  T   +++GL K                   G+  +A  +
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK------------------VGKTKEAEEV 102

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              + K     N  T ++L++G+ +  K+E A  + ++M ++   P V++++++ING  K
Sbjct: 103 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAK 162

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
                +A   ++EM+++   P+ I Y++LI+G  ++ + D+A   C +   +       +
Sbjct: 163 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 222

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           ++IL++ L   G++++A  L  +M  +   P++V Y +L+DG FK G+   AL I   + 
Sbjct: 223 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 282

Query: 566 EERLRPDIISYNITLKGLCS---------CSRM-----------SDAFEFLNDALCRGIL 605
           E+ +R D+++YN  +KGL           CSRM            DA + LN+    GI+
Sbjct: 283 EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIM 342

Query: 606 PTTITWHILVRAVMNNGA 623
           P  +T++IL+  +   GA
Sbjct: 343 PNAVTYNILIGGLCKTGA 360


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 267/542 (49%), Gaps = 38/542 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K   E+A      L + G+ P+V++Y  +I+ L K+     A  +F EM  RG+E N
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            V Y ILI    K+G         D MR K I      + +VYP    YN +ING CK G
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGI------KVTVYP----YNSLINGYCKQG 422

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D    +   M K      + +Y   I GLC+ G++     ++REM E GI  +  T+ 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 482

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+I+GFC+  K+ E   L++ M     + N V++N++I G    G + +A  +++ + E 
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADA 382
               D+ T+  LI+GLC    ++KA + + ++E                    EGR  + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 602

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G KL+  +   ++   ++    E +  LF+EM  +G  P  + Y  +I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K E   +A +   +M+  G+ P+ +T+++LIN LC+S  +  A  LC + L     P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN  +    + G +E A  L+S M + + + ++V++N L+ GL K G   +A+++ +
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I E    PD ISY+  +  LC    ++ AFE  N+ L +G+ P  + ++I +R    +G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 623 AS 624
            S
Sbjct: 842 ES 843



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 255/504 (50%), Gaps = 29/504 (5%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P +V  ++ I A  K  M + AL +F +M +      ++   + I   C++   ++A+  
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + ++GL P   SY  +I GL ++GDL   + +  EM ERG+  N   +  LI+GF K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  ++++++ +++V PN VT+NVMI G C  G   +  +++D+M +   + D++
Sbjct: 491 DKKMDEAARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC    V  A     ++  S   ++  +  A++ GF R G+  E + LW+ M
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             +G  L++VS+ I++   L+    +++  ++  ++E+    D   +  +I+ L K   +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 362 NKAIQILNE-VEEGGEGRLADAASLVNRMDKHG--------CK--------LNAYTCNSL 404
            +A+   ++ V +G          L+N + K G        CK         N +T N  
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++ F     +E A  L   M  +G   ++VS+N LI GLCK  +  EA   + ++ E G+
Sbjct: 730 LDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGF 788

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD I+YS +I+ LC+   I+ A +L  + L KG  PDV  YNI I      G+ + AL 
Sbjct: 789 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 848

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGL 548
           +Y+NM +    PN  TY  L+ G+
Sbjct: 849 IYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 240/549 (43%), Gaps = 55/549 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + + + G+  D Y Y   I    +S +L GA  +   M   GV+ +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD------ 223
            V YN+L+ G  K      A E+ + +++   V  + VTY  ++ G C+    +      
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRIT 291

Query: 224 -------------ECLEMWDRMKKNEREKDSFT----------------YCSFIHGLCKA 254
                         C  M D ++K E  +++F+                Y + I  LCK 
Sbjct: 292 HDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
              + A+R+++EM   G+  + VTY  +I   C+ G I++   L++ M  KG  + V  Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G  + G +D A  +   + ++     + ++  LI GLC+NG L+  +++  E+ E
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              G   N YT  +L+NGF +  K++ A  LF +M      P  
Sbjct: 472 ------------------RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V++N +I G C V    +A+    +M+E G KPD  TY  LI+GLC +  +  A +    
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                   +      L++G    G+  +   L+  M  R    +LV++  ++    K  D
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +K+  ++  + E+ ++PD I Y   +  L     M  A    +  +  G  P T+T  +
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693

Query: 614 LVRAVMNNG 622
           L+  +  +G
Sbjct: 694 LINNLCKSG 702



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 234/507 (46%), Gaps = 19/507 (3%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  + Y+   ++  LVK      A  +FD+M + GV  +   Y   I  + +  +   A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           + +  R+  E  V  + V YNV++ GLCK  R  E +E+ + M       D  TY + ++
Sbjct: 218 RGLVVRMESE-GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C+   +E A R+  +M+  G        + MID   +   ++E F L   +G  G + 
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +YN LI  L +N + D+A  +++ +  +    +  T+ +LI+ LCK G +  A+ + 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +++ + G                 +G L  A  L++ M K G    A + + L+ G  + 
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L + + L +EM+ +G +    ++  LING CK ++  EA     +M++    P+ +T+
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +++I G C    I  A +L  Q ++ G  PD   Y  LI GLC    V  A +  ++++ 
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              V N  +   L+ G F+ G   +   +W+ +    ++ D++S+ I +           
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 592 AFEFLNDALCRGILPTTITWHILVRAV 618
           +     +   +G+ P  I +  ++ A+
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDAL 663



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 19/404 (4%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +T    +  L K      A  ++ +M++SG+ +D   Y A I  +C +  +     L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G   + V YN+L+ GL +N +V EA+ +  ++      AD  T+  L+ G C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 359 GYLNKAIQILNE----------------VEEGGEGRLADAA-SLVNRMDKHGCKLNAYTC 401
             L  A++I ++                ++E  +  L + A SL  ++   G   N +  
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L++   +  + ++A  LFKEM+ +G  P  V+Y  LI+ LCK     +A     +M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG K  +  Y+ LING C+   +D A  L    +++G TP    Y+ LI GLC  G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
            ++L+  M +R    N  T+  L++G  K    D+A  +++ +++  + P+ +++N+ ++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
           G C    +  AF+  +  +  G+ P   T+  L+  + + +G S
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%)

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  +N YT + ++   ++  +   A  LF +M + G       Y   I   C+      A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M  +G K   + Y++L+ GLC++ ++  A+++    +  G T D   Y  L++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C   ++E AL++  +M +   VP+    + ++D L K    ++A  +   + +  + P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +YN  +  LC   R  DA     +   RG+ P  +T+ IL+ A+   G
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 260/502 (51%), Gaps = 28/502 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+D+FQ M       + +        +   +QF     F   +   G+  ++Y+   +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   +      A +V  ++ + G E +   +N LI+G   +     A  +  R+V E  
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV-ENG 165

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVTYN ++NG+CK G     L++  +M +   + D FTY + I  LC+ G ++ A 
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGL 320
            +++EM   GI    VTYN+++ G C+AGK  +  +L + M  RK   NV+++N+LI   
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
           ++ GK+ EA  +++ +  K  + ++ T+  L++G C                   + RL+
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM------------------QNRLS 327

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A ++++ M ++ C  +  T  SL+ G+ +  +++  + LF+++S++G     V+Y+ L+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            G C+  +   A    +EM+  G  PD++TY +L++GLC + K++ AL++     +    
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D+ MY I+I G+C  GKVEDA  L+ ++  +   PN++TY  ++ GL K G   +A  +
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507

Query: 561 WNHILEERLRPDIISYNITLKG 582
              + E+   P+  +YN  ++ 
Sbjct: 508 LRKMEEDGNEPNDCTYNTLIRA 529



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 242/471 (51%), Gaps = 20/471 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+ +F EM       ++V ++    G      +    +  +++ +   +  N+ T N+MI
Sbjct: 49  AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMEL-NGIAHNIYTLNIMI 107

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+C +      +  ++ K   E D+ T+ + I+GLC    V  A  +   MVE+G  
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            + VTYN++++G C++G      +L   M  +    +V +Y+ +I  L  +G +D AIS+
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  K   +   T+  L+ GLCK G  N  +Q+L +                  M   
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD------------------MTSR 269

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N  T N L++ F++  KL+ A  L+KEM  KG SP  ++YN+L++G C   R  EA
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + +  M+     PD++T++ LI G C+ K++D  +KL  +  ++G   +   Y+IL+ G
Sbjct: 330 NNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQG 389

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +GK+E A +L+  M     +P+++TY  L+DGL   G  +KALEI+  + + ++  D
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I+ Y I ++G+C   ++ DA+       C+G+ P  +T+ +++  +   G+
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 252/494 (51%), Gaps = 20/494 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +    +G+  +      L    +M   G+  N+   NI+I+ F +      A  +
Sbjct: 63  PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + VM+    P+  T+N +INGLC   +  E + +  RM +N  + +  TY S ++G+C
Sbjct: 123 LGK-VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGIC 181

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K+G+   A  + R+M E  +  D  TY+ +ID  CR G I     L++ M  KG   ++V
Sbjct: 182 KSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLV 241

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN L+ GL + GK ++ + + + +  +    +  T  VLI+   K              
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK-------------- 287

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+L +A  L   M   G   N  T NSLM+G+   ++L  A  +   M R  CSP
Sbjct: 288 ----EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP 343

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V++ +LI G CKV+R  E     +++ ++G   + +TYS+L+ G CQS K+++A +L 
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G  PDV  Y IL+ GLC  GK+E AL+++ +++K     ++V Y  +++G+ K 
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A  ++  +  + ++P++++Y + + GLC    +S+A   L      G  P   T+
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523

Query: 612 HILVRAVMNNGAST 625
           + L+RA + +G  T
Sbjct: 524 NTLIRAHLRDGDLT 537



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 222/423 (52%), Gaps = 22/423 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A   +  + E G +P+V +Y +++NG+ KSGD   AL +  +M ER V+ +
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEM 228
           V  Y+ +ID   + G    A  +++   MET  +  ++VTYN ++ GLCK G++++ +++
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKE--METKGIKSSLVTYNSLVGGLCKAGKWNDGVQL 262

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M   +   +  T+   I    K G ++ A  +Y+EM+  GI  + +TYN+++DG+C 
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM 322

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++ E   + ++M R  C  ++V++  LI+G  +  +VDE + ++  + ++   A++ T
Sbjct: 323 QNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +L+ G C++G L  A ++  E                  M   G   +  T   L++G
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQE------------------MVSLGVLPDVMTYGILLDG 424

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                KLE A+ +F+++ +   +  +V Y  +I G+CK  +  +A++    +  KG KP+
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 484

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+++I+GLC+   +  A  L  +  + G  P+   YN LI      G +  + +L  
Sbjct: 485 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIE 544

Query: 528 NMK 530
            MK
Sbjct: 545 EMK 547



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 204/399 (51%), Gaps = 40/399 (10%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I +  ++   D A+ +F+ M           +    G LC+  ++    + L  +  +
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+V ++  +I+  VK G L  A  ++ EM  +G+  N + YN L+DG+  +     A
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + + L++  +  P++VT+  +I G CK  R DE ++++ ++ K     ++ TY   + 
Sbjct: 330 NNMLD-LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCL 308
           G C++G +E AE +++EMV  G+  D +TY  ++DG C  GK+++  E++E + + K  L
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++V Y I+I G+ + GKV++A +++  L  K    +  T+ V+I+GLCK G L++A  +L
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            ++EE G                 +G L  +A L+  M   G   +A +   +++     
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID----- 563

Query: 412 SKLENAIFLFKEMSR-------KGCSPTVVSYNTLINGL 443
             L +A++ FKE  R       +G    ++ +NT+   L
Sbjct: 564 -MLSSAVWWFKEPRRSPGVKRFRGTQAYLMPFNTITASL 601


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 296/621 (47%), Gaps = 54/621 (8%)

Query: 3   ISAKRLLNL--LKAEKNPHTALALFD---SATREPGYAHSPHLFHHILRRLIDPKLVVHV 57
           ++AKRL     L+   NP T  + F+   S   E  +A +   +  ILR           
Sbjct: 7   LTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR----------- 55

Query: 58  SRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE 117
           +R+ ++I++       D A+ +     K S P  ++  F ++          + +  +FE
Sbjct: 56  NRLSDIIKV-------DDAVDLFGDMVK-SRPFPSIVEFNKL-------LSAVAKMNKFE 100

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
                   +   G+  D+Y+Y   IN   +   L  ALAV  +M + G E ++V  + L+
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           +G+        A  + +++V E    P+  T+  +I+GL    +  E + + D+M +   
Sbjct: 161 NGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D  TY + ++GLCK G+++ A  +  +M  + I  + V +N +ID  C+   ++   +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M  KG   NVV+YN LI  L   G+  +A  +   + EK  N +  T   LI+   
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K                  EG+L +A  L   M +     +  T N L+NGF   ++L+ 
Sbjct: 340 K------------------EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +FK M  K C P + +YNTLING CK +R  +     +EM ++G   + +TY+ +I 
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G  Q+   D A  +  Q +      D+  Y+IL+HGLCS GK++ AL ++  ++K     
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+  YNT+++G+ K G   K  E W+      ++PD+++YN  + GLCS   + +A +  
Sbjct: 502 NIFIYNTMIEGMCKAG---KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558

Query: 597 NDALCRGILPTTITWHILVRA 617
                 G LP + T++ L+RA
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRA 579



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 245/489 (50%), Gaps = 37/489 (7%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKG 130
           I  + + S    AL V  +M ++ G E  I+         C  ++   A   ++ + E G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            KPD +++ T+I+GL        A+A+ D+M +RG + ++V Y  +++G  K+GD   A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 191 EIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +  +  ME + +  NVV +N +I+ LCK    +  ++++  M+      +  TY S I+
Sbjct: 244 NLLNK--MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LC  G    A R+   M+E  I  + VT+NA+ID F + GK+ E  +L E M ++    
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           + ++YN+LI G   + ++DEA  +++ +  K+C  +  T+  LING CK           
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK--------- 412

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R+ D   L   M + G   N  T  +++ GF QA   ++A  +FK+M    
Sbjct: 413 ---------RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
               +++Y+ L++GLC   +   A    K + +   + ++  Y+ +I G+C++ K+  A 
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L C    K   PDV  YN +I GLCS   +++A  L+  MK+   +PN  TYNTL+   
Sbjct: 524 DLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580

Query: 549 FKTGDCDKA 557
            +  DCD+A
Sbjct: 581 LR--DCDRA 587



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 230/490 (46%), Gaps = 40/490 (8%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN     K    A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLF---LHNKASEAV 208

Query: 62  ELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            L++  +Q+   P+ V   +V+    K    D AL++  +M          IF      L
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  E A      +  KG++P+V +Y ++IN L   G    A  +   M E+ +  NV
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LID FFK+G  + A+++ E ++ + S+ P+ +TYN++ING C   R DE  +M+ 
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMI-QRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M   +   +  TY + I+G CK   VE    ++REM + G+  + VTY  +I GF +AG
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447

Query: 291 KIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                  +++ M   +   ++++Y+IL+ GL   GK+D A+ I++ L++     +   + 
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I G+CK G + +A  +   +                       K +  T N++++G  
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSL---------------------SIKPDVVTYNTMISGLC 546

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLING-LCKVERFGEAYSFVKEMLEKGWKPDM 468
               L+ A  LF++M   G  P   +YNTLI   L   +R   A   +KEM   G+  D 
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGFVGDA 605

Query: 469 ITYSLLINGL 478
            T SL+ N L
Sbjct: 606 STISLVTNML 615



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 210/416 (50%), Gaps = 24/416 (5%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +A   ++ + ++G +PD+ +YGTV+NGL K GD+  AL + ++M    ++ NVV +N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264

Query: 177 IDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           ID   K      A +++    MET  + PNVVTYN +IN LC  GR+ +   +   M + 
Sbjct: 265 IDSLCKYRHVEVAVDLFTE--METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           +   +  T+ + I    K G +  AE+++ EM++  I  D +TYN +I+GFC   ++ E 
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++++ M  K CL N+ +YN LI G  +  +V++ + ++  + ++    ++ T+  +I G
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442

Query: 355 LCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLN 397
             + G  + A  +  ++                      G+L  A  +   + K   +LN
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +  N+++ G  +A K+  A  LF  +S K   P VV+YNT+I+GLC      EA    +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFR 559

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           +M E G  P+  TY+ LI    +      + +L  +    GF  D +  +++ + L
Sbjct: 560 KMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 199/413 (48%), Gaps = 19/413 (4%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           ++ N L    + D+ ++++  M K+        +   +  + K    E    +  +M   
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           GI  D  TY+  I+ FCR  ++     +   M + G   ++V+ + L+ G   + ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +++ + + E     D+ T   LI+GL  +   NKA               ++A +LV++M
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLH---NKA---------------SEAVALVDQM 214

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + GC+ +  T  +++NG  +   ++ A+ L  +M        VV +NT+I+ LCK    
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A     EM  KG +P+++TY+ LIN LC   +   A +L    L+K   P+V  +N L
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I      GK+ +A +L+  M +R+  P+ +TYN L++G       D+A +++  ++ +  
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            P+I +YN  + G C C R+ D  E   +   RG++  T+T+  +++     G
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 27/332 (8%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL N+L+ + NP+  T  AL D+  +E     +  L   +++R IDP  + +   I 
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI- 370

Query: 62  ELIEIQKCYCPEDVALSVIQAY----GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE 117
                   +C  +      Q +     K+ +P+      Q  N +        C+ ++ E
Sbjct: 371 ------NGFCMHNRLDEAKQMFKFMVSKDCLPN-----IQTYNTLING----FCKCKRVE 415

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
                   + ++GL  +  +Y T+I G  ++GD   A  VF +M    V T+++ Y+IL+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G    G    A  I++ L  ++ +  N+  YN MI G+CK G+  E    WD       
Sbjct: 476 HGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSI 531

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D  TY + I GLC    ++ A+ ++R+M E G   ++ TYN +I    R        E
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           L + M   G +   S   L+  +L +G++D++
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 255/491 (51%), Gaps = 20/491 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P ++ +  ++  + K       L++  +M   G+  +V    I+I+ F        A  +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+  T+  ++ GLC  G+  E L+++D+M     + +  TY + ++GLC
Sbjct: 114 LAK-ILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLC 172

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K   +  A  ++ EM+  GI  D  TYN++I   C   + K    L  E++  K   NVV
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           S NI++  L + GKV EA  + +++ +     D  T+  L++G C    +++A+++ +  
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD-- 290

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                            M ++GC  N  + N+L+NG+ +  +++ A++LF+EM R+   P
Sbjct: 291 ----------------MMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             ++Y+TLI+GLC V R  +A +   EM+  G  P+++TYS+L++ LC++ ++  A+ L 
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
                    PDV +YNI I G+C AG +E A  L+SN+  R   P++ T+N ++ GL K 
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  D+A +++  + E     +  +YN   +GL   ++ S A + L + L RG      T 
Sbjct: 455 GLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTT 514

Query: 612 HILVRAVMNNG 622
            +LV+ + ++G
Sbjct: 515 ALLVKMLSDDG 525



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 225/455 (49%), Gaps = 21/455 (4%)

Query: 91  KALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           K +D F    +++     I   C   + + A   L  + + G +PD  ++ T++ GL   
Sbjct: 80  KKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVV 139

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G +  AL VFD+M   G + NVV Y  L++G  K      A  ++  ++ +  + P++ T
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK-GISPDIFT 198

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN +I+ LC    +     + + M K++   +  +    +  LCK G V  A  V   M+
Sbjct: 199 YNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI 258

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           + G+  D VTY A++DG C   ++ E  +++++M R GC+ NVVSYN LI G  +  ++D
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRID 318

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----------- 376
           +A+ ++E +  +    ++ T+  LI+GLC  G L  AI + NE+   G+           
Sbjct: 319 KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILL 378

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                  RLA+A +L+  ++      +    N  ++G  +A  LE A  LF  ++ +G  
Sbjct: 379 DYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQ 438

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V ++N +I GLCK     EA    +EM E G   +  TY+ +  GL Q+ K   A++L
Sbjct: 439 PDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQL 498

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
             + L +GF+ DV+   +L+  L   G  +   Q+
Sbjct: 499 LEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQI 533



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 234/473 (49%), Gaps = 20/473 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           AL+ F  M        +  +  L+    K   Y     + +++     + P+V T  ++I
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMD-SFGIPPDVYTLTIVI 98

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C   R D  L +  ++ K   + D+ T+ + + GLC  G +  A  V+ +MV  G  
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
            + VTY  +++G C+  ++ E   L+  M  KG   ++ +YN LI  L    +     ++
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
              + +     +  +  ++++ LCK                  EG++ +A  +V+ M + 
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCK------------------EGKVTEAHDVVDMMIQG 260

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + +  T  +LM+G    S+++ A+ +F  M R GC   VVSYNTLING CK++R  +A
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               +EM  +   P+ +TYS LI+GLC   ++  A+ L  + +  G  P++  Y+IL+  
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   ++ +A+ L   ++  N  P++  YN  +DG+ + GD + A ++++++    L+PD
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + ++NI ++GLC    + +A +   +    G L    T++ + + ++ N  ++
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTS 493



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 238/497 (47%), Gaps = 40/497 (8%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY-CPEDV--ALSVIQAYGKNSMPD 90
           + H P       + L     + H S +L L +    +  P DV     VI ++   +  D
Sbjct: 49  HMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVD 108

Query: 91  KALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            AL V  ++           F      LC   +  +A    + +  +G +P+V +YGT++
Sbjct: 109 FALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLM 168

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NGL K   L  AL +F EM  +G+  ++  YN LI       ++     +   +V ++ +
Sbjct: 169 NGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV-KSKI 227

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PNVV+ N++++ LCK G+  E  ++ D M +   E D  TY + + G C    ++ A +
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVK 287

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           V+  MV +G   + V+YN +I+G+C+  +I +   L+E M R+  + N ++Y+ LI GL 
Sbjct: 288 VFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC 347

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------ 375
             G++ +AI+++  +       +  T+ +L++ LCKN  L +A+ +L  +E         
Sbjct: 348 HVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQ 407

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                       G L  A  L + +   G + + +T N ++ G  +   L+ A  LF+EM
Sbjct: 408 VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI-----NGLC 479
              GC     +YNT+  GL +  +   A   ++EML +G+  D+ T +LL+     +GL 
Sbjct: 468 DENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLD 527

Query: 480 QSKKIDMALKLCCQFLQ 496
           QS K     ++ C+F++
Sbjct: 528 QSVK-----QILCEFMR 539



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 114/224 (50%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+  +  +  + L++A+  F  M      P +  +  L+  + K++ +    S  K+M  
Sbjct: 25  NNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS 84

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  PD+ T +++IN  C   ++D AL +  + L+ G  PD   +  L+ GLC  GK+ +
Sbjct: 85  FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE 144

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL ++  M      PN+VTY TLM+GL K     +AL +++ ++ + + PDI +YN  + 
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            LC+          LN+ +   I+P  ++ +I+V A+   G  T
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 248


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 246/500 (49%), Gaps = 22/500 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + EK   FL+ + EKG+ PD+ +Y T+I+     G +  A  +   M  +G    
Sbjct: 235 LCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG 294

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN +I+G  K G Y RAKE++  + + + + P+  TY  ++   CK G   E   ++
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDAVETENIF 353

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+  +   D   + S +    ++GN++ A   +  + E+G+  D V Y  +I G+CR 
Sbjct: 354 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 413

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I E   L   M ++GC ++VV+YN ++ GL +   + EA  ++  + E+    DS T 
Sbjct: 414 GMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL 473

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+G CK G L  A++                  L  +M +   KL+  T N+L++GF
Sbjct: 474 TILIDGHCKLGNLQNAME------------------LFKKMKEKRIKLDVVTYNTLLDGF 515

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A  ++ +M  K   PT +S++ L+N LC      EA+    EM+ K  KP +
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +  + +I G C+S           + + +GF PD   YN LI+G      +  A  L   
Sbjct: 576 MICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKK 635

Query: 529 MKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           M+++    VP++ TYN+++ G  +     +A  +   ++E  + PD  +Y   + G  S 
Sbjct: 636 MEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQ 695

Query: 587 SRMSDAFEFLNDALCRGILP 606
             +++AF F ++ L RG  P
Sbjct: 696 DNLTEAFRFHDEMLQRGFSP 715



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 234/471 (49%), Gaps = 33/471 (7%)

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
           L E+Q+     D+    ++I AY    + ++A ++   M    G   G+         LC
Sbjct: 248 LSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSK-GFSPGVYTYNTVINGLC 306

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +  ++E+AK     +   GL PD  +Y +++    K GD +    +F +M  R V  ++V
Sbjct: 307 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLV 366

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
           C++ ++  F + G+  +A  ++   V E  + P+ V Y ++I G C+ G   E + + + 
Sbjct: 367 CFSSMMSLFTRSGNLDKAL-MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNE 425

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +     D  TY + +HGLCK   +  A++++ EM E G+F D+ T   +IDG C+ G 
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++   EL++ M  K   L+VV+YN L+ G  + G +D A  IW  +  K       +  +
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L+N LC  G+L++A ++ +E+                      G  +D    + +M   G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK--GCSPTVVSYNTLINGLCKVERFGE 451
              +  + N+L+ GF++   +  A  L K+M  K  G  P V +YN++++G C+  +  E
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           A + +++M+E+G  PD  TY+ LING      +  A +   + LQ+GF+PD
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 252/547 (46%), Gaps = 32/547 (5%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           ++  S++  Y      D   D+  R             + R+  +A      L  KG   
Sbjct: 139 EIVNSLVSTYSNCGSNDSVFDLLIR----------TFVQARKLREAYEAFTLLRSKGYTV 188

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
            + +   +I  LV+ G +  A  ++ E+   GV  NV   NI+++   K G   +     
Sbjct: 189 SIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFL 248

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
              V E  VYP++VTYN +I+     G  +E  E+   M         +TY + I+GLCK
Sbjct: 249 SE-VQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCK 307

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVS 312
            G  E A+ V+ EM+ SG+  D+ TY +++   C+ G   E   ++  M  R    ++V 
Sbjct: 308 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVC 367

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           ++ ++     +G +D+A+  +  ++E     D+  + +LI G C+ G +++A+ + NE  
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNE-- 425

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                           M + GC ++  T N++++G  +   L  A  LF EM+ +G  P 
Sbjct: 426 ----------------MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
             +   LI+G CK+     A    K+M EK  K D++TY+ L++G  +   ID A ++  
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
             + K   P    ++IL++ LCS G + +A +++  M  ++  P ++  N+++ G  ++G
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR--GILPTTIT 610
           +          ++ E   PD ISYN  + G      MS AF  +     +  G++P   T
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649

Query: 611 WHILVRA 617
           ++ ++  
Sbjct: 650 YNSILHG 656



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 258/547 (47%), Gaps = 38/547 (6%)

Query: 98  RMNEIFGCEAGILCRKRQFEKAKRFLNSLWE--KGLKPDVYSYGTVINGLVKSGDLLGAL 155
           R+N +   E    CR       +RF++ L       K    S   +I+ LV+SG L  A 
Sbjct: 65  RLNPLAVVEVLYRCRN-DLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQ 123

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGD-----------YMRAKEIWE-----RLVME 199
           +    M  R   + V   N L+  +   G            +++A+++ E      L+  
Sbjct: 124 SCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRS 183

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
                ++   N +I  L + G  +    ++  + ++    + +T    ++ LCK G +E 
Sbjct: 184 KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEK 243

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
                 E+ E G++ D VTYN +I  +   G ++E FEL   M  KG    V +YN +I 
Sbjct: 244 VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL ++GK + A  ++  +     + DSTT+  L+   CK G    A++  N         
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG---DAVETEN--------- 351

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                 + + M       +    +S+M+ F ++  L+ A+  F  +   G  P  V Y  
Sbjct: 352 ------IFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI G C+     EA +   EML++G   D++TY+ +++GLC+ K +  A KL  +  ++G
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD     ILI G C  G +++A++L+  MK++    ++VTYNTL+DG  K GD D A 
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           EIW  ++ + + P  IS++I +  LCS   +S+AF   ++ + + I PT +  + +++  
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585

Query: 619 MNNGAST 625
             +G ++
Sbjct: 586 CRSGNAS 592


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 169/645 (26%), Positives = 307/645 (47%), Gaps = 31/645 (4%)

Query: 2    VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            V++   L+++L   ++   A A FD   R+ G   + H ++ ++  L+    +    ++L
Sbjct: 367  VVTFTILVDVLCKARDFDEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425

Query: 62   ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRK 113
              +E              I  +GK+    KA++ F++M        I  C A +  L   
Sbjct: 426  GTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             +  +AK   N L E GL PD  +Y  ++    K G +  A+ +  EM   G E +V+  
Sbjct: 486  GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            N LID  +K G    A ++++R+  +  + P VVTYN +++GL K GR  + +E+++ M 
Sbjct: 546  NSLIDSLYKAGRVDEAWQMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            + +   ++ ++ + +   CK   VE A +++ +M       D +TYN +I G  +  K+ 
Sbjct: 605  EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664

Query: 294  ECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLI 352
              F  +  + +    + V+   L+ GL++ G++ +AISI  + + +     + +    L+
Sbjct: 665  HAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 353  NGLCKNGYLNKAIQILNEVEEGGEGRLADA--ASLVNRMDKHGCKLNAY----------- 399
             G      ++KAI    E+   G  R  D+    LV  + KH  +L AY           
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICR-EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 400  ------TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                  + N L+   ++    E A  LFK+M   GC+P   ++N L+    K  +  E +
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 454  SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               KEM+ +  KPD ITY+++I+ L +S  +D AL      +   F P    Y  LI GL
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 514  CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
               G++E+A++L+  M    C PN   +N L++G  K GD + A +++  ++ E +RPD+
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 574  ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             SY I +  LC   R+ +A  + N+    G+ P  I ++ ++  +
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/618 (25%), Positives = 292/618 (47%), Gaps = 47/618 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +S   +L +LK+  +P  AL+ F S +  P   H+    + +L  L          R+ +
Sbjct: 87  VSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFL----------RVHD 136

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
            +E           ++ +  + +  +  + LD +  + +      G+    RQ       
Sbjct: 137 KVE----------DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL----RQMTTV--- 179

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           LN + + G   + YSY  +I+ L++SG    AL V+  M   G++ ++  Y+ L+    K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
           K D      + + +  +  + PNV T+ + I  L + G+ DE  E++ RM       D  
Sbjct: 240 KRDSEMVMVLLKEM-EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I  LC AG +E A+ ++ +M  +G   D V Y  ++D F   G +    E W  M
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G + +VV++ IL+  L +    DEA + ++++R++    +  T+  LI GL +    
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR---- 414

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                          GR+ DA  L+  M+  G +  AYT N  ++ F ++ +   A+  F
Sbjct: 415 --------------AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           ++M  KG  P +V+ N  +  L ++ R  EA +    + E G  PD +TY++++    + 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++D A+ L  + ++ G  PDV + N LI  L  AG+V++A Q++  MK     P +VTY
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL K G   KA+E++  ++E++  P+ IS+N  L   C    +  A +  +    
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 602 RGILPTTITWHILVRAVM 619
               P  +T++ ++  ++
Sbjct: 641 MDCKPDVLTYNTVIYGLI 658



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 271/558 (48%), Gaps = 58/558 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +LC+ R F++A    + + ++G+ P++++Y T+I GL+++G +  AL +   M 
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             GV+     YNI ID F K G+  +A E +E++  +  + PN+V  N  +  L + GR 
Sbjct: 430 SVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK-GIVPNIVACNASLYSLAEMGRL 488

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E   M++ +++N    DS TY   +    K G V+ A  +  EM+ +G   D +  N++
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 283 IDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ID   +AG++ E +++++ M   K    VV+YN L+ GL + G+V +AI ++E + EK C
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC 608

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
           + ++ +   L++  CKN          +EVE         A  + ++M    CK +  T 
Sbjct: 609 SPNTISFNTLLDCFCKN----------DEVEL--------ALKMFSKMTVMDCKPDVLTY 650

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML- 460
           N+++ G I+ +K+ +A + F ++ +K   P  V+  TL+ GL K  + G+A S  ++ + 
Sbjct: 651 NTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 461 -------EKGW--------------KPDMITYSLLING--------------LCQSKKID 485
                     W              K  +    L++NG              LC+ K+  
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 486 MALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
            A ++  +F +K G +P +  YN LI  L      E A  L+ +MK   C P+  T+N L
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +    K+G   +  E++  ++  R +PD I+YNI +  L   + +  A +F  D +    
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 605 LPTTITWHILVRAVMNNG 622
            PT  T+  L+  +   G
Sbjct: 890 RPTPRTYGPLIDGLAKVG 907



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/601 (24%), Positives = 274/601 (45%), Gaps = 70/601 (11%)

Query: 63   LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCR 112
            L E+ +  C  DV +  S+I +  K    D+A  +F RM ++        +      L +
Sbjct: 530  LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 113  KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            + + +KA     S+ EK   P+  S+ T+++   K+ ++  AL +F +M     + +V+ 
Sbjct: 590  EGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649

Query: 173  YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM---- 228
            YN +I G  K+     A   W    ++ S++P+ VT   ++ GL KCG+  + + +    
Sbjct: 650  YNTVIYGLIKENKVNHA--FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 229  ------------WDRMK-----KNEREK----------------DSFTYCSFIHGLCKAG 255
                        W+ +      + E +K                DSF     +  LCK  
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL-IPLVRVLCKHK 766

Query: 256  NVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
                A +++ +  +  GI     +YN +I         ++ ++L++ M   GC  +  ++
Sbjct: 767  RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826

Query: 314  NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            N+L+    ++GK+ E   +++ +  + C  D+ T+ ++I+ L K+  L+KA+    ++  
Sbjct: 827  NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886

Query: 374  GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                                 +    T   L++G  +  +LE A+ LF+EMS  GC P  
Sbjct: 887  SD------------------FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 434  VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
              +N LING  K+     A    K M+ +G +PD+ +Y++L++ LC + ++D AL    +
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 494  FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                G  PD   YN +I+GL  + ++E+AL LY+ M+ R  VP+L TYN+LM  L   G 
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 554  CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             ++A  ++  +    L PD+ +YN  ++G         A+    + +  G  P   T+  
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQ 1108

Query: 614  L 614
            L
Sbjct: 1109 L 1109



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 223/483 (46%), Gaps = 24/483 (4%)

Query: 144 GLVKS-GDLLGALAVFDEM--FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           G++KS  D + AL+ F  +  F   + T   C N +++ F +  D +         + + 
Sbjct: 94  GVLKSMTDPIRALSYFYSISEFPTVLHTTETC-NFMLE-FLRVHDKVEDMAAVFEFMQKK 151

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            +  ++ TY  +   L   G   +   + ++M+K     ++++Y   IH L ++G    A
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
             VYR MV  G+     TY+A++    +    +    L + M   G   NV ++ I IR 
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L   GK+DEA  I+  + ++ C  D  T+ VLI+ LC                    G+L
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC------------------NAGQL 313

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            +A  L  +M  +G K +     +L++ F     L+     + +M   G  P VV++  L
Sbjct: 314 ENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTIL 373

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           ++ LCK   F EA++    M ++G  P++ TY+ LI GL ++ +I+ ALKL       G 
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGV 433

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            P    YNI I     +G+   A++ +  MK +  VPN+V  N  +  L + G   +A  
Sbjct: 434 QPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++N + E  L PD ++YN+ +K      ++ +A   L++ +  G  P  I  + L+ ++ 
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 620 NNG 622
             G
Sbjct: 554 KAG 556



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 21/370 (5%)

Query: 109  ILCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
            +LC+ ++   A +  +   +K G+ P + SY  +I  L++      A  +F +M   G  
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 168  TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             +   +N+L+    K G      E+++ ++      P+ +TYN++I+ L K    D+ L+
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
             +  +  ++      TY   I GL K G +E A R++ EM + G   +   +N +I+G+ 
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            + G  +   +L++ M  +G   ++ SY IL+  L   G+VDEA+  +  L+    + D  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             +  +INGL                  G   R+ +A +L N M   G   + YT NSLM 
Sbjct: 1000 AYNRIINGL------------------GKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
                A  +E A  +++E+   G  P V +YN LI G    E    AY+  K M+  G  P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101

Query: 467  DMITYSLLIN 476
            ++ TY+ L N
Sbjct: 1102 NIGTYAQLPN 1111


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 261/510 (51%), Gaps = 25/510 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C+   F +A R +N + +KGL+P+  +Y  +I+ L K G +  AL + D M E+GV   
Sbjct: 347 MCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMT 406

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN LI+   KK D   A      +V E  + PN  +Y+ +I GLC+ G     +E+ 
Sbjct: 407 VYPYNSLINCCCKKDDLDMAMGFLSEMV-EIGLTPNAASYSPVIAGLCRKGDLSGAVELH 465

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +     +++T+ + I+G CKA  ++ A R++ +M ES +  + VT+NA+I+G+C  
Sbjct: 466 RKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLV 525

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGL-LENGKVDEAISIWELLREKNCNA-DST 346
           G I++ F+L++ M  +G   +  +Y  LI GL L +G       + +L  E NC+  +  
Sbjct: 526 GDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL--ENNCSVLNKF 583

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           +   L++G C+                  EGRL +A  + N M   G KL+  +   ++ 
Sbjct: 584 SLTALLHGFCR------------------EGRLTEAYHVWNEMAMWGGKLDLISFTIIVY 625

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
             ++    E +  LF+EM  KG  P  V +  +IN   K     +A +   EM+  G  P
Sbjct: 626 AALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLP 685

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           + +TY+ L+N LC+S  +  A  LC + L   F P+   +N  +    + G +E A  LY
Sbjct: 686 NTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLY 745

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M +   + N+V+ NTL+ G  K G   +A+++ +   E    PD ISY+  +  LC  
Sbjct: 746 FAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKK 804

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVR 616
             +++A E  N+ L +G+ P  + ++IL+R
Sbjct: 805 GDINEAIELWNEMLYKGVKPDIVAYNILIR 834



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 245/503 (48%), Gaps = 29/503 (5%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P +V  ++ I +  K  M D AL +  RM E         +       C+K   + A  F
Sbjct: 370 PNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGF 429

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + E GL P+  SY  VI GL + GDL GA+ +  +M E+GV  N   +  LI+GF K
Sbjct: 430 LSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCK 489

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A  ++ ++  E+++ PN VT+N +I G C  G   +  +++D+M       D++
Sbjct: 490 AKKMDEASRLFNKMT-ESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNY 548

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I GLC       A+    ++  +   ++  +  A++ GFCR G++ E + +W  M
Sbjct: 549 TYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEM 608

Query: 303 GR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
               G L+++S+ I++   L+    +++  ++  ++EK    D+  H  +IN   K G +
Sbjct: 609 AMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNM 668

Query: 362 NKAIQILNE-VEEGGEGRLADAASLVNRMDKHG--------CK--------LNAYTCNSL 404
            +A+   +E + +G         +LVN + K          CK         N+YT N  
Sbjct: 669 VQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCF 728

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++ F     LE A  L+  M  +G    +VS NTLI G CKV +  EA   +    E G+
Sbjct: 729 LDYFATEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGF 787

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD I+YS +I+ LC+   I+ A++L  + L KG  PD+  YNILI      G+ +  L 
Sbjct: 788 FPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLG 847

Query: 525 LYSNMKKRNCVPNLVTYNTLMDG 547
           +Y +M K+   PN  T+  L  G
Sbjct: 848 IYIDMVKKGVQPNWHTHRALFVG 870



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 239/525 (45%), Gaps = 21/525 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + +   G+  D Y Y   I    +  +L GA  +   M + G + +
Sbjct: 172 LVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVS 231

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+LI G  K      A ++ +  ++   V  + VT   ++ G C+    D  LEM 
Sbjct: 232 AVPYNVLIYGLCKNQRVREAVDV-KNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMT 290

Query: 230 DRMKKNEREKDSFTYCSF-IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             M +      S   CSF + GL K G VE A R+  ++ E  +  +   YNA+++  C+
Sbjct: 291 GDMARLGFVP-SEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCK 349

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G   E   L   M  KG   N V+Y ILI  L + G +D+A+ + + +REK        
Sbjct: 350 NGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYP 409

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  LIN  CK   L+ A+  L+E+ E G                 +G L+ A  L  +M 
Sbjct: 410 YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMA 469

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G   N YT  +L+NGF +A K++ A  LF +M+     P  V++N +I G C V    
Sbjct: 470 EKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIR 529

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+    +M+ +G  PD  TY  LI+GLC +     A +            +      L+
Sbjct: 530 KAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALL 589

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           HG C  G++ +A  +++ M       +L+++  ++    K  D +K+  ++  + E+ +R
Sbjct: 590 HGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVR 649

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           PD + +   +        M  A    ++ +  G LP T+T+  LV
Sbjct: 650 PDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALV 694



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 209/470 (44%), Gaps = 55/470 (11%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PD ++   ++  LVK      A  +FD M   GV         L+D +         
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGV---------LLDEY--------- 198

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
                              Y   I   C+    D    +  RM+    +  +  Y   I+
Sbjct: 199 ------------------VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIY 240

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK   V  A  V   M+  G+  D VT   ++ GFCR  ++    E+   M R G + 
Sbjct: 241 GLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVP 300

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +  + + ++ GL + G+V+EA  +   L E     +   +  L+N +CKNG         
Sbjct: 301 SEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMF------- 353

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                      ++A  LVN M   G + N  T   L++   +   +++A+ +   M  KG
Sbjct: 354 -----------SEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKG 402

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
              TV  YN+LIN  CK +    A  F+ EM+E G  P+  +YS +I GLC+   +  A+
Sbjct: 403 VRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAV 462

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  +  +KG   +   +  LI+G C A K+++A +L++ M + N  PN VT+N +++G 
Sbjct: 463 ELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGY 522

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
              GD  KA ++++ ++   L PD  +Y   + GLC     S A EF+ D
Sbjct: 523 CLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 190/404 (47%), Gaps = 19/404 (4%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D  T    +  L K      A  ++  M+ SG+ +D   Y A I  +C    +     L 
Sbjct: 161 DQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLV 220

Query: 300 EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G  ++ V YN+LI GL +N +V EA+ +   +  +   AD  T   L+ G C+ 
Sbjct: 221 ARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRT 280

Query: 359 GYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTC 401
             L+ A+++  ++   G                 +GR+ +A  L  ++ +     N +  
Sbjct: 281 EELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAY 340

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+L+N   +      A  L  EMS KG  P  V+Y  LI+ LCK     +A   +  M E
Sbjct: 341 NALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMRE 400

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG +  +  Y+ LIN  C+   +DMA+    + ++ G TP+   Y+ +I GLC  G +  
Sbjct: 401 KGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSG 460

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A++L+  M ++    N  T+  L++G  K    D+A  ++N + E  L P+ +++N  ++
Sbjct: 461 AVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIE 520

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
           G C    +  AF+  +  +CRG+ P   T+  L+  + + +GAS
Sbjct: 521 GYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGAS 564



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/604 (22%), Positives = 258/604 (42%), Gaps = 38/604 (6%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKA 92
           G A   H    IL  L+  +       + + +        E V  + I+AY +    D A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 93  LDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
             +  RM +             I+G     LC+ ++  +A    NS+  +G+  D  +  
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYG-----LCKNQRVREAVDVKNSMLARGVAADEVTCR 271

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           T++ G  ++ +L  AL +  +M   G   +    + ++DG  KKG    A  +  +L  E
Sbjct: 272 TLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL-GE 330

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + PN+  YN ++N +CK G F E   + + M     E +  TY   IH LCK G ++ 
Sbjct: 331 LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDD 390

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A  +   M E G+ +    YN++I+  C+   +         M   G   N  SY+ +I 
Sbjct: 391 ALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIA 450

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL   G +  A+ +   + EK    ++ T   LING CK                    +
Sbjct: 451 GLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCK------------------AKK 492

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A+ L N+M +   + N  T N+++ G+     +  A  L+ +M  +G +P   +Y +
Sbjct: 493 MDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRS 552

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+GLC  +   +A  FV ++       +  + + L++G C+  ++  A  +  +    G
Sbjct: 553 LISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
              D+  + I+++        E +  L+  MK++   P+ V +  +++   K G+  +AL
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             W+ ++ +   P+ ++Y   +  LC    +S A     + L    LP + T++  +   
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 619 MNNG 622
              G
Sbjct: 733 ATEG 736



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 9/349 (2%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           E G A + + F  ++      K +   SR+   +        E    +VI+ Y       
Sbjct: 470 EKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIR 529

Query: 91  KALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           KA  ++ +M        N  +      LC      KAK F+  L       + +S   ++
Sbjct: 530 KAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALL 589

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G  + G L  A  V++EM   G + +++ + I++    K+ D  ++  ++ R + E  V
Sbjct: 590 HGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLF-REMKEKGV 648

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ V +  MIN   K G   + L  WD M  +    ++ TY + ++ LCK+ ++  AE 
Sbjct: 649 RPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAEL 708

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLE 322
           + +EM+ S    ++ T+N  +D F   G ++   +L+  M +    N+VS N LI+G  +
Sbjct: 709 LCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCK 768

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            G++ EAI +     E     D  ++  +I+ LCK G +N+AI++ NE+
Sbjct: 769 VGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEM 817


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 159/593 (26%), Positives = 279/593 (47%), Gaps = 88/593 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + + A   L  + ++GL+P+V +Y  ++NG V  GD  G   V   M ERGV  NV
Sbjct: 237 CQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNV 296

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V   +L+ G+ KKG    A+++   +  +  +  +   Y V+++G C+ GR ++ + + D
Sbjct: 297 VTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRD 356

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +   + +     + I G CK G V  AERV+  MV+  +  D  +YN ++DG+CR G
Sbjct: 357 EMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREG 416

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD----- 344
           K+ + F L E M   G    VV+YN +I+GL++ G  D+A+ +W L+ E+    +     
Sbjct: 417 KVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCC 476

Query: 345 ------------------------------STTHGVLINGLCKNGYLNKAIQILNEVEEG 374
                                         +     +I+GLCK G L +A  + + ++E 
Sbjct: 477 TMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKEL 536

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  G + +A  +   M++     +    NSL++G  +  KL + 
Sbjct: 537 GLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDV 596

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM  +G SP VV+Y TLI+G C  ++  +A+    EM+E+G+ P+++  S +++ 
Sbjct: 597 TDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSS 656

Query: 478 LCQSKKIDMALKLCCQFLQ------------KGFTPDVTM-------------------- 505
           L +  +I  A  +  + L             K    D+T+                    
Sbjct: 657 LYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSN 716

Query: 506 ---YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YNI I GLC +GK+++A  + S +  R  +P+  TY TL+     +G+ D+A ++ +
Sbjct: 717 NIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRD 776

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +LE+ L P+I  YN  + GLC    +  A         +G++P  +T++IL+
Sbjct: 777 EMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 243/483 (50%), Gaps = 21/483 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  Q  +A+R    + +  LKPD YSY T+++G  + G +  A  + +EM   G+   V
Sbjct: 378 CKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTV 437

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN +I G    G Y  A  +W  L++E  V PN ++   M++   K G  D  + +W 
Sbjct: 438 VTYNTVIKGLVDVGSYDDALHLWH-LMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWK 496

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +      K +  + + I GLCK G +  A  V+  M E G+  D +TY  + DG+C+ G
Sbjct: 497 EILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG 556

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E F++  VM R+    ++  YN LI GL +  K+++   +   ++ +  + +  T+G
Sbjct: 557 NVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYG 616

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM-DK 391
            LI+G C    L+KA  +  E+ E G                 + R+++A  ++++M D 
Sbjct: 617 TLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDF 676

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
               ++    + L+   +     + A  L K       S  +V YN  I+GLCK  +  E
Sbjct: 677 DILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIV-YNIAIDGLCKSGKLDE 735

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S +  ++ +G+ PD  TY  LI+    S  +D A KL  + L+KG  P++T+YN LI+
Sbjct: 736 ARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALIN 795

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC  G ++ A +L+  + ++  VPN VTYN L+    + GD DKA  +   + EE +  
Sbjct: 796 GLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIST 855

Query: 572 DII 574
            II
Sbjct: 856 RII 858



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/622 (26%), Positives = 287/622 (46%), Gaps = 55/622 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-ELIEIQ-----KCY 70
           +P   L+ F  AT+   Y      +  +L  L   +L    + +L +L+++      + Y
Sbjct: 80  HPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAY 139

Query: 71  CPEDVALSV--------------IQAYGKNSMPDKALDVFQRMNEIFGCEA--------G 108
              +   SV              ++A+ +  M   AL VF  M+ I             G
Sbjct: 140 AVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLG 199

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            L +K +   A    + +   G+ PDVY    V+N   + G +  A+ V ++M + G+E 
Sbjct: 200 KLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEP 259

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV YN L++G+  +GD+   + +  RL+ E  V  NVVT  +++ G CK G+ DE  ++
Sbjct: 260 NVVTYNGLVNGYVGRGDFEGVERVL-RLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKL 318

Query: 229 WDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
              ++++E    D   Y   + G C+ G +E A R+  EM+  G+ V+ V  N +I G+C
Sbjct: 319 LREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYC 378

Query: 288 RAGKIKECFELWEVMG----RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           + G++ E   ++  M     +  C    SYN L+ G    GKV +A  + E +       
Sbjct: 379 KLGQVCEAERVFVGMVDWNLKPDCY---SYNTLLDGYCREGKVSKAFMLCEEMLGDGITP 435

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
              T+  +I GL   G  +                  DA  L + M + G   N  +C +
Sbjct: 436 TVVTYNTVIKGLVDVGSYD------------------DALHLWHLMVERGVTPNEISCCT 477

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++ F +    + A+ L+KE+  +G + + V++NT+I+GLCK+ +  EA +    M E G
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD ITY  L +G C++  +  A ++     ++  +  + MYN LI GL    K+ D  
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M+ R   PN+VTY TL+ G       DKA  ++  ++E    P+++  +  +  L
Sbjct: 598 DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657

Query: 584 CSCSRMSDAFEFLNDALCRGIL 605
               R+S+A   L+  L   IL
Sbjct: 658 YRDDRISEATVILDKMLDFDIL 679



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 205/417 (49%), Gaps = 20/417 (4%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG-LCKAGNVEGAERVYRE 266
            +++++    + G     L ++D M +  R       CSF+ G L + G    A  V+ +
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVP-GLRSCSFLLGKLVQKGEGRVAVMVFDQ 216

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           +V +GI  D    + +++  C+ G++    E+ E M ++G   NVV+YN L+ G +  G 
Sbjct: 217 IVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGD 276

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            +    +  L+ E+  + +  T  +L+ G CK G +++A ++L EVEE       D   +
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE-------DELLV 329

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V+           Y    L++G+ Q  ++E+A+ +  EM R G    +V  NTLI G CK
Sbjct: 330 VDE--------RVY--GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCK 379

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           + +  EA      M++   KPD  +Y+ L++G C+  K+  A  LC + L  G TP V  
Sbjct: 380 LGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVT 439

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN +I GL   G  +DAL L+  M +R   PN ++  T++D  FK GD D+A+ +W  IL
Sbjct: 440 YNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEIL 499

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                   +++N  + GLC   ++ +A    +     G+ P  IT+  L      NG
Sbjct: 500 GRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG 556



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 236/500 (47%), Gaps = 61/500 (12%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           +  ++    + G    AL VFDEM   G    +   + L+    +KG+   A  +++++V
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
             T + P+V   ++++N  C+ GR                                   V
Sbjct: 219 -GTGIVPDVYMCSIVVNAHCQVGR-----------------------------------V 242

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
           + A  V  +MV+ G+  + VTYN +++G+   G  +    +  +M  +G   NVV+  +L
Sbjct: 243 DVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTML 302

Query: 317 IRGLLENGKVDEAISIWELLREKNCN----ADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +RG  + GK+DEA    +LLRE   +     D   +GVL++G C+ G +  A++I +E+ 
Sbjct: 303 MRGYCKKGKMDEA---EKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEML 359

Query: 373 EGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             G                  G++ +A  +   M     K + Y+ N+L++G+ +  K+ 
Sbjct: 360 RVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVS 419

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  L +EM   G +PTVV+YNT+I GL  V  + +A      M+E+G  P+ I+   ++
Sbjct: 420 KAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +   +    D A+ L  + L +GFT     +N +I GLC  GK+ +A  ++  MK+    
Sbjct: 480 DCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLS 539

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+ +TY TL DG  K G+  +A +I   +  + +   I  YN  + GL    +++D  + 
Sbjct: 540 PDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDL 599

Query: 596 LNDALCRGILPTTITWHILV 615
           L +   RG+ P  +T+  L+
Sbjct: 600 LVEMQTRGLSPNVVTYGTLI 619



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 141/258 (54%), Gaps = 3/258 (1%)

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L ++ + GEGR+A    + +++   G   + Y C+ ++N   Q  +++ A+ + ++M +
Sbjct: 197 LLGKLVQKGEGRVA--VMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVK 254

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G  P VV+YN L+NG      F      ++ M E+G   +++T ++L+ G C+  K+D 
Sbjct: 255 EGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDE 314

Query: 487 ALKLCCQFLQKGF-TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           A KL  +  +      D  +Y +L+ G C  G++EDA+++   M +     N+V  NTL+
Sbjct: 315 AEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLI 374

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            G  K G   +A  ++  +++  L+PD  SYN  L G C   ++S AF    + L  GI 
Sbjct: 375 KGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGIT 434

Query: 606 PTTITWHILVRAVMNNGA 623
           PT +T++ +++ +++ G+
Sbjct: 435 PTVVTYNTVIKGLVDVGS 452



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 1/125 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A+  L+ L  +G  PD ++Y T+I+    SG++  A  + DEM E+G+  N
Sbjct: 727 LCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN 786

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN LI+G  K G+  RA+ ++ +L  +  + PN VTYN++I   C+ G  D+   + 
Sbjct: 787 ITIYNALINGLCKLGNIDRAQRLFYKL-YQKGLVPNAVTYNILIGCYCRIGDLDKASRLR 845

Query: 230 DRMKK 234
           ++M +
Sbjct: 846 EKMTE 850



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 15/192 (7%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P  +SY+ L++ L     F EA + ++++++     +   Y++  +     K+       
Sbjct: 99  PHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEF------ 152

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                  GF   V  +++L+      G  + AL ++  M +   VP L + + L+  L +
Sbjct: 153 -------GFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQ 203

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G+   A+ +++ I+   + PD+   +I +   C   R+  A E L   +  G+ P  +T
Sbjct: 204 KGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVT 263

Query: 611 WHILVRAVMNNG 622
           ++ LV   +  G
Sbjct: 264 YNGLVNGYVGRG 275



 Score = 42.0 bits (97), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    ++A+R    L++KGL P+  +Y  +I    + GDL  A  + ++M E G+ T 
Sbjct: 797 LCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTR 856

Query: 170 VV 171
           ++
Sbjct: 857 II 858


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 246/497 (49%), Gaps = 20/497 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  QF +    ++ + ++ + PDV ++  +++   ++GD+  A+A+ D M  +G++  +
Sbjct: 170 CKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGL 229

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G  + G + +A+E++ R +    V P+V ++N++I G C+ G  +E L  + 
Sbjct: 230 VTYNSVLKGLLRNGRWDKAREVF-RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYK 288

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+      D  ++   I    + G ++ A    REM E G+  D V Y  +I GFCRAG
Sbjct: 289 EMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAG 348

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   + + M   GCL +VV+YN L+ GL +  ++ +A  +   ++E+    D  T  
Sbjct: 349 LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT 408

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G C++G + K                  A    + +     + +  T N+L++G  
Sbjct: 409 TLIHGYCRDGNIEK------------------ALQFFDTISDQRLRPDIVTYNTLIDGMC 450

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L  A  L+ +M  +   P  V+Y+ LI+  C+  +   A++F+ EM+ KG  P+++
Sbjct: 451 RQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIM 510

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ +I G C+S  +    +   +       PD+  YN LIHG    GK+ +A  L   M
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +  N  P+ VTYN ++ G    G+  +A  ++  +    + PD  +Y   + G       
Sbjct: 571 ENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNS 630

Query: 590 SDAFEFLNDALCRGILP 606
             +F+  ++ L +G+ P
Sbjct: 631 KKSFQLHDEMLQKGLAP 647



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 234/476 (49%), Gaps = 19/476 (3%)

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           E N    NI++  + K   +     +   +  +  V+P+VVT+NVM++   + G  +  +
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEM-EKRCVFPDVVTHNVMVDARFRAGDVEAAM 214

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + D M     +    TY S + GL + G  + A  V+R M   G+  D  ++N +I GF
Sbjct: 215 ALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGF 274

Query: 287 CRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CRAG+++E    + E+ GR+   +VVS++ LI      G++D A      +RE     D 
Sbjct: 275 CRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
             + ++I G C+ G + +A+++ +E+   G                 E RL+DA  L+N 
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNE 394

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M + G   +  T  +L++G+ +   +E A+  F  +S +   P +V+YNTLI+G+C+   
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
            G+A     +M  +   P+ +TYS+LI+  C+  ++D A     + + KG  P++  YN 
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I G C +G V    Q    M+    +P+L+TYNTL+ G  K G   +A  +   +  E 
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           ++PD ++YN+ + G      M +A         RGI P   T+  ++   +  G S
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNS 630



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 211/429 (49%), Gaps = 19/429 (4%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           RLV+ ++   N  T N+M++  CK  +F E   +   M+K     D  T+   +    +A
Sbjct: 148 RLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRA 207

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G+VE A  +   MV  GI    VTYN+++ G  R G+  +  E++  M   G   +V S+
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N+LI G    G+++EA+  ++ +R +    D  +   LI    + G ++ A + L E+ E
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              G   +      ++ GF +A  +  A+ +  EM   GC P V
Sbjct: 328 ------------------FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDV 369

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YNTL+NGLCK  R  +A   + EM E+G  PD+ T++ LI+G C+   I+ AL+    
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              +   PD+  YN LI G+C  G +  A +L+ +M  R   PN VTY+ L+D   + G 
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D A    + ++ + + P+I++YN  +KG C    +S   +FL       ++P  IT++ 
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549

Query: 614 LVRAVMNNG 622
           L+   +  G
Sbjct: 550 LIHGYVKEG 558



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 247/526 (46%), Gaps = 43/526 (8%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVH---- 56
           +   A RL+    +E N +T   +  S  +   +     +   + +R + P +V H    
Sbjct: 142 LTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMV 201

Query: 57  --------VSRILELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMN----- 100
                   V   + LI+  + K   P  V   SV++   +N   DKA +VF+ M+     
Sbjct: 202 DARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVA 261

Query: 101 ---EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV 157
                F    G  CR  + E+A RF   +  + + PDV S+  +I    + G++  A   
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
             EM E G+  + V Y ++I GF + G  + A  + + +V      P+VVTYN ++NGLC
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV-AFGCLPDVVTYNTLLNGLC 380

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           K  R  +  E+ + MK+     D  T+ + IHG C+ GN+E A + +  + +  +  D V
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440

Query: 278 TYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           TYN +IDG CR G + +  ELW+ M  R+   N V+Y+ILI    E G+VD A +  + +
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
             K    +  T+  +I G C++G ++K  Q L ++                R DK    L
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM----------------RHDKVMPDL 544

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
             Y  N+L++G+++  K+  A  L K M  +   P  V+YN +I+G        EA    
Sbjct: 545 ITY--NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           K+M  +G +PD  TY  +ING   +     + +L  + LQKG  PD
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 215/429 (50%), Gaps = 20/429 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  +++KA+    ++   G+ PDV S+  +I G  ++G+L  AL  + EM  R V  +
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ LI  F ++G+   A E + R + E  + P+ V Y ++I G C+ G   E L + 
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAE-YLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR 357

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       D  TY + ++GLCK   +  AE +  EM E G+  D  T+  +I G+CR 
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I++  + ++ +  +    ++V+YN LI G+   G + +A  +W+ +  +    +  T+
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+  C+ G ++ A   L+E              +VN+    G   N  T NS++ G+
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDE--------------MVNK----GIVPNIMTYNSIIKGY 519

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            ++  +        +M      P +++YNTLI+G  K  +  EA++ +K M  +  +PD 
Sbjct: 520 CRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDA 579

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+++I+G      +  A  +  +   +G  PD   Y  +I+G   AG  + + QL+  
Sbjct: 580 VTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDE 639

Query: 529 MKKRNCVPN 537
           M ++   P+
Sbjct: 640 MLQKGLAPD 648



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 209/420 (49%), Gaps = 19/420 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++ +S  P    ++++I    +  +  E  E +  +  +     +    + +  L +AG 
Sbjct: 80  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGW 139

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
                  YR ++ S   V+  T N M+  +C+  +  E   +   M ++    +VV++N+
Sbjct: 140 PHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           ++      G V+ A+++ + +  K       T+  ++ GL +NG  +KA ++        
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA----- 254

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        MD  G   +  + N L+ GF +A +LE A+  +KEM  +  +P VVS
Sbjct: 255 -------------MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVS 301

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           ++ LI    +      A  +++EM E G  PD + Y+++I G C++  +  AL++  + +
Sbjct: 302 FSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV 361

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PDV  YN L++GLC   ++ DA +L + MK+R   P+L T+ TL+ G  + G+ +
Sbjct: 362 AFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIE 421

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL+ ++ I ++RLRPDI++YN  + G+C    +  A E  +D   R I P  +T+ IL+
Sbjct: 422 KALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 46/524 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC+ ++ EK+      +   G+ PDVY+Y  +I+   K+G +  A + FDEM   G   
Sbjct: 461 FLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV Y  L+  + K    ++A +I+ R+V + + YPN VTY+ +I+GLCK G   +  E+
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMV-DAACYPNAVTYSALIDGLCKAGEIQKACEV 579

Query: 229 WDRM--KKNEREKDSF--------------TYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++++       E D +              TY + I GLCKA  V  A  +   M+ +G 
Sbjct: 580 YEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC 639

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             + + Y+A+IDGFC+ GKI    E++  M + G L +V +Y  LI  + ++G++D A+ 
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +   +   +CN +  T+  +I+GL K G + KA+ +L+ +EE                  
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE------------------ 741

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC  N  T  +L++G  +  K + ++ LFK+M+ KGC+P  V+Y  LIN  C      E
Sbjct: 742 KGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+  + EM    W   +  Y   + G   SKK   +L L  +       P   +Y +LI 
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLID 859

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVT---YNTLMDGLFKTGDCDKALEIWNHILEER 568
               AG++E AL+L+  + + +   N+ +   Y +L+  L      ++A  ++  +  + 
Sbjct: 860 SFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKG 919

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           + PD+I +   +KGL   ++  +A +     LC G     + W 
Sbjct: 920 IVPDLIVFVSLVKGLIEVNKWDEALQ-----LCYGRCHEGVNWQ 958



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 255/494 (51%), Gaps = 10/494 (2%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +K+QF   KR +N +  +G  P+   + ++++G   +GD   A  +F+ M   G     V
Sbjct: 318 KKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYV 377

Query: 172 CYNILIDGFFKKGDYMRAK------EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            YNI I     + +   A+      +++E ++  + V   V T N     LC  G+F++ 
Sbjct: 378 AYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTAN-FSRCLCGVGKFEKA 436

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            ++   M +     D+ TY   I  LC+A  VE +  +++EM  +G+  D  TY  +ID 
Sbjct: 437 FQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+AG I++    ++ M   GC  NVV+Y  L+   L++ ++ +A  I+  + +  C  +
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + T+  LI+GLCK G + KA ++  ++  G  G + ++       D      N  T  +L
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLI-GTSGNV-ESDFYFEGNDTCTIAPNVVTYGAL 614

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++G  +A K+ +A  L   M   GC P  + Y+ LI+G CK+ +   A      M + G+
Sbjct: 615 IDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P + TY+ LI+ + +  ++D+A+K+  + L     P+V  Y  +I GL   G++E AL 
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L S M+++ C PN+VTY  L+DGL KTG  D +L+++  +  +   P+ ++Y + +   C
Sbjct: 735 LLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCC 794

Query: 585 SCSRMSDAFEFLND 598
           +   + +A   L++
Sbjct: 795 AAGLLDEAHLLLDE 808



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 157/532 (29%), Positives = 252/532 (47%), Gaps = 45/532 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +FEKA + L  +  KG  PD  +Y  VI  L ++  +  +  +F EM   GV  +
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y ILID F K G   +A+  W   +      PNVVTY  +++   K  +  +  +++
Sbjct: 487 VYTYTILIDSFCKAGLIEQARS-WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM------VESGIFVDA------- 276
            RM       ++ TY + I GLCKAG ++ A  VY ++      VES  + +        
Sbjct: 546 HRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIA 605

Query: 277 ---VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
              VTY A+IDG C+A K+ +  EL + M   GC  N + Y+ LI G  + GK+D A  +
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665

Query: 333 WELLREKNCNADSTTHGV--LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
           +  LR   C    + H    LI+ + K+G L+ A+++L+E                  M 
Sbjct: 666 F--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE------------------ML 705

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
              C  N  T  ++++G  +  ++E A+ L   M  KGCSP VV+Y  LI+GL K  +  
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            +    K+M  KG  P+ +TY +LIN  C +  +D A  L  +     +   +  Y+  +
Sbjct: 766 ASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G   + K   +L L   M+    VP    Y  L+D   K G  + ALE+   ++E    
Sbjct: 826 QGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSS 883

Query: 571 PDIIS---YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            ++ S   Y   ++ LC  S++ +AF    +   +GI+P  I +  LV+ ++
Sbjct: 884 LNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLI 935



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 251/524 (47%), Gaps = 44/524 (8%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F +A  FL+ +      P+V +Y T+++G +K         + + M   G   N   +N 
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ G+   GDY  A +++ R+    S  P  V YN+ I  +C         E+ D ++K 
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSP-PGYVAYNIFIGSICGQEELPNA-ELLDLVEKV 404

Query: 236 EREK-------DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             E        +     +F   LC  G  E A ++ +EM+  G   D  TY  +I   C+
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A K+++ F L++ M R G   +V +Y ILI    + G +++A S ++ +R   C+ +  T
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L++   K+  L +A  I +        R+ DAA          C  NA T ++L++G
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFH--------RMVDAA----------CYPNAVTYSALIDG 566

Query: 408 FIQASKLENAI----------------FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             +A +++ A                 F F+       +P VV+Y  LI+GLCK ++  +
Sbjct: 567 LCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSD 626

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+  +  ML  G +P+ I Y  LI+G C+  KID A ++  +  + G+ P V  Y  LI 
Sbjct: 627 AHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLID 686

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            +   G+++ A+++ S M   +C PN+VTY  ++DGL K G+ +KAL + + + E+   P
Sbjct: 687 RMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++++Y   + GL    +   + +       +G  P  +T+ +L+
Sbjct: 747 NVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 250/541 (46%), Gaps = 45/541 (8%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           A  LC+  ++  A   LN L ++    D      +I+GL+++     A++    M     
Sbjct: 246 AQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSC 302

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             NVV Y  L+ GF KK  +   K I   ++M     PN   +N +++G C  G +    
Sbjct: 303 IPNVVTYRTLLSGFLKKKQFGWCKRII-NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAY 361

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE------RVYREMVESGIFVDAVTYN 280
           ++++RM           Y  FI  +C    +  AE      +VY EM+ +   ++ V   
Sbjct: 362 KLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTA 421

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
                 C  GK ++ F++ + M RKG + +  +Y  +I  L +  KV+++  +++ ++  
Sbjct: 422 NFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA 481

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
             N D  T+ +LI+  CK G + +A    +E                  M   GC  N  
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQARSWFDE------------------MRSVGCSPNVV 523

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T  +L++ ++++ +L  A  +F  M    C P  V+Y+ LI+GLCK     +A    +++
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583

Query: 460 LEKGWK----------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           +                     P+++TY  LI+GLC+++K+  A +L    L  G  P+ 
Sbjct: 584 IGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +Y+ LI G C  GK+++A +++  M K   +P++ TY +L+D +FK G  D A+++ + 
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +L +   P++++Y   + GL     +  A   L+    +G  P  +T+  L+  +   G 
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763

Query: 624 S 624
           +
Sbjct: 764 A 764



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 196/498 (39%), Gaps = 112/498 (22%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           NV++   C+ G +DE LE   R+K       + TY + +  L  AG VE   RV +EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           SG  +D  T        C+ G+  +   + E       L+ V    +I GL+E    +EA
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE--KEDFNLDTVLCTQMISGLMEASLFNEA 290

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +S    +R  +C  +  T+  L++G  K        +I                  +N M
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRI------------------INMM 332

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING------- 442
              GC  N    NSL++G+  A     A  LF  M+  G  P  V+YN  I         
Sbjct: 333 MTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEEL 392

Query: 443 ----------------------------------LCKVERFGEAYSFVKEMLEKGWKPDM 468
                                             LC V +F +A+  +KEM+ KG+ PD 
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT 452

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ +I  LCQ+KK++ +  L  +  + G  PDV  Y ILI   C AG +E A   +  
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512

Query: 529 MKKRNCVPNLVTYNTLM-----------------------------------DGLFKTGD 553
           M+   C PN+VTY  L+                                   DGL K G+
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572

Query: 554 CDKALEIWNHILEER----------------LRPDIISYNITLKGLCSCSRMSDAFEFLN 597
             KA E++  ++                   + P++++Y   + GLC   ++SDA E L+
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632

Query: 598 DALCRGILPTTITWHILV 615
             L  G  P  I +  L+
Sbjct: 633 AMLAAGCEPNQIVYDALI 650



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 154/370 (41%), Gaps = 28/370 (7%)

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           AER+ RE+ E    V     N ++   CR G   E  E    +   G   + V+YN L++
Sbjct: 153 AERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQ 212

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L   G+V+    + + +       D +T G     LCK                   GR
Sbjct: 213 VLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCK------------------VGR 254

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
            ADA   +N ++K    L+   C  +++G ++AS    A+     M    C P VV+Y T
Sbjct: 255 WADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRT 311

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           L++G  K ++FG     +  M+ +G  P+   ++ L++G C +     A KL  +    G
Sbjct: 312 LLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG 371

Query: 499 FTPDVTMYNILIHGLCSAGKVEDA------LQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
             P    YNI I  +C   ++ +A       ++Y  M   +CV N V        L   G
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             +KA +I   ++ +   PD  +Y   +  LC   ++  +F    +    G+ P   T+ 
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYT 491

Query: 613 ILVRAVMNNG 622
           IL+ +    G
Sbjct: 492 ILIDSFCKAG 501



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 114/298 (38%), Gaps = 48/298 (16%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI---------------LEL 63
           HT  +L D   ++     +  +   +L    +P +V + + I               L L
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSL 738

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           +E + C        ++I   GK    D +L +F++MN                       
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN----------------------- 775

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
                KG  P+  +Y  +IN    +G L  A  + DEM       ++  Y+  + GF KK
Sbjct: 776 ----SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK 831

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE---KD 240
             ++ +  + E +    +V P    Y ++I+   K GR +  LE+   + +         
Sbjct: 832 --FIASLGLLEEMESHETV-PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTS 888

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           +  Y S I  LC A  VE A  +Y EM   GI  D + + +++ G     K  E  +L
Sbjct: 889 TGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 257/500 (51%), Gaps = 13/500 (2%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           AG L +K+Q    KR ++ +  +G  P+   + ++++    + D   A  + + M   G 
Sbjct: 317 AGFL-KKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC 375

Query: 167 ETNVVCYNILIDGFFKKGDYMR-------AKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
               V YNI I G    G+ +        A++++E ++  + V   V T N     LC  
Sbjct: 376 PPGYVVYNIFI-GSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGM 433

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+FD+  ++   M +     D+ TY   I  LC+A  VE A  +++EM   G+  D  TY
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             +ID FC+ G I++    ++ M   GC  +VV+Y  L+   L+  +V +A  I+  + +
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
             C  ++ T+  L++GLCK G   KA ++  ++    +   +D        D      N 
Sbjct: 554 AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTD--SIAPNV 611

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L++G  +A K+ +A  L   MS  GC P  + Y+ LI+G CKV +   A      
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M + G+ P + TY+ LI+ + + +++D+A+K+  Q L+   TP+V  Y  +I GLC  G+
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            + AL+L S M+KR C PN+VTY +L+DGL K+G  D +L+++  ++ +   P+ ++Y +
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791

Query: 579 TLKGLCSCSRMSDAFEFLND 598
            +   C+   + +A   L++
Sbjct: 792 LINHCCAAGLLDEAHSLLSE 811



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 254/524 (48%), Gaps = 46/524 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC   + EKA      +   G+ PDVY+Y  +I+   K G +  A + FDEM   G   
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSP 523

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV Y  L+  + K     +A +I+ R+V +    PN +TY+ +++GLCK G   +  E+
Sbjct: 524 SVVTYTALLHAYLKTKQVPQASDIFHRMV-DAGCAPNTITYSALVDGLCKAGESQKACEV 582

Query: 229 WDRM----------------KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           + +M                  +    +  TY + I GLCKA  V  A+ +   M  +G 
Sbjct: 583 YAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGC 642

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAIS 331
             + + Y+A+IDGFC+ GK+    E++  M + G L  V +Y  LI  + ++ ++D AI 
Sbjct: 643 EPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIK 702

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +   + E +C  +  T+  +I+GLC+ G   KA+++L+                   M+K
Sbjct: 703 VLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLS------------------MMEK 744

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC  N  T  SL++G  ++ K++ ++ LF +M  +GC+P  V+Y  LIN  C      E
Sbjct: 745 RGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDE 804

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+S + EM +  W   +  Y  ++ G   SKK   +L L  +    G      +Y +LI 
Sbjct: 805 AHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLID 862

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLV---TYNTLMDGLFKTGDCDKALEIWNHILEER 568
               AG++E AL+L+  M + +   N+    TY +L+  L      +KA E+++ I  + 
Sbjct: 863 SFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKG 922

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           + P++ ++   +KGL   ++ ++A +     LC  +    + W 
Sbjct: 923 VVPELSAFICLIKGLIKVNKWNEALQ-----LCYSMCDEGVNWQ 961



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 239/518 (46%), Gaps = 79/518 (15%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMP-DKALDVFQRMNEI--------FGCEAGI 109
           +I++L+ ++K + P+    S +  +   +M  +KA  +FQ M  +        +      
Sbjct: 441 QIIKLM-MRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDS 499

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    E+A+ + + +   G  P V +Y  +++  +K+  +  A  +F  M + G   N
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPN 559

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMET---------------SVYPNVVTYNVMIN 214
            + Y+ L+DG  K G+  +A E++ +++  +               S+ PNVVTY  +I+
Sbjct: 560 TITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALID 619

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY---------- 264
           GLCK  +  +  E+ D M  N  E +   Y + I G CK G ++ A+ V+          
Sbjct: 620 GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLP 679

Query: 265 -------------------------REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
                                     +M+ES    + VTY AMIDG CR G+ ++  +L 
Sbjct: 680 TVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +M ++GC  NVV+Y  LI GL ++GKVD ++ ++  +  + C  +  T+ VLIN  C  
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAA 799

Query: 359 GYLNKAIQILNE---------------VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           G L++A  +L+E               V +G   +   +  L+  ++ HG    A     
Sbjct: 800 GLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGL 859

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVS---YNTLINGLCKVERFGEAYSFVKEML 460
           L++ F +A +LE A+ L KEM     S  + S   Y +LI  LC   +  +A+    E+ 
Sbjct: 860 LIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEIT 919

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
            KG  P++  +  LI GL +  K + AL+LC     +G
Sbjct: 920 RKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 194/483 (40%), Gaps = 46/483 (9%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+++    + G + +A E   RL  +    P+  TYN ++  L   G+ D    +   M 
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRL-KDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF-VDAVTYNAMIDGFCRAGKI 292
           +     D FT   F   LCK G    A      M+E   F +D V    MI G   A   
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDA----LVMIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E       M    C+ NVV+Y  L+ G L+  ++     I  ++  + CN + +    L
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350

Query: 352 INGLCKNGYLNKAIQILNEV-----------------------EEGGEGRLADAASLVNR 388
           ++  C       A ++LN +                       E      LA A  +   
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEE 410

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M    C LN     +         K + A  + K M RKG  P   +Y+ +I  LC+  +
Sbjct: 411 MLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMK 470

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             +A+   +EM   G  PD+ TY++LI+  C+   I+ A     +    G +P V  Y  
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL--- 565
           L+H      +V  A  ++  M    C PN +TY+ L+DGL K G+  KA E++  ++   
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590

Query: 566 -------------EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
                         + + P++++Y   + GLC   ++ DA E L+     G  P  I + 
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 613 ILV 615
            L+
Sbjct: 651 ALI 653



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 185/466 (39%), Gaps = 27/466 (5%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G      CYN L +      D  R  E   R + E          NV++   C+ G + +
Sbjct: 132 GYSHTGACYNALAE-VLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAK 190

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            LE   R+K         TY + +  L  AG ++   RV +EM E G   D  T      
Sbjct: 191 ALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQ 250

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
             C+ G+  +   + E    K  L+ V    +I GL+E    DEAIS    +R  +C  +
Sbjct: 251 ALCKEGRWSDALVMIEREDFK--LDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPN 308

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  L+ G  K   L    +I                  ++ M   GC  N    NSL
Sbjct: 309 VVTYRTLLAGFLKKKQLGWCKRI------------------ISMMMNEGCNPNPSLFNSL 350

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE------AYSFVKE 458
           ++ +  A     A  L   M+  GC P  V YN  I  +C  E          A    +E
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEE 410

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ML      + +  +     LC   K D A ++    ++KGF PD + Y+ +I  LC A K
Sbjct: 411 MLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMK 470

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE A  L+  MK    +P++ TY  L+D   K G  ++A   ++ +      P +++Y  
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            L       ++  A +  +  +  G  P TIT+  LV  +   G S
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES 576



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 152/326 (46%), Gaps = 15/326 (4%)

Query: 54  VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGC 105
           VV    +L+++    C     +  ++I  + K    D A +VF RM++         +  
Sbjct: 627 VVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTS 686

Query: 106 EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
               + + R+ + A + L+ + E    P+V +Y  +I+GL + G+   AL +   M +RG
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
              NVV Y  LIDG  K G    + +++ +++ +    PN VTY V+IN  C  G  DE 
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCA-PNYVTYRVLINHCCAAGLLDEA 805

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             +   MK+    K    YCS + G  K      +  +  E+   G+   A  Y  +ID 
Sbjct: 806 HSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDS 863

Query: 286 FCRAGKIKECFELW-EVMGRKGCLNVVS---YNILIRGLLENGKVDEAISIWELLREKNC 341
           F +AG++++  EL  E+M     LN+ S   Y  LI+ L    ++++A  ++  +  K  
Sbjct: 864 FSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGV 923

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQI 367
             + +    LI GL K    N+A+Q+
Sbjct: 924 VPELSAFICLIKGLIKVNKWNEALQL 949


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 251/491 (51%), Gaps = 34/491 (6%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V S   +I  L     L  A  V + +   G   + V +N L+ G+ + G    A+ +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            E      S   NVVTY  +I+G C+ GR  + L +   M       D++TY + + GLC
Sbjct: 173 VE--AARASGTANVVTYTALIDGYCRSGRLADALRLIASMPV---APDTYTYNTVLKGLC 227

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            A   E AE + REM+ +    + VT+   I  FC+ G +    EL E M + GC  +V+
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVI 287

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+ L+ G  E+G+VDEA+   +LL    C  ++  +   + GLC          I    
Sbjct: 288 IYSTLVNGFSEHGRVDEAL---KLLNTMLCRPNTVCYNAALKGLC----------IAGRW 334

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           EE GE        L+  M +  C  N  T ++L+N   Q   +E A+ + ++M + G  P
Sbjct: 335 EEVGE--------LIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 386

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSYNT+I+      R  +A   +K ML    KPD I+++ ++  LC++K+   A++L 
Sbjct: 387 DVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELV 443

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + L+K    +   +NILI  LC  G+V+DA++++  M K  C+P++VTY++L++G  + 
Sbjct: 444 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 503

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A +++  +     R DI SYN TLKGLC  +R  DA E + D +    LP  +T+
Sbjct: 504 GLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 560

Query: 612 HILVRAVMNNG 622
           +IL+ ++   G
Sbjct: 561 NILISSLCQKG 571



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 276/612 (45%), Gaps = 71/612 (11%)

Query: 51  PKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI- 109
           P+  V    +  L+E+       D AL ++   G +S P  + D       +  C   I 
Sbjct: 71  PRPGVASRTLRRLVELDNL----DAALRLLLG-GPSSTPATS-DSAPEPPAVISCNILIK 124

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC +R+   A+R L +L   G   D  S+ T++ G  + G L  A  V +     G   
Sbjct: 125 KLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERVVEAARASGT-A 182

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV Y  LIDG+ + G    A     RL+    V P+  TYN ++ GLC   ++++  E+
Sbjct: 183 NVVTYTALIDGYCRSGRLADAL----RLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEEL 238

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M +N    +  T+ + I   C+ G ++ A  +  +M + G   D + Y+ +++GF  
Sbjct: 239 MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSE 298

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            G++ E  +L   M  +   N V YN  ++GL   G+ +E   +   +  K+C  +  T 
Sbjct: 299 HGRVDEALKLLNTMLCRP--NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 356

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG--------------------------------- 375
             LIN LC+N  +  A+++L ++++ G                                 
Sbjct: 357 STLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLC 416

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             R  DA  LV +M K  C++N  T N L++   Q  ++++AI 
Sbjct: 417 KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIE 476

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F+ M +  C P +V+Y++LING  +      A+   + M     + D+ +Y+  + GLC
Sbjct: 477 VFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLC 533

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            + + D A +L    + +   P+   +NILI  LC  G V  A+ +Y  M K    P++ 
Sbjct: 534 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 593

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TYN L++G  + G  D AL+  + +  E   PD ISYN  LKGLC   R  DA + + + 
Sbjct: 594 TYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEM 650

Query: 600 LCRGILPTTITW 611
           L +   P  +T+
Sbjct: 651 LRKNCTPNEVTF 662


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 249/474 (52%), Gaps = 20/474 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P  + +  +++ LV +      +++F +    G+  ++   +ILI+ F  +     A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +   +++   +PN +T N +I GLC  G   + L   D++     + D  +Y + I+GLC
Sbjct: 115 FAN-ILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G  +   R+ R++    +  D V YN +I+  C+   + +  +++  M  KG   +VV
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G + EA S+   ++ KN N +  T  +LI+ L K              
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK-------------- 279

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A  L+  M K   K + +T NSL++G+    ++++A ++F  M+++G +P
Sbjct: 280 ----EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTP 335

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V  Y  +INGLCK +   EA S  +EM  K   PD++TY+ LI+GLC++  ++ A+ LC
Sbjct: 336 DVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALC 395

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  ++G  PDV  Y IL+ GLC +G++EDA +++  +  +    N+  Y  L++ L K 
Sbjct: 396 KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKA 455

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           G  D+AL++ + + ++   PD ++++I ++ L        A + L + + RG+L
Sbjct: 456 GFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 234/461 (50%), Gaps = 20/461 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   + +             G+ PD+ +   +IN       +  A +VF  + +RG   N
Sbjct: 67  LVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPN 126

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            +  N LI G   +G+  +A    ++LV +     + V+Y  +INGLCK G       + 
Sbjct: 127 AITLNTLIKGLCFRGEIKKALYFHDQLVAQ-GFQLDQVSYGTLINGLCKTGETKAVARLL 185

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +++ +  + D   Y + I+ LCK   +  A  VY EM+  GI  D VTY  +I GFC  
Sbjct: 186 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 245

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +KE F L   M  K    NV ++NILI  L + GK+ EA  +  ++ +     D  T+
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI     +GY      +++EV+         A  +   M + G   +     +++NG 
Sbjct: 306 NSLI-----DGYF-----LVDEVKH--------AKYVFYSMAQRGVTPDVQCYTNMINGL 347

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ LF+EM  K   P +V+YN+LI+GLCK      A +  K M E+G +PD+
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +Y++L++GLC+S +++ A ++  + L KG+  +V  Y +LI+ LC AG  ++AL L S 
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSK 467

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           M+ + C+P+ VT++ ++  LF+  + DKA +I   ++   L
Sbjct: 468 MEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 199/420 (47%), Gaps = 19/420 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    +N +++ L     +   + ++ + + N    D  T    I+  C   ++  A  V
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           +  +++ G   +A+T N +I G C  G+IK+     + +  +G  L+ VSY  LI GL +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G+      +   L   +   D   +  +IN LCKN  L                   DA
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL------------------GDA 216

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             + + M   G   +  T  +L++GF     L+ A  L  EM  K  +P V ++N LI+ 
Sbjct: 217 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDA 276

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  EA   +  M++   KPD+ TY+ LI+G     ++  A  +     Q+G TPD
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  Y  +I+GLC    V++A+ L+  MK +N +P++VTYN+L+DGL K    ++A+ +  
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + E+ ++PD+ SY I L GLC   R+ DA E     L +G       + +L+  +   G
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%)

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+  F  M      P    +N +++ L   + +    S  K+    G  PD+ T S+LIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C    I +A  +    L++GF P+    N LI GLC  G+++ AL  +  +  +    
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + V+Y TL++GL KTG+      +   +    ++PD++ YN  +  LC    + DA +  
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 597 NDALCRGILPTTITWHILVRA 617
           ++ + +GI P  +T+  L+  
Sbjct: 221 SEMIVKGISPDVVTYTTLIHG 241


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 255/493 (51%), Gaps = 22/493 (4%)

Query: 133 PDVYSYGTVINGL--VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P ++ +  +++ +  +K  DL+ +LA+  +M + G E ++V  + L++G+        A 
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + +++V E    P+ +T+  +I+GL    +  E + + DRM +   + +  TY   ++G
Sbjct: 100 ALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 158

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           LCK G+++ A  +  +M  + I  D V +N +ID  C+   + +   L++ M  KG   N
Sbjct: 159 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+Y+ LI  L   G+  +A  +   + EK  N +  T   LI+   K            
Sbjct: 219 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK------------ 266

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 EG+  +A  L + M K     + +T NSL+NGF    +L+ A  +F+ M  K C
Sbjct: 267 ------EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P + +YNTLI G CK +R  +     +EM  +G   D +TY+ LI GL      D A K
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  Q +  G  PD+  Y+IL+ GLC+ GK+E AL+++  M+K     ++  Y T+++G+ 
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D   +++  +  + ++P++++YN  + GLCS   + +A+  L      G LP + 
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500

Query: 610 TWHILVRAVMNNG 622
           T++ L+RA + +G
Sbjct: 501 TYNTLIRAHLRDG 513



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 239/462 (51%), Gaps = 20/462 (4%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  + + G +P + +  +++NG      +  A+A+ D+M E G   + + +  LI G F
Sbjct: 66  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
                  A  + +R+V +    PN+VTY V++NGLCK G  D    + ++M+  + E D 
Sbjct: 126 LHNKASEAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 184

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
             + + I  LCK  +V+ A  +++EM   GI  + VTY+++I   C  G+  +  +L  +
Sbjct: 185 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 244

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ +K   N+V++N LI   ++ GK  EA  + + + +++ + D  T+  LING C +  
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L+KA Q+                     M    C  +  T N+L+ GF ++ ++E+   L
Sbjct: 305 LDKAKQMF------------------EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 346

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F+EMS +G     V+Y TLI GL        A    K+M+  G  PD++TYS+L++GLC 
Sbjct: 347 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 406

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           + K++ AL++     +     D+ +Y  +I G+C AGKV+D   L+ ++  +   PN+VT
Sbjct: 407 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 466

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           YNT++ GL       +A  +   + E+   PD  +YN  ++ 
Sbjct: 467 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 225/452 (49%), Gaps = 22/452 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C  ++   A   ++ + E G +PD  ++ T+I+GL        A+A+ D M +RG + N+
Sbjct: 90  CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 149

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V Y ++++G  K+GD   A  +  +  ME + +  +VV +N +I+ LCK    D+ L ++
Sbjct: 150 VTYGVVVNGLCKRGDIDLAFNLLNK--MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      +  TY S I  LC  G    A ++  +M+E  I  + VT+NA+ID F + 
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E  +L + M ++    ++ +YN LI G   + ++D+A  ++E +  K+C  D  T+
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK+                   R+ D   L   M   G   +  T  +L+ G 
Sbjct: 328 NTLIKGFCKSK------------------RVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                 +NA  +FK+M   G  P +++Y+ L++GLC   +  +A      M +   K D+
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ +I G+C++ K+D    L C    KG  P+V  YN +I GLCS   +++A  L   
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           MK+   +P+  TYNTL+    + GD   + E+
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 521



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 35/489 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN     K    A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLF---LHNKASEAV 134

Query: 62  ELIE--IQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            L++  +Q+   P  V   V+     K    D A ++  +M          IF      L
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  + A      +  KG++P+V +Y ++I+ L   G    A  +  +M E+ +  N+
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LID F K+G ++ A+++ + ++ + S+ P++ TYN +ING C   R D+  +M++
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M   +   D  TY + I G CK+  VE    ++REM   G+  D VTY  +I G    G
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 ++++ M   G   ++++Y+IL+ GL  NGK+++A+ +++ +++     D   + 
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 433

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I G+CK                   G++ D   L   +   G K N  T N++++G  
Sbjct: 434 TMIEGMCK------------------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 475

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               L+ A  L K+M   G  P   +YNTLI    +      +   ++EM    +  D  
Sbjct: 476 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 535

Query: 470 TYSLLINGL 478
           T  L+ N L
Sbjct: 536 TIGLVANML 544



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 116/212 (54%), Gaps = 2/212 (0%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS--FVKEMLEKGWKPDMIT 470
           KL++AI LF  M +    P++  +N L++ + K+++F    S   + +M++ G++P ++T
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
            S L+NG C  K+I  A+ L  Q ++ G+ PD   +  LIHGL    K  +A+ L   M 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           +R C PNLVTY  +++GL K GD D A  + N +   ++  D++ +N  +  LC    + 
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DA     +   +GI P  +T+  L+  + + G
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYG 233


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 174/616 (28%), Positives = 293/616 (47%), Gaps = 68/616 (11%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFH--HILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
           ++P   L LF+ A++   +      F    +L+ L   ++ V V  +LE ++  K   P 
Sbjct: 75  RDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKC-KDLAPT 133

Query: 74  DVALS-VIQAYGKNSMPDKAL-------DVFQRMNEIFGCEA--GILCRKRQFEKAKRFL 123
             ALS V+ AY  + + ++AL       D+   + ++  C A    L ++++ E A++  
Sbjct: 134 REALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVY 193

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + ++    D YS   ++ GL K   +     + ++ + +G   N+V YN L+DG++K+
Sbjct: 194 EEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKR 253

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC----LEMWDR-------- 231
           GD  RA  +++ L M+    P   TY +MINGLCK   F       +EM +R        
Sbjct: 254 GDVERANGLFKELKMK-GFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQV 312

Query: 232 -----------------------MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
                                  + +N  E D  TY + I G C+ G V  AE +    +
Sbjct: 313 YNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAI 372

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVD 327
           + G+  + ++Y  +I  +C+ GK    F+L+  M  KG  L++V+Y  L+ GL+  G+VD
Sbjct: 373 KRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVD 432

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
            A+++ + + E+    D+  + VL+NGLCK                  +GRL+ A  L+ 
Sbjct: 433 VALTVRDKMVERGVLPDANVYNVLMNGLCK------------------KGRLSAAKLLLV 474

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M      L+A+   +L++GFI+  KL+ A  LF+    KG  P VV YN +I G CK  
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFG 534

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
              +A + V+ M +    PD  TYS +I+G  +   +  ALKL  Q +++   P+V  Y 
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LI+G C  G    A + +  M+     PN+VTY  L+    K G   KA   +  +L  
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654

Query: 568 RLRPDIISYNITLKGL 583
           R  P+ +++N  + GL
Sbjct: 655 RCIPNDVTFNYLINGL 670



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 254/542 (46%), Gaps = 24/542 (4%)

Query: 96  FQRMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           F  + + F C +   +L R R F + +  L ++  K L P   +   V+   V SG +  
Sbjct: 93  FNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNR 152

Query: 154 ALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           AL ++   ++      +V+  N L++   ++     A++++E +V     + N  +  +M
Sbjct: 153 ALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNY-SVCIM 211

Query: 213 INGLCKCGRFDECLEMW-DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           + GLCK  + +E  ++  DR  K       F Y + + G  K G+VE A  +++E+   G
Sbjct: 212 VRGLCKERKVEEGRKLINDRWGKGCIPNIVF-YNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
                 TY  MI+G C+    K    L   M  +G  +NV  YN ++   +++G   E  
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
                + E  C  D TT+  LI+G C++G +++A ++L    + G               
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G+   A  L   M + G  L+     +L++G + A +++ A+ +  +M  +G  P  
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             YN L+NGLCK  R   A   + EML +    D    + L++G  +  K+D A KL   
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL 510

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            + KG  P V  YN +I G C  G + DAL     MK  +  P+  TY+T++DG  K  D
Sbjct: 511 TIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQND 570

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
              AL+++  +++++ +P++++Y   + G C     S A +   +    G+ P  +T+ I
Sbjct: 571 LHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTI 630

Query: 614 LV 615
           L+
Sbjct: 631 LI 632



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 162/659 (24%), Positives = 265/659 (40%), Gaps = 150/659 (22%)

Query: 57  VSRILELIEIQ---KCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--- 109
           V+R LEL  I      Y P+ +A  +++ A  +    + A  V++ M +  GC       
Sbjct: 150 VNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVC 209

Query: 110 -----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE---- 160
                LC++R+ E+ ++ +N  W KG  P++  Y T+++G  K GD+  A  +F E    
Sbjct: 210 IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMK 269

Query: 161 -------------------------------MFERGVETNVVCYNILIDGFFKKGDYMRA 189
                                          M ERGV+ NV  YN ++D   K G  +  
Sbjct: 270 GFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEV 329

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE------------------------- 224
            +   R + E    P++ TYN +I+G C+ G+  E                         
Sbjct: 330 GKTL-RWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIH 388

Query: 225 -------CLEMWDR---MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
                  CL  +D    M +     D   Y + +HGL  AG V+ A  V  +MVE G+  
Sbjct: 389 VYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLP 448

Query: 275 DAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           DA  YN +++G C+ G++      L E++ +   L+      L+ G + +GK+DEA  ++
Sbjct: 449 DANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLF 508

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------E 376
           EL   K  +     +  +I G CK G +N A+  +  +++G                  +
Sbjct: 509 ELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQ 568

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
             L +A  L  +M K  CK N  T  SL+NGF +      A   F+EM   G  P VV+Y
Sbjct: 569 NDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTY 628

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL------------------ 478
             LI   CK  +  +A SF + ML     P+ +T++ LINGL                  
Sbjct: 629 TILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEI 688

Query: 479 -------------------------------CQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
                                          C  K ++ AL+L  +   KG  PD   + 
Sbjct: 689 KASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFA 748

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            L++GLC  G+ ++     S       +   V Y+  ++     G   +A ++++ +LE
Sbjct: 749 ALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLLE 807


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 70/487 (14%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P  + Y T++  LV SG +L ALA+++ M   G   N   YN+L+DG  K+G    A +
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALK 228

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +++ + ++  + PNV  Y V+++ LC  G+ DE +++   MK      D  TY +F+ GL
Sbjct: 229 MFDEM-LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 252 CKAGNV-EGAERV----------------------------------YREMVESGIFVDA 276
           CK G V E  +R+                                  Y+ M+E  I  D 
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           V Y  MI G   AG+I++     +VM +KG + +   YN +++ L ++G ++ A ++   
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + + N   DSTT  ++I GLCK G +++A+QI +E                  M +HGC 
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE------------------MGEHGCD 449

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV--------------SYNTLIN 441
               T N+L++GF +  +LE A  LF +M   G +P++               S   L++
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVH 508

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            +C+  +  +AY  ++ +++ G  PD++TY+ LINGLC+++ +D A++L  +   KG +P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   Y  LI GL  A +  DA+ L+ N+ +    P+L  YN++M  L +     +A+ +W
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 562 NHILEER 568
              L ++
Sbjct: 629 LDYLPKK 635



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 208/461 (45%), Gaps = 67/461 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            +  ++      GR  + ++ + RM + +    +F Y + +  L  +G +  A  +Y  M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           V +G   +  TYN ++DG C+ G   +  ++++ M  +G + NV  Y +L+  L   GK+
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           DEA+ +   +++K C  D  T+   ++GLCK G +N+A Q L  +++GG           
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG----------- 307

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                    L  Y+C  L++G  QA + +     +K M  +  SP VV Y  +I G  + 
Sbjct: 308 -----FALGLKGYSC--LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A SF+  M +KG+ PD   Y+ ++  LC    ++ A  L  + LQ     D T  
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD----------- 555
            I+I GLC  G V++A+Q++  M +  C P ++TYN L+DG ++ G  +           
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 556 -------------------------------------KALEIWNHILEERLRPDIISYNI 578
                                                KA ++   I++  + PD+++YN 
Sbjct: 481 GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            + GLC    +  A     +   +GI P  IT+  L+  ++
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 19/354 (5%)

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDE 328
           +G+   +  + A++     AG+  +  + +  M   +       YN +++ L+++G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A++++  +    C  +  T+ VL++GLCK G    A+++ +E                  
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE------------------ 232

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   N      L++    A K++ A+ L   M  KGC P  V+YN  ++GLCKV R
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA+  +  + + G+   +  YS LI+GL Q+++ D         L++  +PDV +Y I
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I G   AG++EDAL     MKK+  VP+   YNT++  L   GD ++A  + + +L+  
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L  D  +  I + GLC    + +A +  ++    G  PT +T++ L+      G
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 209/458 (45%), Gaps = 39/458 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C    L + R+F++   +  ++ E+ + PDV  Y  +I G  ++G +  AL+  D M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G   +  CYN ++      GD  RA  +   + ++ ++  +  T  +MI GLCK G  
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM-LQNNLVLDSTTQTIMICGLCKRGLV 433

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV---ESGIFV----- 274
           DE ++++D M ++  +    TY + I G  + G +E A  ++ +M       +F+     
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLG 493

Query: 275 -----DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
                D+ +   ++   C++G++ + ++L   +   G + +VV+YN LI GL +   +D 
Sbjct: 494 ANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDG 553

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A+ +++ L+ K  + D  T+G LI+GL +    N A+ +   + + G    + + S+ N 
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS---SPSLSIYNS 610

Query: 389 MDKHGCKLNAYT-------------------CNSLMNGF--IQASKLENAIFLFKEMSRK 427
           M +  C++   +                      L N    I+   L++ +    ++ ++
Sbjct: 611 MMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQE 670

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
             S +   Y   + GLC+V R  +A      + E G        +LLIN LC  + ++ A
Sbjct: 671 YGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           + +    L K       + N L+  LC   + +DA  L
Sbjct: 731 VDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 262/538 (48%), Gaps = 80/538 (14%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVING  K+G +  A  + DEM ERGV+ +V+ ++ LI G  +KG    A E ++ + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-----EKDSFTYCSFIHGLC 252
            E S  PNV+TYN ++NGLCK  R DE LE++D M+K        E D  +Y + I  LC
Sbjct: 62  EECS--PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC------------------------- 287
           KA  V+ A   ++ M   G   + VTY+++IDG C                         
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 288 ----------RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELL 336
                     R GK  EC EL   M  KG  +N++ +N ++  L +N + ++A   +E L
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
            +     +  T+ V ++GLCK G +++A +IL E+ E                       
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK------------------VTP 281

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  T +S+++GF +A +++ A  +F  M    C P  V++ TL++G  + ++  EA+   
Sbjct: 282 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 341

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           ++M+  G+ P + TY++L++ +C +  ++ AL++  +  +K   PD   Y  LI  LC A
Sbjct: 342 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRA 401

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE---------- 566
            +V++A +    M+  N VPN    + L++ L K G+ D+A  + ++++E          
Sbjct: 402 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEA 461

Query: 567 ---------ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                    + +RPD  +Y   L+ LC   R+  A         RG  P  +T+ +L+
Sbjct: 462 VEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLI 519



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 224/437 (51%), Gaps = 24/437 (5%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  +ING CK G+ D+  E+ D MK+   + D   + + I GLC+ G ++ A   ++ M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK-----GC-LNVVSYNILIRGLLE 322
           E     + +TYN +++G C+A +I E  EL++ M ++     GC  +V+SY+ +I  L +
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-------------- 368
             +VD+A   ++ +R   C  +  T+  LI+GLCK   +++A  +L              
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 369 -NEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            N V  G   +G+ ++   L+  M + G  +N    N++++   +  + E A   F+ + 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           + G  P VV+YN  ++GLCK  +  EAY  + EM+E    PD+ITYS +I+G C++ ++D
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +  + +     P    +  L+HG     K  +A +++ +M     +P L TYN LM
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D +      + ALEI++ +  ++ +PD  +Y   ++ LC   R+ +A EFL+      ++
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420

Query: 606 PTTITWHILVRAVMNNG 622
           P     H LV  +   G
Sbjct: 421 PNGAICHALVEVLCKQG 437



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 204/443 (46%), Gaps = 48/443 (10%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +VI A  K    DKA + F+RM  + GC   +         LC+  + ++A   L  L  
Sbjct: 113 TVIDALCKAQRVDKAYEYFKRMRAV-GCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKG 171

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           + + P    Y  V+NG  + G     L +   M E+G   N++ +N ++   +K  +  +
Sbjct: 172 EDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEK 231

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A + +ERL +++   PNVVTYNV ++GLCK G+ DE   +   M +++   D  TY S I
Sbjct: 232 ACQFFERL-LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSII 290

Query: 249 HGLCKAGNVEGAE-----------------------------------RVYREMVESGIF 273
            G CKAG ++ A+                                   RV+ +MV +G  
Sbjct: 291 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 350

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
               TYN ++D  C A  ++   E++  M RK    +  +Y  LI+ L    +VDEA   
Sbjct: 351 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEF 410

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-NEVEEGGEGRLADAASLVNRMDK 391
            +++   N   +      L+  LCK G +++A  +L N VE    G   +A  ++ +M  
Sbjct: 411 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVL 470

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  T  +++       ++++AI  F++M+ +GC+P +V+Y  LI   C  +   +
Sbjct: 471 KGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADD 530

Query: 452 AYSFVKEMLEKGWKPDMITYSLL 474
           A+   + M+  G+ P   T   L
Sbjct: 531 AFRIFEAMVAAGFTPQAQTMRTL 553



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 6/119 (5%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           MY  +I+G C AG+V+ A +L   MK+R    +++ ++TL+ GL + G  D+ALE +  +
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR-----GILPTTITWHILVRAV 618
            EE   P++I+YN  + GLC  +R+ +  E  +D   R     G  P  I++  ++ A+
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 270/540 (50%), Gaps = 24/540 (4%)

Query: 99  MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           M ++  C + +   CR  +  +A      ++E GL P+  SY T+IN L KSG ++ A  
Sbjct: 353 MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 412

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +  +M  RG+  ++V    ++DG FK G    A+E++E  +++ ++ PN VTY+ +++G 
Sbjct: 413 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET-ILKLNLAPNCVTYSALLDGY 471

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G+ +    +  +M+K     +  T+ S I+G  K G +  A  V REMV+  +  + 
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 277 VTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           + Y  +IDG+ +AG+     +   E+  R+   + V ++IL+  L   G++DEA S+   
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 591

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG--------------GEGRLA- 380
           +  K  + D   +  LI+G  K G    A+ I+ E++E               G  RL  
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651

Query: 381 -DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            D   + +RM + G   +  T N+++N +    K E+A+ +  EM   G  P  V+YN L
Sbjct: 652 YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I GLCK     +A S + EML   + P  IT+  L+    +S+K D  L++  + +  G 
Sbjct: 712 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 771

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
              +T+YN LI   C  G    A  +   M KR    +LVTYN L+ G       +KAL+
Sbjct: 772 ELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 831

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCS----RMSDAFEFLNDALCRGILPTTITWHILV 615
            ++ +  + + P+I +YN  L GL +       M +  + +++   RG++P   T+ ILV
Sbjct: 832 TYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 251/532 (47%), Gaps = 38/532 (7%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR    + A+  + +L + G+  DV    T+I+G  ++G +  A  + +  +   V+ ++
Sbjct: 208 CRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDI 267

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL---------------VMETSV---YPNVVTYNVM 212
           V YN L+  F K GD  RA+ ++  +               V +  +    P +VTY  +
Sbjct: 268 VTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTL 327

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I   CK    +E   ++ +M  N    D  T  S ++G C+ G +  A  ++REM E G+
Sbjct: 328 IAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGL 387

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAIS 331
             + V+Y  +I+   ++G++ E F L   M  +G   ++V+   ++ GL + GK  EA  
Sbjct: 388 DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEE 447

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           ++E + + N   +  T+  L++G CK                   G++  A  ++ +M+K
Sbjct: 448 VFETILKLNLAPNCVTYSALLDGYCK------------------LGKMELAELVLQKMEK 489

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T +S++NG+ +   L  A+ + +EM ++   P  + Y  LI+G  K      
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  F KEM  +  +   + + +L+N L +  ++D A  L      KG  PD+  Y  LI 
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G    G    AL +   MK++N   ++V YN L+ GL + G  D    + + ++E  L P
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAP 668

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           D I+YN  +   C   +  DA + LN+    GI+P  +T++IL+  +   GA
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 242/527 (45%), Gaps = 53/527 (10%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F  A    + +   GL P +  + T++     SG +     ++ +M   GV  +V   N
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 175 ILIDGFFKKGD------YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +L+    K GD      Y+R  ++         V  + VTYN +I G C+ G  D+   +
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDV---------VDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M K     DS T    + G C+ G V+ AE V   +V+ G+  D +  N +IDG+C 
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELL---------- 336
           AG + +  EL E   R    +++V+YN L++   + G +  A S++ E+L          
Sbjct: 245 AGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 337 --------REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
                     KN      T+  LI   CK             VEE        + SL  +
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCK----------FVGVEE--------SHSLYKK 346

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M  +G   +  TC+S++ GF +  KL  A  LF+EM   G  P  VSY T+IN L K  R
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA++   +M+ +G   D++T + +++GL +  K   A ++    L+    P+   Y+ 
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+ G C  GK+E A  +   M+K +  PN++T++++++G  K G   KA+++   +++  
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P+ I Y I + G         A +F  +   R +  + + + IL+
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILL 573



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 220/458 (48%), Gaps = 36/458 (7%)

Query: 66  IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           +Q+   P  +  ++ I  Y K    D A D  + M        N IF      L R  + 
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A+  +  ++ KG+ PD+ +Y ++I+G  K G+ L AL++  EM E+ +  +VV YN L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  + G Y   + +  R++ E  + P+ +TYN +IN  C  G+ ++ L++ + MK   
Sbjct: 643 IKGLLRLGKY-DPRYVCSRMI-ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              ++ TY   I GLCK G VE AE    EM+        +T+  ++  + R+ K  +  
Sbjct: 701 IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 760

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           ++ E +   G  L++  YN LI      G   +A  + + + ++  +AD  T+  LI G 
Sbjct: 761 QIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 820

Query: 356 CKNGYLNKAIQILNEVEEGG-----------EGRLADAA----------SLVNRMDKHGC 394
           C   ++ KA++  +++   G            G L++A            LV+ M++ G 
Sbjct: 821 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 880

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             NA T + L++G+ +    +  I L  EM  KG  PT+ +YN LI+   K  +  EA  
Sbjct: 881 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARE 940

Query: 455 FVKEMLEKGWKPDMITYSLLING---LCQSKKIDMALK 489
            + ++L KG  P+  TY +L  G   L    +ID +LK
Sbjct: 941 LLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLK 978



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 6/225 (2%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L+  ++   +   A   F  M   G  PT+  +NTL+          +      +ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV--TMYNILIHGLCSAGKVE 520
           G  PD+ + ++L++ LC+   +D+AL     +L+     D+    YN +I G C  G V+
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLAL----GYLRNNDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
               L S M KR    + +T N L+ G  + G    A  +  ++++  +  D+I  N  +
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            G C    MS A E + ++    +    +T++ L++A    G  T
Sbjct: 240 DGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 254/524 (48%), Gaps = 28/524 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER--- 164
           G+   KR  +     L  + E    PDV+S   ++ GL        AL +   M +    
Sbjct: 131 GLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGG 190

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G   +VV Y  +I+GFFK+GD  +A   +  + ++  + P+VVTY+ +I  LCK    D+
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEM-LDRRISPDVVTYSSIIAALCKGQAMDK 249

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA----ERVYREMVE-SGIFVDAVTY 279
            +E+   M KN    +  TY S +HG C +G  + A    ++V  + VE  G+  D  TY
Sbjct: 250 AMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATY 309

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ G+   G +     L ++M R G   +   YNILI    + GKVDEA+ ++  +R+
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +  N D+ T+G +I  LCK+G                  R+ DA     +M   G     
Sbjct: 370 QGLNPDAVTYGAVIGILCKSG------------------RVEDAMLYFEQMIDEGLSPGN 411

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              NSL++G    +K E A  L  EM  +G     + +N++I+  CK  R  E+      
Sbjct: 412 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+  G KPD+ITYS LI+G C + K+D A+KL    +  G  P+   Y  LI+G C   +
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           + DAL L+  M+     P+++TYN ++ GLF+T     A E++  I E   + ++ +YNI
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L GLC      DA     +     +     T++I++ A++  G
Sbjct: 592 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 635



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 263/522 (50%), Gaps = 36/522 (6%)

Query: 92  ALDVFQR-------MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK---GLKPDVYSYG 139
           A+D+  R       M ++F C   +  LC + + ++A    + + +    G  PDV SY 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYT 200

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           TVING  K GD   A + + EM +R +  +VV Y+ +I    K     +A E+   +V +
Sbjct: 201 TVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV-K 259

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF-----TYCSFIHGLCKA 254
             V PN  TY  +++G C  G+  E +    +++ +  E D       TYC+ + G    
Sbjct: 260 NGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK 319

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G + G   +   MV +GI  D   YN +I  + + GK+ E   ++  M ++G   + V+Y
Sbjct: 320 GALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTY 379

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             +I  L ++G+V++A+  +E + ++  +  +  +  LI+GLC      +A +++ E+ +
Sbjct: 380 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 439

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                 EGR+ ++  L + M + G K +  T ++L++G+  A K++ 
Sbjct: 440 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 499

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ L   M   G  P  V+Y TLING CK+ R G+A    KEM   G  PD+ITY++++ 
Sbjct: 500 AMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQ 559

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL Q+++   A +L  +  + G   +++ YNI++HGLC     +DAL+++ N+   +   
Sbjct: 560 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL 619

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
              T+N ++D L K G   +A +++       L P+  +Y +
Sbjct: 620 EARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 235/495 (47%), Gaps = 17/495 (3%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P V++Y  +I    ++  L    A    + ++G     + +  L+ G         A 
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM---KKNEREKDSFTYCSF 247
           +I  R + E S  P+V +  +++ GLC   R  E LE+   M   +      D  +Y + 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+G  K G+   A   Y EM++  I  D VTY+++I   C+   + +  E+   M + G 
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + N  +Y  ++ G   +G+  EAI   + +R      D     +        GY  K   
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK--- 319

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     G L    +L++ M ++G   + Y  N L+  + +  K++ A+ +F +M +
Sbjct: 320 ----------GALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G +P  V+Y  +I  LCK  R  +A  + ++M+++G  P  I Y+ LI+GLC   K + 
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +L  + L +G   +   +N +I   C  G+V ++ +L+  M +    P+++TY+TL+D
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G    G  D+A+++ + ++   L+P+ ++Y   + G C  SRM DA     +    G+ P
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549

Query: 607 TTITWHILVRAVMNN 621
             IT++I+++ +   
Sbjct: 550 DIITYNIILQGLFQT 564



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 247/528 (46%), Gaps = 29/528 (5%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           + G A+S   +H +L R I P +V + S I  L + Q      D A+ V+ +  KN +  
Sbjct: 211 DSGKAYST--YHEMLDRRISPDVVTYSSIIAALCKGQAM----DKAMEVLTSMVKNGVMP 264

Query: 91  KALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                   M+    C +G       F K  R  + +   GL+PD+ +Y T++ G    G 
Sbjct: 265 NCRTYTSIMHGY--CSSGQPKEAIGFLKKVRS-DGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           L+G  A+ D M   G+  +   YNILI  + K+G    A  ++ ++  +  + P+ VTY 
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM-RQQGLNPDAVTYG 380

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I  LCK GR ++ +  +++M        +  Y S IHGLC     E AE +  EM++ 
Sbjct: 381 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 440

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           GI ++ + +N++ID  C+ G++ E  +L+++M R G   ++++Y+ LI G    GK+DEA
Sbjct: 441 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 500

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + +   +       ++ T+  LING CK                    R+ DA  L   M
Sbjct: 501 MKLLSGMVSVGLKPNTVTYRTLINGYCKIS------------------RMGDALVLFKEM 542

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           +  G   +  T N ++ G  Q  +   A  L+  ++  G    + +YN +++GLCK +  
Sbjct: 543 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 602

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A    + +     K +  T++++I+ L +  +   A  L   F   G  P+   Y ++
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
              +   G +E+  QL+ +M+   C  +    N ++  L + G+  +A
Sbjct: 663 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 128/249 (51%), Gaps = 8/249 (3%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC---SPTVVSYN 437
           DA  + + + + G   + Y  N  +    + S    A+  +  M+R G    +PTV +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI   C+ +R    ++ +  +++KG++ + IT++ L+ GLC  K+   A+ +  + + +
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 498 -GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM---KKRNCVPNLVTYNTLMDGLFKTGD 553
               PDV    IL+ GLC   + ++AL+L   M   +     P++V+Y T+++G FK GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             KA   ++ +L+ R+ PD+++Y+  +  LC    M  A E L   +  G++P   T+  
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 614 LVRAVMNNG 622
           ++    ++G
Sbjct: 272 IMHGYCSSG 280



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 36/253 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKP+  +Y T+ING  K   +  AL +F EM   GV  ++
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLV-----METSVYPNVV------------------ 207
           + YNI++ G F+      AKE++ R+      +E S Y N++                  
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY-NIILHGLCKNKLTDDALRMFQ 610

Query: 208 ------------TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                       T+N+MI+ L K GR  E  +++     N    + +TY      +   G
Sbjct: 611 NLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 670

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            +E  ++++  M ++G  VD+   N ++    + G+I        ++  K      S   
Sbjct: 671 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS 730

Query: 316 LIRGLLENGKVDE 328
           L   LL  GK  E
Sbjct: 731 LFIDLLSGGKYQE 743


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 244/464 (52%), Gaps = 20/464 (4%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F + L +K   P +  +G ++  LVK+      +++  +M   G+ +N+V  +ILI+ F 
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G    +  ++   +++    P+ +T   +I GLC  G   + L   D++     + + 
Sbjct: 116 QLGHNSLSFSVFSN-ILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQ 174

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
            +Y + I+GLCK G  + A  + R +    + +D V YN +IDG C+   + + F+ + E
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ ++ C  VV+YN LI GL   G++ +AI +   +  +N N    T  +L++  CK   
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCK--- 291

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG++ +A ++   M K   K N  T NSLMNG+   +++  A  +
Sbjct: 292 ---------------EGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  M++ G +P V SY+ +I+G CK++   EA    +EM  K   PD++TY+ LI+GLC+
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           S +I  ALKL  +   +G  P++  YN L+  LC    V+ A++L + +K  N  P++ T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           YN L++GL K+G    A +++  +L      D+ +YN  +KG C
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 235/487 (48%), Gaps = 19/487 (3%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY +  N       L   ++ F+ +  +   T  +     I G   K ++        R 
Sbjct: 35  SYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQ 94

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +    +  N+VT +++IN   + G       ++  + K   E D+ T  + I GLC  G+
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNI 315
           +  A   + +++  G  ++ V+Y  +I+G C+ G+ K   E L  + G+   L+VV YN 
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G+ ++  V++A   +  +  K       T+  LI GLC                   
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCI------------------ 256

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G+L DA  L+++M         YT + L++ F +  K++ A  +F  M +K   P +V+
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN+L+NG C V    +A S    M + G  PD+ +YS++I+G C+ K +D A+KL  +  
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            K   PDV  YN LI GLC +G++  AL+L   M  R   PN++TYN+L+D L K    D
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KA+E+   + +  ++P + +YNI + GLC   R+ DA +   D L  G      T++ ++
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496

Query: 616 RAVMNNG 622
           +     G
Sbjct: 497 KGFCKKG 503



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 228/451 (50%), Gaps = 20/451 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L +   +         +   G+  ++ +   +IN   + G    + +VF  + 
Sbjct: 72  FGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNIL 131

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G E + +    LI G   KGD  +A    ++ V+      N V+Y  +INGLCK G+ 
Sbjct: 132 KKGYEPDAITLTTLIKGLCLKGDIHKALHFHDK-VLALGFQLNQVSYRTLINGLCKVGQT 190

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              LEM  R+       D   Y + I G+CK   V  A   Y EMV   I    VTYN +
Sbjct: 191 KAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTL 250

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G C  G++K+   L   M  +     V +++IL+    + GKV EA +++ ++ +K+ 
Sbjct: 251 ICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDV 310

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  T+  L+NG C          ++NEV +        A S+ N M + G   + ++ 
Sbjct: 311 KPNIVTYNSLMNGYC----------LVNEVNK--------AESIFNTMAQIGVAPDVHSY 352

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + +++GF +   ++ A+ LF+EM  K   P VV+YN+LI+GLCK  R   A   + EM +
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G  P++ITY+ L++ LC++  +D A++L  +       P V  YNILI+GLC +G+++D
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           A +++ ++       ++ TYNT++ G  K G
Sbjct: 473 AQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 205/401 (51%), Gaps = 26/401 (6%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            +++ +KG +PD  +  T+I GL   GD+  AL   D++   G + N V Y  LI+G  K
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A E+  R+  +  V  +VV YN +I+G+CK    ++  + +  M          
Sbjct: 187 VGQTKAALEMLRRIDGKL-VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY + I GLC  G ++ A  +  +M+   I     T++ ++D FC+ GK+KE   ++ VM
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            +K    N+V+YN L+ G     +V++A SI+  + +     D  ++ ++I+G CK   +
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMV 365

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL---NAYTCNSLMNGFIQASKLENAI 418
           ++A+++  E+                      CK    +  T NSL++G  ++ ++  A+
Sbjct: 366 DEAMKLFEEMH---------------------CKQIFPDVVTYNSLIDGLCKSGRISYAL 404

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  EM  +G  P +++YN+L++ LCK     +A   + ++ +   +P + TY++LINGL
Sbjct: 405 KLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           C+S ++  A K+    L  G+  DV  YN +I G C  G V
Sbjct: 465 CKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 94/176 (53%), Gaps = 9/176 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +KA  +F  M +I        +       C+ +  ++A +    +  K + PDV +Y ++
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+GL KSG +  AL +  EM +RG   N++ YN L+D   K     +A E+  +L  + +
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL-KDHN 449

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           + P+V TYN++INGLCK GR  +  ++++ +  N    D +TY + I G CK G V
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 70/487 (14%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P  + Y T++  LV SG +L ALA+++ M   G   N   YN+L+DG  K+G    A +
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALK 228

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +++ + ++  + PNV  Y V+++ LC  G+ DE +++   MK      D  TY +F+ GL
Sbjct: 229 MFDEM-LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 252 CKAGNV-EGAERV----------------------------------YREMVESGIFVDA 276
           CK G V E  +R+                                  Y+ M+E  I  D 
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           V Y  MI G   AG+I++     +VM +KG + +   YN +++ L ++G ++ A ++   
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + + N   DSTT  ++I GLCK G +++A+QI +E                  M +HGC 
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE------------------MGEHGCD 449

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV--------------SYNTLIN 441
               T N+L++GF +  +LE A  LF +M   G +P++               S   L++
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            +C+  +  +AY  ++ +++ G  PD++TY+ LINGLC+++ +D A++L  +   KG +P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   Y  LI GL  A +  DA+ L+ N+ +    P+L  YN++M  L +     +A+ +W
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 562 NHILEER 568
              L ++
Sbjct: 629 LDYLPKK 635



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 67/461 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            +  ++      GR  + ++ + RM + +    +F Y + +  L  +G +  A  +Y  M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           V +G   +  TYN ++DG C+ G   +  ++++ M  +G + NV  Y +L+  L   GK+
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           DEA+ +   +++K C  D  T+   ++GLCK G +N+A Q L  +++GG           
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG----------- 307

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                    L  Y+C  L++G  QA + +     +K M  +  SP VV Y  +I G  + 
Sbjct: 308 -----FALGLKGYSC--LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A SF+  M +KG+ PD   Y+ ++  LC    ++ A  L  + LQ     D T  
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD------------- 553
            I+I GLC  G V++A+Q++  M +  C P ++TYN L+DG ++ G              
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 554 -----------------CD------------------KALEIWNHILEERLRPDIISYNI 578
                            CD                  KA ++   I++  + PD+++YN 
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            + GLC    +  A     +   +GI P  IT+  L+  ++
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 19/354 (5%)

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDE 328
           +G+   +  + A++     AG+  +  + +  M   +       YN +++ L+++G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A++++  +    C  +  T+ VL++GLCK G    A+++ +E                  
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE------------------ 232

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   N      L++    A K++ A+ L   M  KGC P  V+YN  ++GLCKV R
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA+  +  + + G+   +  YS LI+GL Q+++ D         L++  +PDV +Y I
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I G   AG++EDAL     MKK+  VP+   YNT++  L   GD ++A  + + +L+  
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L  D  +  I + GLC    + +A +  ++    G  PT +T++ L+      G
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 209/462 (45%), Gaps = 39/462 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C    L + R+F++   +  ++ E+ + PDV  Y  +I G  ++G +  AL+  D M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G   +  CYN ++      GD  RA  +   + ++ ++  +  T  +MI GLCK G  
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM-LQNNLVLDSTTQTIMICGLCKRGLV 433

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV---ESGIFV----- 274
           DE ++++D M ++  +    TY + I G  + G +E A  ++ +M       +F+     
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLG 493

Query: 275 -----DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
                D+ +   ++   C++G++ + ++L   +   G + +VV+YN LI GL +   +D 
Sbjct: 494 ANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDG 553

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A+ +++ L+ K  + D  T+G LI+GL +    N A+ +   + + G    + + S+ N 
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS---SPSLSIYNS 610

Query: 389 MDKHGCKLNAYT-------------------CNSLMNGF--IQASKLENAIFLFKEMSRK 427
           M +  C++   +                      L N    I+   L++ +    ++ ++
Sbjct: 611 MMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQE 670

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
               +   Y   + GLC+V R  +A      + E G        +LLIN LC  + ++ A
Sbjct: 671 YGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           + +    L K       + N L+  LC   + +DA  L   M
Sbjct: 731 VDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRM 772


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 260/531 (48%), Gaps = 27/531 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+    + AK F   + + GL PDVYSY  +++GL  +G +  AL   ++M   GVE +
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YNIL +GF   G    A ++ +R+++   + P++VTY ++I G C+ G  +E  ++ 
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLL-NGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M     +    TY   +  LCK+G ++ A  +  EM   G+  D +TY+         
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR-------- 450

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E  EL+E M  K    N    + +I GL E G + EA   ++ + + +   +   +
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            ++I+G  K G + +A++   ++ E G                 +G+LA+A  L++ +  
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG    + T  +LMNG+ +   + +   +  EM  K   PT ++Y  ++ GLCK  R  E
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           +   +K M  +G  PD ITY+ +I   C++  +  A +L  Q LQ    P    YN+LI+
Sbjct: 631 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 690

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC  G ++DA +L   ++ ++     V Y T++      GD   AL  ++ ++E     
Sbjct: 691 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 750

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I  Y+  +  LC  + ++DA  F    L  GI P      +++ A   +G
Sbjct: 751 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSG 801



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 268/553 (48%), Gaps = 20/553 (3%)

Query: 82  AYGKNSMPDKALDVFQRMNEI-----FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           AY +  M   AL V  +M  +           +L   R  +      N +   G+  + Y
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEY 236

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +   +I+GL +   L  A+    E        +VV +N L+ GF K G    AK  +  +
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF-CM 295

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +++  + P+V +YN++++GLC  G  +E LE  + M+ +  E D  TY    +G    G 
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           + GA +V + M+ +G+  D VTY  +I G C+ G I+E F+L E M  +G  L++V+Y +
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGV--------LINGLC-KNGYLNKAI- 365
           L+  L ++G++DEA+ +   +       D  T+          L   +C K  Y N  + 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 366 -QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
             I++ + E  +G +++A    + + K          N +++G+ +   +  A+  +K++
Sbjct: 476 SAIISGLFE--KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             KG SPT+V++N+LI G CK  +  EA   +  +   G  P  +TY+ L+NG C+   +
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                +  +   K   P    Y +++ GLC  G++ +++QL   M  R   P+ +TYNT+
Sbjct: 594 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 653

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +    K  D  KA ++ N +L+  L+P  ++YN+ + GLC    + DA   L     + I
Sbjct: 654 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 713

Query: 605 LPTTITWHILVRA 617
             T + +  +++A
Sbjct: 714 RLTKVAYTTIIKA 726



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 231/507 (45%), Gaps = 46/507 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     E+A  F N +   G++PD+ +Y  + NG    G + GA  V   M   G+  +
Sbjct: 315 LCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPD 374

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC---- 225
           +V Y ILI G  + G+   + ++ E++ +   +  ++VTY V+++ LCK GR DE     
Sbjct: 375 LVTYTILICGHCQMGNIEESFKLKEKM-LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL 433

Query: 226 -----------------------LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
                                  +E+++ M       +SF   + I GL + G +  A+ 
Sbjct: 434 HEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLL 321
            +  + +S +  + + YN MIDG+ + G I E    ++ +  KG    +V++N LI G  
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 553

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------ 375
           + GK+ EA+ + + ++       S T+  L+NG C+ G ++    +L+E+E         
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 376 -----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      EGRL ++  L+  M   G   +  T N+++  F +A  L+ A  L  +M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            +    P+ V+YN LINGLC      +A   +  + ++  +   + Y+ +I   C    +
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 733

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             AL    Q +++GF   +  Y+ +I+ LC    + DA   +  M      P+      +
Sbjct: 734 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVM 793

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRP 571
           ++   ++GD +   EI+  +++  L P
Sbjct: 794 LNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 160/330 (48%), Gaps = 35/330 (10%)

Query: 327 DEAISIWELLR-EKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRLADAAS 384
           D A+ +++LLR E        +  ++ + + + G   +  ++LN+ VEE G G       
Sbjct: 96  DSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCE 155

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL----- 439
           L+    +    LN    + L   + +A  + +A+F+  +M       ++ +YN+L     
Sbjct: 156 LLCNSFR-DWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLR 214

Query: 440 ---------------------------INGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
                                      I+GLC+  R  +A +F++E   + + P +++++
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L++G C+   +D+A    C  ++ G  PDV  YNIL+HGLC AG +E+AL+  ++M+  
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH 334

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++VTYN L +G    G    A ++   +L   L PD+++Y I + G C    + ++
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
           F+     L +G+  + +T+ +L+ ++  +G
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSG 424



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +  ++ + L  ++ +GL PD  +Y TVI    K+ DL  A  + ++M +  ++ +
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+LI+G    G+   A  +   L  + S+    V Y  +I   C  G     L  +
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTL-QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 740

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M +   E     Y + I+ LCK   +  A+  +  M+  GI  D      M++ F R+
Sbjct: 741 HQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRS 800

Query: 290 GKIKECFELWEVMGRKGCLNV 310
           G     FE++ +M + G L V
Sbjct: 801 GDPNSVFEIFAMMIKCGLLPV 821



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 8/202 (3%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE--KGWKPDMITYSLLINGLCQS 481
           ++RKG S  +     ++N + + E  G A S  + +    + W  + + + +L     ++
Sbjct: 125 VARKGQSKEL---RRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRA 181

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           + +  AL +  +         +  YN L++ L     + D   +Y+ +K      N  T 
Sbjct: 182 EMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEYTN 238

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+DGL +      A+        E   P ++S+N  + G C    +  A  F    + 
Sbjct: 239 PILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIK 298

Query: 602 RGILPTTITWHILVRAVMNNGA 623
            G+LP   +++IL+  +   G+
Sbjct: 299 YGLLPDVYSYNILLHGLCVAGS 320


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/637 (25%), Positives = 294/637 (46%), Gaps = 78/637 (12%)

Query: 36  HSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDV 95
           H+ ++F+H+LR+   P +  + +                    +I  Y +N   DKAL V
Sbjct: 345 HAHYVFNHMLRQTFVPSVATYTT--------------------MIDGYCRNRRIDKALSV 384

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN-GLVKS------ 148
              M +I G          +  KAK+ L S+ E G+ PD+ +Y  +IN G++        
Sbjct: 385 LSEM-QITGVMPS------EISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQ 437

Query: 149 ------------------------GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
                                   G+++ A  V+D M   G   NV  Y  L+ G  + G
Sbjct: 438 YMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGG 497

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
             ++AK+ +   +++     +  T+N ++ G+CK G  DE L++ ++M KN    D  TY
Sbjct: 498 HLVQAKQ-FMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTY 556

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMG 303
              + G C+ G +  A  + + M++ G+  D V Y  +++G    G++K   +   E++ 
Sbjct: 557 TILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIIC 616

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           ++G   + ++YN L+ G L+ G ++    +   + +     +S ++ +L++G  K G  +
Sbjct: 617 KEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFS 676

Query: 363 KAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           K++ +   +   G                  G +  A   + +M   G   +    + L+
Sbjct: 677 KSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILI 736

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
             F + SK+ NA+ LF  M     SP+  +Y+ +INGL +     +++  ++EML+ G +
Sbjct: 737 TAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQ 796

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+   Y  L+N  C+  KID A +L  +    G  P     + +I GLC  GK+E+A+ +
Sbjct: 797 PNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIV 856

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +S M +   VP + T+ TLM  L K      AL +   +   RL+ D++SYN+ + GLC 
Sbjct: 857 FSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCK 916

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             R+SDA +   +   +G+ P   T+  L  A+ + G
Sbjct: 917 DKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTG 953



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 273/582 (46%), Gaps = 52/582 (8%)

Query: 76  ALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
           AL V++   ++S+P    D++      +      LCR ++  +A   L  + +  L PD 
Sbjct: 276 ALCVLEDMERDSIPA---DIYT-----YNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDE 327

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK------------- 182
            +Y T+ING    G +  A  VF+ M  +    +V  Y  +IDG+ +             
Sbjct: 328 CTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSE 387

Query: 183 -------KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
                    +  +AK+I + + +E  + P++VTY+ +IN     G   E       M + 
Sbjct: 388 MQITGVMPSEISKAKQILKSM-LEDGIDPDIVTYSALINE----GMITEAEHFRQYMSRM 442

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           +   DS ++   I   C  GN+  A  VY  MV  G   +  TY  ++ G C+ G + + 
Sbjct: 443 KISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 502

Query: 296 FE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            + ++ ++     ++  ++N L+ G+ + G +DEA+ + E + + NC  D  T+ +L++G
Sbjct: 503 KQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSG 562

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD-KHGCKL 396
            C+ G +  A+ +L  + + G                 EG++  A+ +   +  K G   
Sbjct: 563 FCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYA 622

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +    NSLMNG+++   +     +  +M +    P   SYN L++G  K  +F ++    
Sbjct: 623 DCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLY 682

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           K M+ KG +PD +TY LLI GL +   ID+A+K   + + +G  PD  +++ILI      
Sbjct: 683 KYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEK 742

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
            K+ +ALQL++ MK     P+  TY+ +++GL +    D++ E+   +L+  L+P+   Y
Sbjct: 743 SKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHY 802

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
              +   C   ++  AF    +    GI+P  +    ++R +
Sbjct: 803 IALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGL 844



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 239/535 (44%), Gaps = 45/535 (8%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL          DV +   ++N L  +G+   A  +  +M +    +N V YN ++  + 
Sbjct: 210 FLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KTCRLSNSVTYNTILHWYV 268

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           KKG +  A  + E +  + S+  ++ TYN+MI+ LC+  R      +  RM+K++   D 
Sbjct: 269 KKGRFKAALCVLEDMERD-SIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDE 327

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY + I+G    G +  A  V+  M+         TY  MIDG+CR  +I +   +   
Sbjct: 328 CTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSE 387

Query: 302 MGRKGCL---------------------NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           M   G +                     ++V+Y+ LI      G + EA    + +    
Sbjct: 388 MQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALI----NEGMITEAEHFRQYMSRMK 443

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAA 383
            + DS +   +I+  C  G + +A  + + +   G                  G L  A 
Sbjct: 444 ISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 503

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
             +  +      ++  T N+L+ G  +   L+ A+ L ++M +  C P + +Y  L++G 
Sbjct: 504 QFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGF 563

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTPD 502
           C+  +   A   ++ ML+KG  PD + Y+ L+NGL    ++  A  +  + + ++G   D
Sbjct: 564 CRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYAD 623

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L++G    G +    ++ S+M +    PN  +YN LM G  K G   K+L ++ 
Sbjct: 624 CIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYK 683

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +++ + +RPD ++Y + + GL  C  +  A +FL   +  GI P  + + IL+ A
Sbjct: 684 YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 738



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 42/271 (15%)

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREK---NCNADSTTHGVLINGLCKNGYLNKAIQI 367
           ++ N ++R L+E G   E+  +W  LRE    N   D TT  +L+N LC NG   KA  +
Sbjct: 189 IACNTILRALVEQG---ESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDM 245

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKL-NAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           L +++                     C+L N+ T N++++ +++  + + A+ + ++M R
Sbjct: 246 LQKMKT--------------------CRLSNSVTYNTILHWYVKKGRFKAALCVLEDMER 285

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
                 + +YN +I+ LC+++R   A+  +K M +    PD  TY+ LING     KI+ 
Sbjct: 286 DSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINH 345

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  +    L++ F P V  Y  +I G C   +++ AL + S M+    +P+ ++      
Sbjct: 346 AHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS------ 399

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYN 577
                    KA +I   +LE+ + PDI++Y+
Sbjct: 400 ---------KAKQILKSMLEDGIDPDIVTYS 421



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 111/235 (47%), Gaps = 1/235 (0%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           E ++ DAA  V  MD  G K +   CN+++   ++  + +      +E         V +
Sbjct: 166 ERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTT 225

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            N L+N LC    F +A   +++M +     + +TY+ +++   +  +   AL +     
Sbjct: 226 CNILLNSLCTNGEFRKAEDMLQKM-KTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDME 284

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +     D+  YNI+I  LC   +   A  L   M+K + +P+  TYNTL++G F  G  +
Sbjct: 285 RDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKIN 344

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            A  ++NH+L +   P + +Y   + G C   R+  A   L++    G++P+ I+
Sbjct: 345 HAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS 399



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 12/213 (5%)

Query: 416 NAIF--LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            AIF  L + +SR   +  VV +  L+    K  +  +A   V  M + G+K   I  + 
Sbjct: 135 TAIFTSLLRIISRFDSTNHVV-FELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNT 193

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG---KVEDALQLYSNMK 530
           ++  L +  +         + L   F  DVT  NIL++ LC+ G   K ED LQ     K
Sbjct: 194 ILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQ-----K 248

Query: 531 KRNC-VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            + C + N VTYNT++    K G    AL +   +  + +  DI +YNI +  LC   R 
Sbjct: 249 MKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRS 308

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + AF  L       ++P   T++ L+      G
Sbjct: 309 ARAFLLLKRMRKDDLIPDECTYNTLINGFFGEG 341


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 70/487 (14%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P  + Y T++  LV SG +L ALA+++ M   G   N   YN+L+DG  K+G    A +
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALK 228

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +++ + ++  + PNV  Y V+++ LC  G+ DE +++   MK      D  TY +F+ GL
Sbjct: 229 MFDEM-LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 252 CKAGNV-EGAERV----------------------------------YREMVESGIFVDA 276
           CK G V E  +R+                                  Y+ M+E  I  D 
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           V Y  MI G   AG+I++     +VM +KG + +   YN +++ L ++G ++ A ++   
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + + N   DSTT  ++I GLCK G +++A+QI +E                  M +HGC 
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE------------------MGEHGCD 449

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV--------------SYNTLIN 441
               T N+L++GF +  +LE A  LF +M   G +P++               S   L++
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            +C+  +  +AY  ++ +++ G  PD++TY+ LINGLC+++ +D A++L  +   KG +P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   Y  LI GL  A +  DA+ L+ N+ +    P+L  YN++M  L +     +A+ +W
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 562 NHILEER 568
              L ++
Sbjct: 629 LDYLPKK 635



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 67/461 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            +  ++      GR  + ++ + RM + +    +F Y + +  L  +G +  A  +Y  M
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           V +G   +  TYN ++DG C+ G   +  ++++ M  +G + NV  Y +L+  L   GK+
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           DEA+ +   +++K C  D  T+   ++GLCK G +N+A Q L  +++GG           
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG----------- 307

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                    L  Y+C  L++G  QA + +     +K M  +  SP VV Y  +I G  + 
Sbjct: 308 -----FALGLKGYSC--LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A SF+  M +KG+ PD   Y+ ++  LC    ++ A  L  + LQ     D T  
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD------------- 553
            I+I GLC  G V++A+Q++  M +  C P ++TYN L+DG ++ G              
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 554 -----------------CD------------------KALEIWNHILEERLRPDIISYNI 578
                            CD                  KA ++   I++  + PD+++YN 
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            + GLC    +  A     +   +GI P  IT+  L+  ++
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 19/354 (5%)

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDE 328
           +G+   +  + A++     AG+  +  + +  M   +       YN +++ L+++G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A++++  +    C  +  T+ VL++GLCK G    A+++ +E                  
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE------------------ 232

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   N      L++    A K++ A+ L   M  KGC P  V+YN  ++GLCKV R
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGR 292

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA+  +  + + G+   +  YS LI+GL Q+++ D         L++  +PDV +Y I
Sbjct: 293 VNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTI 352

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I G   AG++EDAL     MKK+  VP+   YNT++  L   GD ++A  + + +L+  
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           L  D  +  I + GLC    + +A +  ++    G  PT +T++ L+      G
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 209/462 (45%), Gaps = 39/462 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C    L + R+F++   +  ++ E+ + PDV  Y  +I G  ++G +  AL+  D M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G   +  CYN ++      GD  RA  +   + ++ ++  +  T  +MI GLCK G  
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM-LQNNLVLDSTTQTIMICGLCKRGLV 433

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV---ESGIFV----- 274
           DE ++++D M ++  +    TY + I G  + G +E A  ++ +M       +F+     
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLG 493

Query: 275 -----DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
                D+ +   ++   C++G++ + ++L   +   G + +VV+YN LI GL +   +D 
Sbjct: 494 ANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDG 553

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A+ +++ L+ K  + D  T+G LI+GL +    N A+ +   + + G    + + S+ N 
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS---SPSLSIYNS 610

Query: 389 MDKHGCKLNAYT-------------------CNSLMNGF--IQASKLENAIFLFKEMSRK 427
           M +  C++   +                      L N    I+   L++ +    ++ ++
Sbjct: 611 MMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQE 670

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
               +   Y   + GLC+V R  +A      + E G        +LLIN LC  + ++ A
Sbjct: 671 YGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           + +    L K       + N L+  LC   + +DA  L   M
Sbjct: 731 VDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRM 772


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 293/633 (46%), Gaps = 50/633 (7%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V++                 +A  
Sbjct: 112 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVNII----------------IANH 151

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    PDV +Y TVI+G  K GD+  A  +F EM +RG+  + V Y+ ++    K    M
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK-ARAM 270

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V PN  TYN +I G    G++ E + ++  M+++    D  T    
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
           +  LCK G ++ A  V+  M   G   +  +Y  M++G+   G + +  +L+++M   G 
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ ++N+LI+     G +D+A+ I+  +R+     D  T+  +I  LC+ G ++ A++
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             N++ + G                  G L  A  L++ +  +G  L+    +S++N   
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++ +A  +F      G  PT V Y+ L++G C V +  +A      M+  G +P+ +
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+NG C+  +ID  L L  + LQKG  P   +YNI+I GL  AG+   A   +  M
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +     N  TYN ++ GLFK    D+A+ ++  +    ++ +II+ N  + G+    R+
Sbjct: 631 TESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRV 690

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A +        G++P  +T+ I++  ++  G
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNLIKEG 723



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 250/553 (45%), Gaps = 22/553 (3%)

Query: 93  LDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
           L    R      C +G       F +A     +   + L P  ++Y  +++   ++    
Sbjct: 71  LAALARAPSSAACRSGPALAVALFNRAAS--RAQGPRVLSPTSHTYAILMDCCTRAHRPE 128

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            ALA F ++   G+  N++  N L+ GF +      A +I      E    P+V +Y+++
Sbjct: 129 LALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 188

Query: 213 INGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           +  LC  G+  +  ++   M +       D   Y + I G  K G+V  A  +++EMV+ 
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQR 248

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  D VTY++++   C+A  + +       M  KG L N  +YN LI G    G+  EA
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------------- 376
           + +++ +R  +   D  T  +L+  LCK G + +A  + + +   G+             
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368

Query: 377 ----GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G L D   L + M   G   + YT N L+  +     L+ A+ +F EM   G  P 
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           VV+Y T+I  LC++ +  +A     +M+++G  PD   Y  LI G C    +  A +L  
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS 488

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + +  G   D+  ++ +I+ LC  G+V DA  ++         P  V Y+ LMDG    G
Sbjct: 489 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVG 548

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             +KAL +++ ++   + P+ + Y   + G C   R+ +      + L +GI P+TI ++
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 608

Query: 613 ILVRAVMNNGAST 625
           I++  +   G + 
Sbjct: 609 IIIDGLFEAGRTV 621



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/617 (24%), Positives = 285/617 (46%), Gaps = 65/617 (10%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +I A  LL      K    AL +    T E G       +  +L+ L D         +L
Sbjct: 146 IIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 205

Query: 62  ELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILC 111
            ++      C  DV    +VI  + K    +KA D+F+ M +         +      LC
Sbjct: 206 RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD--------------------- 150
           + R  +KA+ FL  +  KG+ P+ ++Y  +I G   +G                      
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325

Query: 151 ----LLGALA----------VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
               L+G+L           VFD M  +G   NV  Y I+++G+  KG  +   ++++ L
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD-L 384

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++   + P++ T+NV+I     CG  D+ + +++ M+ +  + D  TY + I  LC+ G 
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNI 315
           ++ A   + +M++ G+  D   Y+ +I GFC  G + +  EL  E+M     L++V ++ 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I  L + G+V +A +I++L      +  +  + +L++G C  G + KA+++ +      
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA----- 559

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M   G + N     +L+NG+ +  +++  + LF+EM +KG  P+ + 
Sbjct: 560 -------------MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +I+GL +  R   A     EM E G   +  TY++++ GL +++  D A+ L  +  
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                 ++   N +I G+    +VE+A  L++++ +   VP +VTY+ ++  L K G  +
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 556 KALEIWNHILEERLRPD 572
           +A ++++ +      PD
Sbjct: 727 EAEDMFSSMQNAGCEPD 743



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/572 (23%), Positives = 256/572 (44%), Gaps = 45/572 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIE--------------IQKCYCPEDVALS-VIQAYG 84
           LF  +++R I P  V + S +  L +              + K   P +   + +I  Y 
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                 +A+ VF+ M                G LC+  + ++A+   +++  KG  P+V+
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++NG    G L+    +FD M   G+  ++  +N+LI  +   G   +A  I+  +
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +  V P+VVTY  +I  LC+ G+ D+ +E +++M       D + Y   I G C  G+
Sbjct: 421 -RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +  A+ +  E++ +G+ +D V ++++I+  C+ G++ +   ++++    G     V Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ G    GK+++A+ +++ +       +   +G L+NG CK G +++ + +  E+ + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR   A    + M + G  +N  T N ++ G  +    + AI
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           FLFKE+        +++ NT+I G+ +  R  EA      +   G  P ++TYS++I  L
Sbjct: 660 FLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +   ++ A  +       G  PD  + N ++  L    ++  A    S + +RN     
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 779

Query: 539 VTYNTLMDGLFKTGDCDKALEIWN---HILEE 567
           +T   L+D     G C + +       H L E
Sbjct: 780 LTTMLLVDLFSSKGTCREHIRFLPAKYHFLAE 811


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 241/493 (48%), Gaps = 22/493 (4%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER--GVETNV 170
           KR  +     L+ + E G++PD  SY TV+  L +      AL +   M ++  G   NV
Sbjct: 168 KRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNV 227

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN +I G F++G+  +A  ++  + M+  V P+VVTY  +I+ LCK    D+   +  
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEM-MQQGVVPDVVTYTSIIDALCKARAMDKAELVLR 286

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  N  + +  TY   IHG   +G  +    ++REM   G+  + VT N+ +   C+ G
Sbjct: 287 QMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHG 346

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K KE  E ++ M  KG   N+V+Y++L+ G    G   + ++++  +      AD     
Sbjct: 347 KSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFN 406

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           ++I+   K G +++ + I  +++E G                  GRLADA    N+M   
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS-PTVVSYNTLINGLCKVERFGE 451
           G K      +SL+ GF     L  A  L  EM  +G   P +V +N++IN LCK  R  E
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+     ++  G +PD+IT++ LI+G     KI+ A  +    +  G  PDV  YN LI 
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G+++D L L+  M  +   P  +TY  ++ GLF  G    A ++ + ++E     
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 572 DIISYNITLKGLC 584
           DI +  I L GLC
Sbjct: 647 DISTCGIILGGLC 659



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 275/581 (47%), Gaps = 31/581 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRM-NEIFGCEAGI---------LCRKRQFEKAK 120
           P+ ++  +V++   ++S   +ALD+   M  +  GC   +         L R+ +  KA 
Sbjct: 188 PDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKAC 247

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              + + ++G+ PDV +Y ++I+ L K+  +  A  V  +M   G + N V YN +I G+
Sbjct: 248 NLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGY 307

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
              G +     ++  +  +  + PN+VT N  ++ LCK G+  E  E +D M     + +
Sbjct: 308 SISGQWKETAGMFREMTSQ-GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPN 366

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   +HG    G       ++  M  +GI  D   +N +ID + + G + E   ++ 
Sbjct: 367 LVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFT 426

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G + +  +Y I+I      G++ +A+  +  +       +   +  LI G C +G
Sbjct: 427 QMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHG 486

Query: 360 YLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTC 401
            L KA ++++E+   G                  EGR+ +A  + + +   G + +  T 
Sbjct: 487 NLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITF 546

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NSL++G+    K+E A  +   M   G  P VVSYNTLI+G C+  R  +      EML 
Sbjct: 547 NSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLS 606

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG KP  ITY ++++GL    +   A K+C + ++ G T D++   I++ GLC     ++
Sbjct: 607 KGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDE 666

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A+ ++  +   N   N+   NT++D ++K    ++A E+++ I    L P+  +Y + +K
Sbjct: 667 AIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIK 726

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L     + +A    +     G  P++   + ++R ++  G
Sbjct: 727 NLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 210/511 (41%), Gaps = 92/511 (18%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG-AER 262
           P V TYN++++  C+  R      ++ R  K   + D       +  L  A   +     
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GC-LNVVSYNILIRG 319
           +   M E G+  D ++YN ++   C   + +   +L   M +K  GC  NVV+YN +I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L   G+V +A +++  + ++    D  T+  +I+ LCK   ++KA  +L ++   G    
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G+  + A +   M   G   N  TCNS M+   +  K + A   F 
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 423 EMSRKGCSPTVVSYNTLINGLCK-----------------------------VERFG--- 450
            M+ KG  P +V+Y+ L++G                                ++ +G   
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 451 ---EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
              E      +M E+G  PD  TY ++I    +  ++  A+    Q +  G  P+  +Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFK---------------- 550
            LI G C  G +  A +L S M  R    PN+V +N++++ L K                
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 551 -------------------TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                               G  +KA  + + ++   + PD++SYN  + G C   R+ D
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDD 596

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 + L +G+ PTTIT+ I++  + N+G
Sbjct: 597 GLILFGEMLSKGVKPTTITYGIILHGLFNDG 627



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 8/214 (3%)

Query: 417 AIFLFKEMSRKGCSP-----TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           A+ LF  + R+   P     TV +YN L++  C+  R    ++     L+ G K D+I  
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           S+L+  L  +K+ D  + L    + + G  PD   YN ++  LC   + + AL L   M 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 531 KRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           K++  C PN+VTYNT++ GLF+ G+  KA  +++ ++++ + PD+++Y   +  LC    
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARA 277

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           M  A   L   +  G  P  +T++ ++     +G
Sbjct: 278 MDKAELVLRQMISNGFQPNKVTYNCMIHGYSISG 311



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 131/255 (51%), Gaps = 2/255 (0%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + EKA   L+++   G++PDV SY T+I+G  ++G +   L +F EM  +GV+   + Y 
Sbjct: 558 KIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYG 617

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I++ G F  G  + AK++   ++ E+    ++ T  +++ GLC+    DE + M+ ++  
Sbjct: 618 IILHGLFNDGRTVGAKKMCHEMI-ESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGA 676

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + +     + I  + K    E A+ ++  +  +G+  +A TY  MI    + G ++E
Sbjct: 677 MNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEE 736

Query: 295 CFELWEVMGRKGCLNVVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              ++ +M + GC       N +IR LLE G++ +A +    +  K  + +++T  +L+ 
Sbjct: 737 ADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMA 796

Query: 354 GLCKNGYLNKAIQIL 368
              + G   + +++L
Sbjct: 797 LFSREGKYWEDVKLL 811



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 3/228 (1%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV-KE 458
           T N LM+   +  +      LF    + G    V+  + L+  L   +R  +  + +   
Sbjct: 121 TYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHR 180

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK--GFTPDVTMYNILIHGLCSA 516
           M E G +PD I+Y+ ++  LC+  +   AL L    ++K  G +P+V  YN +IHGL   
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G+V  A  L+  M ++  VP++VTY +++D L K    DKA  +   ++    +P+ ++Y
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           N  + G     +  +      +   +G++P  +T +  + ++  +G S
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 305/626 (48%), Gaps = 29/626 (4%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           IS   + +L   + +P TAL      ++ P Y HS + +  +L  LI+   V  V +I  
Sbjct: 88  ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI-R 146

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF---EKA 119
           L+ I+ C    D    +      N   D++ ++  ++  I GC   +L    +F   ++ 
Sbjct: 147 LLMIKSCDSVADTLFVLDLCRKMNK--DESFELKYKL--IIGCYNTLLNSLARFGLVDEM 202

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           K+    + E  + P++Y+Y  ++NG  K G++  A      + E G++ +   Y  LI G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMG 262

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + ++ D   A ++++ + ++     N V Y  +I+GLC   R DE ++++ +MK ++   
Sbjct: 263 YCQRKDLDSAFKVFKEMPLK-GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYP 321

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
              TY   I  LC +     A  + +EM E GI  +  TY  +ID  C   K+++  EL 
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  KG + NV++YN LI G  + G +++A+ + EL+  +N   ++ T+  LI G CK 
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR 441

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
             ++KA+ +LN++ E     L D                  T NSL++G  ++   ++A 
Sbjct: 442 N-VHKAMGVLNKMLE--RKVLPDVV----------------TYNSLIDGQCRSGNFDSAY 482

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L   M+ +G  P   +Y ++I+ LCK +R  EA      + +K   P+++ Y+ LI+G 
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++ K++ A  +  + L K   P+   +N LIHGLC+ GK+++A  L   M K +  P +
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            T   L+  L K GD D A   +  +L    +PD  +Y   ++  C   R+ DA + +  
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 599 ALCRGILPTTITWHILVRAVMNNGAS 624
               G+ P   T+  L++   + G +
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRT 688



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 167/626 (26%), Positives = 297/626 (47%), Gaps = 55/626 (8%)

Query: 39  HLFHHI-LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQ 97
           HL H + + R ID  + + V      ++   CY        +I+A   +    +AL++ +
Sbjct: 293 HLIHGLCVERRIDEAMDLFVK-----MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347

Query: 98  RMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
            M E  G +  I         LC + + EKA+  L  + EKGL P+V +Y  +ING  K 
Sbjct: 348 EMEEK-GIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G +  AL V + M  R +  N   YN LI G+ K+  + +A  +  ++ +E  V P+VVT
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKM-LERKVLPDVVT 464

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN +I+G C+ G FD    +   M       D +TY S I  LCK+  VE A  ++  + 
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLE 524

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           +  +  + V Y A+IDG+C+AGK+ E   + E M  K CL N +++N LI GL  +GK+ 
Sbjct: 525 QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLK 584

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           EA  + E + + +     +T  +LI+ L K+G  + A +   ++   G            
Sbjct: 585 EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                EGRL DA  +V +M ++G   + +T +SL+ G+    +  +A  + K M   GC 
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704

Query: 431 PTVVSYNTLINGLCKVE------------------RFGEAYSFVKEMLEKGWKPDMITYS 472
           P+  ++ +LI  L +++                   F      +++M+E G  P+  +Y 
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYE 764

Query: 473 LLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            L+ G+C+   + +A K+     QK G +P   ++N L+   C   K  +A ++  +M  
Sbjct: 765 KLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC 824

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              +P L +   L+  L+K G+ ++   ++ ++L+     D +++ I + G+     +  
Sbjct: 825 VGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEA 884

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
            +E  N     G   ++ T+ +L+  
Sbjct: 885 FYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 265/567 (46%), Gaps = 50/567 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           S+I  Y +    D A  VF+ M  + GC             LC +R+ ++A      + +
Sbjct: 258 SLIMGYCQRKDLDSAFKVFKEM-PLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKD 316

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
               P V +Y  +I  L  S     AL +  EM E+G++ N+  Y +LID    +    +
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A+E+  ++ +E  + PNV+TYN +ING CK G  ++ L++ + M+      ++ TY   I
Sbjct: 377 ARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            G CK  NV  A  V  +M+E  +  D VTYN++IDG CR+G     + L  +M  +G +
Sbjct: 436 KGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +  +Y  +I  L ++ +V+EA  +++ L +K+   +   +  LI+G CK G +N+A  +
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L                   +M    C  N+ T N+L++G     KL+ A  L ++M + 
Sbjct: 555 LE------------------KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI 596

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              PTV +   LI+ L K   F  AY   ++ML  G KPD  TY+  I   C+  ++  A
Sbjct: 597 DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +  +  + G +PD+  Y+ LI G    G+   A  +   M    C P+  T+ +L+  
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716

Query: 548 LF----------KTGDC--------DKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           L           + G C        D  +E+   ++E  + P+  SY   + G+C    +
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776

Query: 590 SDAFEFLNDALCR-GILPTTITWHILV 615
             A +  +    + GI P+ + ++ L+
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALL 803



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 269/578 (46%), Gaps = 49/578 (8%)

Query: 9   LNLLKA------EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI-- 60
           LNL+K       + N HT   L DS   +     +  L   +L + + P ++ + + I  
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402

Query: 61  -------------LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE------ 101
                        +EL+E +           +I+ Y K ++  KA+ V  +M E      
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPD 461

Query: 102 --IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
              +       CR   F+ A R L+ + ++GL PD ++Y ++I+ L KS  +  A  +FD
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            + ++ V  NVV Y  LIDG+ K G    A  + E+++ +  + PN +T+N +I+GLC  
Sbjct: 522 SLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL-PNSLTFNALIHGLCTD 580

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+  E   + ++M K + +    T    IH L K G+ + A R +++M+ SG   DA TY
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
              I  +CR G++++  ++   M   G   ++ +Y+ LI+G  + G+ + A  + + + +
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG--------RLADAASLVNRMD 390
             C     T   LI  L +  Y         +V+ G  G               L+ +M 
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKY--------GKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERF 449
           +HG   NA +   LM G  +   L  A  +F  M +K G SP+ + +N L++  CK+E+ 
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKH 812

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   V +M+  G  P + +  +LI  L +  + +    +    LQ G+  D   + I+
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKII 872

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           I G+   G VE   +L++ M+K  C  +  TY+ L++G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 241/478 (50%), Gaps = 21/478 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + E+ +  + + W +G  P    Y  +I+G  + GD+   L +  EM  +G+   
Sbjct: 91  LCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPT 150

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  +I    +KGD  + + +   +     + PNV  YN +IN LCKC    +  +M 
Sbjct: 151 VVTYGAIIHWLGRKGDLTKVESLLGEM-RARGLSPNVQIYNTVINALCKCRSASQASDML 209

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M K+    D  T+ + I G C+ G+V  A ++ RE +  G+  + ++Y  +I GFC  
Sbjct: 210 NQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVR 269

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+     +L  E+MGR    ++++   LI GL+ +G+V++A+ + E + E+    D+  +
Sbjct: 270 GEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIY 329

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLI+GLCK   L+ A  +L E+ E                     + + +   +L++GF
Sbjct: 330 NVLISGLCKKRMLSAAKNLLEEMLE------------------QKVQPDKFIYTTLIDGF 371

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           +++ KL +A  +F+ M  K C P +V+YN +I G CK     EA + +  M + G  PD 
Sbjct: 372 VRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ L++G  +   I  +L+L C  +++   P++  Y  LI G C+ G    A  L++ 
Sbjct: 431 FTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAK 490

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           M+     PN+V Y  L+  LFK     +A   + H+L     P+  + +  + GL +C
Sbjct: 491 MQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNC 548



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 38/487 (7%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           +I+      LC+ R   +A   LN + +    PDV ++ T+I G  + GD+  AL +  E
Sbjct: 187 QIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLRE 246

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
              RG+E N + Y  LI GF  +G+ M A ++   + M     P+++T   +I+GL   G
Sbjct: 247 AIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEM-MGRGHTPDMITLGALIHGLVVSG 305

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           + ++ L + ++M + +   D+  Y   I GLCK   +  A+ +  EM+E  +  D   Y 
Sbjct: 306 QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYT 365

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            +IDGF R+ K+ +  +++E M  K C ++V+YN++I+G  + G + EA++    +R+  
Sbjct: 366 TLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAG 425

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C  D  T+  L++G  K G ++ ++++L +                  M K  CK N +T
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCD------------------MMKRRCKPNIFT 467

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             SL+ G+       +A  LF +M  +G  P VV Y  LI  L K ++  +A ++ + ML
Sbjct: 468 YASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHML 527

Query: 461 EKGWKPDMITYSLLINGLC---------------QSKKIDMALKLCCQFLQKGFTPDVTM 505
                P+  T   L+NGL                Q+ +    L +    +  G  P ++ 
Sbjct: 528 LNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISA 587

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           YN +I  LC    +  A+ L   M  + C+P+ +T+ +L+ G    G+  K    W   L
Sbjct: 588 YNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGK----WRSAL 643

Query: 566 EERLRPD 572
               + D
Sbjct: 644 PNEFQQD 650



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 228/507 (44%), Gaps = 23/507 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           +E+A+     +  +    D YS   ++ GL   G +     + +  +  G     V YN+
Sbjct: 62  WERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNV 121

Query: 176 LIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           LIDG+ ++GD  R   +     MET  + P VVTY  +I+ L + G   +   +   M+ 
Sbjct: 122 LIDGYCRRGDIGRGLLLLGE--METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRA 179

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +   Y + I+ LCK  +   A  +  +MV+S    D VT+N MI GFCR G ++E
Sbjct: 180 RGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVRE 239

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L     R+G   N +SY  LI G    G+   A  +   +  +    D  T G LI+
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GL  +G +N A+ +  ++ E     + DA              N Y  N L++G  +   
Sbjct: 300 GLVVSGQVNDALIVREKMAE--RQVMPDA--------------NIY--NVLISGLCKKRM 341

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L  A  L +EM  +   P    Y TLI+G  + ++  +A    + M EK   PD++ Y++
Sbjct: 342 LSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNV 400

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +I G C+   +  A+       + G  PD   Y  L+ G    G +  +L+L  +M KR 
Sbjct: 401 MIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRR 460

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN+ TY +L+ G    GD   A +++  +  E L P+++ Y + +  L    ++  A 
Sbjct: 461 CKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAA 520

Query: 594 EFLNDALCRGILPTTITWHILVRAVMN 620
            +    L     P   T H LV  ++N
Sbjct: 521 AYFEHMLLNHCPPNDATVHYLVNGLVN 547



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 183/396 (46%), Gaps = 20/396 (5%)

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++  M   E   D ++ C  + GLC  G VE    +       G    AV YN +IDG+C
Sbjct: 68  LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G I     L   M  KG +  VV+Y  +I  L   G + +  S+   +R +  + +  
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  +IN LCK      A Q               A+ ++N+M K     +  T N+++ 
Sbjct: 188 IYNTVINALCK---CRSASQ---------------ASDMLNQMVKSRFNPDVVTFNTMIA 229

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +   +  A+ L +E  R+G  P  +SY  LI+G C       A   + EM+ +G  P
Sbjct: 230 GFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP 289

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           DMIT   LI+GL  S +++ AL +  +  ++   PD  +YN+LI GLC    +  A  L 
Sbjct: 290 DMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLL 349

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M ++   P+   Y TL+DG  ++     A +I+   +EE+  PDI++YN+ +KG C  
Sbjct: 350 EEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKF 408

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             M +A   ++     G +P   T+  LV      G
Sbjct: 409 GMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 213/483 (44%), Gaps = 33/483 (6%)

Query: 4   SAKRLLN-LLKAEKNP-----HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV 57
            A  +LN ++K+  NP     +T +A F    RE     +  L    +RR ++P  + + 
Sbjct: 204 QASDMLNQMVKSRFNPDVVTFNTMIAGF---CREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 58  SRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFE 117
             I       +     D+   +++  G+   PD             G     L    Q  
Sbjct: 261 PLIHGFCVRGEAMVASDL---LVEMMGRGHTPDMI---------TLGALIHGLVVSGQVN 308

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            A      + E+ + PD   Y  +I+GL K   L  A  + +EM E+ V+ +   Y  LI
Sbjct: 309 DALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLI 368

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           DGF +      A++I+E   ME    P++V YNVMI G CK G   E +     M+K   
Sbjct: 369 DGFVRSDKLSDARKIFE--FMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGC 426

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             D FTY + + G  K G++  + R+  +M++     +  TY ++I G+C  G      +
Sbjct: 427 IPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAED 486

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL- 355
           L+  M  +G   NVV Y +LI  L +  KV +A + +E +   +C  +  T   L+NGL 
Sbjct: 487 LFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLV 546

Query: 356 -CKNGYLNKAIQILNEVEEGGEGRLADA-ASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            C++G +N       +  E  +  L D    L++  D    +++AY  N+++    + + 
Sbjct: 547 NCRHGMVNSNRSDTKQAHE--KSALLDVFRGLIS--DGLDPRISAY--NAIIFSLCRHNM 600

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L  A+ L  +MS KGC P  +++ +L+ G       G+  S +    ++     +  Y  
Sbjct: 601 LGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMA 660

Query: 474 LIN 476
           L N
Sbjct: 661 LFN 663



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%)

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           HG   +A  CN L+   ++  + E A  L+ EM  +       S   ++ GLC   R  E
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               ++    +G  P  + Y++LI+G C+   I   L L  +   KG  P V  Y  +IH
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            L   G +     L   M+ R   PN+  YNT+++ L K     +A ++ N +++ R  P
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           D++++N  + G C    + +A + L +A+ RG+ P  +++  L+  
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 264/542 (48%), Gaps = 39/542 (7%)

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           L+   A   N++P ++     R+         +L R+   E+A R + S+   GL+P   
Sbjct: 41  LAYAGAVAPNAVPHRSAASNDRLR--------VLVRRGDLEEAIRLVESM--AGLEPSAA 90

Query: 137 SY-GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
                +I  L  SG    A  V         E +V+ YN ++ G+   G    A+    R
Sbjct: 91  GPCAALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNAR----R 141

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV    + P+  TYN +I GLC  GR D  L + D M +     D  TY   +   CK  
Sbjct: 142 LVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRS 201

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
             + A ++  EM + G   D VTYN +++G C+ G++ +  E  + +   GC  N VSYN
Sbjct: 202 GYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYN 261

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           I+++GL    + ++A  +   +  K    +  T  +LI+ LC+ G +  A++IL+++   
Sbjct: 262 IVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP-- 319

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                           K+GC  N+ + N +++ F +  K++ A+   + M   GC P +V
Sbjct: 320 ----------------KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIV 363

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SYNTL+  LC+      A   + ++ +KG  P +I+Y+ +I+GL ++ K + AL+L  + 
Sbjct: 364 SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEM 423

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + KG  PD+  Y+ +  GLC  G++E+A++ +  ++     PN V YN ++ GL K    
Sbjct: 424 VTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT 483

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             A++++ +++     P+  +Y I ++GL     + +A E + +   RG++  T+     
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGA 543

Query: 615 VR 616
           +R
Sbjct: 544 IR 545



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 231/445 (51%), Gaps = 26/445 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   Q + A+R + ++    ++PD Y+Y T+I GL   G    ALAV D+M  RG   +V
Sbjct: 131 CVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDV 187

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y IL++   K+  Y +A ++ + +  +    P++VTYNV++NG+C+ GR D+ +E   
Sbjct: 188 VTYTILLEATCKRSGYKQAVKLLDEM-RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLK 246

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +     E ++ +Y   + GLC A   E AE++  EM   G   + VT+N +I   CR G
Sbjct: 247 SLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRG 306

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   E+ + + + GC  N +SYN ++    +  K+D A++  EL+    C  D  ++ 
Sbjct: 307 LVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYN 366

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L+  LC+ G ++ A+++L+++++                   GC     + N++++G  
Sbjct: 367 TLLTALCRGGEVDAAVELLHQLKD------------------KGCTPVLISYNTVIDGLT 408

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A K E A+ L  EM  KG  P +++Y+T+ +GLC+  R  EA     ++ + G +P+ +
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTV 468

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ ++ GLC+ +    A+ L    +  G  P+ + Y ILI GL   G V++A ++ + +
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528

Query: 530 KKRNCVPNLVTYN---TLMDGLFKT 551
             R  V   +       L+DG   T
Sbjct: 529 CSRGVVSKTLVNKGAIRLLDGTMHT 553


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 251/532 (47%), Gaps = 19/532 (3%)

Query: 109  ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            +L   +   +A     +L  +G+ P   S   +++ LVK+      + VF  + E     
Sbjct: 491  LLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 550

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +   Y   I    K  D  +  E++ R+  +  + P V  YNV+I+GLCK  +  +  ++
Sbjct: 551  SKFMYGKAIQAAVKLSDVGKGLELFNRMKHD-RISPTVFIYNVLIDGLCKVRQMKDAEQL 609

Query: 229  WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            +D M          TY + I G CK GN E + +V   M    I    +T+N ++ G  +
Sbjct: 610  FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669

Query: 289  AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            AG +++   +   M  +G + +  +++IL  G   N K D A+ ++E   +     ++ T
Sbjct: 670  AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729

Query: 348  HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
              +L+N LCK G + KA +IL      G                 +G L  A   ++ M+
Sbjct: 730  CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789

Query: 391  KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            K G K +    N L+  F +   +ENA     +M  KG SP+V +YN LI G  +   F 
Sbjct: 790  KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849

Query: 451  EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            + +  +KEM + G  P++++Y  LIN LC+  K+  A  +      +G +P+V +YN+LI
Sbjct: 850  KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909

Query: 511  HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             G CS GK+EDA +    M K+    NLVTYNTL+DGL   G   +A ++   I  + L+
Sbjct: 910  DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLK 969

Query: 571  PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            PD+ +YN  + G      +        +    GI PT  T+H+L+      G
Sbjct: 970  PDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG 1021



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 255/562 (45%), Gaps = 50/562 (8%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            L + +QF        ++ E   +P  + YG  I   VK  D+   L +F+ M    +   
Sbjct: 527  LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPT 586

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V  YN+LIDG  K      A+++++ + +   + P+++TYN +I+G CK G  ++  ++ 
Sbjct: 587  VFIYNVLIDGLCKVRQMKDAEQLFDEM-LARRLLPSLITYNTLIDGYCKDGNPEKSFKVR 645

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +RMK +  E    T+ + + GL KAG VE AE V  EM + G   DA T++ + DG+   
Sbjct: 646  ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705

Query: 290  GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             K      ++E     G  +N  + +IL+  L + G++++A  I      K    +   +
Sbjct: 706  DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLY 765

Query: 349  GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
              +I+G  + G L  A   ++ +E+ G                  G + +A   VN+M  
Sbjct: 766  NTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL 825

Query: 392  HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             G   +  T N L+ G+ +  + +    L KEM   G  P VVSY TLIN LCK  +  E
Sbjct: 826  KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            A    ++M ++G  P++  Y++LI+G C   KI+ A +   +  +KG   ++  YN LI 
Sbjct: 886  AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN--------- 562
            GL   GK+ +A  +   + ++   P++ TYN+L+ G    G+  + + ++          
Sbjct: 946  GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005

Query: 563  -----HIL-----------------EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
                 H+L                 E  L+PD++ YN  L        M  AF      +
Sbjct: 1006 TLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMI 1065

Query: 601  CRGILPTTITWHILVRAVMNNG 622
             + I     T++ L+   +  G
Sbjct: 1066 EKSIGLDKTTYNSLILGQLKVG 1087



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 271/610 (44%), Gaps = 55/610 (9%)

Query: 8    LLNLLKAEKNPHTAL---ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
            L N +K ++   T      L D   +      +  LF  +L R + P L+ + +      
Sbjct: 574  LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNT------ 627

Query: 65   EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQF 116
                          +I  Y K+  P+K+  V +RM           F      L +    
Sbjct: 628  --------------LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMV 673

Query: 117  EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            E A+  L  + ++G  PD +++  + +G   +     AL V++   + G++ N    +IL
Sbjct: 674  EDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733

Query: 177  IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
            ++   K+G   +A+EI  R  M   + PN V YN MI+G  + G         D M+K  
Sbjct: 734  LNALCKEGQIEKAEEILGR-EMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792

Query: 237  REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
             + D   Y   I   C+ G++E AE+   +M   G+     TYN +I G+ R  +  +CF
Sbjct: 793  MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852

Query: 297  ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            +L + M   G + NVVSY  LI  L +  K+ EA  +   + ++  + +   + +LI+G 
Sbjct: 853  DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912

Query: 356  CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            C                   +G++ DA      M K G +LN  T N+L++G     KL 
Sbjct: 913  C------------------SKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLA 954

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             A  +  E+SRKG  P V +YN+LI+G           +  +EM   G KP + TY LLI
Sbjct: 955  EAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI 1014

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            + LC  + I++  K+   F +    PD+ +YN ++H     G ++ A  L   M +++  
Sbjct: 1015 S-LCTKEGIELTKKI---FGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIG 1070

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
             +  TYN+L+ G  K G   +   + + +    + P+  +Y+I +KG C       A+ +
Sbjct: 1071 LDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVW 1130

Query: 596  LNDALCRGIL 605
              +   +G+L
Sbjct: 1131 YREMQEKGLL 1140



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 251/516 (48%), Gaps = 27/516 (5%)

Query: 41   FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDKALDVFQ-- 97
            F+ +L+ L    +V     +L  ++ Q  + P+    S++   Y  N   D AL V++  
Sbjct: 660  FNTLLKGLFKAGMVEDAENVLTEMKDQG-FVPDAFTFSILFDGYSSNDKADAALGVYETA 718

Query: 98   -----RMNEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                 +MN  + C      LC++ Q EKA+  L     KGL P+   Y T+I+G  + GD
Sbjct: 719  VDSGLKMN-AYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777

Query: 151  LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
            L+GA    D M ++G++ + + YN LI  F + GD   A++   ++ ++  V P+V TYN
Sbjct: 778  LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLK-GVSPSVETYN 836

Query: 211  VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            ++I G  +   FD+C ++   M+ N    +  +Y + I+ LCK   +  A+ V R+M + 
Sbjct: 837  ILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 896

Query: 271  GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
            G+  +   YN +IDG C  GKI++ F   E M +KG  LN+V+YN LI GL  NGK+ EA
Sbjct: 897  GVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEA 956

Query: 330  ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNR 388
              +   +  K    D  T+  LI+G    G + + I +  E++  G +  L     L++ 
Sbjct: 957  EDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL 1016

Query: 389  MDKHGCKL------------NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
              K G +L            +    N +++ +     ++ A  L K+M  K       +Y
Sbjct: 1017 CTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTY 1076

Query: 437  NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            N+LI G  KV +  E  S + EM  +  +P+  TY +++ G C+ K    A     +  +
Sbjct: 1077 NSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQE 1136

Query: 497  KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            KG   DV + + L+ GL    + ++A  + S M  R
Sbjct: 1137 KGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 3/196 (1%)

Query: 430 SPTV---VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           SP++    SY  L   L + +   EA      +  +G  P   + +LL++ L ++K+  +
Sbjct: 476 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRV 535

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            + +    L+  F P   MY   I        V   L+L++ MK     P +  YN L+D
Sbjct: 536 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLID 595

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K      A ++++ +L  RL P +I+YN  + G C       +F+         I P
Sbjct: 596 GLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEP 655

Query: 607 TTITWHILVRAVMNNG 622
           + IT++ L++ +   G
Sbjct: 656 SLITFNTLLKGLFKAG 671


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 295/602 (49%), Gaps = 42/602 (6%)

Query: 18  PHTALALFDSATREPGYAHSPHLFH--HIL----RRLIDPKL-VVHVSRILELIEIQKCY 70
           P  A+ LF    R     HSP   H  +IL    RR+  P L +  V R+L     +   
Sbjct: 133 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL-----KNGL 187

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
            P+D + S+I  + K+   DKA  +F  M E      I  C + I  LC+ ++ +KA+  
Sbjct: 188 GPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 247

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  + + G+ PD+++Y  +I+GL KS  +  A  V ++M E G   N + YN LI G+  
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G +  +  +++++     V P V   N  I+ L K GR +E   ++D M     + D  
Sbjct: 308 SGMWNESVRVFKQMS-SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 366

Query: 243 TYCSFIHGLCKAGN--VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           +Y + +HG   A +  +     ++  M+  GI  +   +N +I+ + R G + +   ++E
Sbjct: 367 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 426

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  KG + + V++  +I  L   G++D+A+  +  + +         +G LI G C +G
Sbjct: 427 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 486

Query: 360 YLNKAIQILNE-----VEEGG-------------EGRLADAASLVNRMDKHGCKLNAYTC 401
            L KA ++++E     +   G             EGR+A+   +++ M + G + N  T 
Sbjct: 487 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 546

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NSLM G+     +E A  L   M+  G  P    Y TL++G CK  R  +A +  ++ML 
Sbjct: 547 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 606

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG KP  + YS++++GL Q+++   A K+  + ++ G T  +  Y +++ GLC     ++
Sbjct: 607 KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDE 666

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A  L   +   N   +++T+N ++  +FK G   +A E+++ I    L P+I +Y++ + 
Sbjct: 667 ANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMIT 726

Query: 582 GL 583
            L
Sbjct: 727 NL 728



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 240/498 (48%), Gaps = 24/498 (4%)

Query: 132 KPDVYSYGTVINGL--VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            P +++Y  +I+    V   DL   LA+   + + G+  +   Y+ LI GF K G+  +A
Sbjct: 153 PPTIHTYNILIDCYRRVHRPDL--GLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA 209

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++  + ME  V P ++  N +I  LCK    D+   +  +M  +    D FTY   I 
Sbjct: 210 HCLFLEM-MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           GLCK+  ++ AERV  +MVE+G   +++TYN++I G+  +G   E   +++ M   G + 
Sbjct: 269 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 328

Query: 310 VVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            V   N  I  L ++G+ +EA  I++ +  K    D  ++  +++G              
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT----------- 377

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  +  LAD  ++ N M   G   N +  N L+N + +   ++ A+ +F++M  KG
Sbjct: 378 -----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V++ T+I+ LC++ R  +A      M++ G  P    Y  LI G C   ++  A 
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 489 KLCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           +L  + + K   P  V  ++ +I+ LC  G+V +   +   M +    PN+VT+N+LM+G
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
               G+ ++A  + + +    + P+   Y   + G C   R+ DA     D L +G+ PT
Sbjct: 553 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 612

Query: 608 TITWHILVRAVMNNGAST 625
           ++ + I++  +     +T
Sbjct: 613 SVLYSIILHGLFQARRTT 630



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 266/567 (46%), Gaps = 35/567 (6%)

Query: 89  PDKALDVFQRMNE----------IFGCEAGILCRKR--QFEKAKRFLNSLWEKGLKPDVY 136
           P  A+++F+RM+           I      I C +R  + +     +  L + GL PD +
Sbjct: 133 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 192

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY ++I G VK G++  A  +F EM E+GV   ++  N +I    K  +  +A+ I +++
Sbjct: 193 SY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 251

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V ++ + P++ TY+++I+GLCK    D+   + ++M +     +S TY S IHG   +G 
Sbjct: 252 V-DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 310

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
              + RV+++M   G+       N+ I    + G+  E   +++ M  KG   +++SY+ 
Sbjct: 311 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 370

Query: 316 LIRG--LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           ++ G     +  + +  +I+ L+  K    +     +LIN   + G ++KA+ I  +++ 
Sbjct: 371 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 430

Query: 374 GGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GRL DA    N M   G   +      L+ G     +L  
Sbjct: 431 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 490

Query: 417 AIFLFKEMSRKGCSPTVVSY-NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           A  L  EM  K   P  V Y +++IN LCK  R  E    +  M++ G +P+++T++ L+
Sbjct: 491 AKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 550

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G C    ++ A  L       G  P+  +Y  L+ G C  G+++DAL ++ +M  +   
Sbjct: 551 EGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK 610

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P  V Y+ ++ GLF+      A ++++ ++E      I +Y + L GLC  +   +A   
Sbjct: 611 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 670

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L       +    IT++I++ A+   G
Sbjct: 671 LEKLFAMNVKFDIITFNIVISAMFKVG 697



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 258/548 (47%), Gaps = 35/548 (6%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           +P LF +  I+  L   K +    R+LE + ++    P  +   S+I  Y  + M ++++
Sbjct: 257 APDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 94  DVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            VF++M+       +  C + I  L +  +  +AK   +S+  KG KPD+ SY T+++G 
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 146 VKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             + D  L     +F+ M  +G+  N   +NILI+ + + G   +A  I+E +     + 
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMI 434

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ VT+  +I+ LC+ GR D+ L  ++ M           Y   I G C  G +  A+ +
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494

Query: 264 YREMVESGIFVDAVTY-NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
             EM+   I    V Y +++I+  C+ G++ E  ++ ++M + G   NVV++N L+ G  
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 554

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G ++EA ++ + +       +   +G L++G CKNG                  R+ D
Sbjct: 555 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG------------------RIDD 596

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A ++   M   G K  +   + +++G  QA +   A  +F EM   G + ++ +Y  ++ 
Sbjct: 597 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 656

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+     EA   ++++     K D+IT++++I+ + +  +   A +L       G  P
Sbjct: 657 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 716

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  Y+++I  L      E+A  L+ +++K     +    N ++  L    +  KA    
Sbjct: 717 NIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 776

Query: 562 NHILEERL 569
           + I E  L
Sbjct: 777 SIIGENNL 784



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 186/445 (41%), Gaps = 57/445 (12%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDK 91
           G A + H+F+ ++       ++     I E ++  K   P+ V   +VI +  +    D 
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ-NKGMIPDTVTFATVISSLCRIGRLDD 455

Query: 92  ALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD-VYSYGTVI 142
           AL  F  M +I        +GC     C   +  KAK  ++ +  K + P  V  + ++I
Sbjct: 456 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           N L K G +     + D M + G   NVV +N L++G+   G+   A  + + +     +
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGI 574

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN   Y  +++G CK GR D+ L ++  M     +  S  Y   +HGL +A     A++
Sbjct: 575 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 634

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCR---------------------------------- 288
           ++ EM+ESG  V   TY  ++ G CR                                  
Sbjct: 635 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 694

Query: 289 -AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G+ +E  EL++ +   G + N+ +Y+++I  L++    +EA +++  + +    +DS 
Sbjct: 695 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 754

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
               ++  L     + KA   L+ +   GE  L   AS ++ +       + ++   ++ 
Sbjct: 755 LLNHIVRMLLNKAEVAKASNYLSII---GENNLTLEASTISLL------ASLFSREGMIK 805

Query: 407 GFIQASKLENAIFLFKEMSRKGCSP 431
           G    +       L  E+S+   +P
Sbjct: 806 GLFGTAPAPAPALLELELSQTVSAP 830


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 260/544 (47%), Gaps = 27/544 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F       C+  + E+A    + + E G+ P+V +Y TVI+GL  SG    A    ++M
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 162 FERGVETNVVCYNILIDGFFKK---GD-YMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            ERGVE  ++ Y+IL+ G  K    GD Y   KE+ E+        PNV+ YN +I+ L 
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEK-----GFPPNVIVYNNLIDSLI 368

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           + G  ++ +E+ D M        S TY + I G CK+G  + AER+ +EM+  G  V+  
Sbjct: 369 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQG 428

Query: 278 TYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           ++ ++I   C           + E++ R           LI GL ++GK  +A+ +W   
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV-EEG----------------GEGRL 379
             K    D+ T   L++GLC+ G L +  +I  E+   G                G  +L
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKL 548

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            +A   ++ M K G K + YT + L+ G +  +K+E AI  + +  R G  P V +Y+ +
Sbjct: 549 DEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVM 608

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+G CK ER  E      EM+    +P+ + Y+ LI   C+S ++ MAL+L      KG 
Sbjct: 609 IDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGI 668

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           +P+   Y  LI G+    +VE+A  L   M+     PN+  Y  L+DG  K G   K   
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 728

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +   +  + + P+ I+Y + + G      +++A   L++   +GI+P +IT+   +   +
Sbjct: 729 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYL 788

Query: 620 NNGA 623
             G 
Sbjct: 789 KQGG 792



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 249/508 (49%), Gaps = 20/508 (3%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  KG+ P   +   ++  LV++ +       F  +  +GV  +V  +   I+ F K G 
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGK 267

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A E++ ++  E  V PNVVTYN +I+GL   GR+DE     ++M +   E    TY 
Sbjct: 268 VEEAIELFSKM-EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYS 326

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GL KA  +  A  V +EM E G   + + YN +ID    AG + +  E+ ++M  K
Sbjct: 327 ILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSK 386

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G  L   +YN LI+G  ++G+ D A  + + +     N +  +   +I  LC +   + A
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSA 446

Query: 365 IQILNEV-----EEGG------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           ++ + E+       GG             G+ + A  L  +    G  ++  T N+L++G
Sbjct: 447 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHG 506

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A KLE    + KE+  +G     VSYNTLI+G C  ++  EA+ F+ EM++KG KPD
Sbjct: 507 LCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPD 566

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TYS+LI GL    K++ A++      + G  PDV  Y+++I G C A + E+  +L+ 
Sbjct: 567 NYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFD 626

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M   N  PN V YN L+    ++G    ALE+   +  + + P+  +Y   +KG+   S
Sbjct: 627 EMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 686

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A   L +    G+ P    +  L+
Sbjct: 687 RVEEAKLLLEEMRMEGLEPNVFHYTALI 714



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 95/165 (57%), Gaps = 7/165 (4%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ---KGFTPDVTMYNILIHGLCSAGK 518
           KG  P   T ++L+  L ++ +     + CC+      KG +PDV ++   I+  C  GK
Sbjct: 212 KGMFPSKTTCNILLTSLVRATE----FQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGK 267

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE+A++L+S M++   VPN+VTYNT++DGL  +G  D+A      ++E  + P +I+Y+I
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +KGL    R+ DA+  L +   +G  P  I ++ L+ +++  G+
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 7/211 (3%)

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG---EAYSFVKEMLEKGWKPDMITYSL 473
           A+ +F  ++ KG  P+  + N L+  L +   F    EA+  V     KG  PD+  ++ 
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC----KGVSPDVYLFTT 257

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            IN  C+  K++ A++L  +  + G  P+V  YN +I GL  +G+ ++A      M +R 
Sbjct: 258 AINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERG 317

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P L+TY+ L+ GL K      A  +   + E+   P++I YN  +  L     ++ A 
Sbjct: 318 VEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAI 377

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           E  +  + +G+  T+ T++ L++    +G +
Sbjct: 378 EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQA 408


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 242/487 (49%), Gaps = 39/487 (8%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE--RLVMETSVYPNVVTYNV 211
            L  F EM   G   NVV YN +IDG+ K     R  E +   R +    + PN++T+N+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCK---LKRTDEAFGFLRSMGLKGLEPNLITFNM 58

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +INGLC+ GR  E  E+   M +     D  TY + ++G CK GN   A  ++ EMV +G
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           +  + VTY ++I+  C+AG +    E ++ M  +G C N  +Y  +I G  + G +DEA 
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +   +          T+  LING C  G + +AI +L ++   G+G L D  S      
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV--GKGVLPDVVSY----- 231

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                      +++++GF +  +L+ A  +  EM  K   P  V+Y++LI GLC+  R  
Sbjct: 232 -----------STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLT 280

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA    +EML     PD  TY+ LIN  C+   ++ AL L  + +QKGF PD   YN+LI
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD---------------GLFKTGDCD 555
           +GL    + ++A +L   +   + +P+ VTYNTL++               G    G  D
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMD 400

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A +++  ++ +  +P+   YN+ + G C    +  A++   + +    +P T+T   LV
Sbjct: 401 EADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460

Query: 616 RAVMNNG 622
           +A+   G
Sbjct: 461 KALFTEG 467



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 240/498 (48%), Gaps = 39/498 (7%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           RF   +   G  P+V +Y T+I+G  K      A      M  +G+E N++ +N++I+G 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 181 FKKGDYMRAKEIWERLV-METSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
            + G   R KE  E LV M    Y P+ VTYN ++NG CK G F + L +   M +N   
Sbjct: 64  CRDG---RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +  TY S I+ +CKAGN+  A   + +M   G+  +  TY  +I+GF + G + E + +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M R G + ++V+YN LI G    G+++EAI + + +  K    D  ++  +I+G  +
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           N  L++A Q+  +VE  G+  L DA                 T +SL+ G  +  +L  A
Sbjct: 241 NQELDRAFQM--KVEMIGKSVLPDAV----------------TYSSLIQGLCEQRRLTEA 282

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +F+EM      P   +Y TLIN  CK     +A     EM++KG+ PD +TY++LING
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH---------------GLCSAGKVEDA 522
           L +  +   A +L  +       P    YN LI                G C  G +++A
Sbjct: 343 LNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEA 402

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            Q++ +M  +N  PN   YN ++ G  + G+  KA +++  ++     P  ++    +K 
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462

Query: 583 LCSCSRMSDAFEFLNDAL 600
           L +     +  E + D L
Sbjct: 463 LFTEGMDGELNEVIGDIL 480



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 256/558 (45%), Gaps = 52/558 (9%)

Query: 65  EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRK 113
           E+++  C  +V    ++I  Y K    D+A    + M  + G E  +         LCR 
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMG-LKGLEPNLITFNMIINGLCRD 66

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + ++    L  +  KG  PD  +Y T++NG  K G+   AL +  EM   G+  NVV Y
Sbjct: 67  GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LI+   K G+  RA E ++++ +   + PN  TY  +ING  + G  DE   + + M 
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           ++       TY + I+G C  G +E A  + ++MV  G+  D V+Y+ +I GF R  ++ 
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 294 ECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             F++  E++G+    + V+Y+ LI+GL E  ++ EA  +++ +       D  T+  LI
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           N  CK G LNKA+ + +E+ +  +G L DA                 T N L+NG  + +
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQ--KGFLPDAV----------------TYNVLINGLNKQA 347

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           + + A  L  ++      P+ V+YNTLI   C +E F  A + VK               
Sbjct: 348 RSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIE-FKSAVALVK--------------- 391

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
               G C    +D A ++    + K   P+  +YN++IHG C  G V  A +LY  M   
Sbjct: 392 ----GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           + VP+ VT   L+  LF  G   +  E+   IL      D     + ++       M   
Sbjct: 448 DFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMV 507

Query: 593 FEFLNDALCRGILPTTIT 610
           F  L +    G++P+T T
Sbjct: 508 FNLLTEMAKDGLIPSTGT 525



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%)

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           M L+   +  + G  P+V  YN +I G C   + ++A     +M  +   PNL+T+N ++
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +GL + G   +  E+   +  +   PD ++YN  + G C       A     + +  G+ 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T+  L+ ++   G
Sbjct: 121 PNVVTYTSLINSMCKAG 137


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 227/458 (49%), Gaps = 23/458 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           E+F+   + NV  YNIL+      G    A+++++    E +  P+VVTY ++I+G C  
Sbjct: 252 ELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFD----EMASPPDVVTYGILIHGYCAL 307

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G  +  +++ D M     E ++  Y S +  LC  G V  A  V  +MV   + +D   Y
Sbjct: 308 GELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVY 367

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ GFC  G +      ++ M RKG   + V+Y  LI GL   G++ EA  + + +  
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +  + D  T+ VL++G CK G + +A Q+ N              ++V R    G   N 
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN--------------TMVQR----GVAPNV 469

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T  +L +G  +   ++ A  L  EMS KG      +YN+LINGLCK     +A   + +
Sbjct: 470 VTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMAD 529

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G KPD+ TY+ LI+ LC+S ++D A  L  + L  G  P +  YN+L++G C +G+
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VE   +L   M ++N  PN  TYN+LM       +     EI+  +    + P+  +YNI
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNI 649

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            +KG C    M +A  F N+ + +G   T  ++  L+R
Sbjct: 650 LIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIR 687



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 252/528 (47%), Gaps = 42/528 (7%)

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           P    L  ++ YG +  P+    V  R+                 ++A      L +K  
Sbjct: 218 PSAPLLRRVRQYGISPSPEACNAVLSRL---------------PLDEAIELFQGLPDK-- 260

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             +V SY  ++  L  +G +  A  +FDEM       +VV Y ILI G+   G+   A +
Sbjct: 261 --NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVK 315

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + + +V    V PN   Y  ++  LC  GR  + L + + M  ++   D   Y + + G 
Sbjct: 316 LLDDMVAR-GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNV 310
           C  G++  A R + EM   G+  D VTY  +I+G CRAG++KE  + L E++ R+  ++ 
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+Y +L+ G  + GK+ EA  +   + ++    +  T+  L +GLCK G +  A ++L+E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                             M   G +LNA T NSL+NG  +A  L+ A+    +M   G  
Sbjct: 495 ------------------MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V +Y TLI+ LCK      A+  ++EML+ G KP ++TY++L+NG C S +++   KL
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               L+K   P+ T YN L+   C    ++   ++Y  M  RN  PN  TYN L+ G  K
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
                +A    N ++E+  R    SY+  ++ L    +  +A +  +D
Sbjct: 657 ARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHD 704



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 187/368 (50%), Gaps = 27/368 (7%)

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENG 324
           R + + GI       NA++        + E  EL++ +  K   NV SYNIL++ L   G
Sbjct: 224 RRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK---NVCSYNILLKVLCGAG 276

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------- 375
           +V++A    +L  E     D  T+G+LI+G C  G L  A+++L+++   G         
Sbjct: 277 RVEDA---RQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYT 333

Query: 376 --------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                   +GR++DA ++V  M  H   L+     ++++GF     L +A   F EM RK
Sbjct: 334 SVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK 393

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G +   V+Y TLINGLC+     EA   ++EML +    D +TY++L++G C+  K+  A
Sbjct: 394 GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEA 453

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            ++    +Q+G  P+V  Y  L  GLC  G V+ A +L   M  +    N  TYN+L++G
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 513

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L K G  D+A+     +    L+PD+ +Y   +  LC    +  A + L + L  GI PT
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573

Query: 608 TITWHILV 615
            +T+++L+
Sbjct: 574 IVTYNVLM 581


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 259/532 (48%), Gaps = 25/532 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R    E   R  + L + GL PD  +Y T+I    K GDL  A   F  + E G+E  
Sbjct: 43  LARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPE 102

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEM 228
               N L+ G+ + G+  +A   W  L+M       N  +Y ++I GLC      + L +
Sbjct: 103 TFTCNALVLGYCRTGELRKA--CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVL 160

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  MK++    +   +   I GLCK+G V  A  ++  M ++G+    +TYNAMI G+ +
Sbjct: 161 FLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSK 220

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++ +  ++ E+M + GC  +  +YN LI GL +  K +EA  +     ++       T
Sbjct: 221 LGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVT 279

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMD 390
              LING C     + A+++ N++                     + RL +A  L+N + 
Sbjct: 280 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 339

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            +G   N  T  S+++G+ ++ K++ A+ + K M R GC P   +YN+L+ GL K ++  
Sbjct: 340 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 399

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A + + +M + G  P++ITY+ L+ G C     D A +L     Q G  PD   Y +L 
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             LC AG+ E+A   YS + ++      V Y TL+DG  K G+ D A  +   +++E   
Sbjct: 460 DALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 516

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           PD  +Y++ L  LC   R+++A   L+    RGI  T   + IL+  ++  G
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 568



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 256/546 (46%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   +F+ A R  N +     K D+  +G +IN L+K   L  A  + +E+   G+  NV
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  +IDG+ K G    A E+  +++      PN  TYN ++ GL K  +  + + +  
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 406

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+K+    +  TY + + G C   + + A R++  M ++G+  D   Y  + D  C+AG
Sbjct: 407 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 466

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V Y  LI G  + G  D A ++ E + ++ C  DS T+ 
Sbjct: 467 RAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL++ LCK   LN+A+ IL+++   G                 EG+   A  + N M   
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    +N + +  +LE+A  L  +M R+G +P VV+YN LI+G   +     A
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSK----------------KIDMALKLCCQFLQ 496
           +S +K M+    +P+  TY LL+  L +                  ++D+  +L  + ++
Sbjct: 644 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 703

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P VT Y+ LI G C AG++E+A  L  +M  +   PN   Y  L+     T   +K
Sbjct: 704 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 763

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           AL   + + E   +P + SY + + GLC+            D L  G     + W IL  
Sbjct: 764 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 823

Query: 617 AVMNNG 622
            ++  G
Sbjct: 824 GLLKAG 829



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 266/563 (47%), Gaps = 62/563 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  +   KA      +   G  P+V ++  +I+GL KSG +  A  +FD M + GV  +
Sbjct: 148 LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 207

Query: 170 VVCYNILIDGFFKKG---DYMRAKEIWER-------LVMETSVY---------------- 203
           V+ YN +I G+ K G   D ++ KE+ E+           T +Y                
Sbjct: 208 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNN 267

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                  P VVT+  +ING C   +FD+ L M ++M  ++ + D   +   I+ L K   
Sbjct: 268 AVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR 327

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A+ +  E+  +G+  + +TY ++IDG+C++GK+    E+ ++M R GC  N  +YN 
Sbjct: 328 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ GL+++ K+ +A+++   +++     +  T+  L+ G C     + A ++   +E+ G
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 447

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR  +A S + R    G  L      +L++GF +A   + A 
Sbjct: 448 LKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAA 504

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + M  +GC+P   +Y+ L++ LCK +R  EA   + +M  +G K  +  Y++LI+ +
Sbjct: 505 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 564

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +  K D A ++  +    G  P  T Y + I+  C  G++EDA  L   M++    P++
Sbjct: 565 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 624

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTYN L+DG    G  D+A      ++     P+  +Y + LK L     +     ++  
Sbjct: 625 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL-----LKGNLAYVRS 679

Query: 599 ALCRG---ILPTTITWHILVRAV 618
               G   ++   ITW +L R V
Sbjct: 680 VDTSGMWNLIELDITWQLLERMV 702



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/658 (26%), Positives = 297/658 (45%), Gaps = 71/658 (10%)

Query: 27  SATREPGYAH---SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQA 82
            A R  G A    SP  ++  LR L    +  ++ R+   + +Q    P+ V   ++I++
Sbjct: 19  QAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQL-VQDGLLPDTVTYNTMIKS 77

Query: 83  YGKNSMPDKALDVFQRM------NEIFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPD 134
           Y K      A   F+ +       E F C A +L  CR  +  KA      +   G + +
Sbjct: 78  YCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN 137

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            YSY  +I GL  +  +  AL +F  M   G   NV  +  LI G  K G    A+ +++
Sbjct: 138 EYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD 197

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +  +  V P+V+TYN MI G  K GR ++ L++ + M+KN    D +TY + I+GLC  
Sbjct: 198 AMP-QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 256

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
              E AE +    V+ G     VT+  +I+G+C A K  +   +   M    C L++  +
Sbjct: 257 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNA---DSTTHGVLINGLCKNGYLNKAIQILNE 370
             LI  L++  ++ EA    ELL E + N    +  T+  +I+G CK+G ++ A+++L  
Sbjct: 316 GKLINSLIKKDRLKEA---KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           +E  G                 + +L  A +L+ +M K G   N  T  +L+ G      
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV----------------- 456
            +NA  LF+ M + G  P   +Y  L + LCK  R  EAYSF+                 
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 492

Query: 457 ---------------KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
                          + M+++G  PD  TYS+L++ LC+ K+++ AL +  Q   +G   
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            +  Y ILI  +   GK + A ++Y+ M      P+  TY   ++   K G  + A ++ 
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
             +  E + PD+++YNI + G      +  AF  L   +     P   T+ +L++ ++
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL 670



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 215/435 (49%), Gaps = 13/435 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +  F+ A R    + + GLKPD ++Y  + + L K+G    A   +  +  +GV    
Sbjct: 428 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTK 484

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K G+   A  + ER++ E    P+  TY+V+++ LCK  R +E L + D
Sbjct: 485 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCT-PDSYTYSVLLHALCKQKRLNEALPILD 543

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     +   F Y   I  + + G  + A+R+Y EM  SG    A TY   I+ +C+ G
Sbjct: 544 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 603

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++  +L   M R+G   +VV+YNILI G    G +D A S  + +   +C  +  T+ 
Sbjct: 604 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 663

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+  L K       +  +  V+  G   L +      L+ RM KHG      T +SL+ 
Sbjct: 664 LLLKHLLKGN-----LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 718

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A +LE A  L   M  KG SP    Y  LI   C  + F +A SFV  M E G++P
Sbjct: 719 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 778

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y LL+ GLC     +    L C  L+ G+  D   + IL  GL  AG V+   Q+ 
Sbjct: 779 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838

Query: 527 SNMKKRNCVPNLVTY 541
           S M+KR C  +  TY
Sbjct: 839 SIMEKRYCCISSQTY 853



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 242/531 (45%), Gaps = 38/531 (7%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ++FG     L +K + ++AK  LN +   GL P+V +Y ++I+G  KSG +  AL V   
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G + N   YN L+ G  K     +A  +  ++  +  + PNV+TY  ++ G C   
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEH 431

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FD    +++ M++N  + D   Y      LCKAG    AE  Y  +V  G+ +  V Y 
Sbjct: 432 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYT 488

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +IDGF +AG       L E M  +GC  +  +Y++L+  L +  +++EA+ I + +  +
Sbjct: 489 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 548

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
                   + +LI+ + + G  + A ++ NE+   G                 EGRL DA
Sbjct: 549 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 608

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+ +M++ G   +  T N L++G      ++ A    K M    C P   +Y  L+  
Sbjct: 609 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKH 668

Query: 443 LCK--------VERFGE--------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           L K        V+  G          +  ++ M++ G  P + TYS LI G C++ +++ 
Sbjct: 669 LLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 728

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  L      KG +P+  +Y +LI   C     E AL   S M +    P L +Y  L+ 
Sbjct: 729 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 788

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           GL   GD +K   ++  +LE     D +++ I   GL     +   F+ L+
Sbjct: 789 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 839



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 216/432 (50%), Gaps = 19/432 (4%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN  +  L +    +    ++ ++ ++    D+ TY + I   CK G++  A R +R ++
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           E G+  +  T NA++ G+CR G++++   L+ +M   GC  N  SY ILI+GL +   V 
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----------- 376
           +A+ ++ +++   C+ +      LI+GLCK+G +  A  + + + + G            
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR+ DA  +   M+K+GC  + +T N+L+ G     K E A  L     ++G +
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFT 274

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           PTVV++  LING C  E+F +A     +M+    K D+  +  LIN L +  ++  A +L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  P+V  Y  +I G C +GKV+ AL++   M++  C PN  TYN+LM GL K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                KA+ +   + ++ + P++I+Y   L+G C      +AF         G+ P    
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 611 WHILVRAVMNNG 622
           + +L  A+   G
Sbjct: 455 YAVLTDALCKAG 466



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 108/236 (45%)

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
           ADA   + R       L+    N  +    +    E    ++ ++ + G  P  V+YNT+
Sbjct: 15  ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 74

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I   CK      A+ + + +LE G +P+  T + L+ G C++ ++  A  L       G 
Sbjct: 75  IKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC 134

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
             +   Y ILI GLC A  V  AL L+  MK+  C PN+  +  L+ GL K+G    A  
Sbjct: 135 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 194

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++ + +  + P +++YN  + G     RM+DA +        G  P   T++ L+
Sbjct: 195 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 295/602 (49%), Gaps = 42/602 (6%)

Query: 18  PHTALALFDSATREPGYAHSPHLFH--HIL----RRLIDPKL-VVHVSRILELIEIQKCY 70
           P  A+ LF    R     HSP   H  +IL    RR+  P L +  V R+L     +   
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL-----KNGL 207

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
            P+D + S+I  + K+   DKA  +F  M E      I  C + I  LC+ ++ +KA+  
Sbjct: 208 GPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  + + G+ PD+++Y  +I+GL KS  +  A  V ++M E G   N + YN LI G+  
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G +  +  +++++     V P V   N  I+ L K GR +E   ++D M     + D  
Sbjct: 328 SGMWNESVRVFKQMS-SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 386

Query: 243 TYCSFIHGLCKAGN--VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           +Y + +HG   A +  +     ++  M+  GI  +   +N +I+ + R G + +   ++E
Sbjct: 387 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 446

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  KG + + V++  +I  L   G++D+A+  +  + +         +G LI G C +G
Sbjct: 447 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 506

Query: 360 YLNKAIQILNE-----VEEGG-------------EGRLADAASLVNRMDKHGCKLNAYTC 401
            L KA ++++E     +   G             EGR+A+   +++ M + G + N  T 
Sbjct: 507 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 566

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NSLM G+     +E A  L   M+  G  P    Y TL++G CK  R  +A +  ++ML 
Sbjct: 567 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 626

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG KP  + YS++++GL Q+++   A K+  + ++ G T  +  Y +++ GLC     ++
Sbjct: 627 KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDE 686

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A  L   +   N   +++T+N ++  +FK G   +A E+++ I    L P+I +Y++ + 
Sbjct: 687 ANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMIT 746

Query: 582 GL 583
            L
Sbjct: 747 NL 748



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 240/497 (48%), Gaps = 24/497 (4%)

Query: 133 PDVYSYGTVINGL--VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P +++Y  +I+    V   DL   LA+   + + G+  +   Y+ LI GF K G+  +A 
Sbjct: 174 PTIHTYNILIDCYRRVHRPDL--GLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 230

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++  + ME  V P ++  N +I  LCK    D+   +  +M  +    D FTY   I G
Sbjct: 231 CLFLEM-MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           LCK+  ++ AERV  +MVE+G   +++TYN++I G+  +G   E   +++ M   G +  
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 311 VSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V   N  I  L ++G+ +EA  I++ +  K    D  ++  +++G               
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT------------ 397

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 +  LAD  ++ N M   G   N +  N L+N + +   ++ A+ +F++M  KG 
Sbjct: 398 ----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 453

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V++ T+I+ LC++ R  +A      M++ G  P    Y  LI G C   ++  A +
Sbjct: 454 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 513

Query: 490 LCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           L  + + K   P  V  ++ +I+ LC  G+V +   +   M +    PN+VT+N+LM+G 
Sbjct: 514 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G+ ++A  + + +    + P+   Y   + G C   R+ DA     D L +G+ PT+
Sbjct: 574 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 633

Query: 609 ITWHILVRAVMNNGAST 625
           + + I++  +     +T
Sbjct: 634 VLYSIILHGLFQARRTT 650



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 266/567 (46%), Gaps = 35/567 (6%)

Query: 89  PDKALDVFQRMNE----------IFGCEAGILCRKR--QFEKAKRFLNSLWEKGLKPDVY 136
           P  A+++F+RM+           I      I C +R  + +     +  L + GL PD +
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 212

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY ++I G VK G++  A  +F EM E+GV   ++  N +I    K  +  +A+ I +++
Sbjct: 213 SY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 271

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V ++ + P++ TY+++I+GLCK    D+   + ++M +     +S TY S IHG   +G 
Sbjct: 272 V-DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
              + RV+++M   G+       N+ I    + G+  E   +++ M  KG   +++SY+ 
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390

Query: 316 LIRG--LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           ++ G     +  + +  +I+ L+  K    +     +LIN   + G ++KA+ I  +++ 
Sbjct: 391 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 450

Query: 374 GGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GRL DA    N M   G   +      L+ G     +L  
Sbjct: 451 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 510

Query: 417 AIFLFKEMSRKGCSPTVVSY-NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           A  L  EM  K   P  V Y +++IN LCK  R  E    +  M++ G +P+++T++ L+
Sbjct: 511 AKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 570

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            G C    ++ A  L       G  P+  +Y  L+ G C  G+++DAL ++ +M  +   
Sbjct: 571 EGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK 630

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P  V Y+ ++ GLF+      A ++++ ++E      I +Y + L GLC  +   +A   
Sbjct: 631 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 690

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L       +    IT++I++ A+   G
Sbjct: 691 LEKLFAMNVKFDIITFNIVISAMFKVG 717



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 258/548 (47%), Gaps = 35/548 (6%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           +P LF +  I+  L   K +    R+LE + ++    P  +   S+I  Y  + M ++++
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 94  DVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            VF++M+       +  C + I  L +  +  +AK   +S+  KG KPD+ SY T+++G 
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 146 VKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             + D  L     +F+ M  +G+  N   +NILI+ + + G   +A  I+E +     + 
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMI 454

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ VT+  +I+ LC+ GR D+ L  ++ M           Y   I G C  G +  A+ +
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 514

Query: 264 YREMVESGIFVDAVTY-NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
             EM+   I    V Y +++I+  C+ G++ E  ++ ++M + G   NVV++N L+ G  
Sbjct: 515 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 574

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G ++EA ++ + +       +   +G L++G CKNG                  R+ D
Sbjct: 575 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG------------------RIDD 616

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A ++   M   G K  +   + +++G  QA +   A  +F EM   G + ++ +Y  ++ 
Sbjct: 617 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 676

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+     EA   ++++     K D+IT++++I+ + +  +   A +L       G  P
Sbjct: 677 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 736

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  Y+++I  L      E+A  L+ +++K     +    N ++  L    +  KA    
Sbjct: 737 NIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 796

Query: 562 NHILEERL 569
           + I E  L
Sbjct: 797 SIIGENNL 804



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 18/393 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA      +  KG+ PD  ++ TVI+ L + G L  AL  F+ M + GV  +   Y  
Sbjct: 438 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 497

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI G    G+ ++AKE+   ++ +    P V  ++ +IN LCK GR  E  ++ D M + 
Sbjct: 498 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 557

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
            +  +  T+ S + G C  GN+E A  +   M   GI  +   Y  ++DG+C+ G+I + 
Sbjct: 558 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 617

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             ++  M  KG     V Y+I++ GL +  +   A  ++  + E        T+GV++ G
Sbjct: 618 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 677

Query: 355 LCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLN 397
           LC+N   ++A  +L ++                      GR  +A  L + +  +G   N
Sbjct: 678 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 737

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T + ++   I+    E A  LF  + + G +      N ++  L       +A +++ 
Sbjct: 738 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 797

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
            + E     +  T SLL +   +  K    +KL
Sbjct: 798 IIGENNLTLEASTISLLASLFSREGKYREHIKL 830



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 9/229 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +++  Y KN   D AL VF+ M        + ++      L + R+   AK+  + + E 
Sbjct: 603 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 662

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G    +++YG V+ GL ++     A  + +++F   V+ +++ +NI+I   FK G    A
Sbjct: 663 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 722

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           KE+++  +    + PN+ TY++MI  L K   ++E   ++  ++K+    DS      + 
Sbjct: 723 KELFDA-ISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 781

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            L     V  A      + E+ + ++A T + +   F R GK +E  +L
Sbjct: 782 MLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 830


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 239/446 (53%), Gaps = 21/446 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           ++  +INGLVK+G L+ A ++  E    G   ++  Y  ++D   K      A  + E+ 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEK- 59

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      P + TYN ++NGLCK GR +E +++  ++  N    D  TY S I GL K   
Sbjct: 60  ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
              A ++++EM   G+ +D V Y A+I G  +AGKI +   +++ M  +GC+ +VV+ + 
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG- 374
           +I GL + G++  A+ I++ +  +    +   +  LI+GLCK   ++ A+++L ++++  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 375 ----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             G +A A +  + M + GCK + YT N L++GF +A   + A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +F +MS   CSP VV+Y TLI+GLCK  +  +A  + + M E+G  PD   YS L++GL
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+S K++    L  +  + G     T   ++ H LC A +V++A+ L++ ++K   +P+ 
Sbjct: 360 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEG-MPHP 417

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHI 564
             YN+++  L K+G  ++   ++  +
Sbjct: 418 YAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 19/381 (4%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I+GL KAG +  A  + +E   +G  +D  TY  ++D   +  KI+E   L E +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              GC   + +YN L+ GL + G+++EAI +   + +  C  D  T+  LI+GL      
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL------ 114

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                       G + R  +A  L   M   G  L+     +L+ G +QA K+  A  ++
Sbjct: 115 ------------GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY 162

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           K M+ +GC P VV+ +T+I+GLCK  R G A    K M  +G  P+ + YS LI+GLC++
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           +K+D AL++  Q  +   TPD   YNILI GLC +G V  A   +  M +  C P++ TY
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N L+ G  K G+ D A  +++ +   R  P++++Y   + GLC   +++ A  +      
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342

Query: 602 RGILPTTITWHILVRAVMNNG 622
           RG  P +  +  LV  +  +G
Sbjct: 343 RGCPPDSFVYSSLVDGLCKSG 363



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 32/455 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           F  ++  L+   +++    + +      C        +++    KN    +A+ + +++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 101 EIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
              GC   I         LC+  + E+A   L  + + G  PDV +Y ++I+GL K    
Sbjct: 62  A-NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  +F EM  RG+  + VCY  LI G  + G   +A  +++ +  +  V P+VVT + 
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV-PDVVTLST 179

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           MI+GLCK GR    + ++  M+      +   Y + IHGLCKA  ++ A  +  +M ++ 
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              D +TYN +IDG C++G +      ++ M   GC  +V +YNILI G  + G  D A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +++ +    C+ +  T+G LI+GLCK   L K                  A+     M 
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK------------------ASLYYQHMK 341

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + GC  +++  +SL++G  ++ KLE    LF EM R G + +  +   LI  LCK  R  
Sbjct: 342 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKANRVD 400

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           EA S    + ++G  P    Y+ +I+ L +S K++
Sbjct: 401 EAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 434



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 15/343 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALF-DSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           V++   L++ L  +K    A  LF + A+R  G A     +  ++R L+    +   S +
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQAGKIPQASSV 161

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILC 111
            + +  Q C  P+ V LS +I    K      A+ +F+ M       NE+ +      LC
Sbjct: 162 YKTMTSQGCV-PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 220

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+ + A   L  + +    PD  +Y  +I+GL KSGD+  A A FDEM E G + +V 
Sbjct: 221 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVY 280

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YNILI GF K G+   A  +++ +   +   PNVVTY  +I+GLCK  +  +    +  
Sbjct: 281 TYNILISGFCKAGNTDAACGVFDDM-SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQH 339

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK+     DSF Y S + GLCK+G +EG   ++ EM  SG+  ++ T   +I   C+A +
Sbjct: 340 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANR 398

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
           + E   L+  + ++G  +  +YN +I  L+++GKV+E  ++++
Sbjct: 399 VDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQ 441


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 302/647 (46%), Gaps = 91/647 (14%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           L+ E N   AL  F   T    + H+P  +H ++ +L     +  +  IL  ++I++  C
Sbjct: 47  LRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPC 106

Query: 72  PEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
            +D  + V+ +Y  + + D+AL +F R+ E FGC                          
Sbjct: 107 SQDSFICVLNSYKNSGLGDRALKMFYRIKE-FGC-------------------------- 139

Query: 132 KPDVYSYGTVINGLV-KSGDLLGAL-AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           KP V  Y  +++ L+ +SG+    + AV++ M   G+E NV  YN+L+    K G    A
Sbjct: 140 KPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGA 199

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFI 248
            ++   +     V P+ V+Y  ++  +C+ GR +E  E+  R       +   + C + I
Sbjct: 200 CKLLVEMSKRGCV-PDGVSYTTVVAAMCEDGRVEEAREVARRFGA----EGVVSVCNALI 254

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
            GLC+ G V     +  EMV +G+  + V+Y+++I      G+++    +   M R+GC 
Sbjct: 255 CGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCR 314

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NV +++ L++G    G+V E + +W ++  +    +   +  L+NGLC +G        
Sbjct: 315 PNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSG-------- 366

Query: 368 LNEVEEGGEGRLADAASLVNRMDKH-GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      LA+A  +  RM+K   C+ N  T ++L++GF++A  L+ A  ++ +M  
Sbjct: 367 ----------NLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVN 416

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P VV Y ++++ LCK   F +AY  +  M   G  P ++T++  I GLC   ++  
Sbjct: 417 CGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLW 476

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+++  Q  + G  PD   YN L+ GL S  ++++A +L   +++R    NLVTYNT+M 
Sbjct: 477 AMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMY 536

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNIT--------------------------- 579
           G    G  +  L++   +L   ++PD I+ N+                            
Sbjct: 537 GFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELC 596

Query: 580 ---------LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
                    L G+C+   + +A  +LN  L +GI P   TW +LVR 
Sbjct: 597 PDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRG 643



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 15/269 (5%)

Query: 67  QKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQF 116
           + C+C  +V    +++  + K      A +V+ +M          ++     +LC+   F
Sbjct: 380 KDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMF 439

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A R ++++   G  P V ++ T I GL   G +L A+ V D+M   G   +   YN L
Sbjct: 440 DQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNEL 499

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +DG F   +   A E+   L  E  V  N+VTYN ++ G    G+ +  L++  RM  N 
Sbjct: 500 LDGLFSVNELKEACELIREL-EERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG--IFVDAVTYNAMIDGFCRAGKIKE 294
            + D+ T    I+   K G V  A + + + + +G  +  D + + +++ G C +  I+E
Sbjct: 559 VKPDAITVNVVIYAYSKLGKVRTAIQ-FLDRITAGKELCPDIIAHTSLLWGICNSLGIEE 617

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLE 322
                  M  KG   N+ ++++L+RG  +
Sbjct: 618 AIVYLNKMLNKGIFPNIATWDVLVRGFFK 646



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/157 (19%), Positives = 69/157 (43%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + ++A   +  L E+ ++ ++ +Y TV+ G    G     L V   M   GV+ + +  N
Sbjct: 508 ELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVN 567

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           ++I  + K G    A +  +R+     + P+++ +  ++ G+C     +E +   ++M  
Sbjct: 568 VVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLN 627

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
                +  T+   + G  K     G  R+  +++  G
Sbjct: 628 KGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 244/482 (50%), Gaps = 61/482 (12%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           + V  N ++ GLC  G   + LE  D +  N    +  +Y   I+GLC+ G V  A  + 
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 265 REMVE------SGIFV--DAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNI 315
           R + +       G FV  + V Y+ +ID  CR G + E FE + E+MG   C N  +Y  
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LIRGL   GK  E   + + +  +  +       VLI+GLCKNG L +A ++ +E+   G
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            +G +  A  L + + + G K + +T N  ++G+ +  ++ +A+
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +F EM R+G  P +V+YN+LI+ LCK      A+  VK M   G  PD++T  +L++GL
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+SK++D A+ L  Q ++ G TPDV  Y ILIHG C++ ++ +A+ L  +M  +N VP++
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHI 465

Query: 539 VTYNTLMDGLFKTG-----------------------------------DCDKALEIWNH 563
           VTY+ L+DGL ++G                                     D+A+ ++N 
Sbjct: 466 VTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQ 525

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +++  L PD++ Y I + G C   R+ +A     +   + ++P  +T+ IL  AV  +G+
Sbjct: 526 MIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585

Query: 624 ST 625
           ++
Sbjct: 586 NS 587



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 249/508 (49%), Gaps = 64/508 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR    ++   F N +   G+ P+ ++YG++I GL   G  L    + DEM  RG    
Sbjct: 195 LCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG---- 250

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
                                       ++ SVY     + V+I+GLCK G   E  EM+
Sbjct: 251 ----------------------------LDVSVY----VFTVLIDGLCKNGMLVEAREMF 278

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     E +  T  + + G C  GNV+ A  ++  + E G   D  TYN  I G+C+ 
Sbjct: 279 DEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKV 338

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++   +++ M R+G + N+V+YN LI  L + G+V  A  I + +       D  T 
Sbjct: 339 GRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTC 398

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++GLCK+  L++AI + N++ E G                     + ++   L++G 
Sbjct: 399 CILLDGLCKSKRLDQAILLFNQLVESG------------------LTPDVWSYTILIHGC 440

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             + ++  A+ L ++M  K   P +V+Y+ LI+GLC+  R   A+  + EM  KG  PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITYS+L++ L + + +D A+ L  Q +++G  PDV  Y I+I G C + ++++A+ L+  
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +N VP++VTY  L + +FK+G      +  N I +    P ++ Y   L  LC    
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEH 617

Query: 589 MSD---AFEFLNDALCRGILPTTITWHI 613
           +     A EF + A   G L T+++ HI
Sbjct: 618 LDYKCLASEFASYA---GSLQTSVSQHI 642



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 162/303 (53%), Gaps = 10/303 (3%)

Query: 79  VIQAYGKNSMPDKALDVFQRM------NEIFGCEA--GILCRKRQFEKAKRFLNSLWEKG 130
           +I    KN M  +A ++F  M        I  C A  G  C K   + A+   +++ E G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            K DV++Y   I+G  K G +  A+ VFDEM   GV  N+V YN LID   K G+   A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           EI  + +  + + P++VT  ++++GLCK  R D+ + +++++ ++    D ++Y   IHG
Sbjct: 381 EI-VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
            C +  +  A  + R+M    +    VTY+ +IDG CR+G+I   + L   M  KG L +
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            ++Y+IL+  L +   +DEA+ ++  + ++    D   + ++I+G CK+  +++AI +  
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559

Query: 370 EVE 372
           E+ 
Sbjct: 560 EMH 562



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           + C    LCR  +   A R LN +  KG  PD  +Y  +++ L K   L  A+ +F++M 
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI 527

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +RG+E +V+CY I+IDG+ K      A  ++  + M+  V P++VTY ++ N + K G
Sbjct: 528 KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV-PDIVTYTILFNAVFKSG 584


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 248/534 (46%), Gaps = 22/534 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +  +K   EK       +  KG  P V +   V+  L  S  +  A  V++ M   G+  
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMP 272

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            V+ +N ++D  FK GD  R  +IW  +      +  V TYN++ING  K G+ +E    
Sbjct: 273 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV-TYNILINGFSKSGKMEEARRF 331

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M+++      +++   I G CK G  + A  V  EM+ +GI+    TYN  I   C 
Sbjct: 332 HGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            G+I +  EL   M      +VVSYN L+ G ++  K  EA  +++ L+  N N    T+
Sbjct: 392 FGRIDDARELLSSMA---APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTY 448

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDK 391
             LI+GLC++G L  A ++  E+                      G L+ A  + + M +
Sbjct: 449 NTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLR 508

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFG 450
            G K + Y   +   G ++    E A  L +EM +    +P +  YN  I+GLCKV    
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLE 568

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A  F +++   G  PD +TY+ +I G  +  +  MA  L  + L K  +P V  Y +LI
Sbjct: 569 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLI 628

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           HG   AG++E A Q  + MKKR   PN++T+N L+ G+ K G+ D+A      + EE + 
Sbjct: 629 HGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGIS 688

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           P+  SY I +   C   +  +  +   + L + I P   T   L + +  +  S
Sbjct: 689 PNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 742



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 259/532 (48%), Gaps = 40/532 (7%)

Query: 83  YGKNSMPDKALDVFQRM------NEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPD 134
           Y K SM +K L  F++M        +  C     +L   R   KA+    ++   G+ P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V ++ T+++   K+GDL     ++ EM  R +E + V YNILI+GF K G    A+    
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 195 RLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
              M+ S +P    ++N +I G CK G FDE   + D M        + TY  +I  LC+
Sbjct: 334 D--MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VV 311
            G ++ A    RE++ S    D V+YN ++ G+ +  K  E   L++ + + G +N  +V
Sbjct: 392 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDL-KAGNINPSIV 446

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN LI GL E+G ++ A  + E +  +    D  T+  L+ G  KNG L+ A +I +E+
Sbjct: 447 TYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEM 506

Query: 372 ------EEG--------GEGRLAD---AASLVNRM---DKHGCKLNAYTCNSLMNGFIQA 411
                  +G        GE RL D   A  L   M   D H   L  Y  N  ++G  + 
Sbjct: 507 LRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIY--NVRIDGLCKV 564

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             LE AI   +++ R G  P  V+Y T+I G  +  RF  A     EML K   P +ITY
Sbjct: 565 GNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITY 624

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +LI+G  ++ +++ A +   +  ++G  P+V  +N L+HG+C AG +++A +    M++
Sbjct: 625 FVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEE 684

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
               PN  +Y  L+         ++ ++++  +L++ + PD  ++    K L
Sbjct: 685 EGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 269/558 (48%), Gaps = 28/558 (5%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGC------EAGILC-- 111
           L L+E +  + P+ V  + +I    + S+ ++A+D   RM     C       + +LC  
Sbjct: 249 LTLVETEN-FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGC 306

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR LN +  +G  P    + ++++    SGD   A  +  +M + G     
Sbjct: 307 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 366

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING---------LCKCGR 221
           V YNILI       D +     ++ L +    Y  ++   V++N          LC  G+
Sbjct: 367 VVYNILIGSICGDKDSLN----FDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 422

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           +++   +   M       D+ TY   ++ LC A  +E A  ++ EM   G+  D  TY  
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           M+D FC+AG I++  + +  M   GC  NVV+Y  LI   L+  KV  A  ++E +  + 
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C  +  T+  LI+G CK G + KA QI   +   G   + D      + D +  + N  T
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVT 600

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             +L++GF ++ ++E A  L   MS +GC P  + Y+ LI+GLCKV +  EA     EM 
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G+   + TYS LI+   + K+ D+A K+  + L+    P+V +Y  +I GLC  GK +
Sbjct: 661 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 720

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A +L   M+++ C PN+VTY  ++DG    G  +  LE+   +  + + P+ ++Y + +
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 581 KGLCSCSRMSDAFEFLND 598
              C    +  A   L +
Sbjct: 781 DHCCKNGALDVAHNLLEE 798



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 247/528 (46%), Gaps = 78/528 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   ++EKA   +  +  +G  PD  +Y  V+N L  +  +  A  +F+EM   G+  +
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y I++D F K G   +A++ W   + E    PNVVTY  +I+   K  +     E++
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARK-WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 535

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA------------- 276
           + M       +  TY + I G CKAG VE A +++  M  S    D              
Sbjct: 536 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 595

Query: 277 ---VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
              VTY A++DGFC++ +++E  +L + M  +GC  N + Y+ LI GL + GK+DEA  +
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
              + E    A   T+  LI+   K    + A ++L+++ E                   
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G+  +A  L+  M++ GC+ N  T  ++++GF    K+E  + L + M  KG +P  V+
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWK------------------------------ 465
           Y  LI+  CK      A++ ++EM +  W                               
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 835

Query: 466 ---PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM------YNILIHGLCSA 516
              P +  Y LLI+ L ++++++MAL+L    L++  T   T+      YN LI  LC A
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRL----LEEVATFSATLVDYSSTYNSLIESLCLA 891

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            KVE A QL+S M K+  +P + ++ +L+ GLF+     +AL + + I
Sbjct: 892 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 247/539 (45%), Gaps = 46/539 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    FE+A  FLN +      P+V +Y T++ G +    L     V + M   G   +
Sbjct: 271 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 330

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC-LEM 228
              +N L+  +   GD+  A ++ +++V +    P  V YN++I  +C  G  D    ++
Sbjct: 331 PKIFNSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSIC--GDKDSLNFDL 387

Query: 229 WDRMKKNEREK-------DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            D  +K   E        +     SF   LC AG  E A  V REM+  G   D  TY+ 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +++  C A K++  F L+E M R G + +V +Y I++    + G +++A   +  +RE  
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C  +  T+  LI+   K     K +   NE              L   M   GC  N  T
Sbjct: 508 CTPNVVTYTALIHAYLKA----KKVSYANE--------------LFETMLSEGCLPNIVT 549

Query: 401 CNSLMNGFIQASKLENA--IF--------------LFKEMSRKGCSPTVVSYNTLINGLC 444
            ++L++G  +A ++E A  IF               FK+       P VV+Y  L++G C
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  R  EA   +  M  +G +P+ I Y  LI+GLC+  K+D A ++  +  + GF   + 
Sbjct: 610 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 669

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y+ LI       + + A ++ S M + +C PN+V Y  ++DGL K G  D+A ++   +
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E+  +P++++Y   + G     ++    E L     +G+ P  +T+ +L+     NGA
Sbjct: 730 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 788



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 219/477 (45%), Gaps = 85/477 (17%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C+AG++      E+A+++ N + E G  P+V +Y  +I+  +K+  +  A  +F+ M   
Sbjct: 488 CKAGLI------EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 541

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERL-----VMETSVY----------PNVVTY 209
           G   N+V Y+ LIDG  K G   +A +I+ER+     V +  +Y          PNVVTY
Sbjct: 542 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 601

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             +++G CK  R +E  ++ D M     E +   Y + I GLCK G ++ A+ V  EM E
Sbjct: 602 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 661

Query: 270 SGI---------FVD--------------------------AVTYNAMIDGFCRAGKIKE 294
            G           +D                           V Y  MIDG C+ GK  E
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            ++L ++M  KGC  NVV+Y  +I G    GK++  + + E +  K    +  T+ VLI+
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781

Query: 354 GLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
             CKNG L+ A  +L E+++       A    ++   +K                FI++ 
Sbjct: 782 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE---------------FIES- 825

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI--- 469
                + L  E+ +   +P +  Y  LI+ L K +R   A   ++E+    +   ++   
Sbjct: 826 -----LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYS 878

Query: 470 -TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            TY+ LI  LC + K++ A +L  +  +KG  P++  +  LI GL    K+ +AL L
Sbjct: 879 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 935



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 196/470 (41%), Gaps = 64/470 (13%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFD 223
           G +     YN L+D   +  D    +E  +++  +   V+   +  NV++   C+ G F 
Sbjct: 119 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFL--NVLVRKHCRNGSFS 176

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             LE   R+K         TY   I    KA  ++ A  ++REM  + + +D  T     
Sbjct: 177 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 236

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
              C+ GK +E   L E        + V Y  LI GL E    +EA+     +R  +C  
Sbjct: 237 YSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  L   LC  G LNK              +L     ++N M   GC  +    NS
Sbjct: 295 NVVTYSTL---LC--GCLNKK-------------QLGRCKRVLNMMMMEGCYPSPKIFNS 336

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING--------------------- 442
           L++ +  +     A  L K+M + G  P  V YN LI                       
Sbjct: 337 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYS 396

Query: 443 --------------------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                               LC   ++ +A+S ++EM+ +G+ PD  TYS ++N LC + 
Sbjct: 397 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 456

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+++A  L  +  + G   DV  Y I++   C AG +E A + ++ M++  C PN+VTY 
Sbjct: 457 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 516

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            L+    K      A E++  +L E   P+I++Y+  + G C   ++  A
Sbjct: 517 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 566



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P+  +YN LI    K +R   A    +EM     + D  T       LC+  K   AL L
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                 + F PD   Y  LI GLC A   E+A+   + M+  +C+PN+VTY+TL+ G   
Sbjct: 252 V---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                +   + N ++ E   P    +N  +   C+    S A++ L   +  G +P  + 
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368

Query: 611 WHILVRAV 618
           ++IL+ ++
Sbjct: 369 YNILIGSI 376



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 3/186 (1%)

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L+   C+   F  A   +  + +  ++P   TY+ LI    ++ ++D A  +  +   
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                D        + LC  GK  +AL L   ++  N VP+ V Y  L+ GL +    ++
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 279

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A++  N +      P++++Y+  L G  +  ++      LN  +  G  P+   ++ LV 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 617 AVMNNG 622
           A   +G
Sbjct: 340 AYCTSG 345


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 251/505 (49%), Gaps = 19/505 (3%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           +++F   +   G+K  V++Y  +I+ L K GDL  A ++F +M E G   ++V YN LID
Sbjct: 239 SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 298

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  K G       I+E++  +    P+V+TYN +IN  CK  R  +  E    MK N  +
Sbjct: 299 GHGKLGLLDECICIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +  TY +FI   CK G ++ A + + +M    +  +  TY ++ID  C+AG + E  +L
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            E + + G  LNVV+Y  L+ GL E G++ EA  ++  +       +  T+  L++G  K
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477

Query: 358 NGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYT 400
              +  A  IL E++E                   E RL +A  L+  + + G   NA  
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 537

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             +LM+ + ++ +   A+ L +EM   G   T V+Y  LI+GLCK     EA      M 
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G +P++  Y+ L++GLC++   ++A KL  + L KG  PD   Y  LI G    G ++
Sbjct: 598 EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 657

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +AL L   M +     +L  Y  L+ GL  +G   KA  + + ++ + + PD + Y   +
Sbjct: 658 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717

Query: 581 KGLCSCSRMSDAFEFLNDALCRGIL 605
           K   +  ++ +A E  N+   RG++
Sbjct: 718 KKYYALGKVDEALELQNEMAKRGMI 742



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 228/482 (47%), Gaps = 54/482 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++   E A+     + E G  PD+ +Y ++I+G  K G L   + +F++M +   + +
Sbjct: 265 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 324

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN LI+ F K     +A E    +     + PNVVTY+  I+  CK G   E ++ +
Sbjct: 325 VITYNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     + FTY S I   CKAGN+  A ++  E++++GI ++ VTY A++DG C  
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++KE  E++  M   G   N  +Y  L+ G ++  +++ A  I + ++EK    D   +
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G ++ GLC    L +A  ++ E++E G                  G+  +A +L+  M  
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G      T  +L++G  ++  ++ A+  F  MS  G  P V  Y  L++GLCK   F  
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 452 AYSFVKEMLEKGWKPDMITYSLLING---------------------------------- 477
           A     EML+KG  PD I Y+ LI+G                                  
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683

Query: 478 -LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            L  S ++  A  L  + + KG  PD  +Y  LI    + GKV++AL+L + M KR  + 
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743

Query: 537 NL 538
            L
Sbjct: 744 GL 745



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 211/439 (48%), Gaps = 18/439 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V+P   + N +++ L K GR D   + +  M     ++  FTY   I  LCK G++E A 
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 275

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++ +M E+G   D VTYN++IDG  + G + EC  ++E M    C  +V++YN LI   
Sbjct: 276 SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 335

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +  ++ +A      ++      +  T+   I+  CK G L +AI+   ++         
Sbjct: 336 CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 395

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G LA+A  LV  + + G KLN  T  +L++G  +  +++ A  +F+ 
Sbjct: 396 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 455

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G +P   +Y  L++G  K +    A   +KEM EK  KPD++ Y  ++ GLC   +
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ++ A  L  +  + G   +  +Y  L+     +G+  +AL L   M     +   VTY  
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+DGL K+G   +A+  +  + E  L+P++  Y   + GLC  +    A +  ++ L +G
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635

Query: 604 ILPTTITWHILVRAVMNNG 622
           ++P  I +  L+   M +G
Sbjct: 636 MMPDKIAYTALIDGNMKHG 654



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 181/381 (47%), Gaps = 19/381 (4%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           +    L + G +E A   + +M +  +F    + NA++    + G+     + ++ MG  
Sbjct: 190 ALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA 249

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   +V +YNI+I  L + G ++ A S++  ++E     D  T+  LI+G  K G L++ 
Sbjct: 250 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 309

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           I I  ++++                    C  +  T N+L+N F +  ++  A     EM
Sbjct: 310 ICIFEQMKDAD------------------CDPDVITYNALINCFCKFERMPKAFEFLHEM 351

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G  P VV+Y+T I+  CK     EA  F  +M      P+  TY+ LI+  C++  +
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             ALKL  + LQ G   +V  Y  L+ GLC  G++++A +++  M      PN  TY  L
Sbjct: 412 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G  K  + + A +I   + E+ ++PD++ Y   L GLC+ SR+ +A   + +    GI
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531

Query: 605 LPTTITWHILVRAVMNNGAST 625
               + +  L+ A   +G +T
Sbjct: 532 NTNAVIYTTLMDAYFKSGQAT 552



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 160/358 (44%), Gaps = 25/358 (6%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS---------RILELIEIQ 67
           N  T  +L D+  +    A +  L   IL+  I   +V + +         R+ E  E+ 
Sbjct: 394 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 453

Query: 68  KCYCPEDVA------LSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
           +      VA       +++  + K    + A D+ + M E        ++G     LC +
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + E+AK  +  + E G+  +   Y T+++   KSG    AL + +EM + G+    V Y
Sbjct: 514 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             LIDG  K G    A   + R+  E  + PNV  Y  +++GLCK   F+   +++D M 
Sbjct: 574 CALIDGLCKSGLVQEAMHHFGRMS-EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEML 632

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D   Y + I G  K GN++ A  +   M+E G+ +D   Y A+I G   +G+++
Sbjct: 633 DKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQ 692

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +   L + M  KG L + V Y  LI+     GKVDEA+ +   + ++      + H V
Sbjct: 693 KARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 750



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 96/198 (48%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           +R  C P    ++ L + L ++    EA     +M +    P   + + L++ L +  + 
Sbjct: 177 TRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRG 236

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D++ K        G    V  YNI+I  LC  G +E A  L++ MK+    P++VTYN+L
Sbjct: 237 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DG  K G  D+ + I+  + +    PD+I+YN  +   C   RM  AFEFL++    G+
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356

Query: 605 LPTTITWHILVRAVMNNG 622
            P  +T+   + A    G
Sbjct: 357 KPNVVTYSTFIDAFCKEG 374


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 268/555 (48%), Gaps = 22/555 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGC------EAGILC-- 111
           L L+E +  + P+ V  + +I    + S+ ++A+D   RM     C       + +LC  
Sbjct: 290 LTLVETEN-FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGC 347

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR LN +  +G  P    + ++++    SGD   A  +  +M + G     
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407

Query: 171 VCYNILIDGFFKKGDYMR------AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           V YNILI       D +       A++ +  + +   V  N +  +     LC  G++++
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEM-LAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +   M       D+ TY   ++ LC A  +E A  ++ EM   G+  D  TY  M+D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            FC+AG I++  + +  M   GC  NVV+Y  LI   L+  KV  A  ++E +  + C  
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI+G CK G + KA QI   +   G   + D      + D +  + N  T  +
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF ++ ++E A  L   MS +GC P  + Y+ LI+GLCKV +  EA     EM E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +   + TYS LI+   + K+ D+A K+  + L+    P+V +Y  +I GLC  GK ++A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG    G  +  LE+   +  + + P+ ++Y + +   
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824

Query: 584 CSCSRMSDAFEFLND 598
           C    +  A   L +
Sbjct: 825 CKNGALDVAHNLLEE 839



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 244/537 (45%), Gaps = 42/537 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    FE+A  FLN +      P+V +Y T++ G +    L     V + M   G   +
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC------KCGRFD 223
              +N L+  +   GD+  A ++ +++V +    P  V YN++I  +C       C   D
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              + +  M       +     SF   LC AG  E A  V REM+  G   D  TY+ ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +  C A K++  F L+E M R G + +V +Y I++    + G +++A   +  +RE  C 
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  T+  LI+   K     K +   NE              L   M   GC  N  T +
Sbjct: 551 PNVVTYTALIHAYLKA----KKVSYANE--------------LFETMLSEGCLPNIVTYS 592

Query: 403 SLMNGFIQASKLENA--IF--------------LFKEMSRKGCSPTVVSYNTLINGLCKV 446
           +L++G  +A ++E A  IF               FK+       P VV+Y  L++G CK 
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA   +  M  +G +P+ I Y  LI+GLC+  K+D A ++  +  + GF   +  Y
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           + LI       + + A ++ S M + +C PN+V Y  ++DGL K G  D+A ++   + E
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  +P++++Y   + G     ++    E L     +G+ P  +T+ +L+     NGA
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 247/528 (46%), Gaps = 78/528 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   ++EKA   +  +  +G  PD  +Y  V+N L  +  +  A  +F+EM   G+  +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y I++D F K G   +A++ W   + E    PNVVTY  +I+   K  +     E++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARK-WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA------------- 276
           + M       +  TY + I G CKAG VE A +++  M  S    D              
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636

Query: 277 ---VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
              VTY A++DGFC++ +++E  +L + M  +GC  N + Y+ LI GL + GK+DEA  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
              + E    A   T+  LI+   K    + A ++L+++ E                   
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G+  +A  L+  M++ GC+ N  T  ++++GF    K+E  + L + M  KG +P  V+
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWK------------------------------ 465
           Y  LI+  CK      A++ ++EM +  W                               
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 466 ---PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM------YNILIHGLCSA 516
              P +  Y LLI+ L ++++++MAL+L    L++  T   T+      YN LI  LC A
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRL----LEEVATFSATLVDYSSTYNSLIESLCLA 932

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            KVE A QL+S M K+  +P + ++ +L+ GLF+     +AL + + I
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 196/470 (41%), Gaps = 64/470 (13%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFD 223
           G +     YN L+D   +  D    +E  +++  +   V+   +  NV++   C+ G F 
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFL--NVLVRKHCRNGSFS 217

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             LE   R+K         TY   I    KA  ++ A  ++REM  + + +D  T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
              C+ GK +E   L E        + V Y  LI GL E    +EA+     +R  +C  
Sbjct: 278 YSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  L   LC  G LNK              +L     ++N M   GC  +    NS
Sbjct: 336 NVVTYSTL---LC--GCLNKK-------------QLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING--------------------- 442
           L++ +  +     A  L K+M + G  P  V YN LI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437

Query: 443 --------------------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                               LC   ++ +A+S ++EM+ +G+ PD  TYS ++N LC + 
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+++A  L  +  + G   DV  Y I++   C AG +E A + ++ M++  C PN+VTY 
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            L+    K      A E++  +L E   P+I++Y+  + G C   ++  A
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 257/511 (50%), Gaps = 32/511 (6%)

Query: 118 KAKRFLN--SLWEK----GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           K KR+ +  SL+++    GL PD  +   +IN       +   LAV  EM  RG   N V
Sbjct: 104 KIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTV 163

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            +  L+ G         A  +  ++V      PNVVTY  ++NGLC  G     +++ + 
Sbjct: 164 TFTSLVKGLCLGSRISEATGLLRKMV-RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222

Query: 232 MKKNER------EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           M           + +   YC+ I  LCK G ++  + ++ EM   GI  D V Y+++I G
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C  G+ +    L+  M  +G   NVV++N+LI  L + GK++EA  + +L+ ++  + D
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + T+  LI+G C                   EGR+ DA  L   M+  G + +A + N L
Sbjct: 343 TFTYNTLIDGFCL------------------EGRIDDARDLFVSMESKGIETDAVSYNVL 384

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG+ ++ ++  A  L++EM  K   PTV++YNTL+ GL +  +  +A++   EM     
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDL 444

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+  TY++L++GLC++  +  A++L        F P + ++N LI GLC A K+E A +
Sbjct: 445 TPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARE 504

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L++ +      PN++TY  ++ GL K+G  + A +++  + E+   P+++++N  ++G C
Sbjct: 505 LFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFC 564

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILV 615
               M    E L +   +   P   T  I+V
Sbjct: 565 QNDEMQKVVELLQEMAEKDFSPDASTISIVV 595



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 272/549 (49%), Gaps = 39/549 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           +F+H++     P +    + +  + +I++ +        VI  Y + S+   A D F  +
Sbjct: 79  VFNHLIDMQPTPPISSFNTLLGAVAKIKRYF-------DVISLYKRMSLIGLAPD-FITL 130

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           N +  C     C   + +     L  +  +G  P+  ++ +++ GL     +  A  +  
Sbjct: 131 NILINC----YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLR 186

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV-----METSVYPNVVTYNVMIN 214
           +M   G   NVV Y  L++G    G+ M A ++ E ++        ++ PN+V Y  +I+
Sbjct: 187 KMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIID 246

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            LCK G  D+  E++  MK      D   Y S IHG+C  G  EGA+ ++ EMV+ G+  
Sbjct: 247 SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP 306

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
           + VT+N +ID  C+AGK++E   L ++M ++G   +  +YN LI G    G++D+A  ++
Sbjct: 307 NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF 366

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE---------------EG--GE 376
             +  K    D+ ++ VLING CK+G + +A ++  E+                 G   E
Sbjct: 367 VSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFRE 426

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G++ DA +L   M  H     + T N L++G  + + L  A+ LF  +      P++  +
Sbjct: 427 GKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIF 486

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LI+GLCK  +   A      +  +G +P++ITY+++I+GLC+S +++ A  L     +
Sbjct: 487 NCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEE 546

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           KG  P++  +N L+ G C   +++  ++L   M +++  P+  T + ++D L K    D+
Sbjct: 547 KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK----DE 602

Query: 557 ALEIWNHIL 565
               + H+L
Sbjct: 603 KYREYLHLL 611



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 264/543 (48%), Gaps = 39/543 (7%)

Query: 89  PDKA-LDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           PD+  L+ F + N    C++G + R   F       N L +    P + S+ T++  + K
Sbjct: 53  PDRGQLENFLKSN----CKSGHIKRSEAFS----VFNHLIDMQPTPPISSFNTLLGAVAK 104

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGF--FKKGDYMRAKEIWERLVMETSVYPN 205
                  ++++  M   G+  + +  NILI+ +    K D+  A  + E L    S  PN
Sbjct: 105 IKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV-LGEMLRRGHS--PN 161

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
            VT+  ++ GLC   R  E   +  +M +     +  TY + ++GLC  GN   A +++ 
Sbjct: 162 TVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHE 221

Query: 266 EMVESG------IFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIR 318
           EM+         I  + V Y  +ID  C+ G I +  EL+ E+ GR    +VV+Y+ +I 
Sbjct: 222 EMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIH 281

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G+   G+ + A  ++  + ++  + +  T  VLI+ LCK                   G+
Sbjct: 282 GMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCK------------------AGK 323

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +A  L+  M + G   + +T N+L++GF    ++++A  LF  M  KG     VSYN 
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LING CK  R  EA    +EM+ K   P +ITY+ L+ GL +  K+  A  L  +     
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            TP+   YNIL+ GLC    + +A++L+  ++  +  P++  +N L+DGL K    + A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           E++N +  E L P++I+Y + + GLC   ++ +A +       +G  P  +T++ L+R  
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563

Query: 619 MNN 621
             N
Sbjct: 564 CQN 566



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 224/476 (47%), Gaps = 26/476 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A +VF+ + +      +  +N L+    K   Y     +++R+ +   + P+ +T N++I
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL-IGLAPDFITLNILI 134

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C   + D  L +   M +     ++ T+ S + GLC    +  A  + R+MV  G  
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGC-----LNVVSYNILIRGLLENGKV 326
            + VTY  +++G C  G      +L E M  G  G       N+V Y  +I  L ++G +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+   ++  ++ +  + D   +  +I+G+C  G                  R   A  L 
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTG------------------RWEGAKGLF 296

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           N M   G   N  T N L++   +A K+E A  L K M ++G SP   +YNTLI+G C  
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLE 356

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A      M  KG + D ++Y++LING C+S ++  A KL  + + K   P V  Y
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITY 416

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N L+ GL   GKV DA  L+  MK  +  P   TYN L+DGL K     +A+E+++++  
Sbjct: 417 NTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLEN 476

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +P I  +N  + GLC   ++  A E  N     G+ P  IT+ +++  +  +G
Sbjct: 477 HDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 268/555 (48%), Gaps = 22/555 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGC------EAGILC-- 111
           L L+E +  + P+ V  + +I    + S+ ++A+D   RM     C       + +LC  
Sbjct: 290 LTLVETEN-FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGC 347

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR LN +  +G  P    + ++++    SGD   A  +  +M + G     
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407

Query: 171 VCYNILIDGFFKKGDYMR------AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           V YNILI       D +       A++ +  + +   V  N +  +     LC  G++++
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEM-LAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +   M       D+ TY   ++ LC A  +E A  ++ EM   G+  D  TY  M+D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            FC+AG I++  + +  M   GC  NVV+Y  LI   L+  KV  A  ++E +  + C  
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI+G CK G + KA QI   +   G   + D      + D +  + N  T  +
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF ++ ++E A  L   MS +GC P  + Y+ LI+GLCKV +  EA     EM E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +   + TYS LI+   + K+ D+A K+  + L+    P+V +Y  +I GLC  GK ++A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG    G  +  LE+   +  + + P+ ++Y + +   
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824

Query: 584 CSCSRMSDAFEFLND 598
           C    +  A   L +
Sbjct: 825 CKNGALDVAHNLLEE 839



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 244/537 (45%), Gaps = 42/537 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    FE+A  FLN +      P+V +Y T++ G +    L     V + M   G   +
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC------KCGRFD 223
              +N L+  +   GD+  A ++ +++V +    P  V YN++I  +C       C   D
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              + +  M       +     SF   LC AG  E A  V REM+  G   D  TY+ ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +  C A K++  F L+E M R G + +V +Y I++    + G +++A   +  +RE  C 
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  T+  LI+   K     K +   NE              L   M   GC  N  T +
Sbjct: 551 PNVVTYTALIHAYLKA----KKVSYANE--------------LFETMLSEGCLPNIVTYS 592

Query: 403 SLMNGFIQASKLENA--IF--------------LFKEMSRKGCSPTVVSYNTLINGLCKV 446
           +L++G  +A ++E A  IF               FK+       P VV+Y  L++G CK 
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  EA   +  M  +G +P+ I Y  LI+GLC+  K+D A ++  +  + GF   +  Y
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           + LI       + + A ++ S M + +C PN+V Y  ++DGL K G  D+A ++   + E
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           +  +P++++Y   + G     ++    E L     +G+ P  +T+ +L+     NGA
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 160/628 (25%), Positives = 274/628 (43%), Gaps = 127/628 (20%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------------------- 99
           R+L ++ ++ CY    +  S++ AY  +     A  + ++M                   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 100 ---NEIFGCE--------------AGI-------------LCRKRQFEKAKRFLNSLWEK 129
               +   C+              AG+             LC   ++EKA   +  +  +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD  +Y  V+N L  +  +  A  +F+EM   G+  +V  Y I++D F K G   +A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++ W   + E    PNVVTY  +I+   K  +     E+++ M       +  TY + I 
Sbjct: 538 RK-WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 250 GLCKAGNVEGAERVYREMVESGIFVD----------------AVTYNAMIDGFCRAGKIK 293
           G CKAG VE A +++  M  S    D                 VTY A++DGFC++ +++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  +L + M  +GC  N + Y+ LI GL + GK+DEA  +   + E    A   T+  LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           +   K    + A ++L+++ E                    G+  +A  L+  M++ GC+
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N  T  ++++GF    K+E  + L + M  KG +P  V+Y  LI+  CK      A++ 
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 456 VKEMLEKGWK---------------------------------PDMITYSLLINGLCQSK 482
           ++EM +  W                                  P +  Y LLI+ L +++
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896

Query: 483 KIDMALKLCCQFLQKGFTPDVTM------YNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           +++MAL+L    L++  T   T+      YN LI  LC A KVE A QL+S M K+  +P
Sbjct: 897 RLEMALRL----LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            + ++ +L+ GLF+     +AL + + I
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 196/470 (41%), Gaps = 64/470 (13%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFD 223
           G +     YN L+D   +  D    +E  +++  +   V+   +  NV++   C+ G F 
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFL--NVLVRKHCRNGSFS 217

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             LE   R+K         TY   I    KA  ++ A  ++REM  + + +D  T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
              C+ GK +E   L E        + V Y  LI GL E    +EA+     +R  +C  
Sbjct: 278 YSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  L   LC  G LNK              +L     ++N M   GC  +    NS
Sbjct: 336 NVVTYSTL---LC--GCLNKK-------------QLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING--------------------- 442
           L++ +  +     A  L K+M + G  P  V YN LI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437

Query: 443 --------------------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                               LC   ++ +A+S ++EM+ +G+ PD  TYS ++N LC + 
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+++A  L  +  + G   DV  Y I++   C AG +E A + ++ M++  C PN+VTY 
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            L+    K      A E++  +L E   P+I++Y+  + G C   ++  A
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 248/497 (49%), Gaps = 32/497 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R+ + ++A R + S      +PD  +   +I  L  SG    A  V           +
Sbjct: 75  LVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 125

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN ++ G+   G    A+    RLV E  V P+  TYN +I GLC  GR    L + 
Sbjct: 126 VMAYNAMVAGYCGAGQLDAAR----RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     D  TY   +   CK    + A ++  EM + G   D VTYN +++G C+ 
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  E  + +   GC  N VSYNI+++GL    + ++A  +   + +K C  +  T 
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+ LC+ G +  A+++L ++                   K+GC  N+ + N L++ F
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIP------------------KYGCTPNSLSYNPLLHAF 343

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ A+     M  +GC P +VSYNTL+  LC+      A   + ++ +KG  P +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL ++ K   AL+L  + + KG  PD+  Y+ +  GLC   ++EDA++ +  
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++     PN V YN ++ GL K  +   A++++ +++     P+  +Y I ++GL     
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523

Query: 589 MSDAFEFLNDALCRGIL 605
           + +A + L++   RG++
Sbjct: 524 IKEARDLLDELCSRGVV 540



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 223/431 (51%), Gaps = 28/431 (6%)

Query: 187 MRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           +R  E+ E L ++ ++  P+  T   +I  L   GR  E   +           D   Y 
Sbjct: 76  VRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGP-----DVMAYN 130

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + + G C AG ++ A R+  EM    +  DA TYN +I G C  G+      + + M R+
Sbjct: 131 AMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 187

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
            C+ +VV+Y IL+    +     +A+ + + +R+K C  D  T+ V++NG+C+       
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ------- 240

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      EGR+ DA   +  +  +GC+ N  + N ++ G   A + E+A  L  EM
Sbjct: 241 -----------EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            +KGC P VV++N LI+ LC+      A   ++++ + G  P+ ++Y+ L++  C+ KK+
Sbjct: 290 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 349

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+      + +G  PD+  YN L+  LC +G+V+ A++L   +K + C P L++YNT+
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 409

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G   +ALE+ N ++ + L+PDII+Y+    GLC   R+ DA          GI
Sbjct: 410 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469

Query: 605 LPTTITWHILV 615
            P T+ ++ ++
Sbjct: 470 RPNTVLYNAII 480



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 29/377 (7%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  L + G ++ A R    +V S    DA T  A+I     +G+  E   +    G    
Sbjct: 72  LRSLVRRGELDEALR----LVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGP--- 124

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V++YN ++ G    G++D A     L+ E     D+ T+  LI GLC           
Sbjct: 125 -DVMAYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLC----------- 169

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                  G GR A+A ++++ M +  C  +  T   L+    + S  + A+ L  EM  K
Sbjct: 170 -------GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 222

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           GC+P +V+YN ++NG+C+  R  +A  F+K +   G +P+ ++Y++++ GLC +++ + A
Sbjct: 223 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 282

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  +  QKG  P+V  +N+LI  LC  G VE AL++   + K  C PN ++YN L+  
Sbjct: 283 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 342

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K    DKA+   + ++     PDI+SYN  L  LC    +  A E L+    +G  P 
Sbjct: 343 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 402

Query: 608 TITWHILVRAVMNNGAS 624
            I+++ ++  +   G +
Sbjct: 403 LISYNTVIDGLTKAGKT 419


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 255/519 (49%), Gaps = 22/519 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETN 169
           CR R+ +    F   L   GL+       T +  L  +     A+ V    M + G   N
Sbjct: 167 CRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPN 226

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
            + YN +I           A ++ +R+  E     P+VV++N +I+G  K G   +   +
Sbjct: 227 AISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNL 286

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + M +   E D  TY S +  LCKA  ++ AE V R+MV+ G+  D +TY A+I G+  
Sbjct: 287 INEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSC 346

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +G  KE  +++  M  KG +  +V++N  +  L ++G+  +A  I++ +  K    D  +
Sbjct: 347 SGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVS 406

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +L++G                     EGR AD  +L + M   G   N +  N L++ 
Sbjct: 407 YSILLHGYAT------------------EGRFADMNNLFHSMADKGIVANCHCFNILISA 448

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   ++ A+ +F EM  +G  P VV+Y+TLI+  C++ R  +A     +M+  G +P+
Sbjct: 449 HAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPN 508

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKVEDALQLY 526
            + Y  LI+G C    +  A +L  + + KG   P++  ++ +IH LC+ G+V DA  ++
Sbjct: 509 TVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF 568

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + +      P +VT+N+L+DG    G  +KA  + + ++   + PD+++YN  + G C  
Sbjct: 569 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKS 628

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            ++ D      + L + + PTT+T+ I++  + + G ++
Sbjct: 629 GKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTS 667



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 165/636 (25%), Positives = 298/636 (46%), Gaps = 53/636 (8%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D   R       P  F  +LR  +        +R +E     KC C       
Sbjct: 157 HTYGILMDCCCRARRPDLGPAFFARLLRAGLR-------TRTIEANTFLKCLC------- 202

Query: 79  VIQAYGKNSMPDKALDVF-QRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
               + K +  D+A+DV   RM+++ GC             LC   + ++A   +  + +
Sbjct: 203 ----HAKRT--DEAVDVLLHRMSDL-GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAK 255

Query: 129 KGLK--PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
           +G +  PDV S+ TVI+G  K G++  A  + +EM ++GVE +VV YN ++D   K    
Sbjct: 256 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK-ARA 314

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           M   E+  R +++  V P+ +TY  +I+G    G + E  +M+ +M          T+ S
Sbjct: 315 MDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNS 374

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           F+  LCK G  + AE +++ M   G   D V+Y+ ++ G+   G+  +   L+  M  KG
Sbjct: 375 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            + N   +NILI    + G +DEA+ ++  ++ +    D  T+  LI+  C+ G L  A+
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAM 494

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGC-KLNAYTCNSLMNG 407
           +  +++   G                  G L  A  LV+ M   G  + N    +S+++ 
Sbjct: 495 EKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHS 554

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                ++ +A  +F  +   G  PT+V++N+LI+G C V +  +A+  +  M+  G +PD
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+ L++G C+S KID  L L  + L K   P    Y+I++ GL  AG+   A +++ 
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M       ++ TY  L+ GL +    D+A+ +++ +     + DI   N  +  L    
Sbjct: 675 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVR 734

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           R  +A +        G++P   T+ +++  ++  G+
Sbjct: 735 RREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/574 (24%), Positives = 277/574 (48%), Gaps = 30/574 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILC---------RKRQFEKAKRFLNSLW 127
           +VI++   +S   +ALD+ QRM +  G C   ++          ++ +  KA   +N + 
Sbjct: 232 TVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMV 291

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +KG++PDV +Y ++++ L K+  +  A  V  +M ++GVE + + Y  +I G+   G + 
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK 351

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            + +++ ++     + P +VT+N  ++ LCK GR  +  E++  M       D  +Y   
Sbjct: 352 ESAKMFRKMT-SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSIL 410

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +HG    G       ++  M + GI  +   +N +I    + G + E   ++  M  +G 
Sbjct: 411 LHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +VV+Y+ LI      G++ +A+  +  +       ++  +  LI+G C +G L KA +
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530

Query: 367 ILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           +++E+   G                  EGR+ DA  + N +   G +    T NSL++G+
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               K+E A  +   M   G  P VV+YNTL++G CK  +  +     +EML K  KP  
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TYS++++GL  + +   A K+  + +  G   D+  Y IL+ GLC     ++A+ L+  
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +   +C  ++   NT+++ L+K    ++A +++  I    L P++ +Y + +  L     
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +A    +     G  P++   + ++R ++  G
Sbjct: 771 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQA-SKLENAI----------FLFKEMSRKGC 429
           DA  L + + + G  ++    N  +NGF+ A ++  +++           LF  + R+  
Sbjct: 92  DAHHLFDELLRQGTPVH----NPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEA 147

Query: 430 SPTVV-----SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            P V      +Y  L++  C+  R     +F   +L  G +   I  +  +  LC +K+ 
Sbjct: 148 GPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRT 207

Query: 485 DMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN--CVPNLVTY 541
           D A+ +    +   G  P+   YN +I  LC   + ++AL +   M K    C P++V++
Sbjct: 208 DEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSF 267

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NT++ G FK G+  KA  + N ++++ + PD+++YN  +  LC    M  A   L   + 
Sbjct: 268 NTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVD 327

Query: 602 RGILPTTITWHILVRAVMNNG 622
           +G+ P  +T+  ++     +G
Sbjct: 328 KGVEPDGLTYTAIIHGYSCSG 348



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 44/260 (16%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           S+I  Y      +KA  V   M  + G E  ++         C+  + +        +  
Sbjct: 585 SLIDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLH 643

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K +KP   +Y  V++GL  +G    A  +F EM + G   ++  Y IL+ G  +      
Sbjct: 644 KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 703

Query: 189 AKEIWERL----------------------------------VMETSVYPNVVTYNVMIN 214
           A  ++ +L                                  +  + + PNV TY VMI+
Sbjct: 704 AITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIH 763

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            L K G  +E   M+  M+K+     S      I  L + G++  A     ++  + I +
Sbjct: 764 NLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISL 823

Query: 275 DAVTYNAMIDGFCRAGKIKE 294
           +A T + ++  F   GK +E
Sbjct: 824 EASTTSLLMSLFSSKGKHRE 843


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 240/471 (50%), Gaps = 20/471 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F EM        +V ++       +   +    +  ++L +   +  N+ T N+MI
Sbjct: 72  AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMI 130

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+C +      +  ++ K   E D+ T+ + I+GLC  G V  A  +   MVE+G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            D VTYN++++G CR+G     F++   M  +    +V +Y+ +I  L  +G +D AIS+
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  K   +   T+  L+ GLCK G  N                  D A L+  M   
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWN------------------DGALLLKDMVSR 292

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N  T N L++ F++  KL+ A  L+KEM  +G SP +++YNTL++G C   R  EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + +  M+     PD++T++ LI G C  K++D  +K+     ++G   +   Y+IL+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +GK++ A +L+  M     +P+++TY  L+DGL   G  +KALEI+  + + ++   
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I+ Y   ++G+C   ++ DA+       C+G+ P  +T+ +++  +   G+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 241/462 (52%), Gaps = 20/462 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G+  N+   NI+I+ F +      A  +  + VM+    P+  T+N +INGLC  G+  +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGK-VMKLGYEPDTTTFNTLINGLCLEGKVSK 176

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            + + DRM +N  + D  TY S ++G+C++G+   A  + R+M E  +  D  TY+ +ID
Sbjct: 177 AVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIID 236

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             CR G I     L++ M  KG   +VV+YN L+RGL + GK ++   + + +  +    
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T  VL++   K                  EG+L +A  L   M   G   N  T N+
Sbjct: 297 NVITFNVLLDVFVK------------------EGKLQEANELYKEMITRGISPNIITYNT 338

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           LM+G+   ++L  A  +   M R  CSP +V++ +LI G C V+R  +     + + ++G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              + +TYS+L+ G CQS KI +A +L  + +  G  PDV  Y IL+ GLC  GK+E AL
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +++ +++K      +V Y T+++G+ K G  + A  ++  +  + ++P++++Y + + GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           C    +S+A   L      G  P   T++ L+RA + +G  T
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 250/474 (52%), Gaps = 20/474 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R +QF     F   L   G+  ++Y+   +IN   +      A +V  ++ + G E +
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI+G   +G   +A  + +R+V E    P++VTYN ++NG+C+ G      +M 
Sbjct: 158 TTTFNTLINGLCLEGKVSKAVVLVDRMV-ENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D FTY + I  LC+ G ++ A  +++EM   GI    VTYN+++ G C+A
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 290 GKIKE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  +    L +++ R+   NV+++N+L+   ++ GK+ EA  +++ +  +  + +  T+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L++G C                   + RL++A ++++ M ++ C  +  T  SL+ G+
Sbjct: 337 NTLMDGYCM------------------QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++++ + +F+ +S++G     V+Y+ L+ G C+  +   A    +EM+  G  PD+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY +L++GLC + K++ AL++     +      + MY  +I G+C  GKVEDA  L+ +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  +   PN++TY  ++ GL K G   +A  +   + E+   P+  +YN  ++ 
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 227/458 (49%), Gaps = 20/458 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A   L  + + G +PD  ++ T+INGL   G +  A+ + D M E G + ++V YN +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  + GD   A ++  ++  E +V  +V TY+ +I+ LC+ G  D  + ++  M+    +
Sbjct: 202 GICRSGDTSLAFDMLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
               TY S + GLCKAG       + ++MV   I  + +T+N ++D F + GK++E  EL
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           ++ M  +G   N+++YN L+ G     ++ EA ++ +L+    C+ D  T   LI G C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
              ++  +++   + + G                  G++  A  L   M  HG   +  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L++G     KLE A+ +F+++ +      +V Y T+I G+CK  +  +A++    + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG KP+++TY+++I+GLC+   +  A  L  +  + G  P+   YN LI      G + 
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            + +L   MK      +  +   ++D L  +G+ DK+ 
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKSF 597



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 214/426 (50%), Gaps = 21/426 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  KA   ++ + E G +PD+ +Y +++NG+ +SGD   A  +  +M ER V+ +
Sbjct: 168 LCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEM 228
           V  Y+ +ID   + G    A  +++   MET  +  +VVTYN ++ GLCK G++++   +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKE--METKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M   E   +  T+   +    K G ++ A  +Y+EM+  GI  + +TYN ++DG+C 
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++ E   + ++M R  C  ++V++  LI+G     +VD+ + ++  + ++   A++ T
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + +L+ G C++G +  A ++  E+   G                  G+L  A  +   + 
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           K    L      +++ G  +  K+E+A  LF  +  KG  P V++Y  +I+GLCK     
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA   +++M E G  P+  TY+ LI    +   +  + KL  +    GF+ D +   ++I
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585

Query: 511 HGLCSA 516
             L S 
Sbjct: 586 DMLLSG 591



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 38/292 (13%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING------LVKSGDLL---------- 152
           +  ++ + ++A      +  +G+ P++ +Y T+++G      L ++ ++L          
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 153 -------------------GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
                                + VF  + +RG+  N V Y+IL+ GF + G    A+E++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +V    V P+V+TY ++++GLC  G+ ++ LE+++ ++K++ +     Y + I G+CK
Sbjct: 427 QEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVS 312
            G VE A  ++  +   G+  + +TY  MI G C+ G + E   L   M   G   N  +
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           YN LIR  L +G +  +  + E ++    +AD+++  ++I+ L  +G L+K+
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 244/487 (50%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++   K      A+++   +  +G++ +++  NILI+ F   G       +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+ VT N +I GLC  G+  + L   D++     + +  +Y + I+G+C
Sbjct: 117 LAK-ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G+   A +  R++       D V YN +ID  C+   + E + L+  M  KG   +VV
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN LI G    GK+ EAI +   +  K  N +  T+ +L++ LCK              
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK-------------- 281

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A S++  M K   K +  T ++LM+G+    +++ A  +F  MS  G +P
Sbjct: 282 ----EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V +Y  LING CK +   EA +  KEM +K   P ++TYS LI+GLC+S +I     L 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y+ LI GLC  G ++ A+ L++ MK +   PN+ T+  L+DGL K 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A E++  +L +    ++ +YN+ + G C    + +A   L+     G +P   T+
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 612 HILVRAV 618
             ++ A+
Sbjct: 518 ETIIIAL 524



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 253/517 (48%), Gaps = 34/517 (6%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           +K LD F +M              + +  A    + L  KG++PD+ +   +IN     G
Sbjct: 63  NKILDSFAKM--------------KHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
            +    +V  ++ +RG   + V  N LI G   KG   +A    ++L+ +     N V+Y
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ-GFQLNQVSY 167

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             +ING+CK G     ++   ++     + D   Y + I  +CK   V  A  ++ EM  
Sbjct: 168 ATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAV 227

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            GI  D VTYN +I GFC  GK+KE   L   M  K    NV +YNIL+  L + GKV E
Sbjct: 228 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A S+  ++ +     D  T+  L++G            ++ EV++        A  + N 
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYF----------LVYEVKK--------AQHVFNA 329

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   + +T   L+NGF +   ++ A+ LFKEM +K   P +V+Y++LI+GLCK  R
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
               +  + EM ++G   D+ITYS LI+GLC++  +D A+ L  +   +   P++  + I
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+ GLC  G+++DA +++ ++  +    N+ TYN +++G  K G  ++AL + + + +  
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
             P+  ++   +  L        A + L   + RG+L
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 235/463 (50%), Gaps = 20/463 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A++ F+ M        ++ +N ++D F K   Y  A  +  RL ++  + P+++T N++I
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILI 101

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+      +  ++ K     D+ T  + I GLC  G V+ A   + +++  G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 274 VDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           ++ V+Y  +I+G C+ G  +   + L ++ GR    +VV YN +I  + +   V EA  +
Sbjct: 162 LNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL 221

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K  +AD  T+  LI G C  G L +AI +LNE+              +N     
Sbjct: 222 FSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM----------VLKTINP---- 267

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N YT N L++   +  K++ A  +   M +    P V++Y+TL++G   V    +A
Sbjct: 268 ----NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M   G  PD+ TY++LING C++K +D AL L  +  QK   P +  Y+ LI G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++     L   M+ R    +++TY++L+DGL K G  D+A+ ++N + ++ +RP+
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I ++ I L GLC   R+ DA E   D L +G      T+++++
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 240/500 (48%), Gaps = 43/500 (8%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVV---------HVSRILELIEI-----QKC 69
           + DS  +   Y+ +  L H +  + I P L+          H+ +I     +     ++ 
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 70  YCPEDVALSVI--------QAYGKNSMPDKALDVFQRMNEI-FGCEAGILCRKRQFEKAK 120
           Y P+ V L+ +        Q        DK L    ++N++ +      +C+      A 
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           +FL  +  +  KPDV  Y T+I+ + K   +  A  +F EM  +G+  +VV YN LI GF
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
              G    A  +   +V++T + PNV TYN++++ LCK G+  E   +   M K   + D
Sbjct: 245 CIVGKLKEAIGLLNEMVLKT-INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY + + G      V+ A+ V+  M   G+  D  TY  +I+GFC+   + E   L++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M +K  +  +V+Y+ LI GL ++G++     + + +R++   AD  T+  LI+GLCKNG
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNG 423

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           +L++AI                  +L N+M     + N +T   L++G  +  +L++A  
Sbjct: 424 HLDRAI------------------ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F+++  KG    V +YN +ING CK     EA + + +M + G  P+  T+  +I  L 
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525

Query: 480 QSKKIDMALKLCCQFLQKGF 499
           +  + D A KL  Q + +G 
Sbjct: 526 KKDENDKAEKLLRQMIARGL 545



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 106/202 (52%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M     +P ++ +N +++   K++ +  A S    +  KG +PD+IT ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C   +I     +  + L++G+ PD    N LI GLC  G+V+ AL  +  +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N V+Y TL++G+ K GD   A++    I     +PD++ YN  +  +C    +S+A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 594 EFLNDALCRGILPTTITWHILV 615
              ++   +GI    +T++ L+
Sbjct: 220 GLFSEMAVKGISADVVTYNTLI 241



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%)

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           ++   +A S    ML     P +I ++ +++   + K    A+ L  +   KG  PD+  
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            NILI+  C  G++     + + + KR   P+ VT NTL+ GL   G   KAL   + +L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +  + + +SY   + G+C       A +FL     R   P  + ++ ++ A+
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 52/104 (50%)

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S   V+DA+  ++ M      P ++ +N ++D   K      A+ + + +  + ++PD+I
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + NI +   C   +++  F  L   L RG  P T+T + L++ +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGL 139


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 182/678 (26%), Positives = 298/678 (43%), Gaps = 112/678 (16%)

Query: 27  SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE--IQKCYCPEDVALSVIQAYG 84
           S  R+ G+  S    + +LR L+D +   H  + L +    I     P+ VA      YG
Sbjct: 111 STMRKDGFVPSTRSVNRLLRTLVDSR---HFEKTLAVFADVIDSGTRPDAVA------YG 161

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           K                    +A ++ +    +K    + S+ + G+ P V++Y  V+ G
Sbjct: 162 K------------------AVQAAVMLK--DLDKGFELMKSMVKDGMGPSVFAYNLVLGG 201

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
           L K   +  A  +FDEM +R +  N V YN LIDG+ K G    A    ER+  E +V  
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERM-KEQNVEC 260

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKN----------------------------E 236
           N+VTYN ++NGLC  GR D+  E+   M+ +                            E
Sbjct: 261 NLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKE 320

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D  TYC  ++GLC+ G +E AE V  ++VE+G+    ++YN +++ +C+ G +K+  
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
              E M  +G   N +++N +I    E G+VD A +    + EK  +    T+  LING 
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440

Query: 356 CKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNA 398
            + G+  +  + L+E+++ G                 + +L DA  ++  M   G   NA
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              N L+      SKL++A   F EM + G   T+V+YNTLINGL +  R  +A     +
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKL---------------------CC----- 492
           M  KG  PD+ITY+ LI+G  +S      L+L                      C     
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620

Query: 493 --------QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                   + LQ    PD  +YN +I+     G V  A+ L+  M  +    + VTYN+L
Sbjct: 621 VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSL 680

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +    +     +   + + +  + L P + +YNI +KGLC     + A+ +  + + RG+
Sbjct: 681 ILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740

Query: 605 LPTTITWHILVRAVMNNG 622
           L      + L+  +   G
Sbjct: 741 LLNVSMCYQLISGLREEG 758



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 228/475 (48%), Gaps = 46/475 (9%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V+++   P+ V Y   +         D+  E+   M K+      F Y   + GLCK   
Sbjct: 148 VIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRR 207

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           ++ A +++ EM++  +  + VTYN +IDG+C+ G I+E     E M  +    N+V+YN 
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNS 267

Query: 316 LIRGLLENGKVDEAISIW----------------------------ELLREKNCNADSTT 347
           L+ GL  +G+VD+A  +                              L   K    D  T
Sbjct: 268 LLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERT 327

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + +L+NGLC+ G + KA ++L ++ E G                 EG +  A     +M+
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + N  T N++++ F +  ++++A    + M  KG SPTV +YN+LING  +   F 
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV 447

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
             + F+ EM + G KP++I+Y  LIN LC+ +K+  A  +    + +G +P+  +YN+LI
Sbjct: 448 RCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
              CS  K++DA + +  M +      LVTYNTL++GL + G   KA +++  +  +   
Sbjct: 508 EASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN 567

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           PD+I+YN  + G           E  +     GI PT  T+H L+ A    G  T
Sbjct: 568 PDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT 622



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 478 LCQ-SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           LC  SK +D A  L     + GF P     N L+  L  +   E  L +++++      P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + V Y   +       D DK  E+   ++++ + P + +YN+ L GLC   R+ DA +  
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 597 NDALCRGILPTTITWHILV 615
           ++ + R ++P T+T++ L+
Sbjct: 216 DEMIQRNMVPNTVTYNTLI 234



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI+   L++      N    L L+D   +  G   +   FH ++       +V       
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDK-MKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQ 628

Query: 62  ELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC--------- 111
           E++++     P+    + +I +Y ++    KA+ + Q+M      + G+ C         
Sbjct: 629 EMLQMD--LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM-----VDQGVDCDKVTYNSLI 681

Query: 112 ----RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
               R R+  + K  ++ +  KGL P V +Y  +I GL    D  GA   + EM ERG+ 
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLL 741

Query: 168 TNV-VCYNILIDGFFKKGDYMRAKEIWERL 196
            NV +CY  LI G  ++G    A+ +   L
Sbjct: 742 LNVSMCYQ-LISGLREEGMLREAQIVSSEL 770


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 266/530 (50%), Gaps = 19/530 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    + AK F   + + GL PD YSY  +I+GL  +G +  AL + ++M   G+E ++
Sbjct: 292 CKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDM 351

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YNIL  GF   G    A  I ++++++    PN+VTY V+I G C+ G  +E L+++ 
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGP-NPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M  +  +    +    +  LCK+  V+ A +++ EM  +G+  D +TY+ +I G C+ G
Sbjct: 411 EMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG 470

Query: 291 KIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++++   L+E M   +   N + +  ++ GL E GK+ +A   ++ L   N + D   + 
Sbjct: 471 EVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYN 530

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           ++I+G  K G   +A+++  ++ E G                   +L+ A  L++ +  H
Sbjct: 531 IMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLH 590

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G + NA T  +LMN + +   +++ + L  EM  K   PT ++Y  +I GLCK  +  E+
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES 650

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              +++M   G  PD ++Y+ +I   C+++ +  A +L  + L     P    YNILI+G
Sbjct: 651 CQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C  G ++DA  L  +++ R    N   Y T++      GD DKA+  +  ++E+     
Sbjct: 711 FCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVS 770

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I  Y+  +  LC    +++A  F    L  G+ P    + +L+ A    G
Sbjct: 771 IRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCG 820



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 237/484 (48%), Gaps = 20/484 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ +F+ A  F      K  +P V S+ T+++   K G +  A + F  M + G+  +
Sbjct: 256 LCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPD 315

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YNILI G    G    A ++   +     + P++VTYN++  G    G  +    + 
Sbjct: 316 AYSYNILIHGLCIAGSMGEALDLKNDM-ENHGLEPDMVTYNILAKGFRLLGLINGAWNII 374

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M       +  TY   I G C+ GNVE A ++Y+EM+  G  +  ++   ++   C++
Sbjct: 375 QKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKS 434

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++   F+L+  M   G   ++++Y+ LI GL + G+V +AI ++E +       +S  H
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIH 494

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           G ++ GLC+                  +G+++ A    + +      L+    N +++G+
Sbjct: 495 GAILMGLCE------------------KGKISQARMYFDYLITSNLSLDIILYNIMIDGY 536

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           I+      A+ L+K++  KG SPT+V++N+L+ G C   +  +A   +  +   G +P+ 
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ L+N  C+   +   L+L  +   K   P    Y ++I GLC   K++++ QL  +
Sbjct: 597 VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLED 656

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P+ V+YNT++    K  D  KA ++++ +L   L P  ++YNI + G C    
Sbjct: 657 MDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716

Query: 589 MSDA 592
           + DA
Sbjct: 717 LKDA 720



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 202/412 (49%), Gaps = 19/412 (4%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T +++++GLC+  RF + +  +   +  E +    ++ + +   CK G V+ A+  +  M
Sbjct: 248 TSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
           ++ G+  DA +YN +I G C AG + E  +L   M   G   ++V+YNIL +G    G +
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI 367

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           + A +I + +  K  N +  T+ VLI G C+ G + +A+++  E                
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE---------------- 411

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M  HG +L+  +   L+    ++ +++ A  LF EM   G  P +++Y+TLI+GLCK 
Sbjct: 412 --MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
               +A    ++M      P+ + +  ++ GLC+  KI  A       +    + D+ +Y
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           NI+I G    G   +A++LY  + ++   P +VT+N+LM G        +A  + + I  
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             L P+ ++Y   +   C    M    E L++   + I PT IT+ ++++ +
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 180/354 (50%), Gaps = 19/354 (5%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLL 321
           VY E+  SG      T + ++DG CR  + ++    ++   G++   +VVS+N ++    
Sbjct: 233 VYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYC 292

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G VD A S + ++ +     D+ ++ +LI+GLC                    G + +
Sbjct: 293 KLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCI------------------AGSMGE 334

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L N M+ HG + +  T N L  GF     +  A  + ++M  KG +P +V+Y  LI 
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C++    EA    KEM+  G++  +I+ ++L+  LC+S+++D+A KL C+    G  P
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D+  Y+ LIHGLC  G+V+ A+ LY  M     +PN + +  ++ GL + G   +A   +
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++++   L  DII YNI + G        +A +       +GI PT +T++ L+
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 197/428 (46%), Gaps = 55/428 (12%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM------ 161
           G LC+ RQ + A +    +   GL+PD+ +Y T+I+GL K G++  A+ ++++M      
Sbjct: 429 GSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRII 488

Query: 162 -------------------------FERGVETN----VVCYNILIDGFFKKGDYMRAKEI 192
                                    F+  + +N    ++ YNI+IDG+ K+G+   A ++
Sbjct: 489 PNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKL 548

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +++L  E  + P +VT+N ++ G C   +  +   + D +K +  E ++ TY + ++  C
Sbjct: 549 YKQL-GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           + GN++    +  EM    I    +TY  +I G C+  K++E  +L E M   G   + V
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SYN +I+   +   + +A  +++ +   N    S T+ +LING C               
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCV-------------- 713

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                G L DA +L+  +      LN Y   +++        ++ A+  F++M  KG   
Sbjct: 714 ----YGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEV 769

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           ++  Y+ +I  LCK     EA  F   ML  G  PD   + +L+N   Q   ++   +L 
Sbjct: 770 SIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829

Query: 492 CQFLQKGF 499
            + ++ G+
Sbjct: 830 AEMIKSGW 837



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 175/370 (47%), Gaps = 20/370 (5%)

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS 312
           ++  V  A  V  +M +    V   TYN+++     +  + + +   +V G     +  +
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQ--SEYT 248

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
            +I++ GL    +  +A+  ++    K       +   +++  CK G+++ A        
Sbjct: 249 SSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVA-------- 300

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                      S    M KHG   +AY+ N L++G   A  +  A+ L  +M   G  P 
Sbjct: 301 ----------KSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           +V+YN L  G   +     A++ +++ML KG  P+++TY++LI G CQ   ++ ALKL  
Sbjct: 351 MVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           + +  GF   +    +L+  LC + +V+ A +L+  M+     P+L+TY+TL+ GL K G
Sbjct: 411 EMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG 470

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           +  +A+ ++  +   R+ P+ + +   L GLC   ++S A  + +  +   +    I ++
Sbjct: 471 EVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYN 530

Query: 613 ILVRAVMNNG 622
           I++   +  G
Sbjct: 531 IMIDGYIKRG 540



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           + W    + + +L     +S  +  AL +  +     F   +  YN L++ L  +  + D
Sbjct: 173 RSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD 232

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
              +Y+ +K      +  T + ++DGL +      A+  +     +  +P ++S+N  + 
Sbjct: 233 ---VYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMS 289

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             C    +  A  F    L  G+LP   +++IL+  +   G+
Sbjct: 290 RYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGS 331


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 260/532 (48%), Gaps = 21/532 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  KA+  L  +    L P+  +Y T++N  VK G    AL + D+M + G+E +
Sbjct: 240 LCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEAD 298

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YNI+ID   K     RA  + +R+  E ++ P+  +YN +I+G    G+ +  + ++
Sbjct: 299 LYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGEGKINLAIYIF 357

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M +   +    TY + I G C+ G  + A RV  EM  +G+    +TY+A+++G+C+ 
Sbjct: 358 NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKH 417

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+    +L + +  R   +N   Y ILI G  + G+V +A  I + +     + D  T+
Sbjct: 418 SKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITY 477

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LING+CK G +++  +IL+ +++ G                  G   +A      + +
Sbjct: 478 SALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYR 537

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N+   N+L+  F +   +  A    + MSR   S  V S+N +I+  C+     E
Sbjct: 538 SGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLE 597

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+S    M+  GW PD+ TY  L+ GLCQ   +  A +     L+K    D    N L+ 
Sbjct: 598 AFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLV 657

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G+C  G +++AL L   M  RN +P+  TY  L+DG  K G    AL +   +LE+ L P
Sbjct: 658 GICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVP 717

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNNG 622
           D I+Y   L GL +  ++  A     + +C+ G+    I ++ ++   +  G
Sbjct: 718 DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 769



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 161/678 (23%), Positives = 308/678 (45%), Gaps = 94/678 (13%)

Query: 39   HLFHHILRRLIDPKLVVHVS---------------RILELIEIQKCYCPEDVALSVIQAY 83
            ++F+ +LR+ + P +  + +               R+L  ++I      E    +++  Y
Sbjct: 355  YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGY 414

Query: 84   GKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
             K+S    ALD+ + +          ++       C+  +  KAK+ L  +   G+ PDV
Sbjct: 415  CKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 136  YSYGTVINGLVKSG------DLLG-----------------------------ALAVFDE 160
             +Y  +ING+ K G      ++L                              AL  F +
Sbjct: 475  ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 161  MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            ++  G+  N V +N L+  F+++G    A++ +++ +    +  +V ++N +I+  C+ G
Sbjct: 535  IYRSGLVANSVIHNALLCSFYREGMIAEAEQ-FKQYMSRMKISFDVASFNCIIDSYCQRG 593

Query: 221  RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
               E   ++D M ++    D  TY S + GLC+ G++  A+     ++E    +D  T N
Sbjct: 594  NVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLN 653

Query: 281  AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
             ++ G C+ G + E  +L E M  +  L +  +Y IL+ G  + GKV  A+ + +++ EK
Sbjct: 654  TLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713

Query: 340  NCNADSTTHGVLINGLCKNGYLNKAIQILNEV--EEG----------------GEGRLAD 381
                D+  +  L+NGL   G +  A  +  E+  +EG                  G++ +
Sbjct: 714  GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773

Query: 382  AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
               L+  M ++    ++ + N LM+G+I+  +L   ++L+++M ++G  P  V+Y  LI 
Sbjct: 774  IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 833

Query: 442  GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK----------------ID 485
            GLC+      A  F+++M+ +G  PD + + +LI    +  K                ID
Sbjct: 834  GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDID 893

Query: 486  MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
             A +L       G  P     + ++ GLC  GKVE+A+ ++S++ +   VP + T+ TLM
Sbjct: 894  GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 953

Query: 546  DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
             GL K    D A  +   +    L+ D+++YN+ + GLC+   + DA +   +   +G+L
Sbjct: 954  HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 1013

Query: 606  PTTITWHILVRAVMNNGA 623
            P   T+  L  A+   G 
Sbjct: 1014 PNITTYITLTGAMYATGT 1031



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 234/488 (47%), Gaps = 37/488 (7%)

Query: 103  FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
            F C     C++    +A    +++   G  PD+ +YG+++ GL + G L+ A      + 
Sbjct: 582  FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 641

Query: 163  ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            E+    +    N L+ G  K G    A ++ E++V   ++ P+  TY ++++G CK G+ 
Sbjct: 642  EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR-NILPDTYTYTILLDGFCKRGKV 700

Query: 223  DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFVDAVTYNA 281
               L +   M +     D+  Y   ++GL   G V+ A  +++E++ + G++ D + YN+
Sbjct: 701  VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 760

Query: 282  MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            M++G+ + G+I E   L   M       +  SYNIL+ G ++ G++   + ++  + ++ 
Sbjct: 761  MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 820

Query: 341  CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
               D+ T+ +LI GLC+ G +  A++ L ++    EG   D  +                
Sbjct: 821  IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL--EGVFPDNLAF--------------- 863

Query: 401  CNSLMNGFIQASKLENAIFLF----------------KEMSRKGCSPTVVSYNTLINGLC 444
             + L+  F + SK+ NA+ LF                ++M   G  P+ V+ ++++ GLC
Sbjct: 864  -DILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 922

Query: 445  KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
            K  +  EA      ++  G  P + T++ L++GLC+  KID A  L       G   DV 
Sbjct: 923  KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 982

Query: 505  MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             YN+LI GLC+   + DAL LY  MK +  +PN+ TY TL   ++ TG      ++   I
Sbjct: 983  TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 1042

Query: 565  LEERLRPD 572
             +  + P 
Sbjct: 1043 EDRGIVPS 1050



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 256/549 (46%), Gaps = 51/549 (9%)

Query: 85  KNSMPDKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           +  MP +A+ V + +    F C A      R   +               +++S   ++N
Sbjct: 120 QAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCD-----------PTNLFSVDLLVN 168

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF--FKKGDYMRAKEIWERLVMETS 201
             VK G +L A A    M E G + ++   N +++      K +Y     +W  L ++ S
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEY-----VW--LFLKES 221

Query: 202 V---YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   +P +V T N+++N LC  G+  +   M  +MK N R  ++ TY + ++   K G  
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKKGRC 280

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV----SY 313
           + A R+  +M ++GI  D  TYN MID  C   K+K     + ++ R   +N+     SY
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLC---KLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G    GK++ AI I+  +  ++      T+  LI+G C+NG  ++A ++L E   
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE--- 394

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                          M   G + +  T ++L+NG+ + SKL  A+ L K +  +  S   
Sbjct: 395 ---------------MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINR 439

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             Y  LI+G C++    +A   +K ML  G  PD+ITYS LING+C+   I    ++  +
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 499

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G  P+  +Y  L+   C AG  ++AL+ + ++ +   V N V +N L+   ++ G 
Sbjct: 500 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 559

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A +   ++   ++  D+ S+N  +   C    + +AF   ++ +  G  P   T+  
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 619

Query: 614 LVRAVMNNG 622
           L+R +   G
Sbjct: 620 LLRGLCQGG 628



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 200/441 (45%), Gaps = 46/441 (10%)

Query: 218 KCGRFDEC-----LEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           K G+ D+      L M D + +++  ++ +  YC  +H L +A     A  V R +  +G
Sbjct: 79  KSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTG 138

Query: 272 IFVDAV-----------------TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
               A+                 + + +++ + + GK+ +       M   G   ++ S 
Sbjct: 139 FSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSC 198

Query: 314 NILIRGLLENGKVDEAISIWELLRE---KNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           N ++  L+    ++++  +W  L+E   +    D TT  +++N LC  G L+KA  +L +
Sbjct: 199 NNILNALV---GINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQK 255

Query: 371 VEE----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           ++                   +GR   A  +++ M+K+G + + YT N +++   +  + 
Sbjct: 256 MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A  L K M     +P   SYNTLI+G     +   A     +ML +  KP + TY+ L
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G C++ + D A ++  +    G  P    Y+ L++G C   K+  AL L   ++ R+ 
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSI 435

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             N   Y  L+DG  + G+  KA +I   +L + + PD+I+Y+  + G+C    + +  E
Sbjct: 436 SINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 495

Query: 595 FLNDALCRGILPTTITWHILV 615
            L+     G+LP  + +  LV
Sbjct: 496 ILSRMQKSGVLPNNVLYTTLV 516



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 24/222 (10%)

Query: 102  IFG-CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS------------ 148
            IFG CE G++      E A +FL  +  +G+ PD  ++  +I    +             
Sbjct: 832  IFGLCEYGLI------EIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSY 885

Query: 149  ----GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
                GD+ GA  + ++M   GV  + V  + ++ G  K G    A  ++   +M   + P
Sbjct: 886  MKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS-IMRAGMVP 944

Query: 205  NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
             + T+  +++GLCK  + D+   +   M+    + D  TY   I GLC    +  A  +Y
Sbjct: 945  TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLY 1004

Query: 265  REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
             EM   G+  +  TY  +       G +++  +L + +  +G
Sbjct: 1005 EEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 245/510 (48%), Gaps = 20/510 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CRK   +  +  L  + +   +PDVY+Y  +IN     G    AL     M + G   +
Sbjct: 159 FCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPS 218

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V +  +I+ F  +G+ M A+ +++ +  E    PNVV YN ++NG  K     +   ++
Sbjct: 219 LVTFGTVINAFCNQGNMMEARNLFDGM-KEAGHIPNVVCYNTLMNGYVKARDIGQANMLY 277

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D  T+   + G  + G  E  +R+ R++ +SG    +  YN  + G C A
Sbjct: 278 EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWA 337

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  +  E M  KG    VV++N +I      G  ++A   + ++ +      S T 
Sbjct: 338 GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTC 397

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI GL K                    RL +A  L+  M   G  +N      L++G+
Sbjct: 398 SSLIMGLSK------------------LWRLQEARDLLYEMIVEGLPINKAAFTLLLDGY 439

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A  L+ EM  +G  P  V+++  INGL  V    EAY    +M +KG+ P+ 
Sbjct: 440 FRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNN 499

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C S ++  AL L  +  +KG  PD+   NI+I+GLC  G+++ A  ++ N
Sbjct: 500 FVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRN 559

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M     +P++VTYNTL+DG  K  D     E+ N +      PDI +YNI L GLC+  +
Sbjct: 560 MHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRK 619

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           MS A   L + +  G++P T+T++ ++  V
Sbjct: 620 MSRAVMMLEELISAGVVPDTVTYNTVMNGV 649



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 258/533 (48%), Gaps = 37/533 (6%)

Query: 66  IQKCYCPEDVALS--VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQ 115
           +QK  C  DV     +I AY        AL   + M +         FG      C +  
Sbjct: 175 MQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGN 234

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
             +A+   + + E G  P+V  Y T++NG VK+ D+  A  +++EM  + V  +   +NI
Sbjct: 235 MMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNI 294

Query: 176 LIDGFFKKGDYMRAKEIWERLVME---TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           L+ G ++ G     +E  +RL+ +   +        YN+ ++GLC  G  DE ++  + M
Sbjct: 295 LVAGHYRYG----REEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDM 350

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +         + S I    +AG  E A + YR MV+ G+F  ++T +++I G  +  ++
Sbjct: 351 LEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRL 410

Query: 293 KECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E  + L+E++     +N  ++ +L+ G    G V  A S+W  +  +  + D+      
Sbjct: 411 QEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAF 470

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           INGL   G +++A  +  +                  M K G   N +  NSL+ GF  +
Sbjct: 471 INGLSIVGLVDEAYDVFLQ------------------MSKKGFMPNNFVYNSLIRGFCNS 512

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +L+ A+ L +EM+RKG  P + + N +INGLCK  R   A    + M   G  PD++TY
Sbjct: 513 GRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTY 572

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+G C++       ++  +    G+ PD+T YNI +HGLC+  K+  A+ +   +  
Sbjct: 573 NTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELIS 632

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
              VP+ VTYNT+M+G+  T   ++A+ +   +L+    P++++ N+ L   C
Sbjct: 633 AGVVPDTVTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFC 684



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 219/500 (43%), Gaps = 88/500 (17%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + Q   A  ++  + + G  P + ++GTVIN     G+++ A  +FD M E G   NV
Sbjct: 195 CTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNV 254

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI----------------- 213
           VCYN L++G+ K  D  +A  ++E +    +V P+  T+N+++                 
Sbjct: 255 VCYNTLMNGYVKARDIGQANMLYEEM-KSKAVAPDCTTFNILVAGHYRYGREEDRDRLLR 313

Query: 214 ------------------NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                             +GLC  G  DE ++  + M +         + S I    +AG
Sbjct: 314 DLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAG 373

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYN 314
             E A + YR MV+ G+F  ++T +++I G  +  +++E  +L +E++     +N  ++ 
Sbjct: 374 LEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFT 433

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +L+ G    G V  A S+W  +  +  + D+      INGL   G +++A  +  ++ + 
Sbjct: 434 LLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKK 493

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GRL +A  L   M + G   + +T N ++NG  +  ++++A
Sbjct: 494 GFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSA 553

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +F+ M   G  P +V+YNTLI+G CK          V +M   GW PD+ TY++ ++G
Sbjct: 554 SDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHG 613

Query: 478 LCQSKK----------------------------------IDMALKLCCQFLQKGFTPDV 503
           LC  +K                                  ++ A+ +  + L+  F P+V
Sbjct: 614 LCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNV 673

Query: 504 TMYNILIHGLCSAGKVEDAL 523
              N+L+   C  G  E  +
Sbjct: 674 VTANLLLSHFCKQGMPEKTI 693



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 35/277 (12%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  +V RM + G + ++     L    ++     +   L + M  +G  P   ++N +I
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVI 156

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            G C+        S +  M +   +PD+  Y++LIN  C   +   AL      +  G T
Sbjct: 157 LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCT 216

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P +  +  +I+  C+ G + +A  L+  MK+   +PN+V YNTLM+G  K  D  +A  +
Sbjct: 217 PSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANML 276

Query: 561 WNHILEERLRPDIIS-----------------------------------YNITLKGLCS 585
           +  +  + + PD  +                                   YNI + GLC 
Sbjct: 277 YEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCW 336

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              + +A +FL D L +GI PT + ++ ++ A    G
Sbjct: 337 AGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAG 373



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           ++LM GF++      A+ +   M   G  P+  +   L   L ++   G  +  ++ M+ 
Sbjct: 83  DTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIH 142

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G +P    ++ +I G C+   + +   L C   +    PDV  YNILI+  C+ G+  D
Sbjct: 143 QGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFD 202

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL     M    C P+LVT+ T+++     G+  +A  +++ + E    P+++ YN  + 
Sbjct: 203 ALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMN 262

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           G      +  A     +   + + P   T++ILV
Sbjct: 263 GYVKARDIGQANMLYEEMKSKAVAPDCTTFNILV 296


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 258/548 (47%), Gaps = 34/548 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + E+  + + + W  G  P V  Y  +I+G  + GD+   L +  EM  +G    
Sbjct: 214 LCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPT 273

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  LI+   KKGD  +   ++  +  +  + PNV  YN +I+ LCKC    + + + 
Sbjct: 274 LVTYGSLINCLGKKGDLEKIGSLFLEM-RKRGLSPNVQIYNSVIDALCKCWSATQAMVIL 332

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M  +  + D  T+ + I GLC  G+V  AE   RE +   +  + ++Y  +I GFC  
Sbjct: 333 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMR 392

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++    +L  E+MGR    +VV++  LI GL+  GKV EA+ + E + E+    D   +
Sbjct: 393 GELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIY 452

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            VLI+GLCK   L  A  IL E+ E                      L DA  +   M+ 
Sbjct: 453 NVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 512

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  +CN+++ G+ Q   +  AI     M + GC P   +Y T+I+G  K      
Sbjct: 513 KGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNG 572

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  ++ +M+++  KP+++TYS LING C++   D A  L      +  +P+V  Y ILI 
Sbjct: 573 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIG 632

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC---------------DK 556
            L    KV  A   +  M   +C PN VT + L++GL     C               D 
Sbjct: 633 SLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDA 692

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            L ++  ++ +   P   +YN  +  LC  + + +A +F N    +G +P  IT+  L+ 
Sbjct: 693 LLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLY 752

Query: 617 AVMNNGAS 624
              + G S
Sbjct: 753 GFCSVGKS 760



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 290/645 (44%), Gaps = 59/645 (9%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVH------ 56
           +S   L   + +  +P  A+AL         ++ SP   HH+   L DP  + H      
Sbjct: 59  LSDAHLAAAVSSLPDPDLAVALLS-------WSQSPD--HHV--ALQDPTPLAHSTLLRL 107

Query: 57  ---------VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA 107
                    V   L+ + +           +++ AY    M  KA D+ +R+ E +G   
Sbjct: 108 LARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLP 167

Query: 108 GI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
            +         L  +R+++ A++  + +  +    D YS   ++ GL   G +   L + 
Sbjct: 168 EVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLI 227

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLC 217
           +  +  G   +VV YN+LIDG+ ++GD  R   +     ME   + P +VTY  +IN L 
Sbjct: 228 EARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGE--MEAKGFLPTLVTYGSLINCLG 285

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           K G  ++   ++  M+K     +   Y S I  LCK  +   A  + ++M  SG   D +
Sbjct: 286 KKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDII 345

Query: 278 TYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           T+N +I G C  G +++    L E + R+   N +SY  LI G    G++  A  +   +
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
             +    D  T G LI+GL   G +++A+ +  ++ E       D              +
Sbjct: 406 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE--RQVFPD--------------V 449

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           N Y  N L++G  +   L  A  + +EM  K   P    Y TLI+G  + E  G+A    
Sbjct: 450 NIY--NVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCS 515
           + M  KG +PD+++ + +I G CQ   +  A+ LC   ++K G  PD   Y  +I G   
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI-LCMSNMRKVGCIPDEFTYTTVISGYAK 566

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G +  AL+   +M KR C PN+VTY++L++G  KTGD D A  ++ ++  E L P++++
Sbjct: 567 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 626

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           Y I +  L    ++  A  +    L     P  +T H LV  + +
Sbjct: 627 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS 671



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 214/459 (46%), Gaps = 19/459 (4%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G      C   L+  +   G   +A ++ ERL  +    P V   N ++  L +  R+D+
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             +++D M   +   D+++ C  + GLC  G VE   ++      +G     V YN +ID
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+CR G +     L   M  KG L  +V+Y  LI  L + G +++  S++  +R++  + 
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +   +  +I+ LCK     +A+ IL +                  M   GC  +  T N+
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQ------------------MFASGCDPDIITFNT 349

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ G      +  A    +E  R+  +P  +SY  LI+G C       A   + EM+ +G
Sbjct: 350 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRG 409

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD++T+  LI+GL  + K+  AL +  +  ++   PDV +YN+LI GLC    +  A 
Sbjct: 410 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAK 469

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            +   M ++N  P+   Y TL+DG  ++ +   A +I+  +  + +RPDI+S N  +KG 
Sbjct: 470 NILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGY 529

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C    MS+A   +++    G +P   T+  ++      G
Sbjct: 530 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 218/519 (42%), Gaps = 87/519 (16%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I   GK    +K   +F  M         +I+      LC+     +A   L  ++  
Sbjct: 279 SLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFAS 338

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD+ ++ T+I GL   G +  A     E   R +  N + Y  LI GF  +G+ M A
Sbjct: 339 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAA 398

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++   + M     P+VVT+  +I+GL   G+  E L + ++M + +   D   Y   I 
Sbjct: 399 SDLLMEM-MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLCK   +  A+ +  EM+E  +  D   Y  +IDGF R+  + +  +++E M  KG   
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++VS N +I+G  + G + EAI     +R+  C  D  T+  +I+G  K G LN A++ L
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M K  CK N  T +SL+NG+ +    ++A  LF  M  + 
Sbjct: 578 CD------------------MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL---------- 478
            SP VV+Y  LI  L K ++   A  + + ML     P+ +T   L+NGL          
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINS 679

Query: 479 ----------------------------------------CQSKKIDMALKLCCQFLQKG 498
                                                   C+   +  AL    +  +KG
Sbjct: 680 ICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKG 739

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           + P+   +  L++G CS GK         +M  R  +PN
Sbjct: 740 YVPNPITFLSLLYGFCSVGK---------SMNWRTILPN 769


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 259/543 (47%), Gaps = 55/543 (10%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+ PDV+++ T IN   K G +  A+ +F +M   GV  NVV YN +IDG FK G +  
Sbjct: 249 QGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEE 308

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A    +R+V  + V P+VVTY V+I+GL K   F+E  E+   M       +   + + I
Sbjct: 309 ALRFKDRMV-RSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALI 367

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC------------- 295
            G C+ G++  A RV  EM   G+  + VT+N ++ GFCR+ ++++              
Sbjct: 368 DGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLS 427

Query: 296 -------FELWEVMGRKGCLN-------VVSYNI---------LIRGLLENGKVDEAISI 332
                  + +  +M R G ++       ++S NI         L+ GL +     EAI +
Sbjct: 428 VNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIEL 487

Query: 333 W-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--------------- 376
           W +L   K   A++ T   L++GLC+ G + +  ++L ++ E G                
Sbjct: 488 WFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCC 547

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             G++ +A  L   M +   + + YT N LM G     K+++   L  E    G  P V 
Sbjct: 548 KWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVY 607

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  L+ G CK +R  +A  F K +  +  +   + Y++LI   C+   +  A KL    
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
             +G  P    Y+ LIHG+C  G+V++A +++  M+    +PN+  Y  L+ G  K G  
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM 727

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D    I   +    +RP+ I+Y I + G C    M +A E LN+ +  GI P T+T++ L
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787

Query: 615 VRA 617
            + 
Sbjct: 788 QKG 790



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 252/493 (51%), Gaps = 22/493 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           ++G+ P + +   +++ LVK+ +L  +  VFD +  +GV  +V  +   I+ F K G   
Sbjct: 214 KRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVG 272

Query: 188 RAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            A +++ +  ME   V+PNVVTYN +I+GL K GRF+E L   DRM +++      TY  
Sbjct: 273 DAVDLFCK--MEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGV 330

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GL K    E A  V  EM   G   + V +NA+IDG+CR G + E   + + M  KG
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N V++N L++G   + ++++A  +   +     + +      +I+ L +      A+
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           +I+ ++  G   R++D  SL+  +    CK   ++              E     FK  +
Sbjct: 451 KIVTKLLSGNI-RVSD--SLLTPLVVGLCKCEGHS--------------EAIELWFKLAA 493

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG +   V+ N L++GLC+     E +  +K+MLEKG   D I+Y+ LI G C+  KI+
Sbjct: 494 VKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIE 553

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A KL  + +Q+ F PD   YN L+ GL   GK++D  +L    K+   VPN+ TY  L+
Sbjct: 554 EAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLL 613

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +G  K    + A++ + ++  E++    + YNI +   C    +++AF+  +    RGIL
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGIL 673

Query: 606 PTTITWHILVRAV 618
           PT  T+  L+  +
Sbjct: 674 PTCATYSSLIHGM 686



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 272/593 (45%), Gaps = 68/593 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           + I A+ K      A+D+F +M E  G    +         L +  +FE+A RF + +  
Sbjct: 260 TAINAFCKGGRVGDAVDLFCKM-EGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVR 318

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
             + P V +YG +I+GL+K      A  V  EM+  G   N V +N LIDG+ +KGD   
Sbjct: 319 SKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGE 378

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF-------------------DECLEMW 229
           A  + + + M+  + PN VT+N ++ G C+  +                    D C  + 
Sbjct: 379 ALRVRDEMAMK-GMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVI 437

Query: 230 DRMKK-----------------NEREKDSFTYCSFIHGLCK-AGNVEGAERVYREMVESG 271
            R+ +                 N R  DS      + GLCK  G+ E  E  ++     G
Sbjct: 438 HRLMERSGFVSALKIVTKLLSGNIRVSDSL-LTPLVVGLCKCEGHSEAIELWFKLAAVKG 496

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
           +  + VT NA++ G C  G ++E FE+ + M  KG L + +SYN LI G  + GK++EA 
Sbjct: 497 LAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAF 556

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + E + ++    D+ T+  L+ GL   G ++   ++L+E +E                 
Sbjct: 557 KLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKE----------------- 599

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            +G   N YT   L+ G+ +A ++E+A+  FK +  +    + V YN LI   C++    
Sbjct: 600 -YGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVT 658

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA+     M  +G  P   TYS LI+G+C   ++D A ++  +   +G  P+V  Y  LI
Sbjct: 659 EAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALI 718

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C  G+++    +   M      PN +TY  ++DG  K G+  +A E+ N ++   + 
Sbjct: 719 GGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIA 778

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           PD ++YN   KG C    ++   +  + +     L   IT++ L+  +  + A
Sbjct: 779 PDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKLHPHTA 831



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 209/443 (47%), Gaps = 20/443 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V+P + T N++++ L K     +  E++D +       D FT+ + I+  CK G V  A 
Sbjct: 217 VFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAV 275

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGL 320
            ++ +M   G+F + VTYN +IDG  ++G+ +E     + M R K   +VV+Y +LI GL
Sbjct: 276 DLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGL 335

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           ++    +EA  +   +       +      LI+G C+ G + +A+++ +E+   G     
Sbjct: 336 MKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNF 395

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         ++  A  ++  +   G  +N   C+ +++  ++ S   +A+ +  +
Sbjct: 396 VTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTK 455

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYS-FVKEMLEKGWKPDMITYSLLINGLCQSK 482
           +       +      L+ GLCK E   EA   + K    KG   + +T + L++GLC+  
Sbjct: 456 LLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERG 515

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            ++   ++  Q L+KG   D   YN LI G C  GK+E+A +L   M ++   P+  TYN
Sbjct: 516 NMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYN 575

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            LM GL   G  D    + +   E    P++ +Y + L+G C   R+ DA +F  +    
Sbjct: 576 FLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYE 635

Query: 603 GILPTTITWHILVRAVMNNGAST 625
            +  +++ ++IL+ A    G  T
Sbjct: 636 KVELSSVVYNILIAAYCRIGNVT 658


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/627 (25%), Positives = 283/627 (45%), Gaps = 86/627 (13%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           +PG   S       +RRL     V  V   L+ + ++   C ED  ++ I A+ +    D
Sbjct: 44  DPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSAD 103

Query: 91  KALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
           +AL  F R +++ GC                           P V  Y  +++ L++   
Sbjct: 104 RALKTFYRASDL-GCR-------------------------DPGVRVYNHLLDALLRENM 137

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           +   + V+D M + GV+ NV  YN+LI    +      A+++ + +      +P+ V++ 
Sbjct: 138 VGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS-RKGCHPDEVSHG 196

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +++G+CK GR +E      R    E      +Y + +H LC    +     V  EMV+ 
Sbjct: 197 TIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQR 251

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G+  + VTY  ++D FC+A +++    +   M   GC  NV+++  L++G  E+GKV +A
Sbjct: 252 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 311

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           +S+W  + ++     + ++ VLI GLC  G L  A+   N                   M
Sbjct: 312 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS------------------M 353

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            ++    NA T ++L++GF  A  L+ A+ ++ EM   GC P VV Y  +I+ LCK   F
Sbjct: 354 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 413

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A S + +ML     P+ +T++ LI  LC   ++  AL +     + G  P+   YN L
Sbjct: 414 DQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNEL 473

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +HGL   G  +DA  +   M       +LVTYNT+++ L +      A+ +   ++ + +
Sbjct: 474 LHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGI 533

Query: 570 RPD-----------------------------------IISYNITLKGLCSCSRMSDAFE 594
           +PD                                   +++Y I +  LC+  ++S+A  
Sbjct: 534 QPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMV 593

Query: 595 FLNDALCRGILPTTITWHILVRAVMNN 621
           +L   L  GI P   TW++LVRA+  N
Sbjct: 594 YLLKMLYEGICPNEATWNVLVRAIFTN 620



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 192/389 (49%), Gaps = 14/389 (3%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           I    +AG+ + A + +    + G     V  YN ++D   R   +     +++ M + G
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV +YN+LIR L +N +VD A  + + +  K C+ D  +HG +++G+CK G + +A 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 366 QILNE---VEEG---------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
             L E   V+           GE R+ +  S+VN M + G + N  T  ++++ F +A +
Sbjct: 213 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 272

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L  A  +   M   GC+P V+++  L+ G  +  +  +A S    M+++GW P  I+Y++
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 332

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI GLC    +  AL       +    P+ T Y+ L+ G  +AG ++ A+ +++ MK   
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN+V Y  ++D L K    D+A  + + +L +   P+ +++N  +  LC C R+  A 
Sbjct: 393 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 452

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
              +     G  P   T++ L+  +   G
Sbjct: 453 NVFHGMRRNGCHPNDRTYNELLHGLFREG 481


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 239/464 (51%), Gaps = 20/464 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR +Q + A  FL  L ++G   + Y +  VI+G    G +  A+ VFD M + G   +
Sbjct: 258 LCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPD 317

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y+IL+DG  K+GD +    +   +     + PN+V+Y+ +++GLC+ GR +   E++
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMA-RNGITPNLVSYSSLLHGLCRAGRVELAFELF 376

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            R+K    + D   Y   +HG C+  ++E    ++ +MV      DA  Y+++I  +CR 
Sbjct: 377 KRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRH 436

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++KE  E++E+M   G C NVV+  IL+ G    G + EA    + +R+     +  T+
Sbjct: 437 RQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTY 496

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            V+INGLCK   +NK     N+V     G  AD       M K G   +    + +++GF
Sbjct: 497 RVIINGLCK---VNKP----NDVW----GIFAD-------MIKRGYVPDTVLYSIIIDGF 538

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A  L+ A  L+ +M  +G  P + +Y +LINGLC  ++  E  +  K M+ +G  PD 
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDR 598

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I Y+ LI   C+   +  AL++  +   +G + D  +Y  LI G      ++ A      
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEE 658

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           M  +   P +VTY  L+ G FK GD  KA+ ++N +L+  + PD
Sbjct: 659 MMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 234/492 (47%), Gaps = 20/492 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            E+A+  L+ +  +G++P+  +YGT + GL ++  +  A      + +RG   N  C+N 
Sbjct: 229 LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNA 288

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +I GF   G   +A E+++ +  +    P+V +Y+++++GLCK G       M   M +N
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGM-KKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARN 347

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               +  +Y S +HGLC+AG VE A  +++ + + G   D + Y+ ++ G C+   ++ C
Sbjct: 348 GITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEIC 407

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           ++LW  M     + +  +Y+ LI     + ++ EA+ ++EL+       +  T  +L++G
Sbjct: 408 YDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHG 467

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
               G + +A   L++V +                   G   N  T   ++NG  + +K 
Sbjct: 468 FSNEGLIGEAFLFLDKVRQ------------------FGVVPNLCTYRVIINGLCKVNKP 509

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
            +   +F +M ++G  P  V Y+ +I+G  K     EA+    +M+++G KP++ TY+ L
Sbjct: 510 NDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           INGLC   K+   + L    + +G TPD  +Y  LI   C    ++ AL+++  M+    
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGL 629

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             +   Y  L+ G  K    D A      ++ + L P +++Y   + G         A  
Sbjct: 630 SADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMV 689

Query: 595 FLNDALCRGILP 606
             N  L  GI P
Sbjct: 690 MYNSMLQAGIAP 701



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 257/553 (46%), Gaps = 34/553 (6%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------LCRKRQFEKAKRFLNSLW 127
           V  +VI+ + + SM + AL  +    ++ G E  +       L    Q    +   + + 
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKV-GVELQVCNFLLKGLVEGNQIMYVRSLFDDMK 203

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLL--GALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
             G  P++YSY  +++       L    A  +  EM   GV  N   Y   + G  +   
Sbjct: 204 ISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK- 262

Query: 186 YMRAKEIWERLVMETSV-YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
             + K  W  L M     YP N   +N +I+G C  G+  + +E++D MKK     D  +
Sbjct: 263 --QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHS 320

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   + GLCK G+V     +  EM  +GI  + V+Y++++ G CRAG+++  FEL++ + 
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +G   + + Y+I++ G  ++  ++    +W  +   N   D+  +  LI   C++  L 
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A+++        E  + D           G   N  TC  L++GF     +  A     
Sbjct: 441 EALEVF-------ELMICD-----------GICPNVVTCTILVHGFSNEGLIGEAFLFLD 482

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           ++ + G  P + +Y  +INGLCKV +  + +    +M+++G+ PD + YS++I+G  ++ 
Sbjct: 483 KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +  A +L  + + +G  P++  Y  LI+GLC   K+ + + L+ +M      P+ + Y 
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYT 602

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L+    K  +   ALEI+  +  E L  D   Y   + G      M  A  F+ + + +
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662

Query: 603 GILPTTITWHILV 615
           G+ PT +T+  L+
Sbjct: 663 GLTPTVVTYTDLI 675



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 226/509 (44%), Gaps = 61/509 (11%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F+ A    ++L      P VY+  TVI   V+      AL  + E  + GVE  V   N 
Sbjct: 126 FQLAPMLASNLGGSMTLPQVYA--TVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NF 181

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+ G  +    M  + +++ + + +   PN+ +Y+V+++                     
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKI-SGPSPNIYSYSVLMS--------------------- 219

Query: 236 EREKDSFTYCSFIHG--LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                      + HG  LC    +E A+ +  EM   G+  +A TY   + G CRA ++K
Sbjct: 220 ----------MYTHGAKLC----LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVK 265

Query: 294 ECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             +   +++ ++G   N   +N +I G   +G+V +A+ +++ +++     D  ++ +L+
Sbjct: 266 SAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILV 325

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLCK G +     +L E                  M ++G   N  + +SL++G  +A 
Sbjct: 326 DGLCKQGDVLTGYYMLVE------------------MARNGITPNLVSYSSLLHGLCRAG 367

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           ++E A  LFK +  +G     + Y+ +++G C+       Y    +M+   + PD   YS
Sbjct: 368 RVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYS 427

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI   C+ +++  AL++    +  G  P+V    IL+HG  + G + +A      +++ 
Sbjct: 428 SLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQF 487

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             VPNL TY  +++GL K    +    I+  +++    PD + Y+I + G      + +A
Sbjct: 488 GVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEA 547

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNN 621
           F      +  G  P   T+  L+  + ++
Sbjct: 548 FRLYYKMVDEGTKPNIFTYTSLINGLCHD 576



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L++GL+E  ++    S+++ ++    + +  ++ VL++      Y + A   L E +E
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSM-----YTHGAKLCLEEAQE 234

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                      L++ M+  G + NA T  + + G  +A ++++A    + + ++G     
Sbjct: 235 -----------LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNS 283

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             +N +I+G C   +  +A      M + G+ PD+ +YS+L++GLC+   +     +  +
Sbjct: 284 YCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVE 343

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G TP++  Y+ L+HGLC AG+VE A +L+  +K +    + + Y+ ++ G  +  D
Sbjct: 344 MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +   ++WN ++     PD  +Y+  +   C   ++ +A E     +C GI P  +T  I
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTI 463

Query: 614 LVRAVMNNG 622
           LV    N G
Sbjct: 464 LVHGFSNEG 472


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 252/514 (49%), Gaps = 26/514 (5%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+  +Y  +I  L + G L  + A F  + + G   N +  N L+ G         A 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK----DSFTYCS 246
           ++  + + E    P+ V+Y++++ G C   R +E LE+  RM  N+  +    +  TY +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELL-RMMANDHGRSCPPNVVTYTT 212

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCKA   + AE V+++M+++G+  +  TYN +I G+   GK KE  ++ E M  +G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +  +Y  L+  L     + E  S  +L+ E   + D     +  +   K G ++KA+
Sbjct: 273 LKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329

Query: 366 QILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            I N++ + G                  GR+ DA    N+M   G   N    NSL+ G 
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               K E A  L  EM  +G  P  V +NTLI  LC V R  E    +  M   G +PD 
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +Y+ LI+G C + + D A K+    +  G +P    YN L+HG CSA +++DA  L+  
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M ++   P +VTYNT++ GLF+T    +A E++ +++    + DI +YNI L GLC  + 
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 569

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +AF+       +G+    IT+ I++ A++  G
Sbjct: 570 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 267/552 (48%), Gaps = 64/552 (11%)

Query: 91  KALDVF-QRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE---KGLKPDVYS 137
           +A+DV  QRM E+ GC    +         C + + E+A   L  +     +   P+V +
Sbjct: 151 EAMDVLLQRMPEL-GCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT 209

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER-- 195
           Y TVI+GL K+     A  VF +M + GV+ N   YN LI G+   G +    ++ E+  
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269

Query: 196 -----------------------------LVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
                                        L++E  + P+   +N+  +   KCG  D+ +
Sbjct: 270 ARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++++M+++    +   Y + I  LCK G V+ AE  + +M+  G+  + V +N+++ G 
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389

Query: 287 CRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C   K +   EL +E++ +  C N V +N LI  L   G+V E   + +L+       D+
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            ++  LI+G C                    GR  +A  + + M   G      T N+L+
Sbjct: 450 FSYTPLISGYCL------------------AGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G+  AS++++A  LF+EM RKG +P VV+YNT+++GL + +RF EA      M+  G K
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 551

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D+ TY++++NGLC+S  +D A K+      KG   ++  + I+I  L   G+ EDA+ L
Sbjct: 552 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 611

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           ++ +     VPN+VTY  + + L + G  ++   +++ + +    P+    N  ++ L  
Sbjct: 612 FAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 671

Query: 586 CSRMSDAFEFLN 597
              +S A  +L+
Sbjct: 672 RGDISRAGAYLS 683



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 263/532 (49%), Gaps = 27/532 (5%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE---RGVETN 169
           KR  E     L  + E G  PD  SY  ++ G         AL +   M     R    N
Sbjct: 147 KRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPN 206

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  +IDG  K   + RA+ ++++++ +  V PN  TYN +I+G    G++ E ++M 
Sbjct: 207 VVTYTTVIDGLCKAQLFDRAEGVFQQMI-DNGVKPNNDTYNCLIHGYLSIGKWKEVVQML 265

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M     + D +TY S ++ LC    +     +   MVE+G+  D   +N     + + 
Sbjct: 266 EKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKC 322

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I +  +++  M + G   NVV+Y  LI  L + G+VD+A   +  +  +    +    
Sbjct: 323 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 382

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L+ GLC      +A +++ E+ + G                  GR+ +   L++ M+ 
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 442

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +A++   L++G+  A + + A  +F  M   G SPT V+YNTL++G C   R  +
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 502

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           AY   +EML KG  P ++TY+ +++GL Q+K+   A +L    +  G   D+  YNI+++
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 562

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC +  V++A +++ ++  +    N++T+  ++  L K G  + A++++  I    L P
Sbjct: 563 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNNG 622
           ++++Y +  + L     + + F+ L  A+ + G  P +   + LVR +++ G
Sbjct: 623 NVVTYRLVAENLIEEGSLEE-FDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 32/491 (6%)

Query: 71  CPEDVAL--SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAK 120
           CP +V    +VI    K  + D+A  VFQ+M        N+ + C         ++++  
Sbjct: 203 CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVV 262

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + L  +  +GLKPD Y+YG+++N L    ++   L   D M E G+  +   +NI    +
Sbjct: 263 QMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFL---DLMVENGLSPDHHIFNIFFSAY 319

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K G   +A +I+ ++  +  + PNVV Y  +I+ LCK GR D+    +++M       +
Sbjct: 320 AKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 378

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
              + S ++GLC     E AE +  EM++ GI  +AV +N +I   C  G++ E   L +
Sbjct: 379 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 438

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M   G   +  SY  LI G    G+ DEA  +++ +     +    T+  L++G C   
Sbjct: 439 LMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 498

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            ++ A  +  E+   G                   R ++A  L   M   G K + YT N
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            ++NG  +++ ++ A  +F+ +  KG    ++++  +I  L K  R  +A      +   
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 618

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P+++TY L+   L +   ++    L     + G  P+  M N L+  L   G +  A
Sbjct: 619 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678

Query: 523 LQLYSNMKKRN 533
               S + +RN
Sbjct: 679 GAYLSKLDERN 689



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 198/431 (45%), Gaps = 47/431 (10%)

Query: 81  QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            AY K  M DKA+D+F +M +                            GL P+V +YG 
Sbjct: 317 SAYAKCGMIDKAMDIFNKMRQ---------------------------HGLSPNVVNYGA 349

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+ L K G +  A   F++M   GV  N+V +N L+ G      + RA+E+   + ++ 
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM-LDQ 408

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + PN V +N +I  LC  GR  E   + D M+      D+F+Y   I G C AG  + A
Sbjct: 409 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           E+V+  MV  G+    VTYN ++ G+C A +I + + L+  M RKG    VV+YN ++ G
Sbjct: 469 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 528

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L +  +  EA  ++  +       D  T+ +++NGLCK+  +++A ++            
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ---------- 578

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
               SL ++    G +LN  T   ++   ++  + E+A+ LF  +   G  P VV+Y  +
Sbjct: 579 ----SLCSK----GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 630

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
              L +     E  S    M + G  P+    + L+  L     I  A     +  ++ F
Sbjct: 631 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 690

Query: 500 TPDVTMYNILI 510
           + + +  ++LI
Sbjct: 691 SVEASTTSLLI 701



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 2/255 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A++  + +   GL P   +Y T+++G   +  +  A  +F EM  +GV   V
Sbjct: 460 CLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 519

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G F+   +  AKE++  ++  +    ++ TYN+++NGLCK    DE  +M+ 
Sbjct: 520 VTYNTILHGLFQTKRFSEAKELYLNMI-NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 578

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +     + +  T+   I  L K G  E A  ++  +  +G+  + VTY  + +     G
Sbjct: 579 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 638

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E   L+  M + G   N    N L+R LL  G +  A +    L E+N + +++T  
Sbjct: 639 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 698

Query: 350 VLINGLCKNGYLNKA 364
           +LI+    + Y + A
Sbjct: 699 LLISIFTSDEYQHHA 713



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 112/206 (54%), Gaps = 9/206 (4%)

Query: 418 IFLFKEMSRKGCS----PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           + LF  M R+ CS    P   +Y+ LI  LC++ R   +++    +L+ GW+ + I  + 
Sbjct: 80  VSLFNRMVRE-CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138

Query: 474 LINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLY---SNM 529
           L+ GLC  K++  A+ +  Q + + G TPD   Y+IL+ G C+  + E+AL+L    +N 
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             R+C PN+VTY T++DGL K    D+A  ++  +++  ++P+  +YN  + G  S  + 
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +  + L     RG+ P   T+  L+
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLL 284



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P +V   +++  Y   S  D A  +F+ M    G   G+         L + ++F +AK 
Sbjct: 482 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKRFSEAKE 540

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
              ++   G K D+Y+Y  ++NGL KS  +  A  +F  +  +G++ N++ + I+I    
Sbjct: 541 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G    A +++   +    + PNVVTY ++   L + G  +E   ++  M+KN    +S
Sbjct: 601 KGGRKEDAMDLFAA-IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 659

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
               + +  L   G++  A     ++ E    V+A T + +I  F
Sbjct: 660 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 232/447 (51%), Gaps = 20/447 (4%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++ + G E + +     I GF  KG   +A    ++ V+    + + V+Y  +INGLCK 
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDK-VIAMGFHLDQVSYGTLINGLCKV 311

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G     LE+  R      + D   Y + I G+CK  +V  A  +Y E V   IF D  TY
Sbjct: 312 GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           NA+I GFC  GK+K+  +L+  M  K  + +V +++IL+ G  ++G + EA ++  ++ +
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           ++   D  T+  L++G C          ++NEV +        A S+ N M   G   N 
Sbjct: 432 QSIKPDVVTYSSLMDGYC----------LVNEVNK--------AESIFNTMSHRGVTANV 473

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            + N ++NGF +   ++ A+ LFKEM  K   P V++Y++LI+GLCK  R   A   V E
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M  +G +PD+ITY+ +++ LC+   +D A+ L  +   +G  PD+  Y IL+ GLC +GK
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +EDA +++ ++  +    ++  Y  ++ G    G  D+AL + + + E    PD  +Y I
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGIL 605
            +  L        A + L + + RG+L
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 215/424 (50%), Gaps = 19/424 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +++    P+ +T    I G C  G+  + L   D++       D  +Y + I+GLCK G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNI 315
            + A  + R      +  D V YN +IDG C+   + + F+L+ E + ++   +V +YN 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G    GK+ +AI ++  +  KN   D  T  +L++G CK                  
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK------------------ 415

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           +G + +A +++  M K   K +  T +SLM+G+   +++  A  +F  MS +G +  V S
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +ING CK++   EA    KEM  K   PD+ITYS LI+GLC+S +I  AL+L  +  
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH 535

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +G  PD+  YN ++  LC    V+ A+ L + +K +   P++ TY  L+ GL ++G  +
Sbjct: 536 YRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLE 595

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A +++  +L +    D+ +Y + ++G C      +A   L+     G +P   T+ I++
Sbjct: 596 DARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655

Query: 616 RAVM 619
            ++ 
Sbjct: 656 LSLF 659



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 256/549 (46%), Gaps = 67/549 (12%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F   L +    PD+  +G ++  LVKS      L++  +M  +G++ N +  NILI+ F 
Sbjct: 98  FYRLLRQNPTPPDI-EFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFC 156

Query: 182 KKG-----------------------------DYMRA----------KEIWERLVMETSV 202
           + G                             D+ R           K ++ +  +++ +
Sbjct: 157 QLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRL 216

Query: 203 YPNVVTYNVMI-------NGLCKCGRFDECLEMWD-RMKKNEREKDSFTYCSFIHGLCKA 254
           +  + ++ ++I          C    F+  +E    ++ KN  E D+ T  +FI G C  
Sbjct: 217 FNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLK 276

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSY 313
           G +  A   + +++  G  +D V+Y  +I+G C+ G+ K   EL     G+    +VV Y
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMY 336

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I G+ ++  V++A  ++     K    D  T+  LI+G C                 
Sbjct: 337 NTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI---------------- 380

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G+L DA  L N+M       + YT + L++GF +   ++ A  +   M ++   P V
Sbjct: 381 --VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y++L++G C V    +A S    M  +G   ++ +Y+++ING C+ K +D A+KL  +
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              K   PDV  Y+ LI GLC +G++  AL+L   M  R   P+++TYN+++D L K   
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            DKA+ +   +  + +RPD+ +Y I +KGLC   ++ DA +   D L +G       + +
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 614 LVRAVMNNG 622
           +++   + G
Sbjct: 619 MIQGFCDKG 627



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 215/413 (52%), Gaps = 19/413 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C K Q  +A  F + +   G   D  SYGT+INGL K G+   AL +      + V+ +
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD 332

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN +IDG  K      A +++   V    ++P+V TYN +I+G C  G+  + ++++
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKV-SKRIFPDVFTYNALISGFCIVGKLKDAIDLF 391

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M       D +T+   + G CK GN++ A+ V   M++  I  D VTY++++DG+C  
Sbjct: 392 NKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLV 451

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   ++  M  +G   NV SYNI+I G  +   VDEA+ +++ +  K    D  T+
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 511

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRMDK 391
             LI+GLCK+G ++ A+++++E+   G+                   +  A +L+ ++  
Sbjct: 512 SSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG 571

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + +  T   L+ G  Q+ KLE+A  +F+++  KG +  V +Y  +I G C    F E
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           A + + +M E G  PD  TY ++I  L +  + DMA KL  + + +G    +T
Sbjct: 632 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 179/619 (28%), Positives = 294/619 (47%), Gaps = 37/619 (5%)

Query: 2   VISAKRLLNLLKAEKN-PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           V   + LL +L + K+ P TAL  F    ++P +  S   F  IL  L     +     +
Sbjct: 48  VTQPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWV 107

Query: 61  LE-LIEIQKCYCPEDVALSVIQAYGKNS-MPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
           +E  IE++      DV + +    G+NS +  K LD+  +          +  +K   EK
Sbjct: 108 MEKAIEVKVDGGVLDVLVGI--GCGRNSEVSVKLLDLLIQ----------VFAKKLILEK 155

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA-VFDEMFERGVETNVVCYNILI 177
                  +   GL PDV +   V+  L+K   ++  +  V+  M +  +   +V +N ++
Sbjct: 156 CLMVFYKMVNNGLLPDVRNCNRVLK-LLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMM 214

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D   K+G+  RA E+ + + M     PN V+YNV++NGL   G FD   E+ ++M     
Sbjct: 215 DSRCKEGEVGRAVEVLDVMRM-FGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGL 273

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           +  + TY   I G CK    E A  + REM+  G     VTYN ++   CR G++ +   
Sbjct: 274 KVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARR 333

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
             +VM  +  + ++VSYN LI G    G   EA+ ++  LR KN      T+  LI+G C
Sbjct: 334 YLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGC 393

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           + G L+ A                    + + M KHG   +  T   L+ GF Q   L  
Sbjct: 394 RTGNLDIA------------------KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  LF EM  +G  P  ++Y T I G  K+    +A+   +EM  +G+ PD+ITY++LIN
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GLC+    D A +L  +   +G  PD   Y  +IH    +G +  A +++S+M K+   P
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++VTY  L+      G  D A + ++ + ++ + P++I+YN  + GLC  + M  A+   
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 597 NDALCRGILPTTITWHILV 615
            +   +G+ P   T+ IL+
Sbjct: 616 AEMESKGVSPNKYTYTILI 634



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 229/470 (48%), Gaps = 30/470 (6%)

Query: 91  KALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +A++V   M  +FGC+            L  K +F++AK  +  +   GLK   ++Y  +
Sbjct: 225 RAVEVLDVM-RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPL 283

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I G  K      A  +  EM  RG    VV YN ++    + G    A+   + +V E  
Sbjct: 284 IRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE-D 342

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P++V+YN +I G  + G F E L ++  ++         TY + I G C+ GN++ A+
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            +  +M++ G+  D VT+  ++ GFC+ G +    EL++ M  +G   + ++Y   I G 
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE 462

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
           L+ G   +A  + E ++ +    D  T+ VLINGLCK G  +                  
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD------------------ 504

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA  LV +M   G   +  T  S+++  + +  L  A  +F +M +KG  P+VV+Y  LI
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +      R   A  +  EM +KG  P++ITY+ LI GLC+   +D+A  L  +   KG +
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVS 624

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           P+   Y ILI+   +    +DAL+LY +M  R   P+  T++ LM  L K
Sbjct: 625 PNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 199/431 (46%), Gaps = 18/431 (4%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           +++I    K    ++CL ++ +M  N    D       +  L     V   E VY  M++
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
             I    VT+N M+D  C+ G++    E+ +VM   GC  N VSYN+L+ GL   G+ D 
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------------ 376
           A  + E +        + T+  LI G CK     +A  +  E+   G             
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 377 -----GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR++DA   ++ M       +  + N+L+ G+ +      A+ LF E+  K   P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           +VV+YNTLI+G C+      A     +M++ G  PD++T+++L+ G CQ   + MA +L 
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + L +G  PD   Y   I G    G    A  +   MK     P+L+TYN L++GL K 
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ D A E+   +  E + PD ++Y   +        +  A E  +D L +GI P+ +T+
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560

Query: 612 HILVRAVMNNG 622
            +L+ +    G
Sbjct: 561 TVLIHSYAVRG 571


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 279/604 (46%), Gaps = 45/604 (7%)

Query: 54   VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRK 113
            V H +R+L+L+  Q+ +  +D      +  GK    D   D +     + G     LC +
Sbjct: 1112 VTHCNRLLKLLVEQRRW--DDARKLYDEMLGK----DSGADNYSTCVLVRG-----LCLE 1160

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            R+ E+  + + + W  G  P V  Y  +I+G  + GD+   L +  EM  +G    +V Y
Sbjct: 1161 RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTY 1220

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
              LI+   KKGD  +   ++  +  +    PNV  YN +I+ LCKC    + + +  +M 
Sbjct: 1221 GSLINWLGKKGDLEKIGSLFLEM-RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMF 1279

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
             +  + D  T+ + I GLC  G+V  AE   RE +   +  + ++Y  +I GFC  G++ 
Sbjct: 1280 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 1339

Query: 294  ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
               +L  E+MGR    +VV++  LI GL+  GKV EA+ + E + E+    D   + VLI
Sbjct: 1340 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1399

Query: 353  NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
            +GLCK   L  A  IL E+ E                      L DA  +   M+  G  
Sbjct: 1400 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGIC 1459

Query: 396  LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
             +  +CN+++ G+ Q   +  AI     M + GC P   +Y T+I+G  K      A  +
Sbjct: 1460 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1519

Query: 456  VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            + +M+++  KP+++TYS LING C++   D A  L      +  +P+V  Y ILI  L  
Sbjct: 1520 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFK 1579

Query: 516  AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC---------------DKALEI 560
              KV  A   +  M   +C PN VT + L++GL     C               D  L +
Sbjct: 1580 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVV 1639

Query: 561  WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            +  ++ +   P   +YN  +  LC  + + +A +F N    +G +P  IT+  L+    +
Sbjct: 1640 FKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 1699

Query: 621  NGAS 624
             G S
Sbjct: 1700 VGKS 1703



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 272/638 (42%), Gaps = 90/638 (14%)

Query: 3    ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVH------ 56
            +S   L   + +  +P  A+AL         ++ SP   HH+   L DP  + H      
Sbjct: 1002 LSDAHLAAAVSSLPDPDLAVALLS-------WSQSPD--HHVA--LQDPTPLAHSALLRL 1050

Query: 57   ---------VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA 107
                     V   L+ + +           +++ AY    M  KA  + +R+ E +G   
Sbjct: 1051 LARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLP 1110

Query: 108  GI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
             +         L  +R+++ A++  + +  K    D YS   ++ GL             
Sbjct: 1111 EVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC------------ 1158

Query: 159  DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
                ER VE  +     LI+  +  G                   P+VV YNV+I+G C+
Sbjct: 1159 ---LERRVEEGLK----LIEARWGAG-----------------CIPHVVFYNVLIDGYCR 1194

Query: 219  CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             G     L +   M+         TY S I+ L K G++E    ++ EM + G   +   
Sbjct: 1195 RGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQI 1254

Query: 279  YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
            YN++ID  C+     +   + + M   GC  +++++N LI GL   G V +A        
Sbjct: 1255 YNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAI 1314

Query: 338  EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
             +  N +  ++  LI+G C  G L  A  +L  VE  G G   D                
Sbjct: 1315 RRELNPNQLSYTPLIHGFCMRGELMVASDLL--VEMMGRGHTPDVV-------------- 1358

Query: 398  AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
              T  +L++G + A K+  A+ + ++M+ +   P V  YN LI+GLCK      A + ++
Sbjct: 1359 --TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416

Query: 458  EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            EMLEK  +PD   Y+ LI+G  +S+ +  A K+      KG  PD+   N +I G C  G
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFG 1476

Query: 518  KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
             + +A+   SNM+K  C+P+  TY T++ G  K G+ + AL     +++ + +P++++Y+
Sbjct: 1477 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1536

Query: 578  ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              + G C       A     +     + P  +T+ IL+
Sbjct: 1537 SLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILI 1574



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 19/459 (4%)

Query: 165  GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            G      C   L+  +   G   +A ++ ER+  +    P V   N ++  L +  R+D+
Sbjct: 1071 GAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 1130

Query: 225  CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +++D M   +   D+++ C  + GLC    VE   ++      +G     V YN +ID
Sbjct: 1131 ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1190

Query: 285  GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            G+CR G +     L   M  KG L  +V+Y  LI  L + G +++  S++  +R++  + 
Sbjct: 1191 GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250

Query: 344  DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
            +   +  +I+ LCK     +A+ IL +                  M   GC  +  T N+
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQ------------------MFASGCDPDIITFNT 1292

Query: 404  LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            L+ G      +  A    +E  R+  +P  +SY  LI+G C       A   + EM+ +G
Sbjct: 1293 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1352

Query: 464  WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              PD++T+  LI+GL  + K+  AL +  +  ++   PDV +YN+LI GLC    +  A 
Sbjct: 1353 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAK 1412

Query: 524  QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             +   M ++N  P+   Y TL+DG  ++ +   A +I+  +  + + PDI+S N  +KG 
Sbjct: 1413 NILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGY 1472

Query: 584  CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            C    MS+A   +++    G +P   T+  ++      G
Sbjct: 1473 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 217/518 (41%), Gaps = 70/518 (13%)

Query: 101  EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
            +I+      LC+ R   +A   L  ++  G  PD+ ++ T+I GL   G +  A     E
Sbjct: 1253 QIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 1312

Query: 161  MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
               R +  N + Y  LI GF  +G+ M A ++   + M     P+VVT+  +I+GL   G
Sbjct: 1313 AIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM-MGRGHTPDVVTFGALIHGLVVAG 1371

Query: 221  RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            +  E L + ++M + +   D   Y   I GLCK   +  A+ +  EM+E  +  D   Y 
Sbjct: 1372 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1431

Query: 281  AMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
             +IDGF R+  + +  +++E M  KG C ++VS N +I+G  + G + EAI     +R+ 
Sbjct: 1432 TLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 1491

Query: 340  NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
             C  D  T+  +I+G  K G LN A++ L +                  M K  CK N  
Sbjct: 1492 GCIPDEFTYTTVISGYAKQGNLNGALRWLCD------------------MIKRKCKPNVV 1533

Query: 400  TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
            T +SL+NG+ +    + A  LF  M  +  SP VV+Y  LI  L K ++   A  + + M
Sbjct: 1534 TYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 1593

Query: 460  LEKGWKPDMITYSLLINGL----------------------------------------- 478
            L     P+ +T   L+NGL                                         
Sbjct: 1594 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 1653

Query: 479  ---------CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
                     C+   +  AL    +  +KG+ P+   +  L++G CS GK  +   +  N 
Sbjct: 1654 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNE 1713

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
             ++     +  Y  L D       C +   +    L E
Sbjct: 1714 FQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQQYLAE 1751


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 261/540 (48%), Gaps = 61/540 (11%)

Query: 111 CRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           C  R+ E+A   +  + E  G+ P + ++  V++GL KSG +L A+  F E   R +  +
Sbjct: 165 CLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVS 223

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              ++ILI+G  K G  ++A  + +          ++ TY  ++N L K  +  E + + 
Sbjct: 224 AATFSILINGLVKAGMMIQAHSLAQETTTNGCTI-DIHTYTAIVNWLAKNKKIQEAVALM 282

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +++  N       TY + ++GLCK G +E A  + R++V++G   D VTY ++IDG  + 
Sbjct: 283 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 342

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  E ++L++ M  +G  L+ V Y  LIRGLL+ GK+ +A S+++ +    C  D  T 
Sbjct: 343 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTL 402

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+GL K G +  A++I                     M+  G   N    ++L++G 
Sbjct: 403 STMIDGLSKAGRIGAAVRIFKS------------------MEARGLAPNEVVYSALIHGL 444

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K++ A+ +  +M +  C+P  ++YN LI+GLCK      A +F  EMLE G KPD+
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY++LI+GLC++   D A  +        F     +Y+ L+ GLC +GK+E    L+  
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHE 559

Query: 529 MKK---------------------------------RNCVPNLVTYNTLMDGLFKTGDCD 555
           M++                                 +  +P+   YN+++  L K+G  +
Sbjct: 560 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVN 619

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +   ++   +    +PD ++YN  L G+   +RM  A  +  +   RG +P     H L 
Sbjct: 620 EGQAVYQE-MTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLA 678



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 227/436 (52%), Gaps = 22/436 (5%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + +V   N L+D F +   +  A  + +   + T   P+V T+NV+I G C     +E
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKN-ELATIFRPDVETWNVLITGYCLAREPEE 172

Query: 225 CLEMWDRMKKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              +   M+++     S  T+   +HGLCK+G V  A   + E V   + V A T++ +I
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILI 231

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G  +AG + +   L +     GC +++ +Y  ++  L +N K+ EA+++ E +    C 
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT 291

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
               T+  L+NGLCK G L +AI +L ++ +                  +GC  +  T  
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVD------------------NGCTPDVVTYT 333

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL++G  +  +   A  LFKEM+ +G +   V Y  LI GL +  +  +A S  K M   
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD++T S +I+GL ++ +I  A+++      +G  P+  +Y+ LIHGLC A K++ A
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 453

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L++ + MKK  C P+ +TYN L+DGL K+GD + A   ++ +LE   +PD+ +YNI + G
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 513

Query: 583 LCSCSRMSDAFEFLND 598
           LC       A   L+D
Sbjct: 514 LCKAGNTDAACGVLDD 529



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 208/419 (49%), Gaps = 19/419 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V T N +++   +  R  E   +           D  T+   I G C A   E A  V 
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 265 REMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           REM E  G+     T+N ++ G C++GK+    + +E + R   ++  +++ILI GL++ 
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKA 237

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G + +A S+ +      C  D  T+  ++N L KN    K IQ              +A 
Sbjct: 238 GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKN----KKIQ--------------EAV 279

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           +L+ ++  +GC     T N+L+NG  +  +LE AI L +++   GC+P VV+Y +LI+GL
Sbjct: 280 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            K +R  EAY   KEM  +G   D + Y+ LI GL Q+ KI  A  +       G  PDV
Sbjct: 340 GKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDV 399

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
              + +I GL  AG++  A++++ +M+ R   PN V Y+ L+ GL K    D ALE+   
Sbjct: 400 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 459

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +    PD I+YNI + GLC    +  A  F ++ L  G  P   T++IL+  +   G
Sbjct: 460 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAG 518



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 231/483 (47%), Gaps = 38/483 (7%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           S   F  ++  L+   +++    + +      C        +++    KN    +A+ + 
Sbjct: 223 SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALM 282

Query: 97  QRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           +++    GC   I         LC+  + E+A   L  + + G  PDV +Y ++I+GL K
Sbjct: 283 EKITA-NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 341

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
                 A  +F EM  RG+  + VCY  LI G  + G   +A  +++ +     V P+VV
Sbjct: 342 EKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCV-PDVV 400

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T + MI+GL K GR    + ++  M+      +   Y + IHGLCKA  ++ A  +  +M
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 460

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
            ++    D +TYN +IDG C++G ++     ++ M   GC  +V +YNILI GL + G  
Sbjct: 461 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNT 520

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D A  + +     + ++    +  L++GLCK+G L     + +E+E  G           
Sbjct: 521 DAACGVLD-----DMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA--------- 566

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                     N+ T   L+    +A++++ A+ LF  + ++G  P   +YN++I+ L K 
Sbjct: 567 ----------NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKS 615

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  E  +  +EM  + WKPD +TY+ L+NG+  + ++D A     +   +G+ P V++ 
Sbjct: 616 GKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSIL 674

Query: 507 NIL 509
           + L
Sbjct: 675 HKL 677



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 164/338 (48%), Gaps = 21/338 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALF-DSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           V++   L++ L  EK    A  LF + A+R  G A     +  ++R L+    +   S +
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQTGKIPQASSV 386

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILC 111
            + +    C  P+ V LS +I    K      A+ +F+ M       NE+ +      LC
Sbjct: 387 YKTMTSHGC-VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+ + A   L  + +    PD  +Y  +I+GL KSGD+  A A FDEM E G + +V 
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YNILI G  K G+   A  + +   M +S +     Y+ +++GLCK G+ +    ++  
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDD--MSSSRF----VYSSLVDGLCKSGKLEGGCMLFHE 559

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M+++    +S T    I  LCKA  V+ A  ++  + + G+      YN++I    ++GK
Sbjct: 560 MERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGK 617

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           + E   +++ M R    + V+YN L+ G++   ++D A
Sbjct: 618 VNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRA 655



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 35/267 (13%)

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + + +T N+L++ F +  +   A  L K        P V ++N LI G C      
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171

Query: 451 EAYSFVKEMLEK-GWKPDMITYSLLINGLCQSKKIDMAL--------------------- 488
           EA++ ++EM E  G  P + T++L+++GLC+S K+  A+                     
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILI 231

Query: 489 -------------KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
                         L  +    G T D+  Y  +++ L    K+++A+ L   +    C 
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT 291

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P + TYN L++GL K G  ++A+++   I++    PD+++Y   + GL    R  +A++ 
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
             +   RG+   T+ +  L+R ++  G
Sbjct: 352 FKEMASRGLALDTVCYTALIRGLLQTG 378


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 247/507 (48%), Gaps = 25/507 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  +F ++  FL  L  KG  PDV     +I G     ++  A  V  E+ E   E +V
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 147

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +I GF K      A ++  R+       P++VTYN+MI  LC   +    L + D
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALTVLD 206

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++  +       TY   I      G +  A ++  EM+  G+  D  TYNA+I G C+ G
Sbjct: 207 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 266

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   EL   +  KGC  +V+SYNIL+R  L  GK DE   +   +  + C  +  T+ 
Sbjct: 267 MVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326

Query: 350 VLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKH 392
           +LI+ LC+ G +++AI +L  + E                   EGRL  A  +++ M  +
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N+++    +      A+ +F ++   GC P V SYNT+I+ L        A
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 446

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M+ KG  PD ITY+ LI+ LC+   ++ A+ L     Q GF P V  YNI++ G
Sbjct: 447 LGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   +++DA+ +++ M ++ C PN  TY  L++G+   G   +A+E+ N +       D
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR----D 562

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDA 599
           +IS + + K L     M D ++ L+++
Sbjct: 563 VISQD-SFKRLNKTFPMLDVYKELSNS 588



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 214/422 (50%), Gaps = 19/422 (4%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N  CK G+F+E L   + +       D       I G     N+E A RV  E++ES 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              D   YNA+I GFC+  +I+   ++   M  +G L ++V+YNI+I  L    K+  A+
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
           ++ + L   NC     T+ +LI      G +N+A+++L E+   G               
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG +  AA L+  +   GC+ +  + N L+  F+   K +    L  EM  +GC P  
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y+ LI+ LC+  R  EA S +K M+EK   PD  +Y  LI+ LC+  ++D+A+ +   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  G  PD+  YN ++  LC  G    AL++++ ++   C PN+ +YNT++  L+  GD
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL +   ++ + + PD I+YN  +  LC    + +A   L+D    G  PT I+++I
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 614 LV 615
           ++
Sbjct: 503 VL 504



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 217/456 (47%), Gaps = 31/456 (6%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDK 91
           GY     L   +++   + K +   SR++E++E      P+  A  +VI  + K +  + 
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTE--PDVFAYNAVISGFCKVNQIEA 165

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  V  RM           +    G LC +R+   A   L+ L      P V +Y  +I 
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIE 225

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             +  G +  A+ + +EM  RG+  ++  YN +I G  K+G   RA E+   L  +    
Sbjct: 226 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK-GCE 284

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V++YN+++      G++DE  ++   M     E +  TY   I  LC+ G ++ A  V
Sbjct: 285 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 344

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            + M+E  +  D  +Y+ +I   C+ G++     + + M   GCL ++V+YN ++  L +
Sbjct: 345 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 404

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           NG  ++A+ I+  LR   C  + +++  +I+ L   G  ++A+                 
Sbjct: 405 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL----------------- 447

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +V  M   G   +  T NSL++   +   +E AI L  +M + G  PTV+SYN ++ G
Sbjct: 448 -GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           LCKV R  +A     EM+EKG +P+  TY LLI G+
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 2/232 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A   L  + EK L PD YSY  +I+ L K G L  A+ + D M   G   +
Sbjct: 332 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 391

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN ++    K G+  +A EI+ +L       PNV +YN MI+ L  CG     L M 
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMISALWSCGDRSRALGMV 450

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + D  TY S I  LC+ G VE A  +  +M +SG     ++YN ++ G C+ 
Sbjct: 451 PAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            +I +   ++  M  KGC  N  +Y +LI G+   G   EA+ +   L  ++
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 562


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 247/488 (50%), Gaps = 21/488 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C  R+   A   L  L + G +PD  ++ T+I GL   G +  AL +FD+    G + +
Sbjct: 195 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPD 254

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L++G  K G+   A  +   +V + +  PNV+ YN +I+ LCK  +  E   ++
Sbjct: 255 VVTYGTLMNGLCKVGNTSAAIRLLRSMV-QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D FTY S IH LC     +    +  EMV S I  + V ++ ++D  C+ 
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 373

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I    ++ ++M ++G   +VV+Y  L+ G     ++DEA+ +++ +  K C  +  ++
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LING C+   ++KA+ +L ++    +G +AD                  T N+L++G 
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSL--QGLIADTV----------------TYNTLIHGL 475

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM   G  P +V+Y  L++ LCK     EA   +K +       D+
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 535

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y++ I+G+C++ +++ A  L      KG  PDV  YNI+IHGLC  G +++A +L+  
Sbjct: 536 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 595

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +  C  +   YNT++ G  ++ +   A ++   +L E    D+ +  + ++ L S   
Sbjct: 596 MDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML-SDDG 654

Query: 589 MSDAFEFL 596
           +  +FE L
Sbjct: 655 LDQSFERL 662



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 232/478 (48%), Gaps = 20/478 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A    N +      P    +  ++  + K       L++  +M   G+  +V   NI
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+ F        A  +  +L ++    P+  T+N +I GLC  G+  E L ++D+    
Sbjct: 191 LINSFCHLRRLGYAFSVLAKL-LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + D  TY + ++GLCK GN   A R+ R MV+     + + YN +ID  C+  ++ E 
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F L+  M  KG   ++ +YN LI  L    +     ++   +       +      +++ 
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK                  EG +A A  +V+ M K G + +  T  +LM+G    S++
Sbjct: 370 LCK------------------EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ +F  M  KGC P V SYN LING C+++R  +A   +++M  +G   D +TY+ L
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+GLC   ++  A+ L  + +  G  PD+  Y IL+  LC    + +A+ L   ++  N 
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             +++ YN  +DG+ + G+ + A ++++++  + L+PD+ +YNI + GLC    + +A
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 196/401 (48%), Gaps = 19/401 (4%)

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            D+ L  ++RM        +  +   +  + K  +      +  +M   GI  D  T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I+ FC   ++   F +   + + GC  +  ++N LIRGL   GK+ EA+ +++    + 
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              D  T+G L+NGLCK G  + AI++L                    M +  C+ N   
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRS------------------MVQKNCRPNVIA 292

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N++++   +  ++  A  LF EM  KG SP + +YN+LI+ LC +  +    + + EM+
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 352

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
                P+++ +S +++ LC+   I +A  +    +++G  PDV  Y  L+ G C   +++
Sbjct: 353 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 412

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A++++  M  + CVPN+ +YN L++G  +    DKA+ +   +  + L  D ++YN  +
Sbjct: 413 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 472

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            GLC   R+  A    ++ +  G +P  +T+ IL+  +  N
Sbjct: 473 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 513



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +      L+    +       + L  +M   G  P V + N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R G A+S + ++L+ G +PD  T++ LI GLC   KI  AL L  + + +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F PDV  Y  L++GLC  G    A++L  +M ++NC PN++ YNT++D L K     +A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + PDI +YN  +  LC+          LN+ +   I+P  + +  +V A+
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 619 MNNG 622
              G
Sbjct: 371 CKEG 374



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 149/284 (52%), Gaps = 4/284 (1%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F      LC++     A   ++ + ++G++PDV +Y  +++G     ++  A+ VFD M
Sbjct: 362 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 421

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             +G   NV  YNILI+G+ +     +A  + E++ ++  +  + VTYN +I+GLC  GR
Sbjct: 422 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYNTLIHGLCHVGR 480

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
               + ++  M  + +  D  TY   +  LCK  ++  A  + + +  S +  D + YN 
Sbjct: 481 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 540

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            IDG CRAG+++   +L+  +  KG   +V +YNI+I GL + G +DEA  ++  + E  
Sbjct: 541 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           C+ D   +  +I G  ++     A Q+L E+    EG  AD ++
Sbjct: 601 CSRDGCIYNTIIRGFLRSNETFGATQLLQEML--AEGFSADVST 642



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 114/209 (54%)

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           + L++A+  F  M      P+ V +  L+  + K++ +    S   +M   G  PD+ T 
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++LIN  C  +++  A  +  + L+ G  PD T +N LI GLC  GK+ +AL L+     
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P++VTY TLM+GL K G+   A+ +   ++++  RP++I+YN  +  LC   ++++
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMN 620
           AF   ++ + +GI P   T++ L+ A+ N
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCN 337



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 131/257 (50%), Gaps = 14/257 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D+A+ VF  M    GC   +          C+ ++ +KA   L  +  +GL  D  +Y T
Sbjct: 412 DEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+GL   G L  A+A+F EM   G   ++V Y IL+D +  K  ++    +  + +  +
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD-YLCKNHHLAEAMVLLKAIEGS 529

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           ++  +++ YN+ I+G+C+ G  +   +++  +     + D  TY   IHGLCK G ++ A
Sbjct: 530 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGL 320
            +++R+M E+G   D   YN +I GF R+ +     +L + M  +G    VS   LI  +
Sbjct: 590 NKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649

Query: 321 LENGKVDEAISIWELLR 337
           L +  +D++   +E LR
Sbjct: 650 LSDDGLDQS---FERLR 663


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 284/582 (48%), Gaps = 38/582 (6%)

Query: 41  FH--HILRRLIDPKLVVHVSRILELIEIQKCYCPE-----DVALSVIQAYGKNSMPDKAL 93
           FH  +IL+ L+    V+  S + E++   +  C       D   SV+   G   M + A 
Sbjct: 26  FHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELG---MLEAAG 82

Query: 94  DVFQRMNEIF------GCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
             F RM +         C A +  L +  + + ++ F   +   G+ P V++Y  +I  +
Sbjct: 83  QCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHV 142

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            K GD+L A ++F++M + G+  ++V YN LIDG+ K G    +  ++E +       P+
Sbjct: 143 CKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF-MGCEPD 201

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           V+TYN +IN  CK        E +  MK  + + +  +Y + I  LCK G ++ A + + 
Sbjct: 202 VITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFV 261

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           +M   G+  +  TY+++ID  C+AG + E F L + M ++   LN+V+Y  L+ GL E G
Sbjct: 262 DMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG 321

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            ++EA  ++  + +     +   +  LI+G  K   ++KA+++ NE+ E           
Sbjct: 322 MMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMRE----------- 370

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                     K +     +++ G    SKLE    +  EM   G     V Y TL++   
Sbjct: 371 -------KDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF 423

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K     EA + ++EM + G +  ++T+  LI+GLC+   +  A+    +       P+V 
Sbjct: 424 KAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVA 483

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y  LI GLC    + DA +L+  M+ +N +P+ + Y  ++DG  K G+  +AL + N +
Sbjct: 484 VYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           +E  +  D+ +Y   + GL  C ++  A +FL + + +GI+P
Sbjct: 544 MEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIP 585



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 247/499 (49%), Gaps = 20/499 (4%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G +C++     A+     + + GL PD+ +Y T+I+G  K G L  ++ +F+EM   G E
Sbjct: 140 GHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCE 199

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +V+ YN LI+ F K    +RA E + R + +  + PNV++Y+ +I+ LCK G     ++
Sbjct: 200 PDVITYNALINSFCKFKGMLRAFEFF-REMKDKDLKPNVISYSTLIDALCKEGMMQMAIK 258

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +  M +     + FTY S I   CKAGN+  A  +  EM++  + ++ VTY  ++DG C
Sbjct: 259 FFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLC 318

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G + E  EL+  MG+ G   N+ +Y  LI G ++   +D+A+ ++  +REK+   D  
Sbjct: 319 EEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDIL 378

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             G ++ GLC    L +   I+ E++E G G                   N     +LM+
Sbjct: 379 LWGTIVWGLCSESKLEECKIIMTEMKESGIGA------------------NPVIYTTLMD 420

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            + +A     AI L +EM   G   TVV++  LI+GLCK     EA  +   M +   +P
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++  Y+ LI+GLC++  I  A KL  +   K   PD   Y  +I G    G  ++AL + 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + M +     +L  Y +L+ GL + G   +A +    ++ + + PD       L+     
Sbjct: 541 NKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL 600

Query: 587 SRMSDAFEFLNDALCRGIL 605
             + +A E  N+ + +G++
Sbjct: 601 GNIDEAIELQNELVEKGLI 619



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 222/491 (45%), Gaps = 20/491 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P    +  + + LV+ G L  A   F  M +  V       N  +    K G+   +++ 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  +V    + P V TYN+MI  +CK G       ++++MKK     D  TY + I G  
Sbjct: 120 FRDMV-GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K G ++ +  ++ EM   G   D +TYNA+I+ FC+   +   FE +  M  K    NV+
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SY+ LI  L + G +  AI  +  +       +  T+  LI+  CK G L +A  + +E 
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE- 297

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                            M +    LN  T  +L++G  +   +  A  LF+ M + G +P
Sbjct: 298 -----------------MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            + +Y  LI+G  KV    +A     EM EK  KPD++ +  ++ GLC   K++    + 
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  + G   +  +Y  L+     AG   +A+ L   M+       +VT+  L+DGL K 
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   +A+  +  + +  L+P++  Y   + GLC  + + DA +  ++   + ++P  I +
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520

Query: 612 HILVRAVMNNG 622
             ++   + +G
Sbjct: 521 TAMIDGNLKHG 531



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 204/478 (42%), Gaps = 69/478 (14%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV-------VTYNVMING-- 215
           G       Y IL+   F    Y  A  I + LV+ + V P          T NV + G  
Sbjct: 4   GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFG 63

Query: 216 --------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
                   L + G  +   + + RM K      + +  +F+H L KAG  + +   +R+M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVD 327
           V +GI                                     V +YNI+I  + + G + 
Sbjct: 124 VGAGI----------------------------------APTVFTYNIMIGHVCKEGDML 149

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
            A S++E +++     D  T+  LI+G  K G L++++ +  E                 
Sbjct: 150 TARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEE----------------- 192

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M   GC+ +  T N+L+N F +   +  A   F+EM  K   P V+SY+TLI+ LCK  
Sbjct: 193 -MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEG 251

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
               A  F  +M   G  P+  TYS LI+  C++  +  A  L  + LQ+    ++  Y 
Sbjct: 252 MMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYT 311

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L+ GLC  G + +A +L+  M K    PNL  Y  L+ G  K    DKA+E++N + E+
Sbjct: 312 TLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK 371

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            ++PDI+ +   + GLCS S++ +    + +    GI    + +  L+ A    G  T
Sbjct: 372 DIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 44/275 (16%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  + K    DKA+++F  M E        ++G     LC + + E+ K  +  + E 
Sbjct: 347 ALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKES 406

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  +   Y T+++   K+G+   A+ + +EM + G E  VV +  LIDG  K+G    A
Sbjct: 407 GIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEA 466

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCK------------------------------- 218
              + R+  +  + PNV  Y  +I+GLCK                               
Sbjct: 467 IYYFGRMP-DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMID 525

Query: 219 ----CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
                G F E L M ++M +   E D + Y S + GL + G V+ A +   EM+  GI  
Sbjct: 526 GNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIP 585

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           D      ++      G I E  EL   +  KG ++
Sbjct: 586 DETLCTRLLRKHYELGNIDEAIELQNELVEKGLIH 620



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 98/251 (39%), Gaps = 53/251 (21%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW------------------KP 466
           +R G   T  SY  L++ L     +  A + +KE++   W                   P
Sbjct: 1   TRVGFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVP 60

Query: 467 DMITYSLLINGLCQSKKIDMA---------------LKLCCQFLQK-------------- 497
               +  L + L +   ++ A                + C  FL +              
Sbjct: 61  GFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFF 120

Query: 498 ------GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
                 G  P V  YNI+I  +C  G +  A  L+  MKK    P++VTYNTL+DG  K 
Sbjct: 121 RDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKI 180

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  D+++ ++  +      PD+I+YN  +   C    M  AFEF  +   + + P  I++
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 612 HILVRAVMNNG 622
             L+ A+   G
Sbjct: 241 STLIDALCKEG 251


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 261/534 (48%), Gaps = 36/534 (6%)

Query: 96  FQRMNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           F+R      C+    +L  +   E   + L +L   G+K    ++  +I   +K G    
Sbjct: 85  FKRFRAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDK 144

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+  F  M +     +V  YN+++D   +K   + A  ++ R+ M+ +  PNV T++++I
Sbjct: 145 AMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM-MKLNCLPNVATFSILI 203

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +GLCK G   + L ++D M +     D+FTYC  I GLC++  V+ A R++ +M +SG+ 
Sbjct: 204 DGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG 263

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
            D VT NA+++GFC   ++ E F L  +  + G  L+V  Y+ LIRGL    + ++   +
Sbjct: 264 PDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLL 323

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           +  + E N   D   + +++ GL + G +  A+++LNE+ E G                 
Sbjct: 324 YRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCD 383

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G L++A SL   + +H C  N  T + L++G  +     +A  +F EM + GC P+ V+
Sbjct: 384 MGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKP--------------DMITYSLLINGLCQS 481
           +N+LI+GLCK  +  +A+    +M E G  P              D  +   ++  LC S
Sbjct: 444 FNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDS 502

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
             I  A ++  Q    G  P +  YNIL++G C  G    A +L+  M+ +   P+ VTY
Sbjct: 503 GLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTY 562

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            TL++GL +    + A ++++ + +    PD   Y   +  +C    +  AF  
Sbjct: 563 GTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSL 616



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 262/603 (43%), Gaps = 111/603 (18%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLN 124
           D    +I+ Y K  + DKA++ F  M + F C   +         L +K     A     
Sbjct: 127 DAFFVLIKVYLKMGLTDKAMETFGSMRD-FDCTPDVYTYNMILDVLIQKNFLLLALTVYT 185

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            + +    P+V ++  +I+GL KSG++  AL +FDEM +RG+  +   Y ++I G  +  
Sbjct: 186 RMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSK 245

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM---------------- 228
               A  +++++  ++ V P+ VT N ++NG C   R DE   +                
Sbjct: 246 RVDDAYRLFDKM-KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGY 304

Query: 229 -------------------WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
                              + +M ++  + D + Y   + GL +AG V  A  +  EM E
Sbjct: 305 SCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTE 364

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
           SG+  D V YN +I GFC  G + E   L   + R  C  NV +Y+ILI G+  NG   +
Sbjct: 365 SGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRD 424

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------GEG 377
           A  I+  + +  C   + T   LI+GLCK G L KA  +  ++E G           G  
Sbjct: 425 AQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPS 484

Query: 378 RLADAASLVNRMDK-------------------HGCKLNAYTCNSLMNGFIQASKLENAI 418
            + D+ASL   +++                    G     YT N L+NGF +      A 
Sbjct: 485 HVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAY 544

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF+EM  KG SP  V+Y TLINGL + +R  +AY    +M + G  PD   Y  ++  +
Sbjct: 545 KLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWM 604

Query: 479 CQSKKIDMALKLCCQFLQ-------------KGFTP---------------------DVT 504
           C+  ++  A  L  ++L+             +G+                       D+ 
Sbjct: 605 CRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLG 664

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y I + GLC   +V +AL+++  +++   V        L+  L K GD D+A++++ + 
Sbjct: 665 PYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYT 724

Query: 565 LEE 567
           +E+
Sbjct: 725 IEK 727



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 215/461 (46%), Gaps = 67/461 (14%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            + V+I    K G  D+ +E +  M+  +   D +TY   +  L +   +  A  VY  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           ++     +  T++ +IDG C++G +K+   L++ M ++G L +  +Y ++I GL  + +V
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A  +++ +++     D  T   L+NG C          +L+ V+E        A SL+
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFC----------MLDRVDE--------AFSLL 289

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
              +K G  L+    + L+ G  +A + E+   L+++M      P V  Y  ++ GL + 
Sbjct: 290 RLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  +A   + EM E G  PD + Y++LI G C    +  A  L  +  +    P+V  Y
Sbjct: 350 GKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTY 409

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA------LEI 560
           +ILI G+C  G   DA ++++ M+K  C P+ VT+N+L+DGL KTG  +KA      +EI
Sbjct: 410 SILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEI 469

Query: 561 W-------------NHILE--------ERL---------------------RPDIISYNI 578
                         +H+L+        E+L                      P I +YNI
Sbjct: 470 GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNI 529

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            + G C     + A++   +   +G+ P T+T+  L+  ++
Sbjct: 530 LVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLL 570



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 18/313 (5%)

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++ +LI+  L+ G  D+A+  +  +R+ +C  D  T+ ++++ L +  +L  A+      
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLAL------ 181

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                       ++  RM K  C  N  T + L++G  ++  +++A+ LF EM+++G  P
Sbjct: 182 ------------TVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILP 229

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +Y  +I+GLC+ +R  +AY    +M + G  PD +T + L+NG C   ++D A  L 
Sbjct: 230 DAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLL 289

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
             F + G+  DV  Y+ LI GL  A + ED   LY  M + N  P++  Y  +M GL + 
Sbjct: 290 RLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    ALE+ N + E  + PD + YN+ +KG C    +S+A     +       P   T+
Sbjct: 350 GKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTY 409

Query: 612 HILVRAVMNNGAS 624
            IL+  +  NG +
Sbjct: 410 SILISGMCRNGLT 422



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 177/353 (50%), Gaps = 19/353 (5%)

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI V    +  +I  + + G   +  E +  M    C  +V +YN+++  L++   +  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           ++++  + + NC  +  T  +LI+GLCK+G +  A+ + +E                  M
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDE------------------M 222

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G   +A+T   +++G  ++ ++++A  LF +M   G  P  V+ N L+NG C ++R 
Sbjct: 223 TQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRV 282

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA+S ++   + G+  D+  YS LI GL ++K+ +    L  + ++    PDV +Y I+
Sbjct: 283 DEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIM 342

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + GL  AGKV DAL+L + M +   VP+ V YN L+ G    G   +A  +   I     
Sbjct: 343 MKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDC 402

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            P++ +Y+I + G+C      DA E  N+    G  P+ +T++ L+  +   G
Sbjct: 403 FPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTG 455


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 258/535 (48%), Gaps = 29/535 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D AL  F RM  +    + +        + + +Q+       N +   G+ PDVY+   +
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN       L  A +V  ++ + G + +   +  LI G   +G    A  ++++++ E  
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE-G 169

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PNVVTY  +INGLCK G  +  + +   M++   + D   Y S I  LCK   V  A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ +MV  GI  D  TY ++I   C   + K    L  +++  K   +VV ++ ++  L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + GK+ EA  + +++  +    +  T+  L++G C    +++A+++ +           
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT---------- 339

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M  +G   N  + N+L+NG+ +  +++ A +LF+EM +K   P  V+YNTL+
Sbjct: 340 --------MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 391

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +  C V R  +A +   EM+  G  PD+ TY +L++ LC+   +D A+ L          
Sbjct: 392 H-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 450

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+ +Y I+I G+C AG++E A  ++SN+  +   PN+ TY  +++GL + G  D+A ++
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  +      PD  +YN   +GL        A + L + L RG      T  +LV
Sbjct: 511 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 236/476 (49%), Gaps = 21/476 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +   A   L  + + G +PD  ++ T+I GL   G +  AL +FD+M   G + N
Sbjct: 114 FCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPN 173

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +  R + + +  P+VV Y  +I+ LCK  +  E   ++
Sbjct: 174 VVTYGTLINGLCKVGNTNAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M       D FTY S IH LC     +    +  +M+ S I  D V ++ ++D  C+ 
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 292

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GKI E  ++ ++M  +G   NVV+YN L+ G     ++DEA+ +++ +       +  ++
Sbjct: 293 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   ++KA  +  E                  M +     N  T N+LM+  
Sbjct: 353 NTLINGYCKIQRMDKATYLFEE------------------MCQKELIPNTVTYNTLMHX- 393

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM   G  P + +Y  L++ LCK     EA + +K +      PD+
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+++I+G+C++ +++ A  +      KG  P+V  Y I+I+GLC  G +++A +L+  
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           M    C P+  TYNT+  GL +  +  +A+++   +L      D+ +  + ++ LC
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 205/439 (46%), Gaps = 23/439 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ V +N ++  + K  ++     + ++M       D +T    I+  C    +  A  V
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             ++++ G   D  T+  +I G C  GKI +   L++ M  +G   NVV+Y  LI GL +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD- 381
            G  + AI +   + + NC  D   +  +I+ LCK+  + +A  + +++   G+G   D 
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV--GQGISPDI 244

Query: 382 ------------------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                               +L+N+M       +    +++++   +  K+  A  +   
Sbjct: 245 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 304

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G  P VV+YN L++G C      EA      M+  G+ P++I+Y+ LING C+ ++
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D A  L  +  QK   P+   YN L+H  C  G+++DA+ L+  M     +P+L TY  
Sbjct: 365 MDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRI 423

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+D L K    D+A+ +   I    + PDI  Y I + G+C    +  A +  ++   +G
Sbjct: 424 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 483

Query: 604 ILPTTITWHILVRAVMNNG 622
           + P   T+ I++  +   G
Sbjct: 484 LRPNVRTYTIMINGLCRRG 502



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 195/388 (50%), Gaps = 21/388 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ RQ  +A    + +  +G+ PD+++Y ++I+ L    +      + ++M    +  +
Sbjct: 219 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 278

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++ ++D   K+G    A ++ + +++   V PNVVTYN +++G C     DE ++++
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M  N    +  +Y + I+G CK   ++ A  ++ EM +  +  + VTYN ++   C  
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHV 396

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++++   L+  M   G + ++ +Y IL+  L +   +DEA+++ + +   N + D   +
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I+G+C+ G L  A  I +                   +   G + N  T   ++NG 
Sbjct: 457 TIVIDGMCRAGELEAARDIFSN------------------LSSKGLRPNVRTYTIMINGL 498

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ A  LF EM   GCSP   +YNT+  GL + +    A   ++EML +G+  D+
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 558

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            T +LL+  LC  K      ++  +F+Q
Sbjct: 559 STTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 122/247 (49%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NRM       +    N L+    +  +      L  +M   G  P V + N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R G A+S + ++L+ G +PD  T++ LI GLC   KI  AL L  + + +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + PDI +Y   +  LC+          LN  +   I+P  + +  +V A+
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 619 MNNGAST 625
              G  T
Sbjct: 290 CKEGKIT 296



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 45/235 (19%)

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  +S        +++NTL + L    R          ML     P  + ++ L+  + +
Sbjct: 32  FSSLSHNRFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSTVDFNRLLTSIAK 81

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIH----------------------------- 511
           +K+      L  Q    G  PDV   NILI+                             
Sbjct: 82  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTAT 141

Query: 512 ------GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
                 GLC  GK+ DAL L+  M      PN+VTY TL++GL K G+ + A+ +   + 
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +   +PD++ Y   +  LC   ++++AF   +  + +GI P   T+  L+ ++ N
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 256/518 (49%), Gaps = 21/518 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA-VFDEMFERGVETN 169
           CR R+ +    F   L   GL+ D     T +  L  +     AL+ +   M E G   +
Sbjct: 176 CRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPD 235

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I           A ++  R+       P+VV+Y ++I+GL   G   +   ++
Sbjct: 236 AFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLF 295

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +     +  TY S +H LCKA  ++ AE V R+M ++ I  D VTY AMI G+   
Sbjct: 296 NEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCL 355

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ KE  ++++ M R+G + ++V++N L+  L ++ +  EA  I+  +  K    D  ++
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++G                     EGR  D  +L + M  +G   +++  N L+N  
Sbjct: 416 SILLHGYAT------------------EGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ +F EM  +G SP VV+Y T+I  LC++ R  +A   + +M+  G KP+ 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKVEDALQLYS 527
           + Y  LI G C    +  A +L  + + +G   P++T ++ +IH LC+ G+V +A  +++
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            +      P++ T+N+L+DG    G  DKA  + + ++     PD+++Y+  + G     
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           R+ D      + LC+ + PTT+T+ +++  +   G ++
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 263/566 (46%), Gaps = 56/566 (9%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVV 171
           KR  E     L+ + E G  PD +SY TVI  L        AL +   M +  G   +VV
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y ++I G F +G+  +A  ++  +V +  V PNVVTYN +++ LCK    D+   +  +
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMV-QKGVVPNVVTYNSIVHALCKARAMDKAELVLRQ 332

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  N  + D  TY + IHG    G  + A ++++EM   G+  D VT+N+++D  C+  +
Sbjct: 333 MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKR 392

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            KE  E++  +  KG   +++SY+IL+ G    G+  +  +++  + +    ADS    +
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LIN   K G +++A+ I  E+   G                  GRLADA   +++M   G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS----------------------- 430
            K N    +SL+ GF     L  A  L  EM  +G                         
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 431 -------------PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                        P + ++N+LI+G C V +  +A+  +  M+  G +PD++TYS LING
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
             +S +ID  L L  + L K   P    Y++++ GL  AG+   A +++  M +     +
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS 692

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           + TY  ++ GL +    D+A+ +++ +    L+ +I   N  +  L    R  +A +   
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 598 DALCRGILPTTITWHILVRAVMNNGA 623
                G++P   T+ +++  ++  G+
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGS 778



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 276/573 (48%), Gaps = 29/573 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +VI++    S   +ALD+  RM +  GC   +         L  + +  KA    N + +
Sbjct: 241 TVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQ 300

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG+ P+V +Y ++++ L K+  +  A  V  +MF+  ++ + V Y  +I G+   G +  
Sbjct: 301 KGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKE 360

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++++ +  E  + P++VT+N +++ LCK  R  E  E++  +     + D  +Y   +
Sbjct: 361 AAKMFKEMTRE-GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGC 307
           HG    G       ++  M ++GI  D+  +N +I+   + G + E   ++ E+ G+   
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            NVV+Y  +I  L   G++ +A+     +       ++  +  LI G C +G L KA ++
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539

Query: 368 LNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           ++E+ + G                  EGR+ +A  + N +   G + + +T NSL++G+ 
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A  +   M   G  P VV+Y+TLING  K  R  +     +EML K  KP  +
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TYSL+++GL ++ +   A K+  + ++ G    ++ Y I++ GLC     ++A+ L+  +
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
              N    +   NT++  L+K    ++A +++  +    L P+  +Y + +  L     +
Sbjct: 720 GAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A    +     G  P++   + ++R ++  G
Sbjct: 780 EEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 227/470 (48%), Gaps = 34/470 (7%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMR-------AKEIWERLVMETS---VYP-N 205
           +FDE+  +    +    N  +    +  D +        A  ++ R+  E +   V P  
Sbjct: 105 LFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVVPLT 164

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EGAERVY 264
           V TY ++++  C+  R D     + R+ +     D     +F+  LC A    E    + 
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGC-LNVVSYNILIRGLLE 322
             M E G   DA +YN +I   C   + +E  ++   M +  GC  +VVSY ++I GL  
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G++ +A +++  + +K    +  T+  +++ LCK   ++KA  +L +            
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQ------------ 332

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                 M  +  + +  T  ++++G+    + + A  +FKEM+R+G  P +V++N+L++ 
Sbjct: 333 ------MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC-QSKKIDMALKLCCQFLQKGFTP 501
           LCK +R  EA      +  KG KPD+I+YS+L++G   + + +DM   L       G   
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMN-NLFHSMTDNGIVA 445

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   +NILI+     G +++AL +++ M+ +   PN+VTY T++  L + G    A+E  
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           + ++   L+P+ + Y+  ++G C+   +  A E +++ + +GI    IT+
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 21/383 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEV 301
           TY   +   C+A   +     +  ++ +G+  D +  N  +   C A +  E    L   
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAIS-IWELLREKNCNADSTTHGVLINGLCKNG 359
           M   GC+ +  SYN +I+ L    +  EA+  +  + +   C+ D  ++ ++I+GL   G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            ++KA  + NE                  M + G   N  T NS+++   +A  ++ A  
Sbjct: 287 EISKACNLFNE------------------MVQKGVVPNVVTYNSIVHALCKARAMDKAEL 328

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           + ++M      P  V+Y  +I+G   + R+ EA    KEM  +G  PD++T++ L++ LC
Sbjct: 329 VLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLC 388

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           + K+   A ++      KG  PD+  Y+IL+HG  + G+  D   L+ +M     V +  
Sbjct: 389 KHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            +N L++   K G  D+AL I+  +  + + P++++Y   +  LC   R++DA E L+  
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           +  G+ P T+ +H L++    +G
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHG 531



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 184/405 (45%), Gaps = 28/405 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +I A+ K  M D+AL +F  M           +      LCR  +   A   L+ +   G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV-ETNVVCYNILIDGFFKKGDYMRA 189
           LKP+   Y ++I G    GDL+ A  +  EM ++G+   N+  ++ +I     +G  M A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++++  LV+     P++ T+N +I+G C  G+ D+   + D M     E D  TY + I+
Sbjct: 573 QDVFN-LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLIN 631

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
           G  K+G ++    ++REM+   +    VTY+ ++DG  RAG+     +++  M   G  +
Sbjct: 632 GYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++ +Y I+++GL  N   DEAI+++  L   N   +      +I+ L K     +A  + 
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             V   G                 EG + +A  + + M+K GC  ++   N ++   +Q 
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            ++  A +   ++     S    + + LI+      R+ E   F+
Sbjct: 812 GEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 19/292 (6%)

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM--DK 391
           ELLR+     D+  HG  +NG     +L    +  + V       LA A  L NR+  ++
Sbjct: 108 ELLRQ-----DTPVHGRALNG-----FLAALARARDSVACSDAPALAVA--LFNRICREE 155

Query: 392 HGCK---LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
            G +   L  +T   LM+   +A + +     F  + R G     +  NT +  LC  +R
Sbjct: 156 AGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKR 215

Query: 449 FGEAYS-FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMY 506
             EA S  +  M E G  PD  +Y+ +I  LC   +   AL +  +  +  G +PDV  Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            ++IHGL   G++  A  L++ M ++  VPN+VTYN+++  L K    DKA  +   + +
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFD 335

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             ++PD ++Y   + G     R  +A +   +    G++P  +T++ L+ ++
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 10/232 (4%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRF 122
           P+ V  S +I  Y K+   D  L +F+ M           +      L R  +   AK+ 
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + + E G    + +Y  ++ GL ++     A+ +F ++    ++  +   N +I   +K
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                 A +++   V  + + PN  TY VMI  L K G  +E   M+  M+K      S 
Sbjct: 741 VKRREEAHDLFAS-VSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSR 799

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                I  L + G +  A     ++  + I ++A T + +I  F   G+ +E
Sbjct: 800 LLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYRE 851


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 248/507 (48%), Gaps = 25/507 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  +F ++  FL  L  KG  PDV     +I G     ++  A  V  E+ E   E +V
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +I GF K      A ++  R+       P++VTYN+MI  LC   +    L++ D
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALKVLD 196

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++  +       TY   I      G +  A ++  EM+  G+  D  TYNA+I G C+ G
Sbjct: 197 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   EL   +  KGC  +V+SYNIL+R  L  GK DE   +   +  + C  +  T+ 
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316

Query: 350 VLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKH 392
           +LI+ LC+ G +++AI +L  + E                   EGRL  A  +++ M  +
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N+++    +      A+ +F ++   GC P V SYNT+I+ L        A
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              V  M+ KG  PD ITY+ LI+ LC+   ++ A+ L     Q GF P V  YNI++ G
Sbjct: 437 LGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   +++DA+ +++ M ++ C PN  TY  L++G+   G   +A+E+ N +       D
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR----D 552

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDA 599
           +IS + + K L     M D ++ L+++
Sbjct: 553 VISQD-SFKRLNKTFPMLDVYKELSNS 578



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 213/422 (50%), Gaps = 19/422 (4%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N  CK G+F+E L   + +       D       I G     N+E A RV  E++ES 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
              D   YNA+I GFC+  +I+   ++   M  +G L ++V+YNI+I  L    K+  A+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
            + + L   NC     T+ +LI      G +N+A+++L E+   G               
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG +  AA L+  +   GCK +  + N L+  F+   K +    L  EM  +GC P  
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y+ LI+ LC+  R  EA S +K M+EK   PD  +Y  LI+ LC+  ++D+A+ +   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  G  PD+  YN ++  LC  G    AL++++ ++   C PN+ +YNT++  L+  GD
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL +   ++ + + PD I+YN  +  LC    + +A   L+D    G  PT I+++I
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 614 LV 615
           ++
Sbjct: 493 VL 494



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 217/456 (47%), Gaps = 31/456 (6%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDK 91
           GY     L   +++   + K +   SR++E++E      P+  A  +VI  + K +  + 
Sbjct: 98  GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTE--PDVFAYNAVISGFCKVNRIEA 155

Query: 92  ALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A  V  RM           +    G LC +R+   A + L+ L      P V +Y  +I 
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIE 215

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             +  G +  A+ + +EM  RG+  ++  YN +I G  K+G   RA E+   L       
Sbjct: 216 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT-SKGCK 274

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V++YN+++      G++DE  ++   M     E +  TY   I  LC+ G ++ A  V
Sbjct: 275 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 334

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            + M+E  +  D  +Y+ +I   C+ G++     + + M   GCL ++V+YN ++  L +
Sbjct: 335 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 394

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           NG  ++A+ I+  LR   C  + +++  +I+ L   G  ++A+                 
Sbjct: 395 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL----------------- 437

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +V  M   G   +  T NSL++   +   +E AI L  +M + G  PTV+SYN ++ G
Sbjct: 438 -GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           LCKV R  +A     EM+EKG +P+  TY LLI G+
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 2/232 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A   L  + EK L PD YSY  +I+ L K G L  A+ + D M   G   +
Sbjct: 322 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 381

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN ++    K G+  +A EI+ +L       PNV +YN MI+ L  CG     L M 
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMISALWSCGDRSRALGMV 440

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + D  TY S I  LC+ G VE A  +  +M +SG     ++YN ++ G C+ 
Sbjct: 441 PAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 500

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
            +I +   ++  M  KGC  N  +Y +LI G+   G   EA+ +   L  ++
Sbjct: 501 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 552


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 243/498 (48%), Gaps = 23/498 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G +PD Y++ ++I G  ++  +  A  +FD+M  RG   +VV Y  LI+G  + G    A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E++  +       P++  Y  ++ GLC   R +E L M  RMK+      +  Y + + 
Sbjct: 65  VELFGEMDQ-----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD 119

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
             C+    + AE + +EM E G+    VT  A+I+ +C+ G++ +   + E+M  +GC  
Sbjct: 120 FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKP 179

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +YN L++G    GKV +A+++   +R    N D+ T+ +LI G C +G++  A ++L
Sbjct: 180 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL 239

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             +E  G                 +GR   A SL + ++  G K NA T NSL+NG  ++
Sbjct: 240 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 299

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K + A    ++M   GC+P   +Y++ I  LCK++   E  SF+ EML+K  KP  + Y
Sbjct: 300 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 359

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           +++I+ L + +   +  +   + +  G  PDV  Y   +   C  G++ +A  +   M K
Sbjct: 360 TIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 419

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                + + YNTLMDG    G  D A+ I   +      P+  +Y I L+ L     + D
Sbjct: 420 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVED 479

Query: 592 AFEFLNDALCRGILPTTI 609
                   + + I  T +
Sbjct: 480 VLPLTPAGVWKAIELTDV 497



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 24/456 (5%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G   +   +N LI G+ +      A+++++++ +      +VV+Y  +I GLC+ G
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR-GFAQDVVSYATLIEGLCEAG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           R DE +E++  M     + D   Y + + GLC A   E    + R M E G       Y 
Sbjct: 60  RIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYA 115

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLN-VVSYNILIRGLLENGKVDEAISIWELLREK 339
           A++D  CR  K KE  E+ + M  KG    VV+   +I    + G++ +A+ + EL++ +
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 175

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
            C  +  T+  L+ G C  G ++KA+                  +L+N+M   G   +A 
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAM------------------TLLNKMRACGVNPDAV 217

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N L+ G      +E+A  L + M   G      +YN LIN LCK  R  +A S    +
Sbjct: 218 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 277

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             +G KP+ +T++ LINGLC+S K D+A K   + +  G TPD   Y+  I  LC     
Sbjct: 278 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 337

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++ L     M +++  P+ V Y  ++  L K  +       W  ++     PD+++Y  +
Sbjct: 338 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 397

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++  C   R+++A   L +    G+   T+ ++ L+
Sbjct: 398 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 433



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 251/567 (44%), Gaps = 83/567 (14%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++ L + +RM E+        +       CR+R+ ++A+  L  ++EKGL P V +   V
Sbjct: 93  EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 152

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN   K G +  AL V + M  RG + NV  YN L+ GF  +G   +A  +  ++     
Sbjct: 153 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACG 211

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V P+ VTYN++I G C  G  +    +   M+ +    D +TY + I+ LCK G  + A 
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            ++  +   GI  +AVT+N++I+G C++GK    ++  E M   GC  +  +Y+  I  L
Sbjct: 272 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 331

Query: 321 --------------------LENGKVDEAISIWELLREKN---------------CNADS 345
                               ++   V+  I I +LL+E+N               CN D 
Sbjct: 332 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 391

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNR 388
            T+   +   C  G LN+A  +L E+ + G                  G+   A S++ +
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451

Query: 389 MDKHGCKLNAYTCNSLMN-----------------GFIQASKLENAIFLFKEMSRKGCSP 431
           M       N +T   L+                  G  +A +L +   LF  M +    P
Sbjct: 452 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 511

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +Y++++ G  +  R  EA S V  M E     +   Y+ L+   C+SK+   A  L 
Sbjct: 512 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 571

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
           C  +Q GF P +  Y  L+ GL   G+ + A +++ N + ++  P+ + +  ++DGL K 
Sbjct: 572 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 631

Query: 552 GDCDKALEIWNHILEERL--RPDIISY 576
           G  D + E+   I+ ER+  RP   +Y
Sbjct: 632 GHSDISREMI--IMLERMNCRPSHQTY 656



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 187/371 (50%), Gaps = 22/371 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGK 325
           MV SG   DA T+N++I G+CR  ++    +L++ M  +G   +VVSY  LI GL E G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
           +DEA+   EL  E +   D   +  L+ GLC      + + +L  ++E G          
Sbjct: 61  IDEAV---ELFGEMD-QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  E +  +A  ++  M + G      TC +++N + +  ++ +A+ + + M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P V +YN L+ G C   +  +A + + +M   G  PD +TY+LLI G C    I+ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L       G   D   YN LI+ LC  G+ + A  L+ +++ R   PN VT+N+L++GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+G  D A +    ++     PD  +Y+  ++ LC      +   F+ + L + + P+T
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 609 ITWHILVRAVM 619
           + + I++  ++
Sbjct: 357 VNYTIVIHKLL 367



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 223/499 (44%), Gaps = 11/499 (2%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL-------- 110
           R+LEL++++ C        +++Q +       KA+ +  +M         +         
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     E A R L  +   GL  D Y+Y  +IN L K G    A ++FD +  RG++ N 
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N LI+G  K G    A +  E++V      P+  TY+  I  LCK     E L    
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMV-SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 345

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M + + +  +  Y   IH L K  N     R + EMV SG   D VTY   +  +C  G
Sbjct: 346 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 405

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E   +   M + G  ++ ++YN L+ G    G+ D A+SI + +       +  T+ 
Sbjct: 406 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 465

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L+  L +   +   +  L          L D   L + M K+    N+ T +S++ GF 
Sbjct: 466 ILLRHLVRMRLVEDVLP-LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 524

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  + E A  L   M     S     Y  L+   CK +R+ +A+  V  M++ G+ P ++
Sbjct: 525 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 584

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y  L++GL    + D A ++      K ++PD  ++ ++I GL   G  + + ++   +
Sbjct: 585 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIML 644

Query: 530 KKRNCVPNLVTYNTLMDGL 548
           ++ NC P+  TY  L + L
Sbjct: 645 ERMNCRPSHQTYAMLTEEL 663



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 4/243 (1%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L ++M   G   +  +  +L+ G  +A +++ A+ LF EM +    P +  Y  L+ 
Sbjct: 29  ARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVK 84

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC  ER  E    ++ M E GW+P    Y+ +++  C+ +K   A ++  +  +KG  P
Sbjct: 85  GLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 144

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            V     +I+  C  G++ DAL++   MK R C PN+ TYN L+ G    G   KA+ + 
Sbjct: 145 CVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLL 204

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           N +    + PD ++YN+ ++G C    +  AF  L      G++    T++ L+ A+  +
Sbjct: 205 NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 264

Query: 622 GAS 624
           G +
Sbjct: 265 GRT 267


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 254/494 (51%), Gaps = 20/494 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P++Y+   +IN       +  A +V  ++ + G + +   +  LI G + +G    A
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++++++ E    P+VVTY  +INGLCK G     + +   M +   + + F Y + I 
Sbjct: 151 LHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
            LCK   V  A  ++ EMV  GI  D  TYN++I   C   + K    L  E++  K   
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VVS+N ++  L + GKV EA  + + + ++    +  T+  L++G C          +L
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC----------LL 319

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +E++E        A  + + M   GC  N  + N+L+NG+ +  +++ A++LF EM R+ 
Sbjct: 320 SEMDE--------AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V+Y+TLI+GLC VER  +A +   EM+     P+++TY +L++ LC+++ +  A+
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L          PD+ + NI I G+C AG++E A  L+SN+  +   P++ TY+ +++GL
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            + G  D+A +++  + E     +   YN   +G    +  S A + L + + RG     
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 551

Query: 609 ITWHILVRAVMNNG 622
            T  + V+ + ++G
Sbjct: 552 STMTLFVKMLSDDG 565



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 234/475 (49%), Gaps = 20/475 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +   A   L  + + G +PD  ++ T+I G+   G +  AL +FD+M   G   +
Sbjct: 106 FCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPD 165

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G  K G+   A  +   +V + +  PNV  YN +I+ LCK  +  E   ++
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMV-QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D FTY S IH LC     +    +  EMV+S I  D V++N ++D  C+ 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E  ++ + M ++G   NVV+Y  L+ G     ++DEA+ +++ +  K C  +  ++
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING CK   ++KA+ +  E                  M +     +  T ++L++G 
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGE------------------MCRQELIPDTVTYSTLIHGL 386

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               +L++AI LF EM      P +V+Y  L++ LCK     EA + +K +      PD+
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
              ++ I+G+C++ +++ A  L      KG  PDV  Y+I+I+GLC  G +++A +L+  
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           M +  C  N   YNT+  G  +  +  +A+++   ++      D  +  + +K L
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 240/491 (48%), Gaps = 19/491 (3%)

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           GA++ F+ M       + V +N L+    K   +     +  ++     + PN+ T +++
Sbjct: 44  GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMD-SFGIPPNIYTLHIL 102

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           IN  C   R      +  ++ K   + D+ T+ + I G+   G +  A  ++ +M+  G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             D VTY  +I+G C+ G       L   M +K C  NV +YN +I  L ++ +V EA +
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           ++  +  K  + D  T+  LI+ LC          +LNE+ +                  
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            EG++ +A  +V++M + G + N  T  +LM+G    S+++ A+ +F  M  KGC P V+
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SYNTLING CK++R  +A     EM  +   PD +TYS LI+GLC  +++  A+ L  + 
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +     P++  Y IL+  LC    + +A+ L   ++  N  P++   N  +DG+ + G+ 
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           + A ++++++  + L+PD+ +Y+I + GLC    + +A +   +    G       ++ +
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 615 VRAVMNNGAST 625
            R  + N  ++
Sbjct: 523 TRGFLRNNETS 533



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 208/418 (49%), Gaps = 19/418 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A    + +  +G +PDV +YGT+INGL K G+   A+ +   M ++  + NV  YN +I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D   K      A  ++  +V +  + P++ TYN +I+ LC    +     + + M  ++ 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             D  ++ + +  LCK G V  A  V  +M++ G+  + VTY A++DG C   ++ E  +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           +++ M  KGC+ NV+SYN LI G  +  ++D+A+ ++  +  +    D+ T+  LI+GLC
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387

Query: 357 KNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAY 399
               L  AI + +E+    +                   LA+A +L+  ++      +  
Sbjct: 388 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N  ++G  +A +LE A  LF  +S KG  P V +Y+ +INGLC+     EA    +EM
Sbjct: 448 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            E G   +   Y+ +  G  ++ +   A++L  + + +GF+ D +   + +  L   G
Sbjct: 508 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 202/394 (51%), Gaps = 19/394 (4%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D  +  ++RM + +    +  +   +  + K  +      +  +M   GI  +  T + +
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 283 IDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+ FC   ++   F  L +++      +  ++  LIRG+   GK+ EA+ +++ +  +  
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+G LINGLCK G  + AI++L                    M +  C+ N +  
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGS------------------MVQKNCQPNVFAY 204

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++++   +  ++  A  LF EM  KG SP + +YN+LI+ LC +  +    + + EM++
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
               PD+++++ +++ LC+  K+  A  +  + +Q+G  P+V  Y  L+ G C   ++++
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A++++  M  + C+PN+++YNTL++G  K    DKA+ ++  +  + L PD ++Y+  + 
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 384

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           GLC   R+ DA    ++ +    +P  +T+ IL+
Sbjct: 385 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 201/404 (49%), Gaps = 24/404 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC+      A R L S+ +K  +P+V++Y T+I+ L K   +  A  +F EM 
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  ++  YN LI       ++     +   +V ++ + P+VV++N +++ LCK G+ 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKV 287

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  ++ D+M +   E +  TY + + G C    ++ A +V+  MV  G   + ++YN +
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+C+  +I +   L+  M R+  + + V+Y+ LI GL    ++ +AI+++  +   + 
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             +  T+ +L++ LCKN YL +A+ +L  +E                     G L  A  
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L + +   G + + +T + ++NG  +   L+ A  LF+EM   GC+     YNT+  G  
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 527

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLI-----NGLCQSKK 483
           +      A   ++EM+ +G+  D  T +L +     +GL QS K
Sbjct: 528 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 571



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 28/362 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           ++I +  K+    +A ++F  M       +IF   + I  LC   +++     LN + + 
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + PDV S+ TV++ L K G +  A  V D+M +RGVE NVV Y  L+DG     +   A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++++ +V +    PNV++YN +ING CK  R D+ + ++  M + E   D+ TY + IH
Sbjct: 326 VKVFDTMVCK-GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 384

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCL 308
           GLC    ++ A  ++ EMV      + VTY  ++D  C+   + E   L + + G     
Sbjct: 385 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 444

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++   NI I G+   G+++ A  ++  L  K    D  T+ ++INGLC+ G L++A ++ 
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E                  MD++GC LN    N++  GF++ ++   AI L +EM  +G
Sbjct: 505 RE------------------MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546

Query: 429 CS 430
            S
Sbjct: 547 FS 548



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 21/365 (5%)

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            ++GA   +  M+        V +N ++    +         L   M   G   N+ + +
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ILI       +V  A S+   + +     D+ T   LI G+    Y+             
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI----YV------------- 143

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            EG++ +A  L ++M   G + +  T  +L+NG  +      AI L   M +K C P V 
Sbjct: 144 -EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF 202

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNT+I+ LCK  +  EA++   EM+ KG  PD+ TY+ LI+ LC   +      L  + 
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +     PDV  +N ++  LC  GKV +A  +   M +R   PN+VTY  LMDG     + 
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG-ILPTTITWHI 613
           D+A+++++ ++ +   P++ISYN  + G C   R+  A  +L   +CR  ++P T+T+  
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM-YLFGEMCRQELIPDTVTYST 381

Query: 614 LVRAV 618
           L+  +
Sbjct: 382 LIHGL 386



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 171/384 (44%), Gaps = 49/384 (12%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP-EDVALSVIQ 81
            + DS  ++     + +LF  ++ + I P +  + S I  L  +    C  + VA  + +
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL----CEWKHVATLLNE 261

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
                 MPD            F      LC++ +  +A   ++ + ++G++P+V +Y  +
Sbjct: 262 MVDSKIMPDVV---------SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK-----KGDYMRAKEIWERL 196
           ++G     ++  A+ VFD M  +G   NV+ YN LI+G+ K     K  Y+  +   + L
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372

Query: 197 VMETSVY-----------------------------PNVVTYNVMINGLCKCGRFDECLE 227
           + +T  Y                             PN+VTY ++++ LCK     E + 
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   ++ +  + D       I G+C+AG +E A  ++  +   G+  D  TY+ MI+G C
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 492

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G + E  +L+  M   GC LN   YN + RG L N +   AI + + +  +  +AD++
Sbjct: 493 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 552

Query: 347 THGVLINGLCKNGYLNKAIQILNE 370
           T  + +  L  +G      QIL E
Sbjct: 553 TMTLFVKMLSDDGLDQSLKQILRE 576



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 110/212 (51%)

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           +  + ++ AI  F  M R    P+ V +N L+  + K++      S   +M   G  P++
Sbjct: 37  LHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI 96

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            T  +LIN  C   ++  A  +  + L+ G  PD   +  LI G+   GK+ +AL L+  
Sbjct: 97  YTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDK 156

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P++VTY TL++GL K G+   A+ +   ++++  +P++ +YN  +  LC   +
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +++AF   ++ + +GI P   T++ L+ A+ N
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 47/104 (45%)

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ A+  ++ M +    P+ V +N L+  + K       L + + +    + P+I + +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +   C  +R+  AF  L   L  G  P T T+  L+R +   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEG 145


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 263/520 (50%), Gaps = 41/520 (7%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            L   +++ K + FL+S     +K + ++  +V + L+  G   GA A+  +M       
Sbjct: 87  FLANSKRYSKVRSFLDSF----VKNEKHTVSSVFHSLLLDGGRPGATALIIDML------ 136

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            V+ Y   ++       + RAK+   +L + TS  P       +++ L K  +  +   +
Sbjct: 137 -VLAYVKNLELHCAYEAFTRAKDYGFKLSL-TSCNP-------LLSALVKENKIGDVEYV 187

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M K     +  T+  FI+GLC+AG +  AE    +M   GI  + VTYN ++DG+C+
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247

Query: 289 AGKIKECFE----LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            G   + ++    + E++  K C N V++N LI G  ++  V  A   +E ++++    +
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LINGLC NG L +AI                   L ++M   G K N  T N+L
Sbjct: 308 IVTYNSLINGLCNNGKLEEAID------------------LWDKMVGLGLKPNIVTYNAL 349

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NGF +   ++ A  +F ++S++   P V+++NT+I+  CK     E +S    ML++G 
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P++ TY+ LI GLC+ + +  A +L  +   KG   DV  YNILI GLC   K  +A +
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L + M      PN VTYNTLMDG    G    AL +   + +ER +P++++YN+ +KG C
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             +++  A   LN+ L +G+ P   T+ I+   ++  G S
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFS 569



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 211/405 (52%), Gaps = 41/405 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK---SGDLLGALAVFDEMFERGV 166
           LCR  +  KA+  +  +   G+ P+V +Y T+++G  K   +G +  A A   EM    +
Sbjct: 210 LCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKI 269

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N V +N LIDGF K  +   AK+ +E +  +  + PN+VTYN +INGLC  G+ +E +
Sbjct: 270 CPNEVTFNTLIDGFCKDENVAAAKKAFEEM-QKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++WD+M     + +  TY + I+G CK   ++ A +V+ ++ +  +  + +T+N MID +
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G ++E F L   M  +G L NV +YN LI GL     +  A  +   +  K    D 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ +LI+GLCKN                   +  +A  L+N M   G K N  T N+LM
Sbjct: 449 VTYNILIDGLCKND------------------KSRNAEKLLNEMFNLGLKPNHVTYNTLM 490

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G+    KL+ A+ +   M ++   P VV+YN LI G CK+ +   A   + EMLEKG  
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT--MYNI 508
           P+  TY ++        +++M        L+KGF+PD+   +YNI
Sbjct: 551 PNRTTYDIV--------RLEM--------LEKGFSPDIEGHLYNI 579



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 16/254 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHL--FHHILRRLIDPKLVVHVSR 59
           +++   L+N L        A+ L+D      G    P++  ++ ++      K++   ++
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMV---GLGLKPNIVTYNALINGFCKKKMMKEATK 364

Query: 60  ILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
           + + +  Q+   P  +   ++I AY K  M ++   +   M +         + C    L
Sbjct: 365 VFDDVSKQEL-VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CRK+  + AK  LN +  KGLK DV +Y  +I+GL K+     A  + +EMF  G++ N 
Sbjct: 424 CRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNH 483

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN L+DG+  +G    A  +  R+  E    PNVVTYNV+I G CK  + +    + +
Sbjct: 484 VTYNTLMDGYCMEGKLKAALNVRTRMEKERK-QPNVVTYNVLIKGYCKINKLEAANGLLN 542

Query: 231 RMKKNEREKDSFTY 244
            M +     +  TY
Sbjct: 543 EMLEKGLNPNRTTY 556


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 244/487 (50%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P  + +  +++ LVK      A+++   +  +G+ +++V  NILI+ F   G    +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
               +++   +P+V+T   +I GLC  G   + L+  D +   E + D  +Y + I+GLC
Sbjct: 127 LAT-ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLC 185

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K G  + A ++ R + E  I  D V YN +ID  C+   + E   L+  M  K    NVV
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVV 245

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G + EA+++   ++ KN N D  T  +LI+ L                
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL---------------- 289

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
             G EG++  A  ++  M K   K +  T NSL++G+   +++++A ++F  M++ G +P
Sbjct: 290 --GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SY  +I+GLCK +   EA S  +EM  K   P+ IT++ LI+GLC+S +I     L 
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +    DV  Y+ LI  LC    ++ A+ L+  M  +   P++ TY  L+DGL K 
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A E++ H+L +    DI +Y + + G C      +A   L+     G +P  IT+
Sbjct: 468 GRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527

Query: 612 HILVRAV 618
            I++ A+
Sbjct: 528 DIIICAL 534



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 217/424 (51%), Gaps = 20/424 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + + +KA +F + +     + D  SYGT+INGL K G+   A+ +   + ER ++ +
Sbjct: 149 LCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPD 208

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YNI+ID   K      A  ++  +  +  +YPNVVTY  +I G C  G   E + + 
Sbjct: 209 VVMYNIIIDSLCKNKLVGEACNLYSEMNAK-QIYPNVVTYTTLIYGFCIMGCLIEAVALL 267

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + MK      D +T+   I  L K G ++ A+ V   M+++ +  D VTYN+++DG+   
Sbjct: 268 NEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLV 327

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++K    ++  M + G    V SY I+I GL +   VDEAIS++E ++ KN   ++ T 
Sbjct: 328 NEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITF 387

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK+                  GR+A    LV++M       +  T +SL++  
Sbjct: 388 NSLIDGLCKS------------------GRIAYVWDLVDKMRDRSQLADVITYSSLIDAL 429

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L+ AI LFK+M  +   P + +Y  LI+GLCK  R   A    + +L KG+  D+
Sbjct: 430 CKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDI 489

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I+G C++   D AL L  +    G  P+   ++I+I  L    + + A +L   
Sbjct: 490 RTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549

Query: 529 MKKR 532
           M  R
Sbjct: 550 MIAR 553



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 242/498 (48%), Gaps = 22/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + ++F  A      L  KG+  D+ +   +IN     G +  + +V   + +RG   +
Sbjct: 79  LVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPD 138

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-METSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           V+    LI G   +G+  +A +  + +V +E  +  + ++Y  +INGLCK G     +++
Sbjct: 139 VITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL--DRISYGTLINGLCKIGETKAAIQL 196

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +++   + D   Y   I  LCK   V  A  +Y EM    I+ + VTY  +I GFC 
Sbjct: 197 MRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCI 256

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + E   L   M  K    +V +++ILI  L + GK+  A  +  ++ +     D  T
Sbjct: 257 MGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVT 316

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L+     +GY      ++NEV+         A  + N M + G      +   +++G
Sbjct: 317 YNSLV-----DGYF-----LVNEVKH--------AKYVFNSMAQSGVTPGVQSYTIMIDG 358

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   ++ AI LF+EM  K   P  +++N+LI+GLCK  R    +  V +M ++    D
Sbjct: 359 LCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLAD 418

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +ITYS LI+ LC++  +D A+ L  + + +   PD+  Y ILI GLC  G+++ A +++ 
Sbjct: 419 VITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQ 478

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           ++  +    ++ TY  ++ G  K G  D+AL + + + +    P+ I+++I +  L    
Sbjct: 479 HLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKD 538

Query: 588 RMSDAFEFLNDALCRGIL 605
               A + L + + RG+L
Sbjct: 539 ENDKAEKLLREMIARGLL 556



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 222/470 (47%), Gaps = 20/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F+ M           +N ++    K   +  A  + + L  +  +  ++VT N++I
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFK-GITSDLVTLNILI 111

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+      +   + K     D  T  + I GLC  G V+ A + + ++V     
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQ 171

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
           +D ++Y  +I+G C+ G+ K   +L   +  +    +VV YNI+I  L +N  V EA ++
Sbjct: 172 LDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNL 231

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K    +  T+  LI G C  G L +A+ +LNE                  M   
Sbjct: 232 YSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNE------------------MKLK 273

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               + YT + L++   +  K++ A  +   M +    P VV+YN+L++G   V     A
Sbjct: 274 NINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHA 333

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M + G  P + +Y+++I+GLC++K +D A+ L  +   K   P+   +N LI G
Sbjct: 334 KYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDG 393

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++     L   M+ R+ + +++TY++L+D L K    D+A+ ++  ++ + ++PD
Sbjct: 394 LCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPD 453

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +Y I + GLC   R+  A E     L +G      T+ +++      G
Sbjct: 454 MYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAG 503



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 197/418 (47%), Gaps = 18/418 (4%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++ + +++RM        +F + + +  L K      A  + + +   GI  D VT N +
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+ FC  G+I   F +   + ++G   +V++   LI+GL   G+V +A+   + +     
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             D  ++G LINGLCK G    AIQ++  +EE                      + +A +
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L + M+      N  T  +L+ GF     L  A+ L  EM  K  +P V +++ LI+ L 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  +   A   +  M++   KPD++TY+ L++G     ++  A  +     Q G TP V 
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y I+I GLC    V++A+ L+  MK +N +PN +T+N+L+DGL K+G      ++ + +
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +     D+I+Y+  +  LC    +  A       + + I P   T+ IL+  +   G
Sbjct: 411 RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 202/405 (49%), Gaps = 20/405 (4%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           FQ     +G     LC+  + + A + + +L E+ +KPDV  Y  +I+ L K+  +  A 
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC 229

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            ++ EM  + +  NVV Y  LI GF   G  + A  +   + ++ ++ P+V T++++I+ 
Sbjct: 230 NLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLK-NINPDVYTFSILIDA 288

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           L K G+      +   M K   + D  TY S + G      V+ A+ V+  M +SG+   
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
             +Y  MIDG C+   + E   L+E M  K  + N +++N LI GL ++G++     + +
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +R+++  AD  T+  LI+ LCKN +L++AI                  +L  +M     
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAI------------------ALFKKMITQEI 450

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + + YT   L++G  +  +L+ A  +F+ +  KG    + +Y  +I+G CK   F EA +
Sbjct: 451 QPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALA 510

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
            + +M + G  P+ IT+ ++I  L +  + D A KL  + + +G 
Sbjct: 511 LLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 262/523 (50%), Gaps = 32/523 (6%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK----GLKPDVYSY 138
           A+D+  R     GC             LC + + ++A   L+++       G  PDV SY
Sbjct: 150 AMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSY 209

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVINGL++ G L  A  +FDEM ++G+  N + YN L+ G+   G    A  I+ ++  
Sbjct: 210 TTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR 269

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+VVTYN ++  LCK GR  E  +++D M K   + DS  Y + +HG    G + 
Sbjct: 270 D-GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLV 328

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
              ++   MV +G   D   +N +I  + + G + E    +  M ++G   N+V+Y  ++
Sbjct: 329 QMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVM 388

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
             L   GKVD+A+S ++ L  +    +      LI+GLC     +KA ++  E+   G  
Sbjct: 389 DALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC 448

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG +  A ++ + M +   + +  T  +L++G+    K++ A  L
Sbjct: 449 PNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL 508

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            + M   G  P  V+YNT+ING CK  R  +A S  ++M  KG  P ++ YS +++GL Q
Sbjct: 509 LEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +++I  A +L    ++ G    +  YNI++ GLC     +DAL+++ N+   +      T
Sbjct: 569 TRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT 628

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +N ++D L K G  D+A +++  +L   L P++++Y + +K L
Sbjct: 629 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 671



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 262/555 (47%), Gaps = 57/555 (10%)

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
           SL+ +  + D+ +Y  VI    ++G L  A A    +   G     + ++ L+ G     
Sbjct: 86  SLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDK 145

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE----KD 240
               A +I  R +      PN  +YN+++ GLC   R  + L +   M  ++       D
Sbjct: 146 RTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPD 205

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             +Y + I+GL + G ++ A  ++ EM++ G+  + +TYN ++ G+C +GK KE   ++ 
Sbjct: 206 VVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFR 265

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M R G   +VV+YN L+  L +NG+  EA  +++ + +K    DS+ +G L++G    G
Sbjct: 266 KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
           YL +  Q+L+ +   G                  G + +A    ++M + G   N  T  
Sbjct: 326 YLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYG 385

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++M+   +  K+++A+  F  +  +G +P  V + TLI+GLC  +++ +A     EM+ +
Sbjct: 386 TVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR 445

Query: 463 GWKP-----------------------------------DMITYSLLINGLCQSKKIDMA 487
           G  P                                   D+ITY+ LI+G C   K+D A
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            KL    +  G  P+   YN +I+G C  G++EDA  L+  M  +   P +V Y+T++ G
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           LF+T     A E++  +++  ++  I +YNI L+GLC  +   DA    ++         
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQ 625

Query: 608 TITWHILVRAVMNNG 622
             T++I++ A++  G
Sbjct: 626 NRTFNIMIDALLKGG 640



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 267/548 (48%), Gaps = 34/548 (6%)

Query: 20  TALALFDSATREPGYAHSPHLFHH--ILRRLIDPKLVVHVSRILE--LIEIQKCYCPEDV 75
           T+ A+  +  R P    +P+ F +  +L+ L D         +L   + +  +  CP DV
Sbjct: 147 TSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDV 206

Query: 76  A--LSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNS 125
               +VI    +    DKA  +F  M +         + C     C   + ++A      
Sbjct: 207 VSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   G++PDV +Y T++  L K+G  + A  VFD M ++G + +   Y  L+ G+  +G 
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            ++  ++ + +V      P+   +N++I    K G  DE +  + +M++     +  TY 
Sbjct: 327 LVQMHQLLDVMV-RNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYG 385

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGR 304
           + +  LC+ G V+ A   +  ++  G+  + V +  +I G C   K  +  EL  E++GR
Sbjct: 386 TVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR 445

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
             C N + +N L+  L + G V  A +I++L+   +   D  T+  LI+G C +G +++A
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
            ++L       EG + D           G K N  T N+++NG+ +  ++E+A  LF++M
Sbjct: 506 TKLL-------EGMVLD-----------GVKPNEVTYNTIINGYCKNGRIEDACSLFRQM 547

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           + KG +P +V Y+T+++GL +  R   A      M++ G K  + TY++++ GLCQ+   
Sbjct: 548 ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCT 607

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D AL++        F      +NI+I  L   G+ ++A  L++++  R  VPN+VTY  +
Sbjct: 608 DDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 667

Query: 545 MDGLFKTG 552
           M  L + G
Sbjct: 668 MKSLIEQG 675



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 200/406 (49%), Gaps = 28/406 (6%)

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           L +++RM +     D  TY   I    +AG+++ A      ++ +G    A+T++ ++ G
Sbjct: 85  LSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKG 140

Query: 286 FCRAGKIKECFEL-WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--- 340
            C   +  +  ++    M   GC  N  SYNIL++GL +  +  +A+ +   +   +   
Sbjct: 141 LCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRG 200

Query: 341 -CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
            C  D  ++  +INGL + G L+KA  + +E                  M   G   N  
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDE------------------MLDQGMSPNCI 242

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N L++G+  + K + AI +F++M R G  P VV+YNTL+  LCK  R  EA      M
Sbjct: 243 TYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSM 302

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           ++KG KPD   Y  L++G      +    +L    ++ G  PD  ++NILI      G V
Sbjct: 303 VKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMV 362

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A+  +S M+++   PN+VTY T+MD L + G  D A+  ++ ++ E L P+ + +   
Sbjct: 363 DEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTL 422

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + GLC+C +   A E   + + RGI P TI ++ L+  +   G  T
Sbjct: 423 IHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/502 (22%), Positives = 228/502 (45%), Gaps = 51/502 (10%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV- 79
           A  +FDS  ++ G+     ++  +L        +V + ++L+++ ++    P+    ++ 
Sbjct: 295 ARKVFDSMVKK-GHKPDSSIYGTLLHGYATEGYLVQMHQLLDVM-VRNGTQPDHYIFNIL 352

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           I AY K+ M D+A+  F +M +                           +GL P++ +YG
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQ---------------------------QGLHPNIVTYG 385

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           TV++ L + G +  A++ FD +   G+  N V +  LI G      + +A+E+   ++  
Sbjct: 386 TVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR 445

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             + PN + +N ++N LCK G       ++D M + + + D  TY + I G C  G V+ 
Sbjct: 446 -GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDE 504

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A ++   MV  G+  + VTYN +I+G+C+ G+I++   L+  M  KG    +V Y+ ++ 
Sbjct: 505 ATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILH 564

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL +  ++  A  ++  + +        T+ +++ GLC+N   + A+++ +         
Sbjct: 565 GLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHN-------- 616

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                  +  +D H   L   T N +++  ++  + + A  LF  +  +G  P VV+Y  
Sbjct: 617 -------LCLIDFH---LQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 666

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           ++  L +     E       + + G   D    + L+  L Q  ++  A     +  +  
Sbjct: 667 MMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENN 726

Query: 499 FTPDVTMYNILIHGLCSAGKVE 520
           F+ + +    L+  L S+GK +
Sbjct: 727 FSLEASTAESLVF-LVSSGKYD 747


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 279/622 (44%), Gaps = 79/622 (12%)

Query: 21  ALALFDSATREP------GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
            L  FD A+  P      G AHS      +L+ L   ++   +  +LE ++ Q      +
Sbjct: 77  GLKFFDWASTRPFSCSLDGVAHSS-----LLKLLASYRVFPEIELVLENMKAQHLKPTRE 131

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
              ++I AY ++   D+AL +F  + E+  C             L +  + + A +  + 
Sbjct: 132 AFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDK 191

Query: 126 LWEK----GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           + +     G   D Y+   ++ GL   G +     +    + +    +VV YN++IDG+ 
Sbjct: 192 MLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYC 251

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           KKGD   A      L M+  V P V TY  +ING CK G F+   ++   M       + 
Sbjct: 252 KKGDLQCATRALNELKMK-GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 310

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             + + I    K G V  A  + R M E G   D  TYN MI+  C+ G+I+E  EL E 
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK 370

Query: 302 MGRKGCL------------------------------------NVVSYNILIRGLLENGK 325
              +G L                                    ++VSY   I G++  G+
Sbjct: 371 AKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGE 430

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           +D A+ + E + EK    D+  + +L++GLCK                  +GR+     L
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNILMSGLCK------------------KGRIPAMKLL 472

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           ++ M     + + Y   +L++GFI+  +L+ AI +FK + RKG  P +V YN +I G CK
Sbjct: 473 LSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 532

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  +A S + EM      PD  TYS +I+G  +   +  ALK+  Q ++  F P+V  
Sbjct: 533 FGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 592

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  LI+G C    +  A +++S MK  + VPN+VTY TL+ G FK G  ++A  I+  +L
Sbjct: 593 YTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 566 EERLRPDIISYNITLKGLCSCS 587
                P+  +++  + GL + +
Sbjct: 653 MNGCLPNDATFHYLINGLTNTA 674



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 267/540 (49%), Gaps = 30/540 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVE 167
           +L   R F + +  L ++  + LKP   ++  +I    +SG L  AL +F  + E     
Sbjct: 104 LLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCF 163

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV---TYNVMINGLCKCGRFDE 224
              V  N+L++G  K G    A +++++++        VV   T ++M+ GLC  G+ +E
Sbjct: 164 PTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEE 223

Query: 225 CLEMWDRMKKNEREKDSFTYCSF----IHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
                 R+ K+   K    +  F    I G CK G+++ A R   E+   G+     TY 
Sbjct: 224 ----GRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYG 279

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           A+I+GFC+AG+ +   +L   M  +G  +NV  +N +I    + G V EA  +   + E 
Sbjct: 280 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEM 339

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
            C  D TT+ ++IN  CK G + +A ++L + +E G                 +G    A
Sbjct: 340 GCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKA 399

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           + ++ R+ + G K +  +  + ++G + A +++ A+ + ++M  KG  P    YN L++G
Sbjct: 400 SGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSG 459

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK  R       + EML++  +PD+  ++ LI+G  ++ ++D A+K+    ++KG  P 
Sbjct: 460 LCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPG 519

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  YN +I G C  GK+ DAL   + M   +  P+  TY+T++DG  K  D   AL+++ 
Sbjct: 520 IVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG 579

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +++ + +P++I+Y   + G C  + M  A +  +      ++P  +T+  LV      G
Sbjct: 580 QMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAG 639



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 242/570 (42%), Gaps = 103/570 (18%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K   + A R LN L  KG+ P V +YG +ING  K+G+      +  EM  RG+  NV
Sbjct: 251 CKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 310

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N +ID  +K G    A E+  R+  E    P++ TYN+MIN  CK GR +E  E+ +
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMA-EMGCGPDITTYNIMINFSCKGGRIEEADELLE 369

Query: 231 RMKKNEREKDSFTYC-----------------------------------SFIHGLCKAG 255
           + K+     + F+Y                                    +FIHG+  AG
Sbjct: 370 KAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAG 429

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYN 314
            ++ A  V  +M+E G+F DA  YN ++ G C+ G+I      L E++ R    +V  + 
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFA 489

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE---- 370
            LI G + NG++DEAI I++++  K  +     +  +I G CK G +  A+  LNE    
Sbjct: 490 TLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSV 549

Query: 371 -----------VEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                      V +G   +  ++ A  +  +M KH  K N  T  SL+NGF + + +  A
Sbjct: 550 HHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRA 609

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             +F  M      P VV+Y TL+ G  K  +   A S  + ML  G  P+  T+  LING
Sbjct: 610 EKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669

Query: 478 L-------------------------------------------------CQSKKIDMAL 488
           L                                                 C+   +D A 
Sbjct: 670 LTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQ 729

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + L KGF  D   +  L+HGLC  GK ++   + S    +  +   V Y+  +D  
Sbjct: 730 LLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKY 789

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNI 578
              G   +A  I   ++E+    D +  ++
Sbjct: 790 LYQGRLSEASVILQTLVEDSKFSDQVEKDL 819


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 272/564 (48%), Gaps = 64/564 (11%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L R R    A+   NS+ +    P   ++  ++N L +      A A  D   +   + 
Sbjct: 95  LLVRHRTLRAAENVRNSMIKSCTSPHDATF--LLNLLRRMNT---AAAAADHQHQLAFKL 149

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMET--SVYPNVVTYNVMINGLCKCGRFDECL 226
           ++  YN L+    +         +++ ++ +   SV+PN++T N M+N  CK G      
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
             + R+ + E   D FTY S + G C+  +VE A  V+  M       +AV+Y  +I G 
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGL 265

Query: 287 CRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C AGK+ E  E W  M   GC   V +Y +L+  L E+G+  EA+S++  +RE+ C  + 
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+ VLI+ LCK G +++A+++LNE+ E G                  G + DA  ++  
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV-- 446
           M+      N  T N L+ GF +   ++ A+ L  +M     SP VV+YNTLI+GLC+V  
Sbjct: 386 MESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGV 445

Query: 447 ---------------------------------ERFGEAYSFVKEMLEKGWKPDMITYSL 473
                                             R GEA+  ++ + EK  K +   Y+ 
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G C++ KI+ A  L  + L +   P+   +N++I GL   GKV+DA+ L  +M K +
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P L TYN L++ + K  D D+A EI N ++    +P++++Y   +K  CS  R+ +A 
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           E +      G+L  +  +++L+ A
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINA 649



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/641 (24%), Positives = 285/641 (44%), Gaps = 66/641 (10%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           ++   L +L     +P TAL  F    R   + HS    H +L  L+  + +     +  
Sbjct: 51  LTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRN 110

Query: 63  LIEIQKCYCPEDVAL-------------------------------SVIQAYGKNSMPDK 91
            + I+ C  P D                                   ++    + SM D+
Sbjct: 111 SM-IKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDE 169

Query: 92  ALDVFQRM-----NEIF------GCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            + +++ M     N +F             C+      A+ F   +      PD+++Y +
Sbjct: 170 MISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTS 229

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++ G  ++ D+  A  VF  M  R    N V Y  LI G  + G    A E W R+  E 
Sbjct: 230 LVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARM-RED 284

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
             +P V TY V++  LC+ GR  E L ++  M++   E + +TY   I  LCK G ++ A
Sbjct: 285 GCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEA 344

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRG 319
            ++  EMVE G+    V +NA+I  +C+ G +++   +  +M  +K C NV +YN LI G
Sbjct: 345 LKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICG 404

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
                 +D A+++   + E   + D  T+  LI+GLC+ G ++ A ++   +   G    
Sbjct: 405 FCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPD 464

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         GR+ +A  ++  + +   K N +   +L++G+ +A K+E+A  LFK
Sbjct: 465 QWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFK 524

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M  + C P  +++N +I+GL K  +  +A   V++M +   KP + TY++L+  + +  
Sbjct: 525 RMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEY 584

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
             D A ++  + +  G+ P+V  Y   I   CS G++E+A ++   +K    + +   YN
Sbjct: 585 DFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L++     G  D A  +   +      P  ++Y+I +K L
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/564 (26%), Positives = 275/564 (48%), Gaps = 60/564 (10%)

Query: 91  KALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           +AL +F  M E  GCE  +         LC++ + ++A + LN + EKG+ P V  +  +
Sbjct: 308 EALSLFGEMRE-RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I    K G +  A+ V   M  + V  NV  YN LI GF +     RA  +  ++V E+ 
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV-ESK 425

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+VVTYN +I+GLC+ G  D    ++  M ++    D +T+ +F+  LC+ G V  A 
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
           ++   + E  +  +   Y A+IDG+C+AGKI+    L++ M  + CL N +++N++I GL
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + GKV +A+ + E + + +      T+ +L+  + K    ++A +ILN +   G     
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       +GRL +A  +V ++   G  L+++  N L+N +     L++A  + + 
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665

Query: 424 MSRKGCSPTVVSYNTLINGLCKVER------------------------------FGEAY 453
           M   GC P+ ++Y+ L+  L  +E+                              FG   
Sbjct: 666 MFGTGCEPSYLTYSILMKHLV-IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITT 724

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              ++M E G  P++ TYS LINGLC+  ++++A  L     + G +P   ++N L+   
Sbjct: 725 VLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSC 784

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G   +A+ L  +M + + + +L +Y  L+ GLF+  + +KA  ++  +L      D 
Sbjct: 785 CKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDE 844

Query: 574 ISYNITLKGLCSCSRMSDAFEFLN 597
           +++ + + GL     +    E LN
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLN 868



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 169/612 (27%), Positives = 272/612 (44%), Gaps = 72/612 (11%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELI---EIQK-----CYCPEDVALS---VIQAYGKNSM 88
            F  ILR    P L  + S +L      ++++     C  P   A+S   +I    +   
Sbjct: 211 FFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGK 270

Query: 89  PDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
             +AL+ + RM E  GC   +         LC   +  +A      + E+G +P+VY+Y 
Sbjct: 271 LHEALEFWARMRED-GCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I+ L K G +  AL + +EM E+GV  +VV +N LI  + K+G  M    +    +ME
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRG--MMEDAVGVLGLME 387

Query: 200 TS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V PNV TYN +I G C+    D  + + ++M +++   D  TY + IHGLC+ G V+
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A R++R M+  G   D  T+NA +   CR G++ E  ++ E +  K    N  +Y  LI
Sbjct: 448 SASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G  + GK++ A S+++ +  + C  +S T  V+I+GL K                  EG
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK------------------EG 549

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ DA  LV  M K   K   +T N L+   ++    + A  +   +   G  P VV+Y 
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
             I   C   R  EA   V ++  +G   D   Y+LLIN       +D A  +  +    
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 498 GFTPDVTMYNILI-HGLCSAGKVEDA----------------------------LQLYSN 528
           G  P    Y+IL+ H +    K E +                              L+  
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEK 729

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +  CVPNL TY+ L++GL K G  + A  +++H+ E  + P  I +N  L   C    
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGM 789

Query: 589 MSDAFEFLNDAL 600
             +A   L+  +
Sbjct: 790 FGEAVTLLDSMM 801



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 40/249 (16%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAG-----ILCRKRQFEKAKR------------ 121
           +I AYG   + D A  V +RM    GCE       IL +    EK K+            
Sbjct: 646 LINAYGCMGLLDSAFGVLRRMFGT-GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSL 704

Query: 122 -----------------FLNSLWEK----GLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                                L+EK    G  P++ +Y  +INGL K G L  A +++  
Sbjct: 705 TNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M E G+  + + +N L+    K G +  A  + + + ME S   ++ +Y ++I GL +  
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM-MECSHLAHLESYKLLICGLFEQM 823

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             ++   ++  + +     D   +   I GL K G V+    +   M ++G  +   TY+
Sbjct: 824 NKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYS 883

Query: 281 AMIDGFCRA 289
            ++    RA
Sbjct: 884 MLMQELNRA 892


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 252/515 (48%), Gaps = 23/515 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGV-ET 168
           C KR  +  K  L  + E G  PD +SY  V+  L        AL +   M  E GV   
Sbjct: 55  CTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSP 114

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV YN +I GFFK+G   +A  ++  + M+    P+VVT+N +IN LCK    D    +
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEM-MQQGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             +M  N    +  TY S IHG    G  E A +++REM   G+  D V++N+ +D  C+
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G+ KE  E++  M  KG   N+V+Y IL+ G    G   + +S +  ++     A+   
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +LI+   K G +++A+ IL+E                  M   G   + +T ++L++ 
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSE------------------MQGQGLSPDVFTYSTLISA 335

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KP 466
             +  +L +A+  F +M   G  P  V Y++LI G C      +A   V EM+  G  +P
Sbjct: 336 LCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP 395

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++  ++ +++ +C+  ++  A  +       G   D+ M+N LI G C  G++  A  + 
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M      P+  TYNTL++G FK+G  D  L ++  + +++++P  ++YNI L GL   
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            R   A + L++ +  G   +  T++I+++ +  N
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRN 550



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 244/531 (45%), Gaps = 58/531 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLK------------------------------------PD 134
           CR R+ E    F   L   GLK                                    PD
Sbjct: 19  CRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPD 78

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMF-ERGV-ETNVVCYNILIDGFFKKGDYMRAKEI 192
            +SY  V+  L        AL +   M  E GV   +VV YN +I GFFK+G   +A  +
Sbjct: 79  AFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNL 138

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +  + M+    P+VVT+N +IN LCK    D    +  +M  N    +  TY S IHG  
Sbjct: 139 YHEM-MQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYS 197

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
             G  E A +++REM   G+  D V++N+ +D  C+ G+ KE  E++  M  KG   N+V
Sbjct: 198 TLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIV 257

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y IL+ G    G   + +S +  ++     A+     +LI+   K G +++A+ IL+E+
Sbjct: 258 TYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM 317

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           +  G                  GRLADA    N+M   G + N    +SL+ GF     L
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL 377

Query: 415 ENAIFLFKEMSRKGCS-PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
             A  L  EM   G   P +  +N++++ +CK  R  +A+     + + G + D+I ++ 
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNT 437

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI+G C   ++  A  +    +  G  PD   YN L++G   +G+++D L L+  M  + 
Sbjct: 438 LIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKK 497

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
             P  VTYN ++DGLF+ G    A ++ + ++       + +YNI LKGLC
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/615 (23%), Positives = 272/615 (44%), Gaps = 66/615 (10%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A  +L  L   K    A+ +      E G       +  +L+RL D         +L +
Sbjct: 45  AANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRM 104

Query: 64  IEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
           +  ++  C  DV    +VI  + K     KA +++  M +                LC+ 
Sbjct: 105 MAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKA 164

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R  + A+  L  + + G+ P+  +Y ++I+G    G    A  +F EM  RG+  ++V +
Sbjct: 165 RAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSW 224

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC---------------- 217
           N  +D   K G    A EI+  +  +    PN+VTY ++++G                  
Sbjct: 225 NSFMDSLCKHGRSKEAAEIFYSMAAKGH-RPNIVTYGILLHGYATEGCFADMMSFFNTMK 283

Query: 218 -------------------KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                              K G  DE + +   M+      D FTY + I  LC+ G + 
Sbjct: 284 GDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLA 343

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
            A   + +M+ +G+  + V Y+++I GFC  G + +  EL   M   G    N+  +N +
Sbjct: 344 DAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSI 403

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  + + G+V +A  I++L+++    +D      LI+G C  G + KA  +L+ +   G 
Sbjct: 404 VHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGI 463

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G                   + +T N+L+NG+ ++ ++++ + LF+EMS K   PT V+Y
Sbjct: 464 GP------------------DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTY 505

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +++GL +  R   A   + EM+  G    + TY++++ GLC++   D A+ +  +   
Sbjct: 506 NIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCT 565

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                ++T  N +I+ + +  + E+A  L+S +     VPN  TY  ++  L K G  ++
Sbjct: 566 MNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEE 625

Query: 557 ALEIWNHILEERLRP 571
           A  +++ + +    P
Sbjct: 626 ADNMFSSMEKSGCAP 640



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 213/495 (43%), Gaps = 95/495 (19%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P + TY V++NG C+  R +  L  + R+ +   + D     + +  LC     + A +V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 264 -YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL---NVVSYNILIRG 319
             R M E G   DA +Y  ++   C   + ++  +L  +M ++  +   +VV+YN +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             + GK+ +A +++  + ++    D  TH  +IN LCK                    R 
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCK-------------------ARA 166

Query: 380 ADAASLVNR-MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
            D A L+ R M  +G   N  T  S+++G+    + E A  +F+EM+ +G  P +VS+N+
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING--------------------- 477
            ++ LCK  R  EA      M  KG +P+++TY +L++G                     
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286

Query: 478 --------------LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
                           +   +D A+ +  +   +G +PDV  Y+ LI  LC  G++ DA+
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI----------------WNHIL-- 565
             ++ M      PN V Y++L+ G    GD  KA E+                +N I+  
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHS 406

Query: 566 ---EERL---------------RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
              E R+               R DII +N  + G C    M  AF  L+  +  GI P 
Sbjct: 407 ICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPD 466

Query: 608 TITWHILVRAVMNNG 622
           T T++ LV     +G
Sbjct: 467 TFTYNTLVNGYFKSG 481



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 3/229 (1%)

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS-FVK 457
           +T   +MNG  +A + E  +  F  + R G      + NT++  LC  +R  +A    ++
Sbjct: 9   FTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLR 68

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGF-TPDVTMYNILIHGLCS 515
            M E G  PD  +Y++++  LC   +   AL L      ++G  +PDV  YN +IHG   
Sbjct: 69  RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFK 128

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            GK+  A  LY  M ++  VP++VT+N++++ L K    D A  +   +++  + P+ ++
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           Y   + G  +  R  +A +   +   RG++P  ++W+  + ++  +G S
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 21/485 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C +    +A++    + E GL P+V  Y T+++G  K+ D+  A  +++EM ++G+  +
Sbjct: 358 FCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPD 417

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +NIL+ G +K G    + E++    + +S+ P+   Y+V + GLC  G+ DE ++  
Sbjct: 418 GATFNILVAGNYKYGKEADSYELFRDWSL-SSLVPDCSLYDVSVAGLCWAGQLDEAMQFL 476

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +         + S I    +AG  + A + Y+ M+  G+   + T ++M+ G  + 
Sbjct: 477 EDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKK 536

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++E  +L   M  KG  +N V++ +L+ G  + G    A S+W  +  +    D+   
Sbjct: 537 GRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAF 596

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
              I+GL K G + +A +  +E+ + G                  G+L +A  L   M +
Sbjct: 597 SAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQ 656

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   + +T N ++NGF +  ++++A   F EM   G +P  V+YNTLI G CKV     
Sbjct: 657 KGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVS 716

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A  F+ +M   GW PD+ TY++ I G C S+KI  A+ +  + +  G  P+   YN +++
Sbjct: 717 ADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMN 776

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            +C+   ++ A+ L + + K   VPN+VT N L+    K G  +KAL IW   L + LR 
Sbjct: 777 AVCT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKLNKLLRA 834

Query: 572 DIISY 576
           D I Y
Sbjct: 835 DFIGY 839



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 247/510 (48%), Gaps = 20/510 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+K     A+  L  + +   +PDVY+Y  +IN     G    AL     M + G + +
Sbjct: 288 FCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPS 347

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ ++ +I  F  +G+ + A++I+E  + E  + PNV  YN +++G  K     +   ++
Sbjct: 348 LITFSTIITAFCNEGNVVEARKIFEG-IQEVGLSPNVAMYNTLMSGYFKARDVCQANMLY 406

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+      D  T+   + G  K G    +  ++R+   S +  D   Y+  + G C A
Sbjct: 407 EEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWA 466

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  +  E M  KG   +VV++N +I      G  D A   ++++        S+T 
Sbjct: 467 GQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTC 526

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             ++ GL K                  +GRL +A  L+ +M   G  +N      L++G+
Sbjct: 527 SSMLLGLSK------------------KGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGY 568

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +      A  L+ EM  +G  P  ++++  I+GL K     EAY    EM +KG+ P+ 
Sbjct: 569 FKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI+GLC   K+  ALKL  +  QKG  PD+   NI+I+G C  G+++ A   ++ 
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAE 688

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P+ VTYNTL+ G  K  D   A E  N +      PDI +YNI ++G CS  +
Sbjct: 689 MHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQK 748

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +S A   L++ +  G++P T+T++ ++ AV
Sbjct: 749 ISRAVTMLDELIAVGVVPNTVTYNTMMNAV 778



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 152/304 (50%), Gaps = 13/304 (4%)

Query: 66  IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFG-------CEAGIL--CRKRQ 115
           ++K   P  VA  SVI AY +    D A   ++ M  +FG       C + +L   +K +
Sbjct: 480 LEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM-LMFGLVPSSSTCSSMLLGLSKKGR 538

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            ++A+  L  + +KGL  +  ++  +++G  K GD  GA +++ EM  RG+  + + ++ 
Sbjct: 539 LQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSA 598

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
            IDG  K G    A E +  +  +  V PN   YN +I+GLC CG+  E L++   M++ 
Sbjct: 599 FIDGLSKAGLVEEAYEAFSEMSKKGFV-PNNFVYNSLIHGLCNCGKLHEALKLEREMRQK 657

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D FT    I+G CK G ++ A   + EM   G+  D VTYN +I G+C+   +   
Sbjct: 658 GLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSA 717

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            E    M   G   ++ +YNI I+G   + K+  A+++ + L       ++ T+  ++N 
Sbjct: 718 DEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA 777

Query: 355 LCKN 358
           +C +
Sbjct: 778 VCTD 781



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 18/309 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N L+RG + +    E++ I   +RE      S+   +L   L + G      ++L     
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL----- 266

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G + D     N           +  N ++  F Q   L  A  L   M +  C P V
Sbjct: 267 --RGMIRDGPRPCN-----------HNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDV 313

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            +YN LIN      R  +A  F+  M++ G KP +IT+S +I   C    +  A K+   
Sbjct: 314 YAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEG 373

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G +P+V MYN L+ G   A  V  A  LY  M+ +   P+  T+N L+ G +K G 
Sbjct: 374 IQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGK 433

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
              + E++       L PD   Y++++ GLC   ++ +A +FL D L +G+ P+ + ++ 
Sbjct: 434 EADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNS 493

Query: 614 LVRAVMNNG 622
           ++ A    G
Sbjct: 494 VIAAYSRAG 502



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 11/229 (4%)

Query: 71  CPEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKR 121
           CP+ +A S  I    K  + ++A + F  M        N ++      LC   +  +A +
Sbjct: 590 CPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + +KGL PD+++   +ING  K G +  A   F EM   GV  + V YN LI G+ 
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYC 709

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K  D + A E   ++   +   P++ TYN+ I G C   +    + M D +       ++
Sbjct: 710 KVLDMVSADEFLNKMY-ASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNT 768

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            TY + ++ +C    ++ A  +  ++++     + VT N ++  FC+ G
Sbjct: 769 VTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQG 816



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +I  + K      A D F  M+ I        +    G  C+      A  FLN ++  G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             PD+ +Y   I G   S  +  A+ + DE+   GV  N V YN +++      D +   
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT--DMLDRA 786

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +    +++ +  PNVVT NV+++  CK G  ++ L    ++ K  R      +  +I  
Sbjct: 787 MVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLNKLLRADFIGYWLVYILS 846

Query: 251 LCKAGNVEGAERVYREMV 268
           + K       + +Y  M+
Sbjct: 847 MDKQATAGSTKFIYWLML 864


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 253/510 (49%), Gaps = 24/510 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD-LLGALAVFDEMFERGVE 167
           +L       +A++ L+ L   GL   V S    ++ +  + + +  A+ VF    E G+ 
Sbjct: 199 VLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGIS 255

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   YNI+I    + G    A  +  ++   +S  P+VV+Y+ +I+G C  G   + L+
Sbjct: 256 WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST-PDVVSYSTVIDGYCHLGELKKALK 314

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M+    + + +TY S I  LCK G    AE+V REM+   I  D V Y  +I GF 
Sbjct: 315 LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G ++   + + E++ +K   + ++Y  LI+G  + GKV E  +++  +  +    D  
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI+  CK                   G + +A SL N M + G   N  T  +L++
Sbjct: 435 TYTTLIDVYCK------------------AGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +  +L+ A  L  EM +KG    V  YN+++NG+CK     +A   +KEM   G  P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D ITY+ +I+  C+   ID A KL  + L +G  P V  +N+L++G C  G +ED  +L 
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M ++  VP+ +TYNTLM         +   +I+  +  + + PD  +YNI +KG C  
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVR 616
             + +A+    + + +G +PT  +++ L++
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIK 686



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 236/469 (50%), Gaps = 20/469 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A R L  +  +   PDV SY TVI+G    G+L  AL + D+M  +G++ N
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I    K G    A+++  R +M   + P+ V Y  +I+G  K G      + +
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVL-REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M   +   D  TY + I G  + G V   + ++ EM+  G+  D VTY  +ID +C+A
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++   F L   M + G   N+V+Y  LI GL ++G++D A  + + +R+K    +   +
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             ++NG+CK G + +AI+++ E+E  G                     +A T  ++++ +
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAG------------------IDPDAITYTTVIDAY 548

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A  L +EM  +G  PTVV++N L+NG C +    +    +  MLEKG  PD 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ L+   C    ++   K+  +   +G  PD   YNILI G C A  +++A  LY  
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           M ++  VP + +YN L+   +K     +A E++  +    L  D   YN
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 212/431 (49%), Gaps = 20/431 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN + +++    L + G   E  ++ D++          +  +F+  +  A N EG E  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI--ANNSEGIEMA 245

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLE 322
            +   E GI  +  +YN +I   CR GK+KE   L   M  R    +VVSY+ +I G   
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ +A+ + + ++ K    +  T+  +I  LCK G   +A ++L E+           
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G +  A    + M       +  T  +L+ GF Q  K+     LF EM 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +G  P  V+Y TLI+  CK      A+S   EM++ G  P+++TY  LI+GLC+  ++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L  +  +KG   +V +YN +++G+C AG +E A++L   M+     P+ +TY T++
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D   + GD DKA ++   +L+  L+P ++++N+ + G C    + D    L   L +GI+
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 606 PTTITWHILVR 616
           P  IT++ L++
Sbjct: 606 PDAITYNTLMK 616



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 23/373 (6%)

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRK 305
           F   L + G++  A ++  +++  G+ V   + NA +    R     E  E+  +V    
Sbjct: 196 FFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEMAIKVFCEY 252

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   N  SYNI+I  L   GKV EA  +   +  ++   D  ++  +I+G C  G L KA
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           ++++++                  M   G K N YT NS++    +  K   A  + +EM
Sbjct: 313 LKLMDD------------------MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +   P  V Y TLI+G  K+     A  +  EML K   PD ITY+ LI G  Q  K+
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                L  + + +G  PD   Y  LI   C AG++ +A  L++ M +    PN+VTY  L
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G+ D A E+ + + ++ L+ ++  YN  + G+C    +  A + + +    GI
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 605 LPTTITWHILVRA 617
            P  IT+  ++ A
Sbjct: 535 DPDAITYTTVIDA 547



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 136/352 (38%), Gaps = 93/352 (26%)

Query: 39  HLFHHILRRLIDPKLVVHVSRI--------------LELIEIQKCYCPEDVAL-SVIQAY 83
           +LFH ++ R + P  V + + I              L    +Q    P  V   ++I   
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 84  GKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
            K+   D A ++   M +        I+      +C+    E+A + +  +   G+ PD 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF-----FKKGD----- 185
            +Y TVI+   + GD+  A  +  EM +RG++  VV +N+L++GF      + GD     
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 186 ---------------YMRAKEIWERLVMETSVY---------PNVVTYNVMINGLCKCGR 221
                           M+   I   +   T +Y         P+  TYN++I G C    
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC---- 654

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                          KA N++ A  +Y+EM+E G      +YNA
Sbjct: 655 -------------------------------KARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
           +I  F +  KI E  EL+E M   G + +   YN  +    E G V+  +++
Sbjct: 684 LIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 44/230 (19%)

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSR-----KGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            + L++ +   SKLE  + + +   R     K   P  ++++     L ++    EA   
Sbjct: 153 AHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKL 212

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQ-SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           + ++L  G    + + +  ++ +   S+ I+MA+K+ C++   G + + T YNI+I+ LC
Sbjct: 213 LDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLC 269

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GKV++A +L   M  R+  P                                   D++
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTP-----------------------------------DVV 294

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           SY+  + G C    +  A + ++D   +G+ P   T++ ++  +   G S
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKS 344


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 238/478 (49%), Gaps = 33/478 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPD----VYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           +L R+ + + A R ++SL   GL P     V     +I  L  SG    A  V       
Sbjct: 76  VLVRRGELDDALRLVDSL--AGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----A 128

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
               +V+ YN ++ G+   G    A+    RLV +  V P+  TYN +I GLC  GR   
Sbjct: 129 ASGPDVMVYNAMVAGYCGAGQLDAAR----RLVADMPVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            L + + M +     D  TY   +   CK    + A ++  EM + G   D VTYN +++
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+ G++++  E  + +   GC  N VSYNI+++GL    + ++A  + E +  K C  
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           +  T  +LI+ LC+ G +  A+++L ++ + G                 + ++  A   V
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   GC  +  + N+L+    +  +++ AI L  ++  KGCSP ++SYNT+I+GL K 
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA   + EM  KG +PD+ITYS + +GLC+  +I+ A++  C+    G  P   +Y
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALY 484

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           N ++ GLC   +  +A+ L++ M    C+PN  TY  L++GL   G   +A E++  +
Sbjct: 485 NAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 209/406 (51%), Gaps = 27/406 (6%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I  LC  GR  +      R        D   Y + + G C AG ++ A R+  +M   
Sbjct: 109 ALIKKLCASGRTADA-----RRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADM--- 160

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
            +  DA TYN +I G C  G+      + E M R+GCL +VV+Y IL+    +     +A
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + + + + +K C  D  T+ V++NG+C+                  EGR+ DA   +  +
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQ------------------EGRVEDAMEFLKNL 262

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
             +GC+ N  + N ++ G   A + E+A  L +EM+ KGC P VV++N LI+ LC+    
Sbjct: 263 PSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLV 322

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A   +++M + G  P+ ++Y+ L++  C+ KKI  A++     + +G  PD+  YN L
Sbjct: 323 EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTL 382

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  LC  G+V+ A++L   +K + C P L++YNT++DGL K G   +ALE+ + +  + L
Sbjct: 383 LTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGL 442

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +PDII+Y+    GLC   R+ +A          GI PT   ++ ++
Sbjct: 443 QPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 167/320 (52%), Gaps = 17/320 (5%)

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTH--GVLINGLCKNGYLNKAIQIL------ 368
           +R L+  G++D+A+ + + L   N  + +       LI  LC +G    A ++L      
Sbjct: 74  LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASGPD 133

Query: 369 ----NEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
               N +  G  G G+L  A  LV  M     + +AYT N+L+ G     +  NA+ + +
Sbjct: 134 VMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLE 190

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           +M R+GC P VV+Y  L+   CK   + +A   + EM +KG  PD++TY++++NG+CQ  
Sbjct: 191 DMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           +++ A++        G  P+   YNI++ GL +A + EDA +L   M  + C PN+VT+N
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+  L + G  + A+E+   + +    P+ +SYN  L   C   ++  A EF+   + R
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370

Query: 603 GILPTTITWHILVRAVMNNG 622
           G  P  ++++ L+ A+  NG
Sbjct: 371 GCYPDIVSYNTLLTALCRNG 390



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 143/291 (49%), Gaps = 17/291 (5%)

Query: 32  PGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNS 87
           P Y   P+   +  +L+ L   +      +++E  E+    CP +V     +I    +  
Sbjct: 263 PSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME--EMAHKGCPPNVVTFNMLISFLCRRG 320

Query: 88  MPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           + + A++V ++M + +GC    L         C++++  KA  F+  +  +G  PD+ SY
Sbjct: 321 LVEPAMEVLEQMPQ-YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSY 379

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            T++  L ++G++  A+ +  ++ ++G    ++ YN +IDG  K G    A E+ + +  
Sbjct: 380 NTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTS 439

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  + P+++TY+ + +GLC+  R +E +  + +++       +  Y + + GLCK     
Sbjct: 440 K-GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            A  ++  M+ SG   +  TY  +++G    G +KE  EL+  +  +G +N
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVN 549


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 289/613 (47%), Gaps = 52/613 (8%)

Query: 9   LNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQK 68
           L+LL     PH+       A   P       LF  +  RL  P  ++H   ++ ++    
Sbjct: 59  LSLLSRRLTPHSVADALLCAALPPASRLRLFLFSALTPRLRSP--LLHSRAVVPILLATD 116

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILCRKRQFEKAKRFLNSLW 127
                  A++  QA G    P  A +       IF    AG     R  E    F     
Sbjct: 117 ADAAMYDAIADAQAAGLQP-PAAAFEAL-----IFAHASAG-----RHHEAVDAFSRMEG 165

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLG-ALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
           E G +P  + Y  V+  LV SG ++  ALA+++ M   G   N   YN+L+DG  K+G  
Sbjct: 166 EFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTA 225

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           + A ++++ + ++  + PNV T+ ++++ +C  G+  E   + + M+      D  TY +
Sbjct: 226 VDALKLFDEM-LQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNA 284

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVT-YNAMIDGFCRAGKIKECFELW-EVMGR 304
           F+ GLCKAG V+ A      +  +G FV  +  Y+ +IDG   AG+ +E F+ + EV+ +
Sbjct: 285 FLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQ 344

Query: 305 KG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
                ++V Y I+IRG  E G++D+A + ++ ++EK    D+  +  L+  LC +G L+ 
Sbjct: 345 ADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDG 404

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A                   SL++ M ++   L+  T   +++G  +   ++ A+ +F  
Sbjct: 405 A------------------RSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDG 446

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI-------------- 469
           M   GC PTV++YN LI+GL +  R  EA     +M E G  P +               
Sbjct: 447 MVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSE 505

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +   L++ +CQS ++  A KL    +  G  PDV  YN L++GLC    ++ AL+L+  +
Sbjct: 506 SLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFREL 565

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           + +    + +TY TL+D L +    + A+ ++  IL     P +  YN  ++ LC  +++
Sbjct: 566 QVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKL 625

Query: 590 SDAFEFLNDALCR 602
           S A  F  D L +
Sbjct: 626 SQAINFWFDHLLK 638



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 232/476 (48%), Gaps = 39/476 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET- 168
           +C   Q ++A+  LNS+ +KG  PD  +Y   ++GL K+G +  A+   + +   G    
Sbjct: 254 MCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVL 313

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +  Y+ LIDG F  G Y    + +  ++ +    P++V Y +MI G  + GR D+    
Sbjct: 314 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAF 373

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D MK+     D+F Y + +  LC +G+++GA  +  EM ++ + +D  T+  MI G C+
Sbjct: 374 FDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCK 433

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-------------E 334
              + E  ++++ M   GC   V++YN+LI GL    +++EA  ++              
Sbjct: 434 KQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 493

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
           L    N   DS +   L++ +C++G + KA ++L  +                 MD  G 
Sbjct: 494 LTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGI-----------------MDS-GV 535

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             +  T N+L+NG  +   L+ A+ LF+E+  KG S   ++Y TLI+ L +  R+ +A +
Sbjct: 536 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMT 595

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL- 513
             +++L  G  P +  Y+ ++  LC+  K+  A+      L K +  +++  + +I    
Sbjct: 596 LFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKY--NLSAQDEVIASAR 653

Query: 514 --CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
                G +++A++    + +     N   Y   + GL +    D AL+I+ HILEE
Sbjct: 654 KKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIF-HILEE 708



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 205/468 (43%), Gaps = 69/468 (14%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEG-AE 261
           P    +  +I      GR  E ++ + RM+        +F Y + +  L  +G V   A 
Sbjct: 135 PPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLAL 194

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            +Y  MV +G   +  TYN ++DG C+ G   +  +L++ M ++G   NV ++ IL+  +
Sbjct: 195 ALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSM 254

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G++ EA ++   + +K C  D  T+   ++GLCK G +++AI+ L  +   G   L 
Sbjct: 255 CNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLG 314

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGCSPTVVSYNTL 439
                          L  Y+C  L++G   A + E     + E + +   SP +V Y  +
Sbjct: 315 ---------------LKGYSC--LIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIM 357

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I G  +  R  +A++F  EM EK + PD   Y+ L+  LC S  +D A  L  +  Q   
Sbjct: 358 IRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNV 417

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK--------- 550
             D   + I+IHGLC    V++A+Q++  M +  C P ++TYN L+DGL++         
Sbjct: 418 VLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARM 477

Query: 551 ---------------------------------------TGDCDKALEIWNHILEERLRP 571
                                                  +G   KA ++   I++  + P
Sbjct: 478 LFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVP 537

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           D+++YN  L GLC    +  A     +   +G     IT+  L+ +++
Sbjct: 538 DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLL 585



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 134/254 (52%), Gaps = 4/254 (1%)

Query: 373 EGGEGRLADAASLVNRMD-KHGCKLNAYTCNSLMNGFIQASKLEN-AIFLFKEMSRKGCS 430
               GR  +A    +RM+ + GC+   +  N+++   + +  +   A+ L+  M   GC 
Sbjct: 147 HASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCL 206

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   +YN L++GLCK     +A     EML++G  P++ T+++L++ +C + ++  A  L
Sbjct: 207 PNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENL 266

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC-VPNLVTYNTLMDGLF 549
                 KG  PD   YN  + GLC AG+V++A++    +++    V  L  Y+ L+DGLF
Sbjct: 267 LNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLF 326

Query: 550 KTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             G  ++  + +  +LE+    PDI+ Y I ++G     R+ DAF F ++   +   P T
Sbjct: 327 LAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDT 386

Query: 609 ITWHILVRAVMNNG 622
             ++ L++A+ ++G
Sbjct: 387 FCYNTLLKALCDSG 400



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 153/360 (42%), Gaps = 93/360 (25%)

Query: 102 IFGC-EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           I GC EAG      + + A  F + + EK   PD + Y T++  L  SGDL GA ++  E
Sbjct: 358 IRGCAEAG------RIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSE 411

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M +  V  +   + I+I G  KK     A ++++ +V E   +P V+TYNV+I+GL +  
Sbjct: 412 MAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMV-EVGCHPTVMTYNVLIDGLYRAH 470

Query: 221 RFDECLEMWDRM-------------------KKNEREK---------------------- 239
           R +E   ++ +M                   K +E  +                      
Sbjct: 471 RLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGI 530

Query: 240 -------DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  D  TY + ++GLCK  N++GA R++RE+   G  +D +TY  +ID   RA + 
Sbjct: 531 MDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRY 590

Query: 293 KECFELWE-VMGRKGCLNVVSYNILIRGL------------------------------- 320
            +   L++ ++   G  ++  YN ++R L                               
Sbjct: 591 NDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIA 650

Query: 321 -----LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
                 E G +DEA+     + ++  + +S  + + + GL +   ++ A++I + +EE G
Sbjct: 651 SARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESG 710



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 51/309 (16%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM-------- 161
           LC+K+  ++A +  + + E G  P V +Y  +I+GL ++  L  A  +F +M        
Sbjct: 431 LCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSL 490

Query: 162 FER-GVETNVV----CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           F R  +  N V        L+D   + G  ++A ++  R +M++ V P+VVTYN ++NGL
Sbjct: 491 FLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLL-RGIMDSGVVPDVVTYNTLLNGL 549

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK    D  L ++  ++      D  TY + I  L +A     A  ++++++  G     
Sbjct: 550 CKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSL 609

Query: 277 VTYNAMIDGFCRAGKIKECFELW--------------EVMG--RK--------------- 305
             YN+++   CR  K+ +    W              EV+   RK               
Sbjct: 610 SIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELI 669

Query: 306 ------GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
                 G +N   Y I + GL++  ++D+A+ I+ +L E   +        L   LC   
Sbjct: 670 KIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEK 729

Query: 360 YLNKAIQIL 368
            L+ A+ ++
Sbjct: 730 NLDSAVDVM 738



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 16/243 (6%)

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L  R+  H    +A  C +L      AS+L   +FLF  ++ +  SP + S   ++  L 
Sbjct: 62  LSRRLTPHSVA-DALLCAAL----PPASRLR--LFLFSALTPRLRSPLLHS-RAVVPILL 113

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK----IDMALKLCCQFLQKGFT 500
             +     Y  + +    G +P    +  LI     + +    +D   ++  +F   G  
Sbjct: 114 ATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEF---GCR 170

Query: 501 PDVTMYNILIHGL-CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           P   +YN ++  L  S G V  AL LY+ M    C+PN  TYN LMDGL K G    AL+
Sbjct: 171 PTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALK 230

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           +++ +L+  + P++ ++ I L  +C+  ++ +A   LN    +G  P  +T++  +  + 
Sbjct: 231 LFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLC 290

Query: 620 NNG 622
             G
Sbjct: 291 KAG 293


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 251/512 (49%), Gaps = 22/512 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            R      A    + +  KG   D   Y  VI   V+ G    A+ +FDEM   GV+ + 
Sbjct: 161 ARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDE 220

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             Y I I G  K  D  RA ++  ++  E    P  +TY+ +++ L K GR DE L + D
Sbjct: 221 RVYAITISGLCKLRDADRALQVLGKM-REAGFEPWELTYSSVVDVLVKVGRMDEALRLKD 279

Query: 231 RMK-KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +M     ++ D       +HG C  G V  A  ++ E+V  G+    VTY  +I G    
Sbjct: 280 QMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAE 339

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G   E ++L   M  +G L +   +N++I+GLL + +  +AI + EL+ +     D  T+
Sbjct: 340 GMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTY 398

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           G LI+ LCK+  L++A+ + ++++E G                   K +  T +SL+ G+
Sbjct: 399 GCLIHWLCKHQKLHEAVNLWDKMKEAG------------------VKPSIVTYHSLLLGY 440

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +++ A+ L+ EM  KG  P  V+Y TL+ G  K + F  AY+ + EM + G     
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY++LINGL    ++    ++  +FL +GF P    YN +I+G   AG +  A  +Y  
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+K+   PN+VTY + +DG  +T  CD A+++  ++  + ++PDI +YN  +   C    
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           MS A  FL   L  G+ P    ++  V    N
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKN 652



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 280/581 (48%), Gaps = 29/581 (4%)

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAK 120
           CY    +   VI+A  +  M   A+ +F  M          ++      LC+ R  ++A 
Sbjct: 181 CYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRAL 240

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYNILIDG 179
           + L  + E G +P   +Y +V++ LVK G +  AL + D+M    G + +VV   +L+ G
Sbjct: 241 QVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHG 300

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           +   G+  +A ++++ +V +  V P  VTY V+I G    G  DE  ++  +M +     
Sbjct: 301 YCLHGEVGKALDLFDEVVSD-GVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLL 359

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
            ++ +   I GL +    + A  +   +V++G+  D  TY  +I   C+  K+ E   LW
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M   G   ++V+Y+ L+ G  E G++DEA+ ++  + +K    +  T+  L+ G  K 
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 359 GYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRMDKHGCKLNAYTC 401
              + A  +LNE+ + G                   R+ +   ++ R    G      T 
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NS++NGF++A  + +A  ++++M +KG +P +V+Y + I+G C+      A   +  +  
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +PD+  Y+  I+  C+   +  AL      L+ G TPDVT+YN  + G  +   + +
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A + Y +M K+  V +   Y TL+DG  K G+   ALE+++ ++   + PD  ++     
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTH 718

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           GLC    +  A   L+D     + P  +T+++L+ A + +G
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDG 759



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 21/362 (5%)

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y  MV  G+  DA +   ++    R     +   L++ M  KGC  +   Y+++IR  + 
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G   +A+ +++ +       D   + + I+GLCK    ++A+Q+L ++ E G       
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAG------- 250

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS-RKGCSPTVVSYNTLIN 441
                       +    T +S+++  ++  +++ A+ L  +M    G    VV    L++
Sbjct: 251 -----------FEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMH 299

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C     G+A     E++  G  P  +TY +LI G       D   KLC Q +++G   
Sbjct: 300 GYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLL 359

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
               +N++I GL    + +DA+ L   +     VP++ TY  L+  L K     +A+ +W
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + + E  ++P I++Y+  L G C   RM +A +  ++   +G  P  +T+  L++  +  
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 622 GA 623
            A
Sbjct: 479 KA 480



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 1/205 (0%)

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           +  M  +G  P   S   L+    +     +A +   EM  KG   D   Y ++I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
                 A++L  +    G  PD  +Y I I GLC     + ALQ+   M++    P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 541 YNTLMDGLFKTGDCDKALEIWNH-ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           Y++++D L K G  D+AL + +  +L    + D++   + + G C    +  A +  ++ 
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 600 LCRGILPTTITWHILVRAVMNNGAS 624
           +  G+ PT +T+ +L++     G S
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMS 342


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 255/551 (46%), Gaps = 63/551 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +R+   A+R L +L   G   D  S+ T++ G  + G L  A  V +     G   N
Sbjct: 129 LCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERVLEAARASGA-AN 186

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LIDG+ + G    A     RL+    V P+  TYN ++ GLC   +++E  E+ 
Sbjct: 187 VVTYTALIDGYCRSGRLTDAL----RLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELM 242

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +N    +  T+ + I   C+ G ++ A  +  +M + G   D V Y+ +++GF   
Sbjct: 243 REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEH 302

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G++ +  +L   M  +   N V YN  ++GL   G+ DE   +   +  K+C  +  T  
Sbjct: 303 GRVDDALKLLSTMLCRP--NTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFS 360

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG---------------------------------- 375
            LIN LC+N     AI++L ++++ G                                  
Sbjct: 361 TLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCK 420

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                            R  DAA L+ +M K  C  N  T N L++   Q  ++++AI +
Sbjct: 421 PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEM 480

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F+ M +  C+P +V+Y++LING  +      A+   + M     + D+ +Y+  + GLC 
Sbjct: 481 FELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCM 537

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           + + D A +L    + K   P+   +NILI+ LC  G V  A+++Y  M K    P++ T
Sbjct: 538 AARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFT 597

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YN L++G  + G  D AL+  + +  E   PD ISYN  LKGLC   R  DA + + + L
Sbjct: 598 YNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEML 654

Query: 601 CRGILPTTITW 611
            +   P  +T+
Sbjct: 655 RKNCTPNEVTF 665



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 246/491 (50%), Gaps = 34/491 (6%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V +   +I  L     L  A  V + +   G   + V +N L+ G+ + G    A+ +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            E      S   NVVTY  +I+G C+ GR  + L +   M       D++TY + + GLC
Sbjct: 176 LE--AARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKGLC 230

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
            A   E AE + REM+ +    + VT+   I  FC+ G +    EL E M + GC+ +VV
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+ L+ G  E+G+VD+A+   +LL    C  ++  +   + GLC               
Sbjct: 291 IYSTLVNGFSEHGRVDDAL---KLLSTMLCRPNTVCYNAALKGLCI-------------- 333

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                GR  +   L+  M +  C  N  T ++L+N   Q    E AI + ++M + G  P
Sbjct: 334 ----AGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMP 389

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VVSYNT+I+   +     +A   +  ML    KPD I+++ ++  LC++++   A +L 
Sbjct: 390 DVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELM 446

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + L++    +   +NILI  LC  G+V+DA++++  M K  C P++VTY++L++G  + 
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A +++  +     R DI SYN TLKGLC  +R  DA E + D + +  LP  +T+
Sbjct: 507 GLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTF 563

Query: 612 HILVRAVMNNG 622
           +IL+ ++   G
Sbjct: 564 NILINSLCQKG 574



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 214/445 (48%), Gaps = 35/445 (7%)

Query: 100 NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           NE+ F  +    C+    ++A   L  + + G  PDV  Y T++NG  + G +  AL + 
Sbjct: 253 NEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLL 312

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
             M  R    N VCYN  + G    G +    E+   +V +    PN  T++ +IN LC+
Sbjct: 313 STMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMVRK-DCPPNDATFSTLINSLCQ 368

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
               +  +E+ ++M+K     D  +Y + I    +    + A ++   M+      D ++
Sbjct: 369 NRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKP---DTIS 425

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +NA++   CRA +  +  EL   M ++ C  N +++NILI  L +NG+V +AI ++EL+ 
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +  C  D  T+  LING  + G    A  +   +                      C+ +
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---------------------CRAD 524

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            ++ N+ + G   A++ ++A  L  +M  K C P  V++N LIN LC+      A    +
Sbjct: 525 IFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYE 584

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSA 516
           +M + G  PD+ TY+ LING  +   +D ALK    FL      PD   YN ++ GLC A
Sbjct: 585 QMPKYGITPDIFTYNALINGYSEQGCLDDALK----FLSTMPCEPDTISYNSILKGLCRA 640

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTY 541
            + +DA +L + M ++NC PN VT+
Sbjct: 641 ERWKDAEKLVTEMLRKNCTPNEVTF 665


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 253/510 (49%), Gaps = 24/510 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD-LLGALAVFDEMFERGVE 167
           +L       +A++ L+ L   GL   V S    ++ +  + + +  A+ VF    E G+ 
Sbjct: 199 VLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGIS 255

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   YNI+I    + G    A  +  ++   +S  P+VV+Y+ +I+G C  G   + L+
Sbjct: 256 WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST-PDVVSYSTVIDGYCHLGELKKALK 314

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M+    + + +TY S I  LCK G    AE+V REM+   I  D V Y  +I GF 
Sbjct: 315 LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 288 RAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G ++   + + E++ +K   + ++Y  LI+G  + GKV E  +++  +  +    D  
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI+  CK                   G + +A SL N M + G   N  T  +L++
Sbjct: 435 TYTTLIDVYCK------------------AGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +  +L+ A  L  EM +KG    V  YN+++NG+CK     +A   +KEM   G  P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D ITY+ +I+  C+   ID A KL  + L +G  P V  +N+L++G C  G +ED  +L 
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M ++  VP+ +TYNTLM         +   +I+  +  + + PD  +YNI +KG C  
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVR 616
             + +A+    + + +G +PT  +++ L++
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIK 686



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 236/469 (50%), Gaps = 20/469 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + ++A R L  +  +   PDV SY TVI+G    G+L  AL + D+M  +G++ N
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +I    K G    A+++  R +M   + P+ V Y  +I+G  K G      + +
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVL-REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M   +   D  TY + I G  + G V   + ++ EM+  G+  D VTY  +ID +C+A
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++   F L   M + G   N+V+Y  LI GL ++G++D A  + + +R+K    +   +
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             ++NG+CK G + +AI+++ E+E  G                     +A T  ++++ +
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAG------------------IDPDAITYTTVIDAY 548

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A  L +EM  +G  PTVV++N L+NG C +    +    +  MLEKG  PD 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ L+   C    ++   K+  +   +G  PD   YNILI G C A  +++A  LY  
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           M ++  VP + +YN L+   +K     +A E++  +    L  D   YN
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 212/431 (49%), Gaps = 20/431 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN + +++    L + G   E  ++ D++          +  +F+  +  A N EG E  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI--ANNSEGIEMA 245

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RKGCLNVVSYNILIRGLLE 322
            +   E GI  +  +YN +I   CR GK+KE   L   M  R    +VVSY+ +I G   
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ +A+ + + ++ K    +  T+  +I  LCK G   +A ++L E+           
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G +  A    + M       +  T  +L+ GF Q  K+     LF EM 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +G  P  V+Y TLI+  CK      A+S   EM++ G  P+++TY  LI+GLC+  ++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +L  +  +KG   +V +YN +++G+C AG +E A++L   M+     P+ +TY T++
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D   + GD DKA ++   +L+  L+P ++++N+ + G C    + D    L   L +GI+
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 606 PTTITWHILVR 616
           P  IT++ L++
Sbjct: 606 PDAITYNTLMK 616



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 23/373 (6%)

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRK 305
           F   L + G++  A ++  +++  G+ V   + NA +    R     E  E+  +V    
Sbjct: 196 FFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEMAIKVFCEY 252

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   N  SYNI+I  L   GKV EA  +   +  ++   D  ++  +I+G C  G L KA
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           ++++++                  M   G K N YT NS++    +  K   A  + +EM
Sbjct: 313 LKLMDD------------------MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +   P  V Y TLI+G  K+     A  +  EML K   PD ITY+ LI G  Q  K+
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
                L  + + +G  PD   Y  LI   C AG++ +A  L++ M +    PN+VTY  L
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G+ D A E+ + + ++ L+ ++  YN  + G+C    +  A + + +    GI
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 605 LPTTITWHILVRA 617
            P  IT+  ++ A
Sbjct: 535 DPDAITYTTVIDA 547



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 135/352 (38%), Gaps = 93/352 (26%)

Query: 39  HLFHHILRRLIDPKLVVHVSRI--------------LELIEIQKCYCPEDVAL-SVIQAY 83
           +LFH ++ R + P  V + + I              L    +Q    P  V   ++I   
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 84  GKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
            K+   D A ++   M +        I+      +C+    E+A + +  +   G+ PD 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF-----FKKGD----- 185
            +Y TVI+   + GD+  A  +  EM +RG++  VV +N+L++GF      + GD     
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 186 ---------------YMRAKEIWERLVMETSVY---------PNVVTYNVMINGLCKCGR 221
                           M+   I   +   T +Y         P+  TYN++I G C    
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC---- 654

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                          KA N++ A  +Y+EM+E G      +YNA
Sbjct: 655 -------------------------------KARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
           +I  F +  K  E  EL+E M   G + +   YN  +    E G V+  +++
Sbjct: 684 LIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 44/230 (19%)

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSR-----KGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            + L++ +   SKLE  + + +   R     K   P  ++++     L ++    EA   
Sbjct: 153 AHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKL 212

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQ-SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           + ++L  G    + + +  ++ +   S+ I+MA+K+ C++   G + + T YNI+I+ LC
Sbjct: 213 LDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLC 269

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             GKV++A +L   M  R+  P                                   D++
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTP-----------------------------------DVV 294

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           SY+  + G C    +  A + ++D   +G+ P   T++ ++  +   G S
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKS 344


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 291/624 (46%), Gaps = 34/624 (5%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-- 78
           ALA+FD   +E G +   + ++ ++   +   +     R LEL        P     +  
Sbjct: 372 ALAVFDE-MKEKGISPEQYSYNSLISGFLKADMF---DRALELFNHMNACGPSPNGYTHV 427

Query: 79  -VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
             I  YGK+    KA+  ++ M       ++    A +  L R  +   AKR    L + 
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDM 487

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PD  +Y  +I    K+     A+  F +M E G   +V+  N LID  +K G    A
Sbjct: 488 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +++ +L  E  + P   TYN +++GL + G+  E + + + M  +    +  TY + + 
Sbjct: 548 WKLFHQL-KEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLD 606

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            L K G V  A  +   M E G   D  +YN ++ G  +  + +E F ++  M +    +
Sbjct: 607 CLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPD 666

Query: 310 VVSYNILIRGLLENGKVDEAI-SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             +   ++   ++NG + EA+ ++ E + + +CN D ++   L+ G+     + K+I+  
Sbjct: 667 YATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFA 726

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             +   G                   +  +A  L N+    G  L   + NSL+ G +  
Sbjct: 727 ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDE 786

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           + ++ A  LF EM R GC P   +YN +++ + K  R  E      EM  KG++   +TY
Sbjct: 787 NLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTY 846

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+GL +SK+++ A+ L    + +GF+P    Y  L+ GL  AGK+ DA  L++ M +
Sbjct: 847 NTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLE 906

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C PN   YN L++G    G+ +   +I+  ++E+ + PDI SY + +  LC+  R++D
Sbjct: 907 YGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLND 966

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
              +    L  G+ P  I +++L+
Sbjct: 967 GLSYFRQLLELGLEPDLIIYNLLI 990



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 286/610 (46%), Gaps = 48/610 (7%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           + ++++L++   P  AL LF +A R+P   H+    +++L  +     V  ++++ +L++
Sbjct: 76  ESVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQ 135

Query: 66  IQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNS 125
            Q           +++A          +  F  +    G + G+         A   L  
Sbjct: 136 KQ-----------IVKA---------NVGTFATVFSGVGVQGGL-------RSAPVALPV 168

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + E G+  + Y+Y  +I  LVKSG    A+ V+  M E G+  +V  Y++L+  F KK D
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228

Query: 186 YMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
                 +W    ME   V PNV +Y + I  L +  RFDE  ++  +M+ +  + D  T+
Sbjct: 229 VDTV--LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTH 286

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              I  LC AG +  A+ V+ +M  S    D VTY  ++D    +G  +   E+W  M  
Sbjct: 287 TVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVA 346

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            G   N+VSY  ++  L + G++DEA+++++ ++EK  + +  ++  LI+G  K    ++
Sbjct: 347 DGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDR 406

Query: 364 AIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           A+++ N +                   G  G+   A      M   G   +    N++++
Sbjct: 407 ALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLS 466

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              ++ +L  A  +F E+   G SP  ++Y  +I    K  +  EA +F  +M+E G  P
Sbjct: 467 SLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVP 526

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D++  + LI+ L +  K + A KL  Q  +    P    YN L+ GL   GKV++ + L 
Sbjct: 527 DVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLL 586

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M      PNL+TYNT++D L K G+ + A+ +   + E+   PD+ SYN  + GL   
Sbjct: 587 EEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKE 646

Query: 587 SRMSDAFEFL 596
            R  +AF   
Sbjct: 647 ERFEEAFRMF 656



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 257/516 (49%), Gaps = 37/516 (7%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE-MFERGVET 168
            L ++ +FE+A R    + +K L PD  +  T++   VK+G +  AL    E + +    T
Sbjct: 643  LIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNT 701

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +   ++ L++G   K    ++ E  E  +    +  N      +I  LCK  +  E  ++
Sbjct: 702  DKSSFHSLMEGILNKAGVEKSIEFAEN-IASRGILLNDFFLCPLIRHLCKHKKALEAHQL 760

Query: 229  WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            +++ K       + +Y S I GL     ++ AE ++ EM   G   D  TYN ++D   +
Sbjct: 761  FNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGK 820

Query: 289  AGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            + +I+E   +   M RKG  +  V+YN +I GL+++ ++++AI ++  L  +  +    T
Sbjct: 821  SMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCT 880

Query: 348  HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            +G L++GL K                   G++ DA +L N M ++GCK N    N L+NG
Sbjct: 881  YGPLLDGLLK------------------AGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
               A   EN   +F++M  +G +P + SY  LI+ LC   R  +  S+ +++LE G +PD
Sbjct: 923  HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +I Y+LLI+GL +S++I+ A+ L  +  +KG  P++  YN LI  L  AGK  +A Q+Y 
Sbjct: 983  LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK-----G 582
             +  +   PN+ TYN L+ G   +G  D A   +          D ++  ++LK     G
Sbjct: 1043 ELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY----------DCVAVGVSLKTALISG 1092

Query: 583  LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            L   + ++ A     +   RG  P   T+++++ A+
Sbjct: 1093 LVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAI 1128



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 286/600 (47%), Gaps = 68/600 (11%)

Query: 72   PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKR 121
            P+ +  ++ I+   K S  D+A++ F  M E  GC   +L          +  +  +A +
Sbjct: 491  PDTITYTMMIKCCSKASKADEAMNFFSDMVET-GCVPDVLALNSLIDTLYKGGKGNEAWK 549

Query: 122  FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
              + L E  ++P   +Y T+++GL + G +   + + +EM       N++ YN ++D   
Sbjct: 550  LFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLS 609

Query: 182  KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
            K G+   A  +   +  E    P++ +YN ++ GL K  RF+E   M+ +MKK     D 
Sbjct: 610  KNGEVNCAIGMLYSMT-EKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDY 667

Query: 242  FTYCSFIHGLCKAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             T C+ +    K G ++ A    +E ++++    D  +++++++G      +++  E  E
Sbjct: 668  ATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAE 727

Query: 301  VMGRKG------------------------------------CLNVVSYNILIRGLLENG 324
             +  +G                                     L   SYN LIRGL++  
Sbjct: 728  NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 787

Query: 325  KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
             +D A  ++  ++   C  D  T+ ++++ + K+  + + +++  E              
Sbjct: 788  LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAE-------------- 833

Query: 385  LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                M + G +    T N++++G +++ +LE AI L+  +  +G SPT  +Y  L++GL 
Sbjct: 834  ----MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 889

Query: 445  KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
            K  +  +A +   EMLE G KP+   Y++L+NG   +   +   ++  + +++G  PD+ 
Sbjct: 890  KAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIK 949

Query: 505  MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             Y +LI  LC+AG++ D L  +  + +    P+L+ YN L+DGL K+   ++A+ ++N +
Sbjct: 950  SYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEM 1009

Query: 565  LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             ++ + P++ +YN  +  L    + S+A +   + L +G  P   T++ L+R    +G++
Sbjct: 1010 KKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGST 1069



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 246/499 (49%), Gaps = 22/499 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L +  +F++A + L  + + G KPDV ++  VI  L  +G L  A  VF +M     + 
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           + V Y  L+D     GD     EIW  +V +     N+V+Y  +++ LC+ GR DE L +
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVAD-GYNDNIVSYTAVVDALCQVGRLDEALAV 375

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D MK+     + ++Y S I G  KA   + A  ++  M   G   +  T+   I+ + +
Sbjct: 376 FDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGK 435

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +G+  +  + +E M  KG + +V + N ++  L  +G++  A  ++  L++   + D+ T
Sbjct: 436 SGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTIT 495

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + ++I    K    ++A+   +++ E                   GC  +    NSL++ 
Sbjct: 496 YTMMIKCCSKASKADEAMNFFSDMVE------------------TGCVPDVLALNSLIDT 537

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  K   A  LF ++      PT  +YNTL++GL +  +  E    ++EM      P+
Sbjct: 538 LYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPN 597

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +ITY+ +++ L ++ +++ A+ +     +KG TPD++ YN +++GL    + E+A +++ 
Sbjct: 598 LITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFC 657

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE-IWNHILEERLRPDIISYNITLKGLCSC 586
            MKK    P+  T  T++    K G   +AL  +  +IL+     D  S++  ++G+ + 
Sbjct: 658 QMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNK 716

Query: 587 SRMSDAFEFLNDALCRGIL 605
           + +  + EF  +   RGIL
Sbjct: 717 AGVEKSIEFAENIASRGIL 735



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 239/493 (48%), Gaps = 20/493 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +K +V ++ TV +G+   G L  A      M E G+  N   YN LI    K G    A 
Sbjct: 139 VKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAM 198

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+++ +V E  + P+V TY+V++    K    D  L + + M+    + + ++Y   I  
Sbjct: 199 EVYKAMV-EDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRV 257

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLN 309
           L +A   + A ++  +M +SG   D VT+  +I   C AG++ +  ++ W++       +
Sbjct: 258 LGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPD 317

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  L+    ++G     + IW  +     N +  ++  +++ LC+ G L++A+ + +
Sbjct: 318 RVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFD 377

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E++E                   G     Y+ NSL++GF++A   + A+ LF  M+  G 
Sbjct: 378 EMKE------------------KGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 419

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP   ++   IN   K  +  +A    + M  KG  PD+   + +++ L +S ++ MA +
Sbjct: 420 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKR 479

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +    G +PD   Y ++I     A K ++A+  +S+M +  CVP+++  N+L+D L+
Sbjct: 480 VFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLY 539

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  ++A ++++ + E ++ P   +YN  L GL    ++ +    L +       P  I
Sbjct: 540 KGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLI 599

Query: 610 TWHILVRAVMNNG 622
           T++ ++  +  NG
Sbjct: 600 TYNTVLDCLSKNG 612



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 251/559 (44%), Gaps = 54/559 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A    + + EKG+ P+ YSY ++I+G +K+     AL +F+ M   G   N
Sbjct: 363 LCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPN 422

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              + + I+ + K G  ++A + +E +     + P+V   N +++ L + GR      ++
Sbjct: 423 GYTHVLFINYYGKSGQSLKAIQRYEHM-KSKGIVPDVAAANAVLSSLARSGRLGMAKRVF 481

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV------------ 277
             +K      D+ TY   I    KA   + A   + +MVE+G   D +            
Sbjct: 482 YELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKG 541

Query: 278 -----------------------TYNAMIDGFCRAGKIKECFELWEVMGRK-GCLNVVSY 313
                                  TYN ++ G  R GK+KE   L E M       N+++Y
Sbjct: 542 GKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITY 601

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N ++  L +NG+V+ AI +   + EK C  D +++  ++ GL K     +A ++  ++++
Sbjct: 602 NTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKK 661

Query: 374 GGEGRLADAASLVNRMDKHG-----------------CKLNAYTCNSLMNGFIQASKLEN 416
                 A   +++    K+G                 C  +  + +SLM G +  + +E 
Sbjct: 662 ILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEK 721

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           +I   + ++ +G          LI  LCK ++  EA+    +    G      +Y+ LI 
Sbjct: 722 SIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIR 781

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL     ID+A  L  +  + G  PD   YN+++  +  + ++E+ L++ + M ++    
Sbjct: 782 GLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYES 841

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
             VTYNT++ GL K+   ++A++++ +++ E   P   +Y   L GL    +M DA    
Sbjct: 842 TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLF 901

Query: 597 NDALCRGILPTTITWHILV 615
           N+ L  G  P    ++IL+
Sbjct: 902 NEMLEYGCKPNCTIYNILL 920



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 235/534 (44%), Gaps = 55/534 (10%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           N++   G   ++ SY  V++ L + G L  ALAVFDEM E+G+      YN LI GF K 
Sbjct: 342 NAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKA 401

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
             + RA E++  +       PN  T+ + IN   K G+  + ++ ++ MK      D   
Sbjct: 402 DMFDRALELFNHM-NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAA 460

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
             + +  L ++G +  A+RV+ E+ + G+  D +TY  MI    +A K  E    +  M 
Sbjct: 461 ANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 520

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             GC+ +V++ N LI  L + GK +EA  ++  L+E      + T+  L++GL       
Sbjct: 521 ETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGL------- 573

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                      G EG++ +   L+  M       N  T N++++   +  ++  AI +  
Sbjct: 574 -----------GREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLY 622

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAY----------------------SFVKE-- 458
            M+ KGC+P + SYNT++ GL K ERF EA+                      SFVK   
Sbjct: 623 SMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGL 682

Query: 459 -----------MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
                      +L+     D  ++  L+ G+     ++ +++       +G   +     
Sbjct: 683 MKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLC 742

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            LI  LC   K  +A QL++  K         +YN+L+ GL      D A +++  +   
Sbjct: 743 PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
              PD  +YN+ L  +    R+ +      +   +G   T +T++ ++  ++ +
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKS 856



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 27/375 (7%)

Query: 249 HGLCKAGNVEGAERVY--REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK- 305
           H  C+        RV+  R    +G   ++V +         A    E  EL+    R+ 
Sbjct: 48  HAGCRQSAPPAPARVHERRRAAGAGTGTESVVHM-----LRSAPGPAEALELFTAAARQP 102

Query: 306 -GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
                  S N ++  +  +G+V +   +++L++++   A+  T   + +G+         
Sbjct: 103 TAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGV--------- 153

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                    G +G L  A   +  M + G  LN YT N L+   +++     A+ ++K M
Sbjct: 154 ---------GVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAM 204

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G SP+V +Y+ L+    K          + EM  +G KP++ +Y++ I  L Q+ + 
Sbjct: 205 VEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARF 264

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A ++  +    G  PDV  + ++I  LC AG++ DA  ++  MK  +  P+ VTY TL
Sbjct: 265 DEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITL 324

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D    +GD    +EIWN ++ +    +I+SY   +  LC   R+ +A    ++   +GI
Sbjct: 325 LDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI 384

Query: 605 LPTTITWHILVRAVM 619
            P   +++ L+   +
Sbjct: 385 SPEQYSYNSLISGFL 399


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 263/509 (51%), Gaps = 26/509 (5%)

Query: 113 KRQFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + QF  +   L+ L E +  K     Y  +IN  V+S  L  ++  F+EM ++G      
Sbjct: 71  QSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSN 130

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           C+N L+        + +    W     E+   V  +V ++ ++I G C+ G  ++  ++ 
Sbjct: 131 CFNNLLTFVVGSSSFNQ----WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +++     +   Y + I G CK G +E A+ ++ EM + G+  +  TY  +I G  + 
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKN 246

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G  K+ FE++E M   G   N+ +YN ++  L ++G+  +A  +++ +RE+  + +  T+
Sbjct: 247 GIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTY 306

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI GLC+                  E +  +A  ++++M  +    N  T N+L++GF
Sbjct: 307 NTLIGGLCR------------------EMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               KL  A+ L +++  +G SP++V+YN L++G C+      A   VKEM E+G KP  
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY++LI+   +S  ++ A++L     + G  PDV  Y++LIHG C  G++ +A +L+ +
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M ++   PN V YNT++ G  K G   +AL ++  + E+ L P++ SY+  ++ LC   +
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRA 617
           + +A + +   +  GI P+    +++ RA
Sbjct: 529 LKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 207/419 (49%), Gaps = 25/419 (5%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            LDV+     I GC     C   + EK+   L  L E G  P+V  Y T+I+G  K G++
Sbjct: 160 VLDVYSFGIVIKGC-----CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  +F EM + G+  N   Y +LI G FK G   +  E++E++  E  V+PN+ TYN 
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEHGVFPNLYTYNC 273

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N LCK GR  +  +++D M++     +  TY + I GLC+      A +V  +M    
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYV 333

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           I  + +TYN +IDGFC  GK+ +   L   +  +G   ++V+YN+L+ G    G    A 
Sbjct: 334 INPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + + + E+       T+ +LI+   ++  +  AIQ+ + +EE G         LV    
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG---------LVP--- 441

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
                 + +T + L++GF    ++  A  LFK M  K   P  V YNT+I G CK     
Sbjct: 442 ------DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY 495

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            A    ++M EK   P++ +YS LI  LC+ +K+  A  L  + +  G  P  T+ N++
Sbjct: 496 RALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 181/354 (51%), Gaps = 19/354 (5%)

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           + +D  ++  +I G C AG+I++ F+L   +   G   NVV Y  LI G  + G++++A 
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            ++  + +    A+  T+ VLI+GL KNG   +  +                  +  +M 
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE------------------MYEKMQ 260

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +HG   N YT N +MN   +  + ++A  +F EM  +G S  +V+YNTLI GLC+  +  
Sbjct: 261 EHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA   + +M      P++ITY+ LI+G C   K+  AL LC     +G +P +  YN+L+
Sbjct: 321 EANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLV 380

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C  G    A ++   M++R   P+ VTY  L+D   ++ + + A+++ + + E  L 
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLV 440

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           PD+ +Y++ + G C   +M++A       + + + P  + ++ ++      G+S
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G +++     +  +  L   +     S  + V+IN   ++  L+ +I   NE+ + G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 376 EGRLADAASLVNRM-------------------DKHGCKLNAYTCNSLMNGFIQASKLEN 416
                  ++  N +                    K    L+ Y+   ++ G  +A ++E 
Sbjct: 125 ---FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEK 181

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           +  L  E+   G SP VV Y TLI+G CK     +A     EM + G   +  TY++LI+
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++       ++  +  + G  P++  YN +++ LC  G+ +DA +++  M++R    
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTYNTL+ GL +    ++A ++ + +    + P++I+YN  + G CS  ++  A    
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC 361

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAST 625
            D   RG+ P+ +T+++LV      G ++
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 10/271 (3%)

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K+     A  VF  M E         +    G LCR+ +  +A + ++ +    + P++ 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+I+G    G L  AL++  ++  RG+  ++V YN+L+ GF +KGD   A ++ + +
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             E  + P+ VTY ++I+   +    +  +++   M++     D  TY   IHG C  G 
Sbjct: 400 -EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           +  A R+++ MVE  +  + V YN MI G+C+ G       L+  M  K    NV SY+ 
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADST 346
           LIR L +  K+ EA  + E + +   +   T
Sbjct: 519 LIRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 271/587 (46%), Gaps = 62/587 (10%)

Query: 85  KNSMPDKAL--DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           KNSM ++ +  D       ++G      CR  + E A    + +      P V S   ++
Sbjct: 253 KNSMVERGIVADEVTYRTLVYG-----FCRTEELEMALEMTDDMLSLHFVPSVASCSFMV 307

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +GL K G +  A  +   + E G+  N+   N LID   K   +  A+ ++ R +    +
Sbjct: 308 DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF-RGMANRGL 366

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN VTY ++I+ LCK G  D+ L M+DRM++       + Y S I+G C+  N   A  
Sbjct: 367 EPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARG 426

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           +  EMVE G+   A +Y+ +I G CR G +    EL   M R G   NV ++  LI G  
Sbjct: 427 LLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFC 486

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------ 375
           ++G +DEA  +++ + + +   +  T  V+I G C+ G + KA Q+ +++ + G      
Sbjct: 487 KDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546

Query: 376 ----------------------------------------------EGRLADAASLVNRM 389
                                                         EGRL +   + + M
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G KL+  +   ++   ++    E    LF+EM  KG  P  V +  +I+   K E  
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +A +   +M+  G  P+++TY++LIN LC+S  +  A  LC + L   F P+   YN  
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  L + G++E A  L++ + +  C+ N VT+NTL+ G  K G    A+++  +  E   
Sbjct: 727 LDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGF 785

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            PD ISY+  +  LC    ++ AF+  N+ L +G+ P  + ++IL+R
Sbjct: 786 FPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 246/503 (48%), Gaps = 65/503 (12%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
           P +V  ++ I +  K  M D AL +F RM E      ++   + I   C+   F +A+  
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           LN + EKGL P   SY  +I GL + GDL  A+ +  EM   GV  NV  +  LI GF K
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+   A  ++++++ ++SV PN VT+NVMI G C+ G   +  +++D+M       D++
Sbjct: 488 DGNMDEAARLFDKMI-DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY S I  LC       A+    ++  + + +++ +   ++ GFC+ G++ E + +W+ M
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 303 GRKGC-LNVVSY----------------NILIRGLLENG-------------------KV 326
             +G  L+++S+                ++L R + E G                    +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A++ W+ +    C+ +  T+ VLIN LCK+GYL+ A QIL   EE   GR        
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA-QIL--CEEMLVGRFLP----- 718

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                     N++T N  ++      +LE A  L   +  +GC    V++NTLI G CK 
Sbjct: 719 ----------NSFTYNCFLDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKA 767

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +   A   ++   E G+ PD I+YS +IN LC+   I+ A +L  + L KG  PD+  Y
Sbjct: 768 GQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAY 827

Query: 507 NILIHGLCSAGKVEDALQLYSNM 529
           NILI      G+ +  L +YS+M
Sbjct: 828 NILIRWCNIHGEFDKGLGIYSDM 850



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 250/567 (44%), Gaps = 56/567 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L + RQF  A+   + + +     D Y Y   I    +  +L GA  +   M  +GV+ +
Sbjct: 170 LIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGS 229

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+L+ G  +    + A E+   +V E  +  + VTY  ++ G C+    +  LEM 
Sbjct: 230 AVPYNVLMYGLCRNNRVLEAVEVKNSMV-ERGIVADEVTYRTLVYGFCRTEELEMALEMT 288

Query: 230 DRMKKNEREKDSFTYCSF-IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           D M  +     S   CSF + GL K G+++ A R+   + E G+  +    NA+ID  C+
Sbjct: 289 DDM-LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCK 347

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             + +E   L+  M  +G   N V+Y ILI  L + G +D+A+ +++ +REK        
Sbjct: 348 DRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYP 407

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  LING C++   ++A  +LNE+ E G                 +G LA A  L   M 
Sbjct: 408 YNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMA 467

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           ++G   N YT  +L++GF +   ++ A  LF +M      P  V++N +I G C+V    
Sbjct: 468 RNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVR 527

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A+    +M+++G  PD  TY  LI+ LC +     A +            +      L+
Sbjct: 528 KAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLM 587

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK-------------- 556
           +G C  G++ +   ++  M+ R    +L+++  ++    K  D +K              
Sbjct: 588 YGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVK 647

Query: 557 ---------------------ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
                                AL  W+ ++ +   P++++Y + +  LC    +S A   
Sbjct: 648 PDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQIL 707

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
             + L    LP + T++  +  + N G
Sbjct: 708 CEEMLVGRFLPNSFTYNCFLDFLANEG 734



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 230/510 (45%), Gaps = 22/510 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R R+   A   L      G+    Y+   ++  L+K      A  +FDEM +     +  
Sbjct: 137 RLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEY 196

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            Y   I  + +  +   A+ +  R  ME+  V  + V YNV++ GLC+  R  E +E+ +
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTR--MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKN 254

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +     D  TY + ++G C+   +E A  +  +M+         + + M+DG  + G
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG 314

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            I + F L   +G  G + N+ + N LI  L ++ +  EA  ++  +  +    +  T+ 
Sbjct: 315 HIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYA 374

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI+ LCK G ++                  DA  + +RM + G ++  Y  NSL+NG+ 
Sbjct: 375 ILIHSLCKRGMMD------------------DALCMFDRMREKGIRVTVYPYNSLINGYC 416

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q      A  L  EM  KG +P+  SY+ LI GLC+      A    +EM   G   ++ 
Sbjct: 417 QHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVY 476

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T++ LI+G C+   +D A +L  + +     P+   +N++I G C  G V  A QLY  M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             R   P+  TY +L+  L  T    KA E  + +    +  +  S    + G C   R+
Sbjct: 537 VDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRL 596

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++ +   ++   RG+    I++ ++V A +
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAAL 626



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 12/316 (3%)

Query: 66  IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQF 116
           I     P +V  +V I+ Y +     KA  ++ +M        N  +     +LC     
Sbjct: 502 IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGA 561

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            KAK F++ L    +  + +S  T++ G  K G L     ++DEM  RGV+ +++ + ++
Sbjct: 562 MKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVI 621

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +    K  D  +   ++ R + E  V P+ V +  MI+   K     + L  WD+M  + 
Sbjct: 622 VYAALKLHDGEKISVLF-REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADG 680

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              +  TY   I+ LCK+G +  A+ +  EM+      ++ TYN  +D     G++++  
Sbjct: 681 CSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAK 740

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L   +  +GCL N V++N LI+G  + G++  AI + +   E     D  ++  +IN L
Sbjct: 741 VLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINEL 799

Query: 356 CKNGYLNKAIQILNEV 371
           CK G +NKA Q+ NE+
Sbjct: 800 CKVGDINKAFQLWNEM 815



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 35/252 (13%)

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           + +++  +  +A  + +     G +    + + ++  L K+ +F  A     EM++  + 
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D   Y+  I   C+ + +D A  L  +   KG       YN+L++GLC   +V +A+++
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 526 YSNMKKRNCVPNLVTYNTL-----------------------------------MDGLFK 550
            ++M +R  V + VTY TL                                   +DGL K
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  DKA  +  H+ E  + P++ + N  +  LC   R  +A         RG+ P  +T
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 611 WHILVRAVMNNG 622
           + IL+ ++   G
Sbjct: 373 YAILIHSLCKRG 384


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 257/509 (50%), Gaps = 40/509 (7%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            ++A      LW     P + +   V++GLVK+     A  +FDEM  RG+  +VV YN 
Sbjct: 127 LDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNT 183

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI+    +G   +A+E+W+++V    + PNV+TY  MI  LC+ G   +   ++D MK+ 
Sbjct: 184 LINACRYQGAVAKAQEMWDQMVAR-QIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEA 242

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               + +TY   + G C+  +V  A  +Y+E++ SG+  +AV +  +IDGFC+A +  E 
Sbjct: 243 GMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEA 302

Query: 296 FELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            +++  M R G    V  YN L+ G   +G   EA+S+++ +       D  T  +++ G
Sbjct: 303 KDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRG 362

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC  G +  A + L  V E                   G  LNA   N+L++ + +   L
Sbjct: 363 LCDGGQIQVAARFLEGVRE------------------DGVNLNAAAYNALIDEYCRNGNL 404

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A+     M+  G  P VVSY++LI+G  K+ +   A +   EM+ KG +P+++TY+ L
Sbjct: 405 EEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTAL 464

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL--------Y 526
           I+G  ++  ID A +   + ++ G +P+    ++L+ GLC   +V+DA++         Y
Sbjct: 465 IHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKY 524

Query: 527 SNM---------KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           S++         ++   +PN   Y TL+ GL+  G   +A ++++++ +  +  D  +Y 
Sbjct: 525 SDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYT 584

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           + ++G C    + +A     D +  G+ P
Sbjct: 585 LLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 201/418 (48%), Gaps = 25/418 (5%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVE 258
           TS  P      V++  L + G  DE L ++ R+        +   C + + GL KA    
Sbjct: 106 TSASP-APALGVLVIALSQMGLLDEALYVFRRLWT----LPALPACNAVLDGLVKARRSR 160

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILI 317
            A  ++ EM+  G+    VTYN +I+     G + +  E+W+ M  R+   NV++Y  +I
Sbjct: 161 CAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMI 220

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
             L E G + +A  +++ ++E     +  T+ VL++G C+   +N A  +  E       
Sbjct: 221 CVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQE------- 273

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                  L+N     G   NA    +L++GF +A +   A  +F++M R G +PTV  YN
Sbjct: 274 -------LLN----SGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYN 322

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           +L++G  +     EA S  +EM   G  PD  T S+++ GLC   +I +A +      + 
Sbjct: 323 SLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRED 382

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   +   YN LI   C  G +E+AL   + M +    PN+V+Y++L+DG  K G    A
Sbjct: 383 GVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIA 442

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + I+  ++ + + P++++Y   + G      +  AF F  + +  GI P  IT  +LV
Sbjct: 443 MAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLV 500



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 42/431 (9%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC +     A+R  +++ E G++P+ Y+Y  +++G  +  D+  A  ++ E+   G+  
Sbjct: 222 VLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIP 281

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V +  LIDGF K   +  AK+++ R +    V P V  YN +++G  + G   E L +
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMF-RDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSL 340

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D FT    + GLC  G ++ A R    + E G+ ++A  YNA+ID +CR
Sbjct: 341 YQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCR 400

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G ++E       M   G   NVVSY+ LI G  + GK+  A++I+  +  K    +  T
Sbjct: 401 NGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVT 460

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI+G  KNG ++ A +   E                  M ++G   NA T + L++G
Sbjct: 461 YTALIHGHAKNGGIDAAFRFHKE------------------MIENGISPNAITVSVLVDG 502

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML--EKGWK 465
             + +++++A+    E S                G+    ++ + +SF       E+   
Sbjct: 503 LCRENRVQDAVRFVMEHS----------------GI----KYSDIHSFFSNFTTEEEPLI 542

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P+   Y  LI GL    +   A KL     + G   D   Y +LI G C  G V +A+ L
Sbjct: 543 PNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMML 602

Query: 526 YSNMKKRNCVP 536
           Y++M K    P
Sbjct: 603 YADMMKIGVKP 613



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 169/345 (48%), Gaps = 19/345 (5%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           NA++DG  +A + +  +EL++ M R+G + +VV+YN LI      G V +A  +W+ +  
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +  + +  T+  +I  LC+                  EG + DA  L + M + G + N 
Sbjct: 207 RQIDPNVITYTSMICVLCE------------------EGCIGDAERLFDAMKEAGMRPNQ 248

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           YT N LM+G  Q   + +A  L++E+   G  P  V + TLI+G CK +RF EA    ++
Sbjct: 249 YTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRD 308

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  P +  Y+ L++G  +S     AL L  +  + G  PD    +I++ GLC  G+
Sbjct: 309 MPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQ 368

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ A +    +++     N   YN L+D   + G+ ++AL     + E  + P+++SY+ 
Sbjct: 369 IQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSS 428

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            + G     +M  A     + + +GI P  +T+  L+     NG 
Sbjct: 429 LIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 473



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 56/309 (18%)

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           GVL+  L + G L++A+ +          RL    +L               CN++++G 
Sbjct: 115 GVLVIALSQMGLLDEALYVFR--------RLWTLPALP-------------ACNAVLDGL 153

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLING-------------------------- 442
           ++A +   A  LF EM R+G  P+VV+YNTLIN                           
Sbjct: 154 VKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNV 213

Query: 443 ---------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
                    LC+    G+A      M E G +P+  TY++L++G CQ   ++ A  L  +
Sbjct: 214 ITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQE 273

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L  G  P+  ++  LI G C A +  +A  ++ +M +    P +  YN+LMDG F++GD
Sbjct: 274 LLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGD 333

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL ++  +    L PD  + +I ++GLC   ++  A  FL      G+      ++ 
Sbjct: 334 AQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNA 393

Query: 614 LVRAVMNNG 622
           L+     NG
Sbjct: 394 LIDEYCRNG 402


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 245/500 (49%), Gaps = 22/500 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + EK   FL+ + EKG+ PD+ +Y T+I+     G +  A  + + M  +G    
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN +I+G  K G Y RAKE++  + + + + P+  TY  ++   CK G   E  +++
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+  +   D   + S +    ++GN++ A   +  + E+G+  D V Y  +I G+CR 
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I     L   M ++GC ++VV+YN ++ GL +   + EA  ++  + E+    DS T 
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+G CK G L  A++                  L  +M +   +L+  T N+L++GF
Sbjct: 484 TILIDGHCKLGNLQNAME------------------LFQKMKEKRIRLDVVTYNTLLDGF 525

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A  ++ +M  K   PT +SY+ L+N LC      EA+    EM+ K  KP +
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +  + +I G C+S           + + +GF PD   YN LI+G      +  A  L   
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645

Query: 529 MKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           M++     VP++ TYN+++ G  +     +A  +   ++E  + PD  +Y   + G  S 
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705

Query: 587 SRMSDAFEFLNDALCRGILP 606
             +++AF   ++ L RG  P
Sbjct: 706 DNLTEAFRIHDEMLQRGFSP 725



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 252/524 (48%), Gaps = 21/524 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + R+  +A      L  KG    + +   +I  LV+ G +  A  V+ E+   GV  NV 
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NI+++   K G   +      + V E  VYP++VTYN +I+     G  +E  E+ + 
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M         +TY + I+GLCK G  E A+ V+ EM+ SG+  D+ TY +++   C+ G 
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355

Query: 292 IKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E  +++  M  R    ++V ++ ++     +G +D+A+  +  ++E     D+  + +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI G C+ G ++ A+ + NE+ + G                    L +A  L N M +  
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              ++YT   L++G  +   L+NA+ LF++M  K     VV+YNTL++G  KV     A 
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
               +M+ K   P  I+YS+L+N LC    +  A ++  + + K   P V + N +I G 
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER--LRP 571
           C +G   D       M     VP+ ++YNTL+ G  +  +  KA  +   + EE+  L P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           D+ +YN  L G C  ++M +A   L   + RG+ P   T+  ++
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 227/454 (50%), Gaps = 31/454 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I AY    + ++A ++   M    G   G+         LC+  ++E+AK     +  
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GL PD  +Y +++    K GD++    VF +M  R V  ++VC++ ++  F + G+  +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++   V E  + P+ V Y ++I G C+ G     + + + M +     D  TY + +
Sbjct: 394 AL-MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           HGLCK   +  A++++ EM E  +F D+ T   +IDG C+ G ++   EL++ M  K   
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           L+VV+YN L+ G  + G +D A  IW  +  K       ++ +L+N LC  G+L +A ++
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
            +E+                      G  +D  S + +M   G   +  + N+L+ GF++
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632

Query: 411 ASKLENAIFLFKEMSRK--GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              +  A  L K+M  +  G  P V +YN++++G C+  +  EA   +++M+E+G  PD 
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            TY+ +ING      +  A ++  + LQ+GF+PD
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 254/547 (46%), Gaps = 38/547 (6%)

Query: 98  RMNEIFGCEAGILCRKRQFEKAKRFLNSL--WEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           R+N +   E    CR       +RF++ L       K    S   +I+ LV+SG L  A 
Sbjct: 75  RLNPLAVVEVLYRCRN-DLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQ 133

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGD-----------YMRAKEIWE-----RLVME 199
           +    M  R   + +   N L   F   G            Y++A+++ E      L+  
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
                ++   N +I  L + G  +    ++  + ++    + +T    ++ LCK G +E 
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
                 ++ E G++ D VTYN +I  +   G ++E FEL   M  KG    V +YN +I 
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL ++GK + A  ++  +     + DSTT+  L+   CK                  +G 
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK------------------KGD 355

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           + +   + + M       +    +S+M+ F ++  L+ A+  F  +   G  P  V Y  
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI G C+      A +   EML++G   D++TY+ +++GLC+ K +  A KL  +  ++ 
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD     ILI G C  G +++A++L+  MK++    ++VTYNTL+DG  K GD D A 
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           EIW  ++ + + P  ISY+I +  LCS   +++AF   ++ + + I PT +  + +++  
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595

Query: 619 MNNGAST 625
             +G ++
Sbjct: 596 CRSGNAS 602


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 247/518 (47%), Gaps = 23/518 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ D      ++ G  ++     AL +      E G   +V
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVME--TSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             YNIL+     +G   +A ++  R++ E  T   P+VV YN +I+G  K G  ++  ++
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D  TY S +H LCKA  ++ AE   R+MV  G+  D  TYN +I G+  
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G+ KE   +++ M R+  L +VV+ N L+  L + GK+ EA  +++ +  K  N D  +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +++NG     Y  K             G L D   L + M   G   + YT N L+  
Sbjct: 364 YTIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +     L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y  LI G C    +  A +L  + +  G   D+  +  +I+ LC  G+V DA  ++ 
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
                   P+ V YN LMDG    G  +KAL +++ ++   + P+++ Y   + G C   
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           R+ +      + L +GI P+TI ++I++  +   G + 
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 268/573 (46%), Gaps = 61/573 (10%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA     KR  E     L+   E G  PDV+SY  ++  L   G    A  +   M E 
Sbjct: 159 CEA-----KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213

Query: 165 GV--ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G     +VV YN +IDGFFK+GD  +A ++++ +V +  + P++VTY+ +++ LCK    
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV-QRGIPPDLVTYSSVVHALCKARAM 272

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+      +M       D++TY + I+G    G  + A RV++EM    I  D V  N +
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 283 IDGFCRAGKIKECFELWEVMG-------------------RKGCL--------------- 308
           +   C+ GKIKE  ++++ M                     KGCL               
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 309 --NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ ++N+LI+     G +D+A+ I+  +R+        T+  +I  LC+ G ++ A++
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             N++ + G                  G L  A  L++ +  +G +L+     S++N   
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++ +A  +F      G  P  V YN L++G C V +  +A      M+  G +P+++
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 572

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+NG C+  +ID  L L  + LQKG  P   +YNI+I GL  AG+   A   +  M
Sbjct: 573 GYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 632

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +     N  TY+ ++ GLFK    D+A+ ++  +    ++ DII+ N  + G+    R+
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 692

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A +        G++P  +T+ I++  ++  G
Sbjct: 693 EEAKDLFASISRSGLVPCAVTYSIMITNLLKEG 725



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 282/603 (46%), Gaps = 32/603 (5%)

Query: 30  REPGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL--SVIQAYGK 85
           R P     P +F +  +L+ L +         +L ++      C  DV    +VI  + K
Sbjct: 174 RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233

Query: 86  NSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
               +KA D+F+ M +         +      LC+ R  +KA+ FL  +  KG+ PD ++
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I G   +G    A+ VF EM  + +  +VV  N L+    K G    A+++++ + 
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M+    P+V +Y +M+NG    G   +  +++D M  +    D +T+   I      G +
Sbjct: 354 MKGQ-NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 412

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
           + A  ++ EM + G+    VTY  +I   CR GK+ +  E +  M  +G + +  +Y+ L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I+G   +G + +A  +   +       D    G +IN LCK                   
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK------------------L 514

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR+ DA ++ +     G   +A   N LM+G+    K+E A+ +F  M   G  P VV Y
Sbjct: 515 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            TL+NG CK+ R  E  S  +EML+KG KP  I Y+++I+GL ++ +   A     +  +
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G   +   Y+I++ GL      ++A+ L+  ++  N   +++T NT++ G+F+T   ++
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A +++  I    L P  ++Y+I +  L     + +A +  +     G  P +   + +VR
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754

Query: 617 AVM 619
            ++
Sbjct: 755 ELL 757



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 239/562 (42%), Gaps = 77/562 (13%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIE--------------IQKCYCPEDVALS-VIQAYG 84
           LF  +++R I P LV + S +  L +              + K   P++   + +I  Y 
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                 +A+ VF+ M                G LC+  + ++A+   +++  KG  PDV+
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++NG    G L+    +FD M   G+  ++  +N+LI  +   G   +A  I+  +
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG------ 250
             +  V P+VVTY  +I  LC+ G+ D+ +E +++M       D + Y   I G      
Sbjct: 423 -RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 251 -----------------------------LCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                        LCK G V  A+ ++   V  G+  DAV YN 
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG+C  GK+++   +++ M   G   NVV Y  L+ G  + G++DE +S++  + +K 
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAAS 384
               +  + ++I+GL + G    A    +E+ E G                + R  D A 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 385 -LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L   +     K++  T N+++ G  Q  ++E A  LF  +SR G  P  V+Y+ +I  L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            K     EA      M   G +PD    + ++  L +  +I  A     +  ++ F+ + 
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 781

Query: 504 TMYNILIHGLCSAGKVEDALQL 525
               +L+    S G   + ++ 
Sbjct: 782 LTAMLLVDLFSSKGTCREQIRF 803



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S+TY   +    +A   E A   + +++ +G+ VDA+  + ++ GFC A +  E  + L 
Sbjct: 113 SYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SYNIL++ L   GK  +A  +  ++ E    C+ D   +  +I+G  
Sbjct: 173 HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T +S+++   +A  ++ 
Sbjct: 233 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYSSVVHALCKARAMDK 274

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  KG  P   +YN LI G     ++ EA    KEM  +   PD++  + L+ 
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  Y I+++G  + G + D   L+  M      P
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++ T+N L+      G  DKA+ I+N + +  ++P +++Y   +  LC   +M DA E  
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G++P    +H L++    +G+
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGS 481


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 274/550 (49%), Gaps = 35/550 (6%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI--EIQKCYCPEDVALSV 79
           L LF    R   +A   ++   I+    D  L  +V RI+  I  E  +    E     +
Sbjct: 68  LILFSRLYRARKFAEMKNVLKFIVN---DGNLWSNVERIVSSIGGEFNEPSIVEKFCDML 124

Query: 80  IQAYGKNSMPDKALDVF----QRMNEI--FGCEAGILCRKRQ--FEKAKRFLNSLWEKGL 131
            + Y  N M D +L+VF    ++  EI    C   +L  KR    E    FL  + + G+
Sbjct: 125 FRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGI 184

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +  V S+  V++GL K G+++ A A+ DE+  +G + +V+ YN L++G+ +  D     E
Sbjct: 185 EIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNE 244

Query: 192 IWERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           I    +ME +V   NV TY ++I    +  + +E  +++D M K   E D + Y S I+ 
Sbjct: 245 ILS--LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINW 302

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            CK GN++ A  ++ EM E  +  +A TY A+I+G C+AG++K    +   M  KG  +N
Sbjct: 303 NCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVN 362

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V +N L+ G  + G +DEA+ +  ++++K    D+ T  ++ +G C++           
Sbjct: 363 RVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRS----------- 411

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   R  +A  L+  M++ G   N  + + L++ + +      A  LFK M +KG 
Sbjct: 412 -------NRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 464

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P+VV+YN  I   CK  +  EAY  + EM E+G  PD  TY+ LI+G   S  +D AL+
Sbjct: 465 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 524

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +  Q G   +V  Y ++I GL   G+ ++A +LY  M K   VP+   Y++L+  L 
Sbjct: 525 LFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 584

Query: 550 KTGDCDKALE 559
           K G     LE
Sbjct: 585 KVGPLVSGLE 594



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/601 (26%), Positives = 292/601 (48%), Gaps = 38/601 (6%)

Query: 7   RLLNLLKAEKNPHTA--LALFDSATREPGYAHSPHLFHHIL--RRLIDPKLVVHVSRILE 62
           R++ L+ ++ N  T   L  FD   + P  +  P L  H++   RL   +    +  +L+
Sbjct: 31  RVMQLVLSDPNLPTRSCLRFFDFLRQNP--SRKPDLPAHLILFSRLYRARKFAEMKNVLK 88

Query: 63  LI--EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
            I  +       E +  S+   + + S+ +K  D+  R          +    R F+ + 
Sbjct: 89  FIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFR----------VYMDNRMFDSSL 138

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              +   +KG + D  S    +  L +SG++   +    +M + G+E  V  +  ++DG 
Sbjct: 139 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 198

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            KKG+ +RAK + + LV +    P+V+TYN ++NG  +        E+   M+KN  + +
Sbjct: 199 CKKGEVVRAKALMDELVCK-GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYN 257

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   I    ++  +E AE+++ EM++ GI  D   Y ++I+  C+ G +K  F L++
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317

Query: 301 VMG-RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  R+   N  +Y  LI G  + G++  A  +   ++ K  + +      L++G CK G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +++A++                  L N M + G +++A+TCN + +GF ++++ E A  
Sbjct: 378 MIDEALR------------------LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 419

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L   M  +G +P VVS++ LI+  CK + F EA    K M +KG  P ++TY+  I   C
Sbjct: 420 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 479

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  K++ A KL  +  ++G  PD   Y  LI G  ++G V+ AL+L++ M +     N+V
Sbjct: 480 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 539

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY  ++ GL K G  D+A ++++ + +E + PD   Y+  +  L     +    E + D 
Sbjct: 540 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDR 599

Query: 600 L 600
           +
Sbjct: 600 I 600



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 217/454 (47%), Gaps = 53/454 (11%)

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           FD  LE++D  +K   E D  +   F+  L ++GN+E      R+MV+SGI +   ++ A
Sbjct: 134 FDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 193

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE------------------ 322
           ++DG C+ G++     L + +  KG   +V++YN L+ G +E                  
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253

Query: 323 -----------------NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
                            + K++EA  +++ + +K    D   +  +IN  CK G + +A 
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313

Query: 366 QILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            + +E+ E                    G +  A  +VN M   G  +N    N+LM+G+
Sbjct: 314 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L   M +KG      + N + +G C+  R  EA   +  M E+G  P++
Sbjct: 374 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +++S+LI+  C+ +    A +L     +KG  P V  YN  I   C  GK+E+A +L + 
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++R  +P+  TY +L+DG   +G+ D+ALE++N + +  L  ++++Y + + GL    R
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +AF+  ++    GI+P    +  L+ ++   G
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 245/465 (52%), Gaps = 22/465 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G +P + +  +++NG      +  A+A+ D+M E G   +
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + +  LI G F       A  + +R+V +    PN+VTY V++NGLCK G  D    + 
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M+  + E +   Y + I  LCK  + + A  ++ EM   G+  + +TY+++I   C  
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +  +   L  +++ RK   NVV++N LI   ++ GK+ EA  +++ + +++ + D  T+
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C +                   RL +A  +   M    C  N  T N+L+NGF
Sbjct: 369 SSLINGFCMHD------------------RLDEAKHMFELMISKDCFPNVVTYNTLINGF 410

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A +++  + LF+EMS++G     V+Y TLI+G  +      A    K+M+  G  P++
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +TY+ L++GLC++ K++ A+ +  ++LQ+    P +  YNI+I G+C AGKVED   L+ 
Sbjct: 471 MTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           ++  +   P+++ YNT++ G  + G  ++A  ++  + E+   PD
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 247/491 (50%), Gaps = 20/491 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P ++ +  +++ + K       +++ ++M   G+  N+  YNILI+ F ++     A  +
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT + ++NG C   R  + + + D+M +     D+ T+ + IHGL 
Sbjct: 143 LGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVV 311
                  A  +   MV+ G   + VTY  +++G C+ G I   F L   M   K   NVV
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            Y+ +I  L +    D+A++++  +  K    +  T+  LI+ LC               
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN-------------- 307

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 R +DA+ L++ M +     N  T N+L++ F++  KL  A  L+ EM ++   P
Sbjct: 308 ----YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            + +Y++LING C  +R  EA    + M+ K   P+++TY+ LING C++K+ID  ++L 
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  Q+G   +   Y  LIHG   A   ++A  ++  M      PN++TYNTL+DGL K 
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  +KA+ ++ ++   ++ P I +YNI ++G+C   ++ D ++       +G+ P  I +
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543

Query: 612 HILVRAVMNNG 622
           + ++      G
Sbjct: 544 NTMISGFCRKG 554



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVV----- 55
           +VIS    +  L    N +T   L +   R    + +  L   +++   +P +V      
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 56  ----HVSRILELIE-----IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGC 105
               H  RI + +      ++  Y P+ +  + +I     ++   +A+ +  RM +  GC
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGC 221

Query: 106 EAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           +  +         LC++   + A   LN +    ++ +V  Y TVI+ L K      AL 
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +F EM  +GV  NV+ Y+ LI        +  A  +   ++ E  + PNVVT+N +I+  
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERKINPNVVTFNALIDAF 340

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            K G+  E  +++D M K   + D FTY S I+G C    ++ A+ ++  M+    F + 
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTYN +I+GFC+A +I E  EL+  M ++G + N V+Y  LI G  +    D A  +++ 
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +     + +  T+  L++GLCKNG L KA+ +   ++              ++M+     
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-------------SKMEP---- 503

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
              YT N ++ G  +A K+E+   LF  +S KG  P V+ YNT+I+G C+     EA + 
Sbjct: 504 -TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562

Query: 456 VKEMLEKGWKPD 467
            ++M E G  PD
Sbjct: 563 FRKMREDGPLPD 574



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 45/314 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +VI +  K    D AL++F  M           +      LC   ++  A R L+ + E+
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+V ++  +I+  VK G L+ A  ++DEM +R ++ ++  Y+ LI+GF        A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K ++E L++    +PNVVTYN +ING CK  R DE +E++  M +     ++ TY + IH
Sbjct: 385 KHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR----- 304
           G  +A + + A+ V+++MV  G+  + +TYN ++DG C+ GK+++   ++E + R     
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503

Query: 305 ------------------------------KGC-LNVVSYNILIRGLLENGKVDEAISIW 333
                                         KG   +V+ YN +I G    G  +EA +++
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563

Query: 334 ELLREKNCNADSTT 347
             +RE     DS T
Sbjct: 564 RKMREDGPLPDSGT 577



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 16/277 (5%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL ++++ + NP+  T  AL D+  +E     +  L+  +++R IDP +  + S I 
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI- 372

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                   +C  D        +      D   +V      I G      C+ ++ ++   
Sbjct: 373 ------NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING-----FCKAKRIDEGVE 421

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               + ++GL  +  +Y T+I+G  ++ D   A  VF +M   GV  N++ YN L+DG  
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K G   +A  ++E L   + + P + TYN+MI G+CK G+ ++  +++  +     + D 
Sbjct: 482 KNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             Y + I G C+ G  E A+ ++R+M E G   D+ T
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 262/542 (48%), Gaps = 28/542 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D+AL  F RM  +        F      +   + +         +   G+  DVY+   V
Sbjct: 56  DEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIV 115

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN       +    +V  ++F+ G + +   +  LI G   +G    A  +++++V E  
Sbjct: 116 INSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE-G 174

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             PN VTY  +I+GLCK G     + +   M +   E +  TY + I  L K   V  A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            ++ EM+  GI  +  TYN++I G C+  + K    L  E++  K   NVV +  L+  L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G V  A  + +++ ++    D  T+  L++G C    +++A ++ +           
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT---------- 344

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M + GC  N  + ++L+NG+ +  +++ A++LF+EM ++   P +V+YNTLI
Sbjct: 345 --------MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI 396

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC V R  +A +   EM+  G  PD++TY +L++ LC+++ +D A+ +          
Sbjct: 397 HGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLA 456

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+  YNI+I G+C  G++E A  L+S++  +   P++ TY  +++GL   G   +A ++
Sbjct: 457 PDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           +  +  +   PD  +YN+  +G    +    A + L + L RG      T  ++V  + +
Sbjct: 517 FREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSD 576

Query: 621 NG 622
           +G
Sbjct: 577 DG 578



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 247/523 (47%), Gaps = 31/523 (5%)

Query: 51  PKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL 110
           P  VV  ++IL  I   K Y      LS+ +      +P     +   +N          
Sbjct: 71  PPSVVDFAKILTSIANMKHY---STVLSLSKQMDSLGIPSDVYTLAIVINS--------F 119

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + +     L  +++ G +PD  ++ T+I GL   G +  AL +FD+M   G + N 
Sbjct: 120 CHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNG 179

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI G  K G+   A  +   +V + +  PNV+TYN +I+ L K  + +E L ++ 
Sbjct: 180 VTYGTLIHGLCKVGNSRAAIRLLRSMV-QKNCEPNVITYNTIIDCLFKDRQVNEALNIFS 238

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       +  TY S IHGLCK    +    +  EMV+S I  + V +  ++D  C+ G
Sbjct: 239 EMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG 298

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    ++ +VM ++G   +VV+Y  L+ G     ++DEA  +++ +  K C  +  ++ 
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS 358

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LING CK   ++KA+ +  E                  M +     N  T N+L++G  
Sbjct: 359 TLINGYCKIQRIDKAMYLFEE------------------MCQRELVPNIVTYNTLIHGLC 400

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              +L +AI LF EM   G  P +V+Y  L++ LCK     +A + +K +      PD+ 
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQ 460

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y+++I+G+C+  +++ A  L      KG  PDV  Y I+I+GLC  G + +A +L+  M
Sbjct: 461 SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
               C P+  TYN +  G  +  +   A+++   +L      D
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSAD 563



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 219/434 (50%), Gaps = 19/434 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A    + +  +G +P+  +YGT+I+GL K G+   A+ +   M ++  E N
Sbjct: 154 LCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPN 213

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN +ID  FK      A  I+  ++ +  + PNV TYN +I+GLCK   +     + 
Sbjct: 214 VITYNTIIDCLFKDRQVNEALNIFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLM 272

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M  ++   +   + + +  LCK G V  A  V   M++ G+  D VTY A++DG C  
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E  ++++ M RKGC  NV+SY+ LI G  +  ++D+A+ ++E + ++    +  T+
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
             LI+GLC  G L  AI + +E+   G+                   L  A +++  ++ 
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                +  + N +++G  +  +LE A  LF  +S KG  P V +Y  +INGLC      E
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    +EM   G  PD  TY+L+  G  ++ +   A++L  + L +GF+ D +   +++ 
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 512 GLCSAGKVEDALQL 525
            L   G  +   Q+
Sbjct: 573 MLSDDGLDQSVKQI 586



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 13/379 (3%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI+   +++ L  ++  + AL +F S     G + +   ++ I+  L       HV+ ++
Sbjct: 214 VITYNTIIDCLFKDRQVNEALNIF-SEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLM 272

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CR 112
             +   K      +  +++ A  K  M   A DV   M +  G E  ++         C 
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQ-RGVEPDVVTYTALMDGHCL 331

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           + + ++A +  +++  KG  P+V SY T+ING  K   +  A+ +F+EM +R +  N+V 
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI G    G    A  ++  +V    + P++VTY ++++ LCK    D+ + M   +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQI-PDLVTYRILLDYLCKTRHLDQAMAMLKAI 450

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           + +    D  +Y   I G+C+ G +E A  ++  +   G+  D  TY  MI+G C  G +
Sbjct: 451 EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLL 510

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E  +L+  M   GC  +  +YN++ RG L N +   AI + + +  +  +AD++T  ++
Sbjct: 511 AEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLI 570

Query: 352 INGLCKNGYLNKAIQILNE 370
           +  L  +G      QIL+E
Sbjct: 571 VEMLSDDGLDQSVKQILHE 589



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%)

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A S  NRM       +      ++            + L K+M   G    V +   +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N  C + R    +S + ++ + G +PD  T++ LI GLC   KI  AL L  + + +GF 
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   Y  LIHGLC  G    A++L  +M ++NC PN++TYNT++D LFK    ++AL I
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ ++ + + P++ +YN  + GLC  S        +N+ +   I+P  + +  LV A+  
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 621 NGAST 625
            G  T
Sbjct: 297 EGMVT 301


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 237/500 (47%), Gaps = 34/500 (6%)

Query: 132 KPDVYSYGTV---INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KP   S G     + GLV+ G+L GAL +   +   G +  V+  NILI      G    
Sbjct: 55  KPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVAD 114

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A    ER+V        ++TYN M+NG C+ G  D    M D +       D+FTY   I
Sbjct: 115 A----ERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLI 167

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
             LC  G V  A  V+ +M+  G     VTY+ ++D  C+    K+   L + M  KGC 
Sbjct: 168 RALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE 227

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN+LI  +   G V EA+ +   L    C  D+ T+  ++  LC +         
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSE-------- 279

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                     R  +A  L+ +M  + C  +  T N+++    Q   +  A  +  +MS  
Sbjct: 280 ----------RWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH 329

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKE----MLEKGWKPDMITYSLLINGLCQSKK 483
           GC+P +++Y+++++GLCK  R  EA   +KE    M+ K   PD +T++ +I  LCQ   
Sbjct: 330 GCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL 389

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHG-LCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            D A+K+  +  + G  PD+T YN ++ G LC + K E+AL L + M      P+  TY 
Sbjct: 390 FDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYK 449

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L  GL +  + ++A+ ++  +    L PD + YN  L GLC   R   A +F    +  
Sbjct: 450 SLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSN 509

Query: 603 GILPTTITWHILVRAVMNNG 622
           G +P   T+ ILV  +   G
Sbjct: 510 GCMPDESTYIILVEGIAYEG 529



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEA----------GILCRKRQFEKAK 120
           P+ V   ++I +  +  + D+A+ V   M+E  GC            G LC+  + E+A 
Sbjct: 372 PDQVTFNTIITSLCQKGLFDRAIKVVDEMSE-HGCIPDITTYNCIVDGFLCKSCKTEEAL 430

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
             LN +   GL PD  +Y ++  GL +  ++  A+ +F  +   G+  + + YN ++ G 
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            KK     A + +  +V      P+  TY +++ G+   G  +E  E+
Sbjct: 491 CKKWRTDLAIDFFAYMV-SNGCMPDESTYIILVEGIAYEGFLEEAKEL 537


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 262/509 (51%), Gaps = 26/509 (5%)

Query: 113 KRQFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           + QF  +   L+ L E +  K     Y  +IN  V+S  L  ++  F+EM ++G      
Sbjct: 71  QSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSN 130

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETS--VYPNVVTYNVMINGLCKCGRFDECLEMW 229
           C+N L+        + +    W     E+   V  +V ++ ++I G C+ G  ++  ++ 
Sbjct: 131 CFNNLLTFVVGSSSFNQ----WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +++     +   Y + I G CK G +E A+ ++ EM + G+  +  TY  +I G  + 
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKN 246

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G  K+ FE++E M   G   N+ +YN ++  L ++G+  +A  +++ +RE+  + +  T+
Sbjct: 247 GIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTY 306

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI GLC+    N+A    NEV              +++M   G   N  T N+L++GF
Sbjct: 307 NTLIGGLCREMKANEA----NEV--------------MDQMKSDGINPNLITYNTLIDGF 348

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               KL  A+ L +++  +G SP++V+YN L++G CK      A   VKEM E+G KP  
Sbjct: 349 CGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY++LI+   +S  ++ A++L     + G TPDV  Y++LIHG C  G++ +A +L+ +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M ++   PN V YNT++ G  K G   +AL ++  + E+ L P++ SY   ++ LC   +
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRA 617
             +A   +   +  GI P+    +++ RA
Sbjct: 529 SKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 204/419 (48%), Gaps = 25/419 (5%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
            LDV+     I GC     C   + EK+   L  L E G  P+V  Y T+I+G  K G++
Sbjct: 160 VLDVYSFGIVIKGC-----CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  +F EM + G+  N   Y +LI G FK G   +  E++E++  E  V+PN+ TYN 
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEHGVFPNLHTYNC 273

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N LCK GR  +  +++D M++     +  TY + I GLC+      A  V  +M   G
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           I  + +TYN +IDGFC   K+ +   L   +  +G   ++V+YNIL+ G  + G    A 
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + + + E+       T+ +LI+   ++  + KAIQ+ + +EE                 
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE----------------- 436

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   + +T + L++GF    ++  A  LFK M  K   P  V YNT++ G CK     
Sbjct: 437 -LGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY 495

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            A    +EM EK   P++ +Y  +I  LC+ +K   A  L  + +  G  P  ++ N++
Sbjct: 496 RALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 183/354 (51%), Gaps = 19/354 (5%)

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           + +D  ++  +I G C AG+I++ F+L   +   G   NVV Y  LI G  + G++++A 
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            ++  + +    A+  T+ VLI+GL KNG   +  +                  +  +M 
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE------------------MYEKMQ 260

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +HG   N +T N +MN   +  + ++A  +F EM  +G S  +V+YNTLI GLC+  +  
Sbjct: 261 EHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA   + +M   G  P++ITY+ LI+G C  +K+  AL LC     +G +P +  YNIL+
Sbjct: 321 EANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILV 380

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C  G    A ++   M++R   P+ VTY  L+D   ++ + +KA+++ + + E  L 
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLT 440

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           PD+ +Y++ + G C   RM++A       + +   P  + ++ +V      G+S
Sbjct: 441 PDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G +++     +  +  L   +     S  + V+IN   ++  L+ +I   NE+ + G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 376 EGRLADAASLVNRM-------------------DKHGCKLNAYTCNSLMNGFIQASKLEN 416
                  ++  N +                    K    L+ Y+   ++ G  +A ++E 
Sbjct: 125 ---FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEK 181

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           +  L  E+   G SP VV Y TLI+G CK     +A     EM + G   +  TY++LI+
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL ++       ++  +  + G  P++  YN +++ LC  G+ +DA +++  M++R    
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTYNTL+ GL +    ++A E+ + +  + + P++I+YN  + G C   ++  A    
Sbjct: 302 NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLC 361

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAST 625
            D   RG+ P+ +T++ILV      G ++
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTS 390



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 10/259 (3%)

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K+     A  VF  M E         +    G LCR+ +  +A   ++ +   G+ P++ 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+I+G      L  AL++  ++  RG+  ++V YNIL+ GF KKGD   A ++ + +
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             E  + P+ VTY ++I+   +    ++ +++   M++     D  TY   IHG C  G 
Sbjct: 400 -EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +  A R+++ MVE     + V YN M+ G+C+ G       L+  M  K    NV SY  
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 316 LIRGLLENGKVDEAISIWE 334
           +I  L +  K  EA  + E
Sbjct: 519 MIEVLCKERKSKEAEGLVE 537


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 243/485 (50%), Gaps = 21/485 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+  +Y  +I+G  K GD+ GA ++  +M ++ V  NVV Y+ +I+G+ KKG    A  I
Sbjct: 294 PNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRI 353

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +++ ++ ++ PN   Y  +I+G  K G+ D  +++++ MK N  E++SF   +FI+ L 
Sbjct: 354 MKKM-LDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLK 412

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           +   +E AE + + M+  G+ +D V Y +++DGF + G+    F + E M   G   +VV
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN+LI GLL  GK D A S++  +RE     D  T+  +IN  CK G L  AI++ NE 
Sbjct: 473 AYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNE- 530

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                            M  H    N+ TCN L+ G  +A + E AI +  EM   G  P
Sbjct: 531 -----------------MKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V  +  L+N   K ER        K ++  G K +   Y+ LI  LC       A  + 
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
               ++G + D   YN LIHG   +  +E AL  Y+ M      P + TYN L+ GL   
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAA 693

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G   KA EI + + +  L PD   YN  + G        +A +F  + + +G++P T T+
Sbjct: 694 GLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTY 753

Query: 612 HILVR 616
           ++L+ 
Sbjct: 754 NVLIE 758



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 257/565 (45%), Gaps = 69/565 (12%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++    +A      +   G  PDV +Y ++INGL K G L  A A+  EM + GV  N 
Sbjct: 167 CKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNH 226

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS-----VYPNVVTYNVMINGLCKCGRFDEC 225
           V Y IL+D  FK G        WE  + ++      V  ++V    +I+GL K G+ DE 
Sbjct: 227 VVYAILVDSLFKAG------SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEA 280

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             M+  + K     ++ TY + I G CK G+++GAE + R+M +  +  + VTY+++I+G
Sbjct: 281 EAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIING 340

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           + + G +     + + M  +  + N   Y  LI G L+ GK D A+ ++  ++      +
Sbjct: 341 YTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEEN 400

Query: 345 STTHGVLIN------------GLCKNGYLNKAIQILNEVEEGG-------EGRLADAASL 385
           S      IN            GLCK  Y+     +L+ V            GR + A ++
Sbjct: 401 SFIVDAFINNLKRGRKMEEAEGLCK--YMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTM 458

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
             +M + G K +    N L+NG ++  K + A  ++  +   G +P   +YNT+IN  CK
Sbjct: 459 AEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCK 517

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +   A     EM      P+ IT ++L+ GL ++ + + A+ +  + L  G  P+VT+
Sbjct: 518 QGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTI 577

Query: 506 -----------------------------------YNILIHGLCSAGKVEDALQLYSNMK 530
                                              YN LI  LC  G  + A  + +NM 
Sbjct: 578 HRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMT 637

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           K     + VTYN L+ G FK+   +KAL  +  +L E + P I +YN+ L GL +   MS
Sbjct: 638 KEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMS 697

Query: 591 DAFEFLNDALCRGILPTTITWHILV 615
            A+E L+     G+ P    ++ L+
Sbjct: 698 KAYEILSKMKDSGLDPDASLYNTLI 722



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 235/459 (51%), Gaps = 21/459 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L+P++ +Y T+I+   K   L  AL++++EM   G   +VV Y+ +I+G  K+G    AK
Sbjct: 152 LEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAK 211

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +  R + +  V PN V Y ++++ L K G   E      +M       D     + I G
Sbjct: 212 ALL-REMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDG 270

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           L KAG  + AE ++  + +     + +TY AMIDG+C+ G +     L   M +K  + N
Sbjct: 271 LFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPN 330

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+Y+ +I G  + G +D A+ I + + ++N   ++  +  LI+G  K G  + A+ + N
Sbjct: 331 VVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYN 390

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E                  M  +G + N++  ++ +N   +  K+E A  L K M  KG 
Sbjct: 391 E------------------MKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGL 432

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
               V+Y +L++G  K  R   A++  ++M E G K D++ Y++LINGL +  K D A  
Sbjct: 433 LLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AES 491

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +     + G  PD   YN +I+  C  GK+E+A++L++ MK  + +PN +T N L+ GL 
Sbjct: 492 VYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLS 551

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           K G+ ++A+++ N +L   + P++  +   L     C R
Sbjct: 552 KAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCER 590



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 70/513 (13%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N LI  F   G   +  +++  + +   V PNV T+N++++  CK G     L   D +
Sbjct: 14  WNRLIYQFNATGLVSQVWDLYSEM-LSCGVLPNVFTHNILVHAWCKMGHLSLAL---DLI 69

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +  + + D+ TY + I G C+ G           MV+   F D+ T N ++ GFCR G +
Sbjct: 70  RNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSV 129

Query: 293 KECFELW-------EVMGRKGCLNV----VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           K  +  W       ++    G  N+    V+Y  LI    +   + EA+S++E +     
Sbjct: 130 K--YGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGF 187

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             D  T+  +INGLCK G L +A  +L E+++ G                  G   ++  
Sbjct: 188 LPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFI 247

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
             ++M   G   +   C +L++G  +A K + A  +F  +++  C P  ++Y  +I+G C
Sbjct: 248 YQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYC 307

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K+     A S +++M +K   P+++TYS +ING  +   +D+A+++  + L +   P+  
Sbjct: 308 KLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAY 367

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMK---------------------------------- 530
           +Y  LI G   AGK + A+ LY+ MK                                  
Sbjct: 368 IYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYM 427

Query: 531 -KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +  + + V Y +LMDG FKTG    A  +   + E  ++ D+++YN+ + GL    + 
Sbjct: 428 MSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY 487

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA    +     G+ P   T++ ++ A    G
Sbjct: 488 -DAESVYSGIRELGLAPDRATYNTMINAYCKQG 519



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 44/514 (8%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--L 110
           RI++ +  Q       +  ++I  + K    D A+D++  M         F  +A I  L
Sbjct: 352 RIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNL 411

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            R R+ E+A+     +  KGL  D  +Y ++++G  K+G    A  + ++M E G++ +V
Sbjct: 412 KRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDV 471

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN+LI+G  + G Y  A+ ++   + E  + P+  TYN MIN  CK G+ +  +++W+
Sbjct: 472 VAYNVLINGLLRLGKY-DAESVYSG-IRELGLAPDRATYNTMINAYCKQGKLENAIKLWN 529

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC--- 287
            MK +    +S T    + GL KAG  E A  V  EM+  GI  +   + A+++      
Sbjct: 530 EMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCE 589

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           RA  I +  +    MG K   N   YN LI  L   G    A  +   + ++  +AD+ T
Sbjct: 590 RADTILQMHKRLVGMGLKA--NREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVT 647

Query: 348 HGVLINGLCKNGYLNKAI----QILNEVEEGG-------------EGRLADAASLVNRMD 390
           +  LI+G  K+ ++ KA+    Q+LNE    G              G ++ A  ++++M 
Sbjct: 648 YNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMK 707

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   +A   N+L++G  +    + AI  + EM  KG  P   +YN LI    KV +  
Sbjct: 708 DSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMD 767

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQ-SKKIDM-----------ALKLCCQFLQKG 498
           +A   + EM  +   P+  TY +LI G C  SK+ ++           A  L  +  +KG
Sbjct: 768 QARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKG 827

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           F P       +       G V DA  +  +M KR
Sbjct: 828 FVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 191/429 (44%), Gaps = 34/429 (7%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P +  +N +I      G   +  +++  M       + FT+   +H  CK G++  A 
Sbjct: 7   IVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL 66

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            + R +    I VD VTYN  I GFC+ G   + F    +M +K    +  + NIL++G 
Sbjct: 67  DLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGF 123

Query: 321 LENGKVDEAISIWELLREKNCNADSTT--------HGVLINGLCKNGYLNKAIQILNEVE 372
              G V     + + L +   + D TT        +  LI+  CK               
Sbjct: 124 CRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCK--------------- 168

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +  L++A SL   M   G   +  T +S++NG  +   L  A  L +EM + G +P 
Sbjct: 169 ---QHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPN 225

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V Y  L++ L K     E++ +  +M+  G   D++  + LI+GL ++ K D A  + C
Sbjct: 226 HVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFC 285

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
              +    P+   Y  +I G C  G ++ A  L  +M+K+  VPN+VTY+++++G  K G
Sbjct: 286 TLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKG 345

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D A+ I   +L++ + P+   Y   + G     +   A +  N+    G+   +    
Sbjct: 346 MLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENS---- 401

Query: 613 ILVRAVMNN 621
            +V A +NN
Sbjct: 402 FIVDAFINN 410



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 11/213 (5%)

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L+ EM   G  P V ++N L++  CK+     A   ++ +       D +TY+  I G C
Sbjct: 33  LYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNV---DIDVDTVTYNTAIWGFC 89

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM--------KK 531
           Q    +         ++K    D    NIL+ G C  G V+    +  N+          
Sbjct: 90  QQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGT 149

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
            N  PNLVTY TL+    K     +AL ++  ++ +   PD+++Y+  + GLC    +++
Sbjct: 150 TNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTE 209

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           A   L +    G+ P  + + ILV ++   G++
Sbjct: 210 AKALLREMDKMGVNPNHVVYAILVDSLFKAGSA 242



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G ++    L + M   G   N +T N L++ + +   L  A+ L + +         V+Y
Sbjct: 25  GLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVD---IDVDTVTY 81

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NT I G C+     + + F+  M++K    D  T ++L+ G C+   +     +    + 
Sbjct: 82  NTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLID 141

Query: 497 --------KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
                       P++  Y  LI   C    + +AL LY  M     +P++VTY+++++GL
Sbjct: 142 DMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGL 201

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G   +A  +   + +  + P+ + Y I +  L       ++F + +  +  G+    
Sbjct: 202 CKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDL 261

Query: 609 ITWHILVRAVMNNGAS 624
           +    L+  +   G S
Sbjct: 262 VVCTTLIDGLFKAGKS 277



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           PT+  +N LI          + +    EML  G  P++ T+++L++  C+   + +AL L
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                      D   YN  I G C  G         S M K++   +  T N L+ G  +
Sbjct: 69  ---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 551 TGDCDKALEIWNHILEE--------RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            G       + ++++++         L P++++Y   +   C    +S+A     + +  
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 603 GILPTTITWHILVRAVMNNGAST 625
           G LP  +T+  ++  +   G  T
Sbjct: 186 GFLPDVVTYSSIINGLCKRGMLT 208


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/601 (26%), Positives = 288/601 (47%), Gaps = 20/601 (3%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKA 92
           G +   + F+ ++R L D   V     + + +  + C   E     +++ Y K  + DK 
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 93  LDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING 144
           L++   M          ++       CR+ + + +++ +  + E+GL PD+ ++ + I+ 
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261

Query: 145 LVKSGDLLGALAVFDEM----FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           L K G +L A  +F +M    +      N + YN+++ GF K G    AK ++E  + E 
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES-IREN 320

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
               ++ +YN+ + GL + G+F E   +  +M         ++Y   + GLCK G +  A
Sbjct: 321 DDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRG 319
           + +   M  +G+  DAVTY  ++ G+C  GK+     L + M R  CL N  + NIL+  
Sbjct: 381 KTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L   G++ EA  +   + EK    D+ T  ++++GLC +G L+KAI+I+  +   G   L
Sbjct: 441 LWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 380 ADAA-SLVNRMD----KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            +   S +  +D    ++ C  +  T ++L+NG  +A +   A  LF EM  +   P  +
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSL 560

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN  I+  CK  +   A+  +K+M +KG    + TY+ LI GL    +I     L  + 
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            +KG +P++  YN  I  LC  GKVEDA  L   M ++N  PN+ ++  L+    K  D 
Sbjct: 621 REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDF 680

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D A E++   +    + + + Y++    L +  ++  A E L   L RG    T  +  L
Sbjct: 681 DMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739

Query: 615 V 615
           V
Sbjct: 740 V 740



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 176/687 (25%), Positives = 313/687 (45%), Gaps = 102/687 (14%)

Query: 11  LLKAEKNPHTALALFD---SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI--- 64
           LLK   NP  A  +F    S+  E  +  S      +   L+  K+   +  +  LI   
Sbjct: 9   LLKNTNNPRLAWRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEELHNLILSS 68

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFG-CEAGIL---------CRKR 114
            IQK        LSV+  + K++  DKA   FQ +   F   + GI           R+R
Sbjct: 69  SIQKTKLSS--LLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRER 126

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E        +   G+ P+ Y++  +I  L  S  +  A  +FDEM E+G + N   + 
Sbjct: 127 RVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           IL+ G+ K G   +  E+     ME+  V PN V YN +++  C+ GR D+  ++ ++M+
Sbjct: 187 ILVRGYCKAGLTDKGLELLNS--MESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMR 244

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF----VDAVTYNAMIDGFCRA 289
           +     D  T+ S I  LCK G V  A R++ +M           +++TYN M+ GFC+ 
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +++   L+E +      +++ SYNI ++GL+ +GK  EA ++ + + +K       ++
Sbjct: 305 GLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSY 364

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++GLCK                   G L+DA ++V  M ++G   +A T   L++G+
Sbjct: 365 NILMDGLCK------------------LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               K++ A  L +EM R  C P   + N L++ L  + R  EA   +++M EKG+  D 
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDT 466

Query: 469 ITYSLLINGLCQSKKIDMALKLCC-----------------------QFLQKGFTPDVTM 505
           +T +++++GLC S ++D A+++                           ++    PD+  
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD------------ 553
           Y+ L++GLC AG+  +A  L++ M      P+ + YN  +    K G             
Sbjct: 527 YSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDME 586

Query: 554 ---CDKALEIWNHIL--------------------EERLRPDIISYNITLKGLCSCSRMS 590
              C K+LE +N ++                    E+ + P+I +YN  ++ LC   ++ 
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVE 646

Query: 591 DAFEFLNDALCRGILPTTITWHILVRA 617
           DA   L++ + + I P   ++  L+ A
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIGA 673



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 251/547 (45%), Gaps = 50/547 (9%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           A IL R +  E+ +   N +    + K  + S  +V++   KS  +  A   F  +  R 
Sbjct: 46  ACILVRAKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRF 105

Query: 166 VETN--VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            E    +  YN+L++   ++        +++ +V+   + P   T+N++I  LC     D
Sbjct: 106 PENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVL-CGISPETYTFNLLIRALCDSSCVD 164

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              E++D M +   + + FT+   + G CKAG  +    +   M   G+  + V YN ++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIV 224

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN-- 340
             FCR G+  +  +L E M  +G + ++V++N  I  L + GKV +A  I+  +      
Sbjct: 225 SSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284

Query: 341 --CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                +S T+ +++ G CK G L  A  +   + E  +        LV+        L +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD--------LVS--------LQS 328

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           Y  N  + G ++  K   A  + K+M  KG  P++ SYN L++GLCK+    +A + V  
Sbjct: 329 Y--NIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  PD +TY  L++G C   K+D A  L  + ++    P+    NIL+H L + G+
Sbjct: 387 MKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGR 446

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW----------------- 561
           + +A +L   M ++    + VT N ++DGL  +G+ DKA+EI                  
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 562 ------NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
                 + ++E    PD+I+Y+  L GLC   R ++A     + +   + P ++ ++I +
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566

Query: 616 RAVMNNG 622
                 G
Sbjct: 567 HHFCKQG 573



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 178/398 (44%), Gaps = 39/398 (9%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +GC     C   + + AK  L  +      P+ Y+   +++ L   G +  A  +  +M 
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMN 458

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL----------------------VMET 200
           E+G   + V  NI++DG    G+  +A EI + +                      ++E 
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           +  P+++TY+ ++NGLCK GRF E   ++  M   + + DS  Y  FIH  CK G +  A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSA 578

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
            RV ++M + G      TYN++I G     +I E   L + M  KG   N+ +YN  I+ 
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQY 638

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV------EE 373
           L E GKV++A ++ + + +KN   +  +   LI   CK    + A ++          +E
Sbjct: 639 LCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKE 698

Query: 374 G----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           G            G+L  A  L+  +   G +L  +    L+    +  +LE A  +  +
Sbjct: 699 GLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHK 758

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           M  KG      +   +I+GL K+    EA +F ++M+E
Sbjct: 759 MIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMME 796


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 289/627 (46%), Gaps = 73/627 (11%)

Query: 17  NPHTALALFDSATREPGYAHSPHL-FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDV 75
           NP   L  F  A+  P  +   ++ +  +L+ ++  +L   +  +LE ++  + + P   
Sbjct: 71  NPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMK-NRNFKPTLE 129

Query: 76  AL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
           AL SVI  Y +    DKA+ +F  + E++ C   +         L +  + + A    + 
Sbjct: 130 ALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDK 189

Query: 126 LWEKG------LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           + E+G      L  D YS   V+ GL   G +     + D+ +  G   NVV YN++IDG
Sbjct: 190 MLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDG 249

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + KKGD  RA  ++E L ++    P + TY  +I+G CK G+F    ++ + M       
Sbjct: 250 YCKKGDLKRATRVFEELKLK-GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNV 308

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +   + S I    K G V+ A  + R M E G   D  TYN +I+  C  G+IKE  E  
Sbjct: 309 NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFL 368

Query: 300 EVMGRKGCL------------------------------------NVVSYNILIRGLLEN 323
           E    +  L                                    ++VSY   I G +  
Sbjct: 369 ERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAG 428

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G++D A+ + E + EK    D+  + VL++GLCK                  +GR   A 
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK------------------KGRFPAAK 470

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L++ M     + +AY   +L++GFI+ ++L+ A  LF+ +  KG  P VV YN +I GL
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGL 530

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK  +  +A S+V +M      PD  T+S +I+G  +   +D ALK+  Q +++ + P+V
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y  LI+G C    +  A +++  M+  N  PN+VTY  L+ G  KTG  +KA   +  
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFEL 650

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMS 590
           +L     P+  +++  + GL + +  +
Sbjct: 651 MLMNNCLPNDTTFHYLINGLTNITNTT 677



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 225/497 (45%), Gaps = 83/497 (16%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y +++  +VK         V ++M  R  +  +   N +I  + + G   +A +++  +
Sbjct: 95  AYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMV 154

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
               + +P VV  N ++N L K G+ D   E++D+M   ER  D        HGL     
Sbjct: 155 CELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKML--ERGGD--------HGL----- 199

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
                          + VD  +   ++ G C  GK++E  +L +     GC+ NVV YN+
Sbjct: 200 --------------DLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNV 245

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G  + G +  A  ++E L+ K       T+G LI+G CK G      Q+LNE     
Sbjct: 246 IIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNE----- 300

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                        M+  G  +N    NS+++   +   ++ A  + + M+  GC P + +
Sbjct: 301 -------------MNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITT 347

Query: 436 YNTLINGLCKVERFGEAYSFVK-----------------------------------EML 460
           YN LIN  C   R  EA  F++                                   ++ 
Sbjct: 348 YNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIA 407

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E G KPD+++Y   I+G     +ID+AL +  + ++KG  PD  +YN+L+ GLC  G+  
Sbjct: 408 ETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFP 467

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A  L S M   N  P+   Y TL+DG  +  + DKA E++  ++ + + P ++ YN+ +
Sbjct: 468 AAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMI 527

Query: 581 KGLCSCSRMSDAFEFLN 597
           KGLC C +M+DA  ++N
Sbjct: 528 KGLCKCGKMTDAVSYVN 544



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 236/562 (41%), Gaps = 101/562 (17%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K   ++A R    L  KG  P + +YG +I+G  K+G       + +EM   G+  NV
Sbjct: 251 CKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNV 310

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N +ID  +K G   +A E+  R++ E    P++ TYN++IN  C  GR  E  E  +
Sbjct: 311 KVFNSIIDAKYKYGLVDKAAEMM-RMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLE 369

Query: 231 RMKKNEREKDSFTYC-----------------------------------SFIHGLCKAG 255
           R K+     + F+Y                                    +FIHG    G
Sbjct: 370 RAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGG 429

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK------------------------ 291
            ++ A  V  +M+E G+F DA  YN ++ G C+ G+                        
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489

Query: 292 -----------IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
                      + +  EL+EV+  KG    VV YN++I+GL + GK+ +A+S    ++  
Sbjct: 490 TLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------GGEGRLAD---A 382
           N   D  TH  +I+G  K   L+ A+++  ++ +               G  ++AD   A
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRA 609

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +   M     + N  T   L+ GF +  K E A   F+ M    C P   +++ LING
Sbjct: 610 EKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING 669

Query: 443 LCKV-------ERFGE-----AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           L  +       E+  E        F   M+ +GW   + TY+ +I  LC+   +D A  L
Sbjct: 670 LTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLL 729

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + L+KGF  D   ++ L+HGLC  GK ++   + S    +        Y+  +D    
Sbjct: 730 QTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLY 789

Query: 551 TGDCDKALEIWNHILEERLRPD 572
            G   +A  I  +++E+    D
Sbjct: 790 DGKPSEASYILLNLIEDSKLSD 811



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 42/213 (19%)

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM------------------------- 468
           V+Y++L+  + K   F E    +++M  + +KP +                         
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYM 153

Query: 469 -----------ITYSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMYN----ILIH 511
                      +  + L+N L ++ K+D+A +L  + L++G     D+ + N    I++ 
Sbjct: 154 VCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVK 213

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC  GKVE+  +L  +     CVPN+V YN ++DG  K GD  +A  ++  +  +   P
Sbjct: 214 GLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLP 273

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
            + +Y   + G C   +     + LN+    G+
Sbjct: 274 TLETYGALIDGFCKAGKFQVVDQLLNEMNVMGL 306


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/578 (26%), Positives = 270/578 (46%), Gaps = 58/578 (10%)

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           A G+ +   +ALD       +    A I   CR  Q   A+R   ++    + P+ Y+Y 
Sbjct: 56  AAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYF 112

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA---------- 189
            ++  L   G +  AL V DEM  RG        +++++   + G +  A          
Sbjct: 113 PIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAK 172

Query: 190 -------------KEIWERLVMETSVY-----------PNVVTYNVMINGLCKCGRFDEC 225
                          I E+  ++  V            P++V+YN ++ GLC   R+D+ 
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            E+   M +     +  T+ + I  LC+ G  E       +M E G   D   Y  +IDG
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G  +   ++   M   G   NVV YN +++GL    + +EA  +   + +++C  D
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T  +L++  C+NG +++ I++L +                  M +HGC  +  T  ++
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQ------------------MLEHGCIPDVITYTTV 394

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NGF +   ++ A+ L K MS  GC P  +SY  ++ GLC+ ER+ +A   +  M+++G 
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 454

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+ +T++ LIN +C+   ++ A++L  Q L  G +PD+  Y+ +I GL  AGK E+AL+
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 514

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L + M  +   PN + Y+++   L + G  DK +++++ I +  +R D   YN  +  LC
Sbjct: 515 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 574

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                  A +F    +  G +P   T+ IL+R + + G
Sbjct: 575 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 245/493 (49%), Gaps = 20/493 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  A R L  L  KG   D  +   V++ + + G +   + +  ++   G E ++
Sbjct: 154 CRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDI 213

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G      +   +E+   +V      PNV T+N +I  LC+ G F++  E   
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMV-RVGCPPNVATFNTLIAYLCRNGLFEQVHEALS 272

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M ++    D   Y + I G+CK G+ E A  +   M   G+  + V YN ++ G C A 
Sbjct: 273 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE 332

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E  +L   M ++ C L+ V++NIL+    +NG VD  I + E + E  C  D  T+ 
Sbjct: 333 RWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYT 392

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +ING CK G +++A+ +L                    M   GCK N  +   ++ G  
Sbjct: 393 TVINGFCKEGLVDEAVMLLKN------------------MSACGCKPNTISYTIVLKGLC 434

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A +  +A  L   M ++GC P  V++NTLIN +CK     +A   +K+ML  G  PD+I
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLI 494

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +YS +I+GL ++ K + AL+L    + KG TP+  +Y+ +   L   G+ +  +Q++ ++
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 554

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +      +   YN ++  L K  + D+A++ + +++     P+  +Y I ++GL S   +
Sbjct: 555 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 614

Query: 590 SDAFEFLNDALCR 602
            +A + L++   R
Sbjct: 615 REAQDLLSELCSR 627



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 196/429 (45%), Gaps = 57/429 (13%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I  LC AG    A R    +  +G     V YNAMI G+CRAG++     L   +   
Sbjct: 49  ALIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP 105

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N  +Y  ++R L   G + +A+++ + +  + C A      V++   C+ G    A+
Sbjct: 106 P--NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           + L  +   G                 +G + +   L+ ++   GC+ +  + N+++ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A + ++   L  EM R GC P V ++NTLI  LC+   F + +  + +M E G  PD+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA------------ 516
             Y+ +I+G+C+    ++A  +  +    G  P+V  YN ++ GLCSA            
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 517 -----------------------GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                                  G V+  ++L   M +  C+P+++TY T+++G  K G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+A+ +  ++     +P+ ISY I LKGLC   R  DA E ++  + +G LP  +T++ 
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463

Query: 614 LVRAVMNNG 622
           L+  +   G
Sbjct: 464 LINFMCKKG 472


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 233/473 (49%), Gaps = 20/473 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   + ++   L ++  KG  PDV     +I G     ++  A+ V  E+ E+  + +V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI+GF K      A  + +R+       P+ VTYN+MI  LC  G+ D  L++ D
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++  +  +    TY   I      G V+ A ++  EM+  G+  D  TYN +I G C+ G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +   FE+   +  KGC  +V+SYNIL+R LL  GK +E   +   +  + C+ +  T+ 
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI  LC++G + +A+ +L  ++E G                 EGRL  A   +  M   
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N+++    +  K + A+ +F ++   GCSP   SYNT+ + L        A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM+  G  PD ITY+ +I+ LC+   +D A +L        F P V  YNI++ G
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            C A ++EDA+ +  +M    C PN  TY  L++G+   G   +A+E+ N ++
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 217/455 (47%), Gaps = 20/455 (4%)

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G+Y+ +  + E +V +    P+V+    +I G        + + + + ++K   + D 
Sbjct: 97  RSGNYIESLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F Y + I+G CK   ++ A RV   M       D VTYN MI   C  GK+    ++ + 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +    C   V++Y ILI   +  G VDEA+ + + +  +    D  T+  +I G+CK G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +++A +++  +E  G                 +G+  +   L+ +M    C  N  T + 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+    +  K+E A+ L K M  KG +P   SY+ LI   C+  R   A  F++ M+  G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD++ Y+ ++  LC++ K D AL++  +  + G +P+ + YN +   L S+G    AL
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            +   M      P+ +TYN+++  L + G  DKA E+   +      P +++YNI L G 
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           C   R+ DA + L+  +  G  P   T+ +L+  +
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 227/453 (50%), Gaps = 28/453 (6%)

Query: 109 ILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ILC K        R   KA R +  + EK  +PDV++Y  +ING  K   +  A  V D 
Sbjct: 121 ILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDR 179

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  +    + V YNI+I     +G    A ++ ++L+ + +  P V+TY ++I      G
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSD-NCQPTVITYTILIEATMLEG 238

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE L++ D M     + D FTY + I G+CK G V+ A  + R +   G   D ++YN
Sbjct: 239 GVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++      GK +E  +L   M  + C  NVV+Y+ILI  L  +GK++EA+++ +L++EK
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ ++  LI   C+ G L+ AI+ L  +   G                  G+   A
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +  ++ + GC  N+ + N++ +    +     A+ +  EM   G  P  ++YN++I+ 
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+     +A+  + +M    + P ++TY++++ G C++ +I+ A+ +    +  G  P+
Sbjct: 479 LCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPN 538

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            T Y +LI G+  AG   +A++L +++ + N +
Sbjct: 539 ETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 17/391 (4%)

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           H  C++GN   +  +   MV  G   D +    +I GF     + +   + E++ + G  
Sbjct: 93  HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQP 152

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +YN LI G  +  ++D+A  + + +R K+ + D+ T+ ++I  LC  G L+ A+++L
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +++                     EG + +A  L++ M   G K + +T N+++ G  + 
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++ A  + + +  KGC P V+SYN L+  L    ++ E    + +M  +   P+++TY
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S+LI  LC+  KI+ A+ L     +KG TPD   Y+ LI   C  G+++ A++    M  
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C+P++V YNT++  L K G  D+ALEI+  + E    P+  SYN     L S      
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   + + +  GI P  IT++ ++  +   G
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREG 483



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 234/480 (48%), Gaps = 42/480 (8%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRILELIEIQKC 69
           L +F  + R   Y  S HL   ++R+  +P +++            +V + + ++EI + 
Sbjct: 89  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK 148

Query: 70  YCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           +   DV    ++I  + K +  D A  V  RM           +    G LC + + + A
Sbjct: 149 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            + L+ L     +P V +Y  +I   +  G +  AL + DEM  RG++ ++  YN +I G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K+G   RA E+   L ++    P+V++YN+++  L   G+++E  ++  +M   + + 
Sbjct: 269 MCKEGMVDRAFEMIRNLELK-GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 327

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY   I  LC+ G +E A  + + M E G+  DA +Y+ +I  FCR G++    E  
Sbjct: 328 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           E M   GCL ++V+YN ++  L +NGK D+A+ I+  L E  C+ +S+++  + + L  +
Sbjct: 388 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 447

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G   +A+ ++ E                  M  +G   +  T NS+++   +   ++ A 
Sbjct: 448 GDKIRALHMILE------------------MVSNGIDPDEITYNSMISCLCREGMVDKAF 489

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M      P+VV+YN ++ G CK  R  +A   +  M+  G +P+  TY++LI G+
Sbjct: 490 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 1/209 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ + + A  FL ++   G  PD+ +Y TV+  L K+G    AL +F ++ E G   N
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +    +  GD +RA  +   +V    + P+ +TYN MI+ LC+ G  D+  E+ 
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMV-SNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+  E      TY   + G CKA  +E A  V   MV +G   +  TY  +I+G   A
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIR 318
           G   E  EL   + R   ++  S+  L R
Sbjct: 553 GYRAEAMELANDLVRINAISEYSFKRLHR 581


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 303/633 (47%), Gaps = 35/633 (5%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE- 62
           +AK ++ L      P  A + F+   +E GY+H P+ +  I+R L         SR L+ 
Sbjct: 59  TAKVVITLNNLRNEPSLAFSYFNQ-LKESGYSHDPYTYAAIVRILC----FWGWSRKLDS 113

Query: 63  -LIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
            L+EI K     D  + ++ +A G + + +++  V  ++++       +      F++A 
Sbjct: 114 ILMEIIKKDGNLDFGIVNLFEALG-DGIANESFSVLVQVSDAL---IKVCVASGMFDQAF 169

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
             L      G  P + S   ++N LV+S  +  A+A++ ++   G+  N   Y I I GF
Sbjct: 170 DVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGF 229

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            +KG+   A +++ R + E+ V PN  +Y   I GLC  GR D   ++   +   +   D
Sbjct: 230 CRKGNLAEAIDVF-RDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMD 288

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            F Y   I G C    ++ AE + REM + G   D   Y A+I G+C  G + +   L +
Sbjct: 289 VFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHD 348

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  KG   N V  + +++GL + G   E  + ++  ++     D   + V+++ LCK G
Sbjct: 349 EMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLG 408

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            + +A+++L E++                    +G++ DA ++   M   G K +  T N
Sbjct: 409 KVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYN 468

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            L  GF +    + A+ L   M  +G  P  V++N +I GLC   +  +A +F   + EK
Sbjct: 469 VLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEK 528

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
             +     YS ++NG C++  ++ A  L  +  ++G       +  L+  LCS G  E A
Sbjct: 529 CLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKA 584

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L L   M   N  P ++ Y+ ++  LF+ G+ +KA  ++N +++  L PD+I+Y I + G
Sbjct: 585 LCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING 644

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            C  ++M +A+  L D   RGI P  IT+ +L+
Sbjct: 645 YCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLL 677



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 167/632 (26%), Positives = 286/632 (45%), Gaps = 55/632 (8%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           M I+  R L       N +T         R+   A +  +F  +    + P    + +  
Sbjct: 202 MAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTT-- 259

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
              IE    +   D+   V+Q      +P   +DVF     I G      C + + ++A+
Sbjct: 260 --FIEGLCLHGRSDLGFKVLQDVINAKIP---MDVFAYTVVIRG-----FCSEMKLKEAE 309

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
             L  + ++G  PDVY Y  +I+G    G+LL ALA+ DEM  +GV+TN V  + ++ G 
Sbjct: 310 SILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGL 369

Query: 181 FKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
            + G    A E+  +     +  ++ +   YNV+++ LCK G+ +E +E+   MK  +  
Sbjct: 370 SQMG---MASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMV 426

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D   Y + I G    G V  A  +YREM + G   D VTYN +  GF R G  +E   L
Sbjct: 427 PDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M  +G   + V++N++I GL   GKVD+A + ++ L EK        +  ++NG C+
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCE 542

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
             ++NKA  +L  +    +GR+   AS                   L+         E A
Sbjct: 543 ANHVNKAFALL--IRLSKQGRILKKASFF----------------KLLGNLCSEGDSEKA 584

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + L + M     +PT++ Y+ +I  L +     +A      ++++G  PD+ITY+++ING
Sbjct: 585 LCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING 644

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH---------------GLCSAGKVEDA 522
            C+  K+  A  +      +G  PDV  Y +L++                + S   + D 
Sbjct: 645 YCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDP 704

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             L+S MK  +  P+++ Y  L+D   KT +   A+ ++N +++  L PD ++Y   L G
Sbjct: 705 SALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSG 764

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            C+   +  A    ++ L +GI P   T  +L
Sbjct: 765 YCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 204/435 (46%), Gaps = 50/435 (11%)

Query: 229 WDRMKKNEREKDSFTYCSFIHGLC-----------------KAGNVEGAERVYREMVESG 271
           ++++K++    D +TY + +  LC                 K GN++       E +  G
Sbjct: 80  FNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDG 139

Query: 272 IFVDAVTY-----NAMIDGFCRAGKIKECFELWEVMGRKGC---LNVVSYNILIRGLLEN 323
           I  ++ +      +A+I     +G   + F++  ++  K C     ++S N L+  L+E+
Sbjct: 140 IANESFSVLVQVSDALIKVCVASGMFDQAFDV--LLQTKHCGFAPQILSCNFLMNRLVES 197

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------- 375
            KVD AI+I+  L+    N +  T+ + I G C+ G L +AI +  ++EE G        
Sbjct: 198 RKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSY 257

Query: 376 ---------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR      ++  +      ++ +    ++ GF    KL+ A  + +EM +
Sbjct: 258 TTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEK 317

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G +P V  Y  LI+G C V    +A +   EM+ KG K + +  S ++ GL Q   + M
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQ---MGM 374

Query: 487 ALKLCCQFLQ---KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           A ++  QF +    G   D   YN+++  LC  GKVE+A++L   MK +  VP+++ Y T
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTT 434

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++ G F  G    AL I+  + +   +PDI++YN+   G        +A   LN    +G
Sbjct: 435 VISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQG 494

Query: 604 ILPTTITWHILVRAV 618
           + P T+T ++++  +
Sbjct: 495 VKPDTVTHNMIIEGL 509



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/301 (18%), Positives = 126/301 (41%), Gaps = 4/301 (1%)

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV-EEGGE---GRLADAAS 384
           A S +  L+E   + D  T+  ++  LC  G+  K   IL E+ ++ G    G +    +
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L + +      +     ++L+   + +   + A  +  +    G +P ++S N L+N L 
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +  +   A +  +++   G  P+  TY++ I G C+   +  A+ +     + G TP+  
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y   I GLC  G+ +   ++  ++       ++  Y  ++ G        +A  I   +
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            ++   PD+  Y   + G C    +  A    ++ + +G+    +    +++ +   G +
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 625 T 625
           +
Sbjct: 376 S 376


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 274/550 (49%), Gaps = 35/550 (6%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI--EIQKCYCPEDVALSV 79
           L LF    R   +A   ++   I+    D  L  +V RI+  I  E  +    E     +
Sbjct: 72  LILFSRLYRARKFAEMKNVLKFIVN---DGNLWSNVERIVSSIGGEFNEPSIVEKFCDML 128

Query: 80  IQAYGKNSMPDKALDVF----QRMNEI--FGCEAGILCRKRQ--FEKAKRFLNSLWEKGL 131
            + Y  N M D +L+VF    ++  EI    C   +L  KR    E    FL  + + G+
Sbjct: 129 FRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGI 188

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +  V S+  V++GL K G+++ A A+ DE+  +G + +V+ YN L++G+ +  D     E
Sbjct: 189 EIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNE 248

Query: 192 IWERLVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           I    +ME +V   NV TY ++I    +  + +E  +++D M K   E D + Y S I+ 
Sbjct: 249 ILS--LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINW 306

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            CK GN++ A  ++ EM E  +  +A TY A+I+G C+AG++K    +   M  KG  +N
Sbjct: 307 NCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVN 366

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V +N L+ G  + G +DEA+ +  ++++K    D+ T  ++ +G C++           
Sbjct: 367 RVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRS----------- 415

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   R  +A  L+  M++ G   N  + + L++ + +      A  LFK M +KG 
Sbjct: 416 -------NRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 468

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P+VV+YN  I   CK  +  EAY  + EM E+G  PD  TY+ LI+G   S  +D AL+
Sbjct: 469 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 528

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +  Q G   +V  Y ++I GL   G+ ++A +LY  M K   VP+   Y++L+  L 
Sbjct: 529 LFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 588

Query: 550 KTGDCDKALE 559
           K G     LE
Sbjct: 589 KVGPLVSGLE 598



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 283/573 (49%), Gaps = 38/573 (6%)

Query: 7   RLLNLLKAEKNPHTA--LALFDSATREPGYAHSPHLFHHIL--RRLIDPKLVVHVSRILE 62
           R++ L+ ++ N  T   L  FD   + P  +  P L  H++   RL   +    +  +L+
Sbjct: 35  RVMQLVLSDPNLPTRSCLRFFDFLRQNP--SRKPDLPAHLILFSRLYRARKFAEMKNVLK 92

Query: 63  LI--EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
            I  +       E +  S+   + + S+ +K  D+  R          +    R F+ + 
Sbjct: 93  FIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFR----------VYMDNRMFDSSL 142

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              +   +KG + D  S    +  L +SG++   +    +M + G+E  V  +  ++DG 
Sbjct: 143 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 202

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            KKG+ +RAK + + LV +    P+V+TYN ++NG  +        E+   M+KN  + +
Sbjct: 203 CKKGEVVRAKALMDELVCK-GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYN 261

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   I    ++  +E AE+++ EM++ GI  D   Y ++I+  C+ G +K  F L++
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321

Query: 301 VMG-RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  R+   N  +Y  LI G  + G++  A  +   ++ K  + +      L++G CK G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +++A++                  L N M + G +++A+TCN + +GF ++++ E A  
Sbjct: 382 MIDEALR------------------LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 423

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L   M  +G +P VVS++ LI+  CK + F EA    K M +KG  P ++TY+  I   C
Sbjct: 424 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 483

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  K++ A KL  +  ++G  PD   Y  LI G  ++G V+ AL+L++ M +     N+V
Sbjct: 484 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 543

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           TY  ++ GL K G  D+A ++++ + +E + PD
Sbjct: 544 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 576



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 217/454 (47%), Gaps = 53/454 (11%)

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           FD  LE++D  +K   E D  +   F+  L ++GN+E      R+MV+SGI +   ++ A
Sbjct: 138 FDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 197

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE------------------ 322
           ++DG C+ G++     L + +  KG   +V++YN L+ G +E                  
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257

Query: 323 -----------------NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
                            + K++EA  +++ + +K    D   +  +IN  CK G + +A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 366 QILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            + +E+ E                    G +  A  +VN M   G  +N    N+LM+G+
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ A+ L   M +KG      + N + +G C+  R  EA   +  M E+G  P++
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +++S+LI+  C+ +    A +L     +KG  P V  YN  I   C  GK+E+A +L + 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M++R  +P+  TY +L+DG   +G+ D+ALE++N + +  L  ++++Y + + GL    R
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +AF+  ++    GI+P    +  L+ ++   G
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 266/519 (51%), Gaps = 32/519 (6%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRM-NE-------IFGCEAGILCRKRQFEKAKRFLNSL 126
            A S+I  + KN+    ALD+F +M NE        F        +  + EKA  F   +
Sbjct: 340 AATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKM 399

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
              GL P V+   T+I G +K      AL +FDE FE G+    +C N ++    K+G  
Sbjct: 400 ESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFIC-NTILSWLCKQGKI 458

Query: 187 MRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            +A E+  +  ME+  + PNVV+YN ++   C+    D    ++  M +   + +++TY 
Sbjct: 459 DKATELLRK--MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYS 516

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--G 303
             I G  K  + +    V  +M  S I V+ V Y  +I+G C+ G+  +  EL   M   
Sbjct: 517 ILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 576

Query: 304 RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           ++ C++ +SYN +I G ++ G++D A++ +E +     + +  T+  L++GLCKN  +++
Sbjct: 577 KRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQ 636

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           A+++ +E                  M   G KL+     +L++GF + S +E+A  LF E
Sbjct: 637 ALEMRDE------------------MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSE 678

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +  +G +P+   YN+LI+G   +     A    K+ML+ G + D+ TY+ LI+GL +   
Sbjct: 679 LLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGN 738

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           + +A  L  +    G  PD  MY ++++GL   G+    ++++  MKK N  PN++ YN 
Sbjct: 739 LILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 798

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++ G ++ G+ D+A  + + +L++ + PD  +++I + G
Sbjct: 799 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 167/601 (27%), Positives = 276/601 (45%), Gaps = 67/601 (11%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++A  +   P +AL+VF R  E        ++       C+      A   L  + EK 
Sbjct: 238 LMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKK 297

Query: 131 L-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           L  P   +Y +VI   VK G++  A+   DEM   G+  NVV    LI G  K  D   A
Sbjct: 298 LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSA 357

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +++ ++  E    PN VT++V+I    K G  ++ LE + +M+        F   + I 
Sbjct: 358 LDLFYKMENEGP-SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G  K    E A +++ E  E+G+  +    N ++   C+ GKI +  EL   M  +G   
Sbjct: 417 GWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGP 475

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVVSYN ++        +D A +++  + EK    ++ T+ +LI+G  KN      ++++
Sbjct: 476 NVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVV 535

Query: 369 NE-----VEEGGE------------GRLADAASLVNRM--DKHGCKLNAYTCNSLMNGFI 409
           N+     +E  G             G+ + A  L+  M  +K  C ++  + NS+++GFI
Sbjct: 536 NQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC-VSCMSYNSIIDGFI 594

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +++ A+  ++EM   G SP V++Y +L++GLCK  R  +A     EM  KG K D+ 
Sbjct: 595 KEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIP 654

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  LI+G C+   ++ A  L  + L++G  P   +YN LI G  + G +  AL LY  M
Sbjct: 655 AYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKM 714

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR- 588
            K     +L TY TL+DGL K G+   A +++  +    L PD I Y + + GL    + 
Sbjct: 715 LKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQF 774

Query: 589 ----------------------------------MSDAFEFLNDALCRGILPTTITWHIL 614
                                             + +AF   ++ L +GILP   T+ IL
Sbjct: 775 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 834

Query: 615 V 615
           V
Sbjct: 835 V 835



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 237/496 (47%), Gaps = 24/496 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G + +  ++  ++N   K      A+ + ++M E GV   V   N  +    ++     A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           KE++ R+V    V  +  T  +++    +  +  E LE++ R  +   E DS  Y   + 
Sbjct: 217 KELYSRMVA-IGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQ 275

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
             CK  N+  A  + REM E  + V +  TY ++I    + G +++     + M   G  
Sbjct: 276 ACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGIS 335

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           +NVV+   LI G  +N  +  A+ ++  +  +  + +S T  VLI    KNG + KA++ 
Sbjct: 336 MNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEF 395

Query: 368 LNEVEEGG------------EGRLA-----DAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
             ++E  G            +G L      +A  L +   + G   N + CN++++   +
Sbjct: 396 YKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCK 454

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             K++ A  L ++M  +G  P VVSYN ++   C+ +    A +    MLEKG KP+  T
Sbjct: 455 QGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYT 514

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM- 529
           YS+LI+G  ++      L++  Q        +  +Y  +I+GLC  G+   A +L +NM 
Sbjct: 515 YSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 574

Query: 530 -KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            +KR CV + ++YN+++DG  K G+ D A+  +  +    + P++I+Y   + GLC  +R
Sbjct: 575 EEKRFCV-SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 589 MSDAFEFLNDALCRGI 604
           M  A E  ++   +G+
Sbjct: 634 MDQALEMRDEMKNKGV 649



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 176/407 (43%), Gaps = 20/407 (4%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E +S  +   ++   K    + A  +  +M+E G+       N  +    +   I E  E
Sbjct: 159 EVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKE 218

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M   G   +  +  +L+R  L   K  EA+ ++    E+    DS  + + +   C
Sbjct: 219 LYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACC 278

Query: 357 KNGYLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNA 398
           K   L  A  +L E++E                    +G + DA    + M   G  +N 
Sbjct: 279 KTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNV 338

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
               SL+ G  + + L +A+ LF +M  +G SP  V+++ LI    K     +A  F K+
Sbjct: 339 VAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKK 398

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  P +     +I G  + +K + ALKL  +  + G   +V + N ++  LC  GK
Sbjct: 399 MESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGK 457

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++ A +L   M+ R   PN+V+YN +M    +  + D A  +++++LE+ L+P+  +Y+I
Sbjct: 458 IDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSI 517

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            + G        +  E +N      I    + +  ++  +   G ++
Sbjct: 518 LIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTS 564



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           ++LV+     G ++N+   N L+N + +  + + A+ +  +M   G  P V   N  ++ 
Sbjct: 147 SNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSA 206

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L +     EA      M+  G   D  T  LL+    + +K   AL++  + +++G  PD
Sbjct: 207 LVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPD 266

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
             +Y++ +   C    +  A  L   MK K+ CVP+  TY +++    K G+ + A+   
Sbjct: 267 SLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWK 326

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + ++ + +  ++++    + G C  + +  A +        G  P ++T+ +L+     N
Sbjct: 327 DEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKN 386

Query: 622 G 622
           G
Sbjct: 387 G 387



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 42/83 (50%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K QF K  +    + +  + P+V  Y  VI G  + G+L  A  + DEM ++G+  +
Sbjct: 768 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 827

Query: 170 VVCYNILIDGFFKKGDYMRAKEI 192
              ++IL+ G   K   +RA  +
Sbjct: 828 GATFDILVSGKVGKFQPIRAASL 850


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 270/626 (43%), Gaps = 111/626 (17%)

Query: 32  PGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDK 91
           PG   +       +RRL     V  V   L+ + ++   C E   ++ + A+ +   PD+
Sbjct: 49  PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDR 108

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           AL  F R     GC         Q    +      W                 L ++  +
Sbjct: 109 ALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTW----------------ALCQNNRV 152

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  + DEM  +G                                      P+ VTY  
Sbjct: 153 GAARKMLDEMARKGCP------------------------------------PDDVTYAT 176

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +++ LCK  R DE  E+   M        + +Y + +  LC+   ++    V  +MV  G
Sbjct: 177 IVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRG 231

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
           +  + +TY  ++D FC+AG+++    +   M   GC  NVV++  L+RGL ++G+V +A+
Sbjct: 232 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 291

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +W  +  +     + ++ +LI GLC                    G L  A+S++N M+
Sbjct: 292 DMWRWMVAEGWAPSTVSYNILIRGLCS------------------VGDLKGASSILNSME 333

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +HGC  N  T ++L++GF +A  L  AI ++ +MSR GC P VV Y  +++  CK   F 
Sbjct: 334 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 393

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A S + +ML +   P+ +T++ LI  LC  +++  AL +  +  + G  P+   YN LI
Sbjct: 394 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 453

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           HGL   G   DAL + + M+      +LVTYNT++ GL +T    +A+     ++ + ++
Sbjct: 454 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 513

Query: 571 PD-----------------------------------IISYNITLKGLCSCSRMSDAFEF 595
           P+                                   I+ Y I +  LC+  ++ DA  +
Sbjct: 514 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 573

Query: 596 LNDALCRGILPTTITWHILVRAVMNN 621
           L   L  GI P T+TW++LVR V  N
Sbjct: 574 LLKMLYEGIYPNTVTWNVLVRGVFRN 599



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 211/497 (42%), Gaps = 34/497 (6%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           ++   +  L  +GD+ G      EM  RGV          +  F + G   RA + + R 
Sbjct: 57  AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116

Query: 197 VMETSVY----------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           V +              P+          LC+  R     +M D M +     D  TY +
Sbjct: 117 VHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYAT 176

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRK 305
            +  LCK   ++ A  V   M        A +YNA++   CR  +++E F +  +++GR 
Sbjct: 177 IVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRG 231

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV++Y  ++    + G++  A +I   +    C  +  T   L+ GL          
Sbjct: 232 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD-------- 283

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +GR+ DA  +   M   G   +  + N L+ G      L+ A  +   M 
Sbjct: 284 ----------DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 333

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           + GC P V +Y+TLI+G  K    G A S   +M   G KP+++ Y+ +++  C+    +
Sbjct: 334 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 393

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L  + L +   P+   +N LI  LC   +V  AL ++  M++  CVPN  TYN L+
Sbjct: 394 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 453

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GLF+ G+C  AL +   +    +   +++YN  + GLC      +A  F+   + +GI 
Sbjct: 454 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 513

Query: 606 PTTITWHILVRAVMNNG 622
           P   T+  ++ A    G
Sbjct: 514 PNAFTFSAIIHAYCKEG 530


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 289/584 (49%), Gaps = 42/584 (7%)

Query: 36  HSPHLFH--HIL----RRLIDPKL-VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSM 88
           HSP   H  +IL    RR+  P L +  V R+L     +    P+D + S+I  + K+  
Sbjct: 9   HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL-----KNGLGPDDFSYSLIYGFVKDGE 63

Query: 89  PDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            DKA  +F  M E      I  C + I  LC+ ++ +KA+  +  + + G+ PD+++Y  
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+GL KS  +  A  V ++M E G   N + YN LI G+   G +  +  +++++    
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS-SC 182

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN--VE 258
            V P V   N  I+ L K GR +E   ++D M     + D  +Y + +HG   A +  + 
Sbjct: 183 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 242

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
               ++  M+  GI  +   +N +I+ + R G + +   ++E M  KG + + V++  +I
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-----VE 372
             L   G++D+A+  +  + +         +G LI G C +G L KA ++++E     + 
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362

Query: 373 EGG-------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
             G             EGR+A+   +++ M + G + N  T NSLM G+     +E A  
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 422

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L   M+  G  P    Y TL++G CK  R  +A +  ++ML KG KP  + YS++++GL 
Sbjct: 423 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q+++   A K+  + ++ G T  +  Y +++ GLC     ++A  L   +   N   +++
Sbjct: 483 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 542

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           T+N ++  +FK G   +A E+++ I    L P+I +Y++ +  L
Sbjct: 543 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 240/497 (48%), Gaps = 24/497 (4%)

Query: 133 PDVYSYGTVINGL--VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P +++Y  +I+    V   DL   LA+   + + G+  +   Y+ LI GF K G+  +A 
Sbjct: 12  PTIHTYNILIDCYRRVHRPDL--GLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 68

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++  + ME  V P ++  N +I  LCK    D+   +  +M  +    D FTY   I G
Sbjct: 69  CLFLEM-MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           LCK+  ++ AERV  +MVE+G   +++TYN++I G+  +G   E   +++ M   G +  
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 311 VSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V   N  I  L ++G+ +EA  I++ +  K    D  ++  +++G               
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT------------ 235

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 +  LAD  ++ N M   G   N +  N L+N + +   ++ A+ +F++M  KG 
Sbjct: 236 ----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 291

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V++ T+I+ LC++ R  +A      M++ G  P    Y  LI G C   ++  A +
Sbjct: 292 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 351

Query: 490 LCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           L  + + K   P  V  ++ +I+ LC  G+V +   +   M +    PN+VT+N+LM+G 
Sbjct: 352 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 411

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G+ ++A  + + +    + P+   Y   + G C   R+ DA     D L +G+ PT+
Sbjct: 412 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 471

Query: 609 ITWHILVRAVMNNGAST 625
           + + I++  +     +T
Sbjct: 472 VLYSIILHGLFQARRTT 488



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 248/518 (47%), Gaps = 23/518 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L + GL PD +SY ++I G VK G++  A  +F EM E+GV   ++  N +I    K  +
Sbjct: 40  LLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 98

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A+ I +++V ++ + P++ TY+++I+GLCK    D+   + ++M +     +S TY 
Sbjct: 99  MDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYN 157

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S IHG   +G    + RV+++M   G+       N+ I    + G+  E   +++ M  K
Sbjct: 158 SLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLK 217

Query: 306 GC-LNVVSYNILIRG--LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           G   +++SY+ ++ G     +  + +  +I+ L+  K    +     +LIN   + G ++
Sbjct: 218 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 277

Query: 363 KAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           KA+ I  +++  G                  GRL DA    N M   G   +      L+
Sbjct: 278 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 337

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSY-NTLINGLCKVERFGEAYSFVKEMLEKGW 464
            G     +L  A  L  EM  K   P  V Y +++IN LCK  R  E    +  M++ G 
Sbjct: 338 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 397

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +P+++T++ L+ G C    ++ A  L       G  P+  +Y  L+ G C  G+++DAL 
Sbjct: 398 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 457

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           ++ +M  +   P  V Y+ ++ GLF+      A ++++ ++E      I +Y + L GLC
Sbjct: 458 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 517

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +   +A   L       +    IT++I++ A+   G
Sbjct: 518 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 555



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 258/548 (47%), Gaps = 35/548 (6%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           +P LF +  I+  L   K +    R+LE + ++    P  +   S+I  Y  + M ++++
Sbjct: 115 APDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 94  DVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            VF++M+       +  C + I  L +  +  +AK   +S+  KG KPD+ SY T+++G 
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 146 VKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             + D  L     +F+ M  +G+  N   +NILI+ + + G   +A  I+E +     + 
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMI 292

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ VT+  +I+ LC+ GR D+ L  ++ M           Y   I G C  G +  A+ +
Sbjct: 293 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 352

Query: 264 YREMVESGIFVDAVTY-NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
             EM+   I    V Y +++I+  C+ G++ E  ++ ++M + G   NVV++N L+ G  
Sbjct: 353 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 412

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G ++EA ++ + +       +   +G L++G CKNG                  R+ D
Sbjct: 413 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG------------------RIDD 454

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A ++   M   G K  +   + +++G  QA +   A  +F EM   G + ++ +Y  ++ 
Sbjct: 455 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 514

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+     EA   ++++     K D+IT++++I+ + +  +   A +L       G  P
Sbjct: 515 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 574

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  Y+++I  L      E+A  L+ +++K     +    N ++  L    +  KA    
Sbjct: 575 NIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 634

Query: 562 NHILEERL 569
           + I E  L
Sbjct: 635 SIIGENNL 642



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 18/393 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA      +  KG+ PD  ++ TVI+ L + G L  AL  F+ M + GV  +   Y  
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 335

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI G    G+ ++AKE+   ++ +    P V  ++ +IN LCK GR  E  ++ D M + 
Sbjct: 336 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 395

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
            +  +  T+ S + G C  GN+E A  +   M   GI  +   Y  ++DG+C+ G+I + 
Sbjct: 396 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 455

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             ++  M  KG     V Y+I++ GL +  +   A  ++  + E        T+GV++ G
Sbjct: 456 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 515

Query: 355 LCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLN 397
           LC+N   ++A  +L ++                      GR  +A  L + +  +G   N
Sbjct: 516 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 575

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T + ++   I+    E A  LF  + + G +      N ++  L       +A +++ 
Sbjct: 576 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 635

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
            + E     +  T SLL +   +  K    +KL
Sbjct: 636 IIGENNLTLEASTISLLASLFSREGKYREHIKL 668



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 9/229 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +++  Y KN   D AL VF+ M        + ++      L + R+   AK+  + + E 
Sbjct: 441 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 500

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G    +++YG V+ GL ++     A  + +++F   V+ +++ +NI+I   FK G    A
Sbjct: 501 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 560

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           KE+++  +    + PN+ TY++MI  L K   ++E   ++  ++K+    DS      + 
Sbjct: 561 KELFDA-ISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 619

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            L     V  A      + E+ + ++A T + +   F R GK +E  +L
Sbjct: 620 MLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 668


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 250/474 (52%), Gaps = 20/474 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R +QF     F   L   G+  ++Y+   +IN   +      A +V  ++ + G E +
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI G F +G    A  + +R+V E    P+VVTYN ++NG+C+ G     L++ 
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D FTY + I  LC+ G ++ A  +++EM   GI    VTYN+++ G C+A
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 290 GKIKE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  +    L +++ R+   NV+++N+L+   ++ GK+ EA  +++ +  +  + +  T+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L++G C                   + RL++A ++++ M ++ C  +  T  SL+ G+
Sbjct: 337 NTLMDGYCM------------------QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++++ + +F+ +S++G     V+Y+ L+ G C+  +   A    +EM+  G  PD+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY +L++GLC + K++ AL++     +      + MY  +I G+C  GKVEDA  L+ +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +  +   PN++TY  ++ GL K G   +A  +   + E+   P+  +YN  ++ 
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 238/471 (50%), Gaps = 20/471 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F EM       ++V ++       +   +    +  ++L +   +  N+ T N+MI
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMI 130

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+C +      +  ++ K   E D+ T+ + I GL   G V  A  +   MVE+G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            D VTYN++++G CR+G      +L   M  +    +V +Y+ +I  L  +G +D AIS+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  K   +   T+  L+ GLCK G  N                  D A L+  M   
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWN------------------DGALLLKDMVSR 292

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N  T N L++ F++  KL+ A  L+KEM  +G SP +++YNTL++G C   R  EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + +  M+     PD++T++ LI G C  K++D  +K+     ++G   +   Y+IL+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +GK++ A +L+  M     +P+++TY  L+DGL   G  +KALEI+  + + ++   
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I+ Y   ++G+C   ++ DA+       C+G+ P  +T+ +++  +   G+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 249/494 (50%), Gaps = 20/494 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +    + + ++      L    ++   G+  N+   NI+I+ F +      A  +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + VM+    P+  T+N +I GL   G+  E + + DRM +N  + D  TY S ++G+C
Sbjct: 146 LGK-VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           ++G+   A  + R+M E  +  D  TY+ +ID  CR G I     L++ M  KG   +VV
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN L+RGL + GK ++   + + +  +    +  T  VL++   K              
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK-------------- 310

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+L +A  L   M   G   N  T N+LM+G+   ++L  A  +   M R  CSP
Sbjct: 311 ----EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V++ +LI G C V+R  +     + + ++G   + +TYS+L+ G CQS KI +A +L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G  PDV  Y IL+ GLC  GK+E AL+++ +++K      +V Y T+++G+ K 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A  ++  +  + ++P++++Y + + GLC    +S+A   L      G  P   T+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 612 HILVRAVMNNGAST 625
           + L+RA + +G  T
Sbjct: 547 NTLIRAHLRDGDLT 560



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 226/458 (49%), Gaps = 20/458 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A   L  + + G +PD  ++ T+I GL   G +  A+ + D M E G + +VV YN +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  + GD   A ++  ++  E +V  +V TY+ +I+ LC+ G  D  + ++  M+    +
Sbjct: 202 GICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
               TY S + GLCKAG       + ++MV   I  + +T+N ++D F + GK++E  EL
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           ++ M  +G   N+++YN L+ G     ++ EA ++ +L+    C+ D  T   LI G C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
              ++  +++   + + G                  G++  A  L   M  HG   +  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L++G     KLE A+ +F+++ +      +V Y T+I G+CK  +  +A++    + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG KP+++TY+++I+GLC+   +  A  L  +  + G  P+   YN LI      G + 
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            + +L   MK      +  +   ++D L  +G+ DK+ 
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKSF 597



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 197/405 (48%), Gaps = 55/405 (13%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET- 168
           +CR      A   L  + E+ +K DV++Y T+I+ L + G +  A+++F EM  +G+++ 
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262

Query: 169 ----------------------------------NVVCYNILIDGFFKKGDYMRAKEIWE 194
                                             NV+ +N+L+D F K+G    A E+++
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            ++    + PN++TYN +++G C   R  E   M D M +N+   D  T+ S I G C  
Sbjct: 323 EMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             V+   +V+R + + G+  +AVTY+ ++ GFC++GKIK   EL++ M   G L +V++Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            IL+ GL +NGK+++A+ I+E L++   +     +  +I G+CK                
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG--------------- 486

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G++ DA +L   +   G K N  T   +++G  +   L  A  L ++M   G +P  
Sbjct: 487 ---GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +YNTLI    +      +   ++EM   G+  D  +  ++I+ L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 38/292 (13%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING------LVKSGDLL---------- 152
           +  ++ + ++A      +  +G+ P++ +Y T+++G      L ++ ++L          
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 153 -------------------GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
                                + VF  + +RG+  N V Y+IL+ GF + G    A+E++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + +V    V P+V+TY ++++GLC  G+ ++ LE+++ ++K++ +     Y + I G+CK
Sbjct: 427 QEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVS 312
            G VE A  ++  +   G+  + +TY  MI G C+ G + E   L   M   G   N  +
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           YN LIR  L +G +  +  + E ++    +AD+++  ++I+ L  +G L+K+
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 247/480 (51%), Gaps = 22/480 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M +RG + +VV Y +L++   K   +  A  + + +  +    PN+VTYNV+ING+C+ G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREG 236

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           R D+  E+ +R+     + D  +Y + + GLC A   +  + ++ EMV+     + VT++
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++  FCR G ++   ++ + M + GC  N    NI+I  + + G+VD+A      +   
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
            CN D+ ++  ++ GLC+ G    A ++L E+                     +G +  A
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+  M ++GC +   T N+L++GF    ++++A+ LF  +    C P  ++Y TL+ G
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTG 473

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC  ER   A   + EM++K    + +T+++L++  CQ   ++ A++L  Q ++ G TP+
Sbjct: 474 LCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 533

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  +N L+ G+      E+AL+L   +  +    + +TY++++D L +    ++A+++ +
Sbjct: 534 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 593

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + +  +RP +  YN  L  LC       A +F    +  G +P   T+ IL+  + + G
Sbjct: 594 AVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 653



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 243/492 (49%), Gaps = 34/492 (6%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
           P  V  +V+ +A  K+S   +A++V   M    GC   I         +CR+ + + AK 
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAKE 243

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            LN L   G +PD+ SY TV+ GL  +        +F EM ++    N V +++L+  F 
Sbjct: 244 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G   RA ++ +++  +    PN    N++IN +CK GR D+  +  + M       D+
Sbjct: 304 RGGMVERAIQVLQQM-SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 362

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            +Y + + GLC+AG  E A+ +  EMV      + VT+N  I   C+ G I++  +L E+
Sbjct: 363 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 422

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   GC + +V+YN L+ G    G+VD A+   EL     C  ++ T+  L+ GLC    
Sbjct: 423 MPEYGCSVGIVTYNALVHGFCVQGRVDSAL---ELFNNLPCEPNTITYTTLLTGLCH--- 476

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                            RL  AA L+  M +  C LNA T N L++ F Q   +E A+ L
Sbjct: 477 ---------------AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMEL 521

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             +M   GC+P ++++NTL++G+ K     EA   +  ++ KG   D ITYS +++ L +
Sbjct: 522 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSR 581

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             + + A+++       G  P V MYN ++  LC   + + A+  ++ M    C+PN  T
Sbjct: 582 EDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNEST 641

Query: 541 YNTLMDGLFKTG 552
           Y  L++GL   G
Sbjct: 642 YIILIEGLAHEG 653



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 249/500 (49%), Gaps = 22/500 (4%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           +++ ++G +P V +Y  ++  + KS     A+ V DEM  +G   N+V YN++I+G  ++
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G    AKEI  RL       P++V+Y  ++ GLC   R+D+   ++  M   +   +  T
Sbjct: 236 GRVDDAKEILNRL-SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           +   +   C+ G VE A +V ++M + G   +    N +I+  C+ G++ + ++    MG
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             GC  + +SY  ++RGL   G+ + A  +   +  KNC  +  T    I  LC+ G + 
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 363 KAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +AI+++  + E G                 +GR+  A  L N +    C+ N  T  +L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLL 471

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            G   A +L+ A  L  EM +K C    V++N L++  C+     EA   V +M+E G  
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++IT++ L++G+ +    + AL+L    + KG + D   Y+ ++  L    + E+A+Q+
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQM 591

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              ++     P +  YN ++  L K  + D+A++ + +++     P+  +Y I ++GL  
Sbjct: 592 LHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 651

Query: 586 CSRMSDAFEFLNDALCRGIL 605
              + +A   L++   +G+L
Sbjct: 652 EGLLKEARYVLSELYAKGVL 671



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 69/126 (54%)

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           C   LQ+G  P V  Y +L+  +C +    +A+ +   M+ + C PN+VTYN +++G+ +
Sbjct: 175 CSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 234

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D A EI N +     +PDI+SY   LKGLC+  R  D      + + +  +P  +T
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 611 WHILVR 616
           + +LVR
Sbjct: 295 FDMLVR 300


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 266/544 (48%), Gaps = 34/544 (6%)

Query: 43  HILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI 102
           ++L R I         R    +   K +  +D  LS  +   K+  P   + VF ++   
Sbjct: 7   YVLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKH--PPPPIFVFDKL--- 61

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
                G + R   +  A    + L  KG+ P + +   +IN       L  A ++   + 
Sbjct: 62  ----LGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTIL 117

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNVMINGLCKCGR 221
           + G + N+V +N LI+GF   G  M +K +  RL +    YP +  +Y  +INGLCK G+
Sbjct: 118 KMGFQPNMVTFNTLINGFCING--MVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQ 175

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
             + L++  +M+++    +  TY + I GLCK   +  A R++  +   GI VD V YN+
Sbjct: 176 TRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNS 235

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCLNV--VSYNILIRGLLENGKVDEAISIWELLREK 339
           +I G C  G+ +E   L  +M R G +N    ++NIL+  L + G++ EA  ++ ++ ++
Sbjct: 236 LIHGCCSVGQWREATRLLTMMVR-GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D  T+  L+ G C          + N V E  E        L NRM K G + +  
Sbjct: 295 GEKPDIVTYNALMEGFC----------LSNNVSEARE--------LFNRMVKRGLEPDVL 336

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N L+NG+ +   ++ A+ LFKE+  K   P + +YN+LI+GLCK+ R       V EM
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            ++G  PD++TY++ ++  C+SK  + A+ L  Q +Q G  PD  MY++++   C   K+
Sbjct: 397 CDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKL 455

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A +   ++    C PN+ TY  +++ L K    D+A+ + + + +    PD +++   
Sbjct: 456 KIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETI 515

Query: 580 LKGL 583
           +  L
Sbjct: 516 IGAL 519



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 211/443 (47%), Gaps = 22/443 (4%)

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRF---DECLEMWDRMKKNEREKDSFTYCSFIHG 250
            R V+  S++    + +V   G     +F   D+ L  ++RM +       F +   +  
Sbjct: 5   SRYVLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGA 64

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           + + G+   A  ++ ++   GI     T   +I+ +C    +   F L   + + G   N
Sbjct: 65  IVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPN 124

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V++N LI G   NG V +A++    L  K    D  ++G LINGLCKNG    A+Q+L 
Sbjct: 125 MVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQ 184

Query: 370 EVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           ++EE                   +  +ADA  L + +   G  ++    NSL++G     
Sbjct: 185 KMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVG 244

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +   A  L   M R   +P   ++N L++ LCK  R  EA      M+++G KPD++TY+
Sbjct: 245 QWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYN 304

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L+ G C S  +  A +L  + +++G  PDV  YN+LI+G C    V++A+ L+  ++ +
Sbjct: 305 ALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK 364

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           N VPNL TYN+L+DGL K G      E+ + + +    PDI++YNI L   C       A
Sbjct: 365 NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKA 424

Query: 593 FEFLNDALCRGILPTTITWHILV 615
                  + +GI P    + ++V
Sbjct: 425 ISLFRQ-IVQGIWPDFYMYDVIV 446



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 241/528 (45%), Gaps = 43/528 (8%)

Query: 16  KNPHTALALFD----SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYC 71
           K+P   + +FD    +  R   Y  +  LF  +  + I P        I  L  +  CYC
Sbjct: 49  KHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPS-------IATLTILINCYC 101

Query: 72  PE---DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
            +     A S++    K          FQ     F       C      KA  F   L  
Sbjct: 102 HQAHLSFAFSLLGTILKMG--------FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA 153

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG   D +SYG++INGL K+G    AL +  +M E  V  N++ Y+ +IDG  K      
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIAD 213

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++  LV    +  +VV YN +I+G C  G++ E   +   M +     D +T+   +
Sbjct: 214 ALRLFS-LVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILV 272

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
             LCK G +  A+ V+  M++ G   D VTYNA+++GFC +  + E  EL+  M ++G  
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V++YN+LI G  +   VDEA+ +++ +R KN   +  T+  LI+GLCK          
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK---------- 382

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                    GR++    LV+ M   G   +  T N  ++ F ++   E AI LF+++  +
Sbjct: 383 --------LGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-Q 433

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P    Y+ ++   CK E+   A   ++ +L  G  P++ TY+++IN LC+    D A
Sbjct: 434 GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEA 493

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           + L  +       PD   +  +I  L    + + A +L   M +R  V
Sbjct: 494 MTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 130/263 (49%)

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           + ++ ++    +       + D     NRM +       +  + L+   ++      AI 
Sbjct: 17  FFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAIS 76

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF ++  KG +P++ +   LIN  C       A+S +  +L+ G++P+M+T++ LING C
Sbjct: 77  LFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFC 136

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            +  +  A+      + KG+  D   Y  LI+GLC  G+  DALQL   M++    PNL+
Sbjct: 137 INGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLI 196

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY+T++DGL K      AL +++ +    +  D+++YN  + G CS  +  +A   L   
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
           +   I P   T++ILV A+   G
Sbjct: 257 VRGNINPDDYTFNILVDALCKEG 279


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 224/427 (52%), Gaps = 23/427 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     +KA   L  + E G++P+V  Y  ++ G  K+G       VF+EM  RG+E +
Sbjct: 158 LCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPD 217

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LID   ++G   +A ++ +++ ME  + PNVVTYNV+IN +CK G   E + + 
Sbjct: 218 VVMYTGLIDSLCREGKVKKATQVMDKM-MERGLEPNVVTYNVLINSMCKEGSVKEAMSLR 276

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA--VTYNAMIDGFC 287
           + M +     D+ TY + I GL     ++ A  +  EM+     V+   VT+N++I G C
Sbjct: 277 NNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLC 336

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G++++ F++ ++M   GC  N+V++N+LI GLL   KV +A+ + + +       DS 
Sbjct: 337 KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +LING CK   +++A                   SL+++M + G +        L+ 
Sbjct: 397 TYSILINGFCKMWQVDRA------------------ESLLSKMRRDGIEPELVHYIPLLA 438

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +   +E A   F EM  K C   VV+Y+T+I+G C++     A  F+K ML++G  P
Sbjct: 439 ALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIP 497

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D +TYS+LIN    S  +  A ++  Q    GF PDV +++ LI G  + G  E  L+L 
Sbjct: 498 DSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557

Query: 527 SNMKKRN 533
             M  ++
Sbjct: 558 REMTAKD 564



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 232/484 (47%), Gaps = 19/484 (3%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D  SY TV+  L + G  L A      +         V Y  L+     +    +A  + 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            R +  + V P+VVTY  +I GLC     D+ +E+   M ++  E +   Y   + G CK
Sbjct: 137 -RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
           AG  E   +V+ EM   GI  D V Y  +ID  CR GK+K+  ++ + M  +G   NVV+
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN+LI  + + G V EA+S+   + EK    D+ T+  LI GL     +++A+ +L E+ 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
            G                +   + N  T NS+++G  +  ++  A  +   M+  GC+  
Sbjct: 316 HG----------------ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACN 359

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           +V++N LI GL +V +  +A   + EM   G +PD  TYS+LING C+  ++D A  L  
Sbjct: 360 LVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLS 419

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  + G  P++  Y  L+  LC  G +E A   +  M K NC  ++V Y+T++ G  +  
Sbjct: 420 KMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLR 478

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           D   A E   H+L+E L PD ++Y++ +    +   +  A   L      G +P    + 
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFD 538

Query: 613 ILVR 616
            L++
Sbjct: 539 SLIK 542



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 240/458 (52%), Gaps = 23/458 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +R+  +A   L  +   G++PDV +YGT+I GL  + D+  A+ +  EM E G+E N
Sbjct: 123 LCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPN 182

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ L+ G+ K G +    +++E +     + P+VV Y  +I+ LC+ G+  +  ++ 
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEEMSGR-GIEPDVVMYTGLIDSLCREGKVKKATQVM 241

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+M +   E +  TY   I+ +CK G+V+ A  +   M+E G+ +DAVTYN +I G    
Sbjct: 242 DKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGV 301

Query: 290 GKIKECFELWEVMGRKGCL---NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            ++ E   L E M     +   NVV++N +I GL + G++ +A  + +++ E  C  +  
Sbjct: 302 LEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLV 361

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T  +LI GL +   + KA+++++E                  M   G + +++T + L+N
Sbjct: 362 TFNLLIGGLLRVHKVKKAMELMDE------------------MASSGLEPDSFTYSILIN 403

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +  +++ A  L  +M R G  P +V Y  L+  LC+     +A +F  EM  K  K 
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKL 462

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D++ YS +I+G C+ +    A +     L +G  PD   Y++LI+   ++G +  A ++ 
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             M     VP++  +++L+ G    GD +K LE+   +
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 232/459 (50%), Gaps = 27/459 (5%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           + V YN ++    ++G  + A     R VM     P  V+Y  ++  LC   R  + + +
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLR-VMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M+ +    D  TY + I GLC A +V+ A  + REM ESGI  + V Y+ ++ G+C+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 289 AGK---IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           AG+   + + FE  E+ GR    +VV Y  LI  L   GKV +A  + + + E+    + 
Sbjct: 196 AGRWECVSKVFE--EMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ VLIN +CK                  EG + +A SL N M + G  L+A T N+L+
Sbjct: 254 VTYNVLINSMCK------------------EGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295

Query: 406 NGFIQASKLENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            G     +++ A+ L +EM        P VV++N++I+GLCK  R  +A+     M E G
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              +++T++LLI GL +  K+  A++L  +    G  PD   Y+ILI+G C   +V+ A 
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L S M++    P LV Y  L+  L + G  ++A   ++  + +  + D+++Y+  + G 
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE-MHKNCKLDVVAYSTMIHGA 474

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C       A EFL   L  G++P ++T+ +L+    N+G
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSG 513



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 201/436 (46%), Gaps = 35/436 (8%)

Query: 90  DKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           DKA+++ + M E        ++ C     C+  ++E   +    +  +G++PDV  Y  +
Sbjct: 165 DKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGL 224

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           I+ L + G +  A  V D+M ERG+E NVV YN+LI+   K+G    A  +   + +E  
Sbjct: 225 IDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM-LEKG 283

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEG 259
           V  + VTYN +I GL      DE + + + M   E   E +  T+ S IHGLCK G +  
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A +V   M E+G   + VT+N +I G  R  K+K+  EL + M   G   +  +Y+ILI 
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G  +  +VD A S+   +R      +   +  L+  LC+ G + +A    +E+ +     
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK----- 458

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                          CKL+    +++++G  +    ++A    K M  +G  P  V+Y+ 
Sbjct: 459 --------------NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN        G A   +K+M   G+ PD+  +  LI G       +  L+L  +   K 
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564

Query: 499 FTPD----VTMYNILI 510
              D     T+Y  L+
Sbjct: 565 IALDSKIISTIYTCLV 580



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 38/223 (17%)

Query: 431 PTV---VSYNTLINGLCKV-----------------------------------ERFGEA 452
           P+V   VSYNT++  LC+                                     R G+A
Sbjct: 73  PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA 132

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              +++M   G +PD++TY  LI GLC +  +D A++L  +  + G  P+V +Y+ L+ G
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C AG+ E   +++  M  R   P++V Y  L+D L + G   KA ++ + ++E  L P+
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++YN+ +  +C    + +A    N+ L +G+    +T++ L+
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%)

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           V + V+YNT++  L + G C  A      ++    RP  +SY   ++ LC+  R   A  
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 595 FLNDALCRGILPTTITWHILVRAV 618
            L D    G+ P  +T+  L+R +
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGL 158


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 231/485 (47%), Gaps = 51/485 (10%)

Query: 182 KKGDYMRAKE--IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
            +G   RA+   ++ R+V    V P   T+ V    LC+ GR DE L +   M ++    
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D+  Y + IH LC  G V  A  +  EM+  G   D  T++ ++ G C  G+++E   L 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 300 EVMGRKGC--------------------------------LNVVSYNILIRGLLENGKVD 327
           + M  KGC                                LNVV +N +I G L  GK+ 
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLA 312

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           EA  ++E +  K C  D+ T+ +L++GLCK G +  A+++L E+E+ G            
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 G   D  +L+  M   G  LN+   N ++    +  +++ A+ L +EM  +GC+
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P + SYNT+I  LC  E+  EA    + +LE+G   + ITY+ +I+ L +  +   A++L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + +  G + DV  YN LI  +C  G V+ +L L   M ++   PN V+YN L+  L K
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                 ALE+   +L + L PDI++YN  + GLC    M  A   L       + P  IT
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612

Query: 611 WHILV 615
           ++IL+
Sbjct: 613 YNILI 617



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 223/481 (46%), Gaps = 50/481 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG  A  LCR  + ++A   L  +   G  PD   Y TVI+ L   G +  A  + +EM 
Sbjct: 162 FGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML 221

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC--- 219
             G   +V  ++ ++ G    G    A  + +R+ M     P V+TY  ++ GLC+    
Sbjct: 222 LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM-MTKGCMPGVMTYGFLLQGLCRVRQA 280

Query: 220 ----------------------------GRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
                                       G+  E  E+++ M     + D+ TY   +HGL
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNV 310
           CK G +  A R+ REM + G   + VTY  ++  FC+ G   +   L E M  KG  LN 
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 400

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-N 369
             YN +I  L ++G++DEA+ + + +R + CN D  ++  +I  LC N  + +A  +  N
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 460

Query: 370 EVEEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            +EEG                 +GR  DA  L   M  HGC L+  + N L+    +   
Sbjct: 461 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 520

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ ++ L +EM+ KG  P  VSYN LI+ LCK  R  +A    K+ML +G  PD++TY+ 
Sbjct: 521 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 580

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LINGLC+   +  AL L  +   +   PD+  YNILI   C    ++DA  L +      
Sbjct: 581 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 640

Query: 534 C 534
           C
Sbjct: 641 C 641



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P    + +    LC  G+ ++AL L   M +  CVP+ V Y T++  L   G   +A  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            N +L      D+ +++  ++G+C   R+ +A   ++  + +G +P  +T+  L++ +
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 296/624 (47%), Gaps = 65/624 (10%)

Query: 1   MVISAKRLLNLLKAEKNPH-TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-S 58
           M  + + L+ L K  K+P   AL+LF S+  + G+ H+      IL  LI   L  H  S
Sbjct: 1   MAQTQQALILLPKMVKSPPLKALSLFTSSALQ-GFQHTHQSISFILHLLISSNLFSHSQS 59

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
            +L+LI  Q        + +    + + + P   LD F     I         R +  E+
Sbjct: 60  LLLKLISGQ----ISSSSFTPSSLFHELTQPH--LDSFPTHVLIHEAIINAHVRSQLPEQ 113

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A  + N +  +GL P   ++  ++  L+KS     A  VF+E                  
Sbjct: 114 ALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE------------------ 155

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
               KG+                V  +V ++ +MI G C+ G  D+  E+  +M++    
Sbjct: 156 ---TKGN----------------VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLS 196

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +   Y + I G CK G++E  ++++ +M E  +  +  TY  +I+GF + G  K+  EL
Sbjct: 197 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL 256

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +E M   G + NV +YN +I     +GK++ A  +++ +RE+    +  T+  LI GLC+
Sbjct: 257 YEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ 316

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                             E R+ +A  L+ RM + G   N  + N+L++G+     L+ A
Sbjct: 317 ------------------ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 358

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LF +M   G SP++ +YN LI G  + +        V+EM  +G  P  +TY++L++ 
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 418

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           L +S  I+ A ++     + G   D+ +Y +LIHGLC  G +++A +L+ ++ + +  PN
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            V YNT++ G  K G   +AL +   + E  + P++ SYN T++ LC   + ++A   L 
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538

Query: 598 DALCRGILPTTITWHILVRAVMNN 621
           D +  G+ P+   W+++ +A  +N
Sbjct: 539 DMIELGLKPSISIWNMISKARFDN 562



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 194/421 (46%), Gaps = 20/421 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V+ +  +IN   +    ++ L  +++M        S T+ + +  L K+   E A RV+
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLEN 323
            E  +  + +D  ++  MI G C  G + + FE+   M   G   NVV Y  LI G  +N
Sbjct: 154 NE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G ++    ++  + E +  A+  T+ VLING  K G L K                 D  
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMG-LKK-----------------DGI 254

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  +M   G   N YT NS++       KL NA  LF EM  +G +  VV+YNTLI GL
Sbjct: 255 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 314

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+  R  EA   +  M   G  P++I+Y+ LI+G C    +D A  L  Q    G +P +
Sbjct: 315 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 374

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNILI G   A        +   M+ R   P+ VTY  LMD L ++ + +KA +I++ 
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +  L  DI  Y + + GLC    M +A +         + P  + ++ ++      G+
Sbjct: 435 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 494

Query: 624 S 624
           S
Sbjct: 495 S 495



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F   V ++  +I+    +   E AL  ++ M  R  VP   T+N L+  L K+   +KA 
Sbjct: 91  FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++N   +  ++ D+ S+ I +KG C    +   FE L      G+ P  + +  L+   
Sbjct: 151 RVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209

Query: 619 MNNG 622
             NG
Sbjct: 210 CKNG 213


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 257/566 (45%), Gaps = 63/566 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  +  K+ R  +++   G+  DVY+Y T IN   K G +  A+ +F +M E GV  N
Sbjct: 216 LVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPN 275

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN LIDG  K G    A     R+V E  V P++VTY +++NGL K  +FDE   + 
Sbjct: 276 VVTYNNLIDGLCKSGRLEEALMFKGRMV-ENKVNPSLVTYGILVNGLVKFEKFDEANSVL 334

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       + F + + I G  + GN++ A RV  +M   G+  +AVT+N ++ GFCR 
Sbjct: 335 VEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRT 394

Query: 290 GKIKECFELWEVMGRKGCLNVVSYN----------------------------------- 314
            ++++  ++ E +      NV+S N                                   
Sbjct: 395 NQMEQAEQVLEYL----LSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVN 450

Query: 315 -----ILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
                +L+ GL + GK  EAI +W  L  +K   A++TT   L+ GLC+ G + +   + 
Sbjct: 451 DSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVC 510

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E+ E G                  G++ +A  L  +M K G K + YT N LM G    
Sbjct: 511 KEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADK 570

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K+++   +  E    G  P + +Y  ++ G C  +R   A S   +++    +   + Y
Sbjct: 571 GKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVY 630

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++LI    ++     A KL          P +  Y+ +IHG+C    VE+A  ++  M+ 
Sbjct: 631 NILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRN 690

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              +PN+  Y  L+ G  K G  D+   I   +    ++P+ I+Y I + G C      +
Sbjct: 691 EGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKE 750

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
           A + LN+ +  GI P T+T+ +L + 
Sbjct: 751 ATKLLNEMIANGISPDTVTYTVLQKG 776



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 263/546 (48%), Gaps = 32/546 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           + I AY K    D+A+ +F +M E         +      LC+  + E+A  F   + E 
Sbjct: 246 TAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVEN 305

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P + +YG ++NGLVK      A +V  EM+ +G   N   +N LIDG+ +KG+   A
Sbjct: 306 KVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDA 365

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI- 248
             + + + ++  + PN VT+N ++ G C+  + ++  ++ + +  N    +    CS++ 
Sbjct: 366 LRVRDDMTLK-GLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNE-DACSYVL 423

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           H LCK+   + A ++ + ++   I V+      ++ G C+ GK  E  +LW  +  K  L
Sbjct: 424 HLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGL 483

Query: 309 --NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N  + N L+ GL E G ++E   + + + E+    D  ++  LI G CK+G + +A +
Sbjct: 484 AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK 543

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +  ++ + G                 +G++ D   +++    HG   N YT   ++ G+ 
Sbjct: 544 LKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYC 603

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A +++NA+ LF ++       + V YN LI    K   F EA+     M      P + 
Sbjct: 604 NADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIF 663

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TYS +I+G+C +  ++ A  +  +   +G  P+V  Y  LI G C  G+++    +   M
Sbjct: 664 TYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEM 723

Query: 530 KKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
              NC+ PN +TY  ++DG  K G+  +A ++ N ++   + PD ++Y +  KG C  + 
Sbjct: 724 TS-NCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENE 782

Query: 589 MSDAFE 594
           + +  +
Sbjct: 783 LEETLQ 788



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 244/515 (47%), Gaps = 24/515 (4%)

Query: 109 ILCRKRQ---FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
           ILC + Q   F  A         KG+ P + S   +++ LVKS +L  +  VFD M   G
Sbjct: 177 ILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGG 236

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
           V  +V  Y   I+ + K G    A  ++ ++  E  V PNVVTYN +I+GLCK GR +E 
Sbjct: 237 VLIDVYTYATAINAYCKGGKIDEAVGLFLKM-GEGGVLPNVVTYNNLIDGLCKSGRLEEA 295

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           L    RM +N+      TY   ++GL K    + A  V  EM   G   +   +NA+IDG
Sbjct: 296 LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDG 355

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           + R G + +   + + M  KG   N V++N L++G     ++++A  + E L     + +
Sbjct: 356 YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVN 415

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
                 +++ LCK+   + A++I                  V  +     K+N      L
Sbjct: 416 EDACSYVLHLLCKSSKFDSALKI------------------VKALLLRNIKVNDSLLTLL 457

Query: 405 MNGFIQASKLENAIFL-FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           + G  +  K   AI L F+   +KG +    + N L+ GLC+     E +   KEM+E+G
Sbjct: 458 VCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERG 517

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D I+Y+ LI G C+S KI+ A KL  + +++GF PD   YN L+ GL   GK++D  
Sbjct: 518 LVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++    K    VPN+ TY  +++G       D A+ ++N ++  ++    + YNI +   
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAH 637

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
                 ++AF+  +      I PT  T+  ++  +
Sbjct: 638 SKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGM 672



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 55/440 (12%)

Query: 241 SFTYCSFI-HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           S   C+F+   L K+  +  + RV+  M   G+ +D  TY   I+ +C+ GKI E   L+
Sbjct: 205 SLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLF 264

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             MG  G L NVV+YN LI GL ++G+++EA+     + E   N    T+G+L+NGL K 
Sbjct: 265 LKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKF 324

Query: 359 GYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTC 401
              ++A  +L E+   G                 +G + DA  + + M   G K NA T 
Sbjct: 325 EKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTH 384

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML- 460
           N+L+ GF + +++E A  + + +     S    + + +++ LCK  +F  A   VK +L 
Sbjct: 385 NTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLL 444

Query: 461 -----------------------------------EKGWKPDMITYSLLINGLCQSKKID 485
                                              +KG   +  T + L+ GLC+   ++
Sbjct: 445 RNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNME 504

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
               +C + +++G   D   YN LI G C +GK+E+A +L   M K+   P+  TYN LM
Sbjct: 505 EVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLM 564

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            GL   G  D    + +   +  + P+I +Y + L+G C+  R+ +A    N  +   + 
Sbjct: 565 KGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVE 624

Query: 606 PTTITWHILVRAVMNNGAST 625
            + + ++IL+ A    G  T
Sbjct: 625 LSYVVYNILIAAHSKAGNFT 644



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 153/339 (45%), Gaps = 42/339 (12%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA---------DSTTHGVLINGLCKN 358
             V SY ILIR LL +  +  A    + L E N N                 L  G   +
Sbjct: 109 FTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLSEIASAFLELGERSH 168

Query: 359 GYLNKAIQIL-NEVEEGGEGRLADA--------------------ASLVNRMDKH----- 392
           G L+  I IL ++ +  G     D                     +SLV   + H     
Sbjct: 169 GELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRV 228

Query: 393 -------GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
                  G  ++ YT  + +N + +  K++ A+ LF +M   G  P VV+YN LI+GLCK
Sbjct: 229 FDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCK 288

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R  EA  F   M+E    P ++TY +L+NGL + +K D A  +  +   KGF+P+  +
Sbjct: 289 SGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFV 348

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           +N LI G    G ++DAL++  +M  +   PN VT+NTL+ G  +T   ++A ++  ++L
Sbjct: 349 FNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL 408

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
              L  +  + +  L  LC  S+   A + +   L R I
Sbjct: 409 SNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNI 447



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-NE-----IFGCEA--GILCRKRQFEKAKRFLNSLWEK 129
           S+I     N + ++A  +F+ M NE     +F   A  G  C+  Q ++ +  L  +   
Sbjct: 667 SIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSN 726

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            ++P+  +Y  +I+G  K G+   A  + +EM   G+  + V Y +L  G      Y + 
Sbjct: 727 CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG------YCKE 780

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGL 216
            E+ E L  +T+V    +TY  +++ L
Sbjct: 781 NELEETLQGDTAVPLEEITYTTLVDKL 807


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 162/641 (25%), Positives = 298/641 (46%), Gaps = 84/641 (13%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           ++F+ +LR+ + P +  + +                    +I  Y +N   D+A  V   
Sbjct: 355 YIFNQMLRQSLKPSVATYTA--------------------LIDGYCRNGRTDEARRVLYE 394

Query: 99  MNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG------DLL 152
           M +I G       R R+  KAK+ L  +   G+ PDV +Y  +ING+ K G      ++L
Sbjct: 395 M-QITGV------RPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 447

Query: 153 G-----------------------------ALAVFDEMFERGVETNVVCYNILIDGFFKK 183
                                         AL  F +++  G+  N V +N L+  F+++
Sbjct: 448 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 507

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G    A++ +++ +    +  +V ++N +I+  C+ G   E   ++D M ++    D  T
Sbjct: 508 GMIAEAEQ-FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 566

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y S + GLC+ G++  A+     ++E    +D  T N ++ G C+ G + E  +L E M 
Sbjct: 567 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 626

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +  L +  +Y IL+ G  + GK+  A+ + +++ EK    D+  +  L+NGL   G + 
Sbjct: 627 TRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 686

Query: 363 KAIQILNEV--EEG----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
            A  +  E+  +EG                  G++ +   L+  M ++    ++ + N L
Sbjct: 687 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 746

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML--EK 462
           M+G+I+  +L   ++L+++M ++G  P  V+Y  LI GLC+      A  F+++M+  E 
Sbjct: 747 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEES 806

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G +P    Y  LIN  C+   ID A +L       G  P     + ++ GLC  GKVE+A
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           + ++S++ +   VP + T+ TLM GL K    D A  +   +    L+ D+++YN+ + G
Sbjct: 867 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 926

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           LC+   + DA +   +   +G+LP   T+  L  A+   G 
Sbjct: 927 LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 967



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/646 (26%), Positives = 274/646 (42%), Gaps = 61/646 (9%)

Query: 21  ALALFDSATREPGYAHSPHLF---HHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
           AL + DS  ++ G     H++    HIL +   P   + V R L L     C       L
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFS-CSAIFSSLL 149

Query: 78  SVIQAYGKNSM--PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
             I      ++   D  ++ + +  ++    A I            F++   E G K  +
Sbjct: 150 RTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIF-----------FMD---ECGFKASL 195

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           +S   ++N LV             E  +R    +V   NI+++    +G   +A+ + ++
Sbjct: 196 FSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQK 255

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             M+    PN VTYN ++N   K GR    L + D M+KN  E D +TY   I  LCK  
Sbjct: 256 --MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLK 313

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
               A  + + M E  +  D  +YN +I GF   GKI     ++  M R+    +V +Y 
Sbjct: 314 RSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYT 373

Query: 315 ILIRGLLENGKVDEA--------------------ISIWELLREKNCNADSTTHGVLING 354
            LI G   NG+ DEA                      I + +     + D  T+  LING
Sbjct: 374 ALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALING 433

Query: 355 LCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLN 397
           +CK G +++  +IL+ +++ G                  G   +A      + + G   N
Sbjct: 434 MCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVAN 493

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           +   N+L+  F +   +  A    + MSR   S  V S+N +I+  C+     EA+S   
Sbjct: 494 SVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYD 553

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+  GW PD+ TY  L+ GLCQ   +  A +     L+K    D    N L+ G+C  G
Sbjct: 554 NMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHG 613

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            +++AL L   M  RN +P+  TY  L+DG  K G    AL +   +LE+ L PD I+Y 
Sbjct: 614 TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYT 673

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNNG 622
             L GL +  ++  A     + +C+ G+    I ++ ++   +  G
Sbjct: 674 CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 719



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 232/474 (48%), Gaps = 23/474 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F C     C++    +A    +++   G  PD+ +YG+++ GL + G L+ A      + 
Sbjct: 532 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 591

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+    +    N L+ G  K G    A ++ E++V   ++ P+  TY ++++G CK G+ 
Sbjct: 592 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR-NILPDTYTYTILLDGFCKRGKI 650

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFVDAVTYNA 281
              L +   M +     D+  Y   ++GL   G V+ A  +++E++ + G++ D + YN+
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           M++G+ + G+I E   L   M       +  SYNIL+ G ++ G++   + ++  + ++ 
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 770

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNE--VEEGGEGRLADAASLVNRMDKHGCKLNA 398
              D+ T+ +LI GLC+ G +  A++ L +  +EE G               KH   +  
Sbjct: 771 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESG------------LQPKHTHYI-- 816

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
               +L+N   +   ++ A  L ++M   G  P+ V+ ++++ GLCK  +  EA      
Sbjct: 817 ----ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 872

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           ++  G  P + T++ L++GLC+  KID A  L       G   DV  YN+LI GLC+   
Sbjct: 873 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKC 932

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           + DAL LY  MK +  +PN+ TY TL   ++ TG      ++   I +  + P 
Sbjct: 933 ICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 10/208 (4%)

Query: 102 IFG-CEAGILCRKRQFEKAKRFLNS--LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           IFG CE G++      E A +FL    L E GL+P    Y  +IN   + GD+ GA  + 
Sbjct: 782 IFGLCEYGLI------EIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELK 835

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           ++M   GV  + V  + ++ G  K G    A  ++   +M   + P + T+  +++GLCK
Sbjct: 836 EDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS-IMRAGMVPTIATFTTLMHGLCK 894

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             + D+   +   M+    + D  TY   I GLC    +  A  +Y EM   G+  +  T
Sbjct: 895 EFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITT 954

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKG 306
           Y  +       G +++  +L + +  +G
Sbjct: 955 YITLTGAMYATGTMQDGEKLLKDIEDRG 982


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 169/614 (27%), Positives = 286/614 (46%), Gaps = 49/614 (7%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A+ +++ L++   P  AL  F SA R P   H+    +++L  + D   V  ++ + ++
Sbjct: 135 AAEDVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDV 194

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           ++ Q           +++A          +  F  +    G E G+         A   L
Sbjct: 195 MQRQ-----------IVKA---------NVGTFAAIFGGLGVEGGL-------RSAPVAL 227

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + E G+  + Y+Y  ++  LVKSG    AL V+  M   GV  +V  Y++L+  F K+
Sbjct: 228 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKR 287

Query: 184 GDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            D      +W    ME   V PNV +Y + I  L +  RFDE   +   M+    + D  
Sbjct: 288 RDVETV--LWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVI 345

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I  LC AG +  A+ V+ +M +S    D VTY  ++D F   G+ +   E+W  M
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAM 405

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G   NVV+Y  +I  L + G+V EA+ +++ +++K    +  ++  LI+G  K    
Sbjct: 406 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK---- 461

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                           R  DA  L   MD HG K N YT    +N + ++ +   AI  +
Sbjct: 462 --------------ADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 507

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M  KG  P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++
Sbjct: 508 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 567

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K D A+K+    ++    PDV + N LI  L  AG+ ++A Q++  +K+ N  P   TY
Sbjct: 568 SKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTY 627

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL + G   + + +   +      P++I+YN  L  LC    ++DA + L     
Sbjct: 628 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 687

Query: 602 RGILPTTITWHILV 615
           +G +P   +++ ++
Sbjct: 688 KGCIPDLSSYNTVI 701



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/628 (26%), Positives = 291/628 (46%), Gaps = 70/628 (11%)

Query: 56   HVSRILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG- 108
             V R+ E +E+     QK   PE  +  S+I  + K      AL++F+ M+ I G +   
Sbjct: 426  QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD-IHGPKPNG 484

Query: 109  --------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                       +  +  KA +    +  KG+ PDV +   V+ GL KSG L  A  VF E
Sbjct: 485  YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 544

Query: 161  MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            +   GV  + + Y ++I    K   +  A +I+  ++ E +  P+V+  N +I+ L K G
Sbjct: 545  LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI-ENNCVPDVLVVNSLIDTLYKAG 603

Query: 221  RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            R DE  +++ ++K+   E    TY + + GL + G V+    +  EM  S    + +TYN
Sbjct: 604  RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 663

Query: 281  AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW------ 333
             ++D  C+ G + +  ++   M  KGC+ ++ SYN +I GL++  + +EA SI+      
Sbjct: 664  TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 723

Query: 334  -----------------------------ELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
                                         E   +     D ++   L+ G+ K     K+
Sbjct: 724  LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKS 783

Query: 365  IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            I+    +   G                 + +  +A  LV +    G  L   + NSL+ G
Sbjct: 784  IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICG 843

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  + ++ A  LF EM   GC P   +YN L++ + K  R  E     +EM  KG++  
Sbjct: 844  LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 903

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             +TY+ +I+GL +S++++ A+ L    + +GF+P    Y  L+ GL  AG++EDA  L++
Sbjct: 904  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 963

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
             M +  C  N   YN L++G    G+ +K   ++  ++++ + PDI SY I +  LC   
Sbjct: 964  EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023

Query: 588  RMSDAFEFLNDALCRGILPTTITWHILV 615
            +++D   +    L  G+ P  IT+++L+
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLI 1051



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 265/563 (47%), Gaps = 66/563 (11%)

Query: 100  NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
            N I  C    LC+      A   L S+  KG  PD+ SY TVI GLVK      A ++F 
Sbjct: 663  NTILDC----LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 718

Query: 160  EM-----------------------------------FERGVETNVVCYNILIDGFFKKG 184
            +M                                    + G +T+    + L++G  KK 
Sbjct: 719  QMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKA 778

Query: 185  DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               ++ E  E ++  + +  +      +I  LCK  +  E  E+  + K       + +Y
Sbjct: 779  GTEKSIEFAE-IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSY 837

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
             S I GL     ++ AE ++ EM E G   D  TYN ++D   ++ +I+E  ++ E M R
Sbjct: 838  NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 897

Query: 305  KGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            KG  +  V+YN +I GL+++ ++++AI ++  L  +  +    T+G L++GL K      
Sbjct: 898  KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK------ 951

Query: 364  AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         GR+ DA +L N M ++GCK N    N L+NG   A   E    LF++
Sbjct: 952  ------------AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999

Query: 424  MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            M  +G +P + SY  +I+ LCK  +  +  ++ +++LE G +PD+ITY+LLI+GL +SK+
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059

Query: 484  IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            ++ A+ L  +  +KG  P++  YN LI  L  AGK  +A ++Y  +  +   PN+ TYN 
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1119

Query: 544  LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE----FLNDA 599
            L+ G   +G  D A   +  ++     P+  + +I           SD++E    F+N  
Sbjct: 1120 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSYEIIVTFIN-- 1177

Query: 600  LCRGILPTTITWHILVRAVMNNG 622
               G+L  +  W   + +  +NG
Sbjct: 1178 -AEGMLAYSRAWKFCISSREDNG 1199



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 156/626 (24%), Positives = 275/626 (43%), Gaps = 79/626 (12%)

Query: 61   LELIEIQKCYCPEDVALS---VIQAYGKNSMPDKALDVFQRMNE-------------IFG 104
            LEL +    + P+    +    I  YGK+    KA+  ++ M               +FG
Sbjct: 469  LELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 528

Query: 105  CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                 L +  +   AKR  + L   G+ PD  +Y  +I    K+     A+ +F +M E 
Sbjct: 529  -----LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583

Query: 165  GVETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRF 222
                +V+  N LID  +K G   R  E W+    + E ++ P   TYN ++ GL + G+ 
Sbjct: 584  NCVPDVLVVNSLIDTLYKAG---RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 640

Query: 223  DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
             E + + + M  +    +  TY + +  LCK G V  A  +   M   G   D  +YN +
Sbjct: 641  KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 700

Query: 283  IDGFCRAGKIKECFELWEVMGR----------------------KGCLNVV--------- 311
            I G  +  +  E F ++  M +                      K  L+++         
Sbjct: 701  IYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGS 760

Query: 312  -----SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
                 S + L+ G+L+    +++I   E++       D      LI  LCK     +A +
Sbjct: 761  KTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHE 820

Query: 367  ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            ++ + +  G                 E  +  A  L   M + GC  + +T N L++   
Sbjct: 821  LVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 880

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            ++ ++E  + + +EM RKG   T V+YNT+I+GL K  R  +A      ++ +G+ P   
Sbjct: 881  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 940

Query: 470  TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            TY  L++GL ++ +I+ A  L  + L+ G   + T+YNIL++G   AG  E    L+ +M
Sbjct: 941  TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 1000

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
              +   P++ +Y  ++D L K G  +  L  +  +LE  L PD+I+YN+ + GL    R+
Sbjct: 1001 VDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL 1060

Query: 590  SDAFEFLNDALCRGILPTTITWHILV 615
             +A    N+   +GI+P   T++ L+
Sbjct: 1061 EEAVSLFNEMQKKGIVPNLYTYNSLI 1086



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 265/566 (46%), Gaps = 32/566 (5%)

Query: 71   CPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAK 120
            C  DV +  S+I    K    D+A  +F ++ E+        +      L R+ + ++  
Sbjct: 585  CVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 644

Query: 121  RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              L  ++     P++ +Y T+++ L K+G +  AL +   M  +G   ++  YN +I G 
Sbjct: 645  HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 704

Query: 181  FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
             K+  Y  A  I+ +  M+  + P+  T   ++    K G   E L +          K 
Sbjct: 705  VKEERYNEAFSIFCQ--MKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKT 762

Query: 241  SFTYC-SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
              + C S + G+ K    E +      +  SGI +D      +I   C+  K  E  EL 
Sbjct: 763  DRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 822

Query: 300  EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +     G  L   SYN LI GL++   +D A  ++  ++E  C  D  T+ +L++ + K+
Sbjct: 823  KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 882

Query: 359  GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
              + + +++  E                  M + G +    T N++++G +++ +LE AI
Sbjct: 883  MRIEEMLKVQEE------------------MHRKGYESTYVTYNTIISGLVKSRRLEQAI 924

Query: 419  FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             L+  +  +G SPT  +Y  L++GL K  R  +A +   EMLE G K +   Y++L+NG 
Sbjct: 925  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984

Query: 479  CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
              +   +    L    + +G  PD+  Y I+I  LC AG++ D L  +  + +    P+L
Sbjct: 985  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1044

Query: 539  VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            +TYN L+DGL K+   ++A+ ++N + ++ + P++ +YN  +  L    + ++A +   +
Sbjct: 1045 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1104

Query: 599  ALCRGILPTTITWHILVRAVMNNGAS 624
             L +G  P   T++ L+R    +G++
Sbjct: 1105 LLTKGWKPNVFTYNALIRGYSVSGST 1130



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 245/499 (49%), Gaps = 24/499 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L + R+F++A R L  +  +G KPDV ++  +I  L  +G +  A  VF +M +   + 
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 377

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLE 227
           + V Y  L+D F   G+     EIW    M+   Y  NVV Y  +I+ LC+ GR  E LE
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWN--AMKADGYNDNVVAYTAVIDALCQVGRVFEALE 435

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M+D MK+     + ++Y S I G  KA     A  +++ M   G   +  T+   I+ + 
Sbjct: 436 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYG 495

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           ++G+  +  + +E+M  KG + +VV+ N ++ GL ++G++  A  ++  L+    + D+ 
Sbjct: 496 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 555

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ ++I    K    ++A++I  +                  M ++ C  +    NSL++
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYD------------------MIENNCVPDVLVVNSLID 597

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +A + + A  +F ++      PT  +YNTL+ GL +  +  E    ++EM    + P
Sbjct: 598 TLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 657

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           ++ITY+ +++ LC++  ++ AL +      KG  PD++ YN +I+GL    +  +A  ++
Sbjct: 658 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN-HILEERLRPDIISYNITLKGLCS 585
             MKK   +P+  T  T++    K G   +AL I   + L+   + D  S +  ++G+  
Sbjct: 718 CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 586 CSRMSDAFEFLNDALCRGI 604
            +    + EF       GI
Sbjct: 777 KAGTEKSIEFAEIIASSGI 795



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 216/504 (42%), Gaps = 92/504 (18%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N M++ +   GR  +  E++D M++   + +  T+ +   GL   G +  A      M E
Sbjct: 173 NYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 232

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--------------------- 308
           +GI ++A TYN ++    ++G  +E  E+++VM   G +                     
Sbjct: 233 AGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVET 292

Query: 309 ---------------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
                          NV SY I IR L +  + DEA  I   +  + C  D  TH VLI 
Sbjct: 293 VLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQ 352

Query: 354 GLCKNGYLNKA-------------------IQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            LC  G ++ A                   I +L++  + GE +      + N M   G 
Sbjct: 353 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ--SVMEIWNAMKADGY 410

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N     ++++   Q  ++  A+ +F EM +KG  P   SYN+LI+G  K +RFG+A  
Sbjct: 411 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 470

Query: 455 FVKEMLEKGWKPDMITYSLLIN-----------------------------------GLC 479
             K M   G KP+  T+ L IN                                   GL 
Sbjct: 471 LFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLA 530

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S ++ MA ++  +    G +PD   Y ++I     A K ++A++++ +M + NCVP+++
Sbjct: 531 KSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL 590

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
             N+L+D L+K G  D+A +I+  + E  L P   +YN  L GL    ++ +    L + 
Sbjct: 591 VVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 650

Query: 600 LCRGILPTTITWHILVRAVMNNGA 623
                 P  IT++ ++  +  NGA
Sbjct: 651 YHSNYPPNLITYNTILDCLCKNGA 674



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 168/379 (44%), Gaps = 20/379 (5%)

Query: 248 IHGLCKA-GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           IH L  A G  E  ER         +     + N M+D     G++ +  E+++VM R+ 
Sbjct: 140 IHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQI 199

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV ++  +  GL   G +  A     +++E     ++ T+  L+  L K+G+  +A+
Sbjct: 200 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 259

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++                  V  +D  G   +  T + LM  F +   +E  ++L +EM 
Sbjct: 260 EVYK----------------VMMVD--GVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 301

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P V SY   I  L +  RF EAY  + EM  +G KPD+IT+++LI  LC + +I 
Sbjct: 302 AHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRIS 361

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +  +  +    PD   Y  L+      G+ +  +++++ MK      N+V Y  ++
Sbjct: 362 DAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVI 421

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D L + G   +ALE+++ + ++ + P+  SYN  + G     R  DA E        G  
Sbjct: 422 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPK 481

Query: 606 PTTITWHILVRAVMNNGAS 624
           P   T  + +     +G S
Sbjct: 482 PNGYTHVLFINYYGKSGES 500


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 289/584 (49%), Gaps = 42/584 (7%)

Query: 36  HSPHLFH--HIL----RRLIDPKL-VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSM 88
           HSP   H  +IL    RR+  P L +  V R+L     +    P+D + S+I  + K+  
Sbjct: 95  HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL-----KNGLGPDDFSYSLIYGFVKDGE 149

Query: 89  PDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            DKA  +F  M E      I  C + I  LC+ ++ +KA+  +  + + G+ PD+++Y  
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+GL KS  +  A  V ++M E G   N + YN LI G+   G +  +  +++++    
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS-SC 268

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN--VE 258
            V P V   N  I+ L K GR +E   ++D M     + D  +Y + +HG   A +  + 
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
               ++  M+  GI  +   +N +I+ + R G + +   ++E M  KG + + V++  +I
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-----VE 372
             L   G++D+A+  +  + +         +G LI G C +G L KA ++++E     + 
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448

Query: 373 EGG-------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
             G             EGR+A+   +++ M + G + N  T NSLM G+     +E A  
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 508

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L   M+  G  P    Y TL++G CK  R  +A +  ++ML KG KP  + YS++++GL 
Sbjct: 509 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q+++   A K+  + ++ G T  +  Y +++ GLC     ++A  L   +   N   +++
Sbjct: 569 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 628

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           T+N ++  +FK G   +A E+++ I    L P+I +Y++ +  L
Sbjct: 629 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 672



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 240/497 (48%), Gaps = 24/497 (4%)

Query: 133 PDVYSYGTVIN--GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P +++Y  +I+    V   DL   LA+   + + G+  +   Y+ LI GF K G+  +A 
Sbjct: 98  PTIHTYNILIDCYRRVHRPDL--GLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 154

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++  + ME  V P ++  N +I  LCK    D+   +  +M  +    D FTY   I G
Sbjct: 155 CLFLEM-MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           LCK+  ++ AERV  +MVE+G   +++TYN++I G+  +G   E   +++ M   G +  
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 311 VSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V   N  I  L ++G+ +EA  I++ +  K    D  ++  +++G               
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT------------ 321

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 +  LAD  ++ N M   G   N +  N L+N + +   ++ A+ +F++M  KG 
Sbjct: 322 ----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 377

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V++ T+I+ LC++ R  +A      M++ G  P    Y  LI G C   ++  A +
Sbjct: 378 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 437

Query: 490 LCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           L  + + K   P  V  ++ +I+ LC  G+V +   +   M +    PN+VT+N+LM+G 
Sbjct: 438 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G+ ++A  + + +    + P+   Y   + G C   R+ DA     D L +G+ PT+
Sbjct: 498 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 557

Query: 609 ITWHILVRAVMNNGAST 625
           + + I++  +     +T
Sbjct: 558 VLYSIILHGLFQARRTT 574



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 248/518 (47%), Gaps = 23/518 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L + GL PD +SY ++I G VK G++  A  +F EM E+GV   ++  N +I    K  +
Sbjct: 126 LLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 184

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A+ I +++V ++ + P++ TY+++I+GLCK    D+   + ++M +     +S TY 
Sbjct: 185 MDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYN 243

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S IHG   +G    + RV+++M   G+       N+ I    + G+  E   +++ M  K
Sbjct: 244 SLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLK 303

Query: 306 GC-LNVVSYNILIRG--LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           G   +++SY+ ++ G     +  + +  +I+ L+  K    +     +LIN   + G ++
Sbjct: 304 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 363

Query: 363 KAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           KA+ I  +++  G                  GRL DA    N M   G   +      L+
Sbjct: 364 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 423

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSY-NTLINGLCKVERFGEAYSFVKEMLEKGW 464
            G     +L  A  L  EM  K   P  V Y +++IN LCK  R  E    +  M++ G 
Sbjct: 424 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 483

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           +P+++T++ L+ G C    ++ A  L       G  P+  +Y  L+ G C  G+++DAL 
Sbjct: 484 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 543

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           ++ +M  +   P  V Y+ ++ GLF+      A ++++ ++E      I +Y + L GLC
Sbjct: 544 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 603

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +   +A   L       +    IT++I++ A+   G
Sbjct: 604 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 641



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 258/548 (47%), Gaps = 35/548 (6%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           +P LF +  I+  L   K +    R+LE + ++    P  +   S+I  Y  + M ++++
Sbjct: 201 APDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 94  DVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            VF++M+       +  C + I  L +  +  +AK   +S+  KG KPD+ SY T+++G 
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 146 VKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
             + D  L     +F+ M  +G+  N   +NILI+ + + G   +A  I+E +     + 
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMI 378

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ VT+  +I+ LC+ GR D+ L  ++ M           Y   I G C  G +  A+ +
Sbjct: 379 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 438

Query: 264 YREMVESGIFVDAVTY-NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
             EM+   I    V Y +++I+  C+ G++ E  ++ ++M + G   NVV++N L+ G  
Sbjct: 439 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 498

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
             G ++EA ++ + +       +   +G L++G CKNG                  R+ D
Sbjct: 499 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG------------------RIDD 540

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A ++   M   G K  +   + +++G  QA +   A  +F EM   G + ++ +Y  ++ 
Sbjct: 541 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 600

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC+     EA   ++++     K D+IT++++I+ + +  +   A +L       G  P
Sbjct: 601 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 660

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++  Y+++I  L      E+A  L+ +++K     +    N ++  L    +  KA    
Sbjct: 661 NIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 720

Query: 562 NHILEERL 569
           + I E  L
Sbjct: 721 SIIGENNL 728



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 186/445 (41%), Gaps = 57/445 (12%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDK 91
           G A + H+F+ ++       ++     I E ++  K   P+ V   +VI +  +    D 
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ-NKGMIPDTVTFATVISSLCRIGRLDD 399

Query: 92  ALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD-VYSYGTVI 142
           AL  F  M +I        +GC     C   +  KAK  ++ +  K + P  V  + ++I
Sbjct: 400 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 459

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           N L K G +     + D M + G   NVV +N L++G+   G+   A  + + +     +
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGI 518

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN   Y  +++G CK GR D+ L ++  M     +  S  Y   +HGL +A     A++
Sbjct: 519 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 578

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCR---------------------------------- 288
           ++ EM+ESG  V   TY  ++ G CR                                  
Sbjct: 579 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 638

Query: 289 -AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G+ +E  EL++ +   G + N+ +Y+++I  L++    +EA +++  + +    +DS 
Sbjct: 639 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 698

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
               ++  L     + KA   L+ +   GE  L   AS ++ +       + ++   ++ 
Sbjct: 699 LLNHIVRMLLNKAEVAKASNYLSII---GENNLTLEASTISLL------ASLFSREGMIK 749

Query: 407 GFIQASKLENAIFLFKEMSRKGCSP 431
           G    +       L  E+S+   +P
Sbjct: 750 GLFGTAPAPAPALLELELSQTVSAP 774


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 233/476 (48%), Gaps = 20/476 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +   EK  + + + W  G  P+   Y  +I+G  + GD+   + +  EM  +G+   
Sbjct: 269 LCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPT 328

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L+    +KGD  +   +   +  E  + PNV  YN +I+ LCKC    + L + 
Sbjct: 329 VVTYGTLMSWLGRKGDLEKIASLLSEM-RERRLPPNVQIYNSVIDALCKCRSASQALVVL 387

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M     + D+ T+ + I GLC+ G V+ AER+ RE     +  +  +Y ++I GFC  
Sbjct: 388 KQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVR 447

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++     L  E+M R    +VV++  LI GL+  G+V EA+ + E +  +    D+  +
Sbjct: 448 GEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIY 507

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLI+GLCK   L  A  ++ E+ E                       + Y   +L++GF
Sbjct: 508 NVLISGLCKKKMLPAARNLIEEMLE------------------QNVHPDKYVYTTLIDGF 549

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           I+   L+ A  +F+ M +KG  P VV YN +I G C+     EA   +  M + G  PD 
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDE 609

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+ LI G  +   I  AL L C  +++   P+V  Y+ LI+G C  G  + A  L+ +
Sbjct: 610 FTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGS 669

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           M+ +   PN++TY  L+  LFK     +A   + ++L  +  P+  + +  + GLC
Sbjct: 670 MESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/562 (27%), Positives = 256/562 (45%), Gaps = 39/562 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           +++  Y    M  KA ++ QR  E  G   G          L  +R+++ A++  + +  
Sbjct: 193 ALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLA 252

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +    D YS   ++ GL   G +   L + +  +  G   N V YN+LIDG+ ++GD  R
Sbjct: 253 EESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGR 312

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
              +   +  +  + P VVTY  +++ L + G  ++   +   M++     +   Y S I
Sbjct: 313 GILLLGEMEAK-GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVI 371

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL------WEVM 302
             LCK  +   A  V ++M   G   DA+T++ +I G C+ G+++E   L      WE+ 
Sbjct: 372 DALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN 431

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
                 N+ SY  LI G    G+V  A ++   + E+    D  T G LI+GL   G ++
Sbjct: 432 P-----NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVS 486

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A+ +  ++       L DA              N Y  N L++G  +   L  A  L +
Sbjct: 487 EALLVREKM--AARQLLPDA--------------NIY--NVLISGLCKKKMLPAARNLIE 528

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM  +   P    Y TLI+G  + E   EA    + M +KG  PD++ Y+ +I G CQ  
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFG 588

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            ++ A++      + G  PD   Y  LI G    G +  AL L  +M KR C PN+V Y+
Sbjct: 589 MMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYS 648

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L++G  K GD D A  ++  +  + L P++I+Y I +  L    ++  A  +    L  
Sbjct: 649 SLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLN 708

Query: 603 GILPTTITWHILVRAVMNNGAS 624
              P   T H LV  + N+ AS
Sbjct: 709 QCSPNDYTLHSLVTGLCNSMAS 730



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 229/489 (46%), Gaps = 22/489 (4%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNV---VCYNILIDGFFKKGDYMRAKEIWE 194
           +  ++  L ++G      A   +M   G    V    C   L+  +   G   +A E+ +
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R        P     N ++  L +  R+D+  +++D M   E   D ++ C  + GLC  
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G VE   ++      +G   +AV YN +IDG+CR G +     L   M  KG L  VV+Y
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             L+  L   G +++  S+   +RE+    +   +  +I+ LCK    ++A+ +L ++  
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
           GG                  C  +A T ++L++G  Q  +++ A  L +E +R   +P +
Sbjct: 393 GG------------------CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNL 434

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            SY +LI+G C       A + + EM+E+G  PD++T+  LI+GL  + ++  AL +  +
Sbjct: 435 SSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREK 494

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              +   PD  +YN+LI GLC    +  A  L   M ++N  P+   Y TL+DG  +   
Sbjct: 495 MAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNES 554

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            D+A +I+  + ++ + PD++ YN  +KG C    M++A E ++     G +P   T+  
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614

Query: 614 LVRAVMNNG 622
           L+      G
Sbjct: 615 LIGGYAKQG 623



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 246/538 (45%), Gaps = 36/538 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+    +    L  +  KGL P V +YGT+++ L + GDL    ++  EM ER +  NV
Sbjct: 305 CRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNV 364

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +ID   K     +A  + +++       P+ +T++ +I+GLC+ GR  E   +  
Sbjct: 365 QIYNSVIDALCKCRSASQALVVLKQM-FAGGCDPDAITFSTLISGLCQEGRVQEAERLLR 423

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
              + E   +  +Y S IHG C  G V  A  +  EM+E G   D VT+ A+I G   AG
Sbjct: 424 ETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAG 483

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E   + E M  +  L   + YN+LI GL +   +  A ++ E + E+N + D   + 
Sbjct: 484 QVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYT 543

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKH 392
            LI+G  +N  L++A +I   +E+ G                  G + +A   ++ M K 
Sbjct: 544 TLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV 603

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   + +T  +L+ G+ +   +  A+ L  +M ++ C P VV+Y++LING CK+     A
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA 663

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M  +G  P++ITY++LI  L +  K+  A       L    +P+    + L+ G
Sbjct: 664 ECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG 723

Query: 513 LCSA----------------GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           LC++                GK    L ++  +    C P    YN ++  L       +
Sbjct: 724 LCNSMASIISSHCSSTVNLHGK-GALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGE 782

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           AL++ N +  +  +PD  ++   L G CS  +  +    L +   R  L     + IL
Sbjct: 783 ALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKIL 840



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 219/506 (43%), Gaps = 44/506 (8%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     L RK   EK    L+ + E+ L P+V  Y +VI+ L K      AL V  +MF
Sbjct: 332 YGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMF 391

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY---PNVVTYNVMINGLCKC 219
             G + + + ++ LI G  ++G    A    ERL+ ET+ +   PN+ +Y  +I+G C  
Sbjct: 392 AGGCDPDAITFSTLISGLCQEGRVQEA----ERLLRETTRWELNPNLSSYTSLIHGFCVR 447

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G       +   M +     D  T+ + IHGL  AG V  A  V  +M    +  DA  Y
Sbjct: 448 GEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIY 507

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N +I G C+   +     L E M  +    +   Y  LI G + N  +DEA  I+E + +
Sbjct: 508 NVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQ 567

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLAD 381
           K  + D   +  +I G C+ G +N+A++ ++ + + G                 +G ++ 
Sbjct: 568 KGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISG 627

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A SL+  M K  C+ N    +SL+NG+ +    + A  LF  M  +G  P V++Y  LI 
Sbjct: 628 ALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIG 687

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK--IDMALKLCCQFLQKGF 499
            L K ++   A  + + ML     P+  T   L+ GLC S    I            KG 
Sbjct: 688 SLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGA 747

Query: 500 TPDV-------------TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
             D+             + YN +I  LC    + +AL L + M  +   P+  T+ +L+ 
Sbjct: 748 LLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLY 807

Query: 547 GLFKTGDCDKALEIWNHILEERLRPD 572
           G    G   +    W  IL    + D
Sbjct: 808 GFCSVGKSRE----WRTILPNEFQRD 829



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 208/465 (44%), Gaps = 46/465 (9%)

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
           L E+++   P +V +  SVI A  K     +AL V ++M    GC+            LC
Sbjct: 352 LSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA-GGCDPDAITFSTLISGLC 410

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++ + ++A+R L       L P++ SY ++I+G    G+++ A  +  EM ERG   +VV
Sbjct: 411 QEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            +  LI G    G    A  + E++     + P+   YNV+I+GLCK         + + 
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAAR-QLLPDANIYNVLISGLCKKKMLPAARNLIEE 529

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M +     D + Y + I G  +  +++ A +++  M + GI  D V YNAMI G+C+ G 
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E  E    M + G + +  +Y  LI G  + G +  A+S+   + ++ C  +   +  
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSS 649

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LING CK G  + A  +   +E  G                 + ++  AA     M  + 
Sbjct: 650 LINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709

Query: 394 CKLNAYTCNSLMNGF------IQASKLENAIFL---------FKEMSRKGCSPTVVSYNT 438
           C  N YT +SL+ G       I +S   + + L         F+ +    C P   +YN 
Sbjct: 710 CSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNA 769

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +I  LC     GEA     +M  KG+KPD  T+  L+ G C   K
Sbjct: 770 IIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 25/314 (7%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           ++++ ++  L   K++     ++E +  Q  +  + V  ++I  + +N   D+A  +F+ 
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564

Query: 99  MNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
           M +      + G  A I   C+     +A   ++++ + G  PD ++Y T+I G  K G+
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           + GAL++  +M +R  + NVV Y+ LI+G+ K GD   A+ ++  +  +  ++PNV+TY 
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQ-GLFPNVITYT 683

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG------------NVE 258
           ++I  L K  +       ++ M  N+   + +T  S + GLC +             N+ 
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLH 743

Query: 259 GAER---VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
           G      ++R +V          YNA+I   C    + E  +L   M  KG   +  ++ 
Sbjct: 744 GKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFL 803

Query: 315 ILIRGLLENGKVDE 328
            L+ G    GK  E
Sbjct: 804 SLLYGFCSVGKSRE 817


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 242/476 (50%), Gaps = 20/476 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P+VY+   +IN       +  A +V  ++ + G + +   +  LI G   +G    A
Sbjct: 95  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++++++ E    PNVVTY  +INGLCK G     + +   M++   + D   Y S I 
Sbjct: 155 LHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LCK   V  A  ++ +MV  GI  D  TY +++   C   + K    L   M     L 
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV ++ ++  L + GKV EA  I +++ ++    D  T+  L++G C    +++A+++ 
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +                   M + G   +  +  +L+NG+ +  K++ A++LF+EM RK 
Sbjct: 334 D------------------MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   +YNTL+ GLC V R  +A +   EM+ +G  PD++TYS+L++ LC+++ ++ A+
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAM 435

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L          PD+ +YNI+I G+C AG++E A  L+SN+  +   P++ TYN ++ GL
Sbjct: 436 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
            K G  ++A +++  +      PD  +YN   +G    +    A + L + L RG 
Sbjct: 496 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 229/444 (51%), Gaps = 20/444 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G +PD  ++ T+I GL   G +  AL +FD+M + G + NVV Y  LI+G  K G+   A
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 189

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  R + + +  P+VV Y  +I+ LCK  +  E   ++ +M       D FTY S +H
Sbjct: 190 IRL-LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 248

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LC     +    +  +MV S I  D V ++ ++D  C+ GK+ E  E+ ++M ++G   
Sbjct: 249 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV+Y  L+ G     ++DEA+ +++++  K    D  ++  LING CK   ++KA+ + 
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E                  M +     +  T N+LM G     +L++AI LF EM  +G
Sbjct: 369 EE------------------MCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P +V+Y+ L++ LCK     EA + +K +      PD+  Y+++I+G+C++ +++ A 
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L      KG  P V  YNI+IHGLC  G + +A +L+  M   +C P+  TYNT+  G 
Sbjct: 471 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530

Query: 549 FKTGDCDKALEIWNHILEERLRPD 572
            +  +  +A+++   +L      D
Sbjct: 531 LQNNETLRAIQLLEEMLARGFSAD 554



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 240/490 (48%), Gaps = 20/490 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  ++  + K       L++  +M   GV  NV   NILI+ F        A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+  T+  +I GLC  G+  E L ++D+M     + +  TY + I+GLC
Sbjct: 123 LAK-ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 181

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K GN   A R+ R M +     D V Y ++ID  C+  ++ E F L+  M  +G   ++ 
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  L+  L    +     ++   +       D      +++ LCK              
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK-------------- 287

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A  +V+ M + G + +  T  +LM+G    S+++ A+ +F  M RKG +P
Sbjct: 288 ----EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V+SY TLING CK+ +  +A    +EM  K W PD  TY+ L+ GLC   ++  A+ L 
Sbjct: 344 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALF 403

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + + +G  PD+  Y+IL+  LC    +E+A+ L   ++  N  P++  YN ++DG+ + 
Sbjct: 404 HEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 463

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ + A ++++++  + L P + +YNI + GLC    +++A +   +       P   T+
Sbjct: 464 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 523

Query: 612 HILVRAVMNN 621
           + + R  + N
Sbjct: 524 NTIARGFLQN 533



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 214/439 (48%), Gaps = 22/439 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++V +  ++  + K   +   L +  +M       + +T    I+  C    V  A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
             ++++ G   D  T+  +I G C  GKI E   L++ M  +G   NVV+Y  LI GL +
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD- 381
            G    AI +   + + NC  D   +  +I+ LCK+  + +A  + +++   G+G   D 
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV--GQGISPDI 240

Query: 382 ------------------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                               +L+N+M       +    +++++   +  K+  A  +   
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M ++G  P VV+Y TL++G C      EA      M+ KG+ PD+I+Y+ LING C+  K
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ID A+ L  +  +K + PD   YN L++GLC  G+++DA+ L+  M  R  +P+LVTY+ 
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+D L K    ++A+ +   I    L PDI  YNI + G+C    +  A +  ++   +G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480

Query: 604 ILPTTITWHILVRAVMNNG 622
           + P+  T++I++  +   G
Sbjct: 481 LHPSVWTYNIMIHGLCKRG 499



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 210/443 (47%), Gaps = 43/443 (9%)

Query: 12  LKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS------------- 58
           L  + +P T   L      E     + HLF  ++     P +V + +             
Sbjct: 129 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 188

Query: 59  --RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI- 109
             R+L  +E   C     +  S+I +  K+    +A ++F +M       +IF   + + 
Sbjct: 189 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 248

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC   +++     LN +    + PDV  + TV++ L K G +  A  + D M +RGVE 
Sbjct: 249 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV Y  L+DG   + +   A ++++ +V +    P+V++Y  +ING CK  + D+ + +
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK-GFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++ M + E   D+ TY + ++GLC  G ++ A  ++ EMV  G   D VTY+ ++D  C+
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
              ++E   L + +       ++  YNI+I G+   G+++ A  ++  L  K  +    T
Sbjct: 428 NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 487

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + ++I+GLCK G LN+A ++  E                  MD + C  +  T N++  G
Sbjct: 488 YNIMIHGLCKRGLLNEANKLFME------------------MDGNDCSPDGCTYNTIARG 529

Query: 408 FIQASKLENAIFLFKEMSRKGCS 430
           F+Q ++   AI L +EM  +G S
Sbjct: 530 FLQNNETLRAIQLLEEMLARGFS 552



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L DA S  NR+       +      L+    +       + L  +M   G  P V + N 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C + R G A+S + ++L+ G +PD  T++ LI GLC   KI  AL L  + + +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F P+V  Y  LI+GLC  G    A++L  +M++ NC P++V Y +++D L K     +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ ++ + + PDI +Y   +  LC+          LN  +   ILP  + +  +V A+
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 619 MNNGAST 625
              G  T
Sbjct: 286 CKEGKVT 292



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%)

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N+  +  +  + L++A+  F  +      P++V +  L+  + K++ +    S   +M  
Sbjct: 34  NNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 93

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P++ T ++LIN  C   ++  A  +  + L+ G  PD T +  LI GLC  GK+ +
Sbjct: 94  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 153

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           AL L+  M      PN+VTY TL++GL K G+   A+ +   + +   +PD++ Y   + 
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            LC   ++++AF   +  + +GI P   T+  LV A+ N
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 252



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 131/278 (47%), Gaps = 26/278 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS---------------RILELIEIQ 67
            + D+  +E     +  +   +++R ++P +V + +               ++ +++ ++
Sbjct: 280 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM-VR 338

Query: 68  KCYCPEDVALS-VIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEK 118
           K + P+ ++ + +I  Y K    DKA+ +F+ M         + +      LC   + + 
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    + +  +G  PD+ +Y  +++ L K+  L  A+A+   +    +  ++  YNI+ID
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  + G+   A++++  L     ++P+V TYN+MI+GLCK G  +E  +++  M  N+  
Sbjct: 459 GMCRAGELEAARDLFSNLS-SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCS 517

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            D  TY +   G  +      A ++  EM+  G   D+
Sbjct: 518 PDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 243/505 (48%), Gaps = 23/505 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R  + E+  RFL  +  KG  PDV +   +I    K G    A  +   + E G   +
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN+LI+ + K G+   A     R++  TSV PN  TY+ ++  LC  G+  + +++ 
Sbjct: 139 ANSYNVLINAYCKSGEIEEAL----RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVL 194

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           DR  +++   D  T    I   CK   V  A +++ EM   G   D VTYN +I GFC+ 
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E     + +   GC  +V+S+N+++R L   G+  +A+ +   +  K C     T 
Sbjct: 255 GRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LIN LC+ G L KA+ +L                    M KHG   N+ + N L+ GF
Sbjct: 315 NILINFLCQKGLLGKALNVL------------------EMMPKHGHTPNSRSFNPLIQGF 356

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                ++ AI   + M  +GC P +V+YN L+  LCK  +  +A   + ++  KG  P +
Sbjct: 357 CNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 416

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL +  K ++A++L  +   KG  PD+     ++ GL   GKV +A++ +  
Sbjct: 417 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHY 476

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           +K     PN   YN++M GL K      A++    ++    +P   SY   +KG+     
Sbjct: 477 LKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGL 536

Query: 589 MSDAFEFLNDALCRGILPTTITWHI 613
             +A +  N+   RG++  ++   +
Sbjct: 537 AEEASKLSNELYSRGLVKKSLIVKV 561



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 222/455 (48%), Gaps = 57/455 (12%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV    +I   CK GR      +   ++++    D+ +Y   I+  CK+G +E A RV
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV 161

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              +  + +  +A TY+A++   C  GK+K+  ++ +   +  C  +VV+  +LI    +
Sbjct: 162 ---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
              V +A+ ++  +R K C  D  T+ VLI G CK                  EGRL +A
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK------------------EGRLDEA 260

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
              + ++  +GC+ +  + N ++       +  +A+ L   M RKGC P+VV++N LIN 
Sbjct: 261 IIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINF 320

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+    G+A + ++ M + G  P+  +++ LI G C  K ID A++     + +G  PD
Sbjct: 321 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPD 380

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  YNIL+  LC  GKV+DA+ + S +  + C P+L++YNT++DGL K G  + A+E+  
Sbjct: 381 IVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE 440

Query: 563 HILEERLRPDIIS-----------------------------------YNITLKGLCSCS 587
            +  + L+PD+I+                                   YN  + GLC   
Sbjct: 441 EMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQ 500

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + S A +FL D +  G  PT  ++  L++ +   G
Sbjct: 501 QTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEG 535



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 189/383 (49%), Gaps = 25/383 (6%)

Query: 246 SFIHGLCKA---GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           S IH LC+    G +E   R    M   G   D V   A+I  FC+ G+ K    +  ++
Sbjct: 71  SEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGIL 130

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G  ++  SYN+LI    ++G+++EA+ +   L   +   ++ T+  ++  LC  G L
Sbjct: 131 EESGAVIDANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKL 187

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            +A+Q+L+                  R  +  C  +  TC  L++   + S +  A+ LF
Sbjct: 188 KQAMQVLD------------------RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 229

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM  KGC P VV+YN LI G CK  R  EA  F+K++   G + D+I++++++  LC  
Sbjct: 230 NEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSG 289

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +   A+KL    L+KG  P V  +NILI+ LC  G +  AL +   M K    PN  ++
Sbjct: 290 GRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 349

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N L+ G       D+A+E    ++     PDI++YNI L  LC   ++ DA   L+    
Sbjct: 350 NPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 409

Query: 602 RGILPTTITWHILVRAVMNNGAS 624
           +G  P+ I+++ ++  ++  G +
Sbjct: 410 KGCSPSLISYNTVIDGLLKVGKA 432



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 214/450 (47%), Gaps = 25/450 (5%)

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN-----EIFGCEAGIL 110
           + +RI+ ++E        +    +I AY K+   ++AL V    +       +      L
Sbjct: 122 NATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSL 181

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C + + ++A + L+   +    PDV +   +I+   K   +  A+ +F+EM  +G + +V
Sbjct: 182 CDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDV 241

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN+LI GF K+G    A  I+ + +       +V+++N+++  LC  GR+ + +++  
Sbjct: 242 VTYNVLIKGFCKEGRLDEAI-IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLA 300

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +        T+   I+ LC+ G +  A  V   M + G   ++ ++N +I GFC   
Sbjct: 301 TMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRK 360

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            I    E  E+M  +GC  ++V+YNIL+  L ++GKVD+A+ I   L  K C+    ++ 
Sbjct: 361 GIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYN 420

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            +I+GL K G    A+++L E                  M   G K +  TC S++ G  
Sbjct: 421 TVIDGLLKVGKAELAVELLEE------------------MCYKGLKPDLITCTSVVGGLS 462

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K+  AI  F  +   G  P    YN+++ GLCK ++   A  F+ +M+  G KP   
Sbjct: 463 REGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEA 522

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           +Y+ LI G+      + A KL  +   +G 
Sbjct: 523 SYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 13/286 (4%)

Query: 32  PGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSM 88
           P Y     +  H  ILR L      +   ++L  +  + C+ P  V  ++ I    +  +
Sbjct: 268 PSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF-PSVVTFNILINFLCQKGL 326

Query: 89  PDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
             KAL+V + M        +  F       C ++  ++A   L  +  +G  PD+ +Y  
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++  L K G +  A+ +  ++  +G   +++ YN +IDG  K G    A E+ E +  + 
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK- 445

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
            + P+++T   ++ GL + G+  E ++ +  +K    + ++F Y S + GLCKA     A
Sbjct: 446 GLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLA 505

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
                +MV +G      +Y  +I G    G  +E  +L   +  +G
Sbjct: 506 IDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 282/597 (47%), Gaps = 33/597 (5%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           EPG AH   +F  +L+R  D   +  ++R L  +          VA+S+      N MP 
Sbjct: 42  EPGDAH--QVFDRLLKR-GDRASIFDLNRALSDV----ARASPAVAISLF-----NRMPR 89

Query: 91  KALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                       +G   G   R  + + A   +  +   GL+     +  ++ GL     
Sbjct: 90  AGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRR 149

Query: 151 LLGAL-AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVT 208
              A+  V   M E G + ++  Y IL+ G        +A ++   +       P +VV 
Sbjct: 150 TSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVA 209

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  +INGL + G+ D+   ++D M       D  TY S I  L K   ++ A +V+  MV
Sbjct: 210 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 269

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
           ++G+  D + Y +++ G+C +GK KE   +++ M R G   +VV+Y  L+  L +NGK  
Sbjct: 270 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 329

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           EA  I++ L ++    DSTT+G L++G                     EG L +   L++
Sbjct: 330 EARKIFDSLVKRGHKPDSTTYGTLLHGYAT------------------EGALVEMHDLLD 371

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M K G +L  +  N +M  + + +K++ A+ +F  M ++G +P +V+Y T+++ LC   
Sbjct: 372 LMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 431

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  +A S    +  +G  P+++ ++ LI+GLC   K D   +L  + + +G   D   +N
Sbjct: 432 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 491

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            ++  LC  G+V +A  L+  M +    PN  TYNTL+DG    G  D+A+++   ++  
Sbjct: 492 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 551

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            ++P  ++YN  + G     R+ D    L +   +G+ P  +T+ +L++ +   G +
Sbjct: 552 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 608



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 272/570 (47%), Gaps = 39/570 (6%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHIL-----RRLIDPKLVVHVSRILELIEIQK 68
           A  +P  A++LF+   R    + +P++  + +     RRL   +L +  + +  +I    
Sbjct: 73  ARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRL--GRLDLAFATVGRVITTGL 130

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKA 119
              P   +  +++          A+D+  R     GC+  +         LC  +  ++A
Sbjct: 131 RMSPILFS-PLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQA 189

Query: 120 KRFLNSLWE-KGLKP-DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
              L+ + + KG  P DV +Y TVINGL++ G L  A ++FD M +RG   +VV Y+ +I
Sbjct: 190 LDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSII 249

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
               K     +A +++ R+V +  V P+ + Y  +++G C  G+  E + ++ +M ++  
Sbjct: 250 SALSKTQAMDKATQVFTRMV-KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 308

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E D  TY + +  LCK G    A +++  +V+ G   D+ TY  ++ G+   G + E  +
Sbjct: 309 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHD 368

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L ++M +KG  L    +N+++    ++ KVDEA+ ++  +R++  N D   +G +++ LC
Sbjct: 369 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 428

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                               GR+ DA S  N +   G   N     +L++G     K + 
Sbjct: 429 T------------------AGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDK 470

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
              L  EM  +G     + +N ++  LCK  R  EA +    M+  G +P+  TY+ LI+
Sbjct: 471 VEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID 530

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C   K+D A+KL    +  G  P    YN +I+G    G++ED L L   M  +   P
Sbjct: 531 GYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNP 590

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            +VTY  L+ GLF+ G    A E++  +++
Sbjct: 591 GIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 45/300 (15%)

Query: 370 EVEEGGEGRL---ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
             ++GG  R     DA  + +R+ K G + + +  N  ++   +AS    AI LF  M R
Sbjct: 31  RTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPR 89

Query: 427 KGCS---PTVVSY-----------------------------------NTLINGLCKVER 448
            G +   P + +Y                                   + L+ GLC   R
Sbjct: 90  AGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRR 149

Query: 449 FGEAYSFV-KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTP-DVTM 505
             +A   V + M E G KPD+ +Y++L+ GLC  K    AL L       KG  P DV  
Sbjct: 150 TSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVA 209

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  +I+GL   G+++ A  L+  M  R   P++VTY++++  L KT   DKA +++  ++
Sbjct: 210 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 269

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           +  + PD I Y   + G CS  +  +A          G+ P  +T+  L+  +  NG ST
Sbjct: 270 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 329


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 233/464 (50%), Gaps = 20/464 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  +Q + A  FL  L ++G   + Y +  VI+G    G +  A+ VFD M + G   +
Sbjct: 258 LCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPD 317

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y+IL+DG  K+GD +    +   +     + PN+V+Y+ +++GLC+ GR +   E++
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMA-RNGITPNLVSYSSLLHGLCRAGRVELAFELF 376

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            R+K    + D   Y   +HG C+  ++E    ++ +MV      DA  Y+++I  +CR 
Sbjct: 377 KRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRH 436

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++KE  E++E+M   G C NVV+  IL+ G    G + EA    + +R+        T+
Sbjct: 437 RQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTY 496

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            V+I+GLCK   +NK                 D   +   M K G   +    + +++GF
Sbjct: 497 RVIIHGLCK---VNKP---------------NDMWGIFADMIKRGYVPDTVLYSIIIDGF 538

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A  L+ A  L+ +M  +G  P + +Y +LINGLC  ++  E  +  K M+ +G  PD 
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDR 598

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I Y+ LI   C+   +  AL++  +   +G + D  +Y  LI G      ++ A      
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEE 658

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           M  +   P +VTY  L+ G FK GD  KA+ ++N +L+  + PD
Sbjct: 659 MMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 254/553 (45%), Gaps = 34/553 (6%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------LCRKRQFEKAKRFLNSLW 127
           V  +VI+ + + SM + AL  +    ++ G E  +       L    Q   A+   + + 
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKV-GVELQVCNFLLKRLVEGNQIMYARSLFDDMK 203

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE--RGVETNVVCYNILIDGFFKKGD 185
             G  P+VYSY  +++       L    A+         GV  N   Y   + G      
Sbjct: 204 SSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK- 262

Query: 186 YMRAKEIWERLVMETSV-YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
             + K  W  L M     YP N   +N +I+G C  G+  + +E++D MKK     D  +
Sbjct: 263 --QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHS 320

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   + GLCK G+V     +  EM  +GI  + V+Y++++ G CRAG+++  FEL++ + 
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 304 RKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            +G   + + Y+I++ G  ++  ++    +W  +   N   D+  +  LI   C++  L 
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A+++                     M   G   N  TC  L++GF     +  A     
Sbjct: 441 EALEVFE------------------LMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           ++ + G  P++ +Y  +I+GLCKV +  + +    +M+++G+ PD + YS++I+G  ++ 
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +  A +L  + + +G  P++  Y  LI+GLC   K+ + + L+ +M      P+ + Y 
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +L+    K  +   ALEI+  +  E L  D   Y   + G      M  A  F+ + + +
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662

Query: 603 GILPTTITWHILV 615
           G+ PT +T+  L+
Sbjct: 663 GLTPTVVTYTDLI 675



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 225/479 (46%), Gaps = 20/479 (4%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G++P+  +Y T + GL  +  +  A      + +RG   N  C+N +I GF   G   +
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A E+++ +  +    P+V +Y+++++GLCK G       M   M +N    +  +Y S +
Sbjct: 302 AIEVFDGM-KKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLL 360

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           HGLC+AG VE A  +++ + + G   D + Y+ ++ G C+   ++ C++LW  M     +
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFV 420

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +  +Y+ LI     + ++ EA+ ++EL+       +  T  +L++G    G + +A   
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLF 480

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L++V + G        SL              T   +++G  + +K  +   +F +M ++
Sbjct: 481 LDKVRQFGV-----VPSLC-------------TYRVIIHGLCKVNKPNDMWGIFADMIKR 522

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  V Y+ +I+G  K     EA+    +M+++G KP++ TY+ LINGLC   K+   
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
           + L    + +G  PD  +Y  LI   C    ++ AL+++  M+      +   Y  L+ G
Sbjct: 583 MTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGG 642

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
             K    D A      ++ + L P +++Y   + G         A    N  L  GI P
Sbjct: 643 FSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/536 (22%), Positives = 224/536 (41%), Gaps = 92/536 (17%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           FE      ++L      P VY+  TVI   V+      AL  + E  + GVE  V   N 
Sbjct: 126 FELVPMLASNLGGSMTLPQVYA--TVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NF 181

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+    +    M A+ +++ +   +   PNV +Y+V+++                     
Sbjct: 182 LLKRLVEGNQIMYARSLFDDM-KSSGPSPNVYSYSVLMS--------------------- 219

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                      + HG  K    E  E +    VE G+  +A TY   + G C A ++K  
Sbjct: 220 ----------MYTHG-AKLCLEEALELLSEMEVE-GVRPNAATYATYLYGLCHAKQVKSA 267

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           +   +++ ++G   N   +N +I G   +G+V +AI +++ +++     D  ++ +L++G
Sbjct: 268 WNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDG 327

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK G +     +L E                  M ++G   N  + +SL++G  +A ++
Sbjct: 328 LCKQGDVLTGYYMLVE------------------MARNGITPNLVSYSSLLHGLCRAGRV 369

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A  LFK +  +G     + Y+ +++G C+       Y    +M+   + PD   YS L
Sbjct: 370 ELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSL 429

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG---------------------- 512
           I   C+ +++  AL++    +  G  P+V    IL+HG                      
Sbjct: 430 IYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGV 489

Query: 513 -------------LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
                        LC   K  D   ++++M KR  VP+ V Y+ ++DG  K  D  +A  
Sbjct: 490 VPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFR 549

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++  +++E  +P+I +Y   + GLC   ++ +        +  G+ P  I +  L+
Sbjct: 550 LYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLI 605



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 176/373 (47%), Gaps = 35/373 (9%)

Query: 263 VYREMVESGIFVDA-VTY-------------NAMIDGFCRAGKIKECFELWEVMGRKG-C 307
           V R  VE  +F DA VTY             N ++       +I     L++ M   G  
Sbjct: 149 VIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPS 208

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLRE--KNCNADSTTHGVLINGLCKNGYLNKAI 365
            NV SY++L+       K+    ++  L     +    ++ T+   + GLC         
Sbjct: 209 PNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH-------- 260

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                       ++  A + +  + + G   N Y  N++++GF    ++  AI +F  M 
Sbjct: 261 ----------AKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMK 310

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           + G  P V SY+ L++GLCK       Y  + EM   G  P++++YS L++GLC++ +++
Sbjct: 311 KCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVE 370

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A +L  +   +GF  D  +Y+I++HG C    +E    L+++M   N VP+   Y++L+
Sbjct: 371 LAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLI 430

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
               +     +ALE++  ++ + + P++++  I + G  +   + +AF FL+     G++
Sbjct: 431 YAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVV 490

Query: 606 PTTITWHILVRAV 618
           P+  T+ +++  +
Sbjct: 491 PSLCTYRVIIHGL 503



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 148/329 (44%), Gaps = 21/329 (6%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y  +IR  +E    ++A+  +  +  K    +      L+  L +   +  A  + ++++
Sbjct: 146 YATVIRVFVELSMFEDALVTY--VEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMK 203

Query: 373 EGGEGRLADAASLVNRMDKHGCKL-------------------NAYTCNSLMNGFIQASK 413
             G      + S++  M  HG KL                   NA T  + + G   A +
Sbjct: 204 SSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQ 263

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A    + + ++G       +N +I+G C   +  +A      M + G+ PD+ +YS+
Sbjct: 264 VKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSI 323

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           L++GLC+   +     +  +  + G TP++  Y+ L+HGLC AG+VE A +L+  +K + 
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              + + Y+ ++ G  +  D +   ++WN ++     PD  +Y+  +   C   ++ +A 
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
           E     +  GI P  +T  ILV    N G
Sbjct: 444 EVFELMVSDGICPNVVTCTILVHGFSNEG 472


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 265/555 (47%), Gaps = 21/555 (3%)

Query: 61  LELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFGC------EAGILC-- 111
           L L+E +  + P+ V  + +I    + S+ ++A+D   RM     C       + +LC  
Sbjct: 290 LTLMETEN-FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGC 347

Query: 112 -RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
             K+Q  + KR LN +  +G  P    + ++++    SGD   A  +  +M + G     
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407

Query: 171 VCYNILIDGFFKKGDYMRAK--EIWERLVME---TSVYPNVVTYNVMINGLCKCGRFDEC 225
           V YNILI       D +     E+ E+   E   T V  N +  +     LC  G++++ 
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             +   M       D+ TY   +  LC A  +E A  ++ EM   G+  D  TY  M+D 
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+AG I++  + +  M   GC  NVV+Y  LI   L+  KV  A  ++E +  + C  +
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC-KLNAYTCNS 403
             T+  LI+G CK G + KA QI   +   G   + D      + D     + N     +
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERM--CGSKDVPDVDMYFKQYDDDNSERPNVVIYGA 645

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF +  ++E A  L   MS +GC P  + Y+ LI+GLCKV +  EA     EM E G
Sbjct: 646 LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHG 705

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +   + TYS LI+   + K+ D+A K+  + L+    P+V +Y  +I GLC  GK ++A 
Sbjct: 706 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 765

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M+++ C PN+VTY  ++DG  + G  +  LE+   +  + + P+ ++Y + +   
Sbjct: 766 KLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 825

Query: 584 CSCSRMSDAFEFLND 598
           C    +  A   L +
Sbjct: 826 CKNGALDVAHNLLEE 840



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 242/538 (44%), Gaps = 43/538 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC    FE+A  FLN +      P+V +Y T++ G +    L     V + M   G   +
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC------KCGRFD 223
              +N L+  +   GD+  A ++ +++V +    P  V YN++I  +C       C   +
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMV-KCGHTPGYVVYNILIGSICGDKDSLSCHLLE 430

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              + +  M       +     SF   LC AG  E A  V REM+  G   D  TY+ ++
Sbjct: 431 LAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
              C A K++  F L+E M R G + +V +Y I++    + G +++A   +  +RE  C 
Sbjct: 491 GYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            +  T+  LI+   K     K +   NE              L   M   GC  N  T +
Sbjct: 551 PNVVTYTALIHAYLKA----KKVSYANE--------------LFETMLSEGCLPNIVTYS 592

Query: 403 SLMNGFIQASKLENAIFLFKEM-----------------SRKGCSPTVVSYNTLINGLCK 445
           +L++G  +A ++E A  +F+ M                       P VV Y  L++G CK
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCK 652

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           + R  EA   +  M  +G +P+ I Y  LI+GLC+  K+D A ++  +  + GF   +  
Sbjct: 653 LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYT 712

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y+ LI       + + A ++ S M + +C PN+V Y  ++DGL K G  D+A ++   + 
Sbjct: 713 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 772

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           E+  +P++++Y   + G     ++    E L     +G+ P  +T+ +L+     NGA
Sbjct: 773 EKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 830



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 262/561 (46%), Gaps = 57/561 (10%)

Query: 68  KCYCPE---DVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           +C C     + A SVI +  G+  +PD +          +    G LC   + E A    
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTS---------TYSKVLGYLCNASKMELAFLLF 506

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             +   GL  DVY+Y  +++   K+G +  A   F+EM E G   NVV Y  LI  + K 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM----------- 232
                A E++E ++ E  + PN+VTY+ +I+G CK G+ ++  ++++RM           
Sbjct: 567 KKVSYANELFETMLSEGCL-PNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDM 625

Query: 233 ------KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
                   N    +   Y + + G CK   VE A ++   M   G   + + Y+A+IDG 
Sbjct: 626 YFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 685

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ GK+ E  E+   M   G    + +Y+ LI    +  + D A  +   + E +C  + 
Sbjct: 686 CKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 745

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
             +  +I+GLCK G  ++A +++  +EE                   GC+ N  T  +++
Sbjct: 746 VIYTEMIDGLCKVGKTDEAYKLMQMMEE------------------KGCQPNVVTYTAMI 787

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +GF +  K+E  + L + M  KG +P  V+Y  LI+  CK      A++ ++EM +  W 
Sbjct: 788 DGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 847

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
                Y  +I G   +K+   +L L  +  Q    P +++Y +L+  L  A ++E AL+L
Sbjct: 848 THAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRL 905

Query: 526 YSNMK--KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
              +       V    TYN+L++ L      DKA  +++ + ++ + P++ ++   +KGL
Sbjct: 906 LEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGL 965

Query: 584 CSCSRMSDA---FEFLNDALC 601
              S++S+A    +F++  +C
Sbjct: 966 FRNSKISEALLLLDFISHMVC 986



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 155/629 (24%), Positives = 270/629 (42%), Gaps = 128/629 (20%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM------------NEIFGCE 106
           R+L ++ ++ CY    +  S++ AY  +     A  + ++M            N + G  
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSI 417

Query: 107 AG-------------------------------------ILCRKRQFEKAKRFLNSLWEK 129
            G                                      LC   ++EKA   +  +  +
Sbjct: 418 CGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD  +Y  V+  L  +  +  A  +F+EM   G+  +V  Y I++D F K G   +A
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++ W   + E    PNVVTY  +I+   K  +     E+++ M       +  TY + I 
Sbjct: 538 RK-WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 250 GLCKAGNVEGAERVYREMVESGIFVD-----------------AVTYNAMIDGFCRAGKI 292
           G CKAG +E A +++  M  S    D                  V Y A++DGFC+  ++
Sbjct: 597 GHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRV 656

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E  +L + M  +GC  N + Y+ LI GL + GK+DEA  +   + E    A   T+  L
Sbjct: 657 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSL 716

Query: 352 INGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGC 394
           I+   K    + A ++L+++ E                    G+  +A  L+  M++ GC
Sbjct: 717 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 776

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + N  T  ++++GF +  K+E  + L + M  KG +P  V+Y  LI+  CK      A++
Sbjct: 777 QPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 836

Query: 455 FVKEMLEKGWK---------------------------------PDMITYSLLINGLCQS 481
            ++EM +  W                                  P +  Y LL++ L ++
Sbjct: 837 LLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896

Query: 482 KKIDMALKLCCQFLQKGFTPDVTM------YNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           ++++MAL+L    L++  T   T+      YN LI  LC A KV+ A +L+S M K+  +
Sbjct: 897 QRLEMALRL----LEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVI 952

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           P + T+ +L+ GLF+     +AL + + I
Sbjct: 953 PEMQTFCSLIKGLFRNSKISEALLLLDFI 981



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 197/470 (41%), Gaps = 64/470 (13%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFD 223
           G +     YN L+D   +  D    +E+ +++  +   V+   +  NV++   C+ G F 
Sbjct: 160 GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFL--NVLVRKYCRSGSFS 217

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
             LE   R+K         TY   I    KA  ++ A  V+REM  + + +D  T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277

Query: 284 DGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
              C+ GK +E   L E        + V Y  LI GL E    +EA+     +R  +C  
Sbjct: 278 YSLCKVGKWREALTLMET--ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  L   LC  G LNK              +L     ++N M   GC  +    NS
Sbjct: 336 NVVTYSTL---LC--GCLNKK-------------QLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING--------------------- 442
           L++ +  +     A  L K+M + G +P  V YN LI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYS 437

Query: 443 --------------------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                               LC   ++ +A+S ++EM+ +G+ PD  TYS ++  LC + 
Sbjct: 438 EMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNAS 497

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           K+++A  L  +  + G   DV  Y I++   C AG +E A + ++ M++  C PN+VTY 
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            L+    K      A E++  +L E   P+I++Y+  + G C   +M  A
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKA 607


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 247/501 (49%), Gaps = 30/501 (5%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  L + G+ P   +   V++ L     L  A+ +F E+  +    NV  YNIL+    
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
             G    A+++++    E +  P+VVTY ++I+G C  G  +  +++ D M     E ++
Sbjct: 271 DAGRVKDARQLFD----EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNA 326

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y S +  LC  G +  A RV  +MV+  + +D   Y  ++ GFC  G +      ++ 
Sbjct: 327 TVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDE 386

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M RKG   + V+Y  +I GL    +++EA  + + +  +  + D  T+ VLI+G CK G 
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGK 446

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           + +A Q+ N + + G                 +G +  A  L++ M   G +LNA T NS
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+NG  +A  LE A+    +M      P V +Y TLI+ LCK      A+S ++EML+KG
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            KP ++TY++L+NG C S +++   KL    L+K   P+   YN L+   C    ++   
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++Y  M+ R+  PN  TYN L+ G  K  +  +AL   + ++++  R    SY+  ++ L
Sbjct: 627 EIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686

Query: 584 CSCSRMSDAFEFLNDALCRGI 604
               +  +A E  +D    G+
Sbjct: 687 NKKKKFVEARELFHDMRKEGL 707



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 246/528 (46%), Gaps = 41/528 (7%)

Query: 72  PEDVALSVIQAYGKNSMP------------DKALDVFQRMNEIFGCEAGIL----CRKRQ 115
           P    L  ++ YG +  P            D+A+++FQ +     C   IL    C   +
Sbjct: 215 PSAPLLRRLRQYGISPSPEACNAVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGR 274

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            + A++  +   E    PDV +YG +I+G    G+L  A+ + DEM   GVE N   Y  
Sbjct: 275 VKDARQLFD---EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTS 331

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           ++     KG    A  + E +V    +    + Y  +++G C  G        +D M++ 
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKVILDEAL-YTTVLSGFCNKGDLVSARRWFDEMQRK 390

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D  TY + I+GLC+A  +E AE++ +EM    + VD VTY  +IDG+C+ GK+ E 
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
           F++   M ++G   NVV+Y  L  GL + G V  A  +   +  K    ++ T+  LING
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LCK GYL +A++ + +                  MD    K + YT  +L++   ++  L
Sbjct: 511 LCKAGYLEQAMRTMAD------------------MDTACLKPDVYTYTTLIDALCKSGDL 552

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A  L +EM  KG  PT+V+YN L+NG C   R       +  MLEK   P+  TY+ L
Sbjct: 553 DRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           +   C    +    ++      +   P+   YNILI G C A  +++AL  +  M ++  
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGF 672

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL--RPDIISYNITL 580
                +Y+ L+  L K     +A E+++ + +E L    D+  + I L
Sbjct: 673 RLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 192/367 (52%), Gaps = 21/367 (5%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +YN ++   C AG++K+  +L++ M      +VV+Y ILI G    G+++ A+ + + + 
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMA--SAPDVVTYGILIHGHCALGELENAVKLLDEMV 318

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLA 380
                 ++T +  ++  LC  G+++ A++++ ++ +                   +G L 
Sbjct: 319 AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
            A    + M + G   +  T  +++NG  +A +LE A  L +EM  +      V+Y  LI
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  EA+     M+++G  P+++TY+ L +GLC+   +  A +L  +   KG  
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            +   YN LI+GLC AG +E A++  ++M      P++ TY TL+D L K+GD D+A  +
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA--V 618
              +L++ ++P I++YN+ + G C   R+    + L+  L + I P   T++ L++   +
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 619 MNNGAST 625
            NN  ST
Sbjct: 619 ENNMKST 625


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/548 (28%), Positives = 263/548 (47%), Gaps = 54/548 (9%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F+  +     L   G  PDV++   ++  L  +G +  A  VFD M ER    N   + 
Sbjct: 130 RFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPER----NEFSFG 185

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           IL  G+ + G  M A       V+++    N+V  N ++ G C+ G+ DE   + +RM+ 
Sbjct: 186 ILARGYCRAGRSMDALG-----VLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRD 240

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES---GI-FVDAVTYNAMIDGFCRAG 290
                +  T+ + I  LCKAG V  A R++ +M E    G+   D VT++ M+ GFC AG
Sbjct: 241 EGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAG 300

Query: 291 KIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E   L ++M   G L  V SYN  + GL+ NG V EA  +   +  +    +S T+ 
Sbjct: 301 MVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYN 360

Query: 350 VLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKH 392
           ++++GLCK G      ++ + V+ G                  EG  A A  +++ M + 
Sbjct: 361 IIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQK 420

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  N++T N L+    +A ++  A  L + MS KG S    S N +I+GLC+  +   A
Sbjct: 421 GCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMA 480

Query: 453 YSFVKEMLEKGWK-----------------------PDMITYSLLINGLCQSKKIDMALK 489
              V  M  +G                         PD ITYS L++ LC+  + D A K
Sbjct: 481 MDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKK 540

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              + + K  +PD  +Y+  IHG C  GK   A+++  +M+K+ C P+  TYN L+ G  
Sbjct: 541 KLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFR 600

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +  + D+ L++ + +  + + P++++YN  +K  C    ++ A   L++ L   I+P   
Sbjct: 601 EKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNIT 660

Query: 610 TWHILVRA 617
           ++ +L++A
Sbjct: 661 SFELLIKA 668



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 268/558 (48%), Gaps = 67/558 (12%)

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           A DVF R N +       LC   + E A+R  +++ E+    + +S+G +  G  ++G  
Sbjct: 147 APDVFTR-NILLQA----LCAAGRMELARRVFDAMPER----NEFSFGILARGYCRAGRS 197

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
           + AL V D M       N+V  N ++ GF ++G    A+ + ER+  E  + PNVVT+N 
Sbjct: 198 MDALGVLDSM----PTMNLVVCNTVVAGFCREGQVDEAERLVERMRDE-GLAPNVVTFNA 252

Query: 212 MINGLCKCGR-------FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
            I+ LCK GR       F++  E W+R        D  T+   + G C+AG V+ A RV 
Sbjct: 253 RISALCKAGRVLDAYRIFNDMQEKWER---GLPRPDQVTFDVMLSGFCEAGMVDEA-RVL 308

Query: 265 REMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            +++  G F+  V +YN  + G  R G + E  EL   M  +G   N  +YNI++ GL +
Sbjct: 309 VDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCK 368

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            GK  +   + + ++      D  T+  L++  C  G    A +IL+E+ + G       
Sbjct: 369 EGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFT 428

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      GR+ +A  L+ RM + G  L+  +CN +++G  + +KL+ A+ +   M 
Sbjct: 429 YNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMW 488

Query: 426 RKG-----------------------CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            +G                       C P  ++Y+TL++ LCK  RF EA   + EM+ K
Sbjct: 489 NEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGK 548

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD + Y   I+G C+  K  +A+K+     +KG  P    YN+LI G       ++ 
Sbjct: 549 DISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEI 608

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L+L S MK +   PN++TYN+L+    + G  +KA+ + + +L+  + P+I S+ + +K 
Sbjct: 609 LKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKA 668

Query: 583 LCSCSRMSDAFEFLNDAL 600
            C  S  S A    + +L
Sbjct: 669 FCKTSDFSAAQRVFDASL 686



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 253/503 (50%), Gaps = 16/503 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM---FERGV 166
            CR+ Q ++A+R +  + ++GL P+V ++   I+ L K+G +L A  +F++M   +ERG+
Sbjct: 222 FCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGL 281

Query: 167 -ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDE 224
              + V +++++ GF + G    A+ + +  +M    +   V +YN  ++GL + G   E
Sbjct: 282 PRPDQVTFDVMLSGFCEAGMVDEARVLVD--IMRCGGFLRRVESYNRWLSGLVRNGMVGE 339

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV-DAVTYNAMI 283
             E+   M     + +S+TY   + GLCK G      +V  + V+SG+   D VTY +++
Sbjct: 340 AQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKV-EDFVKSGVMTPDVVTYTSLL 398

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
             +C  G       + + M +KGC  N  +YN+L++ L + G++ EA  + E + EK  +
Sbjct: 399 HAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYS 458

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE---GRLA--DAASLVNRMDKHGCKLN 397
            D+ +  ++I+GLC+N  L+ A+ I++ +   G    GRL     + L +      C  +
Sbjct: 459 LDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPD 518

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T ++L++   +  + + A     EM  K  SP  V Y+T I+G CK  +   A   ++
Sbjct: 519 RITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLR 578

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M +KG KP   TY+LLI G  +    D  LKL  +   KG  P+V  YN LI   C  G
Sbjct: 579 DMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERG 638

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            V  A+ L   M +   VPN+ ++  L+    KT D   A  +++  L    + +++ Y+
Sbjct: 639 MVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL-YS 697

Query: 578 ITLKGLCSCSRMSDAFEFLNDAL 600
           +    L +  R  +A   L   L
Sbjct: 698 LMCTQLSTYGRWLEAMNILETVL 720



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 230/484 (47%), Gaps = 61/484 (12%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN L+    ++  +   + +++ L++ +   P+V T N+++  LC  GR +    ++D M
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLL-SGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                E++ F++     G C+AG    A  V    ++S   ++ V  N ++ GFCR G++
Sbjct: 177 P----ERNEFSFGILARGYCRAGRSMDALGV----LDSMPTMNLVVCNTVVAGFCREGQV 228

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREK----NCNADSTT 347
            E   L E M  +G   NVV++N  I  L + G+V +A  I+  ++EK        D  T
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             V+++G C+ G +++A  +++ +  GG          + R++ +         N  ++G
Sbjct: 289 FDVMLSGFCEAGMVDEARVLVDIMRCGG---------FLRRVESY---------NRWLSG 330

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF--VKEMLEKG-W 464
            ++   +  A  L +EM+ +G  P   +YN +++GLCK    G+A+    V++ ++ G  
Sbjct: 331 LVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKE---GKAFDVRKVEDFVKSGVM 387

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD++TY+ L++  C       A ++  +  QKG  P+   YN+L+  L  AG++ +A +
Sbjct: 388 TPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAER 447

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI----WNH----------------- 563
           L   M ++    +  + N ++DGL +    D A++I    WN                  
Sbjct: 448 LLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLT 507

Query: 564 --ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
                +R  PD I+Y+  +  LC   R  +A + L + + + I P ++ +   +     +
Sbjct: 508 DSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKH 567

Query: 622 GAST 625
           G ++
Sbjct: 568 GKTS 571



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 224/574 (39%), Gaps = 123/574 (21%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSL--- 126
           +V+  + +    D+A  + +RM +         F      LC+  +   A R  N +   
Sbjct: 217 TVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK 276

Query: 127 WEKGL-KPD-----------------------------------VYSYGTVINGLVKSGD 150
           WE+GL +PD                                   V SY   ++GLV++G 
Sbjct: 277 WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGM 336

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           +  A  +  EM   GV+ N   YNI++DG  K+G     +++ E  V    + P+VVTY 
Sbjct: 337 VGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKV-EDFVKSGVMTPDVVTYT 395

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +++  C  G       + D M +     +SFTY   +  L KAG +  AER+   M E 
Sbjct: 396 SLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEK 455

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-------------------- 310
           G  +D  + N +IDG CR  K+    ++ + M  +G L +                    
Sbjct: 456 GYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRC 515

Query: 311 ----VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
               ++Y+ L+  L + G+ DEA      +  K+ + DS  +   I+G CK+G  + A++
Sbjct: 516 LPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVK 575

Query: 367 ILNEVEEGG----------------EGRLADAA-SLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L ++E+ G                E   +D    L++ M   G   N  T NSL+  F 
Sbjct: 576 VLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFC 635

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG------------------- 450
           +   +  A+ L  EM +    P + S+  LI   CK   F                    
Sbjct: 636 ERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL 695

Query: 451 ---------------EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                          EA + ++ +LE         Y  +I GLC+  ++D   +L    +
Sbjct: 696 YSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLM 755

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            KG++ D   +  +I  L   GK +    L   M
Sbjct: 756 VKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKM 789



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 23/316 (7%)

Query: 59  RILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC------ 111
           ++LE+I   K   P+ V   + I  Y K+     A+ V + M E  GC+           
Sbjct: 541 KLLEMI--GKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDM-EKKGCKPSTRTYNLLIW 597

Query: 112 ---RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
               K   ++  + ++ +  KG+ P+V +Y ++I    + G +  A+ + DEM +  +  
Sbjct: 598 GFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVP 657

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+  + +LI  F K  D+  A+ +++  +  ++     V Y++M   L   GR+ E + +
Sbjct: 658 NITSFELLIKAFCKTSDFSAAQRVFDASL--STCGQKEVLYSLMCTQLSTYGRWLEAMNI 715

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + + +       F Y   I GLCK   V+   R+ + ++  G   D   +  +ID    
Sbjct: 716 LETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSE 775

Query: 289 AGKIKE----CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            GK +       ++ E+  R   L   S     R   ++G+   A S W  L  ++   D
Sbjct: 776 RGKKQHVDMLSQKMMEMAERDNGLAAPSGEFKPRS-QKHGQDKHAESDWHALLHRD---D 831

Query: 345 STTHGVLINGLCKNGY 360
           S    + I    K G+
Sbjct: 832 SARTVMKITKRVKTGW 847


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 253/499 (50%), Gaps = 20/499 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            N ++     P  + +  ++  LV       A++++ +M    VE +    NI+I+ F  
Sbjct: 46  FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH 105

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G  + A     + +++    PN +T N ++ GLC  G+  E L   D++          
Sbjct: 106 FGQVVLAFSGVSK-ILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGI 164

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EV 301
           +Y   I+G+CK G    A R+ R +    I  + V Y+ +ID  C+   + E ++L+ E+
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEM 224

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           +G+    +VV+Y+IL+ G    G+++ AI +   +  +N N D  T+ +L++ LCK    
Sbjct: 225 VGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK---- 280

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EG++ +A +++  M K    L+    ++LM+G+   +++ NA  +F
Sbjct: 281 --------------EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M++ G +P V  Y+ +INGLCK++R  EA +  +E+ +K   PD +TY+ LI+ LC+S
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +I     L  + L +G  PDV  YN LI  LC  G ++ A+ L++ MK +   PN+ T+
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+DGL K G    ALE +  +L +    ++ +Y + + GLC    + +A    +    
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506

Query: 602 RGILPTTITWHILVRAVMN 620
            G +   +T+ I++RA  +
Sbjct: 507 NGCISDAVTFEIMIRAFFD 525



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 231/470 (49%), Gaps = 20/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A++ F+ MF      +   +N ++        Y  A  +++++ + + V P+  T N++I
Sbjct: 42  AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMEL-SEVEPDYFTLNIII 100

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+         ++ K   + ++ T  + + GLC  G V+ A R + +++  G  
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
           +  ++Y  +I+G C+ G+ +    L   + R     NVV Y+++I  L ++  VDEA  +
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K  + D  T+ +L++G C  G LN+AI +LNE                  M   
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNE------------------MVLE 262

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               + YT   L++   +  K++ A  +   M +   +  VV Y+TL++G C V     A
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNA 322

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M + G  PD+  YS++INGLC+ K++D AL L  +  QK   PD   Y  LI  
Sbjct: 323 KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDC 382

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++     L+  M  R   P+++TYN L+D L K G  D+A+ ++N + ++ +RP+
Sbjct: 383 LCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++ I L GLC   R+ +A EF  D L +G      T+ +++  +   G
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEG 492



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 255/507 (50%), Gaps = 30/507 (5%)

Query: 37  SPHLFH--HILRRLIDPK---LVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMP-- 89
           +PH FH   IL  L++ K     + + + +EL E++  Y   ++ ++    +G+  +   
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 90  --DKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
              K L +  + N I        LC + + ++A RF + +  +G +    SYG +ING+ 
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
           K G+   A+ +   +    +  NVV Y+++ID   K      A +++  +V +  + P+V
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK-GISPDV 233

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           VTY+++++G C  G+ +  +++ + M       D +TY   +  LCK G V+ AE V   
Sbjct: 234 VTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           MV++ + +D V Y+ ++DG+C   ++     ++  M + G   +V  Y+I+I GL +  +
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           VDEA++++E + +KN   D+ T+  LI+ LCK+                  GR++    L
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS------------------GRISYVWDL 395

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            + M   G   +  T N+L++   +   L+ AI LF +M  +   P V ++  L++GLCK
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V R   A  F +++L KG+  ++ TY+++INGLC+   +D AL L  +    G   D   
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKR 532
           + I+I       + + A +L   M  R
Sbjct: 516 FEIMIRAFFDKDENDKAEKLVREMIAR 542



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 106/201 (52%)

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++A+  F  M     +P    +N ++  L  V+R+  A S  K+M     +PD  T +++
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           IN  C   ++ +A     + L+ G+ P+    N L+ GLC  GKV++AL+ +  +  +  
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             + ++Y  L++G+ K G+   A+ +   I    +RP+++ Y++ +  LC  + + +A++
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 595 FLNDALCRGILPTTITWHILV 615
              + + +GI P  +T+ ILV
Sbjct: 220 LYTEMVGKGISPDVVTYSILV 240


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 242/472 (51%), Gaps = 22/472 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y  V+  L K+G L  AL VF+ M       ++V YN+LI+     G++ +A ++++ +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             E  V P+  TYN +I+GLC  G  +   ++   M+      + FTY S I  L K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
            E + +V  EM+ +G   D   +N ++ GF R+  +++  E+++ M   G   + VSY+I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 316 LIRGLLENGKVDEAISIWE--LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           LI GL + GK+DE++ I     +R      +  T   LI+GLC+ G L KA+++   + E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                              GCK N YT  +L+ G  +A K+  A  LF++M++    P  
Sbjct: 252 A------------------GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDA 293

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           V+YN+LI G CK     EA    +EM    G +P ++T++ LI+G C+  K+  A +L  
Sbjct: 294 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 353

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +   KG   D   Y ILI GL  A K+++AL++Y  M+++  + + V+  + + GL KTG
Sbjct: 354 EMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 413

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + D+A  ++    +    P+  ++ I  + L    R+ DA + +  A  R I
Sbjct: 414 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 235/454 (51%), Gaps = 20/454 (4%)

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ ++    K G   +A E++E +  E+ V P++VTYNV+IN  C  G F + L+++  
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCV-PSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 232 MKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           MK+ +R E D +TY + I GLC +GN EGA ++  EM +  I  +  TY+++I    +  
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K +E +++ E M   GC  +V ++N +++G   +  +++A  +++ + E     D+ ++ 
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI+GL K G L+++++IL+E+                 M   G   N  T ++L++G  
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMA----------------MRAAGYVPNVITFSTLIHGLC 234

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +LE A+ +F  M   GC P   +Y TLI GLC+ E+  +A    ++M +    PD +
Sbjct: 235 RTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            Y+ LI G C+   +D A KL  +     G  P +  +N LI G C  GK+  A +L + 
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +    +  TY  L+ GL +    D+ALE++  + E++   D +S    + GLC    
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 414

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A+         G +P   T+ IL  +++  G
Sbjct: 415 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 448



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 227/479 (47%), Gaps = 32/479 (6%)

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEK 118
           KC    D    V+Q+  K  M  +AL+VF+ M     C   ++         C   +F K
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKS-ESCVPSLVTYNVLINSRCNAGEFGK 63

Query: 119 AKRFLNSL-WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A     S+  EK ++PD ++Y T+I+GL  SG+  GA  +  EM ++ +  NV  Y+ +I
Sbjct: 64  ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
               K+     + ++ E + M     P+V  +N ++ G  +    ++  E++  M ++  
Sbjct: 124 KSLVKEAKPEESYKVLEEM-MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY 182

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMV--ESGIFVDAVTYNAMIDGFCRAGKIKEC 295
           + D+ +Y   IHGL K G ++ + ++  EM    +G   + +T++ +I G CR G++++ 
Sbjct: 183 KPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKA 242

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            E++  M   GC  N  +Y  LI GL    KV +A  ++E + +     D+  +  LI G
Sbjct: 243 LEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 302

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            CK G +++A ++  E+  G                  G +    T N+L++GF +  KL
Sbjct: 303 YCKRGSMDEAEKLYREMSGGA-----------------GLQPTIVTFNTLIDGFCKLGKL 345

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A  L  EM  KG +    +Y  LI GL +  +  EA    K+M EK +  D ++    
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           + GLC++  ID A  +     + G  P+   + IL   L   G+VEDA +L    K R+
Sbjct: 406 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 224/465 (48%), Gaps = 36/465 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM 99
           +  +++ L    ++     + E ++ + C  P  V  +V I +        KALD+FQ M
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESC-VPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 100 NE---------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
                       +      LC     E A++ L+ + +K +  +V++Y ++I  LVK   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
              +  V +EM   G   +V  +N ++ GF +  +  +A+E+++ +V E+   P+ V+Y+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV-ESGYKPDNVSYH 190

Query: 211 VMINGLCKCGRFDECLEMWDR--MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           ++I+GL K G+ DE L++     M+      +  T+ + IHGLC+ G +E A  V+  M+
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKV 326
           E+G   +  TY  +I G CRA K+ +  EL+E M  + C+  + V+YN LI G  + G +
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKM-TQACIPPDAVAYNSLIAGYCKRGSM 309

Query: 327 DEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           DEA  ++ E+           T   LI+G CK G L +A    NE              L
Sbjct: 310 DEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA----NE--------------L 351

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M   G   +  T   L+ G  +A+KL+ A+ ++K+M  K      VS  + + GLCK
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
                +AY+  +   + G  P+  T+ +L   L +  +++ A KL
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 165/314 (52%), Gaps = 19/314 (6%)

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ +++ L + G + +A+ ++E ++ ++C     T+ VLIN  C  G   KA+ +   +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           +   E R+               + + +T N+L++G   +   E A  L  EM  K  + 
Sbjct: 72  KR--EKRV---------------EPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAA 114

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V +Y+++I  L K  +  E+Y  ++EM+  G  PD+  ++ ++ G  +S  ++ A ++ 
Sbjct: 115 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 174

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC--VPNLVTYNTLMDGLF 549
              ++ G+ PD   Y+ILIHGL   GK++++L++ S M  R    VPN++T++TL+ GL 
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC 234

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +TG+ +KALE++  +LE   +P+  +Y   + GLC   ++  A E         I P  +
Sbjct: 235 RTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294

Query: 610 TWHILVRAVMNNGA 623
            ++ L+      G+
Sbjct: 295 AYNSLIAGYCKRGS 308



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 12/291 (4%)

Query: 66  IQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRM---------NEI-FGCEAGILCRKR 114
           ++  Y P++V+  + I    K    D++L +   M         N I F      LCR  
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + EKA     S+ E G KP+ Y+Y T+I GL ++  ++ A  +F++M +  +  + V YN
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI G+ K+G    A++++  +     + P +VT+N +I+G CK G+     E+   M  
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D+ TY   I GL +A  ++ A  VY++M E    +D V+  + + G C+ G I +
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            + ++E   + G + N  ++ IL   L++ G+V++A  + E  + ++  A 
Sbjct: 418 AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M K  C +     + ++    +A  L  A+ +F+ M  + C P++V+YN LIN  C    
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 449 FGEAYSFVKEM-LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           FG+A    + M  EK  +PD  TY+ LI+GLC S   + A KL  +   K    +V  Y+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            +I  L    K E++ ++   M    C P++  +N +M G  ++ + +KA E++ H++E 
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR--GILPTTITWHILVRAVMNNG 622
             +PD +SY+I + GL    ++ ++ + L++   R  G +P  IT+  L+  +   G
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 290/628 (46%), Gaps = 70/628 (11%)

Query: 56  HVSRILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG- 108
            V R+ E +E+     QK   PE  +  S+I  + K      AL++F+ M +I G +   
Sbjct: 347 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM-DIHGPKPNG 405

Query: 109 --------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                      +  +  KA +    +  KG+ PDV +   V+ GL KSG L  A  VF E
Sbjct: 406 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 465

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +   GV  + + Y ++I    K   +  A +I+  ++ E +  P+V+  N +I+ L K G
Sbjct: 466 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI-ENNCVPDVLAVNSLIDTLYKAG 524

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           R DE   ++ ++K+   E    TY + + GL + G V+    +  EM  S    + +TYN
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 584

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW------ 333
            ++D  C+ G + +  ++   M  KGC+ ++ SYN +I GL++  + +EA SI+      
Sbjct: 585 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644

Query: 334 -----------------------------ELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
                                        +   +     D ++   L+ G+ K   + K+
Sbjct: 645 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 704

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           I+    +   G                 + +  +A  LV +    G  L     NSL+ G
Sbjct: 705 IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICG 764

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +  + ++ A  LF EM   GC P   +YN L++ + K  R  E     +EM  KG++  
Sbjct: 765 LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 824

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +TY+ +I+GL +S++++ A+ L    + +GF+P    Y  L+ GL  AG++EDA  L++
Sbjct: 825 YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 884

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M +  C  N   YN L++G    G+ +K   ++  ++++ + PDI SY I +  LC   
Sbjct: 885 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           +++D   +    L  G+ P  IT+++L+
Sbjct: 945 QLNDGLTYFRQLLEMGLEPDLITYNLLI 972



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 288/618 (46%), Gaps = 49/618 (7%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A+ +++ L++   P  AL  F SA R+P  AH+    +++L  +     V  ++ + ++
Sbjct: 56  AAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDV 115

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           ++ Q           +++A          +  F  +    G E G+         A   L
Sbjct: 116 MQRQ-----------IVKA---------NVGTFAAIFGGLGVEGGL-------RSAPVAL 148

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + E G+  + Y+Y  ++  LVKSG    AL V+  M   GV  +V  Y++L+  F K+
Sbjct: 149 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR 208

Query: 184 GDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            D      +W    ME   V PNV +Y + I  L +  RFDE   +  +M+    + D  
Sbjct: 209 RDVETV--LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 266

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I  LC AG +  A+ V+ +M +S    D VTY  ++D F   G  +   E+W  M
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 326

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G   NVV+Y  +I  L + G+V EA+ +++ +++K    +  ++  LI+G  K    
Sbjct: 327 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK---- 382

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                           R  DA  L   MD HG K N YT    +N + ++ +   AI  +
Sbjct: 383 --------------ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 428

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M  KG  P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++
Sbjct: 429 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 488

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K D A+K+    ++    PDV   N LI  L  AG+ ++A +++  +K+ N  P   TY
Sbjct: 489 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 548

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL + G   + + +   +      P++I+YN  L  LC    ++DA + L     
Sbjct: 549 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 608

Query: 602 RGILPTTITWHILVRAVM 619
           +G +P   +++ ++  ++
Sbjct: 609 KGCIPDLSSYNTVIYGLV 626



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 244/513 (47%), Gaps = 59/513 (11%)

Query: 100  NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF- 158
            N I  C    LC+      A   L S+  KG  PD+ SY TVI GLVK      A ++F 
Sbjct: 584  NTILDC----LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 639

Query: 159  ----------------------------------DEMFERGVETNVVCYNILIDGFFKKG 184
                                              D   + G +T+    + L++G  KK 
Sbjct: 640  QMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 699

Query: 185  DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               ++ E  E ++  + +  +      +I  LCK  +  E  E+  + K       +  Y
Sbjct: 700  GIEKSIEFAE-IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 758

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
             S I GL     ++ AE ++ EM E G   D  TYN ++D   ++ +I+E  ++ E M R
Sbjct: 759  NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 818

Query: 305  KGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            KG  +  V+YN +I GL+++ ++++AI ++  L  +  +    T+G L++GL K      
Sbjct: 819  KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK------ 872

Query: 364  AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         GR+ DA +L N M ++GCK N    N L+NG   A   E    LF++
Sbjct: 873  ------------AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920

Query: 424  MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            M  +G +P + SY  +I+ LCK  +  +  ++ +++LE G +PD+ITY+LLI+GL +SK+
Sbjct: 921  MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980

Query: 484  IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            ++ A+ L  +  +KG  P++  YN LI  L  AGK  +A ++Y  +  +   PN+ TYN 
Sbjct: 981  LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1040

Query: 544  LMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
            L+ G   +G  D A   +  ++     P+  +Y
Sbjct: 1041 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 267/604 (44%), Gaps = 76/604 (12%)

Query: 80   IQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLNSL 126
            I  YGK+    KA+  ++ M               +FG     L +  +   AKR  + L
Sbjct: 412  INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG-----LAKSGRLGMAKRVFHEL 466

Query: 127  WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
               G+ PD  +Y  +I    K+     A+ +F +M E     +V+  N LID  +K G  
Sbjct: 467  KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG-- 524

Query: 187  MRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
             R  E W     + E ++ P   TYN ++ GL + G+  E + + + M  +    +  TY
Sbjct: 525  -RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 583

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
             + +  LCK G V  A  +   M   G   D  +YN +I G  +  +  E F ++  M +
Sbjct: 584  NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 643

Query: 305  ----------------------KGCLNVV--------------SYNILIRGLLENGKVDE 328
                                  K  L+++              S + L+ G+L+   +++
Sbjct: 644  VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 703

Query: 329  AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
            +I   E++       D      LI  LCK     +A +++ + +  G             
Sbjct: 704  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 763

Query: 376  ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                E  +  A  L   M + GC  + +T N L++   ++ ++E  + + +EM RKG   
Sbjct: 764  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 823

Query: 432  TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            T V+YNT+I+GL K  R  +A      ++ +G+ P   TY  L++GL ++ +I+ A  L 
Sbjct: 824  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 883

Query: 492  CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
             + L+ G   + T+YNIL++G   AG  E    L+ +M  +   P++ +Y  ++D L K 
Sbjct: 884  NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943

Query: 552  GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            G  +  L  +  +LE  L PD+I+YN+ + GL    R+ +A    N+   +GI+P   T+
Sbjct: 944  GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1003

Query: 612  HILV 615
            + L+
Sbjct: 1004 NSLI 1007



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 282/599 (47%), Gaps = 66/599 (11%)

Query: 72   PEDVALSV-IQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
            P+ +  ++ I+   K S  D+A+ +F  M E      +    + I  L +  + ++A R 
Sbjct: 473  PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 532

Query: 123  LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
               L E  L+P   +Y T++ GL + G +   + + +EM+      N++ YN ++D   K
Sbjct: 533  FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 592

Query: 183  KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             G    A ++   +  +  + P++ +YN +I GL K  R++E   ++ +MKK     D  
Sbjct: 593  NGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYA 650

Query: 243  TYCSFIHGLCKAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            T C+ +    K G ++ A  + ++  ++ G   D  + +++++G  +   I++  E  E+
Sbjct: 651  TLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEI 710

Query: 302  MGRKG------------------------------------CLNVVSYNILIRGLLENGK 325
            +   G                                     L    YN LI GL++   
Sbjct: 711  IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 770

Query: 326  VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            +D A  ++  ++E  C  D  T+ +L++ + K+  + + +++  E               
Sbjct: 771  IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE--------------- 815

Query: 386  VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
               M + G +    T N++++G +++ +LE AI L+  +  +G SPT  +Y  L++GL K
Sbjct: 816  ---MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 872

Query: 446  VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
              R  +A +   EMLE G K +   Y++L+NG   +   +    L    + +G  PD+  
Sbjct: 873  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 932

Query: 506  YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            Y I+I  LC AG++ D L  +  + +    P+L+TYN L+DGL K+   ++A+ ++N + 
Sbjct: 933  YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992

Query: 566  EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            ++ + P++ +YN  +  L    + ++A +   + L +G  P   T++ L+R    +G++
Sbjct: 993  KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGST 1051



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 234/494 (47%), Gaps = 20/494 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +K +V ++  +  GL   G L  A      M E G+  N   YN L+    K G    A 
Sbjct: 121 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 180

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E++ R++M   V P+V TY+V++    K    +  L +   M+ +  + + ++Y   I  
Sbjct: 181 EVY-RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 239

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLN 309
           L +A   + A R+  +M   G   D +T+  +I   C AG+I +  ++ W++       +
Sbjct: 240 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 299

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  L+    +NG     + IW  ++    N +   +  +I+ LC+ G + +A+++ +
Sbjct: 300 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 359

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E                  M + G     Y+ NSL++GF++A +  +A+ LFK M   G 
Sbjct: 360 E------------------MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 401

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P   ++   IN   K     +A    + M  KG  PD++  + ++ GL +S ++ MA +
Sbjct: 402 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 461

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +    G +PD   Y ++I     A K ++A++++ +M + NCVP+++  N+L+D L+
Sbjct: 462 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 521

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D+A  I+  + E  L P   +YN  L GL    ++ +    L +       P  I
Sbjct: 522 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 581

Query: 610 TWHILVRAVMNNGA 623
           T++ ++  +  NGA
Sbjct: 582 TYNTILDCLCKNGA 595



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 20/379 (5%)

Query: 248 IHGLCKA-GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           IH L  A G  E  ER      +  +     + N M++     G++ +  E+++VM R+ 
Sbjct: 61  IHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQI 120

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV ++  +  GL   G +  A     +++E     ++ T+  L+  L K+G+  +A+
Sbjct: 121 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 180

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++                     M   G   +  T + LM  F +   +E  ++L +EM 
Sbjct: 181 EVYR------------------VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 222

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P V SY   I  L + +RF EAY  + +M  +G KPD+IT+++LI  LC + +I 
Sbjct: 223 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 282

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +  +  +    PD   Y  L+      G  +  +++++ MK      N+V Y  ++
Sbjct: 283 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 342

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D L + G   +ALE+++ + ++ + P+  SYN  + G     R  DA E        G  
Sbjct: 343 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPK 402

Query: 606 PTTITWHILVRAVMNNGAS 624
           P   T  + +     +G S
Sbjct: 403 PNGYTHVLFINYYGKSGES 421


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 182/681 (26%), Positives = 310/681 (45%), Gaps = 90/681 (13%)

Query: 4   SAKRLLNLLKAEK-NPHTALALF----DSATREPGYAHS----------------PHLFH 42
           SA  LL LL+    +P  AL LF     +A   P  + S                P L  
Sbjct: 6   SAANLLALLRRNAASPAVALRLFLHLSSAACPPPPRSTSFLARLVAEHPAADALLPLLHR 65

Query: 43  HILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY-GKNSMPDKALDVFQRMNE 101
           HIL    DP    H+  +L   ++     P  +A+   ++     S P     V+ R+  
Sbjct: 66  HILS-FPDPS--PHLLALLSCSDV----LPLRLAIPAFRSLRALTSAPPPTTPVYNRL-- 116

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           I         R+ + +  +     L   G +PDV++   ++  L  +G +  A  VFD M
Sbjct: 117 ILAA-----LRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAM 171

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             R    N   + IL  G+ + G  + A +     V++     N+V  N ++ G CK G 
Sbjct: 172 PAR----NEFSFGILARGYCRAGRSIDALK-----VLDGMPSMNLVVCNTVVAGFCKEGL 222

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES---GI-FVDAV 277
            +E   + +RM+      +  T+ + I  LCKAG V  A R++++M E    G+   D V
Sbjct: 223 VEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQV 282

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELL 336
           T++ M+ GFC AG + E   L ++M   G L  V SYN  + GL+ NG+V EA  +   +
Sbjct: 283 TFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREM 342

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRL 379
             +    +S T+ ++++GLCK G    A ++ N +  G                  +G +
Sbjct: 343 AHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNI 402

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
           A A  +++ M + GC  N++T N L+    +A +   A  L + M+ KG S      N +
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNII 462

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWK-----------------------PDMITYSLLIN 476
           I+GLC+  R   A   V  M E+G                         PD ITYS+LI+
Sbjct: 463 IDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILIS 522

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  + D A K   + + K  +PD  +Y+  IHG C  GK   A+++  +M+K+ C P
Sbjct: 523 ALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNP 582

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +  TYN L+ G  +    ++ +++ + + E+ + P++++YN  +K  C    ++ A   L
Sbjct: 583 STRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLL 642

Query: 597 NDALCRGILPTTITWHILVRA 617
           ++ L   ++P   ++ +L++A
Sbjct: 643 DEMLQNELVPNITSFDLLIKA 663



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 264/537 (49%), Gaps = 56/537 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E A+R  +++  +    + +S+G +  G  ++G  + AL V D M       N
Sbjct: 155 LCDAGRMELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGM----PSMN 206

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V  N ++ GF K+G    A+ + ER+ ++  + PNVVT+N  I+ LCK GR  +   ++
Sbjct: 207 LVVCNTVVAGFCKEGLVEEAERLVERMRVQ-GLAPNVVTFNARISALCKAGRVLDAYRIF 265

Query: 230 DRMKKNERE----KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMID 284
             M+++ +      D  T+   + G C AG V+ A RV  +++  G F+  V +YN  + 
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEA-RVLVDIMRCGGFLRRVESYNRWLS 324

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G  R G++ E  EL   M  +G   N  +YNI++ GL + GK  +A  +   +R    + 
Sbjct: 325 GLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSP 384

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D  T+  L++  C  G +  A +IL+E+ + G                  GR  +A  L+
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG------------------ 428
            RM++ G  L+   CN +++G  + S+L+ A+ +   M  +G                  
Sbjct: 445 ERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDS 504

Query: 429 -----CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
                C P  ++Y+ LI+ LCK  RF EA   + EM+ K   PD + Y   I+G C+  K
Sbjct: 505 SISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGK 564

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
             +A+K+     +KG  P    YN+LI G     K E+ ++L S MK++   PN++TYN+
Sbjct: 565 TSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNS 624

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           L+    + G  +KA+ + + +L+  L P+I S+++ +K  C  +    A    + AL
Sbjct: 625 LIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAAL 681



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 239/562 (42%), Gaps = 88/562 (15%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSL--- 126
           +V+  + K  + ++A  + +RM           F      LC+  +   A R    +   
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 127 WEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           W+ GL +PD  ++  +++G   +G +  A  + D M   G    V  YN  + G  + G 
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A+E+   +  E  + PN  TYN++++GLCK G+  +   + + ++      D  TY 
Sbjct: 332 VGEAQELLREMAHE-GIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYT 390

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S +H  C  GN+  A R+  EM + G   ++ TYN ++    RAG+  E   L E M  K
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEK 450

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISI----WE-----LLR--------------EKNC 341
           G  L+    NI+I GL  N ++D A+ I    WE     L R               + C
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQ-----ILNEVEEGG------------EGRLADAAS 384
             D  T+ +LI+ LCK G  ++A +     I+ ++                 G+ + A  
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           ++  M+K GC  +  T N L+ GF +  K E  + L  EM  KG SP V++YN+LI   C
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFC 630

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI-------DMALKLCCQ---- 493
           +     +A   + EML+    P++ ++ LLI   C+           D AL+ C Q    
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVL 690

Query: 494 -------------------FLQKGFTPDVTM----YNILIHGLCSAGKVEDALQLYSNMK 530
                               L+      V++    Y  +I GLC  G+V+ A  L   + 
Sbjct: 691 YCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLI 750

Query: 531 KRNCVPNLVTYNTLMDGLFKTG 552
            +  + +   +  ++D L   G
Sbjct: 751 AKRHLFDPAAFMPVIDALGDRG 772



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 226/482 (46%), Gaps = 57/482 (11%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI    ++      + +++ L++ +   P+V T N+++  LC  GR +    ++D M
Sbjct: 113 YNRLILAALRESRLDLVEALYKDLLL-SGAQPDVFTRNLLLQALCDAGRMELAQRVFDAM 171

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                 ++ F++     G C+AG    A +V   M      ++ V  N ++ GFC+ G +
Sbjct: 172 PA----RNEFSFGILARGYCRAGRSIDALKVLDGMPS----MNLVVCNTVVAGFCKEGLV 223

Query: 293 KECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREK----NCNADSTT 347
           +E   L E M  +G   NVV++N  I  L + G+V +A  I++ ++E         D  T
Sbjct: 224 EEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVT 283

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             V+++G C  G++++A  +++ +  GG          + R++ +         N  ++G
Sbjct: 284 FDVMLSGFCDAGFVDEARVLVDIMRCGG---------FLRRVESY---------NRWLSG 325

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG-WKP 466
            ++  ++  A  L +EM+ +G  P   +YN +++GLCK  +  +A   V+  +  G   P
Sbjct: 326 LVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARR-VENFIRSGVMSP 384

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D++TY+ L++  C    I  A ++  +  QKG  P+   YN+L+  L  AG+  +A +L 
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE------------------- 567
             M ++    +    N ++DGL +    D A++I + + EE                   
Sbjct: 445 ERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDS 504

Query: 568 ----RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
               R  PD I+Y+I +  LC   R  +A + L + + + I P ++ +   +     +G 
Sbjct: 505 SISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGK 564

Query: 624 ST 625
           ++
Sbjct: 565 TS 566



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 228/565 (40%), Gaps = 90/565 (15%)

Query: 53  LVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE---------- 101
           LV    R++E + +Q    P  V  +  I A  K      A  +FQ M E          
Sbjct: 222 LVEEAERLVERMRVQG-LAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPD 280

Query: 102 --IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
              F       C     ++A+  ++ +   G    V SY   ++GLV++G +  A  +  
Sbjct: 281 QVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLR 340

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           EM   G++ N   YNI++ G  K+G    A+ + E  +    + P+VVTY  +++  C  
Sbjct: 341 EMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G       + D M +     +SFTY   +  L +AG    AER+   M E G  +D    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 280 NAMIDGFCRAGKIKECFE----LWE----VMGRKG---------------CL-NVVSYNI 315
           N +IDG CR  ++    +    +WE     +GR G               CL + ++Y+I
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI  L + G+ DEA      +  K+ + DS  +   I+G CK+G  + AI++L ++E+ G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            + +  +   L++ M + G   N  T NSL+  F Q   +  A+
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFG---------------------------- 450
            L  EM +    P + S++ LI   CK+  F                             
Sbjct: 640 PLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELT 699

Query: 451 ------EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
                 EA + ++  LE         Y  +I+GLC+  ++D A  L    + K    D  
Sbjct: 700 TYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPA 759

Query: 505 MYNILIHGLCSAGKVEDALQLYSNM 529
            +  +I  L   GK +D   L + M
Sbjct: 760 AFMPVIDALGDRGKKQDVDMLSAKM 784



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 46/254 (18%)

Query: 59  RILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG-----ILCR 112
           ++LE+I   K   P+ V   + I  Y K+     A+ V + M E  GC        +L R
Sbjct: 536 KLLEMI--VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIR 592

Query: 113 ----KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
               K + E+  + ++ + EKG+ P+V +Y ++I    + G +  A+ + DEM +  +  
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWE---------------------------------R 195
           N+  +++LI  + K  D+  A+ +++                                  
Sbjct: 653 NITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILE 712

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           + +E  V      Y  +I+GLC+ G  D    +   +       D   +   I  L   G
Sbjct: 713 MALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRG 772

Query: 256 NVEGAERVYREMVE 269
             +  + +  +M+E
Sbjct: 773 KKQDVDMLSAKMME 786


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/639 (25%), Positives = 297/639 (46%), Gaps = 59/639 (9%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           M ++  R L  L    N +T      +  R+  +  +  +F  +    ++P  V   + I
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
             L   ++     D+    ++A    + P   +D F     I G      C + + ++A+
Sbjct: 270 EGLCSHKR----SDLGYEALRALRAANWP---IDTFAYTAVIRG-----FCSEMKLKEAE 317

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                +  +G+ PD Y YG +I+   K+G+LL A+A+ ++M   G++TN V  + ++   
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCL 377

Query: 181 FKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
            + G    A E+ ++     ++ ++ + V YN++++ LCK G+ +E +E+ + MK     
Sbjct: 378 CEMG---MASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMS 434

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D   Y + I G C  G +  A+ ++ EM E GI  D VTYN ++ GF R G  KE  EL
Sbjct: 435 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 494

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + +G +G   N  ++N +I GL   GKV EA +    L +K        +  +++G CK
Sbjct: 495 LDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCK 550

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
             +  KA ++ + + + G                 EG    A  L+ RM     + N   
Sbjct: 551 ANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIM 610

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L+  F +   ++ A  +F  +  +G +P V++Y  +ING C+V    EA     +M 
Sbjct: 611 YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMK 670

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E+G KPD+ITY+++++G     K+++ +    QF  KG                S  +  
Sbjct: 671 ERGIKPDVITYTVVLDG---HSKVNLKMARSLQF-SKG----------------SEEEKM 710

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           DA   +S MK+    P++V Y  L+D   KT +   A+ +++ ++   L+PDI++Y   L
Sbjct: 711 DASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALL 770

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
              CS   M  A   +N+   +GI P +    +L R ++
Sbjct: 771 SSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGIL 809



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/622 (25%), Positives = 290/622 (46%), Gaps = 85/622 (13%)

Query: 79  VIQAYGKNSMPDKALD-VFQR-----MNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKG 130
           +++AY +  M D+A+D +FQ      +  I  C      L    + + A      L   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P+ Y+YG  I  L + G+   A+ VF EM E GV  N V  +  I+G      + R+ 
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGL---CSHKRSD 279

Query: 191 EIWERL-VMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             +E L  +  + +P +   Y  +I G C   +  E  +++  M       D + Y + I
Sbjct: 280 LGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALI 339

Query: 249 HGLCKAGNVEGAERVYREMV-----------------------------------ESGIF 273
           H  CKAGN+  A  ++ +MV                                   +SGIF
Sbjct: 340 HAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIF 399

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           +D V YN ++D  C+ GK++E  EL  E+ GR+  L+VV Y  LI G    GK+ +A ++
Sbjct: 400 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 459

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL---------------NEVEEG--G 375
           +E ++E+    D  T+ +L+ G  +NG   +A+++L               N + EG   
Sbjct: 460 FEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCM 519

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G++ +A + +N ++   C L  Y+  ++++G+ +A+    A  LF  +S++G      S
Sbjct: 520 AGKVKEAEAFLNTLEDK-C-LENYS--AMVDGYCKANFTRKAYELFSRLSKQGILVKKKS 575

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
              L++ LC    + +A   ++ ML    +P+ I Y  LI   C+   +  A  +    +
Sbjct: 576 CFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLV 635

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG-------- 547
           ++G TPDV  Y ++I+G C    + +A  ++++MK+R   P+++TY  ++DG        
Sbjct: 636 ERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKM 695

Query: 548 ----LFKTGDCDKALE---IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
                F  G  ++ ++    W+ + E  ++PD++ Y + +   C  + + DA    ++ +
Sbjct: 696 ARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMI 755

Query: 601 CRGILPTTITWHILVRAVMNNG 622
            RG+ P  +T+  L+ +  + G
Sbjct: 756 ARGLQPDIVTYTALLSSCCSRG 777



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 213/457 (46%), Gaps = 21/457 (4%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSL 126
           +  S++Q   +  M  + +D F+   +        ++      LC+  + E+A   LN +
Sbjct: 369 IVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM 428

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
             + +  DV  Y T+I G    G L+ A  +F+EM ERG+E ++V YNIL+ GF + G  
Sbjct: 429 KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLK 488

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A E+ +  +    + PN  T+N +I GLC  G+  E     + ++    E     Y +
Sbjct: 489 KEALELLD-CIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSA 543

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRK 305
            + G CKA     A  ++  + + GI V   +   ++   C  G+  +   L E M    
Sbjct: 544 MVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALD 603

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N + Y  LI     +G +  A  ++++L E+    D  T+ ++ING C+   L +A 
Sbjct: 604 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 663

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE--NAIFLFKE 423
            I N+++E   G   D  +    +D H  K+N     SL   F + S+ E  +A   + E
Sbjct: 664 DIFNDMKE--RGIKPDVITYTVVLDGHS-KVNLKMARSLQ--FSKGSEEEKMDASPFWSE 718

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G  P VV Y  LI+  CK     +A +   EM+ +G +PD++TY+ L++  C    
Sbjct: 719 MKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGD 778

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           +D A+ L  +   KG  PD    ++L  G+  A KV+
Sbjct: 779 MDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 249/556 (44%), Gaps = 57/556 (10%)

Query: 78  SVIQAYGKNSMPDKALDV-FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +  Y K+S+ D+ +D+   R+ EIF         K +   A  F   L E G + +V 
Sbjct: 44  QAVYTYSKDSVGDRFIDLNTSRVVEIF------YNLKNEPNLAWSFFTQLKESGFQHNVD 97

Query: 137 SYGTVINGLVK----------SGDLLGA---------LAVFDEMFERGVETN-------V 170
           +Y  +I  L +            +++G+          A+FD + E G E         +
Sbjct: 98  TYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLI 157

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  ++L+  + + G +  A +   +        P++++ N ++N L + G+ D  + ++ 
Sbjct: 158 LVLDMLVKAYVRVGMFDEAIDALFQ-TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +K+     + +TY  FI  LC+ GN E A  V+REM E+G+  +AVT +  I+G C   
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 291 KIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +    +E L  +      ++  +Y  +IRG     K+ EA  ++  +  +    D   +G
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+  CK G L +A+                  +L N M  +G K N    +S++    
Sbjct: 337 ALIHAYCKAGNLLQAV------------------ALHNDMVSNGIKTNCVIVSSILQCLC 378

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +       +  FKE    G     V YN +++ LCK+ +  EA   + EM  +    D++
Sbjct: 379 EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 438

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI G C   K+  A  +  +  ++G  PD+  YNIL+ G    G  ++AL+L   +
Sbjct: 439 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 498

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +   PN  T+N +++GL   G   +A E + + LE++    + +Y+  + G C  +  
Sbjct: 499 GTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNTLEDKC---LENYSAMVDGYCKANFT 554

Query: 590 SDAFEFLNDALCRGIL 605
             A+E  +    +GIL
Sbjct: 555 RKAYELFSRLSKQGIL 570



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 168/357 (47%), Gaps = 18/357 (5%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           + ++  + R G   E  +      R+G + +++S N L+  L+E+GK+D A++I+  L+ 
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------EGRLADAAS-- 384
              N +  T+G+ I  LC+ G   +A+ +  E+EE G            EG  +   S  
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 385 ---LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
               +  +      ++ +   +++ GF    KL+ A  +F +M  +G +P    Y  LI+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
             CK     +A +   +M+  G K + +  S ++  LC+       +    +F   G   
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D  +YNI++  LC  GKVE+A++L + MK R    ++V Y TL+ G    G    A  ++
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 460

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             + E  + PDI++YNI + G        +A E L+    +G+ P + T + ++  +
Sbjct: 461 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 517


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 248/500 (49%), Gaps = 26/500 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G    V +Y T+I+GL KSGDL  A A+  +M + G   NVV Y  LIDG  K      A
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +  +R+ + +   P++VTYN +I+GLC   R D+   +   + +N    +  TY + + 
Sbjct: 65  IQTVKRM-LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVI 123

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA---GKIKECFELWEVMGRKG 306
             C+   ++ A  + REM+  G   + V Y   I GFC A       EC +  E++    
Sbjct: 124 WNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR 183

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +VV+YN  I GL + GK+D+ + + E +       D  T   +I+GLCK   ++ A Q
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS- 425
           +   + E                   GC  ++ T + +++   +A++L+    + + M  
Sbjct: 244 VFKGMLE------------------RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQA 285

Query: 426 -RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            + GC   V ++N  I  LC+  +F  A + +  M+E G  P++++Y+ +I+GLC+S  +
Sbjct: 286 MKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 345

Query: 485 DMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVTYN 542
           D A KL  + L  G   PDV  +N LI G C AG++  A QL   MK +N CVP++VTYN
Sbjct: 346 DDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYN 405

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
           TL+DG  K G   +A  +   +     +P++++Y   + G        +A    ++   +
Sbjct: 406 TLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465

Query: 603 GILPTTITWHILVRAVMNNG 622
           G  P  IT++ ++ A    G
Sbjct: 466 GCFPDIITYNTVLSAFSKAG 485



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 166/563 (29%), Positives = 261/563 (46%), Gaps = 77/563 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I    K   P  A+   +RM    GCE  +         LC   + + A   L  L  
Sbjct: 50  ALIDGLCKARRPHDAIQTVKRMLR-SGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVR 108

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            G  P+  +Y T++    +   L  A  +  EM  RG   N+V Y   I GF +      
Sbjct: 109 NGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSS 168

Query: 189 AKEIWE-RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
             E  +   ++E+   P+VVTYN  I+GLCK G+ D+ LEM + M +     D  T+CS 
Sbjct: 169 RYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSI 228

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG--RK 305
           I GLCKA  ++ A +V++ M+E G   D++TY+ M+D   RA ++    E+ E M   + 
Sbjct: 229 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKA 288

Query: 306 GCL------------------------------------NVVSYNILIRGLLENGKVDEA 329
           GC+                                    N++SYN +I GL ++G VD+A
Sbjct: 289 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 348

Query: 330 ISIWELLRE----KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE------------- 372
              W+L R+      C  D      LI+G CK G L++A Q+L E++             
Sbjct: 349 ---WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYN 405

Query: 373 -----EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                +   G L  A  L+  M   GCK N  T  +L+NG+ +    E A  LF EMS K
Sbjct: 406 TLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW--KPDMITYSLLINGLCQSKKID 485
           GC P +++YNT+++   K     +A    +++  K     PD ITY +LI+G C+++  +
Sbjct: 466 GCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTE 525

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED-ALQLYSNMKKRNCVPNLVTYNTL 544
             L L  +   +G++ D   YN+LI  L    +V   AL +Y  M  ++CVP+   +N+L
Sbjct: 526 QGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSL 585

Query: 545 MDGLFKTGDCDKALEIWNHILEE 567
           +    +TGD + A  +   + E+
Sbjct: 586 VRLFLRTGDVNSARSMVQEMNEK 608



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 201/423 (47%), Gaps = 37/423 (8%)

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC--------- 111
           L E+ +   P DV    S+I    K +  D A  VF+ M E  GC    L          
Sbjct: 210 LEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLE-RGCVPDSLTYSIMLDNLS 268

Query: 112 RKRQFEKAKRFLNSL--WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           R  + +     L  +   + G   +VY++   I  L +SG    A  +   M E G   N
Sbjct: 269 RANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPN 328

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ YN +IDG  K G+   A ++  +++      P+V+ +N +I+G CK GR  +  ++ 
Sbjct: 329 LLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLL 388

Query: 230 DRMK-KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             MK KN    D  TY + I G  K G+++ A+ + +EM   G   + VTY A+I+G+ +
Sbjct: 389 IEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAK 448

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADS 345
            G  +E   L++ M  KGC  ++++YN ++    + G + +A  +++ L+ K   C+ D+
Sbjct: 449 HGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDA 508

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ +LI+G C+            + E+G         +L+  M   G   ++YT N L+
Sbjct: 509 ITYRILIDGYCR----------AEDTEQG--------LTLLQEMTARGWSCDSYTYNVLI 550

Query: 406 NGFIQASKLEN-AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
               +  ++ + A+ ++++M  + C P+   +N+L+    +      A S V+EM EKG 
Sbjct: 551 AKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGH 610

Query: 465 KPD 467
             D
Sbjct: 611 LVD 613



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 37/264 (14%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M  +G   +  T  +L++G  ++  L+ A  L ++M+  GC+P VV+Y  LI+GLCK  R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             +A   VK ML  G +PD++TY+ LI+GLC + ++D A  +  + ++ GF P+   Y+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCV--------------------------------- 535
           L+   C   +++ A  L   M  R  V                                 
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 536 ----PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P++VTYNT + GL K G  DK LE+   +    + PD++++   + GLC  +R+ D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
           AF+     L RG +P ++T+ I++
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIML 264



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            ++AK  L  +   G KP+V +Y  +ING  K G    A ++FDEM  +G   +++ YN 
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           ++  F K G   +A+ ++++L  +TS   P+ +TY ++I+G C+    ++ L +   M  
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 235 NEREKDSFTYCSFIHGLC------------------------------------KAGNVE 258
                DS+TY   I  L                                     + G+V 
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596

Query: 259 GAERVYREMVESGIFVDAVTYNAM 282
            A  + +EM E G  VDA    A+
Sbjct: 597 SARSMVQEMNEKGHLVDASNLEAL 620


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 269/552 (48%), Gaps = 45/552 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           VI  + + + PD A+ ++++M EI         F       C   +   +      L + 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKL 170

Query: 130 GLKPDVYSYGTVINGL----------------VKSGDLLGALAVFDEMFERGVETNVVCY 173
           G +PDV ++ T+++GL                V++G  L A+A+FD+M E G+   V+ +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-FLEAVALFDQMVEIGLTPVVITF 229

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N LI+G   +G  + A  +  ++V +  ++ +VVTY  ++NG+CK G     L +  +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           +   + D   Y + I  LCK G+   A+ ++ EM+E GI  +  TYN MIDGFC  G+  
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 294 ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +   L  +++ R+   +V+++N LI   ++ GK+ EA  + + +  +    D+ T+  +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-------------EGRLADAASLVNRMDKHGCKLNAY 399
            G CK+   + A  + + +                   R+ +   L+  + + G   N  
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L++GF +   L  A  LF+EM   G  P  ++ N L+ G C+ E+  EA    + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
                  D + Y+++I+G+C+  K+D A  L C     G  PDV  YN++I G C    +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
            DA  L+  MK     P+  TYNTL+ G  K G+ DK++E+ + +       D  +  + 
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648

Query: 580 LKGLCSCSRMSD 591
            + +C   R+SD
Sbjct: 649 EEIIC---RVSD 657



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 242/506 (47%), Gaps = 44/506 (8%)

Query: 154 ALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNV 211
           A+  FD M   R   T V C N +I  F +      A  ++ +  ME    P N+ ++N+
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRK--MEIRRIPLNIYSFNI 146

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I   C C +    L  + ++ K   + D  T+ + +HGLC    +  A  ++  MVE+G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 272 IFVDAV----------------TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            F++AV                T+N +I+G C  G++ E   L   M  KG  ++VV+Y 
Sbjct: 207 -FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ G+ + G    A+++   + E +   D   +  +I+ LCK+G+ + A  + +E+ E 
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR +DA  L+  M +     +  T N+L++  ++  KL  A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM  +   P  V+YN++I G CK  RF +A    K M +    PD++T++ +I+ 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDV 441

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C++K++D  ++L  +  ++G   + T YN LIHG C    +  A  L+  M      P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            +T N L+ G  +    ++ALE++  I   ++  D ++YNI + G+C  S++ +A++   
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 598 DALCRGILPTTITWHILVRAVMNNGA 623
                G+ P   T+++++       A
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSA 587



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 43/459 (9%)

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           +FK  D   A + ++ +V     Y   V  N +I    +  R D  + ++ +M+      
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +++   I   C    +  +   + ++ + G   D VT+N ++ G C   +I E   L+
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 300 EVMGRKGCLN----------------VVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             M   G L                 V+++N LI GL   G+V EA ++   +  K  + 
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCN 402
           D  T+G ++NG+CK G    A+ +L+++EE   +  +   +++++R+ K G         
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG--------- 310

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
                        +A +LF EM  KG +P V +YN +I+G C   R+ +A   +++M+E+
Sbjct: 311 ----------HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD++T++ LI+   +  K+  A KLC + L +   PD   YN +I+G C   + +DA
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             ++  M      P++VT+NT++D   +    D+ +++   I    L  +  +YN  + G
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            C    ++ A +   + +  G+ P TIT +IL+     N
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 9/199 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEK 129
           ++I  + +    + A D+FQ M     C   I         C   + E+A      +   
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            +  D  +Y  +I+G+ K   +  A  +F  +   GVE +V  YN++I GF  K     A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ ++  +    P+  TYN +I G  K G  D+ +E+   M+ N    D+FT      
Sbjct: 592 NVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEE 650

Query: 250 GLCKAGNVEGAERVYREMV 268
            +C+  + E  E   R  +
Sbjct: 651 IICRVSDEEIIENYLRPKI 669


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 236/487 (48%), Gaps = 22/487 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFER---GVETNVVCYNILIDGFFKKGDYMRAK 190
           D  SY TV+  L + G L  AL +   M          N + Y  L+          +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +  R + +  V P+VVTY  +I GLC     D  +E+ + M ++  E +   Y   +HG
Sbjct: 115 GLL-RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            CK G  E   +V+ EM   GI  D V Y A+ID  CR GK+K+   + ++M  +G   N
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV+YN+LI  + + G V EA+ + + + EK    D  T+  LI GL     +++A+ +L 
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E+ +G E R+               + +  T NS+++G  +   +  A+ +   M+  GC
Sbjct: 294 EMMQG-ETRV---------------RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              +V++N LI GL +V +  +A   + EM   G +PD  TYS+LING C+ ++++ A  
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              +   +G  P+   Y  L+  +C  G +  A  L++ M  RNC  +   Y+T++ G F
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAF 456

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K+G+   A E    +++E L PD ++Y+I +        ++ A   L      G +P   
Sbjct: 457 KSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVA 516

Query: 610 TWHILVR 616
            +  L++
Sbjct: 517 VFDSLIQ 523



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 233/469 (49%), Gaps = 23/469 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     + A   LN + E G++P+V  Y  +++G  K+G       VF+EM  RG+E +
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPD 198

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LID   + G   +A  + + ++ E  + PNVVTYNV+IN +CK G   E L++ 
Sbjct: 199 VVMYTALIDSLCRHGKVKKAARVMD-MMTERGLEPNVVTYNVLINSMCKEGSVREALDLR 257

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV--ESGIFVDAVTYNAMIDGFC 287
             M +   + D  TY + I GL     ++ A  +  EM+  E+ +  D +T+N++I G C
Sbjct: 258 KNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLC 317

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G +++  ++  +M   GC  N+V++N+LI GLL   KV +A+ + + +       DS 
Sbjct: 318 KIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSF 377

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+ +LING CK   + +A   L+E+   G          +     H   L    C+  M 
Sbjct: 378 TYSILINGFCKMRQVERAESYLSEMRHQG----------MEPEPVHYIPLLKAMCDQGMM 427

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G         A  LF EM R  C     +Y+T+I+G  K      A  F+K+M+++G  P
Sbjct: 428 G--------QARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIP 478

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D +TYS+ IN   +S  +  A ++  Q    GF PDV +++ LI G  + G  E  L+L 
Sbjct: 479 DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELT 538

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
             M  ++   +    +T++  L  + +  K L+       E  + D+IS
Sbjct: 539 REMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEISKGDVIS 587



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 222/459 (48%), Gaps = 24/459 (5%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY--PNVVTYNVMINGLCKCGRFDECL 226
           + V YN ++    ++G    A  +   +  E  +   PN ++Y  ++  LC   R  + +
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +   M+      D  TY + I GLC A +V+ A  +  EM ESGI  + V Y+ ++ G+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G+ +   +++E M  +G   +VV Y  LI  L  +GKV +A  + +++ E+    + 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ VLIN +CK                  EG + +A  L   M + G + +  T N+L+
Sbjct: 235 VTYNVLINSMCK------------------EGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 406 NGFIQASKLENAIFLFKEMSR--KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            G     +++ A+ L +EM +      P ++++N++I+GLCK+    +A      M E G
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            + +++ ++LLI GL +  K+  A++L  +    G  PD   Y+ILI+G C   +VE A 
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
              S M+ +   P  V Y  L+  +   G   +A +++N  ++   + D  +Y+  + G 
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGA 455

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                   A EFL D +  G++P  +T+ I +     +G
Sbjct: 456 FKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSG 494



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 247/546 (45%), Gaps = 37/546 (6%)

Query: 20  TALALFDSATREPGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL 77
            AL L    + EP  A  P+   +  ++R L   +       +L    +Q C    DV  
Sbjct: 74  AALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR--SMQDCGVRPDVVT 131

Query: 78  --SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLW 127
             ++I+     +  D A+++   M E        ++ C     C+  ++E   +    + 
Sbjct: 132 YGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS 191

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            +G++PDV  Y  +I+ L + G +  A  V D M ERG+E NVV YN+LI+   K+G   
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYC 245
            A ++ + +  E  V P+VVTYN +I GL      DE + + + M + E     D  T+ 
Sbjct: 252 EALDLRKNMS-EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFN 310

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           S IHGLCK G +  A +V   M E+G   + V +N +I G  R  K+K+  EL + M   
Sbjct: 311 SVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASS 370

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   +  +Y+ILI G  +  +V+ A S    +R +    +   +  L+  +C  G + +A
Sbjct: 371 GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQA 430

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
             + NE                  MD++ CKL+A   +++++G  ++ + + A    K+M
Sbjct: 431 RDLFNE------------------MDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
             +G  P  V+Y+  IN   K      A   +K+M   G+ PD+  +  LI G       
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           +  L+L  +   K    D  + + ++  L ++ + +  LQ            ++++ + +
Sbjct: 532 EKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEISKGDVISPHDV 591

Query: 545 MDGLFK 550
           M+ L K
Sbjct: 592 MNMLQK 597



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 3/193 (1%)

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEK---GWKPDMITYSLLINGLCQSKKIDMALKL 490
           VSYNT++  LC+      A   ++ M  +     +P+ I+Y+ L+  LC  ++   A+ L
Sbjct: 57  VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                  G  PDV  Y  LI GLC A  V+ A++L + M +    PN+V Y+ L+ G  K
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           TG  +   +++  +    + PD++ Y   +  LC   ++  A   ++    RG+ P  +T
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236

Query: 611 WHILVRAVMNNGA 623
           +++L+ ++   G+
Sbjct: 237 YNVLINSMCKEGS 249



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 535 VPNLVTYNTLMDGLFKTGDCDKA---LEIWNHILEERL--RPDIISYNITLKGLCSCSRM 589
           V + V+YNT++  L + G  D A   L + +H  E RL  RP+ ISY   ++ LC+  R 
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSH--EPRLASRPNAISYTTLMRALCADRRA 110

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAV 618
           + A   L      G+ P  +T+  L+R +
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGL 139


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 256/543 (47%), Gaps = 33/543 (6%)

Query: 90  DKALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           D  L V  +MN +  C + I   C+     KA   L S+ +  LKPD Y Y T+++G  K
Sbjct: 385 DAMLKVGLKMNTVI-CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCK 443

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
             D + A  + DEM  +GV   VV YN L+   F  G    A  IW  L+ +  V PN V
Sbjct: 444 QEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN-LMHKRGVAPNEV 502

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TY  +++   K G FD  + +W         K    Y + I G CK   +  A+ ++ +M
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKV 326
            E G   D +TY  +IDG+C+ G + E  +L ++  R G  +    YN LI G+  + ++
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI-LNEVEEGGEGRLADAASL 385
            +   +   ++ +  + +  T+G LI G C  G ++KA       +++G    +   + +
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKI 682

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V+ + +HG                   K++ A  +  +++     P     +++   L K
Sbjct: 683 VSSLYRHG-------------------KIDEANLILHQIA--DIDPIAAHAHSV--ELPK 719

Query: 446 VE-RFGEAYSFVKEMLEKGWK---PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            + R  E    V    +K       + I Y++ I GLC+SK ID   ++    L KGF P
Sbjct: 720 SDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCP 779

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   Y  LIH   + GKV +A  L  +M     VPN+V YN L++GL K+G+ D+A  ++
Sbjct: 780 DNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLF 839

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           N +  + L P +++YN  + G C   R ++A E  +     GI P++IT+  L+  +   
Sbjct: 840 NKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYME 899

Query: 622 GAS 624
           G S
Sbjct: 900 GKS 902



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/580 (27%), Positives = 277/580 (47%), Gaps = 35/580 (6%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL-ELIEI-QKCYCPED 74
           NP  +L  F  A+++P +      +  I+  L   ++   V   L EL+ + +  Y    
Sbjct: 111 NPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA 170

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
           V   ++  Y + S      D+  ++    G     LC            +++ + G  P 
Sbjct: 171 VWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALC----------VFDNMGKCGRVPS 220

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           + S  ++++ LV++G+   AL V+++M   G+  ++  Y I+++ + K+G   R  E + 
Sbjct: 221 LRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEG---RVDEAFN 277

Query: 195 RLV-METS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
            +  ME S   PNVVTYN +I+G    G      ++   M +    ++S TY   I G C
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYC 337

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K G +E AE++   M+E  +FVD   Y  +I  +C AG++ +   + + M + G  +N V
Sbjct: 338 KRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTV 397

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
             N LI G  + G V++A  +   +++ N   DS  +  L++G CK     KA ++ +E+
Sbjct: 398 ICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEM 457

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
              G                  G +  A  + N M K G   N  T  +L++ F +    
Sbjct: 458 HNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTF 517

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ ++K+   KG + ++  YNT+I G CK+E+  +A     +M E G+ PD ITY  L
Sbjct: 518 DRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTL 577

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G C+   +  ALKL     + G +    MYN LI G+  + +++    L + MK R  
Sbjct: 578 IDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNREL 637

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            PN+VTY +L+ G    G  DKA   +  ++++ + P+II
Sbjct: 638 SPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 220/492 (44%), Gaps = 42/492 (8%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           +   +PDV SY  +++       +L    ++ E+     E  V+C N  I          
Sbjct: 125 QPKFRPDVSSYCKIVH-------ILSRARMYKEVRVYLNELVVLCKNNYI---------- 167

Query: 188 RAKEIWERLV---METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            A  +W+ LV    E S  P V  +++++    + G     L ++D M K  R     + 
Sbjct: 168 -ASAVWDELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSC 224

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S +  L + G    A  VY +M+  GI  D  +Y  M++ +C+ G++ E F   + M R
Sbjct: 225 NSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMER 284

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
             C  NVV+YN LI G +  G V  A  +  L+ EK    +S T+ +LI G CK      
Sbjct: 285 SCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK------ 338

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G++  A  L+  M +    ++ +    L++ +  A ++++A+ +   
Sbjct: 339 ------------RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M + G     V  N+LING CK+    +A   +  M +   KPD   Y+ L++G C+ + 
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              A KLC +   KG    V  YN L+  L   G VE AL +++ M KR   PN VTY T
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+D  FK G  D+A+ IW   L +     I  YN  + G C   ++  A E        G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 604 ILPTTITWHILV 615
             P  IT+  L+
Sbjct: 567 FPPDEITYRTLI 578



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 228/518 (44%), Gaps = 99/518 (19%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           S+I  Y K    +KA +V   M +       +G    +   C++  F KA +  + +  K
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+   V +Y T++  L   G +  AL +++ M +RGV  N V Y  L+D FFK G + RA
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             IW+   +      ++  YN MI G CK  +  +  E++ +MK+     D  TY + I 
Sbjct: 521 MMIWKD-ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579

Query: 250 GLCKAGN---------------VEGAERVYREMVESGIF--------------------- 273
           G CK GN               +  +  +Y  ++ +G+F                     
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI-TGVFRSEELQKLNGLLAEMKNRELS 638

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            + VTY ++I G+C  G + + +  +  M  KG   N++  + ++  L  +GK+DEA  I
Sbjct: 639 PNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLI 698

Query: 333 WELLREKNCNA-----------------------------------DSTTHGVLINGLCK 357
              + + +  A                                   ++  + + I GLCK
Sbjct: 699 LHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCK 758

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
           +  ++   +IL+++   G                  G++ +A  L + M   G   N   
Sbjct: 759 SKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVV 818

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+L+NG  ++  L+ A  LF +++RKG SPTVV+YNTLI+G CK  R  EA     +M 
Sbjct: 819 YNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMR 878

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           E+G  P  ITYS LI+GL    K + ++ L  + ++ G
Sbjct: 879 EEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 192/429 (44%), Gaps = 53/429 (12%)

Query: 223 DECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREM-------------- 267
           D  LE +    K  +   D  +YC  +H L +A       R+Y+E+              
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRA-------RMYKEVRVYLNELVVLCKNN 165

Query: 268 -VESGIFVDAVT-----------YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            + S ++ + V+           ++ ++  F   G  K    +++ MG+ G + ++ S N
Sbjct: 166 YIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCN 225

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            L+  L++NG+  +A+ ++E +       D  ++ +++N  CK                 
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCK----------------- 268

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            EGR+ +A + V  M++  C+ N  T NSL++G++    +  A  +   MS KG      
Sbjct: 269 -EGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  LI G CK  +  +A   +  M+EK    D   Y +LI+  C + ++D AL++    
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L+ G   +  + N LI+G C  G V  A ++  +MK  N  P+   YNTL+DG  K  D 
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KA ++ + +  + +   +++YN  LK L     +  A    N    RG+ P  +T+  L
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 615 VRAVMNNGA 623
           + A    G 
Sbjct: 508 LDAFFKVGT 516



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 138/302 (45%), Gaps = 37/302 (12%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R  + +K    L  +  + L P+V +YG++I G    G +  A   + +M ++G+  N++
Sbjct: 618 RSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLV---------------------------------- 197
             + ++   ++ G    A  I  ++                                   
Sbjct: 678 IGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKK 737

Query: 198 -METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            M   +  N+V YN+ I GLCK    D+   +   +       D++TYCS IH     G 
Sbjct: 738 AMSIPISNNIV-YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGK 796

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           V  A  +  +M+ +G+  + V YNA+I+G C++G +     L+  + RKG    VV+YN 
Sbjct: 797 VNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNT 856

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G  + G+  EA+ + + +RE+     S T+  LI+GL   G   +++ +LNE+ + G
Sbjct: 857 LIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916

Query: 376 EG 377
           +G
Sbjct: 917 KG 918


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 223/437 (51%), Gaps = 21/437 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  R V      +N + DGF K G   + KE+++ +V E         Y ++I+ LCK G
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMV-EAGYTLRASGYGILISCLCKVG 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            FDE  ++   M+    ++ +  Y + I+ LCK   VE A  +  +M       DA+TY 
Sbjct: 60  NFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYG 118

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +++  C+  +I +     E M  +G   +   YN ++ GL +  KV+EA  ++E + ++
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
             N +  T+  LINGLCK   +  A ++  E+   G+G +    S               
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEM--AGKGYVPTEVSY-------------- 222

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N+L++GF +   L  A  +F +M R  C P VV+Y TLI+GL K  +   A   +  M
Sbjct: 223 --NTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 280

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           ++KG  P++ TYS LI+G C+ +++D A KL  Q + +G  P V  YNIL++ LC A K+
Sbjct: 281 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 340

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           EDA +L+  M +R C P +VTYNTL+  L      D A  ++  ++ +   PD I+Y+  
Sbjct: 341 EDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400

Query: 580 LKGLCSCSRMSDAFEFL 596
             GL    ++ +A E +
Sbjct: 401 AWGLTRAGKVHEAQELM 417



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 211/421 (50%), Gaps = 18/421 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V P   T+N + +G  K GR ++  E++  M +      +  Y   I  LCK GN + A 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLL 321
           ++   M        A+ Y+ +I+  C+  +++E  EL E M R    + ++Y  ++  L 
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLC 125

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           +  ++D+A++  E +  +    D+  +  +++GLC+                  E ++ +
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ------------------EEKVEE 167

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L  +M K     N  T N+L+NG  +A ++E A  LFKEM+ KG  PT VSYNTLI+
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK +    A     +M+     P+++TY+ LI+GL +S K+  A ++    ++KG TP
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V  Y+ LI G C   +V++A +L   M  +   P +VTYN L++ L +    + A +++
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             + + R  P +++YN  L+ LC   ++  A     + + +G  P  IT+  L   +   
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407

Query: 622 G 622
           G
Sbjct: 408 G 408



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 217/434 (50%), Gaps = 23/434 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F   A    +  + E+ K     + E G       YG +I+ L K G+   A  +   M 
Sbjct: 13  FNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR 72

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +  +   + Y+ +I+   K      A+E+ E+  M     P+ +TY  ++  LCK  R 
Sbjct: 73  LKRFKRKAIAYSTIINWLCKLNRVEEARELIEK--MARYAPPDALTYGPIVERLCKTKRI 130

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+ L   + M     + D+F Y   + GLC+   VE A  ++ +MV+  I  + VTYN +
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G C+A +I+  +EL++ M  KG +   VSYN LI G  +   +  A  +++ +   NC
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  T+  LI+GL K+G +  A ++L+                   M K G   N  T 
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDG------------------MVKKGVTPNVATY 292

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + L++GF +  +++ A  L ++M  +G +PTVV+YN L+N LC+ ++  +A+   + M +
Sbjct: 293 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 352

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +   P ++TY+ L+  LC  K++D A +L  + + KG  PD   Y+ L  GL  AGKV +
Sbjct: 353 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 412

Query: 522 ALQLYSNMK--KRN 533
           A +L   MK  KRN
Sbjct: 413 AQELMEKMKLTKRN 426



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 36/227 (15%)

Query: 424 MSRKGCSPTVVSYNTLING-----------------------------------LCKVER 448
           M+ +   P   ++NT+ +G                                   LCKV  
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           F EAY  +  M  K +K   I YS +IN LC+  +++ A +L  + + +   PD   Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL-IEKMARYAPPDALTYGP 119

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           ++  LC   +++DAL     M  R   P+   YN ++ GL +    ++A  ++  ++++R
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P++++YN  + GLC   R+  A+E   +   +G +PT ++++ L+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 269/554 (48%), Gaps = 43/554 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           VI  + + + PD A+ ++++M EI         F       C   +   +      L + 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKL 170

Query: 130 GLKPDVYSYGTVINGL----------------VKSGDLLGALAVFDEMFERGVETNVVCY 173
           G +PDV ++ T+++GL                V++G  L A+A+FD+M E G+   V+ +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-FLEAVALFDQMVEIGLTPVVITF 229

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N LI+G   +G  + A  +  ++V +  ++ +VVTY  ++NG+CK G     L +  +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           +   + D   Y + I  LCK G+   A+ ++ EM+E GI  +  TYN MIDGFC  G+  
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 294 ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +   L  +++ R+   +V+++N LI   ++ GK+ EA  + + +  +    D+ T+  +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-------------EGRLADAASLVNRMDKHGCKLNAY 399
            G CK+   + A  + + +                   R+ +   L+  + + G   N  
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N+L++GF +   L  A  LF+EM   G  P  ++ N L+ G C+ E+  EA    + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
                  D + Y+++I+G+C+  K+D A  L C     G  PDV  YN++I G C    +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
            DA  L+  MK     P+  TYNTL+ G  K G+ DK++E+ + +       D  +  + 
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM- 647

Query: 580 LKGLCSCSRMSDAF 593
           +  L +  R+  +F
Sbjct: 648 VADLITDGRLDKSF 661



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 242/506 (47%), Gaps = 44/506 (8%)

Query: 154 ALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNV 211
           A+  FD M   R   T V C N +I  F +      A  ++ +  ME    P N+ ++N+
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRK--MEIRRIPLNIYSFNI 146

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I   C C +    L  + ++ K   + D  T+ + +HGLC    +  A  ++  MVE+G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 272 IFVDAV----------------TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            F++AV                T+N +I+G C  G++ E   L   M  KG  ++VV+Y 
Sbjct: 207 -FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++ G+ + G    A+++   + E +   D   +  +I+ LCK+G+ + A  + +E+ E 
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR +DA  L+  M +     +  T N+L++  ++  KL  A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM  +   P  V+YN++I G CK  RF +A    K M +    PD++T++ +I+ 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDV 441

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C++K++D  ++L  +  ++G   + T YN LIHG C    +  A  L+  M      P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            +T N L+ G  +    ++ALE++  I   ++  D ++YNI + G+C  S++ +A++   
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 598 DALCRGILPTTITWHILVRAVMNNGA 623
                G+ P   T+++++       A
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSA 587



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 43/459 (9%)

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           +FK  D   A + ++ +V     Y   V  N +I    +  R D  + ++ +M+      
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +++   I   C    +  +   + ++ + G   D VT+N ++ G C   +I E   L+
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 300 EVMGRKGCLN----------------VVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             M   G L                 V+++N LI GL   G+V EA ++   +  K  + 
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCN 402
           D  T+G ++NG+CK G    A+ +L+++EE   +  +   +++++R+ K G         
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG--------- 310

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
                        +A +LF EM  KG +P V +YN +I+G C   R+ +A   +++M+E+
Sbjct: 311 ----------HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
              PD++T++ LI+   +  K+  A KLC + L +   PD   YN +I+G C   + +DA
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             ++  M      P++VT+NT++D   +    D+ +++   I    L  +  +YN  + G
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            C    ++ A +   + +  G+ P TIT +IL+     N
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 268/572 (46%), Gaps = 31/572 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y+H P +++ +L  L   KL     R+L L+  +   
Sbjct: 173 VLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIE 232

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQFEKAKR 121
           CP +    V+ +Y +      AL V   M +  G E           +L +  + EKA +
Sbjct: 233 CPPEAFGYVMVSYSRAGKLRNALRVLTLMQKA-GVEPSLSICNTTIYVLVKGGKLEKALK 291

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL  +   G+KPD+ +Y ++I G      +  AL +   +  +G   + V Y  ++    
Sbjct: 292 FLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLC 351

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+      K + E++V  +++ P+ VTYN +I+ L K G  D+ L      +      D 
Sbjct: 352 KEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDK 411

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + +H  C+ G ++ A+ +  +M   G   D VTY A++DGFCR G+I E  ++ + 
Sbjct: 412 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + GC  N VSY  L+ GL  +GK  EA  +  +  E     ++ T+G +++GL +   
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRR--- 528

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG+L++A  L   M + G        N L+    Q  K+  A   
Sbjct: 529 ---------------EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 573

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            +E   KGC+  VV++ T+I+G C++     A S + +M   G  PD +TY+ L + L +
Sbjct: 574 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGK 633

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D A +L  + L KG  P    Y  +IH     G+V+D L L   M KR   P    
Sbjct: 634 KGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTV 691

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           YN +++ L   G+ ++A ++   +L    + D
Sbjct: 692 YNQVIEKLCDFGNLEEAEKLLGKVLRTASKVD 723



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 237/501 (47%), Gaps = 21/501 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L + +  + A+R L  +  +G++    ++G V+    ++G L  AL V   M + GVE 
Sbjct: 209 VLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEP 268

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++   N  I    K G   +A +  ER+ + T + P++VTYN +I G C   R ++ LE+
Sbjct: 269 SLSICNTTIYVLVKGGKLEKALKFLERMQV-TGIKPDIVTYNSLIKGYCDLNRIEDALEL 327

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFVDAVTYNAMIDGFC 287
              +       D  +Y + +  LCK   +E  + +  +MV  S +  D VTYN +I    
Sbjct: 328 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLS 387

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G   +     +    KG  ++ V Y+ ++    + G++DEA S+   +  + CN D  
Sbjct: 388 KHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVV 447

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  +++G C+ G +++A +IL +                  M KHGCK N  +  +L+N
Sbjct: 448 TYTAIVDGFCRLGRIDEAKKILQQ------------------MYKHGCKPNTVSYTALLN 489

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G   + K   A  +         +P  ++Y  +++GL +  +  EA    +EM+EKG+ P
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
             +  +LLI  LCQ++K+  A K   + L KG   +V  +  +IHG C  G +E AL + 
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            +M      P+ VTY  L D L K G  D+A E+   +L + L P  ++Y   +      
Sbjct: 610 DDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQW 669

Query: 587 SRMSDAFEFLNDALCRGILPT 607
            R+ D    L   L R    T
Sbjct: 670 GRVDDMLNLLEKMLKRQPFRT 690



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 23/432 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAER 262
           P    Y VM++   + G+    L +   M+K   E  S + C + I+ L K G +E A +
Sbjct: 235 PEAFGY-VMVS-YSRAGKLRNALRVLTLMQKAGVEP-SLSICNTTIYVLVKGGKLEKALK 291

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
               M  +GI  D VTYN++I G+C   +I++  EL   +  KGC  + VSY  ++  L 
Sbjct: 292 FLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLC 351

Query: 322 ENGKVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           +  K++E   + E ++   N   D  T+  LI+ L K+G+ + A+  L E ++ G     
Sbjct: 352 KEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDK 411

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       +GR+ +A SLV  M   GC  +  T  ++++GF +  +++ A  + ++
Sbjct: 412 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M + GC P  VSY  L+NGLC   +  EA   +    E  W P+ ITY  +++GL +  K
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGK 531

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +  A  L  + ++KGF P     N+LI  LC   KV +A +       + C  N+V + T
Sbjct: 532 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 591

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           ++ G  + GD + AL + + +      PD ++Y      L    R+ +A E +   L +G
Sbjct: 592 VIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 651

Query: 604 ILPTTITWHILV 615
           + PT +T+  ++
Sbjct: 652 LDPTPVTYRSVI 663



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 181/380 (47%), Gaps = 20/380 (5%)

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + +  L K    +GA RV R M   GI      +  ++  + RAGK++    +  +M 
Sbjct: 203 YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQ 262

Query: 304 RKGCLNVVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           + G    +S  N  I  L++ GK+++A+   E ++      D  T+  LI G C      
Sbjct: 263 KAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCD----- 317

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                LN +E        DA  L+  +   GC  +  +  ++M    +  K+E    L +
Sbjct: 318 -----LNRIE--------DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLME 364

Query: 423 EMS-RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           +M       P  V+YNTLI+ L K     +A +F+KE  +KG+  D + YS +++  CQ 
Sbjct: 365 KMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQK 424

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++D A  L      +G  PDV  Y  ++ G C  G++++A ++   M K  C PN V+Y
Sbjct: 425 GRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSY 484

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L++GL  +G   +A E+ N   E    P+ I+Y   + GL    ++S+A +   + + 
Sbjct: 485 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE 544

Query: 602 RGILPTTITWHILVRAVMNN 621
           +G  PT +  ++L++++  N
Sbjct: 545 KGFFPTPVEINLLIQSLCQN 564



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 75/147 (51%)

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y  +++ L ++K    A ++     ++G       +  ++     AGK+ +AL++ + 
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+K    P+L   NT +  L K G  +KAL+    +    ++PDI++YN  +KG C  +R
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           + DA E +     +G  P  ++++ ++
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVM 347



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 1/190 (0%)

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V Y T+++ L K +    A   ++ M  +G +     +  ++    ++ K+  AL++   
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G  P +++ N  I+ L   GK+E AL+    M+     P++VTYN+L+ G      
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG-ILPTTITWH 612
            + ALE+   +  +   PD +SY   +  LC   ++ +    +   +    ++P  +T++
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 613 ILVRAVMNNG 622
            L+  +  +G
Sbjct: 381 TLIHMLSKHG 390


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 169/604 (27%), Positives = 277/604 (45%), Gaps = 45/604 (7%)

Query: 54   VVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRK 113
            V H +R+L+L+  Q+ +  +D      +  GK    D   D +     + G     LC +
Sbjct: 943  VTHCNRLLKLLVEQRRW--DDARKLYDEMLGK----DSGADNYSTCVLVRG-----LCLE 991

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            R+ E+  + + + W  G  P V  Y  +I+G  + GD+   L +  EM   G    +V Y
Sbjct: 992  RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTY 1051

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
              LI+   KKGD  +   ++  +  +    PNV  YN +I+ LC C    + + +  +M 
Sbjct: 1052 GSLINWLGKKGDLEKIGSLFLEM-RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMF 1110

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
             +  + D  T+ + I GLC  G+V  AE   RE +   +  + ++Y  +I GFC  G++ 
Sbjct: 1111 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 1170

Query: 294  ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
               +L  E+MGR    +VV++  LI GL+  GKV EA+ + E + E+    D   + VLI
Sbjct: 1171 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1230

Query: 353  NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
            +GLCK   L  A  IL E+ E                      L DA  +   M+  G  
Sbjct: 1231 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC 1290

Query: 396  LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
             +  +CN+++ G+ Q   +  AI     M + GC P   +Y T+I+G  K      A  +
Sbjct: 1291 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1350

Query: 456  VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            + +M+++  KP+++TYS LING C++   D A  L      +  +P+V  Y ILI  L  
Sbjct: 1351 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 1410

Query: 516  AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC---------------DKALEI 560
              KV  A   +  M   +C PN VT + L++GL     C               D  L +
Sbjct: 1411 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVV 1470

Query: 561  WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            +  ++ +   P   +YN  +  LC  + + +A +F N    +G +P  IT+  L+    +
Sbjct: 1471 FKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 1530

Query: 621  NGAS 624
             G S
Sbjct: 1531 VGKS 1534



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 159/638 (24%), Positives = 273/638 (42%), Gaps = 90/638 (14%)

Query: 3    ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVH------ 56
            +S   L   + +  +P  A+AL         ++ SP   HH+   L DP  + H      
Sbjct: 833  LSDAHLAAAVSSLPDPDLAVALLS-------WSQSPD--HHVA--LQDPTPLAHSTLLRL 881

Query: 57   ---------VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA 107
                     V   L+ + +           +++ AY    M  KA ++ +R+ E +G   
Sbjct: 882  LARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLP 941

Query: 108  GI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
             +         L  +R+++ A++  + +  K    D YS   ++ GL             
Sbjct: 942  EVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC------------ 989

Query: 159  DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
                ER VE  +     LI+  +  G                   P+VV YNV+I+G C+
Sbjct: 990  ---LERRVEEGLK----LIEARWGAG-----------------CIPHVVFYNVLIDGYCR 1025

Query: 219  CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             G     L +   M+ N       TY S I+ L K G++E    ++ EM + G   +   
Sbjct: 1026 RGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQI 1085

Query: 279  YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
            YN++ID  C      +   + + M   GC  +++++N LI GL   G V +A        
Sbjct: 1086 YNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAI 1145

Query: 338  EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
             +  N +  ++  LI+G C  G L  A  +L  VE  G G   D                
Sbjct: 1146 RRELNPNQLSYTPLIHGFCMRGELMVASDLL--VEMMGRGHTPDVV-------------- 1189

Query: 398  AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
              T  +L++G + A K+  A+ + ++M+ +   P V  YN LI+GLCK      A + ++
Sbjct: 1190 --TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1247

Query: 458  EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            EMLEK  +PD   Y+ LI+G  +S+ +  A K+      KG  PD+   N +I G C  G
Sbjct: 1248 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFG 1307

Query: 518  KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
             + +A+   SNM+K  C+P+  TY T++ G  K G+ + AL     +++ + +P++++Y+
Sbjct: 1308 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1367

Query: 578  ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              + G C       A     +     + P  +T+ IL+
Sbjct: 1368 SLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 1405



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 210/459 (45%), Gaps = 19/459 (4%)

Query: 165  GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            G      C   L+  +   G   +A E+ ER+  +    P V   N ++  L +  R+D+
Sbjct: 902  GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961

Query: 225  CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +++D M   +   D+++ C  + GLC    VE   ++      +G     V YN +ID
Sbjct: 962  ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1021

Query: 285  GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
            G+CR G +     L   M   G L  +V+Y  LI  L + G +++  S++  +R++  + 
Sbjct: 1022 GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1081

Query: 344  DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
            +   +  +I+ LC      +A+ IL +                  M   GC  +  T N+
Sbjct: 1082 NVQIYNSVIDALCNCRSATQAMVILKQ------------------MFASGCDPDIITFNT 1123

Query: 404  LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            L+ G      +  A    +E  R+  +P  +SY  LI+G C       A   + EM+ +G
Sbjct: 1124 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1183

Query: 464  WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              PD++T+  LI+GL  + K+  AL +  +  ++   PDV +YN+LI GLC    +  A 
Sbjct: 1184 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAK 1243

Query: 524  QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             +   M ++N  P+   Y TL+DG  ++ +   A +I+  +  + + PDI+S N  +KG 
Sbjct: 1244 NILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGY 1303

Query: 584  CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            C    MS+A   +++    G +P   T+  ++      G
Sbjct: 1304 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 227/546 (41%), Gaps = 78/546 (14%)

Query: 78   SVIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
            S+I   GK    +K   +F  M         +I+      LC  R   +A   L  ++  
Sbjct: 1053 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFAS 1112

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G  PD+ ++ T+I GL   G +  A     E   R +  N + Y  LI GF  +G+ M A
Sbjct: 1113 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1172

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++   + M     P+VVT+  +I+GL   G+  E L + ++M + +   D   Y   I 
Sbjct: 1173 SDLLVEM-MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1231

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
            GLCK   +  A+ +  EM+E  +  D   Y  +IDGF R+  + +  +++E M  KG C 
Sbjct: 1232 GLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCP 1291

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            ++VS N +I+G  + G + EAI     +R+  C  D  T+  +I+G  K G LN A++ L
Sbjct: 1292 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 1351

Query: 369  NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             +                  M K  CK N  T +SL+NG+ +    ++A  LF  M  + 
Sbjct: 1352 CD------------------MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL---------- 478
             SP VV+Y  LI  L K ++   A  + + ML     P+ +T   L+NGL          
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINS 1453

Query: 479  ----------------------------------------CQSKKIDMALKLCCQFLQKG 498
                                                    C+   +  AL    +  +KG
Sbjct: 1454 ICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKG 1513

Query: 499  FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            + P+   +  L++G CS GK  +   +  N  ++     +  Y  L D       C +  
Sbjct: 1514 YVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVS 1573

Query: 559  EIWNHI 564
             +  H+
Sbjct: 1574 RVLQHL 1579


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/605 (25%), Positives = 259/605 (42%), Gaps = 69/605 (11%)

Query: 45  LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFG 104
           +RRL     +  V   L+ + ++   CPE   ++ I A+ +    D+AL  F R     G
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 105 CEAGI----------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           C A            L R+          +++ + G++P+VY+Y  +I  L ++  +  A
Sbjct: 122 CAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAA 181

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
             + DEM  +G   + V +  +I    K      A+ I   +       P   +YN +++
Sbjct: 182 RRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT------PVGASYNAVVH 235

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            LC   R  E   + D M       D+  Y S +   CKA  +  A  +   MV  G   
Sbjct: 236 ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
           +  T+  ++ GF   GK+ +   +W  M  +G   + +SYN+LIRGL   G +  A+ ++
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVF 355

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------E 376
             + + +C  D  T+  LI+G  K G L+ A+ I N++   G                 +
Sbjct: 356 SCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKK 415

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                A +L+++M    C  N  T N+L+       +   A+ +F  M R GC P   +Y
Sbjct: 416 VMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTY 475

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N L++GL +     +A   + EML  G++  +++Y+  I+GLCQ + I  A+ L  + + 
Sbjct: 476 NELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMII 535

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  PD   +N +IH  C  G V  A  +   M   NC  N+V Y +LM           
Sbjct: 536 QGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLM----------- 584

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
                                    GLCS  ++ DA  +L   L  GI P   TW++LVR
Sbjct: 585 ------------------------SGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVR 620

Query: 617 AVMNN 621
            +  +
Sbjct: 621 GIFTH 625


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 168/607 (27%), Positives = 285/607 (46%), Gaps = 34/607 (5%)

Query: 13  KAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP 72
           K + +P  AL   D    +    HS      ++  L++ K       I+  +       P
Sbjct: 16  KFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNLMNVNGISP 75

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
            +V  ++I +Y          D   R     G   G          A   +  L   G  
Sbjct: 76  LEVLDALISSYDICKSSPAVFDALVRTCTQIGATEG----------AYEVITKLQLDGFW 125

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
             V+++   ++ L+K  D+     ++ EM   G   NV  +N++I    K+G  + A  +
Sbjct: 126 VTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSV 185

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE---REKDSFTYCSFIH 249
             R  ++T ++PNVVT+N++I+G  K G  D  L++  +M+       + DS TY SF++
Sbjct: 186 IYR-SLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVN 244

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G CK GN+  AE   +EM+   I  +  TY  ++DG+ R G ++  F L + +  KG L 
Sbjct: 245 GFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLP 304

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N V YN +I  L   G ++ A  +   + +K    D  T+ ++I GLC+NGYLN+A + L
Sbjct: 305 NSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFL 364

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             + E          SLV          +A++ N ++N   +++ L  A  L   M  +G
Sbjct: 365 QMILE---------MSLVR---------DAFSHNVVINYLCRSNNLAGAKQLLANMYVRG 406

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV++ TLI+  CK  +   A    ++M++ G KP+++ Y+ +ING  +    D A+
Sbjct: 407 LVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAI 466

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L     + G   DV  YN LIHG C+ GK++ A  L+S M+    + + VTYNTL++ L
Sbjct: 467 LLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSL 525

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G   +A E+   ++   L PD ++Y I +          +  E  +  + +G++P  
Sbjct: 526 CKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDR 585

Query: 609 ITWHILV 615
            T+  +V
Sbjct: 586 QTYQTMV 592



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 54/445 (12%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   +V ++  +I  L K G L+ A++V     + G+  NVV +N++IDG  K G    A
Sbjct: 158 GYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLA 217

Query: 190 KEIWERLVMET--SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            ++  ++ + +  SV P+ VTYN  +NG CK G      E    M   E E +  TY + 
Sbjct: 218 LKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATL 277

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK-ECFELWEVMGRKG 306
           + G  + G++E A R+  E+VE G+  ++V YN++I      G ++     L +++ ++ 
Sbjct: 278 VDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRI 337

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +  +Y+I+I GL  NG ++EA    +++ E +   D+ +H V+IN LC++  L  A Q
Sbjct: 338 YPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQ 397

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L  +   G                 +G++ +A  +  +M K G K N    NS++NGF 
Sbjct: 398 LLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFA 457

Query: 410 QAS----------------------------------KLENAIFLFKEMSRKGCSPTVVS 435
           +                                    K++ A  LF EM   G   + V+
Sbjct: 458 KEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVT 517

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YNTLIN LCK     +A   +K M+ +G  PD +TY++LI    +    +  ++L    +
Sbjct: 518 YNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMV 577

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVE 520
            KG  PD   Y  ++  L     VE
Sbjct: 578 LKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 222/473 (46%), Gaps = 30/473 (6%)

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYP------NVVTYNVMINGLCKCGRFDECLEMWDR 231
           D  F  G+ M    I    V++  +        +   ++ ++    + G  +   E+  +
Sbjct: 59  DALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++ +        + +F+  L K  +V    ++Y+EMV  G   +  T+N +I    + G+
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI---WELLREKNCNADSTT 347
           + E   +     + G   NVV++N++I G ++ G +D A+ +    E++   +   DS T
Sbjct: 179 LVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVT 238

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRM 389
           +   +NG CK G L  A +   E+  G E                  G L +A  L + +
Sbjct: 239 YNSFVNGFCKIGNLAVAEEFKKEML-GKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + G   N+   NS+++       +E A  L  +M  K   P   +Y+ +I GLC+    
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA+ F++ +LE     D  +++++IN LC+S  +  A +L      +G  PDV  +  L
Sbjct: 358 NEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTL 417

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I   C  GKVE+A+Q+Y  M K    PNL+ YN++++G  K G  D A+ + + +    L
Sbjct: 418 IDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL 477

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             D+++YN  + G C+C ++  AF   ++    GIL + +T++ L+ ++   G
Sbjct: 478 F-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAG 529



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 199/463 (42%), Gaps = 69/463 (14%)

Query: 33  GYAHSPHLFHHILRRL-IDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPD 90
           GY  + + F+ I+  L  + +LV  VS I     ++    P  V  + +I    K    D
Sbjct: 158 GYIENVNTFNLIIYALGKEGRLVEAVSVIYR--SLKTGIWPNVVTFNMIIDGAIKMGAMD 215

Query: 91  KALDVFQRMNEIFGCEAGI-----------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
            AL + ++M  + GC                C+      A+ F   +  K ++P+V +Y 
Sbjct: 216 LALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYA 275

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           T+++G  + G L  A  + DE+ E+G+  N V YN +I     +GD M    +    +++
Sbjct: 276 TLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGD-MEGASLLLSDMID 334

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             +YP+  TY+++I GLC+ G  +E  +    + +    +D+F++   I+ LC++ N+ G
Sbjct: 335 KRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAG 394

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM----------------- 302
           A+++   M   G+  D VT+  +ID  C+ GK++   +++E M                 
Sbjct: 395 AKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVIN 454

Query: 303 ------------------GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
                              R G  +VV+YN LI G    GK+D+A +++  +R     A 
Sbjct: 455 GFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILAS 514

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LIN LCK G+                  +  A  L+  M   G   +  T   L
Sbjct: 515 HVTYNTLINSLCKAGH------------------VLQAKELMKMMVLRGLIPDYVTYTIL 556

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +  F +    E  I L   M  KG  P   +Y T++  L + E
Sbjct: 557 ITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEE 599


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 236/471 (50%), Gaps = 36/471 (7%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC--------- 219
           NV+ YN++I+G FK+G+  +A  ++  ++ +    PN+VTYN +I+GLCK          
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQ-GFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 220 -------GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
                  G+ +E + +  +M     + D  TY   I   CK G    A  ++  MV  G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             DA TY  ++ G+   G + +  +L  +M + G  L    +NILIR   +N  +D+A++
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
            +  +R+K  + +  T+  +I+ LCK                   GR+ DA S  ++M  
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCK------------------AGRVEDAVSHFSQMVS 358

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   +  T  SL++G     + +    L  EM  +G  P  +  NT+++ LCK  R  E
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+ F  +++  G KPD+++Y++LI+G C   K+D ++KL  + +  G  PD   Y+ L++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G+V+DAL LY  M  ++  PN +TYN ++ GLF  G    A E +  I++  ++ 
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I +YNI L GLC  S + +A         +       T++I++  ++  G
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVG 589



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 258/523 (49%), Gaps = 33/523 (6%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+V SY  VINGL K G++  A  +F EM  +G   N+V YN +IDG  K     +A+ +
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 193 WERLV----METSV-----------YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            +++     +E +V            P+VVTY+++I+  CK GR  E   ++D M +  +
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             D++TY + +HG    G +     +   M++ GI ++   +N +I  + +   + +   
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 298 LWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
            +  M +KG   NVV+Y  +I  L + G+V++A+S +  +  +  + D  T   LI+GLC
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 357 KNG-----------YLNKAIQ----ILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAY 399
             G            +N+ I      LN + +    EGR+ +A    +++   G K +  
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           +   L++G+    K++ +I L   M   G  P  V+Y+ L+NG CK  R  +A +  +EM
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             K  KP+ ITY+++++GL  + ++  A +   + +  G    +  YNI++ GLC    V
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++AL+++  ++ +     + T+N ++ GL K G    A  +++ IL   L PD I Y + 
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++       + ++ E        G    + T + +VR ++  G
Sbjct: 617 IQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 252/517 (48%), Gaps = 45/517 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ + +KA    + +  +G  P++ +Y +VI+GL K+  +  A AV  +MF++G    
Sbjct: 149 LFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEE 208

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS---VYPNVVTYNVMINGLCKCGRFDECL 226
            V                       RL+ + S   + P+VVTY+++I+  CK GR  E  
Sbjct: 209 AV-----------------------RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEAR 245

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            ++D M +  +  D++TY + +HG    G +     +   M++ GI ++   +N +I  +
Sbjct: 246 NIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAY 305

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            +   + +    +  M +KG   NVV+Y  +I  L + G+V++A+S +  +  +  + D 
Sbjct: 306 AKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDI 365

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T   LI+GLC  G   K  ++  E              ++NR    G   NA   N++M
Sbjct: 366 ITFTSLIHGLCTIGEWKKVEKLSFE--------------MINR----GIHPNAIFLNTIM 407

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +   +  ++  A   F ++   G  P VVSY  LI+G C   +  E+   +  M+  G +
Sbjct: 408 DSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLR 467

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD +TYS L+NG C++ ++D AL L  +   K   P+   YNI++HGL  AG+V  A + 
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           Y  +        + TYN ++ GL +    D+AL ++  +  +  + ++ ++NI + GL  
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             R+ DA    +  L  G++P  I + +++++ +  G
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG 624



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 252/528 (47%), Gaps = 34/528 (6%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LFH +L +   P +V + S I  L + Q      D A +V+Q        ++A+ + ++M
Sbjct: 161 LFHEMLGQGFPPNIVTYNSVIDGLCKAQAM----DKAEAVLQQMFDKGQLEEAVRLLKKM 216

Query: 100 NEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD 150
           +   G +  ++         C+  +  +A+   +S+  +G  PD Y+Y T+++G    G 
Sbjct: 217 SG-GGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGA 275

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           L+    +   M + G+      +NILI  + K     +A   +  +  +    PNVVTY 
Sbjct: 276 LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM-RQKGFSPNVVTYT 334

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
            +I+ LCK GR ++ +  + +M       D  T+ S IHGLC  G  +  E++  EM+  
Sbjct: 335 TVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           GI  +A+  N ++D  C+ G++ E  + ++ +   G   +VVSY ILI G   +GK+DE+
Sbjct: 395 GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           I +   +       D+ T+  L+NG CKNG                  R+ DA +L   M
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNG------------------RVDDALALYREM 496

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
                K NA T N +++G   A ++  A   + ++   G    + +YN ++ GLC+    
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA    + +  K ++ ++ T++++I GL +  +I  A  L    L  G  PD  +Y ++
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           I      G +E++ +L+ +M+K  C  N  T N ++  L + GD  +A
Sbjct: 617 IQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 190/430 (44%), Gaps = 83/430 (19%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQA 82
           +FDS  R  G     + +  +L        +V +  +L L+ IQ     ED   ++ I+A
Sbjct: 247 IFDSMVRR-GQNPDAYTYRTLLHGYATKGALVDMHDLLALM-IQDGIPLEDHVFNILIRA 304

Query: 83  YGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
           Y KN   DKA+  F  M +         +     ILC+  + E A    + +  +GL PD
Sbjct: 305 YAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPD 364

Query: 135 VYSYGTVINGLV-----------------------------------KSGDLLGALAVFD 159
           + ++ ++I+GL                                    K G +L A   FD
Sbjct: 365 IITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFD 424

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           ++   GV+ +VV Y ILIDG+   G    + ++  R+V    + P+ VTY+ ++NG CK 
Sbjct: 425 QIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMV-SIGLRPDNVTYSALLNGYCKN 483

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           GR D+ L ++  M   + + ++ TY   +HGL  AG V  A   Y ++V+SGI +   TY
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTY 543

Query: 280 NAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE---- 334
           N ++ G C    + E   +++ +  ++  L V ++NI+I GLL+ G++ +A S++     
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILP 603

Query: 335 ------------------------------LLREKN-CNADSTTHGVLINGLCKNGYLNK 363
                                         L  EKN C A+S T   ++  L + G + +
Sbjct: 604 SGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRR 663

Query: 364 AIQILNEVEE 373
           A   L +++E
Sbjct: 664 AGTYLTKIDE 673



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 160/348 (45%), Gaps = 62/348 (17%)

Query: 329 AISIWELLREKNCN---ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
           A+S++  + +   N    D+ T G+LI   C  G L+ A++         E R + AA  
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALE--------EESRGSRAAVH 126

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           +   D + C  N  + N ++NG  +  +++ A  LF EM  +G  P +V+YN++I+GLCK
Sbjct: 127 MMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCK 186

Query: 446 VERFGEAYSFVKEMLEK----------------GWKPDMITYSLLINGLCQSKKIDMALK 489
            +   +A + +++M +K                G +PD++TYSLLI+  C+  +   A  
Sbjct: 187 AQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARN 246

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVED---------------------------- 521
           +    +++G  PD   Y  L+HG  + G + D                            
Sbjct: 247 IFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYA 306

Query: 522 -------ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
                  A+  +  M+++   PN+VTY T++D L K G  + A+  ++ ++ E L PDII
Sbjct: 307 KNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDII 366

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++   + GLC+        +   + + RGI P  I  + ++ ++   G
Sbjct: 367 TFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG 414



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 36/246 (14%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLC-----KVERFGEAY--SFVKEMLEKG--- 463
           LE+A+ LF E+  +  S +V ++N ++  +        +R G A   S    M + G   
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 464 WKPDMITYSLLINGLCQSKKIDMALK--------LCCQFLQKGFT--PDVTMYNILIHGL 513
              D  T+ +LI   C    +D AL+                G+   P+V  YN++I+GL
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI-----LEER 568
              G+V+ A  L+  M  +   PN+VTYN+++DGL K    DKA  +   +     LEE 
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 569 LR-----------PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +R           PD+++Y++ +   C   R ++A    +  + RG  P   T+  L+  
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 618 VMNNGA 623
               GA
Sbjct: 270 YATKGA 275



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 10/216 (4%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRM-------NEI-FGCEAGILCRKRQFEKAKRF 122
           P++V  S ++  Y KN   D AL +++ M       N I +      L    +   A+ F
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
              + + G++  + +Y  V+ GL ++  +  AL +F  +  +  +  V  +NI+I G  K
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    AK ++   ++ + + P+ + Y +MI    + G  +E  E++  M+KN    +S 
Sbjct: 588 VGRIGDAKSLFSA-ILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSR 646

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           T  + +  L + G+V  A     ++ E    V+A T
Sbjct: 647 TLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST 682


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 176/647 (27%), Positives = 285/647 (44%), Gaps = 62/647 (9%)

Query: 25  FDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI---------EIQKCYC---- 71
           F  A    G++HS + F  I+  L    L + V   L  I         ++ + +     
Sbjct: 108 FFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLD 167

Query: 72  -PED--------VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRK 113
            P+D        VA  +I+ + +N+M   A DVF +    FG E  IL            
Sbjct: 168 SPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARR-FGLELNILSCNFLLNCFAEA 226

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVIN-----GLVKSGDLLGALAVFDEMFERGVET 168
            Q E  +     L + G  P+V++Y  ++N        K+ D++ A  V +EM   G   
Sbjct: 227 NQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESP 286

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV--YP-NVVTYNVMINGLCKCGRFDEC 225
            VV Y   I G  + G      E   RL+ +  +   P N   YN +I+  C+ G   E 
Sbjct: 287 TVVTYGAYIHGLCRAG----CVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEA 342

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            E+ + M+ +     +++Y   I GLCK G VE A  +  EMV+S +    VTY+++ DG
Sbjct: 343 FELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDG 402

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C++G  +    ++  +G +G   +V+SYN LI G +    +  A  +   +R      +
Sbjct: 403 LCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPN 462

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVN 387
           S T   LI+G CK   L+KA+++   + + G                 EG   +A  L+N
Sbjct: 463 SFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLIN 522

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            +   G   N+YT N ++    +  K E A  +   M +    P  + YNTLI+G  K  
Sbjct: 523 EVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQS 582

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
              +A     +ML+ G  P ++TY++LIN      K+  A  L  + ++KG  PD  ++ 
Sbjct: 583 NPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFT 642

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            +I G C  G ++ A  LY  M +    PN+VTY  L+DG FK    DKA  ++N +  +
Sbjct: 643 CIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRD 702

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            + PD ++Y   + G  S        E  N+    G+ P    +  L
Sbjct: 703 NVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 251/495 (50%), Gaps = 33/495 (6%)

Query: 134 DVYSYGTVI--NGLVK----SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           D +  G++I  N L+K    +  L+ A  VF +    G+E N++  N L++ F +     
Sbjct: 171 DAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL------EMWDRMKKNEREKDS 241
             + ++E L  ++   PNV TY +M+N  CK G F + +      E+ + M+ N      
Sbjct: 231 FIRSLFEEL-KDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIVKATEVLEEMEMNGESPTV 288

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY ++IHGLC+AG VE A R+ R++      +++  YNA+I  FCR G++ E FEL E 
Sbjct: 289 VTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLED 348

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G      SY+ILI GL + G+V++A+ + E + + N      T+  L +GLCK+G 
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG- 407

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                  L E+          + S+ + +   G K +  + N+L+NGF+    + +A  L
Sbjct: 408 -------LTEI----------SLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKL 450

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             EM   G  P   ++N LI+G CK +R  +A      ML+ G + ++ T +++ +   +
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
                 ALKL  +    G  P+   YNI+I  LC   K E A ++   M K N  P  + 
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YNTL+DG  K  +  KAL ++  +L+  + P I++Y + +    + S+M +A+    + +
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 601 CRGILPTTITWHILV 615
            +G++P  I +  ++
Sbjct: 631 KKGLVPDEIIFTCII 645


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 237/483 (49%), Gaps = 24/483 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   + ++   L ++  KG  PDV     +I G     ++  A+ V  E+ E+  + +V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI+GF K      A  + +R+       P+ VTYN+MI  LC  G+ D  L++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++  +  +    TY   I      G V+ A ++  EM+  G+  D  TYN +I G C+ G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +   FE+   +  KGC  +V+SYNIL+R LL  GK +E   +   +  + C+ +  T+ 
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI  LC++G + +A+ +L  ++E G                 EGRL  A   +  M   
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N+++    +  K + A+ +F ++   GCSP   SYNT+ + L        A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM+  G  PD ITY+ +I+ LC+   +D A +L        F P V  YNI++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C A ++EDA+ +  +M    C PN  TY  L++G+   G   +A+E+ N +    +R D
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL----VRID 573

Query: 573 IIS 575
            IS
Sbjct: 574 AIS 576



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 211/435 (48%), Gaps = 21/435 (4%)

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G+Y+ +  + E +V +    P+V+    +I G        + + + + ++K   + D 
Sbjct: 101 RSGNYIESLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F Y + I+G CK   ++ A RV   M       D VTYN MI   C  GK+    ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +    C   V++Y ILI   +  G VDEA+ + + +  +    D  T+  +I G+CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           +++A +                  +V  ++  GC+ +  + N L+   +   K E    L
Sbjct: 279 VDRAFE------------------MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             +M  + C P VV+Y+ LI  LC+  +  EA + +K M EKG  PD  +Y  LI   C+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D+A++     +  G  PD+  YN ++  LC  GK + AL+++  + +  C PN  +
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YNT+   L+ +GD  +AL +   ++   + PD I+YN  +  LC    + +AFE L D  
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500

Query: 601 CRGILPTTITWHILV 615
                P+ +T++I++
Sbjct: 501 SCEFHPSVVTYNIVL 515



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 226/453 (49%), Gaps = 28/453 (6%)

Query: 109 ILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ILC K        R   KA R +  + EK  +PDV++Y  +ING  K   +  A  V D 
Sbjct: 125 ILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDR 183

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  +    + V YNI+I     +G    A ++  +L+ + +  P V+TY ++I      G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEG 242

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE L++ D M     + D FTY + I G+CK G V+ A  + R +   G   D ++YN
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++      GK +E  +L   M  + C  NVV+Y+ILI  L  +GK++EA+++ +L++EK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ ++  LI   C+ G L+ AI+ L  +   G                  G+   A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +  ++ + GC  N+ + N++ +    +     A+ +  EM   G  P  ++YN++I+ 
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+     EA+  + +M    + P ++TY++++ G C++ +I+ A+ +    +  G  P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            T Y +LI G+  AG   +A++L +++ + + +
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 17/391 (4%)

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           H  C++GN   +  +   MV  G   D +    +I GF     I +   + E++ + G  
Sbjct: 97  HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP 156

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +YN LI G  +  ++D+A  + + +R K+ + D+ T+ ++I  LC  G L+ A+++L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           N++                     EG + +A  L++ M   G K + +T N+++ G  + 
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++ A  + + +  KGC P V+SYN L+  L    ++ E    + +M  +   P+++TY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S+LI  LC+  KI+ A+ L     +KG TPD   Y+ LI   C  G+++ A++    M  
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C+P++V YNT++  L K G  D+ALEI+  + E    P+  SYN     L S      
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   + + +  GI P  IT++ ++  +   G
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREG 487



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 236/480 (49%), Gaps = 42/480 (8%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRILELIEIQKC 69
           L +F  + R   Y  S HL   ++R+  +P +++            ++ + + ++EI + 
Sbjct: 93  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152

Query: 70  YCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           +   DV    ++I  + K +  D A  V  RM           +    G LC + + + A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            + LN L     +P V +Y  +I   +  G +  AL + DEM  RG++ ++  YN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K+G   RA E+   L ++    P+V++YN+++  L   G+++E  ++  +M   + + 
Sbjct: 273 MCKEGMVDRAFEMVRNLELK-GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY   I  LC+ G +E A  + + M E G+  DA +Y+ +I  FCR G++    E  
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           E M   GCL ++V+YN ++  L +NGK D+A+ I+  L E  C+ +S+++  + + L  +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G   +A+ ++ E                  M  +G   +  T NS+++   +   ++ A 
Sbjct: 452 GDKIRALHMILE------------------MMSNGIDPDEITYNSMISCLCREGMVDEAF 493

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M      P+VV+YN ++ G CK  R  +A + ++ M+  G +P+  TY++LI G+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 1/209 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ + + A  FL ++   G  PD+ +Y TV+  L K+G    AL +F ++ E G   N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN +    +  GD +RA  +   + M   + P+ +TYN MI+ LC+ G  DE  E+ 
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEM-MSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+  E      TY   + G CKA  +E A  V   MV +G   +  TY  +I+G   A
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIR 318
           G   E  EL   + R   ++  S+  L R
Sbjct: 557 GYRAEAMELANDLVRIDAISEYSFKRLHR 585


>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
          Length = 423

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 52/369 (14%)

Query: 7   RLLNLLKAEKNPHTALALFDS-ATREPGYAHSPHLFHHILRRL--IDPKLVVHVSRILEL 63
           RLL L+K+E++   AL+  +   +  P +     L  H+LRRL    P  +  +  +L  
Sbjct: 56  RLLELIKSERDLANALSRLELLVSTRPAFPPPQPLIFHLLRRLATTSPSHLPRLLDLLPR 115

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI-------------- 109
           +  +  +  E  AL V+ A+ +  MPD AL  F+ +  + GC  GI              
Sbjct: 116 MRRRPRFS-ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRAR 174

Query: 110 ----------------------------------LCRKRQFEKAKRFLNSLWEKGLKPDV 135
                                             LC +   ++A    +SL  +G+ PD 
Sbjct: 175 RYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDR 234

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+++GLVK   L  AL + DEM + GV+ + VCYN L+ G FK G + +A ++WE+
Sbjct: 235 VTYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQ 294

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           LV +    PN+ TY VM++GLCK GRF E  E+W RM  N  + D+ TY   IHGLC++G
Sbjct: 295 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSG 354

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
           +V+ A RVY +MV++G+ +D   YN++I GFC+ G+  E ++ W+  G  G   + +YN+
Sbjct: 355 DVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIRQITTYNV 414

Query: 316 LIRGLLENG 324
           +++GLL++G
Sbjct: 415 MMKGLLDSG 423



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 149/281 (53%), Gaps = 25/281 (8%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVM-----GRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           ++NA++D F RA +  E    +  +     GR+   N+ +YNI++R L   G VD A+S+
Sbjct: 162 SHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGDVDRAVSL 221

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  LR +    D  T+  L++GL K+  L+ A+ +L+E                  M  +
Sbjct: 222 FSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDE------------------MPDY 263

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGLCKVERFGE 451
           G + +A   N+L++G  +    E AI +++++ R  G SP + +Y  +++GLCK+ RF E
Sbjct: 264 GVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKE 323

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A      M+    +PD +TY +LI+GLC+S  +D A ++    ++ G   DV +YN LI 
Sbjct: 324 AGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIK 383

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           G C  G+  +A + + +    + +  + TYN +M GL  +G
Sbjct: 384 GFCKVGRTGEAWKFWDSTGF-SGIRQITTYNVMMKGLLDSG 423



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 147/283 (51%), Gaps = 16/283 (5%)

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           CN    +H  L++   +    ++A      +  G  GR         R+       N  T
Sbjct: 156 CNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGR---------RLAP-----NLQT 201

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N ++        ++ A+ LF  + R+G +P  V+Y+TL++GL K ++   A   + EM 
Sbjct: 202 YNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMP 261

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKV 519
           + G + D + Y+ L++G  ++   + A+K+  Q ++  G +P++  Y +++ GLC  G+ 
Sbjct: 262 DYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 321

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A +++S M   N  P+ VTY  L+ GL ++GD D A  +++ +++  L  D+  YN  
Sbjct: 322 KEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSL 381

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +KG C   R  +A++F +     GI   T T++++++ ++++G
Sbjct: 382 IKGFCKVGRTGEAWKFWDSTGFSGIRQIT-TYNVMMKGLLDSG 423



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 25/284 (8%)

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN----ADSTTHGVLINGLCKNGY 360
           GC   + S+N L+   +   +  EA + +  L    C      +  T+ +++  LC  G 
Sbjct: 155 GCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGD 214

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           +++A+                  SL + + + G   +  T ++LM+G ++  +L+NA+ L
Sbjct: 215 VDRAV------------------SLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDL 256

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGLC 479
             EM   G     V YN L++G  K   F +A    ++++ + G  P++ TY ++++GLC
Sbjct: 257 LDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLC 316

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  +   A ++  + +     PD   Y ILIHGLC +G V+ A ++YS+M K   V ++ 
Sbjct: 317 KLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVA 376

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            YN+L+ G  K G   +A + W+      +R  I +YN+ +KGL
Sbjct: 377 VYNSLIKGFCKVGRTGEAWKFWDSTGFSGIR-QITTYNVMMKGL 419



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 25/297 (8%)

Query: 153 GALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET---SVYPNVVT 208
            ALA F ++    G    +  +N L+D F +   Y  A   +  L        + PN+ T
Sbjct: 142 AALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQT 201

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN+++  LC  G  D  + ++  +++     D  TY + + GL K   ++ A  +  EM 
Sbjct: 202 YNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMP 261

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GCLNVVSYNILIRGLLENGKV 326
           + G+  DAV YNA++ G  + G  ++  ++WE + R      N+ +Y +++ GL + G+ 
Sbjct: 262 DYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 321

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            EA  +W  +   N   D+ T+G+LI+GLC++G ++ A ++ ++                
Sbjct: 322 KEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSD---------------- 365

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
             M K G  L+    NSL+ GF +  +   A   +      G    + +YN ++ GL
Sbjct: 366 --MVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIR-QITTYNVMMKGL 419



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 6/225 (2%)

Query: 404 LMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE- 461
           +++ F +A   + A+  F+++ S  GC+P + S+N L++   +  R+ EA +F   +   
Sbjct: 130 VLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHG 189

Query: 462 ---KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
              +   P++ TY++++  LC    +D A+ L     ++G  PD   Y+ L+ GL    +
Sbjct: 190 ACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQ 249

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYN 577
           +++AL L   M       + V YN L+ G FKTG  +KA+++W  ++ +    P++ +Y 
Sbjct: 250 LDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYK 309

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + L GLC   R  +A E  +  +     P T+T+ IL+  +  +G
Sbjct: 310 VMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSG 354


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 267/573 (46%), Gaps = 61/573 (10%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA     KR  E     L+   E G  PDV+SY  ++  L   G    A  +   M E 
Sbjct: 159 CEA-----KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213

Query: 165 GV--ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           G     +VV YN +IDGFFK+GD  +A ++++ +V +  + P++VTY+ +++ LCK    
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV-QRGIPPDLVTYSSVVHALCKARAM 272

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D+      +M       D++TY + I+G    G  + A RV++EM    I  D V  N +
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 283 IDGFCRAGKIKECFELWEVMG-------------------RKGCLN-------------- 309
           +   C+ GKIKE  ++++ M                     KGCL               
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 310 ---VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
              + ++N+LI+     G +D+A+ I+  +R+        T+  +I  LC+ G ++ A++
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             N++ + G                  G L  A  L++ +  +G +L+     S++N   
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++ +A  +F      G  P  V YN L++G C V +  +A      M+  G +P+++
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 572

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+NG C+  +ID  L L  + LQKG  P   +YNI+I GL  AG+   A   +  M
Sbjct: 573 GYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 632

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +     N  TY+ ++ GLFK    D+A+ ++  +    ++ DII+ N  + G+    R+
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 692

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +A +        G++P  +T+ I++  ++  G
Sbjct: 693 EEAKDLFASISRSGLVPCAVTYSIMITNLIKEG 725



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 245/518 (47%), Gaps = 23/518 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ D      ++ G  ++     AL +      E G   +V
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVME--TSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             YNIL+     +G   +A ++  R++ E  T   P+VV YN +I+G  K G  ++  ++
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     D  TY S +H LCKA  ++ AE   R+MV  G+  D  TYN +I G+  
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G+ KE   +++ M R+  L +VV+ N L+  L + GK+ EA  +++ +  K  N D  +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +++NG     Y  K             G L D   L + M   G      T N L+  
Sbjct: 364 YTIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +     L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y  LI G C    +  A +L  + +  G   D+  +  +I+ LC  G+V DA  ++ 
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
                   P+ V YN LMDG    G  +KAL +++ ++   + P+++ Y   + G C   
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           R+ +      + L +GI P+TI ++I++  +   G + 
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 278/609 (45%), Gaps = 65/609 (10%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
           +A  +++ + +    D+ALD+        GC   +         LC + +  +A   L  
Sbjct: 150 IASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209

Query: 126 LWEKGL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY---------- 173
           + E G    PDV +Y TVI+G  K GD+  A  +F EM +RG+  ++V Y          
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 269

Query: 174 -------------------------NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
                                    N LI G+   G +  A  +++ +  + S+ P+VV 
Sbjct: 270 RAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ-SILPDVVA 328

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
            N ++  LCK G+  E  +++D M    +  D F+Y   ++G    G +     ++  M+
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVD 327
             GI     T+N +I  +   G + +   ++  M   G   +VV+Y  +I  L   GK+D
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----------- 376
           +A+  +  + ++    D   +  LI G C +G L KA ++++E+   G            
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR+ DA ++ +     G   +A   N LM+G+    K+E A+ +F  M   G  
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P VV Y TL+NG CK+ R  E  S  +EML+KG KP  I Y+++I+GL ++ +   A   
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  + G   +   Y+I++ GL      ++A+ L+  ++  N   +++T NT++ G+F+
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
           T   ++A +++  I    L P  ++Y+I +  L     + +A +  +     G  P +  
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 748

Query: 611 WHILVRAVM 619
            + +VR ++
Sbjct: 749 LNHVVRELL 757



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 282/616 (45%), Gaps = 65/616 (10%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I A  LL      K    AL +    T E G       ++ +L+ L +         +L 
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 63  LIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           ++      C  DV    +VI  + K    +KA D+F+ M +         +      LC+
Sbjct: 209 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 268

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGD---------------------- 150
            R  +KA+ FL  +  KG+ PD ++Y  +I G   +G                       
Sbjct: 269 ARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVA 328

Query: 151 ---LLGALA----------VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
              L+G+L           VFD M  +G   +V  Y I+++G+  KG  +   ++++ L+
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD-LM 387

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   + P + T+NV+I     CG  D+ + +++ M+ +  +    TY + I  LC+ G +
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNIL 316
           + A   + +M++ G+  D   Y+ +I GFC  G + +  EL  E+M     L++V +  +
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I  L + G+V +A +I++L      + D+  + +L++G C  G + KA+++ +       
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA------ 561

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M   G + N     +L+NG+ +  +++  + LF+EM +KG  P+ + Y
Sbjct: 562 ------------MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +I+GL +  R   A     EM E G   +  TYS+++ GL +++  D A+ L  +   
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
                D+   N +I G+    +VE+A  L++++ +   VP  VTY+ ++  L K G  ++
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 729

Query: 557 ALEIWNHILEERLRPD 572
           A ++++ +      PD
Sbjct: 730 AEDMFSSMQNAGCEPD 745



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 238/562 (42%), Gaps = 77/562 (13%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIE--------------IQKCYCPEDVALS-VIQAYG 84
           LF  +++R I P LV + S +  L +              + K   P++   + +I  Y 
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 85  KNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
                 +A+ VF+ M                G LC+  + ++A+   +++  KG  PDV+
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++NG    G L+    +FD M   G+   +  +N+LI  +   G   +A  I+  +
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG------ 250
             +  V P+VVTY  +I  LC+ G+ D+ +E +++M       D + Y   I G      
Sbjct: 423 -RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 251 -----------------------------LCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                        LCK G V  A+ ++   V  G+  DAV YN 
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG+C  GK+++   +++ M   G   NVV Y  L+ G  + G++DE +S++  + +K 
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAAS 384
               +  + ++I+GL + G    A    +E+ E G                + R  D A 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 385 -LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L   +     K++  T N+++ G  Q  ++E A  LF  +SR G  P  V+Y+ +I  L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            K     EA      M   G +PD    + ++  L +  +I  A     +  ++ F+ + 
Sbjct: 722 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 781

Query: 504 TMYNILIHGLCSAGKVEDALQL 525
               +L+    S G   + ++ 
Sbjct: 782 LTAMLLVDLFSSKGTCREQIRF 803



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 182/387 (47%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S+TY   +    +A   E A   + +++ +G+ VDA+  + ++ GFC A +  E  + L 
Sbjct: 113 SYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SYNIL++ L   GK  +A  +  ++ E    C+ D   +  +I+G  
Sbjct: 173 HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T +S+++   +A  ++ 
Sbjct: 233 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYSSVVHALCKARAMDK 274

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  KG  P   +YN LI G     ++ EA    KEM  +   PD++  + L+ 
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  Y I+++G  + G + D   L+  M      P
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
            + T+N L+      G  DKA+ I+N + +  ++P +++Y   +  LC   +M DA E  
Sbjct: 395 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G++P    +H L++    +G+
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGS 481


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 238/471 (50%), Gaps = 20/471 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F EM       ++V ++       +   +    +  ++L +   +  N+ T N+MI
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-NGIAHNIYTLNIMI 120

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+C +      +  ++ K   E D+ T+ + I GL   G V  A  +   MVE+G  
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            D VTYN++++G CR+G      +L   M  +    +V +Y+ +I  L  +G +D AIS+
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  K   +   T+  L+ GLCK G  N                  D A L+  M   
Sbjct: 241 FKEMETKGIKSSVVTYNSLVRGLCKAGKWN------------------DGALLLKDMVSR 282

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N  T N L++ F++  KL+ A  L+KEM  +G SP +++YNTL++G C   R  EA
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + +  M+     PD++T++ LI G C  K++D  +K+     ++G   +   Y+IL+ G
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +GK++ A +L+  M     +P+++TY  L+DGL   G  +KALEI+  + + ++   
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I+ Y   ++G+C   ++ DA+       C+G+ P  +T+ +++  +   G+
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 513



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 249/494 (50%), Gaps = 20/494 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +    + + ++      L    ++   G+  N+   NI+I+ F +      A  +
Sbjct: 76  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + VM+    P+  T+N +I GL   G+  E + + DRM +N  + D  TY S ++G+C
Sbjct: 136 LGK-VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           ++G+   A  + R+M E  +  D  TY+ +ID  CR G I     L++ M  KG   +VV
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN L+RGL + GK ++   + + +  +    +  T  VL++   K              
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK-------------- 300

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+L +A  L   M   G   N  T N+LM+G+   ++L  A  +   M R  CSP
Sbjct: 301 ----EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V++ +LI G C V+R  +     + + ++G   + +TYS+L+ G CQS KI +A +L 
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G  PDV  Y IL+ GLC  GK+E AL+++ +++K      +V Y T+++G+ K 
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A  ++  +  + ++P++++Y + + GLC    +S+A   L      G  P   T+
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536

Query: 612 HILVRAVMNNGAST 625
           + L+RA + +G  T
Sbjct: 537 NTLIRAHLRDGDLT 550



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 234/462 (50%), Gaps = 19/462 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R +QF     F   L   G+  ++Y+   +IN   +      A +V  ++ + G E +
Sbjct: 88  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 147

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI G F +G    A  + +R+V E    P+VVTYN ++NG+C+ G     L++ 
Sbjct: 148 TTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYNSIVNGICRSGDTSLALDLL 206

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D FTY + I  LC+ G ++ A  +++EM   GI    VTYN+++ G C+A
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266

Query: 290 GKIKE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  +    L +++ R+   NV+++N+L+   ++ GK+ EA  +++ +  +  + +  T+
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++G C    L++A  +L+ +                       R+ D   +   + K
Sbjct: 327 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 386

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   NA T + L+ GF Q+ K++ A  LF+EM   G  P V++Y  L++GLC   +  +
Sbjct: 387 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    +++ +      ++ Y+ +I G+C+  K++ A  L C    KG  P+V  Y ++I 
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
           GLC  G + +A  L   M++    PN  TYNTL+    + GD
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 548



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 285/635 (44%), Gaps = 88/635 (13%)

Query: 33  GYAHSPHLFHHILRRL-IDPKL---VVHVSRILELIEIQKCYCPEDVAL--SVIQAYGKN 86
           GY      F+ +++ L ++ K+   VV V R++E        C  DV    S++    ++
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE------NGCQPDVVTYNSIVNGICRS 196

Query: 87  SMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
                ALD+ ++M E      +F     I  LCR    + A      +  KG+K  V +Y
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 256

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            +++ GL K+G       +  +M  R +  NV+ +N+L+D F K+G    A E+++ ++ 
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              + PN++TYN +++G C   R  E   M D M +N+   D  T+ S I G C    V+
Sbjct: 317 R-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
              +V+R + + G+  +AVTY+ ++ GFC++GKIK   EL++ M   G L +V++Y IL+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL +NGK+++A+ I+E L++   +     +  +I G+CK G                  
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG------------------ 477

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           ++ DA +L   +   G K N  T   +++G  +   L  A  L ++M   G +P   +YN
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 537

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLI    +      +   ++EM   G+  D  +  ++I+ L  + K  + L+ C   L K
Sbjct: 538 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK-RLTLRYC---LSK 593

Query: 498 G-------------------------------FTPDVTMYNILIHGLCSAGKVED--ALQ 524
           G                                T  + +  I   G+ SA    D   L+
Sbjct: 594 GSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLR 653

Query: 525 LYSNMKK-RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             S +KK +N    ++  N L+    +  +CD  +++        L  D + Y      +
Sbjct: 654 RSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDL-------ELPTDAVHYAHRAGRM 706

Query: 584 CSCSR---MSDAFEFLNDALCRGILPTTITWHILV 615
               R   +  A E   + + RGI P TIT+  L+
Sbjct: 707 RRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLI 741



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 204/493 (41%), Gaps = 75/493 (15%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVH---------------VSRILELIEIQK 68
           L D   +E     +  L+  ++ R I P ++ +                + +L+L+   K
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 69  CYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           C  P+ V   S+I+ Y      D  + VF+ +++         +       C+  + + A
Sbjct: 354 C-SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           +     +   G+ PDV +YG +++GL  +G L  AL +F+++ +  ++  +V Y  +I+G
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K G    A  ++  L  +  V PNV+TY VMI+GLCK G   E   +  +M+++    
Sbjct: 473 MCKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID-----------GFCR 288
           +  TY + I    + G++  + ++  EM   G   DA +   +ID            +C 
Sbjct: 532 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 591

Query: 289 AGKIKECFELWEVMG----RKGCLNVVSY---NILIRGLLENGKVDEAISIWELLRE--- 338
           +   K   +L E+ G    R   L  V     N +   L  N      ++  EL R+   
Sbjct: 592 SKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRK 651

Query: 339 --------KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
                   K  N D     ++ N L   G  +    ++ ++E   +      A    RM 
Sbjct: 652 LRRSSVLKKFKNRD--VRVLVTNELLTWGLEDAECDLMVDLELPTDA--VHYAHRAGRMR 707

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G K+   T   L                 KEM ++G +P  ++Y++LI+G CK  R  
Sbjct: 708 RPGRKMTVVTAEEL----------------HKEMIQRGIAPNTITYSSLIDGFCKENRLD 751

Query: 451 EAYSFVKEMLEKG 463
           EA   +  M+ KG
Sbjct: 752 EANQMLDLMVTKG 764



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
            V  AE +++EM++ GI  + +TY+++IDGFC+  ++ E  ++ ++M  KG  ++     
Sbjct: 714 TVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDI---RY 770

Query: 316 LIRGLLENGKVDEAISIWELL 336
           L+ GL+   +       WE L
Sbjct: 771 LLAGLMRKKRKGSETEGWENL 791


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 263/524 (50%), Gaps = 46/524 (8%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            LC+ ++ +KA      + + G+ PDVY+Y  +I+   K+G +  A + FDEM   G   
Sbjct: 461 FLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSP 520

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV Y  L+  + K     +A +I+ R+V + + YPN +TY+ +I+GLCK G   +  E+
Sbjct: 521 NVVTYTALLHAYLKSKQLYQANDIFHRMVGD-ACYPNAITYSALIDGLCKAGEIQKACEV 579

Query: 229 WDRM--KKNEREKDSF--------------TYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           + ++    +  E D +              TY + ++GLCKA  V  A  +   M+ +G 
Sbjct: 580 YAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGC 639

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             + + Y+A++DGFC+ G+I    E++  M + G L +V +Y  LI  + ++G++D A+ 
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           +   + + +CN +  T+  +++GLCK G   KA+ +L+                   M+K
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS------------------LMEK 741

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC  N  T  +L++G  +A K++  + LF +M  KGC+P  V+Y  LIN  C      +
Sbjct: 742 KGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDD 801

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+  + EM +  W   +  Y   + G   SK+   +L L  +       P   +Y +LI 
Sbjct: 802 AHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGMLID 859

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVT---YNTLMDGLFKTGDCDKALEIWNHILEER 568
               AG++E AL+L+  M + +   N+ +   + +L+  L  +   ++A+ +++ +    
Sbjct: 860 SFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRG 919

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           + PD+ ++   +KGL   ++ ++A +     LC GI    + W 
Sbjct: 920 IVPDLSAFVCLVKGLIERNKWNEALQ-----LCYGICQEGVNWE 958



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 241/481 (50%), Gaps = 10/481 (2%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +K+Q    KR +N +  +G  P    + ++++    + D   A  +F+ M   G     V
Sbjct: 318 KKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYV 377

Query: 172 CYNILIDGFFKKGDYMR------AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            YNI I     + +         A++++E +++ + V   + T N     LC  G+F++ 
Sbjct: 378 VYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTAN-FARCLCGVGKFEKA 436

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            ++   M +     D+ TY   I  LC+A  V+ A  +++EM + G+  D  TY  +ID 
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+AG I++    ++ M   GC  NVV+Y  L+   L++ ++ +A  I+  +    C  +
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
           + T+  LI+GLCK G + KA ++  ++   G     ++       D      N  T  +L
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLI--GTSDNIESDFYFEGKDTDTISPNVVTYGAL 614

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG  +A K+ +A  L   M   GC P  + Y+ L++G CKV     A      M + G+
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY 674

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P + TY+ LI+ + +  ++D+A+K+  Q L+    P+V  Y  ++ GLC  G+ E AL 
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALN 734

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L S M+K+ C PN+VTY  L+DGL K G  D  LE++  +  +   P+ ++Y I +   C
Sbjct: 735 LLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCC 794

Query: 585 S 585
           +
Sbjct: 795 A 795



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 281/619 (45%), Gaps = 57/619 (9%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMP 89
           ++ GY  S   ++ +++ L     V    R+ + +             S  QA  K    
Sbjct: 196 KDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRW 255

Query: 90  DKALDVFQRMNEIFGCEAGILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
             ALD+ +R  E F  +  +LC +          F +A  FL+ +      P+V +Y T+
Sbjct: 256 GDALDLLER--EDFKLDT-VLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTL 312

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           + G +K   L     + + M   G   +   +N L+  +    DY  A +++ R+     
Sbjct: 313 LTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM-NTCG 371

Query: 202 VYPNVVTYNVMINGLCKCGR--------FDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
             P  V YN+ I  +C  GR         D   ++++ M       +     +F   LC 
Sbjct: 372 CPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCG 429

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            G  E A ++ +EM+  G   DA TY  +I   C+A ++ + F L++ M + G   +V +
Sbjct: 430 VGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYT 489

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ILI    + G +++A S ++ +R   C+ +  T+  L++   K+  L +A  I +   
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH--- 546

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI-------------- 418
                          RM    C  NA T ++L++G  +A +++ A               
Sbjct: 547 ---------------RMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE 591

Query: 419 --FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
             F F+       SP VV+Y  L+NGLCK ++  +A+  +  ML  G +P+ I Y  L++
Sbjct: 592 SDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+  +ID A ++  +  + G+ P V  Y  LI  +   G+++ A+++ S M K +C P
Sbjct: 652 GFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTY  ++DGL KTG+ +KAL + + + ++   P++++Y   + GL    ++    E  
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771

Query: 597 NDALCRGILPTTITWHILV 615
                +G  P  +T+ IL+
Sbjct: 772 MQMKTKGCAPNYVTYRILI 790



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 170/639 (26%), Positives = 297/639 (46%), Gaps = 54/639 (8%)

Query: 6   KRLLNLLKAEK-NPHTAL--ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           KR++N++  E  NP  +L  +L  +      YA++  LF+ +      P  VV+   I  
Sbjct: 326 KRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGS 385

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
           +   ++   PE + L+  + Y +  +    L+     N      A  LC   +FEKA + 
Sbjct: 386 ICGREELPNPELLDLAE-KVYEEMLVASCVLNKINTANF-----ARCLCGVGKFEKAFQI 439

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  +  KG  PD  +Y  VI  L ++  +  A  +F EM + GV  +V  Y ILID F K
Sbjct: 440 VKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCK 499

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G   +A+  W   +      PNVVTY  +++   K  +  +  +++ RM  +    ++ 
Sbjct: 500 AGLIEQAQS-WFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMV------ESGIFVDA----------VTYNAMIDGF 286
           TY + I GLCKAG ++ A  VY +++      ES  + +           VTY A+++G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+A K+ +  +L + M   GC  N + Y+ L+ G  + G++D A  ++  LR   C    
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF--LRMTKCGYLP 676

Query: 346 TTHGV--LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           + H    LI+ + K+G L+ A+++L++                  M K  C  N  T  +
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQ------------------MLKDSCNPNVVTYTA 718

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++G  +  + E A+ L   M +KGCSP VV+Y  LI+GL K  +         +M  KG
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P+ +TY +LIN  C +  +D A  L  +  Q  +   +  Y   + G   + +   +L
Sbjct: 779 CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASL 836

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI---TL 580
            L   M+  +  P    Y  L+D   K G  + ALE+   ++E     ++ S ++    +
Sbjct: 837 GLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLI 896

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           + LC  S++ +A    ++   RGI+P    +  LV+ ++
Sbjct: 897 QALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLI 935



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 216/487 (44%), Gaps = 79/487 (16%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           DKA  +FQ M ++ G    +          C+    E+A+ + + +   G  P+V +Y  
Sbjct: 469 DKAFLLFQEMKKV-GVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV--- 197
           +++  +KS  L  A  +F  M       N + Y+ LIDG  K G+  +A E++ +L+   
Sbjct: 528 LLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTS 587

Query: 198 --METSVY----------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +E+  Y          PNVVTY  ++NGLCK  +  +  ++ D M     E +   Y 
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYD 647

Query: 246 SFIHGLCKAGNVEGAERVYREMVESG--------------IFVDA--------------- 276
           + + G CK G ++ A+ V+  M + G              +F D                
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 707

Query: 277 ------VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
                 VTY AM+DG C+ G+ ++   L  +M +KGC  NVV+Y  LI GL + GKVD  
Sbjct: 708 SCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAG 767

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNG---------------YLNKAIQILNEVEEG 374
           + ++  ++ K C  +  T+ +LIN  C  G               +  K +Q      +G
Sbjct: 768 LELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQG 827

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
              R   +  L+  M+ H     A     L++ F +A +LE A+ L KEM     S  + 
Sbjct: 828 FSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMA 887

Query: 435 S---YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           S   + +LI  LC   +  EA +   EM  +G  PD+  +  L+ GL +  K + AL+LC
Sbjct: 888 SKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLC 947

Query: 492 CQFLQKG 498
               Q+G
Sbjct: 948 YGICQEG 954



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 156/657 (23%), Positives = 265/657 (40%), Gaps = 71/657 (10%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           ++ +L A ++P   +  F  A R+ GY H+   +                     L E+ 
Sbjct: 104 VVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYD-------------------ALAEVL 144

Query: 68  KCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLW 127
               P   A  +++  G++       DV  R+  +        C +  + +A   L  L 
Sbjct: 145 GFEDPARTAERLLREIGEDDR-----DVLGRLLNVL---VRRCCLQGLWGEALEELGRLK 196

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + G +P   +Y  ++  L  +G +  A  V  EM   G   +            K+G + 
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG 256

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A ++ ER   +     + V    MI+GL +   F+E +    RM+ N    +  TY + 
Sbjct: 257 DALDLLEREDFKL----DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTL 312

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G  K   +   +R+   M+  G       +N+++  +C A      ++L+  M   GC
Sbjct: 313 LTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGC 372

Query: 308 L-NVVSYNILI-----RGLLENGKV-DEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
               V YNI I     R  L N ++ D A  ++E +   +C  +          LC  G 
Sbjct: 373 PPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGK 432

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
             KA QI+ E+   G                   R+  A  L   M K G   + YT   
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++ F +A  +E A   F EM   GCSP VV+Y  L++   K ++  +A      M+   
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG----------------FTPDVTMYN 507
             P+ ITYS LI+GLC++ +I  A ++  + +                    +P+V  Y 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            L++GLC A KV DA  L   M    C PN + Y+ L+DG  K G+ D A E++  + + 
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              P + +Y   +  +    R+  A + L+  L     P  +T+  +V  +   G +
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 211/513 (41%), Gaps = 36/513 (7%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA+RFL   + + L   V      + G V+S +L     ++ E  + G +    CY+ L 
Sbjct: 87  KAERFLRR-YREFLTDSVV---VAVLGAVRSPELCVRFFLWAER-QVGYKHTGACYDALA 141

Query: 178 D--GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +  GF    D  R  E   R + E          NV++   C  G + E LE   R+K  
Sbjct: 142 EVLGF---EDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDF 198

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                + TY + +  L  AG VE A RV +EM  SG  +D  T  +     C+ G+  + 
Sbjct: 199 GYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA 258

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            +L E    K  L+ V    +I GL+E    +EA+S    +R  +   +  T+  L+ G 
Sbjct: 259 LDLLEREDFK--LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            K   L    +I                  +N M   GC  +    NSL++ +  A    
Sbjct: 317 LKKKQLGWCKRI------------------INMMMTEGCNPSPSLFNSLVHTYCNAEDYA 358

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE------AYSFVKEMLEKGWKPDMI 469
            A  LF  M+  GC P  V YN  I  +C  E          A    +EML      + I
Sbjct: 359 YAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKI 418

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             +     LC   K + A ++  + ++KGF PD + Y  +I  LC A +V+ A  L+  M
Sbjct: 419 NTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEM 478

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           KK    P++ TY  L+D   K G  ++A   ++ +      P++++Y   L       ++
Sbjct: 479 KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQL 538

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             A +  +  +     P  IT+  L+  +   G
Sbjct: 539 YQANDIFHRMVGDACYPNAITYSALIDGLCKAG 571


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 236/452 (52%), Gaps = 25/452 (5%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF---TYCSFIHGLC 252
           + +E+    N V +   + GLCK G+ ++  E    M+++          T  S I  LC
Sbjct: 1   MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK---GCLN 309
           KAG V+ A  +   M++ G   D  T++ +I+  C+A KI+E  E  + M R       +
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 310 VVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             SYN L+  L +  KV +A +I+  ++ E++   D  ++ +LI+G CK   L +A ++ 
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            ++ +                   +GR+ADA  +   M   GC  +  T ++L++GF  A
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K + A  LF+ M  +GC P  V+YN L++GLCK  +  EA+   ++M+E+G  PD +TY
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L+ G C   KI+ A+++  + + KG  PDV  YN L+ G   AGK  +A QL+  M  
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCSRMS 590
           R C P+ V++N ++DGL K    D A+E++  + ++    PD+++YN  + GLC   R+S
Sbjct: 361 RECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +A +   +     + P    +++L+ A+   G
Sbjct: 421 EAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 215/413 (52%), Gaps = 24/413 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A   L ++ ++G  PD+ ++  +IN L K+ D +     F +   R + T 
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA-DKIQEAQEFLQGMNRTISTR 117

Query: 170 V---VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
                 YN L++   K     +A  I+  +V E SV P+VV+Y+++I+G CK        
Sbjct: 118 ASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAE 177

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++ +M       +  TY +F++GL + G +  A+ VY EM+ +G   D +TY+ +I GF
Sbjct: 178 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
             A K  +  EL+E M  +GC  N V+YN L+ GL +  K DEA  ++  + E+ C+ D 
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDK 297

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  L+ G C  G + +A+++ +E+   G                H   + AY C  L+
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKG----------------HDPDVVAYNC--LL 339

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM-LEKGW 464
            GF +A K   A  LF+ M  + C P  VS+N +I+GL K +R  +A    + M  + G 
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 399

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            PD++TY+ LI GLC  +++  A+K+  +  +   +PD   +N+L+  + +AG
Sbjct: 400 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 238/484 (49%), Gaps = 62/484 (12%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT---VINGLVKSGDLLGALAVFDEMFER 164
           G LC+  + E+A     ++ E        S GT   VI  L K+G +  AL++ + M +R
Sbjct: 19  GGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 78

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G                                      P++ T++++IN LCK  +  E
Sbjct: 79  GY------------------------------------CPDMATHSMLINELCKADKIQE 102

Query: 225 CLEMWDRMKK--NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFVDAVTYNA 281
             E    M +  + R    F+Y S ++ LCKA  V  A  ++  MV E  +  D V+Y+ 
Sbjct: 103 AQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSI 162

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +IDGFC+  ++    +L++ M    C+ NV +YN  + GL+  G++ +A  ++E +    
Sbjct: 163 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C+ D  T+  LI+G       ++A ++                ++++R    GC+ NA T
Sbjct: 223 CSPDVITYSTLIHGFSLARKHDQAHELFE--------------AMISR----GCRPNAVT 264

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L++G  + SK + A  LF++M  +GC P  V+Y TL+ G C V +  +A     EM+
Sbjct: 265 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMV 324

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG  PD++ Y+ L+ G  ++ K   A +L    + +   PD   +NI+I GL  A +++
Sbjct: 325 SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLD 384

Query: 521 DALQLYSNMKK-RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           DA++++  M++   C P+LVTYN+L+ GL       +A++++  I   +L PD  ++N+ 
Sbjct: 385 DAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 444

Query: 580 LKGL 583
           L+ +
Sbjct: 445 LEAM 448



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 198/413 (47%), Gaps = 65/413 (15%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCE--------AGILCRKRQFEKAKRFLNSLWE- 128
           SVIQ   K    D AL + + M +   C            LC+  + ++A+ FL  +   
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 129 -KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDY 186
                   +SY +++N L K+  +  A A+F  M  ER V  +VV Y+ILIDGF K  + 
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF------------------------ 222
            RA++++++++ + +  PNV TYN  +NGL + GR                         
Sbjct: 174 GRAEKLYKQMI-DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 223 -----------DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
                      D+  E+++ M       ++ TY   +HGLCK    + A  ++R+MVE G
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
              D VTY  ++ GFC  GKI++  E+++ M  KG   +VV+YN L++G    GK  EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            +++++  + C  D+ +H ++I+GL K   L+ A+++   +E+                 
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ----------------- 395

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            HGC  +  T NSL+ G     +L  A+ +FKE+ R   SP   ++N L+  +
Sbjct: 396 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDV 135
           K S PD+A ++F++M E  GC+   +         C   + E+A    + +  KG  PDV
Sbjct: 274 KESKPDEAHELFRKMVE-RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 332

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y  ++ G  ++G    A  +F  M  R  + + V +NI+IDG  K      A E++ER
Sbjct: 333 VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +    P++VTYN +I GLC   R  E ++++  + + +   D   +   +  +  AG
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452

Query: 256 N 256
           +
Sbjct: 453 H 453


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 253/527 (48%), Gaps = 25/527 (4%)

Query: 119 AKRFLNS---LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           A++FL S   +  KG  P V +   V+  L  S  +  A AV++ M E G+   V+ +N 
Sbjct: 221 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 280

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           ++D  FK GD  R  +IW  +      +  V TYN++ING  K G+ +E       M+++
Sbjct: 281 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRS 339

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                 +++   I G CK G  + A  V  EM+ +GI+    TYN  I   C  G+I + 
Sbjct: 340 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 399

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            EL   M      +VVSYN L+ G ++ GK  EA  +++ LR  + +    T+  LI+GL
Sbjct: 400 RELLSSMA---APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 456

Query: 356 CKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNA 398
           C++G L  A ++  E+                      G L+ A  + + M + G K + 
Sbjct: 457 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 516

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           Y   +   G ++    + A  L +EM +    +P +  YN  I+GLCKV    +A  F +
Sbjct: 517 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 576

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           ++   G  PD +TY+ +I G  ++ +  MA  L  + L+K   P V  Y +LI+G   AG
Sbjct: 577 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 636

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++E A Q  + MKKR   PN++T+N L+ G+ K G+ D+A      + EE + P+  SY 
Sbjct: 637 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 696

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + +   C   +  +  +   + L + I P   T   L + +  +  S
Sbjct: 697 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 743



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 25/438 (5%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+A+RF   +   G     YS+  +I G  K G    A  V DEM   G+      YN
Sbjct: 325 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 384

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I I      G    A+E+     + +   P+VV+YN +++G  K G+F E   ++D ++ 
Sbjct: 385 IYICALCDFGRIDDAREL-----LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 439

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +      TY + I GLC++GN+EGA+R+  EM    IF D +TY  ++ GF + G +  
Sbjct: 440 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 499

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA-DSTTHGVLI 352
             E+++ M RKG   +  +Y     G L  G  D+A  + E +   + +A D T + V I
Sbjct: 500 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 559

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLCK G L KAI+   ++                   + G   +  T  +++ G+++  
Sbjct: 560 DGLCKVGNLVKAIEFQRKIF------------------RVGLVPDHVTYTTVIRGYLENG 601

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           + + A  L+ EM RK   P+V++Y  LI G  K  R  +A+ +  EM ++G +P+++T++
Sbjct: 602 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 661

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L+ G+C++  ID A +  C+  ++G  P+   Y +LI   C   K E+ ++LY  M  +
Sbjct: 662 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 721

Query: 533 NCVPNLVTYNTLMDGLFK 550
              P+  T+  L   L K
Sbjct: 722 EIEPDGYTHRALFKHLEK 739



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 257/532 (48%), Gaps = 40/532 (7%)

Query: 83  YGKNSMPDKALDVFQRM------NEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPD 134
           Y K SM +K L  F++M        +  C     +L   R   KA     ++ E G+ P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V ++ T+++   K+GDL     ++ EM  R +E + V YNILI+GF K G    A+    
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 195 RLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            +     +V P   ++N +I G CK G FD+   + D M        + TY  +I  LC 
Sbjct: 335 DMRRSGFAVTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 392

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VV 311
            G ++ A    RE++ S    D V+YN ++ G+ + GK  E   L++ + R G ++  +V
Sbjct: 393 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIV 447

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN LI GL E+G ++ A  + E +  +    D  T+  L+ G  KNG L+ A ++ +E+
Sbjct: 448 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 507

Query: 372 ------EEG--------GEGRLAD---AASLVNRM---DKHGCKLNAYTCNSLMNGFIQA 411
                  +G        GE RL D   A  L   M   D H   L  Y  N  ++G  + 
Sbjct: 508 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY--NVRIDGLCKV 565

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L  AI   +++ R G  P  V+Y T+I G  +  +F  A +   EML K   P +ITY
Sbjct: 566 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 625

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +LI G  ++ +++ A +   +  ++G  P+V  +N L++G+C AG +++A +    M++
Sbjct: 626 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 685

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
               PN  +Y  L+         ++ ++++  +L++ + PD  ++    K L
Sbjct: 686 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 737


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 238/471 (50%), Gaps = 20/471 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F EM       ++V ++       +   +    +  ++L +   +  N+ T N+MI
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMI 130

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C+C +      +  ++ K   E D+ T+ + I GL   G V  A  +   MVE+G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            D VTYN++++G CR+G      +L   M  +    +V +Y+ +I  L  +G +D AIS+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  K   +   T+  L+ GLCK G  N                  D A L+  M   
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWN------------------DGALLLKDMVSR 292

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N  T N L++ F++  KL+ A  L+KEM  +G SP +++YNTL++G C   R  EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            + +  M+     PD++T++ LI G C  K++D  +K+     ++G   +   Y+IL+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +GK++ A +L+  M     +P+++TY  L+DGL   G  +KALEI+  + + ++   
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I+ Y   ++G+C   ++ DA+       C+G+ P  +T+ +++  +   G+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 249/494 (50%), Gaps = 20/494 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +    + + ++      L    ++   G+  N+   NI+I+ F +      A  +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + VM+    P+  T+N +I GL   G+  E + + DRM +N  + D  TY S ++G+C
Sbjct: 146 LGK-VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           ++G+   A  + R+M E  +  D  TY+ +ID  CR G I     L++ M  KG   +VV
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN L+RGL + GK ++   + + +  +    +  T  VL++   K              
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK-------------- 310

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG+L +A  L   M   G   N  T N+LM+G+   ++L  A  +   M R  CSP
Sbjct: 311 ----EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +V++ +LI G C V+R  +     + + ++G   + +TYS+L+ G CQS KI +A +L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G  PDV  Y IL+ GLC  GK+E AL+++ +++K      +V Y T+++G+ K 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A  ++  +  + ++P++++Y + + GLC    +S+A   L      G  P   T+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 612 HILVRAVMNNGAST 625
           + L+RA + +G  T
Sbjct: 547 NTLIRAHLRDGDLT 560



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 234/462 (50%), Gaps = 19/462 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R +QF     F   L   G+  ++Y+   +IN   +      A +V  ++ + G E +
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +N LI G F +G    A  + +R+V E    P+VVTYN ++NG+C+ G     L++ 
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M++   + D FTY + I  LC+ G ++ A  +++EM   GI    VTYN+++ G C+A
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 290 GKIKE-CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  +    L +++ R+   NV+++N+L+   ++ GK+ EA  +++ +  +  + +  T+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++G C    L++A  +L+ +                       R+ D   +   + K
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   NA T + L+ GF Q+ K++ A  LF+EM   G  P V++Y  L++GLC   +  +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A    +++ +      ++ Y+ +I G+C+  K++ A  L C    KG  P+V  Y ++I 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
           GLC  G + +A  L   M++    PN  TYNTL+    + GD
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 142/289 (49%), Gaps = 37/289 (12%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING------LVKSGDLL---- 152
           F     +  ++ + ++A      +  +G+ P++ +Y T+++G      L ++ ++L    
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 153 -------------------------GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
                                      + VF  + +RG+  N V Y+IL+ GF + G   
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A+E+++ +V    V P+V+TY ++++GLC  G+ ++ LE+++ ++K++ +     Y + 
Sbjct: 421 LAEELFQEMVSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
           I G+CK G VE A  ++  +   G+  + +TY  MI G C+ G + E   L   M   G 
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
             N  +YN LIR  L +G +  +  + E ++    +AD+++  ++I+ L
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/472 (31%), Positives = 240/472 (50%), Gaps = 24/472 (5%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L     F++ +       EKG    V++  ++I      G +   L V+  M E G+E 
Sbjct: 164 VLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEP 223

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLE 227
           ++  +N L++G         A+ ++E  VME   + P+VV+YN MI G CK G   + +E
Sbjct: 224 SLYTFNFLLNGLVNSMFIESAERVFE--VMECGKIGPDVVSYNTMIKGYCKAGNTKKAME 281

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            +  M+K   E D  TY + I      GN +    +Y+EM E G+ +    Y+ +I G C
Sbjct: 282 KFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLC 341

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G+  E   ++E M +KGC  NV  Y  LI    +NG V+EAI+++E ++ +    D  
Sbjct: 342 KDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDV 401

Query: 347 THGVLINGLCKNGYLNKAIQIL-----NEVEE------------GGEGRLADAASLVNRM 389
           T+GV++NGLCK+G L++A++       NEV              G  GR+ +A      M
Sbjct: 402 TYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEM 461

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            + GC  ++Y  N+L++   ++ K+E A+ LFK M ++GC  TV +Y  LI+GL K  R 
Sbjct: 462 VERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRN 521

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA      M++KG  P   ++  L  GLC S K+  A K+  +    G  P+ T +  +
Sbjct: 522 EEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDM 580

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNC-VPNLVTYNTLMDGLFKTGDCDKALEI 560
           I+ LC AG+ E A +L   +  R   VP  V    L++ L K G+ D A+++
Sbjct: 581 INVLCKAGRTEQACKLADGIVDRGREVPGRVR-TILINALRKAGNADLAMKL 631



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 218/440 (49%), Gaps = 20/440 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           + CY  LID      D+ R + I+     E      V   N +I      G  +E L +W
Sbjct: 155 IECYVSLIDVLSLSSDFDRVRCIFGEF-KEKGFLMTVFAANSLIRSFGALGMVEELLWVW 213

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RMK++  E   +T+   ++GL  +  +E AERV+  M    I  D V+YN MI G+C+A
Sbjct: 214 RRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKA 273

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G  K+  E +  M ++    + ++Y  LI+     G  D  + +++ + E+        +
Sbjct: 274 GNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAY 333

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I GLCK+G                  R  + +S+   M+K GCK N     +L++ +
Sbjct: 334 SLVIGGLCKDG------------------RTVEGSSVFENMNKKGCKANVAIYTALIDAY 375

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  AI LF+ M  +G  P  V+Y  ++NGLCK  R  EA  + +   +     + 
Sbjct: 376 GKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNA 435

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + YS LI+GL ++ ++D A K   + +++G   D   YN LI  L  +GK+E+AL L+  
Sbjct: 436 MFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKR 495

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+K  C   + TY  L+ GLFK    ++AL++W+ ++++ + P   S+     GLC   +
Sbjct: 496 MEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGK 555

Query: 589 MSDAFEFLNDALCRGILPTT 608
           ++ A + L++    G++P T
Sbjct: 556 VARACKILDELAPMGVIPET 575



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 192/361 (53%), Gaps = 22/361 (6%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSM 88
           +E G   S + F+ +L  L++   +    R+ E++E  K   P+ V+  ++I+ Y K   
Sbjct: 217 KESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKI-GPDVVSYNTMIKGYCKAGN 275

Query: 89  PDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
             KA++ F  M +             I  C +     +  F+        + E+GL+   
Sbjct: 276 TKKAMEKFTDMEKRNLEPDKITYLTLIQACYS-----EGNFDSCLHLYQEMEERGLEIPP 330

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           ++Y  VI GL K G  +   +VF+ M ++G + NV  Y  LID + K G+   A  ++ER
Sbjct: 331 HAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFER 390

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  E    P+ VTY V++NGLCK GR DE +E ++  K NE   ++  Y S I GL KAG
Sbjct: 391 MKGE-GFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAG 449

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            V+ AE+ + EMVE G   D+  YNA+ID   ++GK++E   L++ M ++GC   V +Y 
Sbjct: 450 RVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYT 509

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ILI GL +  + +EA+ +W+L+ +K     + +   L  GLC +G + +A +IL+E+   
Sbjct: 510 ILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPM 569

Query: 375 G 375
           G
Sbjct: 570 G 570



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 21/408 (5%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  +I+ L     FD    ++   K+       F   S I      G VE    V+R M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKV 326
           ESGI     T+N +++G   +  I+    ++EVM  G+ G  +VVSYN +I+G  + G  
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGP-DVVSYNTMIKGYCKAGNT 276

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A+  +  + ++N   D  T+  LI      G  +  + +  E+EE G      A SLV
Sbjct: 277 KKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLV 336

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                             + G  +  +      +F+ M++KGC   V  Y  LI+   K 
Sbjct: 337 ------------------IGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKN 378

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
               EA +  + M  +G++PD +TY +++NGLC+S ++D A++            +   Y
Sbjct: 379 GNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFY 438

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           + LI GL  AG+V++A + +  M +R C  +   YN L+D L K+G  ++AL ++  + +
Sbjct: 439 SSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEK 498

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           E     + +Y I + GL    R  +A +  +  + +GI PTT ++  L
Sbjct: 499 EGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRAL 546



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 170/367 (46%), Gaps = 29/367 (7%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           I+   L+    +E N  + L L+     E G    PH +  ++  L      V  S + E
Sbjct: 296 ITYLTLIQACYSEGNFDSCLHLYQE-MEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFE 354

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
            +  + C     +  ++I AYGKN   ++A+++F+RM                       
Sbjct: 355 NMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKG--------------------- 393

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
                 +G +PD  +YG ++NGL KSG L  A+  F+   +  V  N + Y+ LIDG  K
Sbjct: 394 ------EGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGK 447

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A++ +E +V E     +   YN +I+ L K G+ +E L ++ RM+K   ++  +
Sbjct: 448 AGRVDEAEKFFEEMV-ERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVY 506

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I GL K    E A +++  M++ GI     ++ A+  G C +GK+    ++ + +
Sbjct: 507 TYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDEL 566

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
              G +   ++  +I  L + G+ ++A  + + + ++          +LIN L K G  +
Sbjct: 567 APMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNAD 626

Query: 363 KAIQILN 369
            A+++++
Sbjct: 627 LAMKLMH 633



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 18/315 (5%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           + V + N LIR     G V+E + +W  ++E        T   L+NGL  + ++  A ++
Sbjct: 188 MTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERV 247

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
              +E G                K G  + +Y  N+++ G+ +A   + A+  F +M ++
Sbjct: 248 FEVMECG----------------KIGPDVVSY--NTMIKGYCKAGNTKKAMEKFTDMEKR 289

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P  ++Y TLI        F       +EM E+G +     YSL+I GLC+  +    
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +     +KG   +V +Y  LI      G V +A+ L+  MK     P+ VTY  +++G
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNG 409

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L K+G  D+A+E +    +  +  + + Y+  + GL    R+ +A +F  + + RG    
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469

Query: 608 TITWHILVRAVMNNG 622
           +  ++ L+ A+  +G
Sbjct: 470 SYCYNALIDALAKSG 484



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 6/223 (2%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL++    +S  +    +F E   KG   TV + N+LI     +    E     + M E 
Sbjct: 160 SLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKES 219

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G +P + T++ L+NGL  S  I+ A ++          PDV  YN +I G C AG  + A
Sbjct: 220 GIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKA 279

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           ++ +++M+KRN  P+ +TY TL+   +  G+ D  L ++  + E  L     +Y++ + G
Sbjct: 280 MEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGG 339

Query: 583 LCSCSRM---SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           LC   R    S  FE +N   C+        +  L+ A   NG
Sbjct: 340 LCKDGRTVEGSSVFENMNKKGCKA---NVAIYTALIDAYGKNG 379



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%)

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y  LI+ L  S   D    +  +F +KGF   V   N LI    + G VE+ L ++  MK
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           +    P+L T+N L++GL  +   + A  ++  +   ++ PD++SYN  +KG C      
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            A E   D   R + P  IT+  L++A  + G
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEG 309


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 262/519 (50%), Gaps = 44/519 (8%)

Query: 110 LCRKRQFEKAKRFLNSL--WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           L   +++ K + FL+    +EK      YS   + + +  SGD                 
Sbjct: 42  LAHTKKYSKIRSFLDKFVKYEKD-----YSVSAIFHAISMSGDSFC-------------- 82

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N +  ++L+  F +    +R  E ++R   +     ++++ N +++GL K     +   
Sbjct: 83  VNSILADMLVLAFVRNLKILRGFEAFKR-AGDYGFKLSLISCNPLLSGLVKESENGDMEF 141

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++  M K + E +  ++   ++GLCK G +  A  V  +M   G+  + +TYN +IDG+C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 288 RAGKIKECFE----LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           + G+I + ++    L E++ +  C N V+YNILI G  ++  V  A+ ++  ++ +    
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+ +LINGLC                   +G++ +A +L ++M     + N  T N 
Sbjct: 262 NVVTYNILINGLC------------------SDGKVDEAVALRDQMVSSDLEPNVVTHNV 303

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+NGF +   +  AI LF +M ++G  P  ++Y TLI+  CK  R  +A++    M+++G
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P++ TY+ LI GLC+   +  A  L  + + K  + DV  YNILI  LC  G+   A+
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +L   M ++   P+ VTYNTLMDG  + G+   AL +   +  +  + +++++N+ +KG 
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C   R+ DA   LN+ L RG++P   T+ I+   +M  G
Sbjct: 484 CLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 261/541 (48%), Gaps = 43/541 (7%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE-LIEI 66
           L  LL +  +P   L  F  + +E   +HS  L   IL  L   K    +   L+  ++ 
Sbjct: 2   LQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKY 61

Query: 67  QKCYCPEDV--ALSVI-QAYGKNS-MPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
           +K Y    +  A+S+   ++  NS + D  +  F R  +I           R FE  KR 
Sbjct: 62  EKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKIL----------RGFEAFKR- 110

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
                + G K  + S   +++GLVK  +      V+ EM +R +E NV+ +NI+++G  K
Sbjct: 111 ---AGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK--- 239
            G   RA ++ E + +   V PNV+TYN +I+G CK GR  +  +  D + K    K   
Sbjct: 168 VGKLNRAGDVIEDMKV-WGVSPNVITYNTLIDGYCKMGRIGKMYK-ADAILKEMVAKGIC 225

Query: 240 -DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +  TY   I G CK  NV GA RV+ EM   G+  + VTYN +I+G C  GK+ E   L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M       NVV++N+LI G  +N  V+EAI+++  + ++  + ++ T+  LI+  CK
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
           +G +  A  + N + + G                 +G +  A SL+N M       +  T
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L++   +  +   A+ L  EM  KG +P+ V+YNTL++G C+      A      M 
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG + +++T+++LI G C   +++ A  L  + L++G  P+ T Y I+   +   G V 
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVP 525

Query: 521 D 521
           D
Sbjct: 526 D 526



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 196/380 (51%), Gaps = 38/380 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG---DLLGALAVFDEMFERGV 166
           LC+  +  +A   +  +   G+ P+V +Y T+I+G  K G    +  A A+  EM  +G+
Sbjct: 165 LCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N V YNILIDGF K  +   A  ++  +     + PNVVTYN++INGLC  G+ DE +
Sbjct: 225 CPNEVTYNILIDGFCKDENVSGAMRVFGEM-QRQGLRPNVVTYNILINGLCSDGKVDEAV 283

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            + D+M  ++ E +  T+   I+G CK   V  A  ++ +M + G+  +A+TY  +ID +
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343

Query: 287 CRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G++++ F L+ +M  +G    VS YN LI GL   G V  A S+   +  K  +AD 
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+ +LI+ LCK G   KA+++L+E+ E G                 EG L  A  +  R
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M++ G + N  T N L+ GF    +LE+A  L  EM  +G  P   +Y  +         
Sbjct: 464 MERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII--------- 514

Query: 449 FGEAYSFVKEMLEKGWKPDM 468
                   +EM+EKG+ PD+
Sbjct: 515 -------KEEMMEKGFVPDI 527



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 207/417 (49%), Gaps = 39/417 (9%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N L    ++ +     D+  K E++   ++  +  H +  +G+               
Sbjct: 38  ILNSLAHTKKYSKIRSFLDKFVKYEKD---YSVSAIFHAISMSGD--------------S 80

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
             V+++  + ++  F R  KI   FE ++  G  G  L+++S N L+ GL++  +  +  
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            ++  + ++    +  +  +++NGLCK G LN+A                    ++  M 
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA------------------GDVIEDMK 182

Query: 391 KHGCKLNAYTCNSLMNGFIQAS---KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
             G   N  T N+L++G+ +     K+  A  + KEM  KG  P  V+YN LI+G CK E
Sbjct: 183 VWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDE 242

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
               A     EM  +G +P+++TY++LINGLC   K+D A+ L  Q +     P+V  +N
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           +LI+G C    V +A+ L+++M+K+   PN +TY TL+D   K G  + A  ++N +++ 
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + P++ +YN  + GLC    +  A   +N+ + + +    +T++IL+ ++   G S
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 245/487 (50%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++   K      A+++   +  +G++ +++  NILI+ F   G       +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+ VT N +I GLC  G+  + L   D++     + +  +Y + I+G+C
Sbjct: 117 LAK-ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G+  GA ++ R++       +   Y+ +ID  C+   + E + L+  M  KG   +VV
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y+ LI G    GK+ EAI +   +  K  N +  T+ +L++ LCK              
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK-------------- 281

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A S++  M K   K +  T ++LM+G+    +++ A  +F  MS  G +P
Sbjct: 282 ----EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V +Y  LING CK +   EA +  KEM +K   P ++TYS LI+GLC+S +I     L 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   DV  Y+ LI GLC  G ++ A+ L++ MK +   PN+ T+  L+DGL K 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A E++  +L +    ++ +YN+ + G C    + +A   L+     G +P   T+
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 612 HILVRAV 618
             ++ A+
Sbjct: 518 ETIIIAL 524



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 254/517 (49%), Gaps = 34/517 (6%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           +K LD F +M              + +  A    + L  KG++PD+ +   +IN     G
Sbjct: 63  NKILDSFAKM--------------KHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
            +    +V  ++ +RG   + V  N LI G   KG   +A    ++L+ +     N V+Y
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ-GFQLNQVSY 167

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             +ING+CK G     +++  ++     + +   Y + I  LCK   V  A  ++ EM  
Sbjct: 168 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            GI  D VTY+ +I GFC  GK+KE   L   M  K    NV +YNIL+  L + GKV E
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A S+  ++ +     D  T+  L++G            ++ EV++        A  + N 
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYF----------LVYEVKK--------AQHVFNA 329

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G   + +T   L+NGF +   ++ A+ LFKEM +K   P +V+Y++LI+GLCK  R
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
               +  + EM ++G   D+ITYS LI+GLC++  +D A+ L  +   +   P++  + I
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+ GLC  G+++DA +++ ++  +    N+ TYN +++G  K G  ++AL + + + +  
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
             P+  ++   +  L        A + L   + RG+L
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 232/463 (50%), Gaps = 20/463 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A++ F+ M        ++ +N ++D F K   Y  A  +  RL ++  + P+++T N++I
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILI 101

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+      +  ++ K     D+ T  + I GLC  G V+ A   + +++  G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           ++ V+Y  +I+G C+ G  +   +L  ++ GR    NV  Y+ +I  L +   V EA  +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K  +AD  T+  LI G C                   EG+L +A  L+N M   
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCI------------------EGKLKEAIGLLNEMVLK 263

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N YT N L++   +  K++ A  +   M +    P V++Y+TL++G   V    +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M   G  PD+ TY++LING C++K +D AL L  +  QK   P +  Y+ LI G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++     L   M+ R    +++TY++L+DGL K G  D+A+ ++N + ++ +RP+
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I ++ I L GLC   R+ DA E   D L +G      T+++++
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 114/203 (56%), Gaps = 9/203 (4%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +I  + KN M D+AL++F+ M++         +      LC+  +       ++ + ++G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
              DV +Y ++I+GL K+G L  A+A+F++M ++ +  N+  + IL+DG  K G    A+
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+++ L+ +   + NV TYNVMING CK G  +E L M  +M+ N    ++FT+ + I  
Sbjct: 465 EVFQDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523

Query: 251 LCKAGNVEGAERVYREMVESGIF 273
           L K    + AE++ R+M+  G+ 
Sbjct: 524 LFKKDENDKAEKLLRQMIARGLL 546



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 105/202 (51%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M     +P ++ +N +++   K++ +  A S    +  KG +PD+IT ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C   +I     +  + L++G+ PD    N LI GLC  G+V+ AL  +  +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N V+Y TL++G+ K GD   A+++   I     +P++  Y+  +  LC    +S+A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 594 EFLNDALCRGILPTTITWHILV 615
              ++   +GI    +T+  L+
Sbjct: 220 GLFSEMTVKGISADVVTYSTLI 241



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 77/173 (44%)

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           ++   +A S    ML     P +I ++ +++   + K    A+ L  +   KG  PD+  
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            NILI+  C  G++     + + + KR   P+ VT NTL+ GL   G   KAL   + +L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +  + + +SY   + G+C       A + L     R   P    +  ++ A+
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 52/104 (50%)

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S   V+DA+  ++ M      P ++ +N ++D   K      A+ + + +  + ++PD+I
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + NI +   C   +++  F  L   L RG  P T+T + L++ +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGL 139


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 288/614 (46%), Gaps = 48/614 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V+    ++++L++  +P  AL LF +A R+P   H+    +++L  +     V  ++++ 
Sbjct: 65  VVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVF 124

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
           +L++ Q           V++           +  F  +    G E G+         A  
Sbjct: 125 DLMQKQ-----------VVKT---------NVGTFATIFGGVGVEGGL-------RSAPV 157

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  + E G+  + Y+Y  +I  LVKSG    A+ V+  M E G+  +V  Y++L+  F 
Sbjct: 158 ALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFG 217

Query: 182 KKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           KK D      +W    ME   V PNV +Y + I  L +  RFDE   +  +M+ +  + D
Sbjct: 218 KKRDVDTV--LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPD 275

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             T+   I  LC AG +  A+ V+ +M  S    D VTY  ++D    +G  +   E+W 
Sbjct: 276 VVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWN 335

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M   G   N+VSY  ++  L + G+VDEA+++++ ++EK  + +  ++  LI+G  K  
Sbjct: 336 AMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKAD 395

Query: 360 YLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCN 402
             ++A+++ N +                   G  G+   A      M   G   +    N
Sbjct: 396 MFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAAN 455

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +++     + +L  A  +F E+   G SP  ++Y  +I    K  +  EA +F  +M+E 
Sbjct: 456 AVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVES 515

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  PD++  + LI+ L +  K + A +L  +  +    P    YN L+ GL   GKV++ 
Sbjct: 516 GCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEV 575

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +QL   M +    PNL+TYNT++D L K G+ + A+++   + E+   PD+ SYN  + G
Sbjct: 576 MQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYG 635

Query: 583 LCSCSRMSDAFEFL 596
           L    R+ +AF   
Sbjct: 636 LIKEERLEEAFRMF 649



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 291/624 (46%), Gaps = 34/624 (5%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-- 78
           ALA+FD   +E G +   + ++ ++   +   +     R LEL        P     +  
Sbjct: 365 ALAVFDE-MKEKGMSPEQYSYNSLISGFLKADMF---DRALELFNHMNACGPSPNGYTHV 420

Query: 79  -VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
             I  YGK+    KA+  ++ M       ++    A +  L    +   AKR    L   
Sbjct: 421 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM 480

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PD  +Y  +I    K+     A+  F +M E G   +V+  N LID  +K G    A
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +++ +L  E  + P   TYN +++GL + G+  E +++ + M +     +  TY + + 
Sbjct: 541 WQLFHKL-KEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            L K G V  A  +   M E G   D  +YN ++ G  +  +++E F ++  M +    +
Sbjct: 600 CLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPD 659

Query: 310 VVSYNILIRGLLENGKVDEAI-SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             +   ++   ++NG + EA+ ++ E + +  CN D ++   L+ G+ K   + K+I+  
Sbjct: 660 YATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFA 719

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             +   G                   +  +A  L N+    G  L   + NSL+ G +  
Sbjct: 720 ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDE 779

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           + ++ A  LF EM R GC P   +YN +++ + K  R  E     KEM  KG++   +TY
Sbjct: 780 NLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTY 839

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+GL +SK+++ A+ L    + +GF+P    Y  L+ GL  +GK+ DA  L++ M +
Sbjct: 840 NTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLE 899

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C PN   YN L++G    G+ +   +++  ++E+ + PDI SY I +  LC+  R++D
Sbjct: 900 YGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLND 959

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
              +       G+ P  I +++L+
Sbjct: 960 GLCYFRQLHELGLEPDLIVYNLLI 983



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 140/600 (23%), Positives = 290/600 (48%), Gaps = 68/600 (11%)

Query: 72   PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAKR 121
            P+ +  ++ I+   K S  D+A++ F  M E  GC   +L          +  +  +A +
Sbjct: 484  PDTITYTMMIKCCSKASKADEAMNFFSDMVE-SGCVPDVLALNSLIDTLYKGGKGNEAWQ 542

Query: 122  FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
              + L E  ++P   +Y T+++GL + G +   + + +EM       N++ YN ++D   
Sbjct: 543  LFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLS 602

Query: 182  KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
            K G+   A ++   +  E    P++ +YN ++ GL K  R +E   M+ +MKK     D 
Sbjct: 603  KNGEVNCAIDMLYSMT-EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDY 660

Query: 242  FTYCSFIHGLCKAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             T C+ +    K G ++ A    +E ++++G  VD  +++++++G  +   +++  E  E
Sbjct: 661  ATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAE 720

Query: 301  VMGRKG------------------------------------CLNVVSYNILIRGLLENG 324
             +  +G                                     L   SYN LIRGL++  
Sbjct: 721  NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 780

Query: 325  KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
             +D A  ++  ++   C  D  T+ ++++ + K+  + + +++  E              
Sbjct: 781  LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKE-------------- 826

Query: 385  LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                M + G +    T N++++G +++ +LE AI L+  +  +G SPT  +Y  L++GL 
Sbjct: 827  ----MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 882

Query: 445  KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
            K  +  +A +   EMLE G +P+   Y++L+NG   +   +   +L  + +++G  PD+ 
Sbjct: 883  KSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIK 942

Query: 505  MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             Y ILI  LC+AG++ D L  +  + +    P+L+ YN L+DGL K+   ++A+ ++N +
Sbjct: 943  SYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002

Query: 565  LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             ++ + P++ +YN  +  L    + ++A +   + L +G  P+  T++ L+R    +G++
Sbjct: 1003 KKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGST 1062



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 275/564 (48%), Gaps = 47/564 (8%)

Query: 39   HLFHHILRRLIDPKLVVH------------VSRILELIE--IQKCYCPEDVAL-SVIQAY 83
             LFH +    I+P    +            V  +++L+E   +  Y P  +   +V+   
Sbjct: 542  QLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCL 601

Query: 84   GKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPD 134
             KN   + A+D+   M E  GC   +         L ++ + E+A R    + +K L PD
Sbjct: 602  SKNGEVNCAIDMLYSMTEK-GCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPD 659

Query: 135  VYSYGTVINGLVKSGDLLGALAVFDE-MFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
              +  T++   VK+G +  AL    E + + G   +   ++ L++G  KK    ++ E  
Sbjct: 660  YATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFA 719

Query: 194  ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            E  +    +  N      +I  LCK  +  E  +++++ K       + +Y S I GL  
Sbjct: 720  EN-IASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVD 778

Query: 254  AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VS 312
               ++ AE ++ EM   G   D  TYN ++D   ++ +++E  ++ + M RKG  +  V+
Sbjct: 779  ENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVT 838

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
            YN +I GL+++ ++++AI ++  L  +  +    T+G L++GL K+G             
Sbjct: 839  YNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSG------------- 885

Query: 373  EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                 ++ DA +L N M ++GC+ N    N L+NG   A   EN   LF++M  +G +P 
Sbjct: 886  -----KMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940

Query: 433  VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            + SY  LI+ LC   R  +   + +++ E G +PD+I Y+LLI+GL +S++I+ A+ L  
Sbjct: 941  IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000

Query: 493  QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            +  +KG  P++  YN LI  L  AGK  +A Q+Y  + ++   P++ TYN L+ G   +G
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSG 1060

Query: 553  DCDKALEIWNHILEERLRPDIISY 576
              D A   +  ++    +P+  +Y
Sbjct: 1061 STDNAYAAYGQMIVGGCQPNSSTY 1084



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 267/561 (47%), Gaps = 38/561 (6%)

Query: 62  ELIEIQKCYCPEDVALSV------IQAYGKNSMPDKALDVFQRMNEIFGCEAGI------ 109
           E +E+ K    + ++ SV      + A+GK    D  L +   M E  G +  +      
Sbjct: 189 EAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM-EARGVKPNVYSYTIC 247

Query: 110 ---LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
              L +  +F++A   L  + + G KPDV ++  +I  L  +G L  A AVF +M     
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           + + V Y  L+D     GD     E+W  +V +     N+V+Y  +++ LC+ GR DE L
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD-GYNDNIVSYTAVVDALCQVGRVDEAL 366

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            ++D MK+     + ++Y S I G  KA   + A  ++  M   G   +  T+   I+ +
Sbjct: 367 AVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY 426

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            ++G+  +  + +E M  KG + +V + N ++  L  +G++  A  ++  L+    + D+
Sbjct: 427 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ ++I    K    ++A+   +++ E                   GC  +    NSL+
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVES------------------GCVPDVLALNSLI 528

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +   +  K   A  LF ++      PT  +YNTL++GL +  +  E    ++EM    + 
Sbjct: 529 DTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP 588

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P++ITY+ +++ L ++ +++ A+ +     +KG  PD++ YN +++GL    ++E+A ++
Sbjct: 589 PNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRM 648

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE-IWNHILEERLRPDIISYNITLKGLC 584
           +  MKK    P+  T  T++    K G   +AL  +  +IL+     D  S++  ++G+ 
Sbjct: 649 FCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGIL 707

Query: 585 SCSRMSDAFEFLNDALCRGIL 605
             + +  + EF  +   RGIL
Sbjct: 708 KKAGVEKSIEFAENIASRGIL 728



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 238/517 (46%), Gaps = 21/517 (4%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           N++   G   ++ SY  V++ L + G +  ALAVFDEM E+G+      YN LI GF K 
Sbjct: 335 NAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKA 394

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
             + RA E++  +       PN  T+ + IN   K G+  + ++ ++ MK      D   
Sbjct: 395 DMFDRALELFNHM-NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAA 453

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
             + ++ L  +G +  A+RV+ E+   G+  D +TY  MI    +A K  E    +  M 
Sbjct: 454 ANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 513

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             GC+ +V++ N LI  L + GK +EA  ++  L+E      + T+  L++GL + G + 
Sbjct: 514 ESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVK 573

Query: 363 KAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           + +Q+L E+                      G +  A  ++  M + GC  +  + N++M
Sbjct: 574 EVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE-MLEKGW 464
            G I+  +LE A  +F +M +K  +P   +  T++    K     EA   VKE +L+ G 
Sbjct: 634 YGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGC 692

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
             D  ++  L+ G+ +   ++ +++       +G   +      LI  LC   K  +A Q
Sbjct: 693 NVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ 752

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L++  K         +YN+L+ GL      D A +++  +      PD  +YN+ L  + 
Sbjct: 753 LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 812

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
              R+ +  +   +   +G   T +T++ ++  ++ +
Sbjct: 813 KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKS 849



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/545 (22%), Positives = 225/545 (41%), Gaps = 90/545 (16%)

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           E  VV  + ++       D   A E++     + +      + N M+  +   GR  +  
Sbjct: 62  ERRVVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMA 121

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++D M+K   + +  T+ +   G+   G +  A      M E+G+ ++A TYN +I   
Sbjct: 122 QVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFL 181

Query: 287 CRAGKIKECFELWEVMGRKGC------------------------------------LNV 310
            ++G   E  E+++ M   G                                      NV
Sbjct: 182 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNV 241

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
            SY I IR L +  + DEA  I   + +  C  D  TH V+I  LC  G L+ A  +  +
Sbjct: 242 YSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWK 301

Query: 371 VEEGGE--------------GRLADAASLV---NRMDKHGCKLNAYTCNSLMNGFIQASK 413
           ++   +              G   D+ S+V   N M   G   N  +  ++++   Q  +
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGR 361

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           ++ A+ +F EM  KG SP   SYN+LI+G  K + F  A      M   G  P+  T+ L
Sbjct: 362 VDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 421

Query: 474 LIN-----------------------------------GLCQSKKIDMALKLCCQFLQKG 498
            IN                                    L  S ++ MA ++  +    G
Sbjct: 422 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
            +PD   Y ++I     A K ++A+  +S+M +  CVP+++  N+L+D L+K G  ++A 
Sbjct: 482 VSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAW 541

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT-ITWHILVRA 617
           ++++ + E ++ P   +YN  L GL    ++ +  + L + + R I P   IT++ ++  
Sbjct: 542 QLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEE-MTRTIYPPNLITYNTVLDC 600

Query: 618 VMNNG 622
           +  NG
Sbjct: 601 LSKNG 605


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 286/614 (46%), Gaps = 49/614 (7%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A+ +++ L++   P  AL  F SA R+P  AH+    +++L  +     V  ++ + ++
Sbjct: 91  AAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDV 150

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           ++ Q           +++A          +  F  +    G E G+         A   L
Sbjct: 151 MQRQ-----------IVKA---------NVGTFAAIFGGLGVEGGL-------RSAPVAL 183

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + E G+  + Y+Y  ++  LVKSG    AL V+  M   GV  +V  Y++L+  F K+
Sbjct: 184 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR 243

Query: 184 GDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            D      +W    ME   V PNV +Y + I  L +  RFDE   +  +M+    + D  
Sbjct: 244 RDVETV--LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 301

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I  LC AG +  A+ V+ +M +S    D VTY  ++D F   G  +   E+W  M
Sbjct: 302 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 361

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G   NVV+Y  +I  L + G+V EA+ +++ +++K    +  ++  LI+G  K    
Sbjct: 362 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK---- 417

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                           R  DA  L   MD HG K N YT    +N + ++ +   AI  +
Sbjct: 418 --------------ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 463

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M  KG  P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++
Sbjct: 464 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 523

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K D A+K+    ++    PDV   N LI  L  AG+ ++A +++  +K+ N  P   TY
Sbjct: 524 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 583

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL + G   + + +   +      P++I+YN  L  LC    ++DA + L     
Sbjct: 584 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 643

Query: 602 RGILPTTITWHILV 615
           +G +P   +++ ++
Sbjct: 644 KGCIPDLSSYNTVI 657



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 272/593 (45%), Gaps = 70/593 (11%)

Query: 56  HVSRILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG- 108
            V R+ E +E+     QK   PE  +  S+I  + K      AL++F+ M+ I G +   
Sbjct: 382 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD-IHGPKPNG 440

Query: 109 --------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                      +  +  KA +    +  KG+ PDV +   V+ GL KSG L  A  VF E
Sbjct: 441 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 500

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +   GV  + + Y ++I    K   +  A +I+  ++ E +  P+V+  N +I+ L K G
Sbjct: 501 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI-ENNCVPDVLAVNSLIDTLYKAG 559

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           R DE   ++ ++K+   E    TY + + GL + G V+    +  EM  S    + +TYN
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 619

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW------ 333
            ++D  C+ G + +  ++   M  KGC+ ++ SYN +I GL++  + +EA SI+      
Sbjct: 620 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679

Query: 334 -----------------------------ELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
                                        +   +     D ++   L+ G+ K   + K+
Sbjct: 680 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 739

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           I+    +   G                 + +  +A  LV +    G  L     NSL+ G
Sbjct: 740 IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICG 799

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +  + ++ A  LF EM   GC P   +YN L++ + K  R  E     +EM  KG++  
Sbjct: 800 LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 859

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +TY+ +I+GL +S++++ A+ L    + +GF+P    Y  L+ GL  AG++EDA  L++
Sbjct: 860 YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 919

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            M +  C  N   YN L++G    G+ +K   ++  ++++ + PDI SY I +
Sbjct: 920 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/582 (24%), Positives = 269/582 (46%), Gaps = 36/582 (6%)

Query: 72  PEDVA-LSVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRF 122
           P+ V  ++++  +G N      ++++  M      + +    A I  LC+  +  +A   
Sbjct: 333 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEM 392

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + + +KG+ P+ YSY ++I+G +K+     AL +F  M   G + N   + + I+ + K
Sbjct: 393 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 452

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G+ ++A + +E L+    + P+VV  N ++ GL K GR      ++  +K      D+ 
Sbjct: 453 SGESIKAIQRYE-LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 511

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I    KA   + A +++ +M+E+    D +  N++ID   +AG+  E    W + 
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA---WRIF 568

Query: 303 GRKGCLNVV----SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +   +N+     +YN L+ GL   GKV E + + E +   N   +  T+  +++ LCKN
Sbjct: 569 YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKN 628

Query: 359 GYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTC 401
           G +N A+ +L  +   G                 E R  +A S+  +M K      A  C
Sbjct: 629 GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLC 688

Query: 402 NSLMNGFIQASKLENAIFLFKE-MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            +++  F++   ++ A+ + K+   + G      S ++L+ G+ K     ++  F + + 
Sbjct: 689 -TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIA 747

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
             G   D      LI  LC+ KK   A +L  +F   G +    +YN LI GL     ++
Sbjct: 748 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 807

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A  L++ MK+  C P+  TYN L+D + K+   ++ L++   +  +      ++YN  +
Sbjct: 808 IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 867

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GL    R+  A +   + + +G  PT  T+  L+  ++  G
Sbjct: 868 SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 909



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 215/502 (42%), Gaps = 88/502 (17%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N M+  +   GR  +  E++D M++   + +  T+ +   GL   G +  A      M E
Sbjct: 129 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 188

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--------------------- 308
           +GI ++A TYN ++    ++G  +E  E++ VM   G +                     
Sbjct: 189 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 248

Query: 309 ---------------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
                          NV SY I IR L +  + DEA  I   +  + C  D  TH VLI 
Sbjct: 249 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 308

Query: 354 GLCKNGYLNKAIQILNEVEEGGE--------------GRLADAASLV---NRMDKHGCKL 396
            LC  G ++ A  +  ++++  +              G   D+ S++   N M   G   
Sbjct: 309 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 368

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           N     ++++   Q  ++  A+ +F EM +KG  P   SYN+LI+G  K +RFG+A    
Sbjct: 369 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 428

Query: 457 KEMLEKGWKPDMITYSLLIN-----------------------------------GLCQS 481
           K M   G KP+  T+ L IN                                   GL +S
Sbjct: 429 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 488

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++ MA ++  +    G +PD   Y ++I     A K ++A++++ +M + NCVP+++  
Sbjct: 489 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 548

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N+L+D L+K G  D+A  I+  + E  L P   +YN  L GL    ++ +    L +   
Sbjct: 549 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 608

Query: 602 RGILPTTITWHILVRAVMNNGA 623
               P  IT++ ++  +  NGA
Sbjct: 609 SNYPPNLITYNTILDCLCKNGA 630



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 230/535 (42%), Gaps = 76/535 (14%)

Query: 80  IQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLNSL 126
           I  YGK+    KA+  ++ M               +FG     L +  +   AKR  + L
Sbjct: 447 INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG-----LAKSGRLGMAKRVFHEL 501

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
              G+ PD  +Y  +I    K+     A+ +F +M E     +V+  N LID  +K G  
Sbjct: 502 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG-- 559

Query: 187 MRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
            R  E W     + E ++ P   TYN ++ GL + G+  E + + + M  +    +  TY
Sbjct: 560 -RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 618

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            + +  LCK G V  A  +   M   G   D  +YN +I G  +  +  E F ++  M +
Sbjct: 619 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 678

Query: 305 ----------------------KGCLNVV--------------SYNILIRGLLENGKVDE 328
                                 K  L+++              S + L+ G+L+   +++
Sbjct: 679 VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 738

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           +I   E++       D      LI  LCK     +A +++ + +  G             
Sbjct: 739 SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 798

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               E  +  A  L   M + GC  + +T N L++   ++ ++E  + + +EM RKG   
Sbjct: 799 GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 858

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           T V+YNT+I+GL K  R  +A      ++ +G+ P   TY  L++GL ++ +I+ A  L 
Sbjct: 859 TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 918

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            + L+ G   + T+YNIL++G   AG  E    L+ +M  +   P++ +Y  ++D
Sbjct: 919 NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 20/379 (5%)

Query: 248 IHGLCKA-GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           IH L  A G  E  ER      +  +     + N M++     G++ +  E+++VM R+ 
Sbjct: 96  IHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQI 155

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV ++  +  GL   G +  A     +++E     ++ T+  L+  L K+G+  +A+
Sbjct: 156 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 215

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++                     M   G   +  T + LM  F +   +E  ++L +EM 
Sbjct: 216 EVYR------------------VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 257

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P V SY   I  L + +RF EAY  + +M  +G KPD+IT+++LI  LC + +I 
Sbjct: 258 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 317

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +  +  +    PD   Y  L+      G  +  +++++ MK      N+V Y  ++
Sbjct: 318 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 377

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D L + G   +ALE+++ + ++ + P+  SYN  + G     R  DA E        G  
Sbjct: 378 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPK 437

Query: 606 PTTITWHILVRAVMNNGAS 624
           P   T  + +     +G S
Sbjct: 438 PNGYTHVLFINYYGKSGES 456


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 267/554 (48%), Gaps = 35/554 (6%)

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           A G+ +   +ALD       +    A I   CR  Q   A+R   ++    + P+ Y+Y 
Sbjct: 56  AAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYF 112

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            ++  L   G +  AL V DEM  RG        +++++   + G +  A    + L  +
Sbjct: 113 PIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAK 172

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
                +    N++++ +C+ G  DE +E+  ++     E D  +Y + + GLC A   + 
Sbjct: 173 GCTL-DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDD 231

Query: 260 AERVYREMV----------ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            E +  EMV          E G   D   Y  +IDG C+ G  +   ++   M   G   
Sbjct: 232 VEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKP 291

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV YN +++GL    + +EA  +   + +++C  D  T  +L++  C+NG +++ I++L
Sbjct: 292 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELL 351

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M +HGC  +  T  +++NGF +   ++ A+ L K MS  G
Sbjct: 352 EQ------------------MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P  +SY  ++ GLC+ ER+ +A   +  M+++G  P+ +T++ LIN +C+    + A+
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAI 453

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  Q L  G +PD+  Y+ +I GL  AGK E+AL+L + M  +   PN + Y+++   L
Sbjct: 454 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            + G  DK +++++ I +  +R D   YN  +  LC       A +F    +  G +P  
Sbjct: 514 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 573

Query: 609 ITWHILVRAVMNNG 622
            T+ IL+R + + G
Sbjct: 574 STYTILIRGLASEG 587



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 208/470 (44%), Gaps = 63/470 (13%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   F  A R L  L  KG   D  +   V++ + + G +   + +  ++   G E ++
Sbjct: 154 CRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDI 213

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVM---------ETSVYPNVVTYNVMINGLCKCGR 221
           V YN ++ G      +   +E+   +V          E    P++  Y  +I+G+CK G 
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 273

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            +   ++  RM     + +   Y + + GLC A   E AE +  EM +    +D VT+N 
Sbjct: 274 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 333

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++D FC+ G +    EL E M   GC+ +V++Y  +I G  + G VDEA+ + + +    
Sbjct: 334 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C  ++ ++ +++ GLC+                    R  DA  L++ M + GC  N  T
Sbjct: 394 CKPNTISYTIVLKGLCR------------------AERWVDAQELISHMIQQGCLPNPVT 435

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N+L+N   +    E AI L K+M   GCSP ++SY+T+I+GL K  +  EA   +  M+
Sbjct: 436 FNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 495

Query: 461 EKGWKPDMITYS-----------------------------------LLINGLCQSKKID 485
            KG  P+ I YS                                    +I+ LC+  + D
Sbjct: 496 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETD 555

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            A+      +  G  P+ + Y ILI GL S G V +A  L S +  R  V
Sbjct: 556 RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI  LC+AG+  DA +             +V YN ++ G  + G    A  +   +    
Sbjct: 50  LIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAV---P 103

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + P+  +Y   ++ LC+   ++DA   L++   RG   T    H+++ A    G
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG 157


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 226/453 (49%), Gaps = 21/453 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+ Q   A   L  + + G  P + +  +++NG      +  A+A+ D+M E G + +
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +  L+ G F+      A  + ER+V++    P++VTY  +INGLCK G  D  L + 
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M+K + E D   Y + I GLCK  +++ A  ++ +M   GI  D  TYN +I   C  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTT 347
           G+  +   L   M  K    ++V +N LI   ++ GK+ EA  ++ E+++ K+C  D   
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI G CK             VEEG E        +   M + G   N  T  +L++G
Sbjct: 359 YNTLIKGFCK----------YKRVEEGME--------VFREMSQRGLVGNTVTYTTLIHG 400

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F QA   +NA  +FK+M   G  P +++YN L++GLC       A    + M ++  K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++TY+ +I  LC++ K++    L C    KG  P+V  Y  ++ G C  G  E+A  L+ 
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            MK+   +PN  TYNTL+    + GD   + E+
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 250/493 (50%), Gaps = 23/493 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       +++ ++M   G+  N+  Y+I I+ F ++     A  I
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT N ++NG C   R  E + + D+M +   + D+ T+ + +HGL 
Sbjct: 133 LGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NV 310
           +      A  +   MV  G   D VTY A+I+G C+ G+      L   M  KG +  +V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADV 250

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V YN +I GL +   +D+A  ++  +  K    D  T+  LI+ LC              
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN------------- 297

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR-KGC 429
                 GR +DA+ L++ M +     +    N+L++ F++  KL  A  L+ EM + K C
Sbjct: 298 -----YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P VV+YNTLI G CK +R  E     +EM ++G   + +TY+ LI+G  Q++  D A  
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  Q +  G  PD+  YNIL+ GLC+ G VE AL ++  M+KR+   ++VTY T+++ L 
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  +   +++  +  + ++P++++Y   + G C      +A     +    G LP + 
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532

Query: 610 TWHILVRAVMNNG 622
           T++ L+RA + +G
Sbjct: 533 TYNTLIRARLRDG 545



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 229/456 (50%), Gaps = 23/456 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  ++Y+Y   IN   +   L  ALA+  +M + G   ++V  N L++GF        A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++V E    P+ VT+  +++GL +  +  E + + +RM     + D  TY + I+
Sbjct: 165 VALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLCK G  + A  +  +M +  I  D V YN +IDG C+   + + F+L+  M  KG   
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +YN LI  L   G+  +A  +   + EKN N D      LI+   K           
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK----------- 332

Query: 369 NEVEEGGEGRLADAASLVNRM--DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                  EG+L +A  L + M   KH C  +    N+L+ GF +  ++E  + +F+EMS+
Sbjct: 333 -------EGKLVEAEKLYDEMVKSKH-CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G     V+Y TLI+G  +      A    K+M+  G  PD++TY++L++GLC +  ++ 
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL +     ++    D+  Y  +I  LC AGKVED   L+ ++  +   PN+VTY T+M 
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           G  + G  ++A  ++  + E+   P+  +YN  ++ 
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 193/384 (50%), Gaps = 12/384 (3%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN          A+AL D    E GY      F  ++  L           ++
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203

Query: 62  ELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCR 112
           E + ++ C  P+ V   +VI    K   PD AL++  +M +        I+      LC+
Sbjct: 204 ERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            +  + A    N +  KG+KPDV++Y  +I+ L   G    A  +  +M E+ +  ++V 
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N LID F K+G  + A+++++ +V     +P+VV YN +I G CK  R +E +E++  M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +     ++ TY + IHG  +A + + A+ V+++MV  G+  D +TYN ++DG C  G +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +    ++E M ++   L++V+Y  +I  L + GKV++   ++  L  K    +  T+  +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502

Query: 352 INGLCKNGYLNKAIQILNEVEEGG 375
           ++G C+ G   +A  +  E++E G
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDG 526



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           +L DA  L   M K     +    + L++   + +K +  I L ++M   G S  + +Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
             IN  C+  +   A + + +M++ G+ P ++T + L+NG C   +I  A+ L  Q ++ 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+ PD   +  L+HGL    K  +A+ L   M  + C P+LVTY  +++GL K G+ D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           L + N + + ++  D++ YN  + GLC    M DAF+  N    +GI P   T++ L+  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 618 VMNNG 622
           + N G
Sbjct: 295 LCNYG 299



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 65/146 (44%)

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q  K+D A+ L    ++    P +  ++ L+  +    K +  + L   M+      NL 
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY+  ++   +      AL I   +++    P I++ N  L G C  +R+S+A   ++  
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 600 LCRGILPTTITWHILVRAVMNNGAST 625
           +  G  P T+T+  LV  +  +  ++
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKAS 197


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 172/622 (27%), Positives = 290/622 (46%), Gaps = 96/622 (15%)

Query: 96  FQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLL 152
           F+   ++F C   +   CR    +KA  F        GL+ +V +Y ++ING    GD+ 
Sbjct: 219 FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVE 278

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           G   V   M ERGV  NVV Y  LI G+ KKG    A+ ++E L+ E  +  +   Y V+
Sbjct: 279 GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE-LLKEKKLVADQHMYGVL 337

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++G C+ G+  + + + D M +     ++    S I+G CK+G +  AE+++  M +  +
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             D  TYN ++DG+CRAG + E  +L + M +K  +  V++YNIL++G    G   + +S
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457

Query: 332 IWELLREKNCNAD-----------------------------------STTHGVLINGLC 356
           +W+++ ++  NAD                                   + T  V+I+GLC
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517

Query: 357 KNGYLNKAIQILNEV---------------EEG--GEGRLADAASLVNRMDKHGCKLNAY 399
           K   +N+A +IL+ V                 G    G L +A ++   M++ G      
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N+L++G  +   L     L  E+  +G +PTV +Y  LI G C +    +AY+   EM
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCC----------------QFLQKGFT--- 500
           +EKG   ++   S + N L +  KID A  L                  +FL+   T   
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697

Query: 501 -------------------PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVT 540
                              P+  +YN+ I GLC AGK+EDA +L+S++   +  +P+  T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ G    GD +KA  + + +  + + P+I++YN  +KGLC    +  A   L+   
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817

Query: 601 CRGILPTTITWHILVRAVMNNG 622
            +GI P  IT++ L+  ++ +G
Sbjct: 818 QKGITPNAITYNTLIDGLVKSG 839



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 249/557 (44%), Gaps = 66/557 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I+ Y K  + ++A  VF+ + E        ++G      CR  Q   A R  +++ E 
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++ +     ++ING  KSG L+ A  +F  M +  ++ +   YN L+DG+ + G    A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++ +++  +  V P V+TYN+++ G  + G F + L +W  M K     D  +  + + 
Sbjct: 421 LKLCDQMC-QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            L K G+   A +++  ++  G+  D +T N MI G C+  K+ E  E+ + +    C  
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539

Query: 310 VV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            V +Y  L  G  + G + EA ++ E +  K        +  LI+G  K  +LNK   ++
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLV 599

Query: 369 NEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E+   G                  G +  A +    M + G  LN   C+ + N   + 
Sbjct: 600 IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 659

Query: 412 SKLENAIFL-------------------FKEMSRKGC-------------------SPTV 433
            K++ A  L                   F E S   C                    P  
Sbjct: 660 DKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNN 719

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCC 492
           + YN  I GLCK  +  +A     ++L    + PD  TY++LI+G   +  I+ A  L  
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +   KG  P++  YN LI GLC  G V+ A +L   + ++   PN +TYNTL+DGL K+G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839

Query: 553 DCDKALEIWNHILEERL 569
           +  +A+ +   ++E+ L
Sbjct: 840 NVAEAMRLKEKMIEKGL 856



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 19/417 (4%)

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMI 283
            L ++D+M   E   D FT    ++  C++GNV+ A    +E   S G+ ++ VTYN++I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           +G+   G ++    +  +M  +G   NVV+Y  LI+G  + G ++EA  ++ELL+EK   
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
           AD   +GVL++G C+ G +  A+++ + + E G                  G+L +A  +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            +RM+    K + +T N+L++G+ +A  ++ A+ L  +M +K   PTV++YN L+ G  +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           +  F +  S  K ML++G   D I+ S L+  L +    + A+KL    L +G   D   
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            N++I GLC   KV +A ++  N+    C P + TY  L  G +K G+  +A  +  ++ 
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + + P I  YN  + G      ++   + + +   RG+ PT  T+  L+    N G
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 29/430 (6%)

Query: 192 IWERLVM---ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           +W  LV    E S  P V  +++++    + G     L ++D M    R     +  S +
Sbjct: 140 VWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLL 197

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF----ELWEVMGR 304
             L + G    A  VY +M+   +  D  T + +++ +CR+G + +      E    +G 
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGL 257

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           +  LNVV+YN LI G    G V+    +  L+ E+  + +  T+  LI G CK G + +A
Sbjct: 258 E--LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
             +   ++E           LV     +G          LM+G+ +  ++ +A+ +   M
Sbjct: 316 EHVFELLKE---------KKLVADQHMYGV---------LMDGYCRTGQIRDAVRVHDNM 357

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              G        N+LING CK  +  EA      M +   KPD  TY+ L++G C++  +
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D ALKLC Q  QK   P V  YNIL+ G    G   D L L+  M KR    + ++ +TL
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           ++ LFK GD ++A+++W ++L   L  D I+ N+ + GLC   ++++A E L++      
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537

Query: 605 LPTTITWHIL 614
            P   T+  L
Sbjct: 538 KPAVQTYQAL 547



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 203/418 (48%), Gaps = 35/418 (8%)

Query: 223 DECLEMWDRMKKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYREMV---ESGIFV---- 274
           + CLE+++   K ++ +  +  YC  +H L +A N +  +    E+V    SG  V    
Sbjct: 85  EACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGEL 144

Query: 275 ---------DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
                        ++ ++  +   G +K    +++ MG  G + +++S N L+  L+  G
Sbjct: 145 VRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKG 204

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           +   A+ +++ +     + D  T  +++N  C++G ++KA+    E E          +S
Sbjct: 205 ENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETE----------SS 254

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L       G +LN  T NSL+NG+     +E    + + MS +G S  VV+Y +LI G C
Sbjct: 255 L-------GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYC 307

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K     EA    + + EK    D   Y +L++G C++ +I  A+++    ++ G   + T
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           + N LI+G C +G++ +A Q++S M   +  P+  TYNTL+DG  + G  D+AL++ + +
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++ + P +++YNI LKG        D        L RG+    I+   L+ A+   G
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 39/275 (14%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV--- 170
           R   K    +  L  +GL P V +YG +I G    G +  A A   EM E+G+  NV   
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649

Query: 171 -----------------------VCYNILIDGFFKKGDYMRA--------KEIWERLVME 199
                                  V +++L+ G+    +++ A        ++I E +   
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENS 709

Query: 200 TS---VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAG 255
           T    + PN + YNV I GLCK G+ ++  +++  +  ++R   D +TY   IHG   AG
Sbjct: 710 TPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG 769

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
           ++  A  +  EM   GI  + VTYNA+I G C+ G +     L   + +KG   N ++YN
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            LI GL+++G V EA+ + E + EK     S   G
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 864



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N + YN+ I G  K G    A++++  L+      P+  TY ++I+G    G  ++   +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M       +  TY + I GLCK GNV+ A+R+  ++ + GI  +A+TYN +IDG  +
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVD 327
           +G + E   L E M  KG         L+RG  + G VD
Sbjct: 838 SGNVAEAMRLKEKMIEKG---------LVRGSDKQGDVD 867


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 265/557 (47%), Gaps = 39/557 (7%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELI-EIQKCYCPEDVALSVIQAYGKNSMPDKA 92
           + H+P      L RL  P L    S +  LI E    + P  +A S+     ++ +P  +
Sbjct: 43  HGHTPSAATLSLLRL-SPGLA---SELYALIAEPSHAFTPASLA-SLHSLAARHRIPPPS 97

Query: 93  LDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
             +  ++   F   A         E A    +SL      PD+  + +++  L ++G+L 
Sbjct: 98  ALLLSKLVRRFSSPA---------EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLR 148

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNV 211
           G   +F  M +  V+ +VV Y IL++G  K G    A ++ +R+    S V P++   N 
Sbjct: 149 GMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNT 208

Query: 212 MINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           +++GLCK GR  + +   D   ++      ++ TY       C+ G++  A ++   M +
Sbjct: 209 VVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEK 268

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWE---VMGRKGCLNVVSYNILIRGLLENGKV 326
            G+  + +T N +I G CR G++    E +     +  +   N V+Y+ L    L    V
Sbjct: 269 EGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNV 328

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D A+ ++  + +     D+  +  +I+GL +                   GRL DA +  
Sbjct: 329 DMAMELFHEMADHGHRPDAVMYFTMISGLTQ------------------AGRLLDACTTA 370

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M K G KL+A   N L+ GF +  KL  A  L +EM   G  P V +YNTL++GLCK 
Sbjct: 371 ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKA 430

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
             F      +  M++ G +P ++T+  L++G C++ K D AL++     +    P+  +Y
Sbjct: 431 GDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIY 490

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N LI  LC + +V+ A++L+  M+++N   N+ TYN L+ GL      +KA E+ + + E
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550

Query: 567 ERLRPDIISYNITLKGL 583
           ER  P+ ++ ++ ++ L
Sbjct: 551 ERCTPNYVTVDVLMEWL 567



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 246/536 (45%), Gaps = 41/536 (7%)

Query: 31  EPGYAHSP----HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKN 86
           EP +A +P     L     R  I P   + +S++     +++   P + A   ++    +
Sbjct: 71  EPSHAFTPASLASLHSLAARHRIPPPSALLLSKL-----VRRFSSPAEAA-GFLRDSLAS 124

Query: 87  SMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
             P   + +F  +    G       R            S+ +  +KPDV +YG ++NGL 
Sbjct: 125 GAPAPDISIFNSLLTALG-------RAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLC 177

Query: 147 KSGDLLGALAVFDEMFERGVET--NVVCYNILIDGFFKKGDYMRAKE-IWERLVMETSVY 203
           KSG +  AL V D M   G +   ++   N ++DG  K G   +A   + ER+       
Sbjct: 178 KSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCA 237

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN VTYN + +  C+ G      ++  RM+K     +  T  + I GLC+ G V  A   
Sbjct: 238 PNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEF 297

Query: 264 YRE--MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
           +RE   V      +AVTY+ +   F     +    EL+  M   G   + V Y  +I GL
Sbjct: 298 FREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G++ +A +    +++     D+  + +LI G C+   L++A ++L E          
Sbjct: 358 TQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEE---------- 407

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M   G + + YT N+L++G  +A        L   M   GC P+VV++ TL+
Sbjct: 408 --------MKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLV 459

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  EA    + M E   +P+ + Y+ LI+ LC+S+++D+A+KL  +  +K   
Sbjct: 460 HGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            +VT YN L+ GL      E A +L   M++  C PN VT + LM+ L + G+ ++
Sbjct: 520 ANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 21/422 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++  +N ++  L + G      E++  M+    + D  TY   ++GLCK+G+V  A +V
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 264 YREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GCL-NVVSYNILIR 318
              M   G  V  D    N ++DG C+ G++++     +   R   GC  N V+YN L  
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
                G +  A  I   + ++    +  T   +I GLC+ G +  A++   E        
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE-------- 300

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                    R      + NA T ++L + F+  + ++ A+ LF EM+  G  P  V Y T
Sbjct: 301 --------KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+GL +  R  +A +    M + G+K D   Y++LI G C+ KK+  A +L  +    G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PDV  YN L+ GLC AG      +L  +M    C P++VT+ TL+ G  K G  D+AL
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            I+  + E R++P+ + YN  +  LC    +  A +  ++   + +     T++ L++ +
Sbjct: 473 RIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGL 532

Query: 619 MN 620
            +
Sbjct: 533 QD 534



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 160/340 (47%), Gaps = 25/340 (7%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++  +N L+  L   G +     ++  +R+ +   D  T+G+L+NGLCK+G++  A+++L
Sbjct: 130 DISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVL 189

Query: 369 NEVEEGGE-------------------GRLADAASLVN-RMDK-HGCKLNAYTCNSLMNG 407
           + +   G                    GRL  A   V+ RM   HGC  NA T N L + 
Sbjct: 190 DRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADA 249

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW--- 464
           F +   +  A  +   M ++G +P V++ NT+I GLC+V R G A  F +E     W   
Sbjct: 250 FCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREK-RTVWPEA 308

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           + + +TYS L +       +DMA++L  +    G  PD  MY  +I GL  AG++ DA  
Sbjct: 309 RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACT 368

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
             ++MKK     +   YN L+ G  +     +A E+   +    L+PD+ +YN  L GLC
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
                S   E L   +  G  P+ +T+  LV      G +
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKT 468



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 12/219 (5%)

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +S  E A FL   ++    +P +  +N+L+  L +             M +   KPD++T
Sbjct: 109 SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVT 168

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           Y +L+NGLC+S  +  ALK+  +    G    PD+ + N ++ GLC  G+++ A+ ++ +
Sbjct: 169 YGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVD 227

Query: 529 MKKRN---CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            + R+   C PN VTYN L D   + GD   A +I   + +E + P++I+ N  + GLC 
Sbjct: 228 ERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCR 287

Query: 586 CSRMSDAFEFLNDALCRGILP----TTITWHILVRAVMN 620
             R+  A EF  +   R + P      +T+  L  A ++
Sbjct: 288 VGRVGAALEFFREK--RTVWPEARGNAVTYSTLASAFLH 324



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  CRK++  +A   L  +   GL+PDVY+Y T+++GL K+GD      +   M + G +
Sbjct: 390 GGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQ 449

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV +  L+ G+ K G    A  I+ R + E  + PN V YN +I+ LCK    D  ++
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALRIF-RSMDEARIQPNTVIYNTLIDFLCKSREVDVAIK 508

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++D M++     +  TY + + GL      E A  +   M E     + VT + +++   
Sbjct: 509 LFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLP 568

Query: 288 RAGKIK--ECF 296
             G+ +  +CF
Sbjct: 569 EIGETERLKCF 579


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 290/628 (46%), Gaps = 70/628 (11%)

Query: 56   HVSRILELIEI-----QKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAG- 108
             V R+ E +E+     QK   PE  +  S+I  + K      AL++F+ M +I G +   
Sbjct: 472  QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM-DIHGPKPNG 530

Query: 109  --------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
                       +  +  KA +    +  KG+ PDV +   V+ GL KSG L  A  VF E
Sbjct: 531  YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 590

Query: 161  MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
            +   GV  + + Y ++I    K   +  A +I+  ++ E +  P+V+  N +I+ L K G
Sbjct: 591  LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI-ENNCVPDVLAVNSLIDTLYKAG 649

Query: 221  RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            R DE   ++ ++K+   E    TY + + GL + G V+    +  EM  S    + +TYN
Sbjct: 650  RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 709

Query: 281  AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW------ 333
             ++D  C+ G + +  ++   M  KGC+ ++ SYN +I GL++  + +EA SI+      
Sbjct: 710  TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769

Query: 334  -----------------------------ELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
                                         +   +     D ++   L+ G+ K   + K+
Sbjct: 770  LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 829

Query: 365  IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            I+    +   G                 + +  +A  LV +    G  L     NSL+ G
Sbjct: 830  IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICG 889

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +  + ++ A  LF EM   GC P   +YN L++ + K  R  E     +EM  KG++  
Sbjct: 890  LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 949

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             +TY+ +I+GL +S++++ A+ L    + +GF+P    Y  L+ GL  AG++EDA  L++
Sbjct: 950  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 1009

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
             M +  C  N   YN L++G    G+ +K   ++  ++++ + PDI SY I +  LC   
Sbjct: 1010 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069

Query: 588  RMSDAFEFLNDALCRGILPTTITWHILV 615
            +++D   +    L  G+ P  IT+++L+
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLI 1097



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/614 (27%), Positives = 285/614 (46%), Gaps = 49/614 (7%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A+ +++ L++   P  AL  F SA R+P  A +    +++L  +     V  ++ + ++
Sbjct: 181 AAEDVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDV 240

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           ++ Q           +++A          +  F  +    G E G+         A   L
Sbjct: 241 MQRQ-----------IVKA---------NVGTFAAIFGGLGVEGGL-------RSAPVAL 273

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + E G+  + Y+Y  ++  LVKSG    AL V+  M   GV  +V  Y++L+  F K+
Sbjct: 274 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR 333

Query: 184 GDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            D      +W    ME   V PNV +Y + I  L +  RFDE   +  +M+    + D  
Sbjct: 334 RDVETV--LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 391

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T+   I  LC AG +  A+ V+ +M +S    D VTY  ++D F   G  +   E+W  M
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G   NVV+Y  +I  L + G+V EA+ +++ +++K    +  ++  LI+G  K    
Sbjct: 452 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK---- 507

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                           R  DA  L   MD HG K N YT    +N + ++ +   AI  +
Sbjct: 508 --------------ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 553

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M  KG  P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++
Sbjct: 554 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 613

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K D A+K+    ++    PDV   N LI  L  AG+ ++A +++  +K+ N  P   TY
Sbjct: 614 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 673

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL + G   + + +   +      P++I+YN  L  LC    ++DA + L     
Sbjct: 674 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 733

Query: 602 RGILPTTITWHILV 615
           +G +P   +++ ++
Sbjct: 734 KGCIPDLSSYNTVI 747



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 240/502 (47%), Gaps = 59/502 (11%)

Query: 100  NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF- 158
            N I  C    LC+      A   L S+  KG  PD+ SY TVI GLVK      A ++F 
Sbjct: 709  NTILDC----LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 764

Query: 159  ----------------------------------DEMFERGVETNVVCYNILIDGFFKKG 184
                                              D   + G +T+    + L++G  KK 
Sbjct: 765  QMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 824

Query: 185  DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               ++ E  E ++  + +  +      +I  LCK  +  E  E+  + K       +  Y
Sbjct: 825  GIEKSIEFAE-IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 883

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
             S I GL     ++ AE ++ EM E G   D  TYN ++D   ++ +I+E  ++ E M R
Sbjct: 884  NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 943

Query: 305  KGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            KG  +  V+YN +I GL+++ ++++AI ++  L  +  +    T+G L++GL K      
Sbjct: 944  KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK------ 997

Query: 364  AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         GR+ DA +L N M ++GCK N    N L+NG   A   E    LF++
Sbjct: 998  ------------AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045

Query: 424  MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            M  +G +P + SY  +I+ LCK  +  +  ++ +++LE G +PD+ITY+LLI+GL +SK+
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105

Query: 484  IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            ++ A+ L  +  +KG  P++  YN LI  L  AGK  +A ++Y  +  +   PN+ TYN 
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1165

Query: 544  LMDGLFKTGDCDKALEIWNHIL 565
            L+ G   +G  D A   +  ++
Sbjct: 1166 LIRGYSVSGSTDSAYAAYGRMI 1187



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 267/604 (44%), Gaps = 76/604 (12%)

Query: 80   IQAYGKNSMPDKALDVFQRMNE-------------IFGCEAGILCRKRQFEKAKRFLNSL 126
            I  YGK+    KA+  ++ M               +FG     L +  +   AKR  + L
Sbjct: 537  INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG-----LAKSGRLGMAKRVFHEL 591

Query: 127  WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
               G+ PD  +Y  +I    K+     A+ +F +M E     +V+  N LID  +K G  
Sbjct: 592  KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG-- 649

Query: 187  MRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
             R  E W     + E ++ P   TYN ++ GL + G+  E + + + M  +    +  TY
Sbjct: 650  -RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 708

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
             + +  LCK G V  A  +   M   G   D  +YN +I G  +  +  E F ++  M +
Sbjct: 709  NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 768

Query: 305  ----------------------KGCLNVV--------------SYNILIRGLLENGKVDE 328
                                  K  L+++              S + L+ G+L+   +++
Sbjct: 769  VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 828

Query: 329  AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
            +I   E++       D      LI  LCK     +A +++ + +  G             
Sbjct: 829  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 888

Query: 376  ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                E  +  A  L   M + GC  + +T N L++   ++ ++E  + + +EM RKG   
Sbjct: 889  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 948

Query: 432  TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            T V+YNT+I+GL K  R  +A      ++ +G+ P   TY  L++GL ++ +I+ A  L 
Sbjct: 949  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 1008

Query: 492  CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
             + L+ G   + T+YNIL++G   AG  E    L+ +M  +   P++ +Y  ++D L K 
Sbjct: 1009 NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1068

Query: 552  GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
            G  +  L  +  +LE  L PD+I+YN+ + GL    R+ +A    N+   +GI+P   T+
Sbjct: 1069 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1128

Query: 612  HILV 615
            + L+
Sbjct: 1129 NSLI 1132



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 259/545 (47%), Gaps = 57/545 (10%)

Query: 117  EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            ++A R    L E  L+P   +Y T++ GL + G +   + + +EM+      N++ YN +
Sbjct: 652  DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 711

Query: 177  IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
            +D   K G    A ++   +  +  + P++ +YN +I GL K  R++E   ++ +MKK  
Sbjct: 712  LDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-V 769

Query: 237  REKDSFTYCSFIHGLCKAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D  T C+ +    K G ++ A  + ++  ++ G   D  + +++++G  +   I++ 
Sbjct: 770  LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 829

Query: 296  FELWEVMGRKG------------------------------------CLNVVSYNILIRG 319
             E  E++   G                                     L    YN LI G
Sbjct: 830  IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICG 889

Query: 320  LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
            L++   +D A  ++  ++E  C  D  T+ +L++ + K+  + + +++  E         
Sbjct: 890  LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE--------- 940

Query: 380  ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                     M + G +    T N++++G +++ +LE AI L+  +  +G SPT  +Y  L
Sbjct: 941  ---------MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPL 991

Query: 440  INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
            ++GL K  R  +A +   EMLE G K +   Y++L+NG   +   +    L    + +G 
Sbjct: 992  LDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 1051

Query: 500  TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
             PD+  Y I+I  LC AG++ D L  +  + +    P+L+TYN L+DGL K+   ++A+ 
Sbjct: 1052 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1111

Query: 560  IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            ++N + ++ + P++ +YN  +  L    + ++A +   + L +G  P   T++ L+R   
Sbjct: 1112 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYS 1171

Query: 620  NNGAS 624
             +G++
Sbjct: 1172 VSGST 1176



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 234/494 (47%), Gaps = 20/494 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +K +V ++  +  GL   G L  A      M E G+  N   YN L+    K G    A 
Sbjct: 246 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 305

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E++ R++M   V P+V TY+V++    K    +  L +   M+ +  + + ++Y   I  
Sbjct: 306 EVY-RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 364

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLN 309
           L +A   + A R+  +M   G   D +T+  +I   C AG+I +  ++ W++       +
Sbjct: 365 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 424

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  L+    +NG     + IW  ++    N +   +  +I+ LC+ G + +A+++ +
Sbjct: 425 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 484

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E                  M + G     Y+ NSL++GF++A +  +A+ LFK M   G 
Sbjct: 485 E------------------MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P   ++   IN   K     +A    + M  KG  PD++  + ++ GL +S ++ MA +
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +    G +PD   Y ++I     A K ++A++++ +M + NCVP+++  N+L+D L+
Sbjct: 587 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 646

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D+A  I+  + E  L P   +YN  L GL    ++ +    L +       P  I
Sbjct: 647 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 706

Query: 610 TWHILVRAVMNNGA 623
           T++ ++  +  NGA
Sbjct: 707 TYNTILDCLCKNGA 720



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 171/361 (47%), Gaps = 24/361 (6%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC++++  +A   +      G+      Y ++I GLV    +  A  +F EM E G   +
Sbjct: 855  LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 914

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWE-RLVMETSVYPNV-VTYNVMINGLCKCGRFDECLE 227
               YN+L+D     G  MR +E+ + +  M    Y +  VTYN +I+GL K  R ++ ++
Sbjct: 915  EFTYNLLLDAM---GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 971

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            ++  +          TY   + GL KAG +E AE ++ EM+E G   +   YN +++G  
Sbjct: 972  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 1031

Query: 288  RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             AG  ++   L++ M  +G   ++ SY I+I  L + G++++ ++ +  L E     D  
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            T+ +LI+GL                  G   RL +A SL N M K G   N YT NSL+ 
Sbjct: 1092 TYNLLIDGL------------------GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1133

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
               +A K   A  +++E+  KG  P V +YN LI G         AY+    M+  G  P
Sbjct: 1134 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1193

Query: 467  D 467
            +
Sbjct: 1194 N 1194


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 175/695 (25%), Positives = 310/695 (44%), Gaps = 87/695 (12%)

Query: 3   ISAKRLLNLLKAEK---NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +A     +P TALA F+   R PG+ H+      +L+ L   +   +  +
Sbjct: 50  VTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDK 109

Query: 60  ILELIEIQKCY-CPEDV--ALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI------- 109
           ++  + +  C    ED+  A+  IQA  +     +       M  + GC           
Sbjct: 110 LV--VSMVSCSDTAEDMREAVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILI 167

Query: 110 --LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             LC  R   +A   L  + + G   ++++Y  +I GL K G + GA  V +EM  RGV 
Sbjct: 168 QGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVV 227

Query: 168 TNVVCYNILIDGFFKKG---DYMRAKEIWER---------------------------LV 197
            +V  YN +IDG+ K G   D +  K + ER                           L+
Sbjct: 228 PSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELL 287

Query: 198 METSV---YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +  V    P V+T+  +ING CK  R D+ L +   M  +  + D   Y   I+ L K 
Sbjct: 288 NDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKK 347

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
              + A+    EM  +G+  + V Y ++IDG+C+ GK+    E++ +M  +GC  N  +Y
Sbjct: 348 CRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTY 407

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           + LI GL+++ K+ +A+++   ++E        T+  LI G CK    + A ++   +E+
Sbjct: 408 SSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GR  +A S + R    G  L   T  SL++GF +A   + 
Sbjct: 468 NGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDF 524

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L ++M  +GC     +Y+ L+  LCK ++  EA S + +M   G K +++ Y+++I+
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIIS 584

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            + +  K D A  +  + +  G  P  T Y + I   C  G++E+A  L   M++    P
Sbjct: 585 EMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP 644

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK--------------- 581
           ++VTYN  ++G    G  D+A      +++    P+  +Y I LK               
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT 704

Query: 582 -GLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            G+ +   +   ++ L   +  G+ PT +T+  ++
Sbjct: 705 SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSII 739



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 242/507 (47%), Gaps = 26/507 (5%)

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------- 110
           +  L+E + C        S+I    ++    KA+ +  +M E  G   G++         
Sbjct: 391 VFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQ 449

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +F+ A R    + + GL PD  +Y  + + L KSG    A   +  +  +GV    
Sbjct: 450 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR---AEEAYSFLVRKGVVLTK 506

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  L+DGF K G+   A  + E++V E     +  TY+V++  LCK  + +E L + D
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADSYTYSVLLQALCKQKKLNEALSILD 565

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  +  + +   Y   I  + K G  + A+ ++ EM+ SG    A TY   I  +C+ G
Sbjct: 566 QMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIG 625

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I+E   L   M R G   +VV+YN+ I G    G +D A S  + + + +C  +  T+ 
Sbjct: 626 QIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYW 685

Query: 350 VLINGLCK----NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
           +L+    K    + +      + N +E      L     L+ RM KHG    A T +S++
Sbjct: 686 ILLKHFLKMSLVDAHYVDTSGMWNWIE------LDTVWQLLERMVKHGLNPTAVTYSSII 739

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            GF +A++LE A  LF  M  K  SP    Y  LI   C ++ FG+A SFV +M+E G++
Sbjct: 740 AGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQ 799

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           P + +Y  LI GLC     D A  L C  L  + +  +   + IL  GL  AG V+   Q
Sbjct: 800 PHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQ 859

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKT 551
           L S M+ R+C  +  TY+ + D + + 
Sbjct: 860 LLSAMENRHCQIDSETYSMVTDNIHEA 886



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 244/571 (42%), Gaps = 87/571 (15%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQF 116
           I + + P  +  + +I  Y K    D AL V   M         + +G    +L +K +F
Sbjct: 291 IVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRF 350

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++AK  ++ ++  GL P+V  Y ++I+G  K G +  AL VF  M   G   N   Y+ L
Sbjct: 351 KEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSL 410

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  +     +A  +  ++  E  + P V+TY  +I G CK   FD    +++ M++N 
Sbjct: 411 IYGLIQDQKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNG 469

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y    H LCK+G    AE  Y  +V  G+ +  VTY +++DGF +AG      
Sbjct: 470 LTPDEQAYNVLTHALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAA 526

Query: 297 ELWEVMGRKGC------------------------------------LNVVSYNILIRGL 320
            L E M  +GC                                     N+V+Y I+I  +
Sbjct: 527 VLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEM 586

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           ++ GK D A S++  +        +TT+ V I+  CK G + +A  ++ E+E  G     
Sbjct: 587 IKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDV 646

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS----------- 412
                        G +  A S + RM    C+ N +T   L+  F++ S           
Sbjct: 647 VTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSG 706

Query: 413 -----KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                +L+    L + M + G +PT V+Y+++I G CK  R  EA      M  K   P+
Sbjct: 707 MWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPN 766

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y++LI   C  K    A+      ++ GF P +  Y+ LI GLC  G  + A  L+ 
Sbjct: 767 EEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFC 826

Query: 528 N---MKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +   M+  N   N V +  L DGL K G  D
Sbjct: 827 DLLGMEDYN--HNEVAWKILNDGLLKAGHVD 855



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 245/560 (43%), Gaps = 80/560 (14%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + + A R   S+     K D+ +YG +IN L+K      A     EMF  G+  NV
Sbjct: 310 CKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNV 369

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +IDG+ K G    A E++ RL+      PN  TY+ +I GL +  +  + + +  
Sbjct: 370 VIYTSIIDGYCKVGKVGAALEVF-RLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 428

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++       TY + I G CK    + A R++  M ++G+  D   YN +    C++G
Sbjct: 429 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V+Y  L+ G  + G  D A  + E +  + C ADS T+ 
Sbjct: 489 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYS 545

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL+  LCK   LN+A+ IL+++   G                 EG+   A S+ N M   
Sbjct: 546 VLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 605

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    ++ + +  ++E A  L  EM R G +P VV+YN  ING   +     A
Sbjct: 606 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665

Query: 453 YSFVKEMLE--------------------------------------------------- 461
           +S +K M++                                                   
Sbjct: 666 FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVK 725

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G  P  +TYS +I G C++ +++ A  L      K  +P+  +Y +LI   C       
Sbjct: 726 HGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGK 785

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE-ERLRPDIISYNITL 580
           A+   ++M +    P+L +Y+ L+ GL   GD DKA  ++  +L  E    + +++ I  
Sbjct: 786 AVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILN 845

Query: 581 KGLCS------CSRMSDAFE 594
            GL        CS++  A E
Sbjct: 846 DGLLKAGHVDFCSQLLSAME 865



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 171/352 (48%), Gaps = 19/352 (5%)

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G +++   L  +M   GC  N  SY ILI+GL E   V EA+ +  ++ +  C+ +  T
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + +LI GLCK G ++ A ++L E+   G                  GR+ DA  +   M+
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           ++GC  + +T N L+ G     K + A  L  +   +G +PTV+++  +ING CK ER  
Sbjct: 258 RNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A      ML    K D+  Y +LIN L +  +   A +   +    G  P+V +Y  +I
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C  GKV  AL+++  M+   C PN  TY++L+ GL +     KA+ +   + E+ + 
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P +I+Y   ++G C      +AF         G+ P    +++L  A+  +G
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 240/472 (50%), Gaps = 25/472 (5%)

Query: 119 AKRFL-NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           A RFL +SL      PD  ++ T+++ L ++GDL G   +F  M +  V  NVV Y IL+
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILV 179

Query: 178 DGFFKKGDYMRAKEIWERLV-METSVYPNVVTYNVMINGLCKCGRFDECLE-MWDRMKKN 235
            G  K G    A  + + +   E+ V P+VV  N +++GLCK GR  + ++ + +RM+  
Sbjct: 180 KGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSV 239

Query: 236 ER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                ++ TY    H  C+AGNV  A  +  +M +  +  +AVT N ++ G C  G++  
Sbjct: 240 HGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGA 299

Query: 295 CFELW---EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
             E +     +  +   N V+Y+ L+   L    V  A+ ++  + ++  + D+  +  +
Sbjct: 300 ALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTM 359

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+GL +                   GRL DA S+   M K G +L+A   N L+ GF + 
Sbjct: 360 ISGLTQ------------------AGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRR 401

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +L  A  L  EM   G  P V +YNTL++GLCK   F      + +M++ G +P ++T+
Sbjct: 402 KRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTF 461

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
             LI+G C+  +ID AL++     + G  P+  +YN LI  LC +     A++L+  M++
Sbjct: 462 GTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMRE 521

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++   N+ T+N L+ GL      +KA E+ + + E R  PD ++ +I ++ L
Sbjct: 522 KHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWL 573



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 199/420 (47%), Gaps = 21/420 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+   +N +++ L + G      +++  M+      +  TY   + GLCKAG V  A  V
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 264 YREM--VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GCL-NVVSYNILIR 318
              M   ES +  D V  N ++DG C+ G++++  +  E   R   GC  N V+YN L  
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
                G V  A  +   + ++    ++ T   ++ GLC  G +  A++   E        
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE-------- 306

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                    R      + NA T ++L+  F+  + +  A+ LF EM  +G SP  + Y T
Sbjct: 307 --------KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+GL +  R  +A+S    M + G++ D   Y++LI G C+ K+++ A +L  +  + G
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PDV  YN L+ GLC AG      +L   M    C P++VT+ TL+ G  K G  D+AL
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEAL 478

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            I+  + E  ++P+ + YN  +  LC     S A E  ++   + +     T++ L++ +
Sbjct: 479 RIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGL 538



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 180/365 (49%), Gaps = 28/365 (7%)

Query: 260 AERVYREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNIL 316
           A R  R+ + +G    D   +N ++D   +AG +    +L+  M R   +  NVV+Y IL
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASM-RDASVRPNVVTYGIL 178

Query: 317 IRGLLENGKVDEAISIWELLR--EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ++GL + G+V +A+S+ + +   E +   D      +++GLCK G L +A++ + E    
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE---- 234

Query: 375 GEGRLADAASLVNRMDK-HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                        RM   HGC  N  T N L + F +A  +  A  L  +M ++  +P  
Sbjct: 235 -------------RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNA 281

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGW---KPDMITYSLLINGLCQSKKIDMALKL 490
           V+ NT++ GLC V R G A  F +E     W   + + +TYS L+     +  + +A++L
Sbjct: 282 VTLNTIVGGLCWVGRVGAALEFFREK-RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + + +G +PD  MY  +I GL  AG+++DA  + ++MKK     +   YN L+ G  +
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCR 400

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               ++A E+   + E  L+PD+ +YN  L GLC         E L   +  G  P+ +T
Sbjct: 401 RKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVT 460

Query: 611 WHILV 615
           +  L+
Sbjct: 461 FGTLI 465



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 172/387 (44%), Gaps = 33/387 (8%)

Query: 71  CPEDVALS-VIQAYGKNSMPDKALD-VFQRMNEIFGCE---------AGILCRKRQFEKA 119
           CP+ V L+ ++    K     +A+  V +RM  + GC          A   CR      A
Sbjct: 206 CPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMA 265

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET--NVVCYNILI 177
              +  + ++ + P+  +  T++ GL   G +  AL  F E      E   N V Y+ L+
Sbjct: 266 CELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLV 325

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
             F    +   A E++  +V E +  P+ + Y  MI+GL + GR D+   M   MKK   
Sbjct: 326 GAFLHTNNVGVAMELFHEMVDEGN-SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGF 384

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D+  Y   I G C+   +  A  +  EM E+G+  D  TYN ++ G C+AG      E
Sbjct: 385 QLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDE 444

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L   M   GC  +VV++  LI G  + G++DEA+ I+  + E     ++  +  LI+ LC
Sbjct: 445 LLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC 504

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K+   + AI++ +E+ E                 KH    N  T N+L+ G    +  E 
Sbjct: 505 KSRDTSLAIELFDEMRE-----------------KH-VPANVTTFNALLKGLRDKNMPEK 546

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGL 443
           A  L   M    C+P  V+ + L+  L
Sbjct: 547 AFELMDLMREGRCTPDYVTIDILMEWL 573



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 2/219 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  + + A     S+ + G + D  +Y  +I G  +   L  A  +  EM E G++ +
Sbjct: 363 LTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPD 422

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN L+ G  K GD++   E+  +++ +    P+VVT+  +I+G CK G+ DE L ++
Sbjct: 423 VYTYNTLLSGLCKAGDFLAVDELLGKMI-DGGCRPSVVTFGTLIHGYCKVGQIDEALRIF 481

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M ++  + ++  Y + I  LCK+ +   A  ++ EM E  +  +  T+NA++ G    
Sbjct: 482 RSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDK 541

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
              ++ FEL ++M    C  + V+ +IL+  L   G+ D
Sbjct: 542 NMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETD 580



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 10/219 (4%)

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +S  + A FL   ++     P   ++NTL++ L +             M +   +P+++T
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174

Query: 471 YSLLINGLCQSKKIDMALKLC--CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           Y +L+ GLC++ ++  AL +       +    PDV M N ++ GLC  G+++ A++    
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE 234

Query: 529 MKK--RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             +    C PN VTYN L     + G+   A E+   + +ER+ P+ ++ N  + GLC  
Sbjct: 235 RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWV 294

Query: 587 SRMSDAFEFLNDALCRGILP----TTITWHILVRAVMNN 621
            R+  A EF  +   R + P      +T+  LV A ++ 
Sbjct: 295 GRVGAALEFFREK--RTVWPEARGNAVTYSTLVGAFLHT 331


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 253/527 (48%), Gaps = 25/527 (4%)

Query: 119 AKRFLNS---LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           A++FL S   +  KG  P V +   V+  L  S  +  A AV++ M E G+   V+ +N 
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           ++D  FK GD  R  +IW  +      +  V TYN++ING  K G+ +E       M+++
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRS 302

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                 +++   I G CK G  + A  V  EM+ +GI+    TYN  I   C  G+I + 
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            EL   M      +VVSYN L+ G ++ GK  EA  +++ LR  + +    T+  LI+GL
Sbjct: 363 RELLSSMA---APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 356 CKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNA 398
           C++G L  A ++  E+                      G L+ A  + + M + G K + 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           Y   +   G ++    + A  L +EM +    +P +  YN  I+GLCKV    +A  F +
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           ++   G  PD +TY+ +I G  ++ +  MA  L  + L+K   P V  Y +LI+G   AG
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           ++E A Q  + MKKR   PN++T+N L+ G+ K G+ D+A      + EE + P+  SY 
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + +   C   +  +  +   + L + I P   T   L + +  +  S
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 25/438 (5%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+A+RF   +   G     YS+  +I G  K G    A  V DEM   G+      YN
Sbjct: 288 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 347

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I I      G    A+E+     + +   P+VV+YN +++G  K G+F E   ++D ++ 
Sbjct: 348 IYICALCDFGRIDDAREL-----LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 402

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
            +      TY + I GLC++GN+EGA+R+  EM    IF D +TY  ++ GF + G +  
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA-DSTTHGVLI 352
             E+++ M RKG   +  +Y     G L  G  D+A  + E +   + +A D T + V I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLCK G L KAI+   ++                   + G   +  T  +++ G+++  
Sbjct: 523 DGLCKVGNLVKAIEFQRKIF------------------RVGLVPDHVTYTTVIRGYLENG 564

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           + + A  L+ EM RK   P+V++Y  LI G  K  R  +A+ +  EM ++G +P+++T++
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L+ G+C++  ID A +  C+  ++G  P+   Y +LI   C   K E+ ++LY  M  +
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684

Query: 533 NCVPNLVTYNTLMDGLFK 550
              P+  T+  L   L K
Sbjct: 685 EIEPDGYTHRALFKHLEK 702



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 257/532 (48%), Gaps = 40/532 (7%)

Query: 83  YGKNSMPDKALDVFQRM------NEIFGCEA--GILCRKRQFEKAKRFLNSLWEKGLKPD 134
           Y K SM +K L  F++M        +  C     +L   R   KA     ++ E G+ P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V ++ T+++   K+GDL     ++ EM  R +E + V YNILI+GF K G    A+    
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 195 RLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
            +     +V P   ++N +I G CK G FD+   + D M        + TY  +I  LC 
Sbjct: 298 DMRRSGFAVTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VV 311
            G ++ A    RE++ S    D V+YN ++ G+ + GK  E   L++ + R G ++  +V
Sbjct: 356 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIV 410

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN LI GL E+G ++ A  + E +  +    D  T+  L+ G  KNG L+ A ++ +E+
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470

Query: 372 ------EEG--------GEGRLAD---AASLVNRM---DKHGCKLNAYTCNSLMNGFIQA 411
                  +G        GE RL D   A  L   M   D H   L  Y  N  ++G  + 
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY--NVRIDGLCKV 528

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L  AI   +++ R G  P  V+Y T+I G  +  +F  A +   EML K   P +ITY
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            +LI G  ++ +++ A +   +  ++G  P+V  +N L++G+C AG +++A +    M++
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
               PN  +Y  L+         ++ ++++  +L++ + PD  ++    K L
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 271/561 (48%), Gaps = 47/561 (8%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D+   V+QA+ K + P   L+V+     + G      C + + ++A+   + +  +G+ P
Sbjct: 282 DLGYEVLQAFRKGNAP---LEVYAYTAVVRG-----FCNEMKLDEAQGVFDDMERQGVVP 333

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           DVY Y ++I+G  KS +LL ALA+ DEM  RGV+TN V  + ++    + G  +   + +
Sbjct: 334 DVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQF 393

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           + L  E+ ++ + V YN++ + LC  G+ ++ +EM + MK      D   Y + I+G C 
Sbjct: 394 KEL-KESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCL 452

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            G++  A  +++EM E G+  D VTYN +  G  R G  +E  +L + M  +G   N  +
Sbjct: 453 QGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTT 512

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           + ++I GL   GKV EA   +  L +KN       +  ++NG C+   + K+ ++   ++
Sbjct: 513 HKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETDLVKKSYEVF--LK 566

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              +G +A  AS                C  L++       +E A+ L   M      P+
Sbjct: 567 LLNQGDMAKKAS----------------CFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPS 610

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            + Y+ ++  LC+      A +     + +G+ PD++TY+++IN  C+   +  A  L  
Sbjct: 611 KIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQ 670

Query: 493 QFLQKGFTPDVTMYNILIHG---------LCSAGKVEDALQLY-----SNMKKRNCVPNL 538
              ++G  PDV  + +L+ G           S GK      LY      +M++    P++
Sbjct: 671 DMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGK-RKTTSLYVSTILRDMEQMKINPDV 729

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           V Y  LMDG  KT +  +A+ +++ ++E  L PD I+Y   + GLC+   +  A   LN+
Sbjct: 730 VCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNE 789

Query: 599 ALCRGILPTTITWHILVRAVM 619
              +G+ P       L R ++
Sbjct: 790 MSSKGMTPDVHIISALKRGII 810



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 51/466 (10%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+V+T N + N L + G  D+ L +++++K+     + +TY   I  LCK G+++   
Sbjct: 191 ILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPL 250

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--CLNVVSYNILIRG 319
            V+ EM   G+   +  + A I+G C   +    +E+ +   RKG   L V +Y  ++RG
Sbjct: 251 CVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAF-RKGNAPLEVYAYTAVVRG 309

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE------ 373
                K+DEA  +++ +  +    D   +  LI+G CK+  L +A+ + +E+        
Sbjct: 310 FCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTN 369

Query: 374 -----------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                      G  G   +       + + G  L+    N + +      K+E+A+ + +
Sbjct: 370 CVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVE 429

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EM  K     V  Y TLING C       A++  KEM EKG KPD++TY++L  GL ++ 
Sbjct: 430 EMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNG 489

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA-----------LQLYSNMKK 531
                +KL      +G  P+ T + ++I GLCS GKV +A           +++YS M  
Sbjct: 490 HARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVN 549

Query: 532 RNCVPNLV--TYNT------------------LMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  +LV  +Y                    L+  L  TGD +KA+++ + +L   + P
Sbjct: 550 GYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEP 609

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             I Y+  L  LC    M +A    +  + RG  P  +T+ I++ +
Sbjct: 610 SKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINS 655



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 162/347 (46%), Gaps = 53/347 (15%)

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           R+G L +V++ N L   L+E+G+VD+A++++E L+      +  T+ ++I  LCK G L 
Sbjct: 188 RRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLK 247

Query: 363 KAIQILNEVEEGG------------EGRLADAAS-----LVNRMDKHGCKLNAYTCNSLM 405
           + + +  E+E  G            EG   +  S     ++    K    L  Y   +++
Sbjct: 248 QPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVV 307

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            GF    KL+ A  +F +M R+G  P V  Y++LI+G CK      A +   EM+ +G K
Sbjct: 308 RGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVK 367

Query: 466 P-----------------------------------DMITYSLLINGLCQSKKIDMALKL 490
                                               D + Y+++ + LC   K++ A+++
Sbjct: 368 TNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEM 427

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +   K    DV  Y  LI+G C  G +  A  ++  MK++   P++VTYN L  GL +
Sbjct: 428 VEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR 487

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            G   + +++ + +  + ++P+  ++ + ++GLCS  ++ +A  + N
Sbjct: 488 NGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFN 534



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 55/349 (15%)

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++N  ++  +     D+AI      R +    D  T   L N L ++G ++KA+ +  ++
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           +                  + G   N YT   ++    +   L+  + +F+EM R G  P
Sbjct: 222 K------------------RFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIP 263

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP-DMITYSLLINGLCQSKKIDMALKL 490
               +   I GLC   R    Y  V +   KG  P ++  Y+ ++ G C   K+D A  +
Sbjct: 264 HSYCFAAYIEGLCNNHRSDLGYE-VLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGV 322

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR----NCVP---------- 536
                ++G  PDV +Y+ LIHG C +  +  AL L+  M  R    NCV           
Sbjct: 323 FDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGE 382

Query: 537 ---------------------NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
                                + V YN + D L   G  + A+E+   +  +RL  D+  
Sbjct: 383 MGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKH 442

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           Y   + G C    +  AF    +   +G+ P  +T+++L   +  NG +
Sbjct: 443 YTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHA 491



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 8/214 (3%)

Query: 397 NAYTCNSLMNGFIQA----SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           N Y      NGF++     +  + AI    +  R+G  P V++ N L N L +     +A
Sbjct: 155 NNYFLLRAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKA 214

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC--QFLQKGFTPDVTMYNILI 510
            +  +++   G+ P+  TY+++I  LC  KK D+   LC   +  + G  P    +   I
Sbjct: 215 LAVYEQLKRFGFIPNCYTYAIVIKALC--KKGDLKQPLCVFEEMERVGVIPHSYCFAAYI 272

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            GLC+  + +   ++    +K N    +  Y  ++ G       D+A  +++ +  + + 
Sbjct: 273 EGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVV 332

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           PD+  Y+  + G C    +  A    ++ + RG+
Sbjct: 333 PDVYVYSSLIHGYCKSHNLLRALALHDEMISRGV 366


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 292/635 (45%), Gaps = 78/635 (12%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           ++F+ +LR+ + P +  + +                    +I  Y +N   D+A  V   
Sbjct: 355 YIFNQMLRQSLKPSVATYTA--------------------LIDGYCRNGRTDEARRVLYE 394

Query: 99  MNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN-GLV----------- 146
           M +I G       R R+  KAK+ L  +   G+ PDV +Y  +IN G++           
Sbjct: 395 M-QITGV------RPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMS 447

Query: 147 -------------------KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
                              + G++L A +V+D M   G   ++  Y  L+ G  + G  +
Sbjct: 448 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 507

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +AKE    L +E +   +  T N ++ G+CK G  DE L++ ++M       D++TY   
Sbjct: 508 QAKEFMVYL-LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 566

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKG 306
           + G CK G V  A  + + M+E G+  D + Y  +++G    G++K   +   E++ ++G
Sbjct: 567 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              + ++YN ++ G L+ G+++E   +   + E      S ++ +L++G  K G L++ +
Sbjct: 627 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 686

Query: 366 QILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +  + V+EG +                G +  A   + +M   G   +    + L+  F
Sbjct: 687 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 746

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + SK+ NA+ LF  M     SP+  +Y  ++NGL +     ++Y  + +M+E G +P  
Sbjct: 747 SEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKH 806

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y  LIN  C+   ID A +L       G  P     + ++ GLC  GKVE+A+ ++S+
Sbjct: 807 THYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 866

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           + +   VP + T+ TLM GL K    D A  +   +    L+ D+++YN+ + GLC+   
Sbjct: 867 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKC 926

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + DA +   +   +G+LP   T+  L  A+   G 
Sbjct: 927 ICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 961



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 285/605 (47%), Gaps = 55/605 (9%)

Query: 63  LIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCR 112
           L +++ C  P  V   +++  Y K      AL +   M E  G EA +         LC+
Sbjct: 253 LQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDM-EKNGIEADLYTYNIMIDKLCK 311

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
            ++  +A   L  + E  L PD  SY T+I+G    G +  A+ +F++M  + ++ +V  
Sbjct: 312 LKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVAT 371

Query: 173 YNILIDGFFKKG--------------------DYMRAKEIWERLVMETSVYPNVVTYNVM 212
           Y  LIDG+ + G                    +  +AK+I  + ++   + P+V+TY+ +
Sbjct: 372 YTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL-KCMLADGIDPDVITYSAL 430

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           IN     G   E  +    M + +   D  ++   I   C+ GNV  A  VY  MV  G 
Sbjct: 431 INE----GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGW 486

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             D  TY +++ G C+ G + +  E    +  K C ++  + N L+ G+ ++G +DEA+ 
Sbjct: 487 PPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALD 546

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           + E +  +N   D+ T+ +L++G CK G +  A+ +L  + E G                
Sbjct: 547 LCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV 606

Query: 376 -EGRLADAASLVNRMD-KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            EG++  A+ +   +  K G   +    NS+MNG+++  ++     L + M      P+ 
Sbjct: 607 NEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSS 666

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            SYN L++G  K  +        ++M+++G KPD +TY LLI GLC+   I++A+K   +
Sbjct: 667 ASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEK 726

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            + +G  PD   ++ILI       K+ +ALQL+S MK  +  P+  TY  +++GL +   
Sbjct: 727 MVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNW 786

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             ++ EI + ++E  L+P    Y   +   C    +  AFE   D    G++P+ +    
Sbjct: 787 LQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESS 846

Query: 614 LVRAV 618
           +VR +
Sbjct: 847 IVRGL 851



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 263/554 (47%), Gaps = 44/554 (7%)

Query: 85  KNSMPDKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           +  MP +A+ V + +    F C A      R   +               +++S   ++N
Sbjct: 120 QAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCD-----------PTNLFSVDLLVN 168

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF--FKKGDYMRAKEIWERLVMETS 201
             VK G +L A A    M E G + ++   N +++      K +Y     +W  L ++ S
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEY-----VW--LFLKES 221

Query: 202 V---YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +   +P +V T N+++N LC  G+  +   M  +MK N R  ++ TY + ++   K G  
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKKGRC 280

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV----SY 313
           + A R+  +M ++GI  D  TYN MID  C   K+K     + ++ R   +N+     SY
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLC---KLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI G    GK++ AI I+  +  ++      T+  LI+G C+NG  ++A ++L E++ 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 374 GG--EGRLADAASLVNRMDKHGCKLNAYTCNSLMN-GFIQASKLENAIFLFKE-MSRKGC 429
            G     ++ A  ++  M   G   +  T ++L+N G I  ++       FK+ MSR   
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQ------FKQYMSRMKI 451

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           S  V S+N +I+  C+     EA+S    M+  GW PD+ TY  L+ GLCQ   +  A +
Sbjct: 452 SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE 511

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                L+K    D    N L+ G+C  G +++AL L   M  RN +P+  TY  L+DG  
Sbjct: 512 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 571

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTT 608
           K G    AL +   +LE+ L PD I+Y   L GL +  ++  A     + +C+ G+    
Sbjct: 572 KRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADC 631

Query: 609 ITWHILVRAVMNNG 622
           I ++ ++   +  G
Sbjct: 632 IAYNSMMNGYLKGG 645



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 10/244 (4%)

Query: 72  PEDVALSV-IQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRF 122
           P+++A  + I+A+ + S    AL +F  M        ++ +      L RK   +++   
Sbjct: 734 PDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEI 793

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + E GL+P    Y  +IN   + GD+ GA  + ++M   GV  + V  + ++ G  K
Sbjct: 794 LHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 853

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A  ++   +M   + P + T+  +++GLCK  + D+   +   M+    + D  
Sbjct: 854 CGKVEEAIIVFSS-IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 912

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   I GLC    +  A  +Y EM   G+  +  TY  +       G +++  +L + +
Sbjct: 913 TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 972

Query: 303 GRKG 306
             +G
Sbjct: 973 EDRG 976


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 172/622 (27%), Positives = 290/622 (46%), Gaps = 96/622 (15%)

Query: 96  FQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLL 152
           F+   ++F C   +   CR    +KA  F        GL+ +V +Y ++ING    GD+ 
Sbjct: 4   FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVE 63

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
           G   V   M ERGV  NVV Y  LI G+ KKG    A+ ++E L+ E  +  +   Y V+
Sbjct: 64  GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE-LLKEKKLVADQHMYGVL 122

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           ++G C+ G+  + + + D M +     ++    S I+G CK+G +  AE+++  M +  +
Sbjct: 123 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 182

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAIS 331
             D  TYN ++DG+CRAG + E  +L + M +K  +  V++YNIL++G    G   + +S
Sbjct: 183 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 242

Query: 332 IWELLREKNCNAD-----------------------------------STTHGVLINGLC 356
           +W+++ ++  NAD                                   + T  V+I+GLC
Sbjct: 243 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 302

Query: 357 KNGYLNKAIQILNEV---------------EEG--GEGRLADAASLVNRMDKHGCKLNAY 399
           K   +N+A +IL+ V                 G    G L +A ++   M++ G      
Sbjct: 303 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 362

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             N+L++G  +   L     L  E+  +G +PTV +Y  LI G C +    +AY+   EM
Sbjct: 363 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 422

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCC----------------QFLQKGFT--- 500
           +EKG   ++   S + N L +  KID A  L                  +FL+   T   
Sbjct: 423 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 482

Query: 501 -------------------PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN-CVPNLVT 540
                              P+  +YN+ I GLC AGK+EDA +L+S++   +  +P+  T
Sbjct: 483 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 542

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ G    GD +KA  + + +  + + P+I++YN  +KGLC    +  A   L+   
Sbjct: 543 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 602

Query: 601 CRGILPTTITWHILVRAVMNNG 622
            +GI P  IT++ L+  ++ +G
Sbjct: 603 QKGITPNAITYNTLIDGLVKSG 624



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 249/557 (44%), Gaps = 66/557 (11%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I+ Y K  + ++A  VF+ + E        ++G      CR  Q   A R  +++ E 
Sbjct: 86  SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 145

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++ +     ++ING  KSG L+ A  +F  M +  ++ +   YN L+DG+ + G    A
Sbjct: 146 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 205

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++ +++  +  V P V+TYN+++ G  + G F + L +W  M K     D  +  + + 
Sbjct: 206 LKLCDQMC-QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 264

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            L K G+   A +++  ++  G+  D +T N MI G C+  K+ E  E+ + +    C  
Sbjct: 265 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 324

Query: 310 VV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            V +Y  L  G  + G + EA ++ E +  K        +  LI+G  K  +LNK   ++
Sbjct: 325 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLV 384

Query: 369 NEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E+   G                  G +  A +    M + G  LN   C+ + N   + 
Sbjct: 385 IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 444

Query: 412 SKLENAIFL-------------------FKEMSRKGC-------------------SPTV 433
            K++ A  L                   F E S   C                    P  
Sbjct: 445 DKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNN 504

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCC 492
           + YN  I GLCK  +  +A     ++L    + PD  TY++LI+G   +  I+ A  L  
Sbjct: 505 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 564

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +   KG  P++  YN LI GLC  G V+ A +L   + ++   PN +TYNTL+DGL K+G
Sbjct: 565 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 624

Query: 553 DCDKALEIWNHILEERL 569
           +  +A+ +   ++E+ L
Sbjct: 625 NVAEAMRLKEKMIEKGL 641



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 24/352 (6%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECF----ELWEVMGRKGCLNVVSYNILIRGLLE 322
           M+   +  D  T + +++ +CR+G + +      E    +G +  LNVV+YN LI G   
Sbjct: 1   MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLE--LNVVTYNSLINGYAM 58

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G V+    +  L+ E+  + +  T+  LI G CK G + +A  +   ++E         
Sbjct: 59  IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE--------- 109

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             LV     +G          LM+G+ +  ++ +A+ +   M   G        N+LING
Sbjct: 110 KKLVADQHMYGV---------LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 160

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            CK  +  EA      M +   KPD  TY+ L++G C++  +D ALKLC Q  QK   P 
Sbjct: 161 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 220

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  YNIL+ G    G   D L L+  M KR    + ++ +TL++ LFK GD ++A+++W 
Sbjct: 221 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 280

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           ++L   L  D I+ N+ + GLC   ++++A E L++       P   T+  L
Sbjct: 281 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 332



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 39/277 (14%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV- 170
           + R   K    +  L  +GL P V +YG +I G    G +  A A   EM E+G+  NV 
Sbjct: 373 KYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVN 432

Query: 171 -------------------------VCYNILIDGFFKKGDYMRA--------KEIWERLV 197
                                    V +++L+ G+    +++ A        ++I E + 
Sbjct: 433 ICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE 492

Query: 198 METS---VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCK 253
             T    + PN + YNV I GLCK G+ ++  +++  +  ++R   D +TY   IHG   
Sbjct: 493 NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI 552

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
           AG++  A  +  EM   GI  + VTYNA+I G C+ G +     L   + +KG   N ++
Sbjct: 553 AGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 612

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           YN LI GL+++G V EA+ + E + EK     S   G
Sbjct: 613 YNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 649



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 1/228 (0%)

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
           + +TC+ ++N + ++  ++ A+   KE  S  G    VV+YN+LING   +         
Sbjct: 9   DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 68

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           ++ M E+G   +++TY+ LI G C+   ++ A  +     +K    D  MY +L+ G C 
Sbjct: 69  LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 128

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G++ DA++++ NM +     N    N+L++G  K+G   +A +I++ + +  L+PD  +
Sbjct: 129 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 188

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           YN  + G C    + +A +  +    + ++PT +T++IL++     GA
Sbjct: 189 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 236



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N + YN+ I G  K G    A++++  L+      P+  TY ++I+G    G  ++   +
Sbjct: 503 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 562

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M       +  TY + I GLCK GNV+ A+R+  ++ + GI  +A+TYN +IDG  +
Sbjct: 563 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 622

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVD 327
           +G + E   L E M  KG         L+RG  + G VD
Sbjct: 623 SGNVAEAMRLKEKMIEKG---------LVRGSDKQGDVD 652


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 265/548 (48%), Gaps = 36/548 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
           VI  + + + PD A+ ++++M EI         F       C   +   +      L + 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKL 170

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVF----------DEMFERGVETNVVCYNILIDG 179
           G +PDV ++ T+++GL     +  ALA+F          D+M E G+   V+ +N LI+G
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLING 230

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
              +G  + A  +  ++V +  ++ +VVTY  ++NG+CK G     L +  +M++   + 
Sbjct: 231 LCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D   Y + I  LCK G+   A+ ++ EM+E GI  +  TYN MIDGFC  G+  +   L 
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 300 -EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +++ R+   +V+++N LI   ++ GK+ EA  + + +  +    D+ T+  +I G CK+
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 359 GYLNKAIQILNEVEEGG-------------EGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
              + A  + + +                   R+ +   L+  + + G   N  T N+L+
Sbjct: 410 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 469

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +GF +   L  A  LF+EM   G  P  ++ N L+ G C+ E+  EA    + +      
Sbjct: 470 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 529

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D + Y+++I+G+C+  K+D A  L C     G  PDV  YN++I G C    + DA  L
Sbjct: 530 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 589

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  MK     P+  TYNTL+ G  K G+ DK++E+ + +       D  +  + +  L +
Sbjct: 590 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM-VADLIT 648

Query: 586 CSRMSDAF 593
             R+  +F
Sbjct: 649 DGRLDKSF 656



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 239/500 (47%), Gaps = 37/500 (7%)

Query: 154 ALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVVTYNV 211
           A+  FD M   R   T V C N +I  F +      A  ++ +  ME    P N+ ++N+
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRK--MEIRRIPLNIYSFNI 146

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I   C C +    L  + ++ K   + D  T+ + +HGLC    +  A  ++  MVE+G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 272 IFVD----------AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
              D           +T+N +I+G C  G++ E   L   M  KG  ++VV+Y  ++ G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G    A+++   + E +   D   +  +I+ LCK+G+ + A  + +E+ E G     
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GR +DA  L+  M +     +  T N+L++  ++  KL  A  L  E
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +   P  V+YN++I G CK  RF +A    K M +    PD++T++ +I+  C++K+
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKR 442

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D  ++L  +  ++G   + T YN LIHG C    +  A  L+  M      P+ +T N 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+ G  +    ++ALE++  I   ++  D ++YNI + G+C  S++ +A++        G
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 604 ILPTTITWHILVRAVMNNGA 623
           + P   T+++++       A
Sbjct: 563 VEPDVQTYNVMISGFCGKSA 582



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 215/454 (47%), Gaps = 38/454 (8%)

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           +FK  D   A + ++ +V     Y   V  N +I    +  R D  + ++ +M+      
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + +++   I   C    +  +   + ++ + G   D VT+N ++ G C   +I E   L+
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 300 EVMGRKGCL-----------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             M   G L            V+++N LI GL   G+V EA ++   +  K  + D  T+
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           G ++NG+CK G    A+ +L+++EE   +  +   +++++R+ K G              
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG-------------- 305

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                   +A +LF EM  KG +P V +YN +I+G C   R+ +A   +++M+E+   PD
Sbjct: 306 -----HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           ++T++ LI+   +  K+  A KLC + L +   PD   YN +I+G C   + +DA  ++ 
Sbjct: 361 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 420

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M      P++VT+NT++D   +    D+ +++   I    L  +  +YN  + G C   
Sbjct: 421 LMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 476

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            ++ A +   + +  G+ P TIT +IL+     N
Sbjct: 477 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 510


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 253/491 (51%), Gaps = 25/491 (5%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +IN  V+S  L  +++ F+EM ++G      C+N L+        + +    W R  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ----WWRFF 152

Query: 198 METSVYPN--VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            E+ +  +  V ++ ++I G C+ G  ++  ++   +++     +   Y + I G CK G
Sbjct: 153 NESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            +E A+ ++ EM + G+  +  TY  +I G  + G  K+ FE++E M   G   N+ +YN
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            ++    ++G+  +A  +++ +RE+  + +  T+  LI GLC+                 
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR----------------- 315

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            E +  +A  ++++M   G   N  T N+L++GF    KL  A+ L +++  +G SP++V
Sbjct: 316 -EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN L++G CK      A   VKEM E+G KP  ITY++LI+   +   ++ A++L    
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G TPDV  Y++LIHG C  G++ +A +L+  M  +   PN V YNT++ G  K G  
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +AL ++  + E+ L P++ SY   ++ LC   +  +A   +   +  GI P+    +++
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554

Query: 615 VRAVMNNGAST 625
            RA  ++  S+
Sbjct: 555 SRAKNDSHVSS 565



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 204/418 (48%), Gaps = 25/418 (5%)

Query: 93  LDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
           LDV+     I GC     C   + EK+   L  L E G  P+V  Y T+I+G  K G++ 
Sbjct: 161 LDVYSFGIVIKGC-----CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVM 212
            A  +F EM + G+  N   Y +LI G FK G   +  E++E++  E  V+PN+ TYN +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEDGVFPNLYTYNCV 274

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +N  CK GR  +  +++D M++     +  TY + I GLC+      A +V  +M   GI
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAIS 331
             + +TYN +IDGFC  GK+ +   L   +  +G   ++V+YNIL+ G  + G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + + + E+       T+ +LI+   +   + KAIQ+ + +EE                  
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE------------------ 436

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   + +T + L++GF    ++  A  LFK M  K   P  V YNT++ G CK      
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYR 496

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           A    +EM EK   P++ +Y  +I  LC+ +K   A  L  + +  G  P  ++ N++
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 195/404 (48%), Gaps = 17/404 (4%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E  S  Y   I+   ++ +++ +   + EMV+ G    +  +N ++     +    + + 
Sbjct: 91  ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            +     K  L+V S+ I+I+G  E G+++++  +   LRE   + +   +  LI+G CK
Sbjct: 151 FFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCK 210

Query: 358 NGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYT 400
            G + KA  +  E+ + G                  G       +  +M + G   N YT
Sbjct: 211 RGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYT 270

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N +MN   +  + ++A  LF EM  +G S  +V+YNTLI GLC+  +  EA   + +M 
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
             G  P++ITY+ LI+G C   K+  AL LC     +G +P +  YNIL+ G C  G   
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A ++   M++R   P+ +TY  L+D   +  + +KA+++ + + E  L PD+ +Y++ +
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            G C   +M++A       + + + P  + ++ +V      G+S
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 10/265 (3%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           V+  + K+     A  +F  M E         +    G LCR+ +  +A + ++ +   G
Sbjct: 274 VMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG 333

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P++ +Y T+I+G    G L  AL++  ++  RG+  ++V YNIL+ GF KKGD   A 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           ++ + +  E  + P+ +TY ++I+   +    ++ +++   M++     D  TY   IHG
Sbjct: 394 KVVKEM-EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHG 452

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            C  G +  A R+++ MV   +  + V YN M+ G+C+ G       L+  M  K    N
Sbjct: 453 FCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512

Query: 310 VVSYNILIRGLLENGKVDEAISIWE 334
           V SY  +I  L +  K  EA  + E
Sbjct: 513 VASYRYMIEVLCKERKSKEAEGLVE 537


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 253/504 (50%), Gaps = 28/504 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +VI    K  M D+A  VFQ M        N  + C         ++++  + L  +   
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTH 266

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL+PD   Y  +++ L K+G    A  +FD +  +G++ +V  Y IL+ G+  +G     
Sbjct: 267 GLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEM 326

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
               + L++   V P+   +N+M N   K    DE + ++D+M++         Y + I 
Sbjct: 327 HSFLD-LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
            LCK G V+ A   + +M+  G+  D   +++++ G C   K ++  +L+ EV+ +   L
Sbjct: 386 ALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRL 445

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N   +NIL+  L   G+V EA  + +L+   +   D  ++  L++G C  G         
Sbjct: 446 NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTG--------- 496

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R+ +AA L++ M   G K + +T N+L++G+ +A ++++A  LF+EM  KG
Sbjct: 497 ---------RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKG 547

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +P VV+YNT+++GL ++ RF EA      M+    K D+ TY++++NGLC++  +D A 
Sbjct: 548 LTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAF 607

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           K+      K    D+   NI+I  L   G+ EDA+ L++ +     VP++ TY  + + L
Sbjct: 608 KMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENL 667

Query: 549 FKTGDCDKALEIWNHILEERLRPD 572
            K G  ++  E+++ + E    P+
Sbjct: 668 IKEGSLEELDELFSAMEENGTAPN 691



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 250/497 (50%), Gaps = 23/497 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE-TNVVCYNILIDGFFKKGDYMRA 189
           + P   +Y  +I    + G L    A F  + + G    N V +  L+ G         A
Sbjct: 88  VAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA 147

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN---EREKDSFTYCS 246
            +I  R + E     NV++YN+++ GLC   R +E LE+   M  +       +  TY +
Sbjct: 148 TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTT 207

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLCKA  V+ A+ V++ M++ G+  +  TY  +I G+   GK KE  ++ + M   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              + V Y +L+  L +NG+  EA +I++ L  K      T +G+L++G           
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT-------- 319

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     EG L++  S ++ M ++G   + +  N + N + + + ++ A+ +F +M 
Sbjct: 320 ----------EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMR 369

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++  SP VV+Y  LI+ LCK+ R  +A     +M+ +G  PD+  +S L+ GLC   K +
Sbjct: 370 QQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWE 429

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A KL  + L +G   +   +NIL+  LC  G+V +A +L   M + +  P++++YNTL+
Sbjct: 430 KAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLV 489

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DG   TG  D+A ++ + ++   L+PD  +YN  L G C   R+ DA+    + L +G+ 
Sbjct: 490 DGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLT 549

Query: 606 PTTITWHILVRAVMNNG 622
           P  +T++ ++  +   G
Sbjct: 550 PGVVTYNTILHGLFQIG 566



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 249/526 (47%), Gaps = 24/526 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKR-FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           IFG     LC  ++ ++A    L  + E G   +V SY  ++ GL        AL +   
Sbjct: 130 IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHM 189

Query: 161 MFERGVET---NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           M + G  +   NVV Y  +IDG  K     RAK +++ ++ +  V PN  TY  +I+G  
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI-DKGVRPNNHTYTCLIHGYL 248

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
             G++ E ++M   M  +  + D   Y   +  LCK G    A  ++  ++  GI     
Sbjct: 249 STGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVT 308

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
            Y  ++ G+   G + E     ++M R G   +   +NI+     +   +DEA+ I++ +
Sbjct: 309 IYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM 368

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
           R++  +     +G LI+ LCK                   GR+ DA    N+M   G   
Sbjct: 369 RQQWLSPGVVNYGALIDALCK------------------LGRVDDAVLKFNQMINEGVTP 410

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           + +  +SL+ G     K E A  LF E+  +G       +N L+  LC+  R  EA   +
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI 470

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
             ML    +PD+I+Y+ L++G C + +ID A KL    +  G  PD   YN L+HG C A
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
            +++DA  L+  M  +   P +VTYNT++ GLF+ G   +A E++ +++  R + DI +Y
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTY 590

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            I L GLC  + + +AF+       + +     T +I++ A++  G
Sbjct: 591 TIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGG 636



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 265/564 (46%), Gaps = 33/564 (5%)

Query: 90  DKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG---LKPDVYS 137
           D+A D+  R    FGC   +         LC +++ E+A   ++ + + G     P+V +
Sbjct: 145 DEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVT 204

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y TVI+GL K+  +  A  VF  M ++GV  N   Y  LI G+   G +    ++ + + 
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
               + P+ V Y V+++ LCK GR  E   ++D + +   +     Y   +HG    G +
Sbjct: 265 TH-GLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGAL 323

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNI 315
                    MV +G+  D   +N M + + +   I E   +++ M R+  L+  VV+Y  
Sbjct: 324 SEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGA 382

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI  L + G+VD+A+  +  +  +    D      L+ GLC      KA ++  EV + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                            EGR+ +A  L++ M +   + +  + N+L++G     +++ A 
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L   M   G  P   +YNTL++G CK  R  +AYS  +EML KG  P ++TY+ +++GL
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            Q  +   A +L    +      D+  Y I+++GLC    V++A +++ ++  ++   ++
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            T N ++  L K G  + A++++  I    L PD+ +Y +  + L     + +  E  + 
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSA 682

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
               G  P +   + LVR +++ G
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRG 706



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 133/573 (23%), Positives = 242/573 (42%), Gaps = 66/573 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHL--FHHILRRLIDPKLVVHVSR 59
           VIS   LL  L  EK    AL L      +   +H+P++  +  ++  L   ++V     
Sbjct: 164 VISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKG 223

Query: 60  ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
           + + + I K   P +   + +I  Y       + + + Q M+         I+      L
Sbjct: 224 VFQHM-IDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYL 282

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  +  +A+   +SL  KG+KP V  YG +++G    G L    +  D M   GV  + 
Sbjct: 283 CKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDH 342

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +NI+ + + KK     A  I++++  +  + P VV Y  +I+ LCK GR D+ +  ++
Sbjct: 343 HIFNIMFNAYAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M       D F + S ++GLC     E AE+++ E+++ GI ++A  +N ++   CR G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ E   L ++M R     +V+SYN L+ G    G++DEA  + +++       D  T+ 
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRM--D 390
            L++G CK   ++ A  +  E+   G                  GR  +A  L   M  +
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581

Query: 391 KHGC---------------------------------KLNAYTCNSLMNGFIQASKLENA 417
           +  C                                 +L+ +T N ++   ++  + E+A
Sbjct: 582 RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF  +S  G  P V +Y  +   L K     E       M E G  P+    + L+  
Sbjct: 642 MDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           L     I  A     +  +K F+ + +  ++LI
Sbjct: 702 LLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + ++A + L+ +   GLKPD ++Y T+++G  K+  +  A ++F EM  +G+   V
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN ++ G F+ G +  AKE++  ++       ++ TY +++NGLC+    DE  +M+ 
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMI-NNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +   + + D FT    I  L K G  E A  ++  +   G+  D  TY  + +   + G
Sbjct: 612 SLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEG 671

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++E  EL+  M   G   N    N L+R LL  G +  A      L EKN + +++T  
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTS 731

Query: 350 VLINGLCKNGY 360
           +LI+   +  Y
Sbjct: 732 MLISIYSRAEY 742



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 13/259 (5%)

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA---SKLENAIFLFKEMSRKGCS----P 431
           L DA  L + M  +    +  T N L+    +A   S  E  + LF  M R+ CS    P
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRE-CSVKVAP 90

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK-PDMITYSLLINGLCQSKKIDMALKL 490
           +  +Y  LI   C++ R    ++    +L+ GW   + + +  L+ GLC +K++D A  +
Sbjct: 91  SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150

Query: 491 CCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR---NCVPNLVTYNTLMD 546
             + + + G T +V  YNIL+ GLC+  + E+AL+L   M      +  PN+VTY T++D
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K    D+A  ++ H++++ +RP+  +Y   + G  S  +  +  + L +    G+ P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 607 TTITWHILVRAVMNNGAST 625
             + + +L+  +  NG  T
Sbjct: 271 DCVIYAVLLDYLCKNGRCT 289


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 242/477 (50%), Gaps = 24/477 (5%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F     + C  R+ ++A +    + EKG+ P + +   +++  +K   +  A  ++ EM
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCG 220
           F   + + V  +NI+++   K+G   +A+E      ME   + PNVV+YN +I+G    G
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG--FMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +    + D M+    E DS+TY S I G+CK G +E A  ++ +MVE G+  +AVTYN
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREK 339
            +IDG+C  G ++  F   + M +KG +  VS YN+L+  L   G++ EA  + + +R+K
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ T+ +LING  + G   KA  + NE+   G                   R+ +A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L  ++   G   +    N++++G      +E A  L KEM RK   P  V++NTL+ G
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+  +  EA   + EM  +G KPD I+Y+ LI+G  +   I  A ++  + L  GF P 
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           +  YN LI  LC   + + A +L   M  +   P+  TY +L++G+   G+ D  +E
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTLVE 630



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 233/471 (49%), Gaps = 26/471 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE---RLVMETSVYPNVVTYN 210
           A   F  M E+G+   +   N ++  F K      A  ++    RL + ++VY    T+N
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVY----TFN 231

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           +M+N LCK G+  +  E    M+    + +  +Y + IHG    GN+EGA R+   M   
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  D+ TY ++I G C+ G+++E   L++ M   G + N V+YN LI G    G ++ A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            S  + + +K      +T+ +L++ L                    EGR+ +A  ++  M
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFM------------------EGRMGEADDMIKEM 393

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K G   +A T N L+NG+ +    + A  L  EM  KG  PT V+Y +LI  L +  R 
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA    +++L++G  PD+I ++ +++G C +  ++ A  L  +  +K   PD   +N L
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + G C  GKVE+A  L   MK+R   P+ ++YNTL+ G  + GD   A  + + +L    
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            P +++YN  +K LC       A E L + + +GI P   T+  L+  + N
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 624



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 225/471 (47%), Gaps = 58/471 (12%)

Query: 190 KEIWERLVMET---SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           +E+++ L +     SV  ++V +++++   C+  R DE  + +  MK+        T   
Sbjct: 139 RELFDELTLSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCND 197

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            +    K   +E A  +Y EM    I     T+N M++  C+ GK+K+  E    M   G
Sbjct: 198 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 257

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NVVSYN +I G    G ++ A  I + +R K    DS T+G LI+G+CK        
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK-------- 309

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     EGRL +A+ L ++M + G   NA T N+L++G+     LE A     EM 
Sbjct: 310 ----------EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING-------- 477
           +KG  P+V +YN L++ L    R GEA   +KEM +KG  PD ITY++LING        
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 419

Query: 478 ---------------------------LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
                                      L +  ++  A  L  + L +G +PDV M+N ++
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C+ G VE A  L   M +++  P+ VT+NTLM G  + G  ++A  + + +    ++
Sbjct: 480 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 539

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           PD ISYN  + G      + DAF   ++ L  G  PT +T++ L++ +  N
Sbjct: 540 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 172/348 (49%), Gaps = 19/348 (5%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
           ++ ++ ++   C   +  E F+ + +M  KG +  + + N ++   L+  +++ A  ++ 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +     ++   T  +++N LCK                  EG+L  A   +  M+  G 
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCK------------------EGKLKKAREFIGFMEGLGF 258

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K N  + N++++G+     +E A  +   M  KG  P   +Y +LI+G+CK  R  EA  
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 318

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              +M+E G  P+ +TY+ LI+G C    ++ A     + ++KG  P V+ YN+L+H L 
Sbjct: 319 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 378

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G++ +A  +   M+K+  +P+ +TYN L++G  + G+  KA ++ N +L + + P  +
Sbjct: 379 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +Y   +  L   +RM +A +     L +G+ P  I ++ +V     NG
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 257/531 (48%), Gaps = 20/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +CR    + A + +    E G  P   +Y  VI   V+ G+   AL + DEM +  V  N
Sbjct: 267 VCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVN 326

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V     LI G+  +GD   A  +++ +V E  V PNV  ++V+I    K G  ++  E++
Sbjct: 327 VAVATSLIKGYCVRGDVNSALRLFDEVV-EVGVTPNVAIFSVLIEWCSKIGNVEKANELY 385

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RMK    +   F     + G  K   +E A  +    VE+GI    VTYN ++   C  
Sbjct: 386 TRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCEL 444

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ E   LW+ M  KG   ++VSYN +I G  + G +D+A  +   + E     ++ T+
Sbjct: 445 GKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITY 504

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            +L+ G  K G    A  + +++   G                  GR+++A   +N   K
Sbjct: 505 TILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIK 564

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                 + T N +++G+++   +++A  +++EM R   SP V++Y +LING CK  +   
Sbjct: 565 QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDL 624

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A     +M  KG + D+  Y+ LI G C+ + ++ A K   + L+ G TP+  +YNI+I 
Sbjct: 625 ALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMIS 684

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
              +   +E AL L+  M       +L  Y +L+DGL K G    AL++++ +L   + P
Sbjct: 685 AYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVP 744

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           DI  YN+ + GLC+  ++ +A + L +     I PT + ++ L+      G
Sbjct: 745 DIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEG 795



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 260/517 (50%), Gaps = 29/517 (5%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSL 126
           VA S+I+ Y      + AL +F  + E        IF        +    EKA      +
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
              GL+P V+    ++ G  K   L  A  + D   E G+ + VV YNI++    + G  
Sbjct: 389 KCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIAS-VVTYNIVLLWLCELGKV 447

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  +W++++ +  + P++V+YN MI G CK G  D+  E+ + + ++  + ++ TY  
Sbjct: 448 NEACNLWDKMIGK-GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTI 506

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            + G  K G+ E A  ++ +MV +GI     T+N++I+G C+ G++ E  +      ++ 
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS 566

Query: 307 CLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            +   ++YN +I G ++ G +D A S++  +     + +  T+  LING CK+  ++ A+
Sbjct: 567 FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLAL 626

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++ ++                  M + G +L+     +L+ GF +   +ENA   F ++ 
Sbjct: 627 KMHDD------------------MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G +P  + YN +I+    +     A +  KEM+      D+  Y+ LI+GL +  K+ 
Sbjct: 669 EVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLS 728

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL L  + L +G  PD+ MYN+LI+GLC+ G++E+A ++   M   N  P ++ YNTL+
Sbjct: 729 FALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLI 788

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            G FK G+  +A  + + +L++ L PD  +Y+I + G
Sbjct: 789 AGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 257/565 (45%), Gaps = 53/565 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + R+   E A R  + + E+ +  D Y+   ++   +K G  + A   F +   RG++ +
Sbjct: 197 MIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLD 256

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+I+I    +  D   A ++ E    E    P+  TY  +I    + G F E L + 
Sbjct: 257 AASYSIVIQAVCRGSDLDLASKLVEG-DEELGWVPSEGTYAAVIGACVRLGNFGEALRLK 315

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M  +    +     S I G C  G+V  A R++ E+VE G+  +   ++ +I+   + 
Sbjct: 316 DEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKI 375

Query: 290 GKIKECFELWEVMG-----------------------------------RKGCLNVVSYN 314
           G +++  EL+  M                                      G  +VV+YN
Sbjct: 376 GNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYN 435

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           I++  L E GKV+EA ++W+ +  K       ++  +I G CK G ++ A +++N + E 
Sbjct: 436 IVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIES 495

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 +G    A ++ ++M   G     YT NS++NG  +  ++  A
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEA 555

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
                   ++   PT ++YN +I+G  K      A S  +EM      P++ITY+ LING
Sbjct: 556 RDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLING 615

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+S K+D+ALK+     +KG   D+T+Y  LI G C    +E+A + +S + +    PN
Sbjct: 616 FCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPN 675

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            + YN ++       + + AL +   ++  ++  D+  Y   + GL    ++S A +  +
Sbjct: 676 TIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYS 735

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           + LCRGI+P    +++L+  + N+G
Sbjct: 736 EMLCRGIVPDIFMYNVLINGLCNHG 760



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 205/444 (46%), Gaps = 25/444 (5%)

Query: 186 YMRAKEIWE-----RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           Y+RA +I E     R ++E  V P V   NV++  + +    ++   ++D M +     D
Sbjct: 162 YVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGD 221

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +T    +    K G    AER + +    G+ +DA +Y+ +I   CR   +    +L E
Sbjct: 222 CYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVE 281

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
                G + +  +Y  +I   +  G   EA+ + + + +     +      LI G C  G
Sbjct: 282 GDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRG 341

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +N A+++ +EV E                   G   N    + L+    +   +E A  
Sbjct: 342 DVNSALRLFDEVVE------------------VGVTPNVAIFSVLIEWCSKIGNVEKANE 383

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L+  M   G  PTV   N L+ G  K      AY  +   +E G    ++TY++++  LC
Sbjct: 384 LYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLC 442

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  K++ A  L  + + KG TP +  YN +I G C  G ++DA ++ + + +    PN +
Sbjct: 443 ELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI 502

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY  LM+G FK GDC+ A  +++ ++   + P   ++N  + GLC   R+S+A + LN  
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 600 LCRGILPTTITWHILVRAVMNNGA 623
           + +  +PT++T++ ++   +  GA
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGA 586



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 106/233 (45%), Gaps = 1/233 (0%)

Query: 385 LVNRMDKHGCKL-NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           LV   +++G KL ++   N L+  +++A+K+  A+  F+ M   G  P V   N L+  +
Sbjct: 138 LVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAM 197

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            +     +A+    EM E+    D  T  +L+    +  K   A +   Q   +G   D 
Sbjct: 198 IRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDA 257

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y+I+I  +C    ++ A +L    ++   VP+  TY  ++    + G+  +AL + + 
Sbjct: 258 ASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDE 317

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           +++ R+  ++      +KG C    ++ A    ++ +  G+ P    + +L+ 
Sbjct: 318 MVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIE 370



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 9/183 (4%)

Query: 449 FGEAYSFVKEMLE--------KGWK-PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           FG++    K ++E         G+K  D   ++ L+    ++ KI  A++     L+ G 
Sbjct: 124 FGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGV 183

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            P V   N+L+  +     VEDA +L+  M +R    +  T   LM    K G   +A  
Sbjct: 184 VPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAER 243

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            +       L+ D  SY+I ++ +C  S +  A + +      G +P+  T+  ++ A +
Sbjct: 244 YFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACV 303

Query: 620 NNG 622
             G
Sbjct: 304 RLG 306


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 232/468 (49%), Gaps = 22/468 (4%)

Query: 154  ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVM 212
            A+ VF E  E GV  NV  YNI+I    + G    A  +   L+ME   Y P+V++Y+ +
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL--LLMELKGYTPDVISYSTV 730

Query: 213  INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
            +NG C+ G  D+  ++ + MK+   + +S+ Y S I  LC+   +  AE  + EM+  GI
Sbjct: 731  VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790

Query: 273  FVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
              D V Y  +IDGFC+ G I+   +  +E+  R    +V++Y  +I G  + G + EA  
Sbjct: 791  LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850

Query: 332  IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
            ++  +  K    DS T   LING CK G++                   DA  + N M +
Sbjct: 851  LFHEMFCKGLEPDSVTFTELINGYCKAGHMK------------------DAFRVHNHMIQ 892

Query: 392  HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             GC  N  T  +L++G  +   L++A  L  EM + G  P + +YN+++NGLCK     E
Sbjct: 893  AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            A   V E    G   D +TY+ L++  C+S ++D A ++  + L KG  P +  +N+L++
Sbjct: 953  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            G C  G +ED  +L + M  +   PN  T+N+L+       +   A  I+  +    + P
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 1072

Query: 572  DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            D  +Y   +KG C    M +A+    +   +G   +  T+ +L++  +
Sbjct: 1073 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 1120



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 233/466 (50%), Gaps = 25/466 (5%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            CR  + +K  + +  +  KGLKP+ Y YG++I  L +   L  A   F EM  +G+  + 
Sbjct: 735  CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            V Y  LIDGF K+GD   A + +  +     + P+V+TY  +I+G C+ G   E  +++ 
Sbjct: 795  VVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             M     E DS T+   I+G CKAG+++ A RV+  M+++G   + VTY  +IDG C+ G
Sbjct: 854  EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913

Query: 291  KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
             +    EL   M + G   N+ +YN ++ GL ++G ++EA+ +         NAD+ T+ 
Sbjct: 914  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             L++  CK+G ++KA +IL E                  M   G +    T N LMNGF 
Sbjct: 974  TLMDAYCKSGEMDKAQEILKE------------------MLGKGLQPTIVTFNVLMNGFC 1015

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
                LE+   L   M  KG +P   ++N+L+   C       A +  K+M  +G  PD  
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075

Query: 470  TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            TY  L+ G C+++ +  A  L  +   KGF+  V+ Y++LI G     K  +A +++  M
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALE-----IWNHILEERLR 570
            ++     +   ++   D  +K    D  ++     I N++++E+LR
Sbjct: 1136 RREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 1181



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 230/489 (47%), Gaps = 21/489 (4%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G  P V+        LV  G L  A  VF++M   G+  +V   N+ +    K       
Sbjct: 615  GSDPRVFD--VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              I  R   E  V  NV +YN++I+ +C+ GR  E   +   M+      D  +Y + ++
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            G C+ G ++   ++   M   G+  ++  Y ++I   CR  K+ E  E +  M R+G L 
Sbjct: 733  GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            + V Y  LI G  + G +  A   +  +  ++   D  T+  +I+G C         QI 
Sbjct: 793  DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC---------QI- 842

Query: 369  NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    G + +A  L + M   G + ++ T   L+NG+ +A  +++A  +   M + G
Sbjct: 843  --------GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            CSP VV+Y TLI+GLCK      A   + EM + G +P++ TY+ ++NGLC+S  I+ A+
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 489  KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            KL  +F   G   D   Y  L+   C +G+++ A ++   M  +   P +VT+N LM+G 
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 549  FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
               G  +   ++ N +L + + P+  ++N  +K  C  + +  A     D   RG+ P  
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 609  ITWHILVRA 617
             T+  LV+ 
Sbjct: 1075 KTYENLVKG 1083



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 34/462 (7%)

Query: 60   ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            +L L+E+ K Y P+ ++ S V+  Y +    DK   + + M          I+G   G+L
Sbjct: 711  LLLLMEL-KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 769

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            CR  +  +A+   + +  +G+ PD   Y T+I+G  K GD+  A   F EM  R +  +V
Sbjct: 770  CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 829

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            + Y  +I GF + GD + A +++  +  +  + P+ VT+  +ING CK G   +   + +
Sbjct: 830  LTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHN 888

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             M +     +  TY + I GLCK G+++ A  +  EM + G+  +  TYN++++G C++G
Sbjct: 889  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 291  KIKECFEL---WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             I+E  +L   +E  G     + V+Y  L+    ++G++D+A  I + +  K       T
Sbjct: 949  NIEEAVKLVGEFEAAGLNA--DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006

Query: 348  HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
              VL+NG C +G L                   D   L+N M   G   NA T NSL+  
Sbjct: 1007 FNVLMNGFCLHGMLE------------------DGEKLLNWMLAKGIAPNATTFNSLVKQ 1048

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            +   + L+ A  ++K+M  +G  P   +Y  L+ G CK     EA+   +EM  KG+   
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 1108

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            + TYS+LI G  + KK   A ++  Q  ++G   D  +++  
Sbjct: 1109 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 26/388 (6%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI-----DGFCRAGKIKE 294
           D   +  F   L   G +  A RV+ +M+  G+ +   + N  +     D +  A  I  
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676

Query: 295 CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             E  EV     C NV SYNI+I  + + G++ EA  +  L+  K    D  ++  ++NG
Sbjct: 677 FREFPEV---GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 733

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C+ G L+K  +                  L+  M + G K N+Y   S++    +  KL
Sbjct: 734 YCRFGELDKVWK------------------LIEVMKRKGLKPNSYIYGSIIGLLCRICKL 775

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A   F EM R+G  P  V Y TLI+G CK      A  F  EM  +   PD++TY+ +
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G CQ   +  A KL  +   KG  PD   +  LI+G C AG ++DA +++++M +  C
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN+VTY TL+DGL K GD D A E+ + + +  L+P+I +YN  + GLC    + +A +
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            + +    G+   T+T+  L+ A   +G
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSG 983


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 266/558 (47%), Gaps = 30/558 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAKRFLNSLWE 128
           + ++A  +    D A +VF  M E          +      LC+  + +     L  LW 
Sbjct: 190 AFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWR 249

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GL+P V +Y  +++ L KSG +  A  +   M + G+  +VV + ILI+G   +G+   
Sbjct: 250 AGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGL-ARGERFG 308

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
              I  + + +  V PN V YN +I   C+ G   + L ++D M   + +  + TY    
Sbjct: 309 EVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIA 368

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC-RAGKIKECFELWEVMGRKGC 307
             LCK G +E AER+  +M+  G+ V    +N ++     R  +++    +   M  +G 
Sbjct: 369 KALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGM 428

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             N       +R L + GK  EA+ IW     K    +  T   LI+GLC+  Y+ +A +
Sbjct: 429 RPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATK 488

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           ++               +++N+    G +L++ T N ++ G  + SK+E AI L  +M+R
Sbjct: 489 VIQ--------------TMLNK----GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 530

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G  P + ++NTL++  C + +  E +  + +M  +G +PD+++Y  +I+G C++K I  
Sbjct: 531 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 590

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +   + + +G  P+V +YN LI G    G +  A+     MK     P  VTY +LM 
Sbjct: 591 AKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMY 650

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            +   G  ++A  I++   E  +   +I Y I ++G C   +M +A  +  +   RGI P
Sbjct: 651 WMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISP 710

Query: 607 TTITWHILVRAVMNNGAS 624
             +T+  L+ A   +G S
Sbjct: 711 NKLTYTTLMYAYSKSGNS 728



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 244/510 (47%), Gaps = 26/510 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGV 166
           G LCR      A R L+S   +G  P + +    +  LV++G L  A  VFDEM E R V
Sbjct: 164 GSLCRA---ADAFRVLSS---RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNV 217

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N   Y  +I    K G      E+   L     + P VVTYNV+++ LCK GR +E  
Sbjct: 218 ALNEYSYTAMIKALCKAGKVDAGFEMLAEL-WRAGLQPTVVTYNVLMDALCKSGRVEEAF 276

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  RM++        T+   I+GL +         V +EM + G+  + V YN +I   
Sbjct: 277 RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 336

Query: 287 CRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G   +   L+ E++ +K     V+YN++ + L + G+++ A  I E         D 
Sbjct: 337 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILE---------DM 387

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            + G+ ++  C  G  N  +  L +       RL    S+ N M   G + N     + M
Sbjct: 388 LSIGMTVH--C--GLFNTVVAWLLQRTR----RLESVVSITNEMVTRGMRPNDPLMTACM 439

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
               +  K + A+ ++ +   KG    + + N LI+GLC+ +   EA   ++ ML KG +
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIE 499

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D ITY+++I G C+  K++ A+KL     ++GF PD+  +N L+H  C+ GK+E+   L
Sbjct: 500 LDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL 559

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
              MK     P++V+Y T++DG  K  D  KA E    +++  L+P++  YN  + G   
Sbjct: 560 LDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 619

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILV 615
              +S A + +      GI PT +T+  L+
Sbjct: 620 NGDISGAIDAVETMKSNGIQPTNVTYGSLM 649



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 220/485 (45%), Gaps = 23/485 (4%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           NE+ G      CRK    +A R  + +  K +KP   +Y  +   L K G++  A  + +
Sbjct: 330 NELIGWH----CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILE 385

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +M   G+  +   +N ++    ++   + +       ++   + PN       +  LCK 
Sbjct: 386 DMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKG 445

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+  E + +W +        +  T  + IHGLC+   ++ A +V + M+  GI +D++TY
Sbjct: 446 GKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITY 505

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N MI G C+  K++E  +L   M R+G   ++ ++N L+      GK++E   + + ++ 
Sbjct: 506 NIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKT 565

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +    D  ++G +I+G CK   + KA + L E+                 MD+ G K N 
Sbjct: 566 EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL-----------------MDR-GLKPNV 607

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +  N+L+ G+ +   +  AI   + M   G  PT V+Y +L+  +C      EA +   +
Sbjct: 608 FIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 667

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
             E      +I Y+++I G C+  K+  A+    +   +G +P+   Y  L++    +G 
Sbjct: 668 ARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGN 727

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            E+A +L+  M     +P+ +TY TL+    +    DK +     +    L  D   YNI
Sbjct: 728 SEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNI 787

Query: 579 TLKGL 583
              G+
Sbjct: 788 LSNGI 792



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 9/182 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  YG+N     A+D  + M        N  +G     +C     E+AK   +   E 
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            +   V  Y  +I G  K G ++ A+A F+EM  RG+  N + Y  L+  + K G+   A
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++++ +V  + V P+ +TY  +I    +    D+ +     +      KD   Y    +
Sbjct: 732 SKLFDEMV-GSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSN 790

Query: 250 GL 251
           G+
Sbjct: 791 GI 792


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 232/438 (52%), Gaps = 36/438 (8%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN  TYNV+I G CK G+  + + ++  MK +    ++ T  + + GLC+ G +  A ++
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           +REM        + ++N ++ GF  AG+  E F+  +  G +   ++ SY+IL+  L ++
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEP--DLESYHILLSALSDS 140

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------- 376
           G++ EA +++  +    C+ D  T+ VL++G CK G   +A  ++ E+ + G        
Sbjct: 141 GRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTY 197

Query: 377 ----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      ++ +A  +  +M +  C  NA T N+L+ GF +A  LE+AI LF EM +
Sbjct: 198 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 257

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFV---KEMLEKGWKPDMITYSLLINGLCQSKK 483
            GC  T+V+YNTLI+ LCK  + G  Y+ V    ++   G  P ++TY+ LI G   S++
Sbjct: 258 IGCKATIVTYNTLIDSLCK--KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SER 313

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            +  L+L C    +G  PDV  YN LI GLCSA +VEDA +L++ M    C PN+ T+N 
Sbjct: 314 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNF 370

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+ GL       K +E   +IL+    PD+ ++N  +   C    M DA E + D L  G
Sbjct: 371 LIRGLC----AQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHG 426

Query: 604 ILPTTITWHILVRAVMNN 621
             P T T + L   + ++
Sbjct: 427 FYPNTYTTYALAHGIQSS 444



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 230/474 (48%), Gaps = 36/474 (7%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R+ ++A R    +      P+ ++Y  +I G  K G +  A++VF +M   G+  N    
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N L+ G  + G    A +++ R +      P   ++N+++ G    GR    +E +  MK
Sbjct: 64  NTLLLGLCEIGQMSSALKLF-REMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            +  E D  +Y   +  L  +G +  A  ++  M  S    D +TYN ++DG+C+ G+  
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLMDGYCKIGQTY 176

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   L + + + G   NV +Y+I+I    +  KV+EA  ++  + E NC  ++ T   LI
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA- 411
            G CK G L  AI++  E                  M+K GCK    T N+L++   +  
Sbjct: 237 AGFCKAGMLEDAIKLFAE------------------MEKIGCKATIVTYNTLIDSLCKKR 278

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A+ LF ++   G +PT+V+YN+LI G    ER  +    +  M  +G KPD+ITY
Sbjct: 279 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS--ERANDGLRLLCHMHAEGCKPDVITY 336

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+GLC + +++ A +L   F      P+VT +N LI GLC+  KVE+A     N+  
Sbjct: 337 NCLISGLCSANRVEDAQRL---FNGMACAPNVTTFNFLIRGLCAQKKVEEA----RNILD 389

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           R   P++ T+NT++    K G    A E+   +L+    P+  +      G+ S
Sbjct: 390 RMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQS 443



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 200/395 (50%), Gaps = 64/395 (16%)

Query: 260 AERVYREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
           A R+++E++ +G+F  +A TYN +I GFC+ G++ +   ++  M   G L N  + N L+
Sbjct: 9   ALRLFKEVL-AGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL E G++  A+ ++  ++       S +H +L+ G    G   +AI+   E       
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKE------- 117

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      M   G + +  + + L++    + ++  A  LF  M+   CSP +++YN
Sbjct: 118 -----------MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYN 163

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            L++G CK+ +  EA S +KE+L+ G++P++ TYS++IN  C+  K++ A ++  + ++ 
Sbjct: 164 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 223

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT-GDCDK 556
              P+   +N LI G C AG +EDA++L++ M+K  C   +VTYNTL+D L K  G    
Sbjct: 224 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 283

Query: 557 ALEIWN---------------------------------HILEERLRPDIISYNITLKGL 583
           A++++N                                 H+  E  +PD+I+YN  + GL
Sbjct: 284 AVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGL 343

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           CS +R+ DA    N   C    P   T++ L+R +
Sbjct: 344 CSANRVEDAQRLFNGMACA---PNVTTFNFLIRGL 375



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 194/409 (47%), Gaps = 36/409 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   Q   A +    +      P   S+  ++ G   +G    A+  F EM   GVE +
Sbjct: 70  LCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPD 126

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  Y+IL+      G    A  ++  +    +  P+++TYNV+++G CK G+  E   + 
Sbjct: 127 LESYHILLSALSDSGRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYEAQSLM 182

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             + K   E + FTY   I+  CK   VE A  V+ +M+ES    +AVT+N +I GFC+A
Sbjct: 183 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 242

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN-GKVDEAISIWELLREKNCNADSTT 347
           G +++  +L+  M + GC   +V+YN LI  L +  G V  A+ ++  L          T
Sbjct: 243 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 302

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI G  +                    R  D   L+  M   GCK +  T N L++G
Sbjct: 303 YNSLIQGFSE--------------------RANDGLRLLCHMHAEGCKPDVITYNCLISG 342

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
              A+++E+A  LF  M+   C+P V ++N LI GLC  ++  EA    + +L++   PD
Sbjct: 343 LCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEA----RNILDRMTAPD 395

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           M T++ +I   C++  +  A ++    L+ GF P+      L HG+ S+
Sbjct: 396 MTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSS 444



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 198/418 (47%), Gaps = 52/418 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  Q  +A    + +   GL P+  +  T++ GL + G +  AL +F EM        
Sbjct: 35  FCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPT 94

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              +NIL+ GFF  G   RA E ++ +   + V P++ +Y+++++ L   GR  E   ++
Sbjct: 95  SASHNILLRGFFMAG---RAIEFFKEM-KASGVEPDLESYHILLSALSDSGRMAEAHALF 150

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  +    D  TY   + G CK G    A+ + +E++++G   +  TY+ +I+ +C+ 
Sbjct: 151 SAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 207

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K++E +E++  M    C+ N V++N LI G  + G +++AI ++  + +  C A   T+
Sbjct: 208 DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 267

Query: 349 GVLINGLCKN-GYLNKAIQILNEVE---------------EGGEGRLADAASLVNRMDKH 392
             LI+ LCK  G +  A+ + N++E               +G   R  D   L+  M   
Sbjct: 268 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAE 327

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS------------RKGCS---------- 430
           GCK +  T N L++G   A+++E+A  LF  M+            R  C+          
Sbjct: 328 GCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNI 387

Query: 431 ------PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                 P + ++NT+I   CK     +A   +K+ML+ G+ P+  T   L +G+  SK
Sbjct: 388 LDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSK 445



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 115/226 (50%), Gaps = 6/226 (2%)

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           NA+T N L+ GF +  ++  A+ +F +M   G  P   + NTL+ GLC++ +   A    
Sbjct: 24  NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF 83

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           +EM    + P   ++++L+ G   + +   A++   +    G  PD+  Y+IL+  L  +
Sbjct: 84  REMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDS 140

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G++ +A  L+S M    C P+++TYN LMDG  K G   +A  +   IL+    P++ +Y
Sbjct: 141 GRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTY 197

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +I +   C   ++ +A+E     +    +P  +T++ L+      G
Sbjct: 198 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 243



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 3/143 (2%)

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
            ++K D AL+L  + L   F P+   YN+LI G C  G++  A+ ++S+MK    +PN  
Sbjct: 2   SARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAS 61

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           T NTL+ GL + G    AL+++  +      P   S+NI L+G     R   A EF  + 
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEM 118

Query: 600 LCRGILPTTITWHILVRAVMNNG 622
              G+ P   ++HIL+ A+ ++G
Sbjct: 119 KASGVEPDLESYHILLSALSDSG 141


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 224/444 (50%), Gaps = 30/444 (6%)

Query: 174 NILIDGFFKKGDYMRAKEIWERLV-METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           N  + G  ++GD   A  + E +  +E S  P       +I  LC  GR  E   +    
Sbjct: 63  NDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASGRTAEARRVLAAC 120

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                E D   Y + + G C  G ++ A R+  +M    +  D+ TYN +I G C  G+ 
Sbjct: 121 -----EPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRT 172

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
                + + M R+GC+ +VV+Y IL+    +     +A+ + + +R K C  D  T+ V+
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVV 232

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +NG+C+                  EGR+ DA   +  +  HGC+ N  + N ++ G   A
Sbjct: 233 VNGICQ------------------EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            + E+A  L  EMS+KG  P VV++N LI+ LC+      A   + ++ + G  P+ ++Y
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +++  C+ KK+D A+      + +G  PD+  YN L+  LC  G+V+ A++L   +K 
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           + C P L++YNT++DGL K G   +ALE+ N ++ + L+PDII+Y+    GLC   R+ +
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
           A          GI P T+ ++ ++
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAIL 478



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 248/499 (49%), Gaps = 32/499 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSY--GTVINGLVKSGDLLGALAVFDEMFERGVE 167
           L R+   E+A R + S+   GL+P         +I  L  SG    A  V         E
Sbjct: 69  LVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACE 121

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +V+ YN ++ G+   G    A+    RLV +  + P+  TYN +I GLC  GR    L 
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAAR----RLVADMPMEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M +     D  TY   +   CK    + A ++  EM   G   D +TYN +++G C
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G++ +  E  + +   GC  N VSYNI+++GL    + ++A  +   + +K    +  
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T  +LI+ LC+ G +  A+++L+++                   K+GC  N+ + N +++
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIP------------------KYGCTPNSLSYNPILH 339

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            F +  K++ A+   + M  +GC P +VSYNTL+  LC+      A   + ++ +KG  P
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            +I+Y+ +I+GL ++ K   AL+L  + + KG  PD+  Y+ +  GLC   ++E+A++ +
Sbjct: 400 VLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF 459

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             ++     PN V YN ++ GL K  +   A++++ +++     P+  +Y I ++GL   
Sbjct: 460 CKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYE 519

Query: 587 SRMSDAFEFLNDALCRGIL 605
             + +A E L +   RG++
Sbjct: 520 GLVKEARELLGELCSRGVV 538



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 209/418 (50%), Gaps = 29/418 (6%)

Query: 201 SVYPNVVTYNVMIN----GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +  PN V +  + N    GL + G  +E L + + M   E         + I  LC +G 
Sbjct: 50  AASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGR 109

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
              A RV      +    D + YNAM+ G+C  G++     L   M  +   +  +YN L
Sbjct: 110 TAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEP--DSYTYNTL 162

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           IRGL   G+   A+ + + +  + C  D  T+ +L+   CK     +A+++L+E      
Sbjct: 163 IRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDE------ 216

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                       M   GC  +  T N ++NG  Q  ++++AI   K +   GC P  VSY
Sbjct: 217 ------------MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSY 264

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N ++ GLC  ER+ +A   + EM +KG+ P+++T+++LI+ LC+   ++ A+++  Q  +
Sbjct: 265 NIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK 324

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G TP+   YN ++H  C   K++ A+     M  R C P++V+YNTL+  L + G+ D 
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDA 384

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           A+E+ + + ++   P +ISYN  + GL    +  +A E LN+ + +G+ P  IT+  +
Sbjct: 385 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 29/379 (7%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYN--AMIDGFCRAGKIKECFELWEVMGRK 305
           + GL + G++E A R+   M  SG+   A      A+I   C +G+  E   +       
Sbjct: 66  LRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEP- 122

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +V++YN ++ G    G++D A     L+ +     DS T+  LI GLC         
Sbjct: 123 ---DVMAYNAMVAGYCVTGQLDAA---RRLVADMPMEPDSYTYNTLIRGLC--------- 167

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                    G GR  +A  +++ M + GC  +  T   L+    + S  + A+ L  EM 
Sbjct: 168 ---------GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KGC+P +++YN ++NG+C+  R  +A  F+K +   G +P+ ++Y++++ GLC +++ +
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A KL  +  QKG+ P+V  +N+LI  LC  G VE A+++   + K  C PN ++YN ++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
               K    D+A+     ++     PDI+SYN  L  LC    +  A E L+    +G  
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 606 PTTITWHILVRAVMNNGAS 624
           P  I+++ ++  +   G +
Sbjct: 399 PVLISYNTVIDGLTKAGKT 417



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 130/253 (51%), Gaps = 12/253 (4%)

Query: 67  QKCYCPEDVALSVIQAY-GKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQF 116
           QK Y P  V  +++ ++  +  + + A++V  ++ + +GC    L         C++++ 
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK-YGCTPNSLSYNPILHAFCKQKKM 347

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++A  F+  +  +G  PD+ SY T++  L + G++  A+ +  ++ ++G    ++ YN +
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           IDG  K G    A E+   +V +  + P+++TY+ + +GLC+  R +E +  + +++   
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTK-GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              ++  Y + + GLCK      A  ++  M+ +G   +  TY  +I+G    G +KE  
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEAR 526

Query: 297 ELWEVMGRKGCLN 309
           EL   +  +G ++
Sbjct: 527 ELLGELCSRGVVS 539


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 244/505 (48%), Gaps = 23/505 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKS-GDLLGALAVFDEMFERGVETNVVCYNIL 176
           +A+R    +   GL   V S    +  L K       A+ VF E  E GV  NV  YNI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           I    + G    A  +   L+ME   Y P+V++Y+ ++NG C+ G  D+  ++ + MK+ 
Sbjct: 253 IHFVCQLGRIKEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             + +S+ Y S I  LC+   +  AE  + EM+  GI  D V Y  +IDGFC+ G I+  
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 296 FEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            +  +E+  R    +V++Y  +I G  + G + EA  ++  +  K    DS T   LING
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            CK G++                   DA  + N M + GC  N  T  +L++G  +   L
Sbjct: 431 YCKAGHMK------------------DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           ++A  L  EM + G  P + +YN+++NGLCK     EA   V E    G   D +TY+ L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++  C+S ++D A ++  + L KG  P +  +N+L++G C  G +ED  +L + M  +  
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN  T+N+L+       +   A  I+  +    + PD  +Y   +KG C    M +A+ 
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 595 FLNDALCRGILPTTITWHILVRAVM 619
              +   +G   +  T+ +L++  +
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFL 677



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 234/466 (50%), Gaps = 25/466 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  + +K  + +  +  KGLKP+ Y YG++I  L +   L  A   F EM  +G+  + 
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K+GD +RA   +   +    + P+V+TY  +I+G C+ G   E  +++ 
Sbjct: 352 VVYTTLIDGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M     E DS T+   I+G CKAG+++ A RV+  M+++G   + VTY  +IDG C+ G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    EL   M + G   N+ +YN ++ GL ++G ++EA+ +         NAD+ T+ 
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L++  CK+G ++KA +IL E                  M   G +    T N LMNGF 
Sbjct: 531 TLMDAYCKSGEMDKAQEILKE------------------MLGKGLQPTIVTFNVLMNGFC 572

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
               LE+   L   M  KG +P   ++N+L+   C       A +  K+M  +G  PD  
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY  L+ G C+++ +  A  L  +   KGF+  V+ Y++LI G     K  +A +++  M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALE-----IWNHILEERLR 570
           ++     +   ++   D  +K    D  ++     I N++++E+LR
Sbjct: 693 RREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 738



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 230/489 (47%), Gaps = 21/489 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P V+        LV  G L  A  VF++M   G+  +V   N+ +    K       
Sbjct: 172 GSDPRVFD--VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             I  R   E  V  NV +YN++I+ +C+ GR  E   +   M+      D  +Y + ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C+ G ++   ++   M   G+  ++  Y ++I   CR  K+ E  E +  M R+G L 
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           + V Y  LI G  + G +  A   +  +  ++   D  T+  +I+G C         QI 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC---------QI- 399

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G + +A  L + M   G + ++ T   L+NG+ +A  +++A  +   M + G
Sbjct: 400 --------GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           CSP VV+Y TLI+GLCK      A   + EM + G +P++ TY+ ++NGLC+S  I+ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           KL  +F   G   D   Y  L+   C +G+++ A ++   M  +   P +VT+N LM+G 
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G  +   ++ N +L + + P+  ++N  +K  C  + +  A     D   RG+ P  
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631

Query: 609 ITWHILVRA 617
            T+  LV+ 
Sbjct: 632 KTYENLVKG 640



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 34/462 (7%)

Query: 60  ILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
           +L L+E+ K Y P+ ++ S V+  Y +    DK   + + M          I+G   G+L
Sbjct: 268 LLLLMEL-KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  +  +A+   + +  +G+ PD   Y T+I+G  K GD+  A   F EM  R +  +V
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  +I GF + GD + A +++  +  +  + P+ VT+  +ING CK G   +   + +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +     +  TY + I GLCK G+++ A  +  EM + G+  +  TYN++++G C++G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 291 KIKECFEL---WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            I+E  +L   +E  G     + V+Y  L+    ++G++D+A  I + +  K       T
Sbjct: 506 NIEEAVKLVGEFEAAGLNA--DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             VL+NG C +G L                   D   L+N M   G   NA T NSL+  
Sbjct: 564 FNVLMNGFCLHGMLE------------------DGEKLLNWMLAKGIAPNATTFNSLVKQ 605

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +   + L+ A  ++K+M  +G  P   +Y  L+ G CK     EA+   +EM  KG+   
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           + TYS+LI G  + KK   A ++  Q  ++G   D  +++  
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 26/388 (6%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI-----DGFCRAGKIKE 294
           D   +  F   L   G +  A RV+ +M+  G+ +   + N  +     D +  A  I  
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233

Query: 295 CFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             E  EV     C NV SYNI+I  + + G++ EA  +  L+  K    D  ++  ++NG
Sbjct: 234 FREFPEV---GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C+ G L+K  +                  L+  M + G K N+Y   S++    +  KL
Sbjct: 291 YCRFGELDKVWK------------------LIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
             A   F EM R+G  P  V Y TLI+G CK      A  F  EM  +   PD++TY+ +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+G CQ   +  A KL  +   KG  PD   +  LI+G C AG ++DA +++++M +  C
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN+VTY TL+DGL K GD D A E+ + + +  L+P+I +YN  + GLC    + +A +
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
            + +    G+   T+T+  L+ A   +G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSG 540


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 225/422 (53%), Gaps = 22/422 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V + N +++GL K G   +   ++  M +   E    ++   I+GLCK G +  A  + 
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFE----LWEVMGRKGCLNVVSYNILIRGL 320
            +M   G+  + +TYN +IDG+C+ GKI + ++    L E+     C N V++NILI G 
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF 246

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++  V  A+ ++  +  +    +  T+  LINGLC NG +N                  
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN------------------ 288

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A +L ++M     K N  T N+L+NGF +   ++ A  LF +M ++G +P V +YN LI
Sbjct: 289 EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILI 348

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +  CK E   +A++  + ML KG  PD+ TY+ LI GLC+   ++ A  L  +   K   
Sbjct: 349 DAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLK 408

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D+  YNILI  LC+ G+++ AL+L   M ++   P+ +TYNT++DG  K G+   AL +
Sbjct: 409 ADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL 468

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + + +     ++ +YN+ +KG C   ++ DA   LN+ L +G++P  +T+ I+   +M 
Sbjct: 469 RSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMME 528

Query: 621 NG 622
            G
Sbjct: 529 KG 530



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 236/466 (50%), Gaps = 34/466 (7%)

Query: 70  YCPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKA 119
           +C   + + + + AY KN       + F+R ++ +G +  +         L +  +    
Sbjct: 89  FCANSIIVDILVWAYAKNLRTRLGFEAFKRASD-YGLKLSVTSCNPLMSGLVKVGEIGDM 147

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           +     +  + ++P + S+  VINGL K G L  A  + ++M  RGV  NV+ YN LIDG
Sbjct: 148 EFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDG 207

Query: 180 FFKKGD---YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           + K G      +A  I + +  +  + PN VT+N++I+G CK       ++++  M +  
Sbjct: 208 YCKMGKIGKMYKADAILKEMRAD-GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG 266

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + +  TY S I+GLC  G V  A  +  +MV S +  + +T+NA+++GFC+   +K+  
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL++ M ++G   NV +YNILI    ++  +++A +++ ++  K    D +T+  LI GL
Sbjct: 327 ELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C+                  +G L  A +LV+ MD    K +  T N L++      +++
Sbjct: 387 CR------------------KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L  EM RKG  P+ ++YNT+I+G CK      A +   +M + G   ++ TY++LI
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G C+  K++ A  L  + L+KG  P+   Y I+   +   G V D
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 196/354 (55%), Gaps = 16/354 (4%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGLL 321
            ++   + G+ +   + N ++ G  + G+I +  F   E++ R+    ++S+NI+I GL 
Sbjct: 115 AFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLC 174

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + GK+++A  I E ++ +  +A+  T+  LI+G CK G +               G++  
Sbjct: 175 KVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI---------------GKMYK 219

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A +++  M   G   N  T N L++GF +   +  A+ +F EM+R+G  P VV+YN+LIN
Sbjct: 220 ADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLIN 279

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC   +  EA +   +M+    KP++IT++ L+NG C++K +  A +L     ++G TP
Sbjct: 280 GLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITP 339

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +VT YNILI   C    +EDA  LY  M  +   P++ TYN L+ GL + GD + A  + 
Sbjct: 340 NVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLV 399

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + +  + L+ D+I+YNI +  LC+   M  A   L++   +G+ P+ +T++ ++
Sbjct: 400 SEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 242/477 (50%), Gaps = 24/477 (5%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +F     + C  R+ ++A +    + EKG+ P + +   +++  +K   +  A  ++ EM
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCG 220
           F   + + V  +NI+++   K+G   +A+E      ME   + PNVV+YN +I+G    G
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG--FMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +    + D M+    E DS+TY S I G+CK G +E A  ++ +MVE G+  +AVTYN
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREK 339
            +IDG+C  G ++  F   + M +KG +  VS YN+L+  L   G++ EA  + + +R+K
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ T+ +LING  + G   KA  + NE+   G                   R+ +A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L  ++   G   +    N++++G      +E A  L KEM RK   P  V++NTL+ G
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            C+  +  EA   + EM  +G KPD I+Y+ LI+G  +   I  A ++  + L  GF P 
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           +  YN LI  LC   + + A +L   M  +   P+  TY +L++G+   G+ D  +E
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTLVE 652



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 233/471 (49%), Gaps = 26/471 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE---RLVMETSVYPNVVTYN 210
           A   F  M E+G+   +   N ++  F K      A  ++    RL + ++VY    T+N
Sbjct: 198 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVY----TFN 253

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           +M+N LCK G+  +  E    M+    + +  +Y + IHG    GN+EGA R+   M   
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           GI  D+ TY ++I G C+ G+++E   L++ M   G + N V+YN LI G    G ++ A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            S  + + +K      +T+ +L++ L                    EGR+ +A  ++  M
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFM------------------EGRMGEADDMIKEM 415

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            K G   +A T N L+NG+ +    + A  L  EM  KG  PT V+Y +LI  L +  R 
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA    +++L++G  PD+I ++ +++G C +  ++ A  L  +  +K   PD   +N L
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           + G C  GKVE+A  L   MK+R   P+ ++YNTL+ G  + GD   A  + + +L    
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            P +++YN  +K LC       A E L + + +GI P   T+  L+  + N
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 646



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 225/471 (47%), Gaps = 58/471 (12%)

Query: 190 KEIWERLVMET---SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           +E+++ L +     SV  ++V +++++   C+  R DE  + +  MK+        T   
Sbjct: 161 RELFDELTLSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCND 219

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            +    K   +E A  +Y EM    I     T+N M++  C+ GK+K+  E    M   G
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 279

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NVVSYN +I G    G ++ A  I + +R K    DS T+G LI+G+CK        
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK-------- 331

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     EGRL +A+ L ++M + G   NA T N+L++G+     LE A     EM 
Sbjct: 332 ----------EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING-------- 477
           +KG  P+V +YN L++ L    R GEA   +KEM +KG  PD ITY++LING        
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 441

Query: 478 ---------------------------LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
                                      L +  ++  A  L  + L +G +PDV M+N ++
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G C+ G VE A  L   M +++  P+ VT+NTLM G  + G  ++A  + + +    ++
Sbjct: 502 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 561

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           PD ISYN  + G      + DAF   ++ L  G  PT +T++ L++ +  N
Sbjct: 562 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 172/348 (49%), Gaps = 19/348 (5%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
           ++ ++ ++   C   +  E F+ + +M  KG +  + + N ++   L+  +++ A  ++ 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +     ++   T  +++N LCK                  EG+L  A   +  M+  G 
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCK------------------EGKLKKAREFIGFMEGLGF 280

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K N  + N++++G+     +E A  +   M  KG  P   +Y +LI+G+CK  R  EA  
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 340

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
              +M+E G  P+ +TY+ LI+G C    ++ A     + ++KG  P V+ YN+L+H L 
Sbjct: 341 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 400

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G++ +A  +   M+K+  +P+ +TYN L++G  + G+  KA ++ N +L + + P  +
Sbjct: 401 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +Y   +  L   +RM +A +     L +G+ P  I ++ +V     NG
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 242/487 (49%), Gaps = 20/487 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++   K      A+++   +  +G++ +++  NILI+ F   G       +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             + +++    P+ +T+  +I GLC  G+ ++ L   D++     + D  +Y + I+G+C
Sbjct: 117 LAK-ILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVV 311
           K G+  GA ++ R++       +   YN +ID  C+   + E + L+  M  KG   +VV
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G     K+ EAI +   +  K  N +  T+ +L++ LCK              
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK-------------- 281

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
               EG++ +A +++  M K   K +  T ++LM+G+    +L+ A  +F  MS  G +P
Sbjct: 282 ----EGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SY  LING CK +   EA +  KEM +K   P ++TYS LI+GLC+S +I     L 
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +   +G   +V  YN LI GLC  G ++ A+ L++ MK +   P   T+  L+DGL K 
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G    A E +  +L +    D+  YN+ + G C    + +A   L+     G +P  +T+
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517

Query: 612 HILVRAV 618
            I++ A+
Sbjct: 518 DIIINAL 524



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 259/529 (48%), Gaps = 36/529 (6%)

Query: 90  DKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           D A+  F RM            N+I    A I    + +  A    + L  KG++PD+ +
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKI----KHYSTAVSLSHRLELKGIQPDLIT 96

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
              +IN     G +    +V  ++ +RG + + + +  LI G   KG   +A    ++L+
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
            +  +  + V+Y  +ING+CK G     +++  ++     + +   Y + I  LCK   V
Sbjct: 157 AQ-GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNIL 316
             A  ++ EM   GI  D VTY  +I GFC A K+KE   L   M  K    NV +YNIL
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  L + GKV EA ++  ++ +     D  T+  L++G      L KA  + N       
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN------- 328

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                A SL+      G   + ++   L+NGF +   ++ A+ LFKEM +K   P +V+Y
Sbjct: 329 -----AMSLM------GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           ++LI+GLCK  R    +  + EM ++G   ++ITY+ LI+GLC++  +D A+ L  +   
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +G  P    + IL+ GLC  G+++DA + + ++  +    ++  YN +++G  K G  ++
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEE 497

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           AL + + + E    P+ ++++I +  L        A + L   +CRG+L
Sbjct: 498 ALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 227/463 (49%), Gaps = 20/463 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A++ F+ M        ++ +N ++D F K   Y  A  +  RL ++  + P+++T N++I
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELK-GIQPDLITLNILI 101

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+      +  ++ K   +  + T+ + I GLC  G V  A   + +++  GI 
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
            D V+Y  +I+G C+ G  +   +L  ++ GR    NV  YN +I  L +   V EA  +
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K  +AD  T+  LI G C                     +L +A  L+N M   
Sbjct: 222 FSEMTAKGISADVVTYTTLIYGFCI------------------ASKLKEAIGLLNEMVLK 263

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N YT N L++   +  K++ A  +   M +    P V++Y+TL++G   V    +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 M   G  PD+ +Y++LING C++K +D AL L  +  QK   P +  Y+ LI G
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++     L   M+ R    N++TYN+L+DGL K G  D+A+ ++N + ++ +RP 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             ++ I L GLC   R+ DA E   D L +G       +++++
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 103/202 (50%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+  F  M     +P ++ +N +++   K++ +  A S    +  KG +PD+IT ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C   +I     +  + L++G+ P    +  LI GLC  G+V  AL  +  +  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              + V+Y TL++G+ K GD   A+++   I     +P++  YN  +  LC    +S+A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 594 EFLNDALCRGILPTTITWHILV 615
              ++   +GI    +T+  L+
Sbjct: 220 GLFSEMTAKGISADVVTYTTLI 241



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%)

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           ++   +A S    ML     P +I ++ +++   + K    A+ L  +   KG  PD+  
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            NILI+  C  G++     + + + KR   P+ +T+ TL+ GL   G  +KAL   + +L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            + ++ D +SY   + G+C       A + +     R   P    ++ ++ A+
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 8/128 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I    KN   D+A+ +F +M +         F      LC+  + + A+     L  K
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTK 473

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   DVY Y  +ING  K G L  AL +  +M E G   N V ++I+I+  FKK +  +A
Sbjct: 474 GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKA 533

Query: 190 KEIWERLV 197
           +++  +++
Sbjct: 534 EKLLRQMI 541



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 52/104 (50%)

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S   V+DA+  ++ M      P ++ +N ++D   K      A+ + + +  + ++PD+I
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI 95

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + NI +   C   +++  F  L   L RG  P TIT+  L++ +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGL 139


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 225/479 (46%), Gaps = 18/479 (3%)

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP 204
           L K+     A++ F  M       ++V  N L+    K   Y     +   L  + +  P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++VT ++ IN L   G+      +  ++ K     D FT  + + GLC  G    A  +Y
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
              V  G   D V Y  +I+G C+ GK ++  EL   M + G   N++ YN+++ GL + 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G V EA  +   +  K    D  T+  LI+G C  G    A+++LNE+            
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM------------ 257

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                + K   + + YT N L++   +   +  A  +F  M ++G  P VVS N L+NG 
Sbjct: 258 -----VMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGW 312

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C      EA      M+E+G  P++I+YS LING C+ K +D AL+L  +  Q+   PD 
Sbjct: 313 CLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDT 372

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN L+ GL  +G+V     L   M+     P+L+TYN L+D   K    DKAL ++ H
Sbjct: 373 VTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQH 432

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I++  + P+I +YNI + GLC   RM  A E       +G  P   T++I++  +   G
Sbjct: 433 IVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 252/524 (48%), Gaps = 34/524 (6%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSM 88
           + P +  +   FH +L  L  P  +V ++++L  I   K Y P  V+L S + + G    
Sbjct: 32  KTPTFDDAVSTFHRMLH-LHPPPSIVSLNKLLSSIMKTKHY-PTVVSLCSHLDSKGTPKP 89

Query: 89  PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
               L +F       G          Q   A   +  + ++G   D ++  T++ GL   
Sbjct: 90  SLVTLSIFINSLTHLG----------QMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLK 139

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G    AL ++D    +G   + VCY  LI+G  K G    A E+  ++  +  V PN++ 
Sbjct: 140 GRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM-EKGGVRPNLIM 198

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN++++GLCK G   E   +   M       D FTY S IHG C AG  +GA R+  EMV
Sbjct: 199 YNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMV 258

Query: 269 -ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
            +  +  D  T+N ++D  C+ G + E   ++ +M ++G   +VVS N L+ G    G +
Sbjct: 259 MKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCM 318

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            EA  +++ + E+    +  ++  LING CK   +++A+++L E                
Sbjct: 319 SEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTE---------------- 362

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M +     +  T N L++G  ++ ++     L + M   G +P +++YN L++   K 
Sbjct: 363 --MHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKR 420

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
           E   +A +  + +++ G  P++ TY++LI+GLC+  ++  A ++      KG  P++  Y
Sbjct: 421 ECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTY 480

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           NI+I+GL   G +++A  L   M      PN VT++ L+  L +
Sbjct: 481 NIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 1/184 (0%)

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-P 501
           L K   F +A S    ML     P +++ + L++ + ++K     + LC     KG   P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            +   +I I+ L   G++  A  + + + KR    +  T  TLM GL   G   +AL ++
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           +H + +    D + Y   + GLC   +  DA E L      G+ P  I ++++V  +   
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 622 GAST 625
           G  T
Sbjct: 210 GLVT 213



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           ++  Y K    DKAL +FQ + +  G    I         LC+  + + AK     L  K
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDT-GISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVK 471

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           G +P++ +Y  +INGL + G L  A A+  EM + G   N V ++ L+    +K
Sbjct: 472 GCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 249/504 (49%), Gaps = 22/504 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    + +  KG   D   Y  VI   V+ G    A+ +FDEM   GV+ +   Y I I 
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNER 237
           G  K  D  RA ++  ++  E    P  +TY+ +++ L K  R DE L + D+M     +
Sbjct: 229 GLCKLRDADRALQVLGKM-REAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK 287

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + D       +HG C  G V  A  ++ E+V  G+    VTY  +I G    G   E ++
Sbjct: 288 KMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYK 347

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L   M  +G L +   +N++I+GLL + +  +AI + +L+ +     D  T+G LI+ LC
Sbjct: 348 LCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLC 406

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K+  L++A+ + ++++E G                   K +  T +SL+ G+ +  +++ 
Sbjct: 407 KHQKLHEAVNLWDKMKEAG------------------VKPSIVTYHSLLLGYCEKGRMDE 448

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ L+ EM  KG  P  V+Y TL+ G  K + F  AY+ + EM + G      TY++LIN
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN 508

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GL    ++    ++  +FL +GF P    YN +I+G   AG +  A  +Y  M+K+   P
Sbjct: 509 GLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITP 568

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           N+VTY + +DG  +T  CD A+++  ++  + ++PDI +YN  +   C    MS A  FL
Sbjct: 569 NIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL 628

Query: 597 NDALCRGILPTTITWHILVRAVMN 620
              L  G+ P    ++  V    N
Sbjct: 629 VLLLKDGLTPDVTVYNSFVTGYKN 652



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 280/581 (48%), Gaps = 29/581 (4%)

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAK 120
           CY    +   VI+A  +  M   A+ +F  M          ++      LC+ R  ++A 
Sbjct: 181 CYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRAL 240

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYNILIDG 179
           + L  + E G +P   +Y +V++ LVK   +  AL + D+M    G + +VV   +L+ G
Sbjct: 241 QVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHG 300

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           +   G+  +A ++++ +V +  V P  VTY V+I G    G  DE  ++  +M +     
Sbjct: 301 YCLNGEVGKALDLFDEVVSD-GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLP 359

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
            ++ +   I GL +    + A  + + +V++G+  D  TY  +I   C+  K+ E   LW
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M   G   ++V+Y+ L+ G  E G++DEA+ ++  + +K    +  T+  L+ G  K 
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 359 GYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRMDKHGCKLNAYTC 401
              + A  +LNE+ + G                   R+ +   ++ R    G      T 
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NS++NGF++A  + +A  ++++M +KG +P +V+Y + I+G C+      A   +  +  
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G +PD+  Y+  I+  C+   +  AL      L+ G TPDVT+YN  + G  +   + +
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A + Y +M K+  V +   Y TL+DG  K G+   ALE+++ ++   + PD  ++     
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTH 718

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           GLC    +  A   L+D     + P  +T+++L+ A + +G
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDG 759



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 158/626 (25%), Positives = 286/626 (45%), Gaps = 36/626 (5%)

Query: 21  ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI 80
           AL LFD    +  YA +  ++  ++R  +   +     R+ + +        E V    I
Sbjct: 169 ALTLFDEMRGKGCYADA-KMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITI 227

Query: 81  QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNS-LWEKGL 131
               K    D+AL V  +M E         +     +L + R+ ++A R  +  L   G 
Sbjct: 228 SGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK 287

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           K DV     +++G   +G++  AL +FDE+   GV    V Y +LI G   +G      E
Sbjct: 288 KMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEG---MTDE 344

Query: 192 IWE--RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++  R ++E  + P+   +N++I GL +  R+ + + +  ++  +    D FTY   IH
Sbjct: 345 TYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIH 403

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CL 308
            LCK   +  A  ++ +M E+G+    VTY++++ G+C  G++ E  +L+  M  KG   
Sbjct: 404 WLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPP 463

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL------------- 355
           N V+Y  L++G ++    D A ++   +R+   +    T+ +LINGL             
Sbjct: 464 NEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEML 523

Query: 356 ---CKNGYLNKAIQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
                 G++   +   N +  G    G +  A  +  +M K G   N  T  S ++G+ +
Sbjct: 524 KRFLSEGFVPTTMT-YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCR 582

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
            +  + A+ L   + R G  P + +YN  I+  CK      A  F+  +L+ G  PD+  
Sbjct: 583 TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTV 642

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+  + G    K +  A K     +++    D  +Y  LI G    G V  AL+LYS M 
Sbjct: 643 YNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM 702

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
             + +P+  T+  L  GL ++GD D A  + + +    + P+I++YN+ +       ++ 
Sbjct: 703 ANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQ 762

Query: 591 DAFEFLNDALCRGILPTTITWHILVR 616
           +AF+  ++ L  G++P   T+ IL R
Sbjct: 763 EAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 21/362 (5%)

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y  MV  G+  DA +   ++          +   L++ M  KGC  +   Y+++IR  + 
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G   +A+ +++ +       D   + + I+GLCK    ++A+Q+L ++ E G       
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAG------- 250

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS-RKGCSPTVVSYNTLIN 441
                       +    T +S+++  ++  +++ A+ L  +M    G    VV    L++
Sbjct: 251 -----------FEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMH 299

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C     G+A     E++  G  P  +TY +LI G       D   KLC Q +++G  P
Sbjct: 300 GYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLP 359

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
               +N++I GL    + +DA+ L   +     VP++ TY  L+  L K     +A+ +W
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + + E  ++P I++Y+  L G C   RM +A +  ++   +G  P  +T+  L++  +  
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 622 GA 623
            A
Sbjct: 479 KA 480


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 242/476 (50%), Gaps = 23/476 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+   F ++  FL  L  KG KPDV     +I+GL  S  +  A+ V   + E     ++
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDL 126

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + YN +I GF +      A ++ +R+       P++VTYN++I  LC  G  D  LE  +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKN 185

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++ K   +    TY   I      G ++ A ++  EM+E  +  D  TYN++I G CR G
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245

Query: 291 KIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +   F++   +  KG   +V++YNIL+RGLL  GK +    +   +  + C A+  T+ 
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYS 305

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           VLI+ +C++G          +VEEG          L+  M K G K + Y  + L+    
Sbjct: 306 VLISSVCRDG----------KVEEG--------VGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  +++ AI +   M   GC P +V+YNT++  LCK +R  EA S  +++ E G  P+  
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y+ + + L  +     AL +  + L KG  PD   YN LI  LC  G V++A++L  +M
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467

Query: 530 KKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +  +  C P++V+YN ++ GL K      A+E+   ++++  RP+  +Y   ++G+
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 213/435 (48%), Gaps = 21/435 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV    +I+GL      D+ +++   + +N    D   Y + I G C+A  ++ A +V
Sbjct: 90  PDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDLIAYNAIITGFCRANRIDSAYQV 148

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              M   G   D VTYN +I   C  G +    E    + ++ C   VV+Y ILI   L 
Sbjct: 149 LDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLL 208

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G +DEA+ + + + E N   D  T+  +I G+C+ GY+++A QI++ +   G       
Sbjct: 209 QGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVIT 268

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +G+      L++ M   GC+ N  T + L++   +  K+E  + L K+M 
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK 328

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           +KG  P    Y+ LI  LCK  R   A   +  M+  G  PD++ Y+ ++  LC+ K+ D
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL +  +  + G +P+ + YN +   L S G    AL +   M  +   P+ +TYN+L+
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448

Query: 546 DGLFKTGDCDKALEIWNHILEE--RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
             L + G  D+A+E+   +  E    +P ++SYNI L GLC  SR+SDA E L   + +G
Sbjct: 449 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508

Query: 604 ILPTTITWHILVRAV 618
             P   T+  L+  +
Sbjct: 509 CRPNETTYTFLIEGI 523



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 219/440 (49%), Gaps = 22/440 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   +  +KA + ++ L   G  PD+ +Y  +I G  ++  +  A  V D M  +G   +
Sbjct: 102 LFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPD 160

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YNILI     +G    A E   +L+ E +  P VVTY ++I      G  DE +++ 
Sbjct: 161 IVTYNILIGSLCSRGMLDSALEFKNQLLKE-NCKPTVVTYTILIEATLLQGGIDEAMKLL 219

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +   + D FTY S I G+C+ G V+ A ++   +   G   D +TYN ++ G    
Sbjct: 220 DEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQ 279

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK +  +EL   M  +GC  NVV+Y++LI  +  +GKV+E + + + +++K    D   +
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI  LCK G ++ AI++L+ +   G                 + R  +A S+  ++ +
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGE 399

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC  NA + NS+ +          A+ +  EM  KG  P  ++YN+LI+ LC+     E
Sbjct: 400 VGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDE 459

Query: 452 AYSFV--KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           A   +   EM     KP +++Y++++ GLC+  ++  A+++    + KG  P+ T Y  L
Sbjct: 460 AIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFL 519

Query: 510 IHGLCSAGKVEDALQLYSNM 529
           I G+   G + DA  L + +
Sbjct: 520 IEGIGFGGCLNDARDLATTL 539



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK G F+E L     +     + D       IHGL  +  ++ A +V   ++E+    D 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGHPDL 126

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
           + YNA+I GFCRA +I   +++ + M  KG   ++V+YNILI  L   G +D A+     
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           L ++NC     T+ +LI      G +++A+++L+E+ E            +N       +
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE------------IN------LQ 228

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            + +T NS++ G  +   ++ A  +   +S KG +P V++YN L+ GL    ++   Y  
Sbjct: 229 PDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYEL 288

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + +M+ +G + +++TYS+LI+ +C+  K++  + L     +KG  PD   Y+ LI  LC 
Sbjct: 289 MSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G+V+ A+++   M    CVP++V YNT++  L K    D+AL I+  + E    P+  S
Sbjct: 349 EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS 408

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           YN     L S      A   + + L +G+ P  IT++ L+  +  +G
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 214/428 (50%), Gaps = 34/428 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-NEIFGCEA-------GILCRKRQFEKAKRFLNSLWEK 129
           ++I  + + +  D A  V  RM N+ F  +        G LC +   + A  F N L ++
Sbjct: 131 AIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE 190

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
             KP V +Y  +I   +  G +  A+ + DEM E  ++ ++  YN +I G  ++G   RA
Sbjct: 191 NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRA 250

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +I    +      P+V+TYN+++ GL   G+++   E+   M     E +  TY   I 
Sbjct: 251 FQIISS-ISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            +C+ G VE    + ++M + G+  D   Y+ +I   C+ G++    E+ +VM   GC+ 
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++V+YN ++  L +  + DEA+SI+E L E  C+ +++++  + + L   G+  +A+ ++
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF--KEMSR 426
            E+                 +DK G   +  T NSL++   +   ++ AI L    EM  
Sbjct: 430 LEM-----------------LDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMES 471

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL----CQSK 482
             C P+VVSYN ++ GLCKV R  +A   +  M++KG +P+  TY+ LI G+    C + 
Sbjct: 472 SECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLND 531

Query: 483 KIDMALKL 490
             D+A  L
Sbjct: 532 ARDLATTL 539


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 248/464 (53%), Gaps = 19/464 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P V  +  ++  +VK      A+++  +M  RG+  ++V  +ILI+ +   G    A  +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              +V++     N +T   ++ GLC  G   + LE  D +       D  TY + I+GLC
Sbjct: 136 LG-MVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC 194

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
           K G    A  +  +M    +  + V YN ++DG C+ G + E  +L+ +V+GR    +V 
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +Y  LI G    G+  E   +   + ++N N +  T+ +LI+ LCK G L KA  + N +
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 372 EEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            E G+                   + +A  L +   + G   + ++ N L+ G+ + +++
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ LF +M+ K  +P +V+Y++LI+GLCK  R   A+     + + G  P++ITY+++
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++ LC+ + +D A++L     ++G TP+V+ YNILI+G C + ++++A+ L+  M +RN 
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           VP+ VTYN L+DGL K+G    A E++N + +     D+I+YNI
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 243/482 (50%), Gaps = 19/482 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F  +       +VV +N+++    K   Y  A  + +++ +   + P++VT +++I
Sbjct: 62  AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLR-GITPSIVTLSILI 120

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G       +   + K   + ++ T  + + GLC  G V  A   +  +V  G  
Sbjct: 121 NCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFL 180

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           +D VTY  +I+G C+ G  +E FEL   M G+    NVV YN+++ GL ++G V EA  +
Sbjct: 181 LDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDL 240

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           +  +  +  + D  T+  LI+G C  G   +  ++L ++ +                   
Sbjct: 241 YSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCK 300

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           +G L  A  + N M + G + +  T N+LM+G+   + +  A  LF   +  G +P V S
Sbjct: 301 KGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS 360

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN LI G CK  R  EA S   +M  K   P+++TYS LI+GLC+S +I  A +L     
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G +P+V  YNI++  LC    V+ A++L++ M +R   PN+ +YN L++G  K+   D
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRID 480

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A+ ++  +    L PD ++YN  + GLC   R+S A+E  N     G     IT++IL 
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILF 540

Query: 616 RA 617
            A
Sbjct: 541 DA 542



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 237/487 (48%), Gaps = 27/487 (5%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D A+ +F R+  +        F    G + + + +  A      +  +G+ P + +   +
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN     G +  A +V   + +RG + N +    ++ G    G+  +A E  + +V +  
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           +  + VTY  +INGLCK G   E  E+  +M+      +   Y   + GLCK G V  A 
Sbjct: 180 LL-DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
            +Y ++V  GI  D  TY  +I GFC  G+ +E   L  +++ R   LNV +YNILI  L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            + G + +A  +  L+ E+    D  T   L++G C    + +A ++ +   E G     
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                         R+ +A SL N+M+      N  T +SL++G  ++ ++  A  LF  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +   G SP V++YN +++ LCK++   +A      M E+G  P++ +Y++LING C+SK+
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ID A+ L  +  ++   PD   YN LI GLC +G++  A +L++ M       +++TYN 
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 544 LMDGLFK 550
           L D   K
Sbjct: 539 LFDAFSK 545



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 203/393 (51%), Gaps = 19/393 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +  KA  F +S+  +G   D  +YGT+INGL K G    A  +  +M  + V  N
Sbjct: 158 LCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPN 217

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN+++DG  K G    A++++  +V    + P+V TY  +I+G C  G++ E   + 
Sbjct: 218 VVIYNMIVDGLCKDGLVTEARDLYSDVVGR-GIDPDVFTYTCLIHGFCGLGQWREVTRLL 276

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       + +TY   I  LCK G +  A  +   M+E G   D VT+N ++ G+C  
Sbjct: 277 CDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLY 336

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + E  +L++     G   +V SYNILI G  +N ++DEA+S++  +  K    +  T+
Sbjct: 337 NDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTY 396

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEG----------------RLADAA-SLVNRMDK 391
             LI+GLCK+G ++ A ++ + + +GG                  +L D A  L N M +
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE 456

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N  + N L+NG+ ++ +++ A+ LF+EM R+   P  V+YN LI+GLCK  R   
Sbjct: 457 RGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISH 516

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           A+     M + G   D+ITY++L +   + + +
Sbjct: 517 AWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 28/210 (13%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +I  Y KN+  D+AL +F +MN                            K L P++ +Y
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMN---------------------------YKKLAPNIVTY 396

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            ++I+GL KSG +  A  +F  + + G   NV+ YNI++D   K     +A E++  L+ 
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN-LMF 455

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           E  + PNV +YN++ING CK  R DE + +++ M +     DS TY   I GLCK+G + 
Sbjct: 456 ERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRIS 515

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            A  ++  M + G  VD +TYN + D F +
Sbjct: 516 HAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 111/204 (54%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+ LF  +      P+VV +N ++  + K++ +  A S  K+M  +G  P ++T S+
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C    +  A  +    L++G+  +      ++ GLC  G+V  AL+ + ++  + 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
            + + VTY TL++GL K G   +A E+ + +  + +RP+++ YN+ + GLC    +++A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
           +  +D + RGI P   T+  L+  
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHG 262



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 83/175 (47%)

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A +    ++     P ++ +++++  + + K    A+ L  Q   +G TP +   +ILI
Sbjct: 61  DAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILI 120

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +  C  G +  A  +   + KR    N +T  T+M GL   G+  KALE  + ++ +   
Sbjct: 121 NCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFL 180

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            D ++Y   + GLC      +AFE L+    + + P  + ++++V  +  +G  T
Sbjct: 181 LDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 266/550 (48%), Gaps = 46/550 (8%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           NP  A  L    T      H+ H FH ++R    P L    + +L  +   K Y      
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLS-SFNHLLSGLAKIKHYS----- 86

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             V   Y +  +   + D    +N +  C    LC   +  +       +  +G  P++ 
Sbjct: 87  -QVFSLYNQMRLSGLSSDRCT-LNILLNC----LCNVNRLREGFAAFAGILRRGYSPNIV 140

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+I GL     +  A  +F  M + G   +VV Y  LI G    G+   A ++ + +
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 197 VMETSVY-----PNVVTYNVMINGLCKCGRFDECLEMWDRMK-----KNER-----EKDS 241
           + + S Y     PNV+TYN++++GLCK GR DE  ++++ MK      NE      + D 
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDM 260

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            T+   I  LCK G V  A+++   M+ESGI  D VTYN++I+GFC  G +    EL+  
Sbjct: 261 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 320

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KGC  +V+SYN+LI G  +  KV+EA+ ++  +       +  T+  L+ G+    +
Sbjct: 321 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI----F 376

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L               G++ DA  L + M  HG   N+YT    ++G  +   L  A+ L
Sbjct: 377 L--------------AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKL 422

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F E+        + + N LI+GLCK  +   A+   +++  +G +P+++TY+++I+G C+
Sbjct: 423 FTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCR 482

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             ++D A  L  +    G TPD+  YN L+ G   + K+E+ +QL   M +++  P+ +T
Sbjct: 483 EGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542

Query: 541 YNTLMDGLFK 550
            + ++D L K
Sbjct: 543 CSIVVDMLSK 552



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 247/516 (47%), Gaps = 40/516 (7%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A  F + +      P + S+  +++GL K        +++++M   G+ ++    NIL++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 179 GFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
                 +  R +E +     ++     PN+VTYN +I GLC   R  E   ++ RM+K  
Sbjct: 113 CLC---NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMV------ESGIFVDAVTYNAMIDGFCRAG 290
              D  TY + I GLC  GN+  A ++++EM+      E     + +TYN ++DG C+ G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 291 KIKECFELWEVMGRKGCL-----------NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           +  E  +L+E M  +G +           ++V++N+LI  L + GKV EA  +  ++ E 
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D  T+  LI G C  G LN A +                  L   M   GC+ +  
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARE------------------LFVSMPSKGCEPDVI 331

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           + N L+NG+ +  K+E A+ L+ EM   G  P V++Y++L+ G+    +  +A      M
Sbjct: 332 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 391

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
              G   +  TY + ++GLC++  +  A+KL  +     F  ++   N LI GLC AGK+
Sbjct: 392 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 451

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           E A +L+  +      PN+VTY  ++ G  + G  DKA  +   +      PDII+YN  
Sbjct: 452 ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 511

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++G    +++ +  + L+    + + P  IT  I+V
Sbjct: 512 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 220/457 (48%), Gaps = 34/457 (7%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            L+M ++  P++ ++N +++GL K   + +   ++++M+ +    D  T    ++ LC  
Sbjct: 58  HLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNV 117

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             +      +  ++  G   + VTYN +I G C   +I E   L+  M + GC  +VV+Y
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177

Query: 314 NILIRGLLENGKVDEAISI-WELLR-----EKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             LI+GL   G ++ A+ +  E+L      E NC  +  T+ ++++GLCK G  ++A Q+
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237

Query: 368 LNEVEEGG---------------------------EGRLADAASLVNRMDKHGCKLNAYT 400
             E++  G                           EG++ +A  L+  M + G   +  T
Sbjct: 238 FEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 297

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            NSL+ GF     L +A  LF  M  KGC P V+SYN LING  K  +  EA     EML
Sbjct: 298 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
             G +P++ITY  L+ G+  + K+D A KL       G   +   Y I + GLC    + 
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A++L++ +K  N    +   N L+DGL K G  + A E++  +  E   P++++Y I +
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            G C   ++  A   +      G  P  IT++ L+R 
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 121/223 (54%), Gaps = 16/223 (7%)

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           +A+  F  M R   +P++ S+N L++GL K++ + + +S   +M   G   D  T ++L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           N LC   ++          L++G++P++  YN LI GLC   ++ +A +L+  M+K  C 
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR------PDIISYNITLKGLCSCSRM 589
           P++VTY TL+ GL  TG+ + AL++   +L +  R      P++I+YNI + GLC   R 
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 590 SDAFEFL----------NDALCRGILPTTITWHILVRAVMNNG 622
            +A +            N+ L +G+ P  +T+++L+  +   G
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           E   C    LC+  + E A      L  +G +P+V +Y  +I+G  + G +  A  +  +
Sbjct: 436 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 495

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G   +++ YN L+ GF++        ++  R+  +  V P+ +T +++++ L K  
Sbjct: 496 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA-QKDVSPDAITCSIVVDMLSKDE 554

Query: 221 RFDECLEMWDR 231
           ++ ECL +  R
Sbjct: 555 KYQECLHLLPR 565


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 276/607 (45%), Gaps = 34/607 (5%)

Query: 5   AKRLLN-LLKAEKNPHTALALFDSATRE-----PGYAHSPHLFHHILRRLIDPKLVVHVS 58
           ++RLL+ LL A   PH A +L D   R      P  +  P +F  +L  L D  L+    
Sbjct: 94  SRRLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAV 153

Query: 59  RILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE----IFGCEAGILCR 112
           R L    +++   P +      ++    +N        +F+ +       F      LC+
Sbjct: 154 RALA--RVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCK 211

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           + +  +A+     +   G  PDV +Y ++I+G  K G+L     +  EM + G   +VV 
Sbjct: 212 QGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVT 271

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI+ F K G   +A   +  +     V  NVVT +  ++  CK G   E ++++ +M
Sbjct: 272 YNALINCFSKFGWIEKAYSYFGEM-KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           +      + FTY S + G CKAG ++ A  +  EMV  G+  + VTY  M+DG C+ GK+
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
               ++  +M R G   N + Y  LI G   N   + A+ +   ++ K    D + +G L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I GLCK       +Q L+E           A SL+++MD  G + N     ++M+ F +A
Sbjct: 451 IWGLCK-------VQKLDE-----------AKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K   A+ L  ++   G  P VV+Y  LI+GLCK     EA S   +M E G  P++  Y
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+G C+   +  A+ L  + + KG + D  +Y  LI G    G ++ A  L + M +
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                +L  Y   + G        +A  + + ++   + PD  +YN  ++       M +
Sbjct: 613 TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEE 672

Query: 592 AFEFLND 598
           A    N+
Sbjct: 673 ASSLQNE 679



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 237/474 (50%), Gaps = 19/474 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +FE     NV  +NI+ID   K+G+ + A+ ++ R+       P+VVTYN +I+G  KCG
Sbjct: 190 LFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRM-KAMGCSPDVVTYNSLIDGYGKCG 248

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             +E   +   M+K+    D  TY + I+   K G +E A   + EM   G+  + VT +
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
             +D FC+ G ++E  +L+  M  +G + N  +Y  L+ G  + G++D+AI + + +  +
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------EGRLAD-----A 382
               +  T+ V+++GLCK G +  A  +L+ +E  G             G   +     A
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+N M   G +L+     +L+ G  +  KL+ A  L  +M   G  P  V Y T+++ 
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
             K  +  EA + + ++ + G +P+++TY  LI+GLC++  I  A+    +  + G  P+
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V +Y  LI G C  G +  A+ L + M  +    + V Y +L+DG  K GD   A  +  
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            ++E  L+ D+  Y   + G C+ + M +A   L++ +  GI P    ++ L+R
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 211/435 (48%), Gaps = 28/435 (6%)

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           S  P+V  ++ +++ L   G  D+ +    R+++     ++ T C+ I  L  A N +G 
Sbjct: 130 SALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRT-CNHIL-LRLARNRQGG 185

Query: 261 --ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
              R++  +    +F    T+N +ID  C+ G++ E   L+  M   GC  +VV+YN LI
Sbjct: 186 LVRRLFEHLPAPNVF----TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLI 241

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            G  + G+++E   +   +R+  C AD  T+  LIN   K G++ KA     E++  G  
Sbjct: 242 DGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVM 301

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG + +A  L  +M   G   N +T  SL++G  +A +L++AI L
Sbjct: 302 ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             EM  +G  P VV+Y  +++GLCK  +   A   +  M   G K + + Y+ LI+G   
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFM 421

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +K  + AL L  +   KG   DV++Y  LI GLC   K+++A  L   M      PN V 
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y T+MD  FK G   +A+ + + I +  L+P++++Y   + GLC    + +A    +   
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541

Query: 601 CRGILPTTITWHILV 615
             G+ P    +  L+
Sbjct: 542 ELGLDPNVQVYTTLI 556



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 18/314 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV ++NI+I  L + G++ EA +++  ++   C+ D  T+  LI+G  K G L       
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE------ 251

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            EVE            LV+ M K GC  +  T N+L+N F +   +E A   F EM R G
Sbjct: 252 -EVE-----------LLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
               VV+ +T ++  CK     EA     +M  +G  P+  TY+ L++G C++ ++D A+
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  + + +G  P+V  Y +++ GLC  GKV  A  + S M++     N + Y TL+ G 
Sbjct: 360 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
           F   + ++AL++ N +  + +  D+  Y   + GLC   ++ +A   L+     G+ P T
Sbjct: 420 FMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNT 479

Query: 609 ITWHILVRAVMNNG 622
           + +  ++ A    G
Sbjct: 480 VIYTTIMDAFFKAG 493


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/629 (25%), Positives = 299/629 (47%), Gaps = 94/629 (14%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--------- 109
           ++ E++  + C   E    ++I  + +    D+AL++F +M E  GC   +         
Sbjct: 246 KVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKED-GCFPDVPTYTVLVAA 304

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +  +A +F   + E G++P+VY+Y  +I+   K G +   + +   M E+G+ ++
Sbjct: 305 FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364

Query: 170 VVCYNILIDGFFKKG---------DYMRAKEI------WERLV----------------- 197
           VV +N LIDG+ K+G         D M+  ++      +  L+                 
Sbjct: 365 VVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLN 424

Query: 198 --METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
              E  + PN+VTYN +I+GLCK    D    +   M K+    D  T+C+FI  LCK G
Sbjct: 425 KMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMG 484

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            VE A +V+  + E     +   Y A+IDG+C+A K  +   L++ M  +GC  N +++N
Sbjct: 485 KVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFN 544

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +L+ GL + GKV++A+S+ +++ + +      T+ +LI  + +    ++A   L+++   
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 +GRL +A  +V ++ + G  L+++  + L+N +    +L++A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLC--------------------------KVERFGE 451
             +   M   GC P+  +Y+ L+  L                           K+  F  
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                ++M+E+G  P++ TYS LI GLC+ + + +A +L     + G +P   ++N L+ 
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G  E+AL+L  +M + N + +L +Y  L+ GLF+ G+ +KA EI+  +L      
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844

Query: 572 DIISYNITLKGLC------SCSRMSDAFE 594
           D + + + L GL        CS++ D  E
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIME 873



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 295/602 (49%), Gaps = 30/602 (4%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           +P TAL  F     + G+ H+ H +  +L  L+    +     +   + I+ C    + A
Sbjct: 82  HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSM-IKSCVSSHE-A 139

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             V+     +     +L V    N +F     +L R    ++       +   G++P++ 
Sbjct: 140 RFVLNLLTHHEF---SLSV-TSYNRLFM----VLSRFGLIDELNCLFKDMLNDGVEPNLI 191

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           S+ T++N   K G+++ A A F  + + G   +   Y  LI G+ K  +   A +++E +
Sbjct: 192 SFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIM 251

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             E  +  N V+Y  +I+G C+ G+ DE LE++ +MK++    D  TY   +   C+ G 
Sbjct: 252 PQEGCLR-NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-VVSYNI 315
              A + + EMVE+GI  +  TY  +ID FC+ GK+ E  E+   M  KG ++ VV +N 
Sbjct: 311 ETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNA 370

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           LI G  + G +++AI + + ++      +S T+  LI G C+   +++A+ +LN++ E  
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYE-- 428

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                      N++       N  T N+L++G  +A  +++A  L   M + G  P   +
Sbjct: 429 -----------NKLSP-----NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT 472

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           +   I+ LCK+ +  +A+   + + EK  + +   Y+ LI+G C+++K   A  L  + L
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +G  P+   +N+L+ GL   GKVEDA+ L   M K +  P + TY  L++ + +  D D
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A    + ++    +P++++Y   +K  C   R+ +A E +      GIL  +  + +LV
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652

Query: 616 RA 617
            A
Sbjct: 653 NA 654



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 243/507 (47%), Gaps = 20/507 (3%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
            +A+  LN L        V SY  +   L + G +     +F +M   GVE N++ +N +
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           ++   K G+ + AK  +  L M+     +  TY  +I G CK     +  ++++ M +  
Sbjct: 197 VNAHCKIGNVVVAKAYFCGL-MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG 255

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
             ++  +Y + IHG C+ G ++ A  ++ +M E G F D  TY  ++  FC  GK  E  
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           + +E M   G   NV +Y +LI    + GK+DE + +   + EK   +       LI+G 
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G +  AI +L+ ++             +N++    C  N+ T N L+ GF +   ++
Sbjct: 376 CKRGMMEDAICVLDSMK-------------LNKV----CP-NSRTYNELICGFCRKKSMD 417

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L  +M     SP +V+YNTLI+GLCK      A+     M++ G+ PD  T+   I
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           + LC+  K++ A ++     +K    +  +Y  LI G C A K  DA  L+  M    C 
Sbjct: 478 DCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PN +T+N L+DGL K G  + A+ + + + +   +P + +Y I ++ +   S    A  F
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L+  +  G  P  +T+   ++A    G
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQG 624



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 207/434 (47%), Gaps = 10/434 (2%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R  + A R  + + + G  PD  ++   I+ L K G +  A  VF+ + E+  E N
Sbjct: 445 LCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y  LIDG+ K   +  A  +++R++ E   +PN +T+NV+++GL K G+ ++ + + 
Sbjct: 505 EFLYTALIDGYCKAEKFSDAHLLFKRMLFE-GCFPNSITFNVLLDGLRKEGKVEDAMSLV 563

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M K + +    TY   I  + +  + + A     +M+ SG   + VTY A I  +CR 
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ E  E+   +  +G L +   Y++L+      G++D A  +   + +  C     T+
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683

Query: 349 GVLINGLCKNGYLNKAIQI-LNE----VEEGGEGRLAD---AASLVNRMDKHGCKLNAYT 400
            +L+  L    Y  + + + LN     V+     ++AD      L  +M + GC  N  T
Sbjct: 684 SILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNT 743

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            + L+ G  +   L  A  LF  M   G SP+   +N+L++  CK+    EA   +  M+
Sbjct: 744 YSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMM 803

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           E      + +Y LL+ GL +    + A ++    L  G+  D  ++ +L+ GL   G V+
Sbjct: 804 EYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVD 863

Query: 521 DALQLYSNMKKRNC 534
           +  QL   M+K  C
Sbjct: 864 ECSQLRDIMEKTGC 877



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 47/232 (20%)

Query: 406 NGFIQASK------------LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           NGF++A++               A F+   ++    S +V SYN L   L +     E  
Sbjct: 116 NGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELN 175

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              K+ML  G +P++I+++ ++N  C+   + +A    C  ++ GF  D   Y  LI G 
Sbjct: 176 CLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGY 235

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C   ++ DA +++  M +  C+ N V+Y  L                             
Sbjct: 236 CKIHELGDAYKVFEIMPQEGCLRNEVSYTNL----------------------------- 266

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
                 + G C   ++ +A E        G  P   T+ +LV A    G  T
Sbjct: 267 ------IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/596 (26%), Positives = 280/596 (46%), Gaps = 34/596 (5%)

Query: 31  EPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           EPG AH   +F  +L+R  D   +  ++R L  +          VA+S+      N MP 
Sbjct: 42  EPGDAH--QVFDRLLKR-GDRASIFDLNRALSDV----ARASPAVAISLF-----NRMPR 89

Query: 91  KALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV--KS 148
                       +G   G   R  + + A   +  +   GL+ +     +   G +    
Sbjct: 90  AGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAG 149

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP-NVV 207
           G  +    V   M E G + ++  Y IL+ G        +A ++   +       P +VV
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 209

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            Y  +INGL + G+ D+   ++D M       D  TY S I  L K   ++ A +V+  M
Sbjct: 210 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 269

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
           V++G+  D + Y +++ G+C +GK KE   +++ M R G   +VV+Y  L+  L +NGK 
Sbjct: 270 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            EA  I++ L ++    DSTT+G L++G                     EG L +   L+
Sbjct: 330 TEARKIFDSLVKRGHKPDSTTYGTLLHGYAT------------------EGALVEMHDLL 371

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
           + M K G +L  +  N +M  + + +K++ A+ +F  M ++G +P +V+Y T+++ LC  
Sbjct: 372 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 431

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +A S    +  +G  P+++ ++ LI+GLC   K D   +L  + + +G   D   +
Sbjct: 432 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFF 491

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N ++  LC  G+V +A  L+  M +    PN  TYNTL+DG    G  D+A+++   ++ 
Sbjct: 492 NAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVF 551

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             ++P  ++YN  + G     R+ D    L +   +G+ P  +T+ +L++ +   G
Sbjct: 552 NGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 607



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 277/574 (48%), Gaps = 46/574 (8%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHIL-----RRLIDPKLVVHVSRILELIEIQK 68
           A  +P  A++LF+   R    + +P++  + +     RRL   +L +  + +  +I    
Sbjct: 73  ARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRL--GRLDLAFATVGRVITTGL 130

Query: 69  CYCPEDVALS----VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQ 115
            + P  +  S    +  A G+    D    V +RM E+ GC+  +         LC  + 
Sbjct: 131 RHEPNPLQSSSQGPLCTAGGRAMRMDI---VLRRMPEL-GCKPDLFSYTILLKGLCDDKT 186

Query: 116 FEKAKRFLNSLWE-KGLKP-DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            ++A   L+ + + KG  P DV +Y TVINGL++ G L  A ++FD M +RG   +VV Y
Sbjct: 187 SQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTY 246

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           + +I    K     +A +++ R+V +  V P+ + Y  +++G C  G+  E + ++ +M 
Sbjct: 247 SSIISALSKTQAMDKATQVFTRMV-KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC 305

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           ++  E D  TY + +  LCK G    A +++  +V+ G   D+ TY  ++ G+   G + 
Sbjct: 306 RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALV 365

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E  +L ++M +KG  L    +N+++    ++ KVDEA+ ++  +R++  N D   +G ++
Sbjct: 366 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 425

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           + LC                    GR+ DA S  N +   G   N     +L++G     
Sbjct: 426 DILCT------------------AGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCD 467

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           K +    L  EM  +G     + +N ++  LCK  R  EA +    M+  G +P+  TY+
Sbjct: 468 KWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 527

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+G C   K+D A+KL    +  G  P    YN +I+G    G++ED L L   M  +
Sbjct: 528 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 587

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
              P +VTY  L+ GLF+ G    A E++  +++
Sbjct: 588 GVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 14/308 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V++   L++ L        A  +FDS  +  G+      +  +L        +V +  +L
Sbjct: 313 VVTYTALMDYLCKNGKSTEARKIFDSLVKR-GHKPDSTTYGTLLHGYATEGALVEMHDLL 371

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRK 113
           +L+  +       +   ++ AY K++  D+AL VF  M +         +G    ILC  
Sbjct: 372 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 431

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG--DLLGALAVFDEMFERGVETNVV 171
            + + A    NSL  +GL P++  + T+I+GL      D +  LA   EM +RG+  + +
Sbjct: 432 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAF--EMIDRGICLDTI 489

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            +N ++    KKG  + AK +++ L++   + PN  TYN +I+G C  G+ DE +++   
Sbjct: 490 FFNAIMGNLCKKGRVIEAKNLFD-LMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGV 548

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  N  +    TY + I+G  + G +E    + REM   G+    VTY  ++ G  +AG+
Sbjct: 549 MVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 608

Query: 292 IKECFELW 299
                EL+
Sbjct: 609 TVAAKELY 616



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 46/301 (15%)

Query: 370 EVEEGGEGRL---ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
             ++GG  R     DA  + +R+ K G + + +  N  ++   +AS    AI LF  M R
Sbjct: 31  RTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPR 89

Query: 427 KGCS---PTVVSYNTLINGLCKVERFGEAYSFV--------------------------- 456
            G +   P + +Y  +I    ++ R   A++ V                           
Sbjct: 90  AGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAG 149

Query: 457 ----------KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTP-DVT 504
                     + M E G KPD+ +Y++L+ GLC  K    AL L       KG  P DV 
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 209

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y  +I+GL   G+++ A  L+  M  R   P++VTY++++  L KT   DKA +++  +
Sbjct: 210 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 269

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           ++  + PD I Y   + G CS  +  +A          G+ P  +T+  L+  +  NG S
Sbjct: 270 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329

Query: 625 T 625
           T
Sbjct: 330 T 330



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 154/348 (44%), Gaps = 29/348 (8%)

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           G  RA +  +  ++++ + ++G  +  S   L R L +  +   A++I    R     A 
Sbjct: 36  GRQRATEPGDAHQVFDRLLKRG--DRASIFDLNRALSDVARASPAVAISLFNRMPRAGAT 93

Query: 345 ST-----THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
           S      T+G++I G C+                   GRL  A + V R+   G +    
Sbjct: 94  SAAPNIATYGIVI-GCCRR-----------------LGRLDLAFATVGRVITTGLRHEPN 135

Query: 400 TCNSLMNGFI--QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
              S   G +     +      + + M   GC P + SY  L+ GLC  +   +A   + 
Sbjct: 136 PLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLH 195

Query: 458 EMLE-KGWKP-DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            M + KG  P D++ Y+ +INGL +  ++D A  L    L +G +PDV  Y+ +I  L  
Sbjct: 196 IMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 255

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
              ++ A Q+++ M K   +P+ + Y +L+ G   +G   +A+ I+  +    + PD+++
Sbjct: 256 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 315

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           Y   +  LC   + ++A +  +  + RG  P + T+  L+      GA
Sbjct: 316 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGA 363


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 269/528 (50%), Gaps = 34/528 (6%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIF 103
           IL RL  PK   H+     L  I     P     +VI  + + S+    L+V  +   +F
Sbjct: 105 ILYRLPSPKPSFHI-----LQPILHTTTP-----TVI--FNELSLARNRLNV--KTTLVF 150

Query: 104 GCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
                  C+ R+ ++A   LN + E  + P   +  ++++ L+K   +  A  V++EM +
Sbjct: 151 DLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVK 210

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
             +++++V +NI+I+   ++G + +AK+    + +   V PNVVTYN +ING C  G+F+
Sbjct: 211 MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEV-YGVKPNVVTYNTVINGYCLRGKFE 269

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
              +++  MK    + D +TY SFI  LCK   +E A  V  +++ESG+  +AVTYNA+I
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG C  G + + F   + M  +G + +V +YN+LI  L    +++EA  + + +REK   
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASL 385
            D  T+ + ING C+ G   KA+ + +E+ E                 G   R+++A   
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
             +  K G   +    N+L++G      ++ A  L KEM      P  V++NTL+ G C+
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  EA   + EM E+G KPD I+Y+ LI+G  +   +  AL++  + L  GF P +  
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLT 569

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
           YN LI G    G+ + A +L   M+ +   P+  TY  +++ + KT D
Sbjct: 570 YNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM-KTND 616



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 221/439 (50%), Gaps = 22/439 (5%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
            + ++++++  C+  + DE LE  + MK+NE    + T  S +  L K   ++ A  VY 
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL---WEVMGRKGCLNVVSYNILIRGLLE 322
           EMV+  I    VT+N MI+  CR GK K+  +     EV G K   NVV+YN +I G   
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKP--NVVTYNTVINGYCL 264

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            GK + A  I++ +++KN   D  T+   I+ LCK   + +A  +L ++ E G       
Sbjct: 265 RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     +G L  A +  + M   G   + +T N L++      ++E A  + KEM 
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG  P VV+YN  ING C+     +A S   EM+EK  +P + TY+ LI+   +  ++ 
Sbjct: 385 EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A +   + +++G  PD+ M+N LI G C  G ++ A QL   M     VP+ VT+NTLM
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            G  +    ++A ++ + + E  ++PD ISYN  + G      M DA E  ++ L  G  
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFD 564

Query: 606 PTTITWHILVRAVMNNGAS 624
           PT +T++ L++     G +
Sbjct: 565 PTLLTYNALIQGYSKIGEA 583



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 218/431 (50%), Gaps = 20/431 (4%)

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           ++E +V + ++  ++VT+N+MIN LC+ G++ +  +    M+    + +  TY + I+G 
Sbjct: 204 VYEEMV-KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           C  G  E A ++++ M +  +  D  TYN+ I   C+  +I+E   +   +   G + N 
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+YN LI G    G +D+A +  + +  +   A   T+ +LI+ L    +L         
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHAL----FL--------- 369

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                E R+ +A  ++  M + G + +  T N  +NG+ +    + A+ LF EM  K   
Sbjct: 370 -----EKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIR 424

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           PTV +Y +LI+   K  R  EA    K+ +++G  PD+I ++ LI+G C +  ID A +L
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +       PD   +N L+ G C   KVE+A +L   MK+R   P+ ++YNTL+ G  K
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            GD   ALE+++ +L     P +++YN  ++G         A E L +   +GI P   T
Sbjct: 545 RGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604

Query: 611 WHILVRAVMNN 621
           +  ++ A+  N
Sbjct: 605 YLYVIEAMKTN 615



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 96/191 (50%)

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           T + ++ L++  C+  +  EA   +  M E    P   T + L++ L +  KI MA  + 
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + ++      +  +NI+I+ LC  GK + A     +M+     PN+VTYNT+++G    
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A +I+  + ++ L+PD  +YN  +  LC   R+ +A   L   L  G++P  +T+
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 612 HILVRAVMNNG 622
           + L+    N G
Sbjct: 326 NALIDGCCNKG 336


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 251/501 (50%), Gaps = 22/501 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGD--LLGALAVFDEMFERGVETNVVCYNILIDGF 180
            N L        +  +  ++  LVKS +     A+++   +   G+  ++  +NILI+ +
Sbjct: 54  FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
               +   A  +  + +++    P+ +T+N +I GLC  G+  E L   D +       D
Sbjct: 114 CHMAEMNFAFSMMAK-ILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLD 172

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW- 299
            F+Y + I+GLCK G    A ++ R++    + ++ V YN +ID  C+   + + +EL+ 
Sbjct: 173 QFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYS 232

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +++ +K   +VV+++ LI G    G+++EA  ++  +  KN N D  T  +L++ LCK  
Sbjct: 233 QMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCK-- 290

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           EG L  A +++  M K G   N  T +SLM+G+   +++  A  
Sbjct: 291 ----------------EGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKH 334

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +   +S+ G +P   SY T+ING CK++   EA S   +M  KG  PD +TY+ LI+GLC
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S +I  A +L  +    G   ++  YN LI  LC    V+ A+ L   +K +   P++ 
Sbjct: 395 KSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMY 454

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           T+N L+ GL K G    A +++  +L +    +  +YNI + GLC      +A   L+  
Sbjct: 455 TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM 514

Query: 600 LCRGILPTTITWHILVRAVMN 620
              GI+P  +T+  L++A+ +
Sbjct: 515 DDNGIIPDAVTYETLIQALFH 535



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 264/540 (48%), Gaps = 22/540 (4%)

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSL 126
           Q  + P ++ +  + +   + +  K        N+I G  + +      +  A      L
Sbjct: 37  QFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILG--SLVKSNNNHYPTAISLSRRL 94

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
              G+ PD++++  +IN      ++  A ++  ++ + G E + + +N LI G    G  
Sbjct: 95  EFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKV 154

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A    +  V+    + +  +Y  +INGLCK G     L+M  ++     + +   Y +
Sbjct: 155 KEALHFHDH-VLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I  LCK   V  A  +Y +M+   I  D VT++A+I GFC  G+++E F L+  M  K 
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +  ++NIL+  L + G +  A ++  ++ ++    +  T+  L++G C    +NKA 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            +LN + + G                     NA++  +++NGF +   ++ A+ LF +M 
Sbjct: 334 HVLNTISQMGAAP------------------NAHSYCTMINGFCKIKMVDEALSLFNDMQ 375

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG +P  V+YN+LI+GLCK  R   A+  V EM + G   ++ TY+ LI+ LC++  +D
Sbjct: 376 FKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVD 435

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A+ L  +   +G  PD+  +NILI+GLC  G++++A  ++ ++  +    N  TYN ++
Sbjct: 436 QAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMV 495

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +GL K G  D+A  + + + +  + PD ++Y   ++ L        A + L + + R ++
Sbjct: 496 NGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 227/476 (47%), Gaps = 22/476 (4%)

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD--YMRAKEIWERLVMETSVYPNVV 207
           D+   ++ F+ +      ++++ +N ++    K  +  Y  A  +  RL     + P++ 
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFH-GITPDIF 104

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T+N++IN  C     +    M  ++ K   E D+ T+ + I GLC  G V+ A   +  +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           +  G  +D  +Y  +I+G C+ G+ +   + L ++ G+   +NVV YN +I  L ++  V
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A  ++  +  K  + D  T   LI G C                    G+L +A  L 
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCI------------------VGQLEEAFGLF 266

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M       + YT N L++   +   L+ A  +   M ++G  P VV+Y++L++G C V
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  +A   +  + + G  P+  +Y  +ING C+ K +D AL L      KG  PD   Y
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N LI GLC +G++  A +L   M       N+ TYN L+D L K    D+A+ +   I +
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + ++PD+ ++NI + GLC   R+ +A +   D L +G      T++I+V  +   G
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEG 502


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 244/484 (50%), Gaps = 19/484 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A++ F+ M        ++ +N ++D F K   Y  A  +  RL ++  + P+++T N++I
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILI 101

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+      +  ++ K     D+ T  + I GLC  G V+ A   + +++  G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           ++ V+Y  +I+G C+ G  +   +L + + GR    NVV Y+ +I  L +   V EA  +
Sbjct: 162 LNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGL 221

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           +  +  K  +AD  T+  LI G C  G L +AI +LNE+                     
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           EG++ +A S++  M K   K +  T ++LM+G+    +++ A  +F  MS  G +P V +
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LING CK +   EA +  KEM +K   P ++TYS LI+GLC+S +I     L  +  
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMH 401

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +G   +V  Y+ LI GLC  G ++ A+ L++ MK +   PN  T+  L+DGL K G   
Sbjct: 402 DRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 461

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A E++  +L +    ++ +YN+ + G C    + +A   L+     G +P  +T+ I++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521

Query: 616 RAVM 619
            A+ 
Sbjct: 522 IALF 525



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 221/443 (49%), Gaps = 22/443 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   Q       L  + ++G  PD  +  T+I GL   G +  AL   D++  +G + N
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V Y  LI+G  K GD   A ++ +++    +  PNVV Y+ +I+ LCK     E   ++
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLT-KPNVVMYSTIIDALCKYQLVSEAYGLF 222

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D  TY + I+G C  G ++ A  +  EMV   I  +  TYN ++D  C+ 
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 290 GKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           GK+KE   +  VM  K C+  +V++Y+ L+ G     +V +A  ++  +       D  T
Sbjct: 283 GKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +LING CKN  +++A+ +  E                  M +        T +SL++G
Sbjct: 342 YTILINGFCKNKMVDEALNLFKE------------------MHQKNMVPGIVTYSSLIDG 383

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             ++ ++     L  EM  +G    V++Y++LI+GLCK      A +   +M ++G +P+
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             T+++L++GLC+  ++  A ++    L KG+  +V  YN++I G C  G +E+AL + S
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLS 503

Query: 528 NMKKRNCVPNLVTYNTLMDGLFK 550
            M+   C+P+ VT+  ++  LFK
Sbjct: 504 KMEDNGCIPDAVTFEIIIIALFK 526



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 208/423 (49%), Gaps = 25/423 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P ++ +N +++   K   +   + +  R++    + D  T    I+  C  G +     V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
             ++++ G   D VT N +I G C  G++K+     + +  +G  LN VSY  LI G+ +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G    AI + + +  +    +   +  +I+ LCK        Q+++E           A
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCK-------YQLVSE-----------A 218

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M   G   +  T ++L+ GF    KL+ AI L  EM  K  +P V +YN L++ 
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK  +  EA S +  ML+   KPD+ITYS L++G     ++  A  +       G TPD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           V  Y ILI+G C    V++AL L+  M ++N VP +VTY++L+DGL K+G   +   +W+
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG---RIPYVWD 395

Query: 563 HI--LEERLRP-DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            I  + +R +P ++I+Y+  + GLC    +  A    N    +GI P T T+ IL+  + 
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455

Query: 620 NNG 622
             G
Sbjct: 456 KGG 458



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 232/491 (47%), Gaps = 47/491 (9%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVV---------HVSRILELIEI-----QKC 69
           + DS  +   Y+ +  L H +  + I P L+          H+ +I     +     ++ 
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 70  YCPEDVALSVI--------QAYGKNSMPDKALDVFQRMNEI-FGCEAGILCRKRQFEKAK 120
           Y P+ V L+ +        Q        DK L    ++N++ +G     +C+      A 
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + L  +  +  KP+V  Y T+I+ L K   +  A  +F EM  +G+  +VV Y+ LI GF
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
             +G    A  +   +V++T + PNV TYN++++ LCK G+  E   +   M K   + D
Sbjct: 245 CIEGKLKEAIGLLNEMVLKT-INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY + + G      V+ A+ V+  M   G+  D  TY  +I+GFC+   + E   L++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M +K  +  +V+Y+ LI GL ++G++     + + + ++   A+  T+  LI+GLCKNG
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNG 423

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
           +L++AI + N++++ G                  GRL DA  +   +   G  LN YT N
Sbjct: 424 HLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE- 461
            +++G  +   LE A+ +  +M   GC P  V++  +I  L K +  G    F K++ E 
Sbjct: 484 VMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEI 543

Query: 462 ----KGWKPDM 468
               KG  P +
Sbjct: 544 VEHKKGETPSI 554



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 173/368 (47%), Gaps = 19/368 (5%)

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
           NV+ A   +  M+        + +N ++D F +         L   +  KG   ++++ N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ILI      G++    S+   + ++    D+ T   LI GLC  G + KA+         
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH-------- 150

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                       +++   G +LN  +  +L+NG  +      AI L +++  +   P VV
Sbjct: 151 ----------FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVV 200

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
            Y+T+I+ LCK +   EAY    EM  KG   D++TYS LI G C   K+  A+ L  + 
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + K   P+V  YNIL+  LC  GKV++A  + + M K    P+++TY+TLMDG F   + 
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KA  ++N +    + PD+ +Y I + G C    + +A     +   + ++P  +T+  L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 615 VRAVMNNG 622
           +  +  +G
Sbjct: 381 IDGLCKSG 388



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 31/328 (9%)

Query: 244  YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
            +  F HG+ + G +  AER    +   G ++  + +N M   +  A  +    EL  +  
Sbjct: 906  HVGFEHGVVRGG-LAMAER---GVTSVGAYI-RIPHNPM-KHYSTAVSLSHRLELKGIQP 959

Query: 304  RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
                 ++ + NILI      G++    SI   + ++  + D+ T   LINGLC  G +NK
Sbjct: 960  -----DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 364  AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
            A+                     +++   G +LN  +  +L+NG  +      AI L ++
Sbjct: 1015 ALH------------------FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK 1056

Query: 424  MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            +  +   P VV YNT+I+ LCK +   +AY    EM  KG   D++TY+ LI G C   K
Sbjct: 1057 IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116

Query: 484  IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK--VEDALQLYSNMKKRNCVPNLVTY 541
            +  A+ L  + + K   P+V  YNIL+  LC  GK  ++++L + S M+   C  N VT+
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 542  NTLMDGLFKTGDCDKALEIWNHILEERL 569
              ++  LF+  + DK  ++ + ++   L
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 4/261 (1%)

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            + +  A    + L  KG++PD+++   +IN     G +    ++  ++ +RG   + + +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
              LI+G   KG   +A    ++L+ +     N V+Y  +ING+CK G     +++  ++ 
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQ-GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                + D   Y + I  LCK   V  A  ++ EM   GI  D VTYN +I GFC  GK+K
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 294  ECFELWEVMGRKGC-LNVVSYNILIRGLLENGK--VDEAISIWELLREKNCNADSTTHGV 350
            E   L   M  K    NV +YNIL+  L + GK  +DE++S+   + +  C A++ T  +
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 351  LINGLCKNGYLNKAIQILNEV 371
            +I+ L +    +K  ++L+E+
Sbjct: 1179 IISALFEKDENDKVEKLLHEM 1199



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 110/206 (53%)

Query: 417  AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
            A+ L   +  KG  P + + N LIN  C + +    +S + ++L++G+ PD IT++ LIN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 477  GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            GLC   +++ AL    + L +GF  +   Y  LI+G+C  G    A++L   +  R   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 537  NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
            ++V YNT++D L K     KA  ++  +  + +  D+++YN  + G C   ++ +A   L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 597  NDALCRGILPTTITWHILVRAVMNNG 622
            N  + + I P   T++ILV A+   G
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEG 1150



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 135/274 (49%), Gaps = 2/274 (0%)

Query: 348  HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            HGV+  GL        ++     +        + A SL +R++  G + + +T N L+N 
Sbjct: 911  HGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINC 970

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            F    ++     +  ++ ++G  P  +++ TLINGLC   +  +A  F  ++L +G++ +
Sbjct: 971  FCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLN 1030

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             ++Y  LING+C+      A+KL  +   +   PDV MYN +I  LC    V  A  L+ 
Sbjct: 1031 QVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFF 1090

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
             M  +    ++VTYNTL+ G    G   +A+ + N ++ + + P++ +YNI +  LC   
Sbjct: 1091 EMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150

Query: 588  R--MSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            +  + ++   L+     G     +T+ I++ A+ 
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
             C   Q       L  + ++G  PD  ++ T+INGL   G +  AL   D++  +G + N
Sbjct: 971  FCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLN 1030

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
             V Y  LI+G  K GD   A ++  ++    +  P+VV YN +I+ LCK     +   ++
Sbjct: 1031 QVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT-KPDVVMYNTIIDALCKHQLVSKAYGLF 1089

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
              M       D  TY + I+G C  G ++ A  +  +MV   I  +  TYN ++D  C+ 
Sbjct: 1090 FEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKE 1149

Query: 290  GK--IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
            GK  + E   +   M   GC  N V++ I+I  L E    DE   + +LL E
Sbjct: 1150 GKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEK---DENDKVEKLLHE 1198



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 4/187 (2%)

Query: 90   DKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
            DK L    ++N++ +G     +C+      A + L  +  +  KPDV  Y T+I+ L K 
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 149  GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
              +  A  +F EM  +G+  +VV YN LI GF   G    A  +  ++V++T + PNV T
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT-INPNVRT 1138

Query: 209  YNVMINGLCKCGR--FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            YN++++ LCK G+   DE L M  +M+ N  + ++ T+   I  L +    +  E++  E
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHE 1198

Query: 267  MVESGIF 273
            M+  G+ 
Sbjct: 1199 MIARGLL 1205



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 78/173 (45%)

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           ++   +A S    ML     P +I ++ +++   + K    A+ L  +   KG  PD+  
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
            NILI+  C  G++     + + + KR   P+ VT NTL+ GL   G   KAL   + +L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +  + + +SY   + G+C       A + L     R   P  + +  ++ A+
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDAL 209



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 52/104 (50%)

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S   V+DA+  ++ M      P ++ +N ++D   K      A+ + + +  + ++PD+I
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + NI +   C   +++  F  L   L RG  P T+T + L++ +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGL 139


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 242/505 (47%), Gaps = 31/505 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR   + ++   L ++  KG  PDV     +I G     ++  A+ V  E+ E+  + +V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN LI+GF K      A  + +R+       P+ VTYN+MI  LC  G+ D  L++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           ++  +  +    TY   I      G V+ A ++  EM+  G+  D  TYN +I G C+ G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +   FE+   +  KG   +V+SYNIL+R LL  GK +E   +   +  + C+ +  T+ 
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +LI  LC++G + +A+ +L  ++E G                 EGRL  A   +  M   
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  +    N+++    +  K + A+ +F ++   GCSP   SYNT+ + L        A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + EM+  G  PD ITY+ +I+ LC+   +D A +L        F P V  YNI++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C A ++EDA+ +  +M    C PN  TY  L++G+   G   +A+E+ N +    +R D
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL----VRID 573

Query: 573 IISYNITLKGLCSCSRMSDAFEFLN 597
            IS         S  R+   F  LN
Sbjct: 574 AISE-------YSFKRLHRTFPLLN 591



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 214/455 (47%), Gaps = 20/455 (4%)

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G+Y+ +  + E +V +    P+V+    +I G        + + + + ++K   + D 
Sbjct: 101 RSGNYIESLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F Y + I+G CK   ++ A RV   M       D VTYN MI   C  GK+    ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +    C   V++Y ILI   +  G VDEA+ + + +  +    D  T+  +I G+CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +++A +++  +E  G                 +G+  +   L+ +M    C  N  T + 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+    +  K+E A+ L K M  KG +P   SY+ LI   C+  R   A  F++ M+  G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD++ Y+ ++  LC++ K D AL++  +  + G +P+ + YN +   L S+G    AL
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            +   M      P+ +TYN+++  L + G  D+A E+   +      P +++YNI L G 
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           C   R+ DA   L   +  G  P   T+ +L+  +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 226/453 (49%), Gaps = 28/453 (6%)

Query: 109 ILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ILC K        R   KA R +  + EK  +PDV++Y  +ING  K   +  A  V D 
Sbjct: 125 ILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDR 183

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M  +    + V YNI+I     +G    A ++  +L+ + +  P V+TY ++I      G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEG 242

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE L++ D M     + D FTY + I G+CK G V+ A  + R +   G   D ++YN
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYN 302

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++      GK +E  +L   M  + C  NVV+Y+ILI  L  +GK++EA+++ +L++EK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               D+ ++  LI   C+ G L+ AI+ L  +   G                  G+   A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +  ++ + GC  N+ + N++ +    +     A+ +  EM   G  P  ++YN++I+ 
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+     EA+  + +M    + P ++TY++++ G C++ +I+ A+ +    +  G  P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
            T Y +LI G+  AG   +A++L +++ + + +
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 237/480 (49%), Gaps = 42/480 (8%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRILELIEIQKC 69
           L +F  + R   Y  S HL   ++R+  +P +++            ++ + + ++EI + 
Sbjct: 93  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152

Query: 70  YCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           +   DV    ++I  + K +  D A  V  RM           +    G LC + + + A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            + LN L     +P V +Y  +I   +  G +  AL + DEM  RG++ ++  YN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K+G   RA E+   L ++ S  P+V++YN+++  L   G+++E  ++  +M   + + 
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGS-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY   I  LC+ G +E A  + + M E G+  DA +Y+ +I  FCR G++    E  
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           E M   GCL ++V+YN ++  L +NGK D+A+ I+  L E  C+ +S+++  + + L  +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G   +A+ ++ E                  M  +G   +  T NS+++   +   ++ A 
Sbjct: 452 GDKIRALHMILE------------------MMSNGIDPDEITYNSMISCLCREGMVDEAF 493

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M      P+VV+YN ++ G CK  R  +A + ++ M+  G +P+  TY++LI G+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 193/391 (49%), Gaps = 17/391 (4%)

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           H  C++GN   +  +   MV  G   D +    +I GF     I +   + E++ + G  
Sbjct: 97  HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP 156

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +YN LI G  +  ++D+A  + + +R K+ + D+ T+ ++I  LC  G L+ A+++L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 369 NEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           N++                     EG + +A  L++ M   G K + +T N+++ G  + 
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++ A  + + +  KG  P V+SYN L+  L    ++ E    + +M  +   P+++TY
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S+LI  LC+  KI+ A+ L     +KG TPD   Y+ LI   C  G+++ A++    M  
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
             C+P++V YNT++  L K G  D+ALEI+  + E    P+  SYN     L S      
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   + + +  GI P  IT++ ++  +   G
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREG 487


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 155/596 (26%), Positives = 277/596 (46%), Gaps = 34/596 (5%)

Query: 58  SRILELIEIQKCYCPEDVALS---VIQAYGKNSMPDKALDVFQRMN------EIFGCEAG 108
           +R LEL      + P     +    I  +GK+    KAL  ++ M       ++    A 
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457

Query: 109 I--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           +  L +  +   AKR  + L   G+ PD  +Y  +I    K+ +   A+ +F EM E   
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDE 224
             +V+  N LID  +K G   R  E W+    + E ++ P   TYN ++ GL + G+  E
Sbjct: 518 APDVLAMNSLIDMLYKAG---RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            +++ + M  N    +  TY + +  LCK G V  A  +   M  +G   D  +YN ++ 
Sbjct: 575 VMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMY 634

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI-SIWELLREKNCNA 343
           G  + G++ E F ++  M +    +  +   ++   + +G + EA+ ++ E + + +   
Sbjct: 635 GLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D ++   L+ G+ K     K+I+    +   G                       A  LV
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELV 754

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
            + +  G  L   + N+L+ G +    ++ A  LF EM R GC P   +Y+ +++ + K 
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +     +EM  KG+K   +TY+ +I+GL +SK +D A+ L  Q + +GF+P    Y
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L+ GL   G +EDA  L+  M +  C PN   YN L++G    GD +K  E++  ++E
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + PDI SY + +  LC+  R++D   +       G+ P  IT+++L+  +  +G
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSG 990



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 278/613 (45%), Gaps = 53/613 (8%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
           A  +P  AL LF S  R+P   H+    +++L  +     V  V+++ +L++ Q      
Sbjct: 77  AAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQ------ 130

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
                +I+A          +  F  +    G E G+         A   L  + E G+  
Sbjct: 131 -----IIKA---------NVGTFCTVFGAVGVEGGL-------RSAPVALPVMKEAGIVL 169

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+Y  +I  LVKSG    A+ V+  M   GV   V  Y++L+  F K+    R  E  
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKR----RDAETV 225

Query: 194 ERLVMET---SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
             L+ E     V PNV +Y + I  L + GR +E   +  +M++   + D  T    I  
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           LC AG +  A+ V+ +M  S    D VTY  ++D    +G  +   E+W  +   G   N
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VVSY   +  L + G+VDEA+ +++ +++K       ++  LI+G  K    N+A++   
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALE--- 402

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                          L N M+ HG   N YT    +N   ++ +   A+  ++ M  KG 
Sbjct: 403 ---------------LFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGI 447

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++   D A+K
Sbjct: 448 VPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMK 507

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + ++    PDV   N LI  L  AG+  +A +++  +K+ N  P   TYNTL+ GL 
Sbjct: 508 IFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLG 567

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           + G   + +++   +      P+II+YN  L  LC    ++ A + L      G +P   
Sbjct: 568 REGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627

Query: 610 TWHILVRAVMNNG 622
           +++ ++  ++  G
Sbjct: 628 SYNTVMYGLVKEG 640



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 272/603 (45%), Gaps = 65/603 (10%)

Query: 72   PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
            P+++  ++ I+   K S  D+A+ +F  M E               +L +  +  +A + 
Sbjct: 484  PDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKI 543

Query: 123  LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
               L E  L+P   +Y T++ GL + G +   + + + M       N++ YN ++D   K
Sbjct: 544  FYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCK 603

Query: 183  KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             G+   A ++   + M   + P++ +YN ++ GL K GR DE   M+ +MKK     D  
Sbjct: 604  NGEVNYALDMLYSMTMNGCM-PDLSSYNTVMYGLVKEGRLDEAFWMFCQMKK-VLAPDYA 661

Query: 243  TYCSFIHGLCKAGNVEGAERVYREMV---------------------------------- 268
            T C+ +    ++G ++ A    RE +                                  
Sbjct: 662  TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAEN 721

Query: 269  --ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGK 325
               SG+ +D +  + +I  FC+  +     EL +     G  L   SYN LI GL++   
Sbjct: 722  IASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781

Query: 326  VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
            +D A  ++  ++   C+ D  T+ ++++ + K+  +   ++I  E+   G          
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 376  -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                      L +A +L  ++   G      T   L++G ++   +E+A  LF EM   G
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            C P    YN L+NG        +     + M+E+G  PD+ +Y+++I+ LC   +++  L
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 489  KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
                Q    G  PD+  YN+LIHGL  +G++E+AL LY++M+K+   PNL TYN+L+  L
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 549  FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             K G   +A +++  +L +  +P++ +YN  ++G        +AF      +  G  P +
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 609  ITW 611
             T+
Sbjct: 1082 STY 1084



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 178/372 (47%), Gaps = 24/372 (6%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
             C+ ++   A   +      G+     SY  +I GLV    +  A  +F EM   G + +
Sbjct: 741  FCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWE-RLVMETSVYPNV-VTYNVMINGLCKCGRFDECLE 227
               Y++++D     G  MR +++ + +  M    Y +  VTYN +I+GL K    DE + 
Sbjct: 801  EFTYHLILDAM---GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 857

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            ++ ++          TY   + GL K GN+E AE ++ EM+E G   +   YN +++G+ 
Sbjct: 858  LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917

Query: 288  RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             AG  ++  EL+E M  +G   ++ SY ++I  L  +G++++ +S ++ L +     D  
Sbjct: 918  IAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            T+ +LI+GL                  G  GRL +A SL N M+K G   N YT NSL+ 
Sbjct: 978  TYNLLIHGL------------------GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
               +A K   A  +++E+  KG  P V +YN LI G         A++    M+  G +P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079

Query: 467  DMITYSLLINGL 478
            +  TY  L N +
Sbjct: 1080 NSSTYMQLPNQM 1091


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 267/553 (48%), Gaps = 52/553 (9%)

Query: 52  KLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILC 111
           +L++ ++R L + E+++ Y      + V   Y  N+M    ++ + +M  I         
Sbjct: 184 ELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTM----VNAYSKMGNIV-------- 231

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
                 +A  +++ +++ GL PD ++Y ++I G  ++ D+  A  VF+ M  +G   N V
Sbjct: 232 ------EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEV 285

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  +I G  + G       +++++  E   YP V TY V+I+ L    R  E +++++ 
Sbjct: 286 SYTTIIHGLCEAGRIDEGISLFKKM-REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNE 344

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++   E +  TY   +  +CK   ++ + R+  EM+E G+    VTYNA+I G+C  G+
Sbjct: 345 MRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR 404

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I+   E+  +M    C  N  +YN LI G  +   V +A+++   + E        T+  
Sbjct: 405 IEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI+  CK G+ + A ++L+ ++E G                   R+ +A  L N + + G
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG 524

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            K N     +L++G  +A K++ AI L + M  + C P   +YN+LI G+CK  +  E  
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           S V+ M + G KP + TY++LI  + +    D A ++  Q +  G  PDV  Y   IH  
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG---------------DCDKAL 558
           C++G V++A  + + M +   +P+ +TY  L+    + G                CD + 
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704

Query: 559 EIWNHILEERLRP 571
            IWN+++  +  P
Sbjct: 705 PIWNNLIWYKASP 717



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 226/469 (48%), Gaps = 53/469 (11%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + PN+ T N M+N   K G   E      ++ +     DSFTY S I G C+  +V  A 
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGL 320
           +V+  M   G   + V+Y  +I G C AG+I E   L++ M    C   V +Y ++I  L
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
             N +  E + ++  +RE++C  +  T+ V+++ +CK   L+++ +ILNE+ E G     
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                       EGR+  A  ++  M+ + C+ N  T N L+ GF +   +  A+ L  +
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M     +P++V+YN+LI+  CK   F  AY  +  + E G  PD  TYS+ I+ LC+SK+
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ++ A  L     +KG   +  MY  LI G C AGK+++A+ L   M   +C+PN  TYN+
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 544 LMDG-----------------------------------LFKTGDCDKALEIWNHILEER 568
           L+ G                                   + + GD D A  ++N ++   
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +PD+ +Y   +   C+   + +A   +   +  G++P ++T+ +L+ A
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 190/412 (46%), Gaps = 59/412 (14%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSF-------TYCSFIHGLCKAGNVEGAERV 263
           + I+ +  C   D+   + D +++  R+ +         +Y   +  L +   ++  +RV
Sbjct: 142 IRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRV 201

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLEN 323
           Y EM+   I  +  T N M++ + + G                  N+V  N+ +  + + 
Sbjct: 202 YTEMLNDMIVPNIYTLNTMVNAYSKMG------------------NIVEANLYVSKIFQA 243

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G                 + DS T+  LI G C+N  +N A ++ N              
Sbjct: 244 G----------------LSPDSFTYTSLILGYCRNNDVNSAYKVFN-------------- 273

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                M   GC+ N  +  ++++G  +A +++  I LFK+M    C PTV +Y  +I+ L
Sbjct: 274 ----MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
              +R  E      EM E+  +P++ TY+++++ +C+ +K+D + ++  + ++KG  P V
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN LI G C  G++E AL++   M+  NC PN  TYN L+ G  K     KA+ + + 
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +LE +L P +++YN  +   C       A++ L+     G++P   T+ + +
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 125/245 (51%), Gaps = 1/245 (0%)

Query: 379 LADAASLVNRMDKH-GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           L D    +NR D     KL+  + N L+    +   ++    ++ EM      P + + N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           T++N   K+    EA  +V ++ + G  PD  TY+ LI G C++  ++ A K+      K
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   +   Y  +IHGLC AG++++ + L+  M++ +C P + TY  ++  LF      + 
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           ++++N + E    P++ +Y + +  +C   ++ ++   LN+ + +G++P+ +T++ L+R 
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 618 VMNNG 622
               G
Sbjct: 399 YCEEG 403


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 252/529 (47%), Gaps = 58/529 (10%)

Query: 150 DLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           ++L  ++ FDE+ E  G   N  CY+ L+    K      A   + R+  +  V   ++ 
Sbjct: 139 EMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVV-GMID 197

Query: 209 YNVMINGLCKCGRFDECLEMWD-RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           Y  ++N LCK G + E  EM+  ++ K     DS    S + G C+  N+  A +V+  M
Sbjct: 198 YRTIVNALCKNG-YTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLM 256

Query: 268 VESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
              G    ++V+Y+ +I G C  G+++E F L + MG KGC  +  +Y +LI+ L + G 
Sbjct: 257 SREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
           +D+A ++++ +  + C  +  T+ VLI+GLC++G + +A  +  ++ + G          
Sbjct: 317 IDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 376 -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                  +GR+  A  L+  M+K  CK N  T N LM G  +  K   A+ L K M   G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            SP +VSYN LI+GLC+      AY  +  M     +PD +T++ +IN  C+  K D+A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVAS 496

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA-------------------------- 522
                 L+KG + D      LI G+C+ GK  DA                          
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDML 556

Query: 523 ---------LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
                    L +   + K   VP++VTY TL+DGL ++GD   +  +   +      P++
Sbjct: 557 SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNV 616

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             Y I + GLC   R+ +A + L+     G+ P  +T+ ++V+  +NNG
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 249/493 (50%), Gaps = 20/493 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV-ET 168
           LC+    E A+ F+  + + G   D +   +++ G  +  +L  AL VFD M   G    
Sbjct: 205 LCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAP 264

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V Y+ILI G  + G    A  + +++  E    P+  TY V+I  LC  G  D+   +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D M     + +  TY   I GLC+ G +E A  V R+MV+ GIF   +TYNA+I+G+C+
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++   FEL  VM ++ C  NV ++N L+ GL   GK  +A+ + + + +   + D  +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           + VLI+GLC+ G++N A ++L  +                     +G+   A++ +  M 
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G  L+  T  +L++G     K  +A+F+ + + +     T  S N +++ L K  +  
Sbjct: 504 RKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLK 563

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           E  + + ++ + G  P ++TY+ L++GL +S  I  + ++       G  P+V  Y I+I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIII 623

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC  G+VE+A +L S M+     PN VTY  ++ G    G  D+ALE    ++E    
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683

Query: 571 PDIISYNITLKGL 583
            +   Y+  L+G 
Sbjct: 684 LNDRIYSSLLRGF 696



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 256/551 (46%), Gaps = 55/551 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E+A    + + EKG +P   +Y  +I  L   G +  A  +FDEM  RG + N
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPN 335

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y +LIDG  + G    A  +  ++V +  ++P+V+TYN +ING CK GR     E+ 
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKD-GIFPSVITYNALINGYCKDGRVVPAFELL 394

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+K   + +  T+   + GLC+ G    A  + + M+++G+  D V+YN +IDG CR 
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454

Query: 290 GKIKECFELWEVMG----RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           G +   ++L   M        CL   ++  +I    + GK D A +   L+  K  + D 
Sbjct: 455 GHMNVAYKLLTSMNSFDLEPDCL---TFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL--------- 396
            T   LI+G+C  G    A+ IL  + +        + +++  M   GCKL         
Sbjct: 512 VTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK 571

Query: 397 --------NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
                   +  T  +L++G I++  +  +  + + M   GC P V  Y  +INGLC+  R
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGR 631

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA   +  M + G  P+ +TY++++ G   + K+D AL+     +++G+  +  +Y+ 
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRN--CVPNLVTYNTLMDG------------LFKTGDC 554
           L+ G   + K          +++ +  C+  L++    + G            L K G  
Sbjct: 692 LLRGFVLSQK---------GIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRT 742

Query: 555 DKALEIWNHILEERLRPDII---SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           D++    N +++  L+  +    + +I ++  CS  + +   E +   L  G +P+  ++
Sbjct: 743 DES----NGLVQTILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSF 798

Query: 612 HILVRAVMNNG 622
            ++++ +   G
Sbjct: 799 CLVIQGLKKEG 809



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 275/626 (43%), Gaps = 79/626 (12%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N   AL +FD  +RE   A +   +  ++  L +   +     + + +  + C       
Sbjct: 245 NLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLW 127
             +I+A     + DKA ++F  M    GC+  +         LCR  + E+A      + 
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIA-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + G+ P V +Y  +ING  K G ++ A  +   M +R  + NV  +N L++G  + G   
Sbjct: 364 KDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           +A  + +R+ ++  + P++V+YNV+I+GLC+ G  +   ++   M   + E D  T+ + 
Sbjct: 424 KAVHLLKRM-LDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV------ 301
           I+  CK G  + A      M+  GI +D VT   +IDG C  GK ++   + E       
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542

Query: 302 ------------MGRKGC------------------LNVVSYNILIRGLLENGKVDEAIS 331
                       M  KGC                   +VV+Y  L+ GL+ +G +  +  
Sbjct: 543 LTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFR 602

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
           + EL++   C  +   + ++INGLC+ G + +A ++L+ +++ G                
Sbjct: 603 MLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK---------LENAIFLFKEMS 425
             G+L  A   V  M + G +LN    +SL+ GF+ + K         ++  I + +++ 
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLG 722

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G +  +  +  L+  LCK  R  E+   V+ +L+ G   +     +++   C  KK  
Sbjct: 723 --GSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEK-AIDIIMESYCSKKKHT 777

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
             ++L    L+ GF P    + ++I GL   G  E A +L   +   N V         +
Sbjct: 778 KCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYV 837

Query: 546 DGLFKTGDCDKALEIWNHILEERLRP 571
           + L +TGDC + +++ +  L  R RP
Sbjct: 838 ECLMETGDCSEVIDLVDQ-LHSRERP 862



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 181/396 (45%), Gaps = 51/396 (12%)

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + RM+ +        Y + ++ LCK G  E AE    ++++ G  +D+    +++ GFCR
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +++  +++++M R+G                                  C  +S ++
Sbjct: 243 GLNLRDALKVFDLMSREG---------------------------------TCAPNSVSY 269

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+GLC+                   GRL +A  L ++M + GC+ +  T   L+   
Sbjct: 270 SILIHGLCE------------------VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                ++ A  LF EM  +GC P V +Y  LI+GLC+  +  EA    ++M++ G  P +
Sbjct: 312 CDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSV 371

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ LING C+  ++  A +L     ++   P+V  +N L+ GLC  GK   A+ L   
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P++V+YN L+DGL + G  + A ++   +    L PD +++   +   C   +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGK 491

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              A  FL   L +GI    +T   L+  V N G +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 251/512 (49%), Gaps = 23/512 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG--VETNVV 171
           R  E     L+ + E G  P+V+SY  ++ GL  +     AL +F  M + G     NVV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN +I GFFK+G+  +A  ++  +  +  V P+VVTYN++I+ LCK    D+   +  +
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  N  + D+ TY   IHG    G ++ A +++R+M   G+  + V  N+ +   C+ G+
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            KE  E+++ M  KG   ++VSY  L+ G    G   + I ++  ++     AD     +
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+   K G ++ A+ I  E                  M + G   +  T +++++ F +
Sbjct: 446 LIHAYAKRGMVDDAMLIFTE------------------MQQQGVSPDVVTYSTVISAFSR 487

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KPDMI 469
             +L +A+  F +M  +G  P    Y+++I G C      +A   V EM+ KG  +PD++
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            ++ +IN LC+  ++  A  +       G  PDV  +  LI G C  GK++ A ++   M
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +      ++VTY+TL+DG FK G  +  L ++  +  + ++P+ ++Y I L GL    R 
Sbjct: 608 EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             A +  ++ +  G   T   + I++  +  N
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 274/573 (47%), Gaps = 30/573 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILC---------RKRQFEKAKRFLNSLWE 128
           +++    NSM  +ALD+FQ M +  G C   ++          ++ +  KA    + +  
Sbjct: 234 ILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTR 293

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+KPDV +Y  +I+ L K+  +  A  V  +M   G + + V YN +I G+   G    
Sbjct: 294 QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKE 353

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A +++ ++     + PN+V  N  +  LCK GR  E  E++D M     + D  +YC+ +
Sbjct: 354 AAKMFRKM-KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLL 412

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           HG    G       ++  M  +GI  D   +N +I  + + G + +   ++  M ++G  
Sbjct: 413 HGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVS 472

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +VV+Y+ +I      G++ +A+  +  +  +    ++  +  +I G C +G L KA ++
Sbjct: 473 PDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKEL 532

Query: 368 LNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           ++E+   G                  +GR+ DA  + + +   G + +  T  SL++G+ 
Sbjct: 533 VSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYC 592

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              K++ A  +   M   G    +V+Y+TL++G  K  R  +  +  +EM  KG KP+ +
Sbjct: 593 LVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV 652

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY +++ GL ++ +   A K   + ++ G T  V++Y I++ GLC     ++A+ L+  +
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
              N   ++   NT+++ ++K    ++A E++  I    L P+  +Y + +  L     +
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAV 772

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA    +     GI+P +   + ++R ++  G
Sbjct: 773 EDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 277/616 (44%), Gaps = 32/616 (5%)

Query: 38  PHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKAL 93
           P++F +  IL+ L D  +      + +++  +   C  +V    +VI  + K     KA 
Sbjct: 226 PNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKAC 285

Query: 94  DVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            +F  M           +      LC+ R  +KA+  L  +   G +PD  +Y  +I+G 
Sbjct: 286 SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGY 345

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
              G L  A  +F +M  RG+  N+V  N  +    K G    A EI++ +  +    P+
Sbjct: 346 ATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-KPD 404

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           +V+Y  +++G    G F + + +++ MK N    D   +   IH   K G V+ A  ++ 
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL-LEN 323
           EM + G+  D VTY+ +I  F R G++ +  E +  M  +G   N   Y+ +I+G  +  
Sbjct: 465 EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------- 376
           G V     + E++ +     D      +IN LCK+G +  A  I + V + GE       
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584

Query: 377 GRLADAASLVNRMDKH----------GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
             L D   LV +MDK           G + +  T ++L++G+ +  ++ + + LF+EM R
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQR 644

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P  V+Y  ++ GL +  R   A     EM+E G    +  Y +++ GLC++   D 
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+ L  +         +T+ N +I+ +    + E+A +L++ +     +PN  TY  ++ 
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L K G  + A  +++ + +  + P     N  ++ L     ++ A  +L+    + IL 
Sbjct: 765 NLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILL 824

Query: 607 TTITWHILVRAVMNNG 622
              T  +++      G
Sbjct: 825 EASTTSLMLSLFSRKG 840



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 206/423 (48%), Gaps = 23/423 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
            V TY+++++  C+  R D  L ++  + +   +    T  + +  LC A   E A  V 
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 265 -REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRGL 320
              M E G   +  +Y+ ++ G C     +   +L+++M ++G     NVV+YN +I G 
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G+  +A S++  +  +    D  T+ ++I+ LCK   ++KA  +L +          
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ---------- 325

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                   M  +G + +  T N +++G+    +L+ A  +F++M  +G  P +V  N+ +
Sbjct: 326 --------MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
             LCK  R  EA      M  KG KPD+++Y  L++G          + L       G  
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D  ++NILIH     G V+DA+ +++ M+++   P++VTY+T++    + G    A+E 
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI-LPTTITWHILVRAVM 619
           +N ++   ++P+   Y+  ++G C    +  A E +++ + +GI  P  + ++ ++ ++ 
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557

Query: 620 NNG 622
            +G
Sbjct: 558 KDG 560



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 197/448 (43%), Gaps = 46/448 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +I AY K  M D A+ +F  M +                           +G+ PDV +Y
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQ---------------------------QGVSPDVVTY 478

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVI+   + G L  A+  F++M  RG++ N   Y+ +I GF   G  ++AKE+   ++ 
Sbjct: 479 STVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN 538

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +    P++V +N +IN LCK GR  +  +++D +       D  T+ S I G C  G ++
Sbjct: 539 KGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMD 598

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A ++   M   G+  D VTY+ ++DG+ + G+I +   L+  M RKG   N V+Y I++
Sbjct: 599 KAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL   G+   A   +  + E       + +G+++ GLC+N   ++AI            
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI------------ 706

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                  L  ++     K +    N+++N   +  + E A  LF  +S  G  P   +Y 
Sbjct: 707 ------ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I  L K     +A +    M + G  P     + +I  L +  +I  A     +   K
Sbjct: 761 VMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL 525
               + +  ++++      GK  + ++L
Sbjct: 821 RILLEASTTSLMLSLFSRKGKYHEDMKL 848



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 178/388 (45%), Gaps = 35/388 (9%)

Query: 253 KAGNV--EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG------- 303
           +AG +  + A  ++ E+      V   + N  +    RA     C      +        
Sbjct: 84  RAGTLSRDDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRV 143

Query: 304 -------RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
                  R   L V +Y+IL+       + D  + ++  +          T   L+  LC
Sbjct: 144 CREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLC 203

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
              Y N+  + +N               L++RM + GC  N ++ + ++ G    S  + 
Sbjct: 204 ---YANRTEEAVN--------------VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246

Query: 417 AIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           A+ LF+ M+++G  CSP VV+YNT+I+G  K    G+A S   EM  +G KPD++TY+L+
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+ LC+++ +D A  +  Q    G  PD   YN +IHG  + G++++A +++  MK R  
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL 366

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           +PN+V  N+ +  L K G   +A EI++ +  +  +PDI+SY   L G  S    +D   
Sbjct: 367 IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
             N     GI      ++IL+ A    G
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRG 454



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 201/452 (44%), Gaps = 68/452 (15%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA------------ERVYREMVES 270
           D+   M+D + +        +   F+  L +A +                 RV RE    
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150

Query: 271 GIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            +    V TY+ ++D  CRA +      L+  + R G  ++ ++ + L++ L    + +E
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210

Query: 329 AISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV-EEGGEGRLADAASLV 386
           A+++    + E  C  +  ++ +++ GLC N    +A+ +   + +EGG           
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGG----------- 259

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
                  C  N    N++++GF +  +   A  LF EM+R+G  P VV+YN +I+ LCK 
Sbjct: 260 ------ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
               +A   +++M   G +PD +TY+ +I+G     ++  A K+  +   +G  P++ + 
Sbjct: 314 RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVIC 373

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL------------MDGLF----- 549
           N  +  LC  G+ ++A +++ +M  +   P++V+Y TL            M GLF     
Sbjct: 374 NSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433

Query: 550 ------------------KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                             K G  D A+ I+  + ++ + PD+++Y+  +       R++D
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD 493

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           A E  N  + RGI P T  +H +++    +G 
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 164/353 (46%), Gaps = 26/353 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRIL------------ELIE--IQKCYCPEDVAL--SVIQAYG 84
           F+ ++ R I P   V+ S I             EL+   I K     D+    SVI +  
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557

Query: 85  KNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           K+     A D+F  + +I        F       C   + +KA + L+++   G++ D+ 
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y T+++G  K+G +   L +F EM  +GV+ N V Y I++ G F+ G  + A++ +  +
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + E+     V  Y +++ GLC+    DE + ++ ++     +       + I+ + K   
Sbjct: 678 I-ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSY-NI 315
            E A+ ++  +  SG+  +  TY  MI    + G +++   ++  M + G +      N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +IR LLE G++ +A +    +  K    +++T  ++++   + G  ++ +++L
Sbjct: 797 IIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 167/617 (27%), Positives = 284/617 (46%), Gaps = 71/617 (11%)

Query: 1   MVISAKRLLNLLKAEKNPHT-ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-S 58
           M  S + L+ + K  K P T AL LF++AT + G  H+ H    IL  L+   ++    S
Sbjct: 1   MSQSHEALILIQKMVKVPPTKALLLFNTATYQ-GLQHTSHSISFILNHLLSSGMLPQAQS 59

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
            IL LI  +    P  + L + QA+         L                         
Sbjct: 60  LILRLISGR---IPSSLMLQLTQAHFTPCSTYTPL------------------------- 91

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
                              Y TV+N  V S     AL     M   G       +N L+ 
Sbjct: 92  -------------------YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLC 132

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              +   + +A  I+  L  ++ V  +  ++ +MI G C+ G F +   +   +++    
Sbjct: 133 LLIRSNYFDKAWWIFNEL--KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +   Y + I G CK GNV  A+ ++ +M   G+  +  TY+ +++GF + G  +E F++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +E M R G + N  +YN LI     +G VD+A  ++  +REK       T+ +LI GLC+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               +  +A  LV++++K G   N  T N L+NGF    K+++A
Sbjct: 311 GK------------------KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSA 352

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF ++   G SPT+V+YNTLI G  KVE    A   VKEM E+   P  +TY++LI+ 
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
             +    + A ++     + G  PDV  Y++L+HGLC  G +++A +L+ ++ + +  PN
Sbjct: 413 FARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            V YNT++ G  K G   +AL + N +++  + P++ S+  T+  LC   +  +A   L 
Sbjct: 473 SVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLG 532

Query: 598 DALCRGILPTTITWHIL 614
             +  G+ P+   + ++
Sbjct: 533 QMINSGLKPSVSLYKMV 549



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 231/508 (45%), Gaps = 40/508 (7%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           KA    N+   +GL+   +S   ++N L+ SG L  A ++   +    + ++++      
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLML----- 75

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
                        ++ +      S Y  +  Y+ ++N        D+ L     M     
Sbjct: 76  -------------QLTQAHFTPCSTYTPL--YDTVVNAYVHSHSTDQALTFLHHMIHEGH 120

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
              S T+ + +  L ++   + A  ++ E+ +S + +DA ++  MI G C AG   + F 
Sbjct: 121 VPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFR 179

Query: 298 LWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L  ++   G   NVV Y  LI G  ++G V  A +++  +       +  T+ VL+NG  
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFF 239

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G   +  Q                  +   M + G   NAY  N L++ +     ++ 
Sbjct: 240 KQGLQREGFQ------------------MYENMKRSGIVPNAYAYNCLISEYCNDGMVDK 281

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +F EM  KG +  V++YN LI GLC+ ++FGEA   V ++ + G  P+++TY++LIN
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C  +K+D A++L  Q    G +P +  YN LI G      +  AL L   M++R   P
Sbjct: 342 GFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAP 401

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + VTY  L+D   +    +KA E+ + + +  L PD+ +Y++ L GLC    M +A +  
Sbjct: 402 SKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLF 461

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
                  + P ++ ++ ++      G+S
Sbjct: 462 KSLGEMHLQPNSVIYNTMIHGYCKEGSS 489


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 239/497 (48%), Gaps = 25/497 (5%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            + +   G+ PDV     V+  L  +       AV  EM + G+E ++V YN L+D F K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 183 KGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           +G   +   + + +    S   PN VT+NV+I GL + G  +E  EM + M+ +++   S
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK-ASS 308

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC---FEL 298
           FTY   I GL   G V+ A+ +  EM   GI    VTYNAMI G  ++G+++     F  
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 299 WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
              MG +   +V++YN L+ G  + G + EA+ ++  LR         T+ +LI+G C+ 
Sbjct: 369 MRAMGLQP--DVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G L +A ++  E+ E                   GC  +  T   LM G   A  L  A 
Sbjct: 427 GDLEEARRLKEEMVE------------------QGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
             F EM  KG  P   +YNT I     +    +A+   + M+ +G   D +TY++LI+GL
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++  ++ A  L  + +  G  PD   Y  LIH  C  G + +A + + +M      P+ 
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY   +    + G+   A   +  +LEE + P+ I+YN+ +  LC   R   A+   ++
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 599 ALCRGILPTTITWHILV 615
            L RG++P   T+ +L+
Sbjct: 649 MLERGLVPNKYTYTLLI 665



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 21/380 (5%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--CL-NVVSYNILIRG 319
           V+ EM++ GI    VTYN ++D F + G+  +   L + M  +G  CL N V++N++I G
Sbjct: 224 VHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITG 283

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L   G ++EA  + E +R     A S T+  LI GL   G++ KA  +  E+E  G    
Sbjct: 284 LARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPT 342

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G++  A      M   G + +  T NSL+NG+ +A  L+ A+ LF 
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           ++   G +PTV++YN LI+G C++    EA    +EM+E+G  PD+ TY++L+ G   + 
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            + MA +   + L KG  PD   YN  I    + G +  A +L   M       + VTYN
Sbjct: 463 SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYN 522

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+DGL KTG+ + A ++   ++   L+PD I+Y   +   C    + +A +F  D +  
Sbjct: 523 ILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+ P+ +T+ + + A    G
Sbjct: 583 GLAPSAVTYTVFIHAYCRRG 602



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 194/413 (46%), Gaps = 21/413 (5%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           +KA      +  +G+ P V +Y  +I+GL++SG +  A   F EM   G++ +V+ YN L
Sbjct: 325 KKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSL 384

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           ++G+ K G    A  ++  L     + P V+TYN++I+G C+ G  +E   + + M +  
Sbjct: 385 LNGYCKAGSLKEALLLFGDL-RHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D  TY   + G   A ++  A   + EM+  G+  D   YN  I      G I + F
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503

Query: 297 ELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            L EVM  +G   + V+YNILI GL + G +++A  +   +       D  T+  LI+  
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C+ G L +A +   +                  M   G   +A T    ++ + +   L 
Sbjct: 564 CERGLLREARKFFKD------------------MISDGLAPSAVTYTVFIHAYCRRGNLY 605

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           +A   F++M  +G  P  ++YN LI+ LC+  R   AY    EMLE+G  P+  TY+LLI
Sbjct: 606 SAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLI 665

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +G C+    + A++   +  Q G  PD   +  L  G    G +  A++   N
Sbjct: 666 DGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLEN 717



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 167/370 (45%), Gaps = 20/370 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  Q E A+     +   GL+PDV +Y +++NG  K+G L  AL +F ++   G+   
Sbjct: 353 LLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPT 412

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YNILIDG+ + GD   A+ + E +V E    P+V TY +++ G           E +
Sbjct: 413 VLTYNILIDGYCRLGDLEEARRLKEEMV-EQGCLPDVCTYTILMKGSHNACSLAMAREFF 471

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     + D F Y + I      G +  A R+   M+  GI  D VTYN +IDG C+ 
Sbjct: 472 DEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKT 531

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +  +L   M   G   + ++Y  LI    E G + EA   ++ +        + T+
Sbjct: 532 GNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTY 591

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            V I+  C+                   G L  A     +M + G + N  T N L++  
Sbjct: 592 TVFIHAYCR------------------RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  + + A   F EM  +G  P   +Y  LI+G CK   + +A  F  EM + G  PD 
Sbjct: 634 CRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDY 693

Query: 469 ITYSLLINGL 478
           +T+  L  G 
Sbjct: 694 LTHKALFKGF 703



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 22/332 (6%)

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
           C   +  M   G   +V   N ++R L +  + D+  ++   + +        T+  L++
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
              K G  +K   +L E+E  G G                C  N  T N ++ G  +   
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSG----------------CLPNDVTHNVVITGLARKGD 289

Query: 414 LENAIFLFKEM--SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           LE A  + + M  S+K  S    +YN LI GL       +A     EM  +G  P ++TY
Sbjct: 290 LEEAAEMVEGMRLSKKASS---FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTY 346

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+GL QS +++ A     +    G  PDV  YN L++G C AG +++AL L+ +++ 
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P ++TYN L+DG  + GD ++A  +   ++E+   PD+ +Y I +KG  +   ++ 
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           A EF ++ L +G+ P    ++  +RA +  GA
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGA 498


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 204/370 (55%), Gaps = 29/370 (7%)

Query: 184 GDYMRAKEIWE------RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           G + RA + W         V +    P  VTYN +I+GLCK  R  E  ++ + M  +  
Sbjct: 26  GSHRRALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGC 85

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             D FTY + I G CK+   + A RV+ ++V  G   D VTY+ +IDG C+ G++KE  +
Sbjct: 86  IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 145

Query: 298 LWEVMGRKG-CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           L+  M + G C+ N V+YN LI G    GK+DEA+++ E + E   + D  T+  L+NG 
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK                    RL DA  L+N+M + G   N  T  SLM+G  + ++L 
Sbjct: 206 CK------------------LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLS 247

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           +A+ +  EM RK CSPTV +YNT+++G C+V +  EA  F+ E  E    P++++++++I
Sbjct: 248 DAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMI 305

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM-KKRNC 534
            GLC+  +   A++L  +  ++   PDV MY  +I  LC   KV++A ++Y  M ++  C
Sbjct: 306 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGC 365

Query: 535 VPNLVTYNTL 544
           +PN +TY+T 
Sbjct: 366 LPNSITYSTF 375



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 186/342 (54%), Gaps = 23/342 (6%)

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
           AVTYN++I G C+A +  E ++L E M   GC+ ++ +Y  LI G  ++ K D+A+ ++E
Sbjct: 54  AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 113

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG- 393
            L  +    D  T+  LI+GLCK                  EGRL +A  L  RM K G 
Sbjct: 114 QLVARGFRPDVVTYSCLIDGLCK------------------EGRLKEAIDLFGRMIKSGS 155

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T NSL++GF +  K++ A+ L + M+  G SP VV+Y TL+NG CK+ R  +AY
Sbjct: 156 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 215

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             + +M  KG  P+++T++ L++GLC+  ++  A+ +  +  +K  +P V  YN ++ G 
Sbjct: 216 DLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 275

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C   ++E+A +    +++ +C PN+V++N ++ GL K     +A+E+       R  PD+
Sbjct: 276 CRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 333

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHIL 614
           + Y   +  LC   ++ +A       L   G LP +IT+   
Sbjct: 334 VMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 177/338 (52%), Gaps = 35/338 (10%)

Query: 290 GKIKECFELWEVMGRKGC----------LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           G  +   + W   GR+GC             V+YN LI GL +  +  EA  + E +   
Sbjct: 26  GSHRRALQRWP--GRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 83

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
            C  D  T+  LI G CK+   + A+++  +              LV R    G + +  
Sbjct: 84  GCIPDIFTYTTLITGFCKSKKSDDALRVFEQ--------------LVAR----GFRPDVV 125

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           T + L++G  +  +L+ AI LF  M + G C P  V+YN+LI+G C++ +  EA + ++ 
Sbjct: 126 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 185

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M E G  PD++TY+ L+NG C+  ++D A  L  Q  +KG TP+V  +  L+ GLC   +
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYN 577
           + DA+ +   M++++C P + TYNT++DG  +    ++A +    +LEE    P+++S+N
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF---MLEEMDCPPNVVSFN 302

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I ++GLC  +R S+A E + +A  R   P  + +  ++
Sbjct: 303 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 340



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 185/380 (48%), Gaps = 59/380 (15%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P   +Y ++I+GL K+     A  + +EM   G   ++  Y  LI GF K      A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM-KKNEREKDSFTYCSFIHGL 251
           +E+LV      P+VVTY+ +I+GLCK GR  E ++++ RM K      ++ TY S I G 
Sbjct: 112 FEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           C+ G ++ A  +   M E+G   D VTY  +++GFC+  ++ + ++L   M RKG   NV
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V++  L+ GL    ++ +A+ I   +R K+C+    T+  +++G C+          +N+
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR----------VNQ 280

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           +EE  +                                          F+ +EM    C 
Sbjct: 281 LEEARK------------------------------------------FMLEEMD---CP 295

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P VVS+N +I GLCKV R  EA   V+E   +   PD++ Y+ +I+ LC+ KK+D A ++
Sbjct: 296 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRV 355

Query: 491 CCQFLQK-GFTPDVTMYNIL 509
             + L++ G  P+   Y+  
Sbjct: 356 YRKMLEEPGCLPNSITYSTF 375



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 168/332 (50%), Gaps = 22/332 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +A   L  +   G  PD+++Y T+I G  KS     AL VF+++  RG   +
Sbjct: 64  LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 123

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ LIDG  K+G    A +++ R++   S  PN VTYN +I+G C+ G+ DE + + 
Sbjct: 124 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 183

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +RM +     D  TY + ++G CK   ++ A  +  +M   G+  + VT+ +++DG CR 
Sbjct: 184 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRE 243

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ +   +   M RK C   V +YN ++ G     +++EA     +L E +C  +  + 
Sbjct: 244 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF--MLEEMDCPPNVVSF 301

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I GLCK   +N++ + +  VEE    R               C  +     ++++  
Sbjct: 302 NIMIRGLCK---VNRSSEAMELVEEARRRR---------------CNPDVVMYTTVIDVL 343

Query: 409 IQASKLENAIFLFKEM-SRKGCSPTVVSYNTL 439
            +  K++ A  ++++M    GC P  ++Y+T 
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           VP  VTYN+L+ GL K     +A ++   ++     PDI +Y   + G C   +  DA  
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
                + RG  P  +T+  L+  +   G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEG 138


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 162/606 (26%), Positives = 285/606 (47%), Gaps = 64/606 (10%)

Query: 18  PHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-SRILELIEIQKCYCPEDVA 76
           P  AL+LF S+  + G  H+      IL  LI   L  H  S +L+LI  Q        +
Sbjct: 6   PLKALSLFTSSALQ-GXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQ----ISSSS 60

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
            +    + + + P   LD F     I         R +  E+A  + N +  +GL P   
Sbjct: 61  FTPSSLFHELTQPH--LDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSN 118

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           ++  ++  L+KS     A  VF+E                      KG+           
Sbjct: 119 TFNNLLILLIKSNFFEKAWRVFNE---------------------TKGN----------- 146

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                V  +V ++ +MI G C+ G  D+  E+  +M++     +   Y + I G CK G+
Sbjct: 147 -----VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 201

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           +E  ++++ +M E  +  +  TY  +I+GF + G  K+  EL+E M   G + NV +YN 
Sbjct: 202 IERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNS 261

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I     +GK++ A  +++ +RE+    +  T+  LI GLC+                  
Sbjct: 262 MICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ------------------ 303

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           E R+ +A  L+ RM + G   N  + N+L++G+     L+ A  LF +M   G SP++ +
Sbjct: 304 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 363

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN LI G  + +        V+EM  +G  P  +TY++L++ L +S  I+ A ++     
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 423

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G   D+ +Y +LIHGLC  G +++A +L+ ++ + +  PN V YNT++ G  K G   
Sbjct: 424 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 483

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +AL +   + E  + P++ SYN T+  LC   + ++A   L D +  G+ P+   W+++ 
Sbjct: 484 RALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMIS 543

Query: 616 RAVMNN 621
           +A  +N
Sbjct: 544 KARFDN 549



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 193/421 (45%), Gaps = 20/421 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V+ +  +IN   +    ++ L   ++M        S T+ + +  L K+   E A RV+
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLEN 323
            E  +  + +D  ++  MI G C  G + + FE+   M   G   NVV Y  LI G  +N
Sbjct: 141 NE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G ++    ++  + E +  A+  T+ VLING  K G L K                 D  
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMG-LKK-----------------DGI 241

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  +M   G   N YT NS++       KL NA  LF EM  +G +  VV+YNTLI GL
Sbjct: 242 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 301

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+  R  EA   +  M   G  P++I+Y+ LI+G C    +D A  L  Q    G +P +
Sbjct: 302 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 361

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNILI G   A        +   M+ R   P+ VTY  LMD L ++ + +KA +I++ 
Sbjct: 362 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 421

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           + +  L  DI  Y + + GLC    M +A +         + P  + ++ ++      G+
Sbjct: 422 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 481

Query: 624 S 624
           S
Sbjct: 482 S 482



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           F   V ++  +I+    +   E AL   + M  R  VP   T+N L+  L K+   +KA 
Sbjct: 78  FPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 137

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++N   +  ++ D+ S+ I +KG C    +   FE L      G+ P  + +  L+   
Sbjct: 138 RVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 196

Query: 619 MNNG 622
             NG
Sbjct: 197 CKNG 200


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 167/611 (27%), Positives = 279/611 (45%), Gaps = 71/611 (11%)

Query: 1   MVISAKRLLNLLKAEKNPHT-ALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV-S 58
           M  S + L+ + K  K P T AL LF++AT + G  H+ H    IL  L+   ++    S
Sbjct: 1   MSQSHEALILIQKMVKVPPTKALLLFNTATYQ-GLQHTSHSISFILNHLLSSGMLPQAQS 59

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEK 118
            IL LI  +    P  + L + QA+    +    L                         
Sbjct: 60  LILRLISGR---IPSSLMLQLTQAHFTPCLTYTPL------------------------- 91

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
                              Y T++N  V S     AL     M   G       +N L+ 
Sbjct: 92  -------------------YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMC 132

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              +   + +A  I+  L  ++ V  +  ++ +MI G C+ G F +   +   +++    
Sbjct: 133 LLIRSNYFDKAWWIFNEL--KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +   Y + I G CK GNV  A+ ++ +M   G+  +  TY+ +++GF + G  +E F++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +E M R G + N  +YN LI      G VD+A  ++  +REK       T+ +LI GLC+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               +  +A  LV++++K G   N  T N L+NGF    K++ A
Sbjct: 311 GK------------------KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTA 352

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF ++   G SPT+V+YNTLI G  KVE    A   VKEM E+   P  +TY++LI+ 
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
             +    + A ++     + G  PDV  Y++LIHGLC  G +++A +L+ ++ + +  PN
Sbjct: 413 FARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            V YNT++ G  K G   +AL + N ++   + P++ S+  T+  LC   +  +A   L 
Sbjct: 473 SVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLG 532

Query: 598 DALCRGILPTT 608
             +  G+ P+ 
Sbjct: 533 QMINSGLKPSV 543



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/526 (23%), Positives = 239/526 (45%), Gaps = 40/526 (7%)

Query: 106 EAGILCRKR---QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           EA IL +K       KA    N+   +GL+   +S   ++N L+ SG L  A ++   + 
Sbjct: 6   EALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLI 65

Query: 163 ERGVETNVVC----------------YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
              + ++++                 Y+ +++ +       +A      ++ E  V P  
Sbjct: 66  SGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHV-PLS 124

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            T+N ++  L +   FD+   +++ +K ++   D++++   I G C+AG      R+   
Sbjct: 125 NTFNNLMCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAM 183

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
           + E G+  + V Y  +IDG C+ G +     L+  M R G + N  +Y++L+ G  + G 
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGL 243

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
             E   ++E ++      ++  +  LI+  C  G ++KA ++  E+ E G          
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIA-------- 295

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
                   C +  Y  N L+ G  +  K   A+ L  ++++ G SP +V+YN LING C 
Sbjct: 296 --------CGVMTY--NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A     ++   G  P ++TY+ LI G  + + +  AL L  +  ++   P    
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y ILI         E A +++S M+K   VP++ TY+ L+ GL   G+  +A +++  + 
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           E  L+P+ + YN  + G C       A   LN+ +  G++P   ++
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 252/490 (51%), Gaps = 20/490 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +     A   +N + E GL P+  +Y  +I+G  K+G++  A   + EM  +G+ ++V
Sbjct: 156 CMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSV 215

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
              N +++G+ K   +  A  ++   +   S   NV T+N +++ LCK G+ +E   +WD
Sbjct: 216 YSLNSILEGYLKCQSWQNAFTMFNDAL--ESGLANVFTFNTLLSWLCKEGKMNEACNLWD 273

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +       +  +Y + I G C+  N+  A +VY+EM+++G   +AVT+  ++DG+ + G
Sbjct: 274 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333

Query: 291 KIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            I+  F ++  M     L    +  I+I+GL + G+  E   ++     +        + 
Sbjct: 334 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 393

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAA-SLVNRMDKH 392
            +I+G  K G +N A  +  E+ E G                +G   D A  L+N M + 
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K++     +L++GF +   +++A  L  E+   G SP    YN++I G   +    EA
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               K+M+ +G   D+ TY+ LI+GL +S ++  A  +  + L KG  PD   + +LI+G
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC+ G+ E+A ++  +M  +N +P+++ YNTL+ G FK G+  +A  + + +L+  L PD
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633

Query: 573 IISYNITLKG 582
            I+Y+I + G
Sbjct: 634 NITYDILVNG 643



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 259/540 (47%), Gaps = 20/540 (3%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           E +     +LC K     A   L  +   G  P   ++ +VI   VK G++  AL + D+
Sbjct: 76  EAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDD 135

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G   N+     L+ G+  +G+ +R+  +    + E+ + PN VTY+V+I+G CK G
Sbjct: 136 MVNCGKSMNLAVATSLMKGYCMQGN-LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 194

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             ++  E +  MK        ++  S + G  K  + + A  ++ + +ESG+  +  T+N
Sbjct: 195 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFN 253

Query: 281 AMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++   C+ GK+ E   LW EV+ +    NVVSYN +I G      ++ A  +++ + + 
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADA 382
               ++ T  +L++G  K G +  A  I + +++                    GR  + 
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 373

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L N+    G        N++++GFI+   +  A  +++EM   G +P+ V+Y +LI+G
Sbjct: 374 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            CK      A   + +M  KG K D+  Y  LI+G C+ + +  A +L  +    G +P+
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
             +YN +I G  +   VE+A+ LY  M       +L TY +L+DGL K+G    A +I  
Sbjct: 494 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +L + + PD  ++ + + GLC+  +  +A + L D   + ++P+ + ++ L+      G
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 21/461 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    EKA  F + +  KG++  VYS  +++ G +K      A  +F++  E G+  NV
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANV 249

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N L+    K+G    A  +W+  V+   + PNVV+YN +I G C+    +   +++ 
Sbjct: 250 FTFNTLLSWLCKEGKMNEACNLWDE-VIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M  N    ++ T+   + G  K G++E A  ++  M ++ I     T   +I G C+AG
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368

Query: 291 KIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  E  +L+     +G +   + YN +I G ++ G ++ A +++  + E      + T+ 
Sbjct: 369 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 428

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            LI+G CK   ++ A+++LN+++  G        G L D          A  L+N +   
Sbjct: 429 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 488

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   N +  NS++ GF   + +E AI L+K+M  +G    + +Y +LI+GL K  R   A
Sbjct: 489 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 548

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                EML KG  PD   +++LINGLC   + + A K+      K   P V +YN LI G
Sbjct: 549 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
               G +++A +L+  M  R  VP+ +TY+ L++G FK GD
Sbjct: 609 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK-GD 648



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 248/565 (43%), Gaps = 53/565 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + RK    +A+   N +   G+  D ++   ++   +K G++L A   F +   RGVE +
Sbjct: 15  MVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELD 74

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+I +     K +   A  +   +     + P   T+  +I    K G   E L + 
Sbjct: 75  QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE-GTFTSVITACVKEGNVAEALRLK 133

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M    +  +     S + G C  GN+  A  +  E+ ESG+  + VTY+ +IDG C+ 
Sbjct: 134 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 193

Query: 290 GKIKECFELWEVMGRKGC-----------------------------------LNVVSYN 314
           G I++ FE +  M  KG                                     NV ++N
Sbjct: 194 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFN 253

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            L+  L + GK++EA ++W+ +  K  + +  ++  +I G C+   +N A ++  E+ + 
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 +G + +A S+ +RM          T   ++ G  +A +    
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 373

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LF +   +G  PT + YNT+I+G  K      A +  +EM E G  P  +TY+ LI+G
Sbjct: 374 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+   ID+ALKL     +KG   D+  Y  LI G C    ++ A +L + ++     PN
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
              YN+++ G     + ++A++++  ++ E +  D+ +Y   + GL    R+  A +   
Sbjct: 494 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           + L +GILP      +L+  + N G
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKG 578



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 214/454 (47%), Gaps = 20/454 (4%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++ C NIL+    +K     A+E+  ++++   V  +  T +VM+    K G   E  + 
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLL-VGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + + K    E D   Y  F+H LC   N   A  + REM  +G      T+ ++I    +
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 289 AGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G + E   L + M   G  +N+     L++G    G +  A+ +   + E     +  T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG------------EGRL-----ADAASLVNRMD 390
           + VLI+G CKNG + KA +  +E++  G            EG L      +A ++ N   
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G   N +T N+L++   +  K+  A  L+ E+  KG SP VVSYN +I G C+ +   
Sbjct: 243 ESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A    KEML+ G+ P+ +T+++L++G  +   I+ A  +  +       P  T   I+I
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            GLC AG+  +   L++    +  VP  + YNT++DG  K G+ + A  ++  + E  + 
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           P  ++Y   + G C  + +  A + LND   +G+
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGL 455



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K QFE A++ L  +  K + P V  Y T+I G  K G+L  A  + DEM +RG+  +
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633

Query: 170 VVCYNILIDGFFK-KGDYMR 188
            + Y+IL++G FK  G++ R
Sbjct: 634 NITYDILVNGKFKGDGNFSR 653



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 80/193 (41%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P++   N L+  + +     EA     +ML  G   D  T  +++    +   I  A +
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              Q   +G   D   Y+I +H LC       AL L   M+    +P   T+ +++    
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G+  +AL + + ++      ++      +KG C    +  A   +N+    G++P  +
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 610 TWHILVRAVMNNG 622
           T+ +L+     NG
Sbjct: 182 TYSVLIDGCCKNG 194


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/601 (25%), Positives = 274/601 (45%), Gaps = 86/601 (14%)

Query: 57  VSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQF 116
           V   L+ + ++   C ED  ++ I A+ +    D+AL  F R +++ GC           
Sbjct: 17  VQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDL-GCR---------- 65

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
                           P V  Y  +++ L++   +   + V+D M + GV+ NV  YN+L
Sbjct: 66  ---------------DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLL 110

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I    +      A+++ + +      +P+ V++  +++G+CK GR +E      R    E
Sbjct: 111 IRALCQNDRVDAARKMLDEMS-RKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAE 164

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
                 +Y + +H LC    +     V  EMV+ G+  + VTY  ++D FC+A +++   
Sbjct: 165 TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMAC 224

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
            +   M   GC  NV+++  L++G  E+GKV +A+S+W  + ++     + ++ VLI GL
Sbjct: 225 AILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 284

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C  G L  A+   N                   M ++    NA T ++L++GF  A  L+
Sbjct: 285 CCIGDLKGALDFFNS------------------MKRNALLPNATTYSTLVDGFSNAGDLD 326

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ ++ EM   GC P VV Y  +I+ LCK   F +A S + +ML     P+ +T++ LI
Sbjct: 327 GAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI 386

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
             LC   ++  AL +     + G  P+   YN L+HGL   G  +DA  +   M      
Sbjct: 387 GRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFE 446

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD----------------------- 572
            +LVTYNT+++ L +      A+ +   ++ + ++PD                       
Sbjct: 447 LSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACL 506

Query: 573 ------------IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                       +++Y I +  LC+  ++S+A  +L   L  GI P   TW++LVRA+  
Sbjct: 507 LGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFT 566

Query: 621 N 621
           N
Sbjct: 567 N 567



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 192/389 (49%), Gaps = 14/389 (3%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           I    +AG+ + A + +    + G     V  YN ++D   R   +     +++ M + G
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NV +YN+LIR L +N +VD A  + + +  K C+ D  +HG +++G+CK G + +A 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 366 QILNE---VEEG---------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
             L E   V+           GE R+ +  S+VN M + G + N  T  ++++ F +A +
Sbjct: 160 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 219

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L  A  +   M   GC+P V+++  L+ G  +  +  +A S    M+++GW P  I+Y++
Sbjct: 220 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 279

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI GLC    +  AL       +    P+ T Y+ L+ G  +AG ++ A+ +++ MK   
Sbjct: 280 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 339

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN+V Y  ++D L K    D+A  + + +L +   P+ +++N  +  LC C R+  A 
Sbjct: 340 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 399

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
              +     G  P   T++ L+  +   G
Sbjct: 400 NVFHGMRRNGCHPNDRTYNELLHGLFREG 428


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 224/442 (50%), Gaps = 30/442 (6%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  +N ++    +  D      I+  +    SV P+VVTY +++NGLCK GR  + L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 229 WDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES--GIFVDAVTYNAMID 284
            D M + + +   D  T  + + GLCK+G V+ A     + + S  G   + VTYN +ID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC-- 341
            FCR G I   +EL E M  +G   N+V+ N ++ GL   G+   A+   E  REK    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL---EFFREKRTVW 311

Query: 342 ---NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLAD 381
                ++ T+  L+  L     +  A+++ +E    G                  GRL D
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A S+ + M + G KL+    N L+ GF +  +L  A  L +EM   G  P V +YNTL++
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK   F      + +M++ G +P +IT+  L++G C+  KID AL++     + G  P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI  LC  G V+ A++L+  MK+++   N+ T+N L+ GL      +KA E+ 
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELM 551

Query: 562 NHILEERLRPDIISYNITLKGL 583
           + + EER  PD ++ ++ ++ L
Sbjct: 552 DQMREERCFPDYVTVDVLMEWL 573



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 239/497 (48%), Gaps = 32/497 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKP-DVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGV 166
           +L R    E A RFL +    G    DV+++ +++  L +  D+ G   ++  M     V
Sbjct: 109 LLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMARIYALMQGCASV 168

Query: 167 ETNVVCYNILIDGFFKKG---DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
             +VV Y IL++G  K G   D +R  +   R   +  + P+VVT N +++GLCK GR  
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSR--QDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 224 ECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           E L   ++   +      ++ TY   I   C+ GN+  A  +  +M   G+  + VT N 
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 282 MIDGFCRAGKIKECFELWE---VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           ++ G CRAG+     E +     +  +G  N V+Y+ L+  LL    V  A+ ++     
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLAD 381
           +  + D+  +  +I+GL + G L  A  + + ++E G                 + RL +
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L+  M + G + +  T N+L++G  +A        L  +M   GC P+V+++ TL++
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CKV +  EA   ++ M E G  P+ + Y+ LI+ LC+   +D+A++L  +  +K    
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA---L 558
           +VT +N L+ GL      E A +L   M++  C P+ VT + LM+ L   G+ D+    +
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586

Query: 559 EIWNHILEERLRPDIIS 575
           +   H   +R+  D  S
Sbjct: 587 QQGEHTASKRIVSDRTS 603



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 199/406 (49%), Gaps = 25/406 (6%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           D F + S +  L +  +V G  R+Y  M   + +  D VTY  +++G C+AG++ +   +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 299 WEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADSTTHGVLIN 353
            + M R+      +VV+ N ++ GL ++G+V EA++  E  +     C  ++ T+  LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 354 GLCKNGYLNKAIQILNEVE-EGGEGRLADAASLVN---RMDKHGCKL------------- 396
             C+ G ++ A +++ ++E EG    +    ++V    R  + G  L             
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 397 --NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             NA T ++L+   +  + +  A+ LF E   +G SP  + Y T+I+GL +  R  +A S
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M E G+K D   Y++LI G C+ K++  A +L  +  + G  PDV  YN L+ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            AG      +L   M    C P+++T+ TL+ G  K G  D+AL I   + E  + P+ +
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            YN  +  LC    +  A E  ++   + +     T++ L++ + +
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 2/273 (0%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G L        A    +    +G  PD   Y T+I+GL ++G L  A ++   M E G +
Sbjct: 326 GALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFK 385

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   YNILI GF +K     A E+ + +  E  + P+V TYN +++G CK G F    E
Sbjct: 386 LDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  +M  +  +    T+ + +HG CK G ++ A R+ R M ESGI  + V YN +ID  C
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G +    EL++ M  K    NV ++N L++GL +    ++A  + + +RE+ C  D  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYV 564

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           T  VL+  L   G  ++  + + + E     R+
Sbjct: 565 TVDVLMEWLPVIGETDRLKRFMQQGEHTASKRI 597



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 37/388 (9%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALD-VFQRMNEIFGCEAGIL---------CRKRQFEKAK 120
           P+ V L +V+    K+    +AL  V QRM+ + GC    +         CR      A 
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV----ETNVVCYNIL 176
             +  +  +G+  ++ +  T++ GL ++G    AL  F E  +R V    + N V Y+ L
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTL 324

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +       +   A E++   + E    P+ + Y  MI+GL + GR ++   M   MK+  
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGH-SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAG 383

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + D+  Y   I G C+   +  A  + +EM E GI  D  TYN ++ G C+AG      
Sbjct: 384 FKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD 443

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL   M   GC  +V+++  L+ G  + GK+DEA+ I   + E   + ++  +  LI+ L
Sbjct: 444 ELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFL 503

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G ++ AI++ +E++E                       N  T N+L+ G    +  E
Sbjct: 504 CKRGDVDLAIELFDEMKE------------------KSVPANVTTFNALLKGLRDKNMPE 545

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            A  L  +M  + C P  V+ + L+  L
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG      C+  + ++A R L S+ E G+ P+   Y T+I+ L K GD+  A+ +FDEM 
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMK 520

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+ V  NV  +N L+ G   K    +A E+ +++  E   +P+ VT +V++  L   G  
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGET 579

Query: 223 D 223
           D
Sbjct: 580 D 580


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 275/564 (48%), Gaps = 31/564 (5%)

Query: 90  DKALDVF-QRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLK--PDVYSY 138
           D+A+DV   RM+E+      I        LC   + ++A   +  + ++G +  PDV S+
Sbjct: 176 DEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSF 235

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVI+G  K G++  A  +F+EM ++GV  +V  YN ++D   K    M   E   R ++
Sbjct: 236 NTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCK-ARAMDKAEFVLRQMV 294

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  V P+ VTYN +I+G    G + E  +M+ +M       D+ T+ SF+  LCK G  +
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            AE +++ M   G   D V+Y+ ++ G+   G+  +   L+  M  KG + N    NILI
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
               + G +DEA+ ++  ++ +    +  T+  LI+  C+ G L  A++  +++   G  
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 376 ---------------EGRLADAASLVNRMDKHGC-KLNAYTCNSLMNGFIQASKLENAIF 419
                           G L  A   ++ M   G  + N    +S+++      ++ +A  
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F  +   G  PT+V++N+LI+G C V +  +A+  +  M+  G +PD++T + L++G C
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S KID  L L  + L K   P    YNI++ GL  AG+   A +++  M       ++ 
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           TY  L+ GL +    D+A+ +++ +     + DI   N  +  L    R  +A +     
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 600 LCRGILPTTITWHILVRAVMNNGA 623
              G++P   T+ +++R ++  G+
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGS 738



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 253/519 (48%), Gaps = 22/519 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETN 169
           CR R+ +    F+  L   GLK       T +  L  +     A+ V    M E     +
Sbjct: 135 CRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPD 194

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
            + YN +I           A ++ +R+  E     P+VV++N +I+G  K G   +   +
Sbjct: 195 AISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNL 254

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           ++ M +     D  TY S +  LCKA  ++ AE V R+MV+ G+  D VTYNA+I G+  
Sbjct: 255 FNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSC 314

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +G  KE  +++  M  KG + + V+++  +  L ++G+  +A  I++ +  K    D  +
Sbjct: 315 SGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVS 374

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + +L++G                     EGR AD  +L + M   G   N +  N L++ 
Sbjct: 375 YSILLHGYAT------------------EGRFADMNNLFHSMADKGIVSNCHCINILISA 416

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   ++ A+ +F EM  +G  P VV+Y+TLI+  C++ R  +A     +M+  G +P+
Sbjct: 417 HAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPN 476

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGF-TPDVTMYNILIHGLCSAGKVEDALQLY 526
              Y  LI+G C    +  A +   + + KG   P++  ++ +IH LC  G+V DA  ++
Sbjct: 477 TAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF 536

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + +      P +VT+N+L+DG    G  +KA  + + ++   + PD+++ N  + G C  
Sbjct: 537 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            ++ D      + L + + PTT+T++I++  ++  G ++
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTS 635



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 228/490 (46%), Gaps = 29/490 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y  +    ++  +F++M           F      LC+  + + A+     +  K
Sbjct: 307 AIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTK 366

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD+ SY  +++G    G       +F  M ++G+ +N  C NILI    K+G    A
Sbjct: 367 GHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEA 426

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++  +  +  V PNVVTY+ +I+  C+ GR  + +E + +M     E ++  Y S IH
Sbjct: 427 MLVFTEMQGQ-GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIH 485

Query: 250 GLCKAGNVEGAERVYREMVESGIF-VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           G C  G++  A+    EM+  G+   + V ++++I   C  G++ +  +++ ++   G  
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR 545

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             +V++N LI G    GK+++A  + + +       D  T+  L++G CK+G ++  + +
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
             E                  M     K    T N +++G ++A +   A  +F EM   
Sbjct: 606 FRE------------------MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDS 647

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G +  + +Y  L+ GLC+ +   EA +   ++     K D+   + +IN L + ++ + A
Sbjct: 648 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEA 707

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             L       G  P+V+ Y ++I  L   G VE+A  ++S+M+K  C P+    N ++  
Sbjct: 708 NDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 767

Query: 548 LFKTGDCDKA 557
           L + GD  KA
Sbjct: 768 LLQKGDIVKA 777



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 178/384 (46%), Gaps = 22/384 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEV 301
           TY   +   C+A   +        ++ +G+    +     +   C A +  E  + L   
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLCKN 358
           M    C+ + +SYN +I+ L  + +  EA+ + + + ++   C+ D  +   +I+G  K 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G ++KA  + NE                  M + G   +  T NS+++   +A  ++ A 
Sbjct: 246 GEVSKACNLFNE------------------MVQKGVVPDVGTYNSIVDALCKARAMDKAE 287

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           F+ ++M  KG  P  V+YN +I+G      + E+    ++M  KG  PD +T+S  ++ L
Sbjct: 288 FVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSL 347

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  +   A ++      KG  PD+  Y+IL+HG  + G+  D   L+ +M  +  V N 
Sbjct: 348 CKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC 407

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
              N L+    K G  D+A+ ++  +  + +RP++++Y+  +   C   R++DA E  + 
Sbjct: 408 HCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            +  GI P T  +H L+     +G
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHG 491



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 38/300 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            C      KAK F++ +  KGL +P++  + ++I+ L   G ++ A  VF+ +   G   
Sbjct: 487 FCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRP 546

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +V +N LIDG+   G   +A  + + +V    + P+VVT N +++G CK G+ D+ L +
Sbjct: 547 TIVTFNSLIDGYCLVGKMEKAFGVLDAMV-SVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M   + +  + TY   + GL +AG    A++++ EM++SG  VD  TY  ++ G CR
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665

Query: 289 AGKIKECFELWEVMGRKGC------------------------------------LNVVS 312
                E   L+  +G   C                                     NV +
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y ++IR LL+ G V+EA +++  + +  C   S     +I  L + G + KA   +++V+
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 3/232 (1%)

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS- 454
           L   T   LM+   +A + +        + R G     +   T +  LC  +R  EA   
Sbjct: 122 LTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDV 181

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF--TPDVTMYNILIHG 512
            +  M E    PD I+Y+ +I  LC   +   AL +  +  ++G   +PDV  +N +IHG
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
               G+V  A  L++ M ++  VP++ TYN+++D L K    DKA  +   ++++ + PD
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            ++YN  + G        ++ +       +G++P T+T+   + ++  +G S
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 44/260 (16%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           S+I  Y      +KA  V   M  + G E  ++         C+  + +        +  
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K +KP   +Y  V++GL+++G    A  +F EM + G   ++  Y IL+ G  +      
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 671

Query: 189 AKEIWERL----------------------------------VMETSVYPNVVTYNVMIN 214
           A  ++ +L                                  +  + + PNV TY VMI 
Sbjct: 672 AITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIR 731

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            L K G  +E   M+  M+K+     S      I  L + G++  A     ++  + I +
Sbjct: 732 NLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISL 791

Query: 275 DAVTYNAMIDGFCRAGKIKE 294
           +A T + ++  F   GK +E
Sbjct: 792 EASTTSLLMSLFSSKGKHRE 811


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 239/472 (50%), Gaps = 31/472 (6%)

Query: 165 GVETNVVCYNILIDGF-----FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           G+  N    NILI+ F        G  + AK I      +  + P +VT+  +INGL K 
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGI------KLGLQPTIVTFTTLINGLGKV 58

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           G+F + +E++D M     + D +TY + I+GLCK G    A  ++++M E+G  ++ VTY
Sbjct: 59  GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           + +I   C+  ++ E  +++  M  K     + +Y  LI+GL    +  EA ++   +  
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLAD 381
            N   +  T  VL++  CK G +  A  +L  + E G                    + +
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L + M   GCK + ++ + L+NG+ +A +++ A  LF EM  +G +P  VSYNTLI+
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC++ R  EA    K M   G  P++ TY++L++G C+   +  A +L          P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           ++ MYNIL++ +C +G ++DA +L+S +      PN+  Y T+++GL K G  D+ALE +
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT--TITW 611
            ++ ++   PD  SYN+ ++G       S A   + +   RG +    T  W
Sbjct: 419 RNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTAW 470



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 210/420 (50%), Gaps = 19/420 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN  T N++IN  C+  R D    +  +  K   +    T+ + I+GL K G    A  +
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           + +MV  G   D  TY  +I+G C+ G+      L++ M   GC LNVV+Y+ LI  L +
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
             +V+EA+ I+  ++ K+ +    T+  LI GLC                     R  +A
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN------------------FSRWKEA 169

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           ++L+N M       N  T N L++ F +  K+  A  + K M+  G  P VV+YN+L+ G
Sbjct: 170 SALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
                   EA      M+ KG KPD+ +YS+LING C++K+ID A +L  + + +G TP+
Sbjct: 230 YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN LIHGLC  G++ +A  L+ NM     +PNL TY  L+DG  K G   KA  ++ 
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +    L+P+++ YNI +  +C    + DA E  ++    G+ P    +  ++  +   G
Sbjct: 350 AMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEG 409



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 210/426 (49%), Gaps = 19/426 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL+P + ++ T+INGL K G    A+ +FD+M  RG + +   Y  +I+G  K G+   A
Sbjct: 40  GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +++++  E     NVVTY+ +I+ LCK  R +E L+++  MK  +     FTY S I 
Sbjct: 100 AGLFKKM-EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLC     + A  +  EM    I  + VT+N ++D FC+ GK+     + + M   G   
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +VV+YN L+ G     +V EA  +++++  K C  D  ++ +LING CK   +++A Q+ 
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278

Query: 369 NEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           NE+   G                  GRL +A  L   M  +G   N YT   L++GF + 
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L  A  LF+ M      P +V YN L+N +CK     +A     E+   G +P++  Y
Sbjct: 339 GYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIY 398

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +INGLC+   +D AL+        G  PD   YN++I G         A+ L   M+ 
Sbjct: 399 TTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458

Query: 532 RNCVPN 537
           R  + +
Sbjct: 459 RGFITD 464



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 183/394 (46%), Gaps = 20/394 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +   A      + E G + +V +Y T+I+ L K   +  AL +F  M  + +   
Sbjct: 90  LCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPT 149

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  Y  LI G      +  A  +   +    ++ PNVVT+NV+++  CK G+      + 
Sbjct: 150 IFTYTSLIQGLCNFSRWKEASALLNEMT-SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVL 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +   E D  TY S ++G      V  A +++  M+  G   D  +Y+ +I+G+C+A
Sbjct: 209 KTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKA 268

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +I E  +L+  M  +G   N VSYN LI GL + G++ EA  +++ +       +  T+
Sbjct: 269 KRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY 328

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++G CK GYL KA +                  L   M     K N    N L+N  
Sbjct: 329 AILLDGFCKQGYLGKAFR------------------LFRAMQSTYLKPNLVMYNILVNAM 370

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            ++  L++A  LF E+   G  P V  Y T+INGLCK     EA    + M + G  PD 
Sbjct: 371 CKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            +Y+++I G  Q K    A+ L  +   +GF  D
Sbjct: 431 FSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 182/360 (50%), Gaps = 28/360 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           ++I +  K    ++ALD+F  M        IF   + I  LC   ++++A   LN +   
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P+V ++  +++   K G +L A  V   M E GVE +VV YN L+ G+    + + A
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++++ ++ +    P+V +Y+++ING CK  R DE  ++++ M       ++ +Y + IH
Sbjct: 240 RKLFDVMITK-GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLC+ G +  A+ +++ M  +G   +  TY  ++DGFC+ G + + F L+  M       
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N+V YNIL+  + ++G + +A  ++  L       +   +  +INGLCK G L++A++  
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             +E+                   GC  + ++ N ++ GF+Q      A+ L  EM  +G
Sbjct: 419 RNMED------------------DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 124/231 (53%), Gaps = 2/231 (0%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A++  + +  KG KPDV+SY  +ING  K+  +  A  +F+EM  +G   N V YN LI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G  + G    A+++++ +    ++ PN+ TY ++++G CK G   +   ++  M+    
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNL-PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           + +   Y   ++ +CK+GN++ A  ++ E+   G+  +   Y  +I+G C+ G + E  E
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            +  M   GC  +  SYN++IRG L++     A+ +   +R++    D+ T
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 120/227 (52%)

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M+  G   N  T N L+N F Q  +++    +  +  + G  PT+V++ TLINGL KV +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           F +A     +M+ +G +PD  TY+ +INGLC+  +  +A  L  +  + G   +V  Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LIH LC   +V +AL ++S MK ++  P + TY +L+ GL       +A  + N +    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P+++++N+ +   C   ++  A   L      G+ P  +T++ L+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 111/199 (55%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G SP   + N LIN  C+++R    +S + + ++ G +P ++T++ LINGL +  K
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              A++L    + +G  PD   Y  +I+GLC  G+   A  L+  M++  C  N+VTY+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+  L K    ++AL+I++++  + + P I +Y   ++GLC+ SR  +A   LN+     
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 604 ILPTTITWHILVRAVMNNG 622
           I+P  +T+++LV      G
Sbjct: 181 IMPNVVTFNVLVDTFCKEG 199


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 252/490 (51%), Gaps = 20/490 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +     A   +N + E GL P+  +Y  +I+G  K+G++  A   + EM  +G+ ++V
Sbjct: 274 CMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSV 333

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
              N +++G+ K   +  A  ++   +   S   NV T+N +++ LCK G+ +E   +WD
Sbjct: 334 YSLNSILEGYLKCQSWQNAFTMFNDAL--ESGLANVFTFNTLLSWLCKEGKMNEACNLWD 391

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +       +  +Y + I G C+  N+  A +VY+EM+++G   +AVT+  ++DG+ + G
Sbjct: 392 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 451

Query: 291 KIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            I+  F ++  M     L    +  I+I+GL + G+  E   ++     +        + 
Sbjct: 452 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 511

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLADAA-SLVNRMDKH 392
            +I+G  K G +N A  +  E+ E G                +G   D A  L+N M + 
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K++     +L++GF +   +++A  L  E+   G SP    YN++I G   +    EA
Sbjct: 572 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 631

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               K+M+ +G   D+ TY+ LI+GL +S ++  A  +  + L KG  PD   + +LI+G
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC+ G+ E+A ++  +M  +N +P+++ YNTL+ G FK G+  +A  + + +L+  L PD
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751

Query: 573 IISYNITLKG 582
            I+Y+I + G
Sbjct: 752 NITYDILVNG 761



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 296/647 (45%), Gaps = 38/647 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAH----------------SPHLFHHILRRLIDPKLV 54
           LL  + +P +AL  F+   ++  +A                   H   ++  +    K V
Sbjct: 88  LLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFASGKSV 147

Query: 55  VHVSRILELIEIQKCY-CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRK 113
                +  L+E  K Y  P D+    I    ++ +  KA  V +   E +     +LC K
Sbjct: 148 RFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGV-ELDQEAYSIFVHLLCLK 206

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
                A   L  +   G  P   ++ +VI   VK G++  AL + D+M   G   N+   
Sbjct: 207 PNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVA 266

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             L+ G+  +G+ +R+  +    + E+ + PN VTY+V+I+G CK G  ++  E +  MK
Sbjct: 267 TSLMKGYCMQGN-LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 325

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                   ++  S + G  K  + + A  ++ + +ESG+  +  T+N ++   C+ GK+ 
Sbjct: 326 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMN 384

Query: 294 ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   LW EV+ +    NVVSYN +I G      ++ A  +++ + +     ++ T  +L+
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILM 444

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           +G  K G +  A  I + +++                    GR  +   L N+    G  
Sbjct: 445 DGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFV 504

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                 N++++GFI+   +  A  +++EM   G +P+ V+Y +LI+G CK      A   
Sbjct: 505 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 564

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + +M  KG K D+  Y  LI+G C+ + +  A +L  +    G +P+  +YN +I G  +
Sbjct: 565 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 624

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
              VE+A+ LY  M       +L TY +L+DGL K+G    A +I   +L + + PD  +
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + + GLC+  +  +A + L D   + ++P+ + ++ L+      G
Sbjct: 685 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 21/461 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    EKA  F + +  KG++  VYS  +++ G +K      A  +F++  E G+  NV
Sbjct: 309 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANV 367

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             +N L+    K+G    A  +W+  V+   + PNVV+YN +I G C+    +   +++ 
Sbjct: 368 FTFNTLLSWLCKEGKMNEACNLWDE-VIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M  N    ++ T+   + G  K G++E A  ++  M ++ I     T   +I G C+AG
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486

Query: 291 KIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +  E  +L+     +G +   + YN +I G ++ G ++ A +++  + E      + T+ 
Sbjct: 487 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 546

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-------EGRLAD----------AASLVNRMDKH 392
            LI+G CK   ++ A+++LN+++  G        G L D          A  L+N +   
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   N +  NS++ GF   + +E AI L+K+M  +G    + +Y +LI+GL K  R   A
Sbjct: 607 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 666

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                EML KG  PD   +++LINGLC   + + A K+      K   P V +YN LI G
Sbjct: 667 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
               G +++A +L+  M  R  VP+ +TY+ L++G FK GD
Sbjct: 727 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK-GD 766



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K QFE A++ L  +  K + P V  Y T+I G  K G+L  A  + DEM +RG+  +
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751

Query: 170 VVCYNILIDGFFK-KGDYMR 188
            + Y+IL++G FK  G++ R
Sbjct: 752 NITYDILVNGKFKGDGNFSR 771


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 237/488 (48%), Gaps = 21/488 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ P +     V+  L          +V+ EM + G+E ++V YN L+D FF++G   +A
Sbjct: 191 GVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQA 250

Query: 190 KEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
            ++   +        P+ VTYNV+INGL + G  ++  ++ DRM+ +++   +FT+   I
Sbjct: 251 AKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK-ASAFTFNPLI 309

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            G    G+VE A  +  EM   GI    VTYN +I G  R+G ++     +  M   G L
Sbjct: 310 TGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLL 369

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++++YN LI G  + G + EA+ ++  L+         T+ +L++G C+ G L +A + 
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
             E                  M + GC+ +  T   LMNG  +   L      F EM  K
Sbjct: 430 KQE------------------MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK 471

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P   +YNT I+    +    EA+   + M+ +G   D +TY++ ++GLC+S  +  A
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             L  + +  G  PD   Y  LIH  C  G++ +A  ++  M      P+ VTY   +  
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             + G+   A   +  +LEE +RP+ ++YN+ +  LC   R + A++  ++ L RG+ P 
Sbjct: 592 YCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651

Query: 608 TITWHILV 615
             T+ +L+
Sbjct: 652 KYTYTLLI 659



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 194/380 (51%), Gaps = 21/380 (5%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK--GCL-NVVSYNILIRG 319
           VY EM++ GI    VTYN ++D F R G++ +  +L   M  +  GCL + V+YN++I G
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L   G++++A  + + +R     A + T   LI G    G + KA  +  E+E  G    
Sbjct: 278 LARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336

Query: 376 -------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         G +  A      M   G   +  T NSL+NG+ +A  L+ A++LF 
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           ++ R G +P+V++YN L++G C++    EA  F +EM+E+G +PD+ TY++L+NG  + +
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            + M  +   + L KG  PD   YN  I      G   +A QL   M  R    + VTYN
Sbjct: 457 NLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYN 516

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
             +DGL K+G+   A  +W  ++ + L+PD I+Y   +   C   R+ +A +  +  L  
Sbjct: 517 IFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVS 576

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+ P+ +T+ + + A    G
Sbjct: 577 GLPPSAVTYTVFIHAYCRRG 596



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 226/487 (46%), Gaps = 32/487 (6%)

Query: 54  VVHVSRILELIEIQKCYC-PEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEA---- 107
           V   +++L  +E +   C P DV  +V I    +    +KA  +  RM       A    
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN 306

Query: 108 ----GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
               G   R    EKA      +  +G+ P V +Y T+I+G+ +SG++  A   F EM  
Sbjct: 307 PLITGYFARG-SVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
            G+  +++ YN LI+G+ K G+   A  ++  L     + P+V+TYN++++G C+ G  +
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDL-KRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E       M +   + D  TY   ++G  K  N+      + EM+  G+  D   YN  I
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI 484

Query: 284 DGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
                 G   E F+L EVM  +G   + V+YNI + GL ++G + +A  +W  +      
Sbjct: 485 SAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQ 544

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D  T+  LI+  C+                   GRL +A  + + M   G   +A T  
Sbjct: 545 PDCITYTCLIHAHCE------------------RGRLREARDIFDGMLVSGLPPSAVTYT 586

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
             ++ + +   L +A   F++M  +G  P  V+YN LI+ LC++ R   AY    EMLE+
Sbjct: 587 VFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P+  TY+LLI+G C+    + A++L  +  Q G  PD   +N L  G    G+ + A
Sbjct: 647 GLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHA 705

Query: 523 LQLYSNM 529
           +Q   N+
Sbjct: 706 IQYMENV 712



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 159/332 (47%), Gaps = 18/332 (5%)

Query: 295 CFELWEVMGRKGCLNVVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
           C   +  M   G    +   N+++R L +  + D+  S++  + +        T+  L++
Sbjct: 180 CLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLD 239

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
              + G +++A ++L E+E                    GC  +  T N ++NG  +  +
Sbjct: 240 SFFREGRVDQAAKLLREMEA----------------RPGGCLPSDVTYNVVINGLARKGE 283

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           LE A  L   M R     +  ++N LI G        +A +   EM  +G  P ++TY+ 
Sbjct: 284 LEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNT 342

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +I+G+ +S  ++ A     +    G  PD+  YN LI+G C AG +++AL L+ ++K+  
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P+++TYN L+DG  + GD ++A      ++E+  +PD+ +Y I + G      ++   
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           EF ++ L +G+ P    ++  + A +  G+++
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILGSTS 494


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 247/494 (50%), Gaps = 22/494 (4%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG   D   Y  V+   V       A+ +FDEM   GV+ +   Y I I G  K  D  R
Sbjct: 182 KGYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADR 241

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSF 247
           A ++  ++  E  + P   TYN +++ L K GR DE L + D+M     ++ D F   + 
Sbjct: 242 AVQVLGKM-REAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTL 300

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G C  G +  A  ++ E V  G+    VTY  +I G    G   E ++L   M  +G 
Sbjct: 301 MQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGL 360

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           L +   +N++I+GLL N + ++AI++++L+ +     D  T+G LI+ L K+  +++A+ 
Sbjct: 361 LPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVN 419

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           + ++++E G                   K +  TC+SL+ G+ +   ++ A+ L+ EM  
Sbjct: 420 LWDKMKEAG------------------VKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPG 461

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P  V+Y TL+ G  K + F +AY+ + EM + G      TY++LINGLC   ++  
Sbjct: 462 KGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCE 521

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
             ++  +F+ +GF P    YN +I+G   AG +  AL +Y  M ++   PN+VTY + +D
Sbjct: 522 VDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFID 581

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  +T  CD A+++  ++    + PDI +YN  +   C    MS A  FL   L  G+ P
Sbjct: 582 GYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTP 641

Query: 607 TTITWHILVRAVMN 620
               ++  V    N
Sbjct: 642 NVTVYNSFVTGYKN 655



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 259/532 (48%), Gaps = 21/532 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVET 168
           LC+ R  ++A + L  + E GLKP  ++Y +V++ LVK G +  AL + D+M    G + 
Sbjct: 233 LCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKM 292

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V     L+ G+   G+  +A ++++  V +  V P  VTY V+I G    G  DE  ++
Sbjct: 293 DVFLATTLMQGYCLHGEIGKALDLFDEAVRD-GVTPTNVTYTVLIKGCDAEGMTDETYKL 351

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             +M +      ++ +   I GL +    E A  ++  +V++G+  D  TY  +I    +
Sbjct: 352 CRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSK 410

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             K+ E   LW+ M   G   ++V+ + L+ G  E G +DEA+ ++  +  K    +  T
Sbjct: 411 HHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVT 470

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRMD 390
           +  L+ G  K    +KA  +LNE+ + G                   R+ +   ++ R  
Sbjct: 471 YTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFV 530

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G      T NS++NGF++A  + +A+ ++++M  KG +P +V+Y + I+G C+     
Sbjct: 531 SEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCD 590

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A   +  M   G  PD+  Y+  IN  C+   +  AL      L+ G TP+VT+YN  +
Sbjct: 591 LAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFV 650

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G  +   + +A + Y +M K+    +   Y TL+DG  K G+   ALE+++ +L     
Sbjct: 651 TGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNI 710

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           PD  ++     GLC    +  A   L+D     + P T+T+++L+ A + +G
Sbjct: 711 PDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDG 762



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 163/362 (45%), Gaps = 21/362 (5%)

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y  MV  G+  DA +   ++    R     +   L++ M  KG   +   Y++++R  + 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
                +A+ +++ +       D   + + I GLCK    ++A+Q+L ++ E G       
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAG------- 253

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS-RKGCSPTVVSYNTLIN 441
                       K   +T NS+++  ++  +++ A+ L  +M    G    V    TL+ 
Sbjct: 254 -----------LKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQ 302

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C     G+A     E +  G  P  +TY++LI G       D   KLC Q +++G  P
Sbjct: 303 GYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLP 362

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
               +N++I GL    + EDA+ L+ ++     VP++ TY  L+  L K     +A+ +W
Sbjct: 363 STYEFNLVIKGLLRNKQWEDAIALF-DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLW 421

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + + E  ++P I++ +  L G C    M +A +  ++   +G  P  +T+  L++  +  
Sbjct: 422 DKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKK 481

Query: 622 GA 623
            A
Sbjct: 482 KA 483



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           +   +A +F  S+ ++ +  D   Y T+I+G  K G++  AL ++ EM       +   +
Sbjct: 657 KMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTF 716

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
             L  G  + GD   AK + + +     V PN VTYN++IN   + G+  E  ++ D+M 
Sbjct: 717 TALTHGLCRSGDIDGAKRLLDDMT-RLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKML 775

Query: 234 KNEREKDSFTYCSF 247
            +    D  TY  F
Sbjct: 776 SSGVVPDDTTYNIF 789


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 259/513 (50%), Gaps = 26/513 (5%)

Query: 131 LKPDVYSYGTVINGLVK---SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           LKP++ +  T+I  LV+      +  + A+F ++ + GVE N   +NILI G   +    
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  +  ++    S +P+ V+YN +++ LCK G+ +E  ++   MK N    +  T+   
Sbjct: 66  EAIGLIGKM-KHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNIL 124

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G CK G ++ A  V   M  + +  D  TY  +I G C+ GKI E F L + M     
Sbjct: 125 VSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL 184

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           L +VV+YN+LI G  E     +   + + +  K    ++ T+ V++    K G ++ A  
Sbjct: 185 LPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L ++EE G                  GRL++A  +++ M + G K+N+ T N++++   
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              KL++A  L    S++G     VSY TLI G  KV   G++  +  EM EK   P +I
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKV---GKSXXW-DEMKEKEIIPSII 360

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY  +I GLC+S K D ++  C + L+ G  PD T YN +I G C  G+V+ A    + M
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K++  P+L T N L+ GL   G  DKAL+++   + +    D +++N  + GLC   R 
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRF 480

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +AF+ L +   + + P   T + ++ A+ + G
Sbjct: 481 EEAFDLLAEMEEKKLGPDCYTHNAILSALADAG 513



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 223/467 (47%), Gaps = 47/467 (10%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC+  + ++A R  + +    L P V +Y  +ING  +    L    + DEM  +GV+
Sbjct: 161 GGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVK 220

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V YN+++  + K+G    A     R + E+   P+ VT+N + NG CK GR  E   
Sbjct: 221 PNAVTYNVVVKWYVKEGKMDNAGNEL-RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFR 279

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M D M +   + +S T  + +H LC    ++ A ++     + G FVD V+Y  +I G+ 
Sbjct: 280 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 339

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + GK       W+ M  K  + ++++Y  +I GL  +GK D++I     L E     D T
Sbjct: 340 KVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQT 395

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  +I G C+ G ++KA                      N+M K   K + +TCN L+ 
Sbjct: 396 TYNTIILGYCREGQVDKAFH------------------FRNKMVKKSFKPDLFTCNILVR 437

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G      L+ A+ LFK    KG +   V++NT+I+GLC+  RF EA+  + EM EK   P
Sbjct: 438 GLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGP 497

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM--------------------- 505
           D  T++ +++ L  + ++  A +     +++G   D T+                     
Sbjct: 498 DCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNS 557

Query: 506 --YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             ++  I+ LC+ GK +DA+ +     ++  + +  TY +LM+GL K
Sbjct: 558 VAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           +N  ++NILI G     K+ EAI +   ++  +C  D+ ++  +++ LCK G LN+A  +
Sbjct: 46  VNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDL 105

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L +                  M  +G   N  T N L++G+ +   L+ A  +   M+R 
Sbjct: 106 LLD------------------MKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARN 147

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P V +Y TLI GLCK  +  EA+    EM      P ++TY++LING  +       
Sbjct: 148 NVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKG 207

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  +   KG  P+   YN+++      GK+++A      M++    P+ VT+NTL +G
Sbjct: 208 FELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNG 267

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K G   +A  + + +  + L+ + ++ N  L  LC   ++ DA++ L+ A  RG    
Sbjct: 268 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVD 327

Query: 608 TITWHILVRAVMNNGAS 624
            +++  L+      G S
Sbjct: 328 EVSYGTLIMGYFKVGKS 344



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 25/244 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G   G LCR  + +++    N L E GL PD  +Y T+I G  + G +  A    ++M 
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++  + ++   NIL+ G   +G   +A ++++  + +     + VT+N +I+GLC+ GRF
Sbjct: 422 KKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAI-DAVTFNTIISGLCEEGRF 480

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD------- 275
           +E  ++   M++ +   D +T+ + +  L  AG ++ AE     +VE G   D       
Sbjct: 481 EEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNK 540

Query: 276 ----------------AVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
                           +V ++  I+  C  GK K+   + +   +KG  L+  +Y  L+ 
Sbjct: 541 RKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLME 600

Query: 319 GLLE 322
           GL++
Sbjct: 601 GLIK 604



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 3/197 (1%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAY---SFVKEMLEKGWKPDMITYSLLINGLCQ 480
           M R    P +++ NTLI  L +       Y   +   ++++ G + +  T+++LI G C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             K+  A+ L  +       PD   YN ++  LC  GK+ +A  L  +MK     PN  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           +N L+ G  K G   +A E+ + +    + PD+ +Y   + GLC   ++ +AF   ++  
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 601 CRGILPTTITWHILVRA 617
              +LP  +T+++L+  
Sbjct: 181 NLKLLPHVVTYNMLING 197


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 224/442 (50%), Gaps = 30/442 (6%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  +N ++    +  D      I+  +    SV P+VVTY +++NGLCK GR  + L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 229 WDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES--GIFVDAVTYNAMID 284
            D M + + +   D  T  + + GLCK+G V+ A     + + S  G   + VTYN +ID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC-- 341
            FCR G I   +EL E M  +G   N+V+ N ++ GL   G+   A+   E  REK    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL---EFFREKRTVW 311

Query: 342 ---NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLAD 381
                ++ T+  L+  L     +  A+++ +E    G                  GRL D
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A S+ + M + G KL+    N L+ GF +  +L  A  L +EM   G  P V +YNTL++
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK   F      + +M++ G +P +IT+  L++G C+  KID AL++     + G  P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI  LC  G V+ A++L+  MK+++   N+ T+N L+ GL      +KA E+ 
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELM 551

Query: 562 NHILEERLRPDIISYNITLKGL 583
           + + EER  PD ++ ++ ++ L
Sbjct: 552 DQMREERCFPDYVTVDVLMEWL 573



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 239/497 (48%), Gaps = 32/497 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKP-DVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGV 166
           +L R    E A RFL +    G    DV+++ +++  L +  D+ G   ++  M     V
Sbjct: 109 LLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMARIYALMQGCASV 168

Query: 167 ETNVVCYNILIDGFFKKG---DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
             +VV Y IL++G  K G   D +R  +   R   +  + P+VVT N +++GLCK GR  
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSR--QDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 224 ECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           E L   ++   +      ++ TY   I   C+ GN+  A  +  +M   G+  + VT N 
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 282 MIDGFCRAGKIKECFELWE---VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           ++ G CRAG+     E +     +  +G  N V+Y+ L+  LL    V  A+ ++     
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLAD 381
           +  + D+  +  +I+GL + G L  A  + + ++E G                 + RL +
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L+  M + G + +  T N+L++G  +A        L  +M   GC P+V+++ TL++
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CKV +  EA   ++ M E G  P+ + Y+ LI+ LC+   +D+A++L  +  +K    
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA---L 558
           +VT +N L+ GL      E A +L   M++  C P+ VT + LM+ L   G+ D+    +
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586

Query: 559 EIWNHILEERLRPDIIS 575
           +   H   +R+  D  S
Sbjct: 587 QQGEHTASKRIVSDRTS 603



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 199/406 (49%), Gaps = 25/406 (6%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           D F + S +  L +  +V G  R+Y  M   + +  D VTY  +++G C+AG++ +   +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 299 WEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADSTTHGVLIN 353
            + M R+      +VV+ N ++ GL ++G+V EA++  E  +     C  ++ T+  LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 354 GLCKNGYLNKAIQILNEVE-EGGEGRLADAASLVN---RMDKHGCKL------------- 396
             C+ G ++ A +++ ++E EG    +    ++V    R  + G  L             
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 397 --NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             NA T ++L+   +  + +  A+ LF E   +G SP  + Y T+I+GL +  R  +A S
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M E G+K D   Y++LI G C+ K++  A +L  +  + G  PDV  YN L+ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            AG      +L   M    C P+++T+ TL+ G  K G  D+AL I   + E  + P+ +
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            YN  +  LC    +  A E  ++   + +     T++ L++ + +
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 2/273 (0%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G L        A    +    +G  PD   Y T+I+GL ++G L  A ++   M E G +
Sbjct: 326 GALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFK 385

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   YNILI GF +K     A E+ + +  E  + P+V TYN +++G CK G F    E
Sbjct: 386 LDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  +M  +  +    T+ + +HG CK G ++ A R+ R M ESGI  + V YN +ID  C
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G +    EL++ M  K    NV ++N L++GL +    ++A  + + +RE+ C  D  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYV 564

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           T  VL+  L   G  ++  + + + E     R+
Sbjct: 565 TVDVLMEWLPVIGETDRLKRFMQQGEHTASKRI 597



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 37/388 (9%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALD-VFQRMNEIFGCEAGIL---------CRKRQFEKAK 120
           P+ V L +V+    K+    +AL  V QRM+ + GC    +         CR      A 
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV----ETNVVCYNIL 176
             +  +  +G+  ++ +  T++ GL ++G    AL  F E  +R V    + N V Y+ L
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTL 324

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           +       +   A E++   + E    P+ + Y  MI+GL + GR ++   M   MK+  
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGH-SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAG 383

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
            + D+  Y   I G C+   +  A  + +EM E GI  D  TYN ++ G C+AG      
Sbjct: 384 FKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD 443

Query: 297 ELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL   M   GC  +V+++  L+ G  + GK+DEA+ I   + E   + ++  +  LI+ L
Sbjct: 444 ELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFL 503

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G ++ AI++ +E++E                       N  T N+L+ G    +  E
Sbjct: 504 CKRGDVDLAIELFDEMKE------------------KSVPANVTTFNALLKGLRDKNMPE 545

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            A  L  +M  + C P  V+ + L+  L
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG      C+  + ++A R L S+ E G+ P+   Y T+I+ L K GD+  A+ +FDEM 
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMK 520

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+ V  NV  +N L+ G   K    +A E+ +++  E   +P+ VT +V++  L   G  
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGET 579

Query: 223 D 223
           D
Sbjct: 580 D 580


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 247/493 (50%), Gaps = 26/493 (5%)

Query: 104 GCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE 163
           GC+AG+        +A   L  ++  G KP V +Y T I+GL K G++  AL +   +  
Sbjct: 332 GCDAGM-------RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHY 384

Query: 164 RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
                N   +N +I GF K+G+   A ++ E +   + + P+V +Y+++IN  C  G   
Sbjct: 385 TNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEM-KSSGILPDVYSYSILINAFCGKGDVM 443

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           +CL++ + M+ ++ +    +Y S IHGLCK   ++ A  ++  +  S    D+  Y  +I
Sbjct: 444 KCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLI 503

Query: 284 DGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DGFC  G +    +L E M   +      S   LIRG  + G  D+A+ ++  +      
Sbjct: 504 DGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIW 563

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
            D+     +++G C+ GY  +A+ +L + +E G                 EG    A  L
Sbjct: 564 PDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALEL 623

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           + RM K     +    ++L++GF + S  + A+ LF  M + G +  + +Y  L++    
Sbjct: 624 LPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSH 683

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             +  EAY   KEM E+G   D I+Y+ LI G C ++++  A  L  +  ++G +P+V  
Sbjct: 684 SHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVIT 743

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  +I G C + +++ A  ++  M + + +P++VTY  L+D   K G  D+A ++++ + 
Sbjct: 744 YTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMK 803

Query: 566 EERLRPDIISYNI 578
           ++ + PD I++N+
Sbjct: 804 DKGVLPDDITHNV 816



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 257/568 (45%), Gaps = 54/568 (9%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +I  +  NSM + ALDVF     +                           GL+PD+ + 
Sbjct: 253 LISVFASNSMLENALDVFSNAKHV---------------------------GLEPDIRTC 285

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY-----MRAKEIW 193
             ++  LV++  +     VF+E+ +RG   N+  Y I+++  F   D      MR   + 
Sbjct: 286 NFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMN--FYCSDVGCDAGMRQAAVI 343

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
              +  +   P VVTY+  I+GLCK G  +  L +   +    +  +S ++   I+G CK
Sbjct: 344 LGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCK 403

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            G V  A +V  EM  SGI  D  +Y+ +I+ FC  G + +C +L E M       ++VS
Sbjct: 404 RGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVS 463

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-- 370
           Y  LI GL +   +  A+ I+  +   +C  DST +  LI+G C  G ++ AI++L E  
Sbjct: 464 YTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMI 523

Query: 371 ----VEEGGE-----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
               V                G    A  + N M + G   +   CN +++G  +A   +
Sbjct: 524 CNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFK 583

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L ++    G +    SYN +I  LCK      A   +  ML++   P ++ YS LI
Sbjct: 584 EALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLI 643

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +G  +      A+ L  + ++ G T ++  Y IL+     + K+ +A  ++  MK+R   
Sbjct: 644 SGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLC 703

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            + ++Y TL+ G     +  KA  ++  +  E   P++I+Y   + G C  +R+ D   +
Sbjct: 704 LDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRI-DLATW 762

Query: 596 LNDALCR-GILPTTITWHILVRAVMNNG 622
           + D + R  ++P  +T+ +L+     +G
Sbjct: 763 VFDKMNRDSVIPDVVTYTVLIDWYHKHG 790



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 254/549 (46%), Gaps = 33/549 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           ++ A+    M    L+V+  + +I G C      +   FE    FL+S   + ++     
Sbjct: 198 IVHAFALAGM---RLEVWALLRDIVGFCNEA---KYDTFELFSAFLDS--PQHVERSGVV 249

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           +  +I+    +  L  AL VF      G+E ++   N L+    +       + ++E L 
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL- 308

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLE----MWDRMKKNEREKDSFTYCSFIHGLCK 253
            +    PN+ TY +M+N  C     D  +     +  ++ ++  +    TY ++IHGLCK
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCK 368

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            GNVE A  + R +  +   +++ ++N +I GFC+ G++ E  ++ E M   G L +V S
Sbjct: 369 VGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYS 428

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y+ILI      G V + + + E +          ++  LI+GLCK   L  A+ I + + 
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI- 487

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                     AS         CK ++    +L++GF     +++AI L +EM      PT
Sbjct: 488 ---------GAS--------SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPT 530

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
             S  +LI G  K+  F +A      ML  G  PD I  + +++G C++     AL L  
Sbjct: 531 AFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLE 590

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
            F + GF  +   YN +I+ LC  G  E AL+L   M KRN +P++V Y+TL+ G  K  
Sbjct: 591 DFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQS 650

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           +  +A+ ++  +++  +  +I +Y I +       +M +A+    +   RG+    I++ 
Sbjct: 651 NFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYT 710

Query: 613 ILVRAVMNN 621
            L+    NN
Sbjct: 711 TLIVGFCNN 719



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 10/283 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           S+I+ Y K  + D+AL+VF  M       +   C   +   CR   F++A   L    E 
Sbjct: 536 SLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEH 595

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   + +SY  +I  L K G    AL +   M +R V  +VV Y+ LI GF K+ ++ RA
Sbjct: 596 GFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRA 655

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ R+V +  +  N+ TY ++++      +  E   ++  MK+     D  +Y + I 
Sbjct: 656 VNLFTRMV-KVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIV 714

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C    ++ A  ++ EM   G   + +TY  +IDGFC++ +I     +++ M R   + 
Sbjct: 715 GFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIP 774

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +VV+Y +LI    ++G  D+A  +++++++K    D  TH VL
Sbjct: 775 DVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 283 IDGFCRAGKIKECFELWEV-------MGRKGCLNVVSYNILIRGLLENGKVDEAISIWEL 335
           I GFC   K  + FEL+         + R G    V +++LI     N  ++ A+ ++  
Sbjct: 218 IVGFCNEAKY-DTFELFSAFLDSPQHVERSG----VVFDVLISVFASNSMLENALDVFSN 272

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
            +      D  T   L+  L +   +    ++  E+++ G                    
Sbjct: 273 AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSP----------------- 315

Query: 396 LNAYTCNSLMNGFIQA----SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            N YT   +MN +       + +  A  +  ++ R G  PTVV+Y+T I+GLCKV     
Sbjct: 316 -NIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEA 374

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++ +       +  +++ +I G C+  ++  AL++  +    G  PDV  Y+ILI+
Sbjct: 375 ALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILIN 434

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G V   L L   M+     P++V+Y +L+ GL K      A++I++ I     + 
Sbjct: 435 AFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKY 494

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           D   Y   + G C    M  A + L + +C  ++PT  +   L+R     G
Sbjct: 495 DSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLG 545


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 176/712 (24%), Positives = 296/712 (41%), Gaps = 116/712 (16%)

Query: 3   ISAKRLLNLLKAEK---NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +A     +P TALA F+   R PG+ H+      +L+ L   +   +  +
Sbjct: 48  VTAAHVADLFRAPVSPLDPATALAFFECVARRPGFRHTAASHAALLQLLARRRAPANYDK 107

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------- 109
           ++               LS+I   G      +A+D  Q +  + G    +          
Sbjct: 108 LV---------------LSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALR 152

Query: 110 -LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            L R    E   +  + L ++GL PD  +Y T+I    K G L  A   F  + E G++ 
Sbjct: 153 SLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQM 212

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLE 227
           +    N L+ G+ +  D  +A   W  ++M       N  +Y ++I GLC+     E L 
Sbjct: 213 DTYTCNALLLGYCRTSDLRKA--CWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALV 270

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   M  +    +  TY   I GLCK G +  A  +  EM   G+     TYNAMIDG+C
Sbjct: 271 LVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYC 330

Query: 288 RAGKIKECFELWEVMGRKGC-------------------------LN----------VVS 312
           ++G++K+   +  +M + GC                         LN          V++
Sbjct: 331 KSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVIT 390

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +  LI G  +  ++D+A+ +   +   NC  D   +GVLIN L K   L +A + LNE+ 
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
             G                  G +  A  +   M+  GC  NA+T  SL+ G IQ  KL 
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ L  +M   G +P V++Y TLI G CK   F  A+   + M + G  PD   Y++L 
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 476 NGLCQSKK--------------------------------IDMALKLCCQFLQKGFTPDV 503
           + LC+S +                                 D A  L  + + +G   D+
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y++L+  LC   K+ +AL +   M       N+V Y  ++  + K G  D A  ++N 
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++    +P   +Y + +   C   R+ +A   + +    G+ P  +T++I +
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFI 742



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 253/546 (46%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + + A R  +++     K D+ +YG +IN L+K   L  A    +EMF  G+  NV
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +IDG+ K G    A E++ +L+     +PN  TY  +I GL +  +  + + +  
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVF-KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++       TY + I G CK    + A R++  M ++G+  D   YN + D  C++G
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V+Y  L+ G  + G  D A  + E +  + C AD  T+ 
Sbjct: 578 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL+  LCK   LN+A+ IL+++   G                 EG+   A SL N M   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    ++ + +  ++E A  L  EM R G +P VV+YN  ING   +     A
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRA 754

Query: 453 YSFVKEMLEKGWKPDMITYSLLI----------------NGLCQSKKIDMALKLCCQFLQ 496
           +S +K M++   +P+  TY LL+                +G+    +++M  +L  + ++
Sbjct: 755 FSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMK 814

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P V  Y+ +I G C A ++E+A  L  +M  ++  PN   Y  L+          K
Sbjct: 815 HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGK 874

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A+     ++E   +P + SY+  + GLC       A     D L        + W IL  
Sbjct: 875 AVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILND 934

Query: 617 AVMNNG 622
            ++  G
Sbjct: 935 GLLKAG 940



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 258/540 (47%), Gaps = 39/540 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +   A+  L+ +  +G+ P V++Y  +I+G  KSG +  AL +   M + G   +
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI G    G    A+E+    +      P V+T+  +ING CK  R D+ L + 
Sbjct: 354 DWTYNSLIYGLCG-GKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAERIDDALRVK 411

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  +  + D   Y   I+ L K   ++ A+    EM  +G+  + VTY ++IDG+C+ 
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKV 471

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    E++++M  +GC  N  +Y  LI GL+++ K+ +A+++   ++E        T+
Sbjct: 472 GMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITY 531

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G CK    + A ++   +E+ G                  GR  +A S + R   
Sbjct: 532 TTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR--- 588

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  L   T  SL++GF +A   + A  L ++M  +GC   + +Y+ L+  LCK ++  E
Sbjct: 589 KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNE 648

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S + +M   G K +++ Y+++I+ + +  K D A  L  + +  G  P  T Y + I 
Sbjct: 649 ALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFIS 708

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++E+A  L   M++    P++VTYN  ++G    G  D+A      +++    P
Sbjct: 709 SYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEP 768

Query: 572 DIISYNITLK----------------GLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  +Y + LK                G+ +   ++  ++ L   +  G+ PT +T+  ++
Sbjct: 769 NCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSII 828



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 288/639 (45%), Gaps = 62/639 (9%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDV 95
           SP  ++  LR L+   +  ++ ++   + +Q+   P+ V   ++I AY K      A   
Sbjct: 143 SPKCYNLALRSLLRFDMTEYMGKLYSHL-VQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 96  FQRMNE------IFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           F  + E       + C A +L  CR     KA   L  +   G + + YSY  +I GL +
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCE 261

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           +  +  AL +   M   G   N+  Y +LI G  K+G    A+ + + + +   V P+V 
Sbjct: 262 ARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLR-GVVPSVW 320

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TYN MI+G CK GR  + L +   M++N    D +TY S I+GLC  G ++ AE +    
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
           +  G     +T+  +I+G+C+A +I +   +   M    C L++ +Y +LI  L++  ++
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
            EA      +       +  T+  +I+G CK G +  A+++   +E  G           
Sbjct: 440 KEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 + +L  A +L+ +M + G      T  +L+ G  +  + +NA  LF+ M + G 
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSF--------------------------------VK 457
           +P   +YN L + LCK  R  EAYSF                                ++
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M+ +G K D+ TYS+L+  LC+ KK++ AL +  Q    G   ++  Y I+I  +   G
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           K + A  L++ M      P+  TY   +    K G  ++A  +   +  + + PD+++YN
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           I + G      +  AF  L   +     P   T+ +L++
Sbjct: 740 IFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLK 778



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 240/502 (47%), Gaps = 23/502 (4%)

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------- 110
           + +L+E + C+       S+I    ++    KA+ +  +M E  G   G++         
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVITYTTLIQGQ 538

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +F+ A R    + + GL PD  +Y  + + L KSG    A   +  +  +GV    
Sbjct: 539 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTK 595

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  L+DGF K G+   A  + E++V E     ++ TY+V++  LCK  + +E L + D
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADLYTYSVLLQALCKQKKLNEALSILD 654

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  +  + +   Y   I  + K G  + A+ ++ EM+ SG    A TY   I  +C+ G
Sbjct: 655 QMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I+E   L   M R G   +VV+YNI I G    G +D A S  + + + +C  +  T+ 
Sbjct: 715 RIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYW 774

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEG---RLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+    K   +N      + V+  G      L     L+ RM KHG      T +S++ 
Sbjct: 775 LLLKHFLKMSLINA-----HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A++LE A  L   M  K  SP    Y  LI   C ++ FG+A SFV +M+E G++P
Sbjct: 830 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 889

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y  LI GLC     D A  L C  L   +  +   + IL  GL  AG V+   QL 
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 527 SNMKKRNCVPNLVTYNTLMDGL 548
           + M  R+C  +  +Y+ L D +
Sbjct: 950 AAMDNRHCRIDSESYSMLTDSI 971



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 254/592 (42%), Gaps = 84/592 (14%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQF 116
           I + + P  +  + +I  Y K    D AL V   M         + +G    +L +K + 
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++AK  LN ++  GL P+V +Y ++I+G  K G +  AL VF  M   G   N   Y  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  +     +A  +  ++  E  + P V+TY  +I G CK   FD    +++ M++N 
Sbjct: 500 IYGLIQDKKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNG 558

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y      LCK+G    AE  Y  +V  G+ +  VTY +++DGF +AG      
Sbjct: 559 LTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAA 615

Query: 297 ELWEVMGRKGC------------------------------------LNVVSYNILIRGL 320
            L E M  +GC                                     N+V+Y I+I  +
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEM 675

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           ++ GK D A S++  +        +TT+ V I+  CK G + +A  ++ E+E  G     
Sbjct: 676 IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDV 735

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF---- 419
                        G +  A S + RM    C+ N +T   L+  F++ S L NA +    
Sbjct: 736 VTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS-LINAHYVDTS 794

Query: 420 -------------LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
                        L + M + G +PTVV+Y+++I G CK  R  EA   +  ML K   P
Sbjct: 795 GMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISP 854

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +   Y++LI   C  K    A+      ++ GF P +  Y+ LI GLC  G  + A  L+
Sbjct: 855 NEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            ++   +   N V +  L DGL K G  D   ++   +     R D  SY++
Sbjct: 915 CDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSM 966



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 210/432 (48%), Gaps = 19/432 (4%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN+ +  L +    +   +++  + +     D+ TY + I   CK G++  A R +  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           ESG+ +D  T NA++ G+CR   +++   L  +M   GC  N  SY ILI+GL E   V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           EA+ +  ++    C+ +  T+ +LI GLCK G ++ A  +L+E+   G            
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR+ DA  +   M+++GC  + +T NSL+ G     KL+ A  L      +G +
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           PTV+++  LING CK ER  +A      M+    K D+  Y +LIN L +  ++  A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  P+V  Y  +I G C  G V  AL+++  M+   C PN  TY +L+ GL +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                KA+ +   + E+ + P +I+Y   ++G C      +AF         G+ P    
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565

Query: 611 WHILVRAVMNNG 622
           +++L  A+  +G
Sbjct: 566 YNVLTDALCKSG 577


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 259/520 (49%), Gaps = 34/520 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +R+   A+R L++L   G   D  S+ T++ G  + G L  A              N
Sbjct: 122 LCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADA-ERLLAAAGLSGAAN 179

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G+ + G    A      L+    V P+  TYN ++ GLC   ++++   + 
Sbjct: 180 VVTYTTLINGYCRSGRLADALA----LIASMPVAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +N    +  T+ + I   C+ G ++ A ++   M + G   D V Y+ +++GF   
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G++ +  EL   M  K   N + YN  ++GL    + ++   +   +  K+C  +  T  
Sbjct: 296 GRVDDAIELLNGMLCKP--NTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFS 353

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           +L + LC+NG ++ A+++L ++ + G                 +GR+ DA  L+N M   
Sbjct: 354 MLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP-- 411

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  +  + N+ + G  +A + ++A  L  +M R+ C    +++N LI+ LC+  R   A
Sbjct: 412 -CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNA 470

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               ++M + G  PD++TYS LINGL +   ++ A++L   F      PD+  YN ++ G
Sbjct: 471 IEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIEL---FQSMPCKPDIFGYNAVLKG 527

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC A + EDA +L SNM +++C PN +T+N L++ L + G  D+A+E++  + +    PD
Sbjct: 528 LCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPD 587

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
           I +YN  + G     R+ DA   L+   C+   P  ++++
Sbjct: 588 IFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYN 624



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 241/468 (51%), Gaps = 32/468 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  RQ+E A+  +  +      P+  ++ T I    ++G L  A+ + D M + G   +
Sbjct: 222 LCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPD 281

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ L++GF ++G    A E+   ++ +    PN + YN  + GLC   R+++  ++ 
Sbjct: 282 VVIYSTLVNGFSEQGRVDDAIELLNGMLCK----PNTICYNAALKGLCIAQRWEDVGQLI 337

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M + +   +  T+      LC+ G V+ A  V  +M + G   DAV YN +I  F   
Sbjct: 338 VEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQ 397

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS-IWELLREKNCNADSTTH 348
           G++ +  +L   M      +V+S+N  ++GL    + D+A   I ++LRE +C     T 
Sbjct: 398 GRVDDALKLLNSM--PCSPDVISFNAALKGLCRAERWDDAEELIVQMLRE-DCPLIEMTF 454

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+ LC+NG +N AI++  +                  M K+GC  +  T +SL+NG 
Sbjct: 455 NILIDSLCQNGRVNNAIEVFEQ------------------MPKYGCTPDIVTYSSLINGL 496

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +E+AI LF+ M    C P +  YN ++ GLC+  R+ +A   +  M  K   P+ 
Sbjct: 497 SEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNE 553

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           IT+++LIN LCQ   +D A+++  Q  + G TPD+  YN LI+G    G+++DA +L S 
Sbjct: 554 ITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLST 613

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           M   +C P+ V+YN+ + GL +     +A E+   +L  +  P+ +++
Sbjct: 614 M---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 238/489 (48%), Gaps = 34/489 (6%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V +   +I  L     L  A  V D +   G   + V +N L+ G+ + G    A+ +  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGA-ADPVSHNTLVAGYCRDGRLADAERLLA 170

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
              +  +   NVVTY  +ING C+ GR  + L +   M       D++TY + + GLC A
Sbjct: 171 AAGLSGAA--NVVTYTTLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGA 225

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
              E AE +  EMV +    + VT+   I  FC+ G +    +L + M + GC  +VV Y
Sbjct: 226 RQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIY 285

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           + L+ G  E G+VD+AI   ELL    C  ++  +   + GLC                 
Sbjct: 286 STLVNGFSEQGRVDDAI---ELLNGMLCKPNTICYNAALKGLCI---------------- 326

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               R  D   L+  M +  C  N  T + L +   Q   ++ A+ + ++M + GC P  
Sbjct: 327 --AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDA 384

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V YNTLI    +  R  +A   +  M      PD+I+++  + GLC++++ D A +L  Q
Sbjct: 385 VIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQ 441

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L++        +NILI  LC  G+V +A++++  M K  C P++VTY++L++GL + G 
Sbjct: 442 MLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGL 501

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            + A+E++  +     +PDI  YN  LKGLC  +R  DA E +++   +   P  IT++I
Sbjct: 502 VESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNI 558

Query: 614 LVRAVMNNG 622
           L+ ++   G
Sbjct: 559 LINSLCQKG 567



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 222/444 (50%), Gaps = 33/444 (7%)

Query: 100 NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           NE+ F  +    C+    ++A + L+ + + G  PDV  Y T++NG  + G +  A+ + 
Sbjct: 246 NEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELL 305

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           + M     + N +CYN  + G      +    ++   +V +  + PN  T++++ + LC+
Sbjct: 306 NGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL-PNEATFSMLTSCLCQ 361

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  D  +E+ ++M K     D+  Y + I+   + G V+ A ++   M  S    D ++
Sbjct: 362 NGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSP---DVIS 418

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +NA + G CRA +  +  EL   M R+ C L  +++NILI  L +NG+V+ AI ++E + 
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMP 478

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +  C  D  T+  LINGL + G +  AI++   +                      CK +
Sbjct: 479 KYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---------------------CKPD 517

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +  N+++ G  +A++ E+A  L   M+RK C P  +++N LIN LC+      A    +
Sbjct: 518 IFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFE 577

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M + G  PD+ TY+ LING  +  ++D A +L      K   PD   YN  + GLC A 
Sbjct: 578 QMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAE 634

Query: 518 KVEDALQLYSNMKKRNCVPNLVTY 541
           + ++A ++ + M +  C PN VT+
Sbjct: 635 RWKEAEEVVAEMLRMKCPPNEVTF 658


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 224/442 (50%), Gaps = 30/442 (6%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  +N ++    +  D      I+  +    SV P+VVTY +++NGLCK GR  + L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 229 WDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVES--GIFVDAVTYNAMID 284
            D M + + +   D  T  + + GLCK+G V+ A     + + S  G   + VTYN +ID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC-- 341
            FCR G I   +EL E M  +G   N+V+ N ++ GL   G+   A+   E  REK    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL---EFFREKRTVW 311

Query: 342 ---NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLAD 381
                ++ T+  L+  L     +  A+++ +E    G                  GRL D
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A S+ + M + G KL+    N L+ GF +  +L  A  L +EM   G  P V +YNTL++
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK   F      + +M++ G +P +IT+  L++G C+  KID AL++     + G  P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +  +YN LI  LC  G V+ A++L+  MK+++   N+ T+N L+ GL      +KA E+ 
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELM 551

Query: 562 NHILEERLRPDIISYNITLKGL 583
           + + EER  PD ++ ++ ++ L
Sbjct: 552 DQMREERCFPDYVTVDVLMEWL 573



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 215/426 (50%), Gaps = 28/426 (6%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER--GVETNVVCYNILIDGFFKKGDYMR 188
           ++PDV +YG ++NGL K+G +  AL V D M  +   +  +VV  N ++DG  K G    
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 189 AKEIWERLVMETSVY---PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           A    E+ +  +SV+   PN VTYN +I+  C+ G      E+ ++M+     ++  T  
Sbjct: 228 ALAFVEQRM--SSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLN 285

Query: 246 SFIHGLCKAGNVEGAERVYRE--MVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVM 302
           + + GLC+AG    A   +RE   V      +AVTY+ ++        +    EL+ E M
Sbjct: 286 TIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 303 GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
                 + + Y  +I GL + G++++A S+   ++E     D+  + +LI G C+   L+
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A ++L E++E                   G + +  T N+L++G  +A        L  
Sbjct: 406 EAYELLQEMKE------------------VGIRPDVCTYNTLLSGSCKAGDFAAVDELLG 447

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           +M   GC P+V+++ TL++G CKV +  EA   ++ M E G  P+ + Y+ LI+ LC+  
Sbjct: 448 KMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRG 507

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +D+A++L  +  +K    +VT +N L+ GL      E A +L   M++  C P+ VT +
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVD 567

Query: 543 TLMDGL 548
            LM+ L
Sbjct: 568 VLMEWL 573



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 186/386 (48%), Gaps = 30/386 (7%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           D F + S +  L +  +V G  R+Y  M   + +  D VTY  +++G C+AG++ +   +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 299 WEVMGRKGC---LNVVSYNILIRGLLENGKVDEAISIWE--LLREKNCNADSTTHGVLIN 353
            + M R+      +VV+ N ++ GL ++G+V EA++  E  +     C  ++ T+  LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
             C+ G ++ A +                  LV +M+  G   N  T N+++ G  +A +
Sbjct: 255 AFCRVGNISMAYE------------------LVEKMENEGVPQNIVTLNTIVGGLCRAGR 296

Query: 414 LENAIFLFKEMSRKGCSP----TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
              A+  F+E  ++   P      V+Y+TL+  L      G A     E + +G  PD I
Sbjct: 297 TGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  +I+GL Q+ +++ A  +     + GF  D   YNILI G C   ++ +A +L   M
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K+    P++ TYNTL+ G  K GD     E+   ++++  +P +I++   + G C   ++
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +A   L      GI P  + ++ L+
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLI 500



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 174/400 (43%), Gaps = 60/400 (15%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFE--RG 165
           LC+  +   A R L+ +  + L  +PDV +  TV++GL KSG +  ALA  ++      G
Sbjct: 182 LCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG 241

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
              N V YN LID F + G+   A E+ E++  E  V  N+VT N ++ GLC+ GR    
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENE-GVPQNIVTLNTIVGGLCRAGRTGAA 300

Query: 226 LE-------MWDRMKKNE------------------------------REKDSFTYCSFI 248
           LE       +W   K N                                  D+  Y + I
Sbjct: 301 LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
            GL +AG +E A  +   M E+G  +D   YN +I GFCR  ++ E +EL + M   G  
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V +YN L+ G  + G       +   + +  C     T G L++G CK G +++A++I
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           L  ++E G                  G +  A  L + M +     N  T N+L+ G   
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            +  E A  L  +M  + C P  V+ + L+  L  +E  G
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIELQG 580



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 2/246 (0%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G L        A    +    +G  PD   Y T+I+GL ++G L  A ++   M E G +
Sbjct: 326 GALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFK 385

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +   YNILI GF +K     A E+ + +  E  + P+V TYN +++G CK G F    E
Sbjct: 386 LDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +  +M  +  +    T+ + +HG CK G ++ A R+ R M ESGI  + V YN +ID  C
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G +    EL++ M  K    NV ++N L++GL +    ++A  + + +RE+ C  D  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYV 564

Query: 347 THGVLI 352
           T  VL+
Sbjct: 565 TVDVLM 570



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG      C+  + ++A R L S+ E G+ P+   Y T+I+ L K GD+  A+ +FDEM 
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMK 520

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           E+ V  NV  +N L+ G   K    +A E+ +++  E   +P+ VT +V++
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLM 570


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 235/464 (50%), Gaps = 20/464 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C + +   A    + +   G + D+  YG +IN L K+     A+ +   M       N
Sbjct: 19  MCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGN 78

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y ++ID   K G  ++  +++  ++    + PNV+ Y+ +INGLC+ G+  E + ++
Sbjct: 79  FFTYGLVIDSLCKDGLAIKGLKMFREMI-NMGICPNVIVYSSLINGLCRVGKLREAVNLF 137

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     + +  TY S IH  C+ G  + A R + +MV  GI  D VT+  +ID   + 
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK++E ++++E+M ++G   N+V+YN L+ GL  + ++D A+ ++E++ E+    D  ++
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C +G                  +  +A +L  +M       +  T   L+   
Sbjct: 258 NTLINGYCTSG------------------KTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            Q  ++  A  LF  M   G SP++ +Y  L++GLCK     EA    + +    +KP +
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             YS+LI G+ Q+++ + A+++  +    G  P++  YNI+I+GLC  GK+ +A +L+  
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           M++  C  + +++N ++ G  +     KA+E    + E+   P+
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 253/499 (50%), Gaps = 20/499 (4%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + G +P++ +  T++ G+   G ++ AL +FD+M   G + +++ Y  LI+   K     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           RA E+  R++ E     N  TY ++I+ LCK G   + L+M+  M       +   Y S 
Sbjct: 62  RAVELHRRMLSEIC-SGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           I+GLC+ G +  A  ++ EMV  GI  + +TYN++I   CR G  KE    +  M  +G 
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           L +VV++  LI  L + GKV EA  I+EL+ ++    +  T+  L+NGLC +  ++ A++
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                             L   M + G K++  + N+L+NG+  + K E A+ LF++M  
Sbjct: 241 ------------------LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQY 282

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +  +P++ +Y  L+  L +  R   A      M   G  P + TY++L++GLC++  I+ 
Sbjct: 283 EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+ +        + P + +Y+ILI G+  A + E A++++  +     VPN+VTYN +++
Sbjct: 343 AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMIN 402

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G   +A  ++  + E     D IS+N  ++G    +++  A EFL     +   P
Sbjct: 403 GLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSP 462

Query: 607 TTITWHILVRAVMNNGAST 625
                 +LV     +  S+
Sbjct: 463 NDSVTLMLVNLYAADAQSS 481



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 234/442 (52%), Gaps = 28/442 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRM-NEI-------FGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +I A  K     +A+++ +RM +EI       +G     LC+     K  +    +   G
Sbjct: 50  LINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG 109

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+V  Y ++INGL + G L  A+ +FDEM  +G++ NV+ YN LI    + G +  A 
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
             + ++V E  + P+VVT+  +I+ L K G+  E  ++++ M K     +  TY S ++G
Sbjct: 170 RTFSQMVGE-GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNG 228

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
           LC    ++ A R++  MVE GI +D ++YN +I+G+C +GK +E   L+  M  +    +
Sbjct: 229 LCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPS 288

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           + +Y IL++ L +NG++  A  ++  ++    +    T+ VL++GLCKNG + +AI +  
Sbjct: 289 ITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFR 348

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
            ++                  K+   +  Y+   L+ G  QA + E+A+ +F E+   G 
Sbjct: 349 SLKS----------------IKYKPSIRIYSI--LIGGMFQARRWESAMEIFDEIPTVGL 390

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P +V+YN +INGLCK  +  EA     +M E G + D I+++ +I G  Q  ++  A++
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAME 450

Query: 490 LCCQFLQKGFTPDVTMYNILIH 511
              +  +K F+P+ ++  +L++
Sbjct: 451 FLKRMREKNFSPNDSVTLMLVN 472



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 224/426 (52%), Gaps = 19/426 (4%)

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           M++   PN+VT + ++ G+C  G+  + LE++D+M ++  + D   Y   I+ L K    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNIL 316
             A  ++R M+      +  TY  +ID  C+ G   +  +++  M   G C NV+ Y+ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I GL   GK+ EA+++++ +  +   A+  T+  LI+  C+ G   +A +  +++   GE
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV--GE 178

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G L D                  T  +L++   +  K++ A  +F+ M ++G +P +V+Y
Sbjct: 179 GILPDVV----------------TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTY 222

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N+L+NGLC   +   A    + M+E+G K D+I+Y+ LING C S K + A+ L  +   
Sbjct: 223 NSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQY 282

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
           +  TP +T Y IL+  L   G++  A +L++NM+     P+L TY  L+DGL K G  ++
Sbjct: 283 EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A++++  +   + +P I  Y+I + G+    R   A E  ++    G++P  +T++I++ 
Sbjct: 343 AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMIN 402

Query: 617 AVMNNG 622
            +   G
Sbjct: 403 GLCKEG 408


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/596 (28%), Positives = 282/596 (47%), Gaps = 47/596 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           V + + + +L+  +K+   AL  F  A+  P + H+   +  ++ +L   +    V  +L
Sbjct: 91  VPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVL 150

Query: 62  ELIEIQKCYCP-EDVALSVIQAYGKNSMPD---KALDVFQRMNE-----IFGCEAGILCR 112
           + +       P E + +++++  G+  M     K LD+  +  E     IF     +L +
Sbjct: 151 DEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK 210

Query: 113 K-----RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           +     R+F + K  +N     G+  D Y++G ++ GL  +  +  A  +   M  RG  
Sbjct: 211 EDIDLAREFYRKKMMMN-----GVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKT 265

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N V YN +I    K G   RA     R +M   V P+ VT+NV+I+  C+     + L 
Sbjct: 266 PNTVIYNTMIHALCKNGKVGRA-----RSLMNEMVEPSDVTFNVLISAYCQEENLVQALV 320

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNV-EGAERVYREMVES-GIFVDAVTYNAMIDG 285
           + ++        D  T    +  LCKAG V EG E + R  VES G  VD V YN +I G
Sbjct: 321 LLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER--VESMGGVVDVVAYNTLIKG 378

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC  GK K    + + M  KGCL NV +YNIL  G  ++G +D AI ++  ++    N +
Sbjct: 379 FCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWN 438

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LI GLC  G +    +IL  +EE   G               G +++ Y  NS+
Sbjct: 439 FMTYDTLIRGLCSGGRMEDGFKILELMEESRGG--------------AGGRISPY--NSI 482

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G  + ++ E A+    +M +    P  V  +  I G C     G+A     +M+++G 
Sbjct: 483 IYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGG 540

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P ++ Y  LI+G CQ   +  A +L  + +  G+ P    +N LI   C  GKV  AL+
Sbjct: 541 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALK 600

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           L  +M  R C+P++ +Y+ ++D L   GD  KA+ ++  ++E+ + PD  ++N  L
Sbjct: 601 LMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 241/517 (46%), Gaps = 29/517 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           LC  R+FE  K  L+ +    G  PD   + T++ GL ++  +   + V D + + G   
Sbjct: 137 LCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENP 196

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++  +N ++D   K+ D   A+E + + +M   V  +  T+ +++ GLC   R  +  ++
Sbjct: 197 SLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKL 255

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              MK   +  ++  Y + IH LCK G V  A  +  EMVE       VT+N +I  +C+
Sbjct: 256 LQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEP----SDVTFNVLISAYCQ 311

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
              + +   L E     G + +VV+   ++  L + G+V E + + E +       D   
Sbjct: 312 EENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVA 371

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LI G C  G      ++L +                  M+  GC  N  T N L +G
Sbjct: 372 YNTLIKGFCMLGKAKVGHRVLKD------------------MEIKGCLPNVDTYNILASG 413

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK--GWK 465
           +  +  L++AI LF +M   G +   ++Y+TLI GLC   R  + +  ++ M E   G  
Sbjct: 414 YCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAG 473

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
             +  Y+ +I GL +  + + AL+   + ++K F P     ++ I G C+ G + DA ++
Sbjct: 474 GRISPYNSIIYGLYKKNQFEEALEFLTK-MEKLF-PRAVDRSLRILGFCNEGSIGDAKRV 531

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           Y  M K   VP+++ Y  L+ G  + G+  +A E+ N +++    P   ++N  +   C 
Sbjct: 532 YDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCG 591

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             ++  A + + D + RG LP   ++  +V A+ N G
Sbjct: 592 QGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKG 628



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 167/359 (46%), Gaps = 30/359 (8%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           TY + IH LC     E  + V  EM  S G   D   +  ++ G  RA  +++  ++ ++
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 302 MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK----NCNADSTTHGVLINGLCK 357
           + + G    +     I  +L    +D A    E  R+K      + D  T G+L+ GLC 
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKEDIDLA---REFYRKKMMMNGVSGDDYTFGILMKGLCL 245

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               R+ DA  L+  M   G   N    N++++   +  K+  A
Sbjct: 246 TN------------------RIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRA 287

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM      P+ V++N LI+  C+ E   +A   +++    G+ PD++T + ++  
Sbjct: 288 RSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 343

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC++ ++   +++  +    G   DV  YN LI G C  GK +   ++  +M+ + C+PN
Sbjct: 344 LCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN 403

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           + TYN L  G   +G  D A++++N +  + +  + ++Y+  ++GLCS  RM D F+ L
Sbjct: 404 VDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKIL 462


>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
          Length = 1012

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 179/700 (25%), Positives = 313/700 (44%), Gaps = 97/700 (13%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED-- 74
           +P   L +     R  G   S   F  ++ R ++   + +   +LE++  +    P D  
Sbjct: 154 DPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNF 213

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNS 125
           V  +VI  + K   P+ AL  F+   +          +      LC+  + ++ +  +  
Sbjct: 214 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 273

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L ++G + D   Y   I+G  K G L+ AL    EM E+G+  +VV Y+ILIDG  K+G+
Sbjct: 274 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 333

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A  +  +++ E  V PN++TY  +I GLCK G+ +E   +++R+     E D F Y 
Sbjct: 334 VEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 392

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-------- 297
           + I G+C+ GN+  A  +  +M + GI    +TYN +I+G C AG++ E  E        
Sbjct: 393 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD 452

Query: 298 -------------------LWEVMGR----KGCLNVVSYNILIRGLLENGKVDEAISIWE 334
                              + E+  R    K  +++V  NIL++  L  G   EA +++ 
Sbjct: 453 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 512

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGR 378
            + E +   D+ T+  +I G CK G + +A+++ NE+ +                  +G 
Sbjct: 513 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGM 572

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMN------------GFI----------------- 409
           L  A  ++  + + G  L+ +T  +L++            G +                 
Sbjct: 573 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 632

Query: 410 ------QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
                 +    E AI ++  M RKG + T  S  T++  L    R  +AY  V    E  
Sbjct: 633 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETT 690

Query: 464 WKP-DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
               D+I Y+++INGLC+   +  AL LC     +G T +   YN LI+GLC  G + +A
Sbjct: 691 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 750

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L+L+ +++    VP+ VTY  L+D L K G    A ++ + ++ + L P+II YN  + G
Sbjct: 751 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 810

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            C   +  DA   ++  +   + P   T   +++     G
Sbjct: 811 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG 850



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 242/577 (41%), Gaps = 92/577 (15%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++   E+A   L  + ++G++P++ +Y  +I GL K G L  A  +F+ +   G+E +
Sbjct: 328 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 387

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y  LIDG  +KG+  RA  +   +  +  + P+++TYN +INGLC  GR  E  E+ 
Sbjct: 388 EFLYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCMAGRVSEADEVS 446

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEG------------------------------ 259
             +       D  TY + +    K  N++                               
Sbjct: 447 KGVVG-----DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLM 501

Query: 260 -----AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
                A+ +YR M E  +  D  TY  MI G+C+ G+I+E  E++  + +      V YN
Sbjct: 502 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYN 561

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTT-----HGVLING--------------- 354
            +I  L + G +D A  +   L EK    D  T     H +  NG               
Sbjct: 562 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQL 621

Query: 355 ---------------LCKNGYLNKAIQILNEVEEGG---------------EGRLADAAS 384
                          LCK G    AI++   +   G                 R  DA  
Sbjct: 622 NSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYL 681

Query: 385 LV-NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           LV N  +     ++      ++NG  +   L  A+ L      +G +   ++YN+LINGL
Sbjct: 682 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 741

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+     EA      +   G  P  +TY +LI+ LC+      A KL    + KG  P++
Sbjct: 742 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 801

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN ++ G C  G+ EDA+++ S        P+  T ++++ G  K GD ++AL ++  
Sbjct: 802 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 861

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
             ++ +  D   +   +KG C+  RM +A   L + L
Sbjct: 862 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 898



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 249/559 (44%), Gaps = 64/559 (11%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L SL + G  P + S    +  L +       L  + ++  + +  N   Y+I+   F  
Sbjct: 55  LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 114

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMING--------------------------- 215
              Y  A++     + + S++P     + +I+G                           
Sbjct: 115 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPS 174

Query: 216 -LCKC---------GRFDECLEMWDRM--KKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
            L  C         G  D  +E+ + M  K      D+F   + I G CK G  E A   
Sbjct: 175 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 234

Query: 264 YREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +   V+SG+ V + VTY  ++   C+ GK+ E  +L   +  +G   + V Y+  I G  
Sbjct: 235 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 294

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGE---- 376
           + G + +A+     + EK  N D  ++ +LI+GL K G + +A+ +L + ++EG E    
Sbjct: 295 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 354

Query: 377 ------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                       G+L +A  L NR+   G +++ +   +L++G  +   L  A  +  +M
Sbjct: 355 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 414

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            ++G  P++++YNT+INGLC   R  EA     + + KG   D+ITYS L++   + + I
Sbjct: 415 EQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNI 469

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D  L++  +FL+     D+ M NIL+      G   +A  LY  M + +  P+  TY T+
Sbjct: 470 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 529

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G  KTG  ++ALE++N + +  +    + YN  +  LC    +  A E L +   +G+
Sbjct: 530 IKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 588

Query: 605 LPTTITWHILVRAVMNNGA 623
                T   L+ ++  NG 
Sbjct: 589 YLDIHTSRTLLHSIHANGG 607



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 137/599 (22%), Positives = 249/599 (41%), Gaps = 98/599 (16%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           L D  ++E     +  L   +++  ++P L+ + + I  L ++ K      V  + I + 
Sbjct: 324 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE-EAFVLFNRILSV 382

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           G        +D F  +  I G     +CRK    +A   L  + ++G++P + +Y TVIN
Sbjct: 383 GIE------VDEFLYVTLIDG-----ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 431

Query: 144 GL------------------------------VKSGDLLGALAVFDEMFERGVETNVVCY 173
           GL                              +K  ++   L +     E  +  ++V  
Sbjct: 432 GLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 491

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           NIL+  F   G Y  A  ++ R + E  + P+  TY  MI G CK G+ +E LEM++ ++
Sbjct: 492 NILLKAFLLMGAYGEADALY-RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 550

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG-------- 285
           K+     +  Y   I  LCK G ++ A  V  E+ E G+++D  T   ++          
Sbjct: 551 KSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 609

Query: 286 ---------------------------FCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
                                       C+ G  +   E++ +M RKG L V   + +++
Sbjct: 610 GILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKG-LTVTFPSTILK 668

Query: 319 GLLENGK-VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            L++N + +D  + +         + D   + ++INGLCK G+L KA+ + +  +  G  
Sbjct: 669 TLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 728

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          +G L +A  L + ++  G   +  T   L++   +     +A  L
Sbjct: 729 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 788

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
              M  KG  P ++ YN++++G CK+ +  +A   V   +     PD  T S +I G C+
Sbjct: 789 LDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK 848

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
              ++ AL +  +F  K  + D   +  LI G C+ G++E+A  L   M     V  L+
Sbjct: 849 KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 907



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            C+  Q E A R ++      + PD ++  ++I G  K GD+  AL+VF E  ++ +  + 
Sbjct: 812  CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 871

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV------VTYNVMING----LCKCG 220
              +  LI GF  KG    A+ +   +++  SV   +      +  +  I G    LC+ G
Sbjct: 872  FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQG 931

Query: 221  RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV-DAVTY 279
            R  + +++ D       E  S  Y S    L     ++    V  E ++   +V D  + 
Sbjct: 932  RVPQAIKILD-------EISSTIYPSG-KNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSL 983

Query: 280  NAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            ++ +   C +GK+++  E   VM    C+
Sbjct: 984  HSTVSSLCTSGKLEQANEF--VMSVLSCM 1010


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 232/466 (49%), Gaps = 22/466 (4%)

Query: 154  ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVM 212
            A+ VF E  E GV  NV  YNI+I    + G    A  +   L+ME   Y P+V++Y+ +
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHL--LLLMELKGYTPDVISYSTV 710

Query: 213  INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
            ING C+ G  D+  ++ ++MK+   + +S+TY S I  LC+   +  AE  + EM+  GI
Sbjct: 711  INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770

Query: 273  FVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAIS 331
              D + Y  ++DGFC+ G I+   +  +E+  R    +V++Y  +I G  + G + EA  
Sbjct: 771  LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830

Query: 332  IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
            ++  +  +    D  T   L+NG CK G++                   DA  + N M +
Sbjct: 831  LFHEMLCRGLEPDIITFTELMNGYCKAGHIK------------------DAFRVHNHMIQ 872

Query: 392  HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             GC  N  T  +L++G  +   L++A  L  EM + G  P + +YN+++NGLCK     E
Sbjct: 873  AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            A   V E    G   D +TY+ L++  C+S ++D A ++  + L KG  P +  +N+L++
Sbjct: 933  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            G C  G +ED  +L + M  +   PN  T+N L+       +   A  I+  +    + P
Sbjct: 993  GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052

Query: 572  DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            D  +Y   +KG C+   M +A+    +   +G   +  T+ +L++ 
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 233/466 (50%), Gaps = 25/466 (5%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            CR  + +K  + +  + +KGLKP+ Y+YG++I  L +   L  A   F EM  +G+  + 
Sbjct: 715  CRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
            + Y  L+DGF K+GD   A + +  +     + P+V+TY  +I+G C+ G   E  +++ 
Sbjct: 775  IVYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             M     E D  T+   ++G CKAG+++ A RV+  M+++G   + VTY  +IDG C+ G
Sbjct: 834  EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893

Query: 291  KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
             +    EL   M + G   N+ +YN ++ GL ++G ++EA+ +         NAD+ T+ 
Sbjct: 894  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             L++  CK+G ++KA +IL E                  M   G +    T N LMNGF 
Sbjct: 954  TLMDAYCKSGEMDKAQEILTE------------------MLGKGLQPTIVTFNVLMNGFC 995

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
                LE+   L   M  KG +P   ++N L+   C       A +  K+M  +G +PD  
Sbjct: 996  LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055

Query: 470  TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            TY  L+ G C ++ +  A  L  +   KGF+  V+ Y++LI G     K  +A +++  M
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALE-----IWNHILEERLR 570
            ++     +   ++   D  +K    D  ++     I N++++E+LR
Sbjct: 1116 RRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 1161



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 236/492 (47%), Gaps = 21/492 (4%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G  P V+        LV+ G L  A  VF++M   G+  +V   N+ +    K  +    
Sbjct: 595  GSDPRVFD--VFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
              I  R   E  V  NV +YN++I+ +C+ GR +E   +   M+      D  +Y + I+
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            G C+ G ++   ++  +M + G+  ++ TY ++I   CR  K+ E  E +  M  +G L 
Sbjct: 713  GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 309  NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            + + Y  L+ G  + G +  A   +  +  ++   D  T+  +I+G C         QI 
Sbjct: 773  DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC---------QI- 822

Query: 369  NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    G + +A  L + M   G + +  T   LMNG+ +A  +++A  +   M + G
Sbjct: 823  --------GDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            CSP VV+Y TLI+GLCK      A   + EM + G +P++ TY+ ++NGLC+S  I+ A+
Sbjct: 875  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 489  KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            KL  +F   G   D   Y  L+   C +G+++ A ++ + M  +   P +VT+N LM+G 
Sbjct: 935  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994

Query: 549  FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
               G  +   ++ N +L + + P+  ++N  +K  C  + +  A     D   RG+ P  
Sbjct: 995  CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054

Query: 609  ITWHILVRAVMN 620
             T+  LV+   N
Sbjct: 1055 KTYENLVKGHCN 1066



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 242/502 (48%), Gaps = 48/502 (9%)

Query: 141  VINGLVKSGDLLGALAVFDEMFERG----VETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            VI+  V S DL  A ++    +ER      E+ V  +++L+  +   G   R  +++ ++
Sbjct: 548  VIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQV 607

Query: 197  VMETSVYPNV-VTYNVMIN-GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            ++E  + P     +  M+N GL      D C     R+ K+                   
Sbjct: 608  LVEFGMLPEARKVFEKMLNYGLVLS--VDSCNVYLARLSKD------------------C 647

Query: 255  GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSY 313
                 A  V+RE  E G+  +  +YN +I   C+ G+I E   L  +M  KG   +V+SY
Sbjct: 648  NKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISY 707

Query: 314  NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            + +I G    G++D+   + E +++K    +S T+G +I  LC+   L +A +  +E+  
Sbjct: 708  STVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI- 766

Query: 374  GGEGRLAD-------------------AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
             G+G L D                   A+     M       +  T  ++++GF Q   +
Sbjct: 767  -GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825

Query: 415  ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
              A  LF EM  +G  P ++++  L+NG CK     +A+     M++ G  P+++TY+ L
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTL 885

Query: 475  INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
            I+GLC+   +D A +L  +  + G  P++  YN +++GLC +G +E+A++L    +    
Sbjct: 886  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945

Query: 535  VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
              + VTY TLMD   K+G+ DKA EI   +L + L+P I+++N+ + G C    + D  +
Sbjct: 946  NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005

Query: 595  FLNDALCRGILPTTITWHILVR 616
             LN  L +GI P   T++ LV+
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVK 1027



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 224/463 (48%), Gaps = 34/463 (7%)

Query: 59   RILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGI 109
             +L L+E+ K Y P+ ++ S VI  Y +    DK   + ++M +         +G   G+
Sbjct: 690  HLLLLMEL-KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGL 748

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LCR  +  +A+   + +  +G+ PD   Y T+++G  K GD+  A   F EM  R +  +
Sbjct: 749  LCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPD 808

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V+ Y  +I GF + GD + A +++  ++    + P+++T+  ++NG CK G   +   + 
Sbjct: 809  VLTYTAIISGFCQIGDMVEAGKLFHEMLCR-GLEPDIITFTELMNGYCKAGHIKDAFRVH 867

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            + M +     +  TY + I GLCK G+++ A  +  EM + G+  +  TYN++++G C++
Sbjct: 868  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 290  GKIKECFEL---WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            G I+E  +L   +E  G     + V+Y  L+    ++G++D+A  I   +  K       
Sbjct: 928  GNIEEAVKLVGEFEAAGLNA--DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            T  VL+NG C +G L                   D   L+N M   G   NA T N L+ 
Sbjct: 986  TFNVLMNGFCLHGMLE------------------DGEKLLNWMLAKGIAPNATTFNCLVK 1027

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
             +   + L+ A  ++K+M  +G  P   +Y  L+ G C      EA+   +EM  KG+  
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087

Query: 467  DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             + TYS+LI G  + KK   A ++  Q  + G   D  +++  
Sbjct: 1088 SVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFF 1130



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 193/385 (50%), Gaps = 20/385 (5%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR-AGKIKECFEL 298
           D   +  F   L + G +  A +V+ +M+  G+ +   + N  +    +   K      +
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 299 WEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +      G C NV SYNI+I  + + G+++EA  +  L+  K    D  ++  +ING C+
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
            G L+K  +                  L+ +M + G K N+YT  S++    +  KL  A
Sbjct: 717 FGELDKVWK------------------LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEA 758

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
              F EM  +G  P  + Y TL++G CK      A  F  EM  +   PD++TY+ +I+G
Sbjct: 759 EEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 818

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            CQ   +  A KL  + L +G  PD+  +  L++G C AG ++DA +++++M +  C PN
Sbjct: 819 FCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +VTY TL+DGL K GD D A E+ + + +  L+P+I +YN  + GLC    + +A + + 
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           +    G+   T+T+  L+ A   +G
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSG 963


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 268/566 (47%), Gaps = 51/566 (9%)

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
            D+   V+QA+   ++P   LD++     + G      C + +F+KA+  L  + ++G+ 
Sbjct: 284 SDLGYQVLQAWKGANIP---LDMYAYTVAVRG-----FCNELKFDKAESVLRDMEKEGMV 335

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD++ Y  +I    K+G+LL A A  +EM  +GV+ N V    ++    + G +    + 
Sbjct: 336 PDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQ 395

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           + +      ++ + V+YN +++ LCK G+ +E + + D MK  +   D   Y + I+G C
Sbjct: 396 FNQF-KSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYC 454

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVV 311
             GNV  A +V+ EM E+GI +D VTY+ ++ GFCR G   E   L + M  +K   N +
Sbjct: 455 CQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSI 514

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           +YN+++  L   GKV EA +++  + +K+ +     +  +ING CK  +           
Sbjct: 515 TYNVVVESLCMGGKVKEAEAVFNSIEDKSLD----NYFAMINGYCKANHT---------- 560

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                   A AA L  R+   G  +    C +L+    +    +  + L + M      P
Sbjct: 561 --------AGAAKLFFRLSVKG-HVKRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVEP 611

Query: 432 TVVSYNTLINGLCKV---ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           +   Y  L   LC+        +A S    +L++GW PD+I Y+++I   C+   +  A+
Sbjct: 612 SKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAV 671

Query: 489 KLCCQFLQKGFTPDVTMYNILIHG--------LCSAGKVE-------DALQLYSNMKKRN 533
            L     Q+G  PD+  + +L+ G        + SA   +       DAL +++ MK   
Sbjct: 672 DLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTE 731

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P+++ Y  L+DG  K      A+ +++ ++E  L PDII+Y   L G C    +  A 
Sbjct: 732 IKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAV 791

Query: 594 EFLNDALCRGILPTTITWHILVRAVM 619
             L+    +GI P T T   L+  ++
Sbjct: 792 NLLDQMSLKGISPDTRTMSALLHGIL 817



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/627 (25%), Positives = 267/627 (42%), Gaps = 91/627 (14%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN------EIFGCE--AGILCRKRQFEKAKRFLNSLWEK 129
           ++++AY    M D A+DV  +M        IF C      L +  + + A      L   
Sbjct: 168 ALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRL 227

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF--KKGDY- 186
           GL P+ Y+Y  VI  L  +G L  A+ V  EM E G+      Y   I+G    +  D  
Sbjct: 228 GLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLG 287

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            +  + W+   +   +Y     Y V + G C   +FD+   +   M+K     D   Y +
Sbjct: 288 YQVLQAWKGANIPLDMY----AYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTA 343

Query: 247 FIHGLCKAGNVEGAERVYREMVESGI---------------------------------- 272
            I   CKAGN+  A     EM+  G+                                  
Sbjct: 344 LICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLG 403

Query: 273 -FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
            F+D V+YN ++D  C+ GK++E   L + M  K   ++V+ Y  LI G    G V +A 
Sbjct: 404 LFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAF 463

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
            ++E +RE     D  T+ VL++G C+NG   +A+ +L+ ++                  
Sbjct: 464 KVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESL 523

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G++ +A ++ N ++     L+ Y   +++NG+ +A+    A  LF  +S KG     
Sbjct: 524 CMGGKVKEAEAVFNSIEDKS--LDNYF--AMINGYCKANHTAGAAKLFFRLSVKGHVKRS 579

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ---SKKIDMALKL 490
             YN L N LC+          ++ ML    +P    Y  L   LC+   +  +  A  +
Sbjct: 580 CCYNLLKN-LCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSV 638

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               L++G+TPD+  Y I+I   C    +++A+ L+ +MK+R   P+LVT+  L+DG  K
Sbjct: 639 FDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHK 698

Query: 551 TG---------------DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
                            D   AL IW  + +  ++PD+I Y + + G C    + DA   
Sbjct: 699 AHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGV 758

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
            ++ + RG+ P  IT+  L+      G
Sbjct: 759 FDEMIERGLEPDIITYTALLSGCCQRG 785



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 55/533 (10%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           K Q   A  F N L + G K D+ +Y  +I  L   G      ++F ++       N   
Sbjct: 77  KNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTP 136

Query: 173 YNI------LIDGFF---KKGDYMRAKEIWERLVM-------------------ETSVYP 204
           + I      L DGF     K   +   ++++ LV                         P
Sbjct: 137 FEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVP 196

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++   N ++N L K  + D  L ++ ++K+     + +TY   I  LC  G++E A  V 
Sbjct: 197 HIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVI 256

Query: 265 REMVESGIFVDAVTYNAMIDGFC---RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLL 321
           +EM ESGI      Y A I+G C    +    +  + W+  G    L++ +Y + +RG  
Sbjct: 257 KEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWK--GANIPLDMYAYTVAVRGFC 314

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
              K D+A S+   + ++    D   +  LI   CK G L KA   LNE           
Sbjct: 315 NELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNE----------- 363

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  M   G K+N     S+++   +       +  F +    G     VSYN +++
Sbjct: 364 -------MMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVD 416

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LCK+ +  EA + + EM  K    D++ Y+ LING C    +  A K+  +  + G   
Sbjct: 417 ALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEI 476

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV  Y++L+ G C  G   +AL L   M+ +   PN +TYN +++ L   G   +A  ++
Sbjct: 477 DVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVF 536

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           N I ++ L     +Y   + G C  +  + A +       +G +  +  +++L
Sbjct: 537 NSIEDKSLD----NYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLL 585



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 204/444 (45%), Gaps = 47/444 (10%)

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-----------ESGIFV 274
           L  ++++K +  + D  TY + I  LC  G  +    ++ +++           E   F+
Sbjct: 84  LSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISHFL 143

Query: 275 DAVT------------------YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           D ++                  Y+A++  +   G   +  ++   MGR+  + ++   N 
Sbjct: 144 DTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNF 203

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+  L++N K+D A+++++ L+    + +  T+ ++I  LC NG L +A+ ++ E+EE G
Sbjct: 204 LMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESG 263

Query: 376 EGRLADAASL------VNRMDKHGCK-----------LNAYTCNSLMNGFIQASKLENAI 418
                 A +       VN M   G +           L+ Y     + GF    K + A 
Sbjct: 264 ITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAE 323

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            + ++M ++G  P +  Y  LI   CK     +AY+F+ EM+ KG K + +    +++ L
Sbjct: 324 SVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCL 383

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+       +    QF   G   D   YN ++  LC  GK+E+A+ L   MK +    ++
Sbjct: 384 CELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDV 443

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + Y TL++G    G+   A +++  + E  +  D+++Y++ + G C     ++A   L+ 
Sbjct: 444 MHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDY 503

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
              + + P +IT++++V ++   G
Sbjct: 504 MQTQKLKPNSITYNVVVESLCMGG 527


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 264/535 (49%), Gaps = 40/535 (7%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  + + G   D Y+   V+       +   AL VF+E+ +RG     V ++IL+  F K
Sbjct: 89  LKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSK 147

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G   +A E+ E +  E +V  N  T+  +I G  K  R D+ L ++D+MKK+    D  
Sbjct: 148 WGKVDKACELIETM-EEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 206

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF--ELWE 300
            Y   I GLC   +V+ A  +Y EM    I  D      +I  F +  ++  CF  E+ E
Sbjct: 207 LYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELT-CFFEEMHE 265

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD---------------- 344
            M  K   + + YN ++  L++NG V +A  + + +   NC  D                
Sbjct: 266 DMDPKA--STLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPN 323

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVN 387
           STT  ++INGL K G L+ A+ +  ++   G                   RL ++  L+ 
Sbjct: 324 STTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQ 383

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
            M++ G +  ++T N +     +   +  A+ L K+M   G  P +    +L+  LCK  
Sbjct: 384 EMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHG 443

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  EA  F+ +M E+G++PD++ YS  ++GL + +++D ALKL      +G+ PDV  YN
Sbjct: 444 KEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYN 503

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILI GLC   ++ +A  L   M+++  VP+ VTYNTL+DGL KT   ++A+   + ++E+
Sbjct: 504 ILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEK 563

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              P++I+Y+  + GLC+  R  DA    N+   +G  P++I +   +  + N G
Sbjct: 564 EREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCG 618



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 276/570 (48%), Gaps = 46/570 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE-------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           V+Q Y   +  DKALDVF  +++       +F        +  + +KA   + ++ EK +
Sbjct: 107 VLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNV 166

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           + +  ++ ++I G VK   +  AL +FD+M + G   ++  Y+++I G     D  +A  
Sbjct: 167 RLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALC 226

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS-FTYCSFIHG 250
           ++  +     + P+V     +I+   K    +E    ++ M ++   K S   Y S ++ 
Sbjct: 227 LYSEM-KGFKIQPDVKIVTKLISSFSK---EEELTCFFEEMHEDMDPKASTLLYNSVLNS 282

Query: 251 LCKAGNVEGAERVYREMV----------------ESGIFVDAVTYNAMIDGFCRAGKIKE 294
           L   G+V  A  + + +                 ++ +  ++ T++ +I+G  + G +  
Sbjct: 283 LVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDL 342

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L+  M R GC  +++ YN LI GL  + ++ E+  + + + E      S T+  +  
Sbjct: 343 AVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFG 402

Query: 354 GLCKNGYLNKAIQILNEVE-EGGEGRLADAASLVNRMDKHG-----CKL----------- 396
            LC+   ++ A+ +L ++   G    +  + SLV  + KHG     CK            
Sbjct: 403 CLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQP 462

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +    ++ ++G I+  +++ A+ LF+++  +G  P V++YN LI GLCK +R  EA + +
Sbjct: 463 DIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLL 522

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
            EM EKG  P  +TY+ LI+GLC++  ++ A+      ++K   P+V  Y+ LI+GLC+A
Sbjct: 523 HEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNA 582

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G+ +DAL L++ M ++ C P+ + Y   + GL   G  ++AL     + E  ++PD   Y
Sbjct: 583 GRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVY 642

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILP 606
              L      S    AFE L + + +G  P
Sbjct: 643 VGLLNAFLVDSNQPLAFEILQEMVDKGKFP 672



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 257/558 (46%), Gaps = 48/558 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           S+I  + K S  DKAL +F +M +        ++    G LC  +  +KA    + +   
Sbjct: 175 SLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGF 234

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMR 188
            ++PDV     +I+   K  +L      F+EM E    + + + YN +++     G   +
Sbjct: 235 KIQPDVKIVTKLISSFSKEEELT---CFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHK 291

Query: 189 AKEIWERLVM---------------ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           A  + + + +               +  V PN  T++++INGL K G  D  + ++  M 
Sbjct: 292 AYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMA 351

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
           +   + D   Y + I GLC +  ++ +  + +EM ESGI   + T N +    CR   I 
Sbjct: 352 RIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDIS 411

Query: 294 ECFELWEVMGRKGCLNVVSYNI-LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
               L + M   G +  + ++  L++ L ++GK  EA      + E+    D   +   +
Sbjct: 412 GALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACL 471

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GL K   +++A+++  ++    +G   D                AY  N L+ G  +  
Sbjct: 472 DGLIKIQEVDQALKLFQDI--CAQGYCPDVI--------------AY--NILIKGLCKTQ 513

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           ++  A  L  EM  KG  P+ V+YNTLI+GLCK +   EA  F+  M+EK  +P++ITYS
Sbjct: 514 RIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYS 573

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LINGLC + + D AL L  +  +KG TP    Y   IHGL + G+  +AL     M++R
Sbjct: 574 TLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEER 633

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN-ITLK-GLCSCSRMS 590
              P+   Y  L++      +   A EI   ++++   PD+   N I+++  +   S  +
Sbjct: 634 EMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSEDA 693

Query: 591 DAFEFLNDALCRGILPTT 608
                + + L +G +P+ 
Sbjct: 694 RTSSSIKNLLAKGSIPSA 711



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/477 (21%), Positives = 202/477 (42%), Gaps = 101/477 (21%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +S++Y   +  L K+  ++  E   +EM + G   D  T   ++  +C   +  +  +++
Sbjct: 65  NSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVF 124

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
             +  +G ++   ++IL+    + GKVD+A  + E + EKN   +  T   LI G  K  
Sbjct: 125 NEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKES 184

Query: 360 YLNKAIQILNEVEEGG-------------------------------EG-RLADAASLVN 387
            ++KA+ + +++++ G                               +G ++     +V 
Sbjct: 185 RVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVT 244

Query: 388 RMDKHGCKLNAYTC------------------NSLMNGFIQASKLENAIFLFKEMSRKGC 429
           ++     K    TC                  NS++N  +    +  A  L + ++   C
Sbjct: 245 KLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNC 304

Query: 430 ----------------SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
                            P   +++ +INGL K      A    ++M   G KPD++ Y+ 
Sbjct: 305 IGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNN 364

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTP----------------DVT-----MYNILIHG 512
           LI+GLC S ++  +  L  +  + G  P                D++     +  + IHG
Sbjct: 365 LIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHG 424

Query: 513 --------------LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
                         LC  GK  +A +   +M +    P++V Y+  +DGL K  + D+AL
Sbjct: 425 HVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQAL 484

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++  I  +   PD+I+YNI +KGLC   R+++A   L++   +G++P+ +T++ L+
Sbjct: 485 KLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLI 541



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 120/253 (47%), Gaps = 8/253 (3%)

Query: 374 GGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
           G  G + +A  L +++ K G C  N+Y+   L+    ++  ++      KEM   G    
Sbjct: 41  GNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFD 100

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
             +   ++   C +  F +A     E+ ++GW  D   +S+L+    +  K+D A +L  
Sbjct: 101 KYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIE 159

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
              +K    +   +  LI+G     +V+ AL L+  MKK    P++  Y+ ++ GL    
Sbjct: 160 TMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNK 219

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP--TTIT 610
           D  KAL +++ +   +++PD+    I  K + S S+  +   F  + +   + P  +T+ 
Sbjct: 220 DVKKALCLYSEMKGFKIQPDV---KIVTKLISSFSKEEELTCFFEE-MHEDMDPKASTLL 275

Query: 611 WHILVRAVMNNGA 623
           ++ ++ ++++NG+
Sbjct: 276 YNSVLNSLVDNGS 288


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/625 (27%), Positives = 287/625 (45%), Gaps = 56/625 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +  +++  +L+ + +   AL  F  A R+  Y H P +++ +L  L   KL     R+L 
Sbjct: 99  LKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLR 158

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
           L+  ++                            +R  E FG       R  +   A R 
Sbjct: 159 LMAKRR---------------------------IERRPEAFGYVMVSYSRAGKLRNAMRV 191

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  + + G++PD+    T I+ LV    L  A+   + M    +E NV+ YN LI G+  
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYC- 250

Query: 183 KGDYMRAKEIWERLVMETSV---YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE- 238
             D  R ++  E L+ E       P+ ++Y  ++  LCK  R  E   + ++M K+    
Sbjct: 251 --DLHRLEDAME-LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLL 307

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  TY +F+H L K G+ + A    RE  E    VD V Y+A++  FCR G++ +  E+
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M  KGC+ +VV+Y  +I GL +  KVD+A  +   + +  C  ++ ++  L+NGLCK
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           NG   +A +++N  EE                       NA T + LM+GF +  K   A
Sbjct: 428 NGNSLEAREMMNMSEEDW------------------WIPNAITYSVLMHGFRREGKSSEA 469

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L +EM +KG  PT V  N LI  LC+ E+  EA  F+++ L  G   +++ ++ +I+G
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            CQ   ++ AL L          PDV  Y  +I  L   G++E+A +L   M +   +P 
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 589

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            VTY T++    + G  +  L++   +L    +    +YN  ++ LCS   +  A++ L 
Sbjct: 590 PVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLG 647

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
             L         T H+L+ + ++ G
Sbjct: 648 KVLRTASKIDANTCHMLIESYLSKG 672



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 1/249 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L +A  ++  M K G + +   CN+ ++  +  ++L+ A+   + M      P V++Y
Sbjct: 183 GKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITY 242

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LI G C + R  +A   + EM  KG  PD I+Y  ++  LC+ K+I     L  + L+
Sbjct: 243 NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 302

Query: 497 KG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                PD   YN  +H L   G  ++AL+     ++R    + V Y+ ++    + G  D
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 362

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KA EI N +  +   PD+++Y   + GLC   ++  A + L      G  P T+++  L+
Sbjct: 363 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 422

Query: 616 RAVMNNGAS 624
             +  NG S
Sbjct: 423 NGLCKNGNS 431


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 244/493 (49%), Gaps = 20/493 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVET 168
           LC+    + A+ F   +   G   D +   +++    +  DL  A  VF++M  E     
Sbjct: 181 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP 240

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V Y+ILI G  + G    A ++ + +V E    P+  TY V+I   C  G  D+ ++M
Sbjct: 241 NSVTYSILIHGLCEAGRLEEAFQLKQEMV-EKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M       +  TY   I  LC+ G +E A  V+R+M++ G+    +T+NA+I+G+C+
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G +   F+L  VM +  C  N+ +YN L+ GL    K  +A  +   + +     D  T
Sbjct: 360 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMD 390
           + +L++G CK G LN A  I N +   G                  GRL  A  ++  M 
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           K G  L+  T  +L++G  +  K ++  FLF+ M    C  T  ++N  ++ L K  +  
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA + + +M++ G  P ++T+++LI G C++ +  ++LK+  +  Q G +P+V  Y I+I
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC+ G+VE+A  +  +M      PN  TY  L+    K G  D+A +I + +++   +
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659

Query: 571 PDIISYNITLKGL 583
           P+   Y+  L G 
Sbjct: 660 PNSHIYSALLSGF 672



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 238/504 (47%), Gaps = 25/504 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + E G +     Y T++  L K      A  V+  M   G     + Y  +++   K
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 183 KGDYMRAKEIW--ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EK 239
            G +++A E++  + L +   +  +V T  V+ N  C+     E   ++++M K E    
Sbjct: 184 NG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEENCRP 240

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +S TY   IHGLC+AG +E A ++ +EMVE G      TY  +I   C  G   +  ++ 
Sbjct: 241 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 300

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M  K C+ NV +Y ILI  L   GK++EA  ++  + +        T   LING CK 
Sbjct: 301 DEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 360

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G++  A Q+L+ +E+G                   CK N  T N LM G  + SK   A 
Sbjct: 361 GWVVSAFQLLSVMEKGN------------------CKPNIRTYNELMEGLCRVSKSYKAF 402

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + +   G  P  V+YN L++G CK  +   A++    M   G +PD  T++ LI+GL
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 462

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  +++ A  +    ++KG + D   +  LI G C  GK +D   L+ NM +  C+   
Sbjct: 463 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 522

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            T+N  +D L K    ++A  +   +++  L P ++++ I ++G C     + + + L  
Sbjct: 523 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
               G  P   T+ I++  + NNG
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNG 606



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 254/556 (45%), Gaps = 34/556 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I+A     M DKA+ +   M     C   +         LCR+ + E+A      + + 
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P + ++  +ING  K G ++ A  +   M +   + N+  YN L++G  +     +A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  R+V +  + P+ VTYN++++G CK G+ +    +++ M     E D FT+ + I 
Sbjct: 402 FLLLRRVV-DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           GLCK G +E A  +   MV+ GI +D VT+ A+IDG C+ GK K+   L+E M    CL 
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 310 VV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
              ++N  +  L ++ K++EA ++   + +        TH +LI G C+           
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR----------- 569

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G  A +  ++ RM + GC  N YT   ++NG     ++E A  +   MS  G
Sbjct: 570 -------AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 622

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI--DM 486
            SP   +Y  L+    K  R   A+  V  M++ G +P+   YS L++G   S       
Sbjct: 623 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 682

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL        +  + +    N L   +     V+ AL++   +KK   VP    YN L+ 
Sbjct: 683 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVV 741

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G   +A ++   +++  L PD    +I ++  C   +  +  EF+   L    +P
Sbjct: 742 GLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVP 800

Query: 607 TTITWHILVRAVMNNG 622
           +  ++  ++  + N G
Sbjct: 801 SFASYCWVIHGLRNEG 816



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 137/359 (38%), Gaps = 55/359 (15%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F C    L +  +  +A   L  + + GL P V ++  +I G  ++G+   +L + + M 
Sbjct: 525 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G   NV  Y I+I+G    G    A+ I   +     V PN  TY V++    K GR 
Sbjct: 585 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM-SSFGVSPNHFTYAVLVKAHVKAGRL 643

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D   ++   M KN  + +S  Y + + G   +    GA    R +  +G        +  
Sbjct: 644 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA----RALSSTGDLDARSLSSEE 699

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
            D  C +  +   F L +                         VD A+ I + +  K C 
Sbjct: 700 NDNNCLSSHV---FRLMD-------------------------VDHALKIRDEI--KKCG 729

Query: 343 ADSTT-HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +   +  L+ GLCK G                  R+ +A  L   M KHG        
Sbjct: 730 VPTEDLYNFLVVGLCKEG------------------RIIEADQLTQDMVKHGL-FPDKAI 770

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           +S++  + +  K +N +   K +      P+  SY  +I+GL    R  EA   V +++
Sbjct: 771 SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 202/375 (53%), Gaps = 22/375 (5%)

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + + G C AG ++ A R+  EM    +  DA TYN +I G C  G+      + + 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M R+ C+ +VV+Y IL+    +     +A+ + + +R+K C  D  T+ V++NG+C+   
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ--- 114

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EGR+ DA   +  +  +GC+ N  + N ++ G   A + E+A  L
Sbjct: 115 ---------------EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
             EM +KGC P VV++N LI+ LC+      A   ++++ + G  P+ ++Y+ L++  C+
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            KK+D A+      + +G  PD+  YN L+  LC +G+V+ A++L   +K + C P L++
Sbjct: 220 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 279

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YNT++DGL K G   +ALE+ N ++ + L+PDII+Y+    GLC   R+ DA        
Sbjct: 280 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 339

Query: 601 CRGILPTTITWHILV 615
             GI P T+ ++ ++
Sbjct: 340 DMGIRPNTVLYNAII 354



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 224/423 (52%), Gaps = 23/423 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   Q + A+R +    E  ++PD Y+Y T+I GL   G    ALAV DEM  R    +V
Sbjct: 11  CGAGQLDAARRLV---AEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDV 67

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y IL++   K+  Y +A ++ + +  +    P++VTYNV++NG+C+ GR D+ +E   
Sbjct: 68  VTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK 126

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +     E ++ +Y   + GLC A   E AE +  EM + G   + VT+N +I   CR G
Sbjct: 127 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 186

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++   E+ E + + GC  N +SYN L+    +  K+D+A++  +L+  + C  D  ++ 
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 246

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L+  LC++G ++ A+++L+++++                   GC     + N++++G  
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKD------------------KGCAPVLISYNTVIDGLT 288

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A K + A+ L  EM  KG  P +++Y+T+  GLC+ +R  +A     ++ + G +P+ +
Sbjct: 289 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 348

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ +I GLC+ ++   A+ L    +  G  P+ + Y ILI GL   G +++A  L   +
Sbjct: 349 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408

Query: 530 KKR 532
             R
Sbjct: 409 CSR 411



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 221/430 (51%), Gaps = 24/430 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN ++ G+   G    A+    RLV E  V P+  TYN +I GLC  GR    L + D M
Sbjct: 3   YNAMVAGYCGAGQLDAAR----RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +     D  TY   +   CK    + A ++  EM + G   D VTYN +++G C+ G++
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            +  E  + +   GC  N VSYNI+++GL    + ++A  +   + +K C  +  T  +L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+ LC+ G +  A+++L ++                   K+GC  N+ + N L++ F + 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIP------------------KYGCTPNSLSYNPLLHAFCKQ 220

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K++ A+     M  +GC P +VSYNTL+  LC+      A   + ++ +KG  P +I+Y
Sbjct: 221 KKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 280

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + +I+GL ++ K   AL+L  + + KG  PD+  Y+ +  GLC   ++EDA++ +  ++ 
Sbjct: 281 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 340

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               PN V YN ++ GL K  +   A++++ +++     P+  +Y I ++GL     + +
Sbjct: 341 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 400

Query: 592 AFEFLNDALC 601
           A + L D LC
Sbjct: 401 ARDLL-DELC 409



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 161/314 (51%), Gaps = 21/314 (6%)

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           ++YN ++ G    G++D A     L+ E     D+ T+  LI GLC              
Sbjct: 1   MAYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLC-------------- 43

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
               G GR A+A ++++ M +  C  +  T   L+    + S  + A+ L  EM  KGC+
Sbjct: 44  ----GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 99

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P +V+YN ++NG+C+  R  +A  F+K +   G +P+ ++Y++++ GLC +++ + A +L
Sbjct: 100 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +  QKG  P+V  +N+LI  LC  G VE AL++   + K  C PN ++YN L+    K
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               DKA+   + ++     PDI+SYN  L  LC    +  A E L+    +G  P  I+
Sbjct: 220 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 279

Query: 611 WHILVRAVMNNGAS 624
           ++ ++  +   G +
Sbjct: 280 YNTVIDGLTKAGKT 293



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 190/436 (43%), Gaps = 51/436 (11%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           +A+RL+  +  E + +T   L          A++  +   +LRR   P +V +       
Sbjct: 18  AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI----- 72

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKR 114
                          +++A  K S   +A+ +   M +  GC   I         +C++ 
Sbjct: 73  ---------------LLEATCKRSGYKQAMKLLDEMRD-KGCTPDIVTYNVVVNGICQEG 116

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + + A  FL +L   G +P+  SY  V+ GL  +     A  +  EM ++G   NVV +N
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           +LI    +KG    A E+ E+ + +    PN ++YN +++  CK  + D+ +   D M  
Sbjct: 177 MLISFLCRKGLVEPALEVLEQ-IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D  +Y + +  LC++G V+ A  +  ++ + G     ++YN +IDG  +AGK KE
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 295

Query: 295 CFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             EL   M  KG   ++++Y+ +  GL    ++++AI  +  +++     ++  +  +I 
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GLCK    + AI                   L   M  +GC  N  T   L+ G      
Sbjct: 356 GLCKRRETHSAID------------------LFAYMIGNGCMPNESTYTILIEGLAYEGL 397

Query: 414 LENAIFLFKEM-SRKG 428
           ++ A  L  E+ SR G
Sbjct: 398 IKEARDLLDELCSRAG 413


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 251/518 (48%), Gaps = 31/518 (5%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVI 80
           +  F  A   PG+ H+ +  + +L   ++        R+ +  E+   + P+D    ++I
Sbjct: 1   MLFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFK-DELVTLFRPDDFTYGTLI 59

Query: 81  QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           + + K     +A+++   M           FG     LC     +KA +  + + +  +K
Sbjct: 60  RGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK 119

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD + Y  VI  L K   L  A + F+ M + G   + V Y +L+   FK   + +  +I
Sbjct: 120 PDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI 179

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           +E + +     P +VTY  ++NG CK GR D+ L +  R+K   R      Y + I GLC
Sbjct: 180 FEEM-LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 238

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K    + A  ++   + +G   D + Y + I G C+AGK+ E   +   M   GC  + V
Sbjct: 239 KHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPV 296

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SYN++I  L ++ +V EA  + +   E+ C        VL++GLCK+  + +A  IL  +
Sbjct: 297 SYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERM 356

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
            E G+     A S+V             T +++++G  +A +L++A  + ++M R GC P
Sbjct: 357 LETGD----RAPSVV-------------TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVP 399

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VV+Y  +I+  CKV R  EA    + M E+G   D++ Y++LI G C++ K+D A+ + 
Sbjct: 400 DVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMI 459

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            +   +G  P+V   + ++ GLC   +VE+A  L   M
Sbjct: 460 EEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 242/469 (51%), Gaps = 21/469 (4%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           D+ + +F+  +  +G      C+  Q  +A   L  +   G+ P + ++G++I  L +  
Sbjct: 42  DELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELN 101

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
               AL +F +M +  V+ +   Y ++I    K      A   +ER+V ++   P+ VTY
Sbjct: 102 FTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMV-QSGCLPDKVTY 160

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
            V+++ L K  ++++  ++++ M       +  TY + ++G CKAG ++ A  + R +  
Sbjct: 161 TVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKG 220

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
           +G       Y+ +IDG C+  +  E  EL+E M      +V+ Y   I GL + GK+DEA
Sbjct: 221 TGRSPSGSLYSTLIDGLCKHDRHDEARELFE-MAAGDVQDVIVYTSFISGLCKAGKLDEA 279

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            ++   + E  C  D  ++ V+I  LCK+                   R+++A  L+++ 
Sbjct: 280 KAVHVKMIEAGCAPDPVSYNVIIYSLCKDN------------------RVSEAKELMDQA 321

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC-SPTVVSYNTLINGLCKVER 448
            +  C      C  L++G  ++ ++E A  + + M   G  +P+VV+Y+ +I+GLCK +R
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             +AY  +++M   G  PD++TY+ +I+  C+  ++D A +L  +  ++G   DV  YNI
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           LI G C A KV++A+ +   M  R   PN+V+ +T++DGL K    ++A
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 246/494 (49%), Gaps = 26/494 (5%)

Query: 127 WEK---GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           W K   G + + Y+  +++   V  G    A  VF +        +   Y  LI GF K 
Sbjct: 6   WAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKA 65

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
               +A  +   +     + P +VT+  +I  LC+    D+ L+++ +M   + + D+F 
Sbjct: 66  EQIPQAVNLLGEM-KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFL 124

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   I  LCK   ++ A   +  MV+SG   D VTY  ++    +A K ++  +++E M 
Sbjct: 125 YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEML 184

Query: 304 RKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
            KG    +V+Y  ++ G  + G++D+A+S+   L+    +   + +  LI+GLCK+   +
Sbjct: 185 SKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHD 244

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A     E+ E   G + D                 YT  S ++G  +A KL+ A  +  
Sbjct: 245 EA----RELFEMAAGDVQDVI--------------VYT--SFISGLCKAGKLDEAKAVHV 284

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           +M   GC+P  VSYN +I  LCK  R  EA   + + +E+   P +   ++L++GLC+S+
Sbjct: 285 KMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR 344

Query: 483 KIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           +++ A  +  + L+ G   P V  Y+ +I GLC A +++DA  +   M++  CVP++VTY
Sbjct: 345 RVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTY 404

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             ++D   K G  D+A E++  + E     D+++YNI ++G C  +++ +A   + +   
Sbjct: 405 TAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAG 464

Query: 602 RGILPTTITWHILV 615
           RGI P  ++   +V
Sbjct: 465 RGIQPNVVSLSTIV 478



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 223/454 (49%), Gaps = 23/454 (5%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + N    N L++ F   G +  A  +++  ++ T   P+  TY  +I G CK  +  +
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELV-TLFRPDDFTYGTLIRGFCKAEQIPQ 70

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            + +   MK         T+ S I  LC+    + A +++ +M++  +  DA  Y  +I 
Sbjct: 71  AVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIG 130

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
             C+  K+      +E M + GCL + V+Y +L+  L +  K ++   I+E +  K  + 
Sbjct: 131 HLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSP 190

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  ++NG CK G +++A+ ++  ++  G GR + + SL +               +
Sbjct: 191 ELVTYATVVNGYCKAGRIDQALSLMRRLK--GTGR-SPSGSLYS---------------T 232

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++G  +  + + A  LF EM+  G    V+ Y + I+GLCK  +  EA +   +M+E G
Sbjct: 233 LIDGLCKHDRHDEARELF-EMA-AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD ++Y+++I  LC+  ++  A +L  Q +++   P V +  +L+ GLC + +VE+A 
Sbjct: 291 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 350

Query: 524 QLYSNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            +   M +  +  P++VTY+ ++DGL K    D A  +   +      PD+++Y   +  
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            C   R+ +A E       RG     + ++IL+R
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIR 444



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 190/385 (49%), Gaps = 22/385 (5%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D FTY + I G CKA  +  A  +  EM  +GI    VT+ ++I   C      +  +++
Sbjct: 51  DDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIF 110

Query: 300 -EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +++  K   +   Y ++I  L +  K+D A S +E + +  C  D  T+ VL++ L K 
Sbjct: 111 HQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKA 170

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
               +  QI  E+   G                H  +L  Y   +++NG+ +A +++ A+
Sbjct: 171 CKWEQGHQIFEEMLSKG----------------HSPELVTYA--TVVNGYCKAGRIDQAL 212

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + +   G SP+   Y+TLI+GLCK +R  EA    +  +  G   D+I Y+  I+GL
Sbjct: 213 SLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGL 270

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++ K+D A  +  + ++ G  PD   YN++I+ LC   +V +A +L     +R C+P +
Sbjct: 271 CKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGV 330

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLR-PDIISYNITLKGLCSCSRMSDAFEFLN 597
                L+DGL K+   ++A  I   +LE   R P +++Y+  + GLC   R+ DA+  L 
Sbjct: 331 PVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQ 390

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
                G +P  +T+  ++ A    G
Sbjct: 391 KMRRAGCVPDVVTYTAIIDAFCKVG 415



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 35/232 (15%)

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G + N YTCNSL+  F+                  GC                     
Sbjct: 10  RPGFQHNTYTCNSLLEVFVN----------------DGCH-------------------R 34

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EAY   K+ L   ++PD  TY  LI G C++++I  A+ L  +    G TP +  +  LI
Sbjct: 35  EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLI 94

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             LC     + ALQ++  M      P+   Y  ++  L K    D A   +  +++    
Sbjct: 95  RKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCL 154

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           PD ++Y + +  L    +     +   + L +G  P  +T+  +V      G
Sbjct: 155 PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAG 206



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWE 128
           +VI    K    D A  V Q+M    GC   ++         C+  + ++A+     + E
Sbjct: 371 AVIDGLCKADRLDDAYVVLQKMRRA-GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 429

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G   DV +Y  +I G  ++  +  A+A+ +EM  RG++ NVV  + ++DG  K+     
Sbjct: 430 RGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEE 489

Query: 189 AKEIWERLVMET 200
           A+ + E++  E+
Sbjct: 490 ARLLMEKMNFES 501


>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g57250, mitochondrial; Flags: Precursor
 gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 971

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 179/700 (25%), Positives = 313/700 (44%), Gaps = 97/700 (13%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED-- 74
           +P   L +     R  G   S   F  ++ R ++   + +   +LE++  +    P D  
Sbjct: 113 DPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNF 172

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNS 125
           V  +VI  + K   P+ AL  F+   +          +      LC+  + ++ +  +  
Sbjct: 173 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L ++G + D   Y   I+G  K G L+ AL    EM E+G+  +VV Y+ILIDG  K+G+
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A  +  +++ E  V PN++TY  +I GLCK G+ +E   +++R+     E D F Y 
Sbjct: 293 VEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-------- 297
           + I G+C+ GN+  A  +  +M + GI    +TYN +I+G C AG++ E  E        
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD 411

Query: 298 -------------------LWEVMGR----KGCLNVVSYNILIRGLLENGKVDEAISIWE 334
                              + E+  R    K  +++V  NIL++  L  G   EA +++ 
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------EGR 378
            + E +   D+ T+  +I G CK G + +A+++ NE+ +                  +G 
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGM 531

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMN------------GFI----------------- 409
           L  A  ++  + + G  L+ +T  +L++            G +                 
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591

Query: 410 ------QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
                 +    E AI ++  M RKG + T  S  T++  L    R  +AY  V    E  
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETT 649

Query: 464 WKP-DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
               D+I Y+++INGLC+   +  AL LC     +G T +   YN LI+GLC  G + +A
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L+L+ +++    VP+ VTY  L+D L K G    A ++ + ++ + L P+II YN  + G
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            C   +  DA   ++  +   + P   T   +++     G
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG 809



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 242/577 (41%), Gaps = 92/577 (15%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++   E+A   L  + ++G++P++ +Y  +I GL K G L  A  +F+ +   G+E +
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 346

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y  LIDG  +KG+  RA  +   +  +  + P+++TYN +INGLC  GR  E  E+ 
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCMAGRVSEADEVS 405

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEG------------------------------ 259
             +       D  TY + +    K  N++                               
Sbjct: 406 KGVVG-----DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLM 460

Query: 260 -----AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
                A+ +YR M E  +  D  TY  MI G+C+ G+I+E  E++  + +      V YN
Sbjct: 461 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYN 520

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTT-----HGVLING--------------- 354
            +I  L + G +D A  +   L EK    D  T     H +  NG               
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQL 580

Query: 355 ---------------LCKNGYLNKAIQILNEVEEGG---------------EGRLADAAS 384
                          LCK G    AI++   +   G                 R  DA  
Sbjct: 581 NSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYL 640

Query: 385 LV-NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           LV N  +     ++      ++NG  +   L  A+ L      +G +   ++YN+LINGL
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+     EA      +   G  P  +TY +LI+ LC+      A KL    + KG  P++
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN ++ G C  G+ EDA+++ S        P+  T ++++ G  K GD ++AL ++  
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
             ++ +  D   +   +KG C+  RM +A   L + L
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 249/559 (44%), Gaps = 64/559 (11%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L SL + G  P + S    +  L +       L  + ++  + +  N   Y+I+   F  
Sbjct: 14  LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMING--------------------------- 215
              Y  A++     + + S++P     + +I+G                           
Sbjct: 74  LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPS 133

Query: 216 -LCKC---------GRFDECLEMWDRM--KKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
            L  C         G  D  +E+ + M  K      D+F   + I G CK G  E A   
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 193

Query: 264 YREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +   V+SG+ V + VTY  ++   C+ GK+ E  +L   +  +G   + V Y+  I G  
Sbjct: 194 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 253

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGE---- 376
           + G + +A+     + EK  N D  ++ +LI+GL K G + +A+ +L + ++EG E    
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313

Query: 377 ------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                       G+L +A  L NR+   G +++ +   +L++G  +   L  A  +  +M
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            ++G  P++++YNT+INGLC   R  EA     + + KG   D+ITYS L++   + + I
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNI 428

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D  L++  +FL+     D+ M NIL+      G   +A  LY  M + +  P+  TY T+
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G  KTG  ++ALE++N + +  +    + YN  +  LC    +  A E L +   +G+
Sbjct: 489 IKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547

Query: 605 LPTTITWHILVRAVMNNGA 623
                T   L+ ++  NG 
Sbjct: 548 YLDIHTSRTLLHSIHANGG 566



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 137/599 (22%), Positives = 249/599 (41%), Gaps = 98/599 (16%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           L D  ++E     +  L   +++  ++P L+ + + I  L ++ K      V  + I + 
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE-EAFVLFNRILSV 341

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           G        +D F  +  I G     +CRK    +A   L  + ++G++P + +Y TVIN
Sbjct: 342 GIE------VDEFLYVTLIDG-----ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390

Query: 144 GL------------------------------VKSGDLLGALAVFDEMFERGVETNVVCY 173
           GL                              +K  ++   L +     E  +  ++V  
Sbjct: 391 GLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           NIL+  F   G Y  A  ++ R + E  + P+  TY  MI G CK G+ +E LEM++ ++
Sbjct: 451 NILLKAFLLMGAYGEADALY-RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG-------- 285
           K+     +  Y   I  LCK G ++ A  V  E+ E G+++D  T   ++          
Sbjct: 510 KSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568

Query: 286 ---------------------------FCRAGKIKECFELWEVMGRKGCLNVVSYNILIR 318
                                       C+ G  +   E++ +M RKG L V   + +++
Sbjct: 569 GILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKG-LTVTFPSTILK 627

Query: 319 GLLENGK-VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            L++N + +D  + +         + D   + ++INGLCK G+L KA+ + +  +  G  
Sbjct: 628 TLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 687

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          +G L +A  L + ++  G   +  T   L++   +     +A  L
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
              M  KG  P ++ YN++++G CK+ +  +A   V   +     PD  T S +I G C+
Sbjct: 748 LDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK 807

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
              ++ AL +  +F  K  + D   +  LI G C+ G++E+A  L   M     V  L+
Sbjct: 808 KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  Q E A R ++      + PD ++  ++I G  K GD+  AL+VF E  ++ +  + 
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV------VTYNVMING----LCKCG 220
             +  LI GF  KG    A+ +   +++  SV   +      +  +  I G    LC+ G
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQG 890

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV-DAVTY 279
           R  + +++ D       E  S  Y S    L     ++    V  E ++   +V D  + 
Sbjct: 891 RVPQAIKILD-------EISSTIYPSG-KNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSL 942

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           ++ +   C +GK+++  E   VM    C+
Sbjct: 943 HSTVSSLCTSGKLEQANEF--VMSVLSCM 969


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 244/493 (49%), Gaps = 20/493 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVET 168
           LC+    + A+ F   +   G   D +   +++    +  DL  A  VF++M  E     
Sbjct: 204 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP 263

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V Y+ILI G  + G    A ++ + +V E    P+  TY V+I   C  G  D+ ++M
Sbjct: 264 NSVTYSILIHGLCEAGRLEEAFQLKQEMV-EKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M       +  TY   I  LC+ G +E A  V+R+M++ G+    +T+NA+I+G+C+
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 382

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G +   F+L  VM +  C  N+ +YN L+ GL    K  +A  +   + +     D  T
Sbjct: 383 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 442

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMD 390
           + +L++G CK G LN A  I N +   G                  GRL  A  ++  M 
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 502

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           K G  L+  T  +L++G  +  K ++  FLF+ M    C  T  ++N  ++ L K  +  
Sbjct: 503 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA + + +M++ G  P ++T+++LI G C++ +  ++LK+  +  Q G +P+V  Y I+I
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC+ G+VE+A  +  +M      PN  TY  L+    K G  D+A +I + +++   +
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682

Query: 571 PDIISYNITLKGL 583
           P+   Y+  L G 
Sbjct: 683 PNSHIYSALLSGF 695



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 238/504 (47%), Gaps = 25/504 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + E G +     Y T++  L K      A  V+  M   G     + Y  +++   K
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 183 KGDYMRAKEIW--ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EK 239
            G +++A E++  + L +   +  +V T  V+ N  C+     E   ++++M K E    
Sbjct: 207 NG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEENCRP 263

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +S TY   IHGLC+AG +E A ++ +EMVE G      TY  +I   C  G   +  ++ 
Sbjct: 264 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 323

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M  K C+ NV +Y ILI  L   GK++EA  ++  + +        T   LING CK 
Sbjct: 324 DEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 383

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G++  A Q+L+ +E+G                   CK N  T N LM G  + SK   A 
Sbjct: 384 GWVVSAFQLLSVMEKGN------------------CKPNIRTYNELMEGLCRVSKSYKAF 425

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + +   G  P  V+YN L++G CK  +   A++    M   G +PD  T++ LI+GL
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 485

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  +++ A  +    ++KG + D   +  LI G C  GK +D   L+ NM +  C+   
Sbjct: 486 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 545

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            T+N  +D L K    ++A  +   +++  L P ++++ I ++G C     + + + L  
Sbjct: 546 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
               G  P   T+ I++  + NNG
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNG 629



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 272/596 (45%), Gaps = 51/596 (8%)

Query: 75  VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNS 125
           V  S++ A  +     +A  VF++M++   C             LC   + E+A +    
Sbjct: 231 VCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQE 290

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + EKG +P   +Y  +I      G    A+ + DEM  +    NV  Y ILID   ++G 
Sbjct: 291 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 350

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A  ++ ++ ++  + P ++T+N +ING CK G      ++   M+K   + +  TY 
Sbjct: 351 IEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 409

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             + GLC+      A  + R +V++G+  D VTYN ++DGFC+ G++   F ++  M   
Sbjct: 410 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 469

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   +  ++  LI GL + G++++A  I   + +K  + D  T   LI+G CK G     
Sbjct: 470 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 529

Query: 365 IQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +   + E                 G + +L +A +++ +M K+G   +  T   L+ G
Sbjct: 530 CFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEG 589

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A +   ++ + + M + GCSP V +Y  +INGLC   R  EA + +  M   G  P+
Sbjct: 590 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 649

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG------------LCS 515
             TY++L+    ++ ++D A ++    ++ G  P+  +Y+ L+ G            L S
Sbjct: 650 HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 709

Query: 516 AGKVEDALQLYSNMKKRNC---------VPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            G + DA  L S     NC         VP    YN L+ GL K G   +A ++   +++
Sbjct: 710 TGDL-DARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVK 768

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             L PD    +I ++  C   +  +  EF+   L    +P+  ++  ++  + N G
Sbjct: 769 HGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 823



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 262/581 (45%), Gaps = 89/581 (15%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I+A     M DKA+ +   M     C   +         LCR+ + E+A      + + 
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P + ++  +ING  K G ++ A  +   M +   + N+  YN L++G  +     +A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  R+V +  + P+ VTYN++++G CK G+ +    +++ M     E D FT+ + I 
Sbjct: 425 FLLLRRVV-DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCK G +E A  +   MV+ GI +D VT+ A+IDG C+ GK K+   L+E M    CL 
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 309 -----------------------------------NVVSYNILIRGLLENGKVDEAISIW 333
                                              +VV++ ILI G    G+   ++ + 
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------E 376
           E +++  C+ +  T+ ++INGLC NG + +A  IL  +   G                  
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA--------------------SKLEN 416
           GRL  A  +V+ M K+GC+ N++  ++L++GF+ +                    S  EN
Sbjct: 664 GRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEN 723

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
                    +K   PT   YN L+ GLCK  R  EA    ++M++ G  PD    S+ I 
Sbjct: 724 DNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IE 782

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
             C++ K D  L+     L   F P    Y  +IHGL + G+V++A +L S++ +   + 
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 842

Query: 537 NLVTYNTLMDGLFK--TGDCDKALEIWNHI--LEERLRPDI 573
             V     ++ L K    D DK L++   I  +  + RP I
Sbjct: 843 EEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 883


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 25/459 (5%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +++  +I GL K+G L  A+  +++M ER    N+   N+L+    + G   +A  I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN-EREKDSFTYCSFIHGL 251
           +  +       P+V+T N++ING C+    D+ LE++  M+KN     ++ TY + I   
Sbjct: 61  FRGI----QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           CK   ++ A ++  E   S    D +   ++  GFC+A ++ E ++L   M  K     +
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V++N++I G  + G+V EA  + E L    C  ++ T+  LI+G CK+G L++A+Q+  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                          +++  D H  + N  T N+L++G  +A +LE+A  L K+M  +  
Sbjct: 235 ---------------VLSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
                +Y TL++GLCK  R  E     +EML +G  P ++TY+ L++  C++  +  A +
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQ 338

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +    + KG  PDVT Y +L+ GL   GKV  A + +  + +  C P  V Y+ L+ G  
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCC 398

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           K    D+A++ +  +L+ RL PD  +  + ++ LC   R
Sbjct: 399 KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 235/460 (51%), Gaps = 31/460 (6%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N   +++LI G  K G    A E + ++ +E    PN+   N+++  LC+ G+ D+ + +
Sbjct: 2   NRFTFSVLIAGLCKAGRLGEAVECYNQM-LERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV-DAVTYNAMIDGFC 287
           +  ++ +       T    I+G C+   ++ A  ++ EM ++   V +A TY A+I  +C
Sbjct: 61  FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 288 RAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNAD 344
           +  ++ +  +L E      C   +V++   + RG  +  +VDEA  +  +++ +K+   D
Sbjct: 118 KMDRLDQARQLLE---ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
                V+I+G CK G + +A ++L               +LV+     GC  NA T  +L
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLE--------------TLVS----MGCVPNAVTYTTL 216

Query: 405 MNGFIQASKLENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++GF ++  L  A+ LFK +S +     P VV++N LI+GLCK +R   A+  VK+M  +
Sbjct: 217 IDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
             + D  TY+ L++GLC+  +     ++  + L++G  P V  Y  L+H  C AG ++DA
Sbjct: 277 DLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDA 336

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            Q+  +M  +   P++ TY  L++GLF+ G    A E +  IL ER  P  + Y+  ++G
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            C  + + +A ++  + L R + P   T  +LV  +   G
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 182/350 (52%), Gaps = 26/350 (7%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
           T++ +I G C+AG++ E  E +  M  + C+ N+   N+L+  L + GK+D+A++I+   
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF--- 61

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
           R   C+    T  +LING C+   L+KA+++ +E+E+          +LV          
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN--------FALVP--------- 104

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A T  +++  + +  +L+ A  L +E S   CS  V++  ++  G CK +R  EAY  +
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLL 162

Query: 457 KEMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            +M+EK   KPD++ ++++I+G C++ ++  A ++    +  G  P+   Y  LI G C 
Sbjct: 163 LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCK 222

Query: 516 AGKVEDALQLYSNMKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           +G + +ALQL+  +  R+    PN+VT+N L+ GL K    + A E+   +    LR D 
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +Y   + GLC   R S+      + L  G  P+ +T+  LV A    G+
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 152/298 (51%), Gaps = 9/298 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR-------FLNSLWEKG 130
           ++I+ Y K    D+A  + +  +        I    R F KA+R        L+ + +K 
Sbjct: 111 AIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            KPD+ ++  +I+G  K+G +  A  + + +   G   N V Y  LIDGF K G+   A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 191 EIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++++ L   +    PNVVT+N +I+GLCK  R +   E+  +MK  +   D+FTY + + 
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLCK G      RV+ EM+  G     VTY  ++   C+AG +++  ++   M  KG   
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +V +Y +L+ GL ENGKV  A   +E +  + C   +  +  L+ G CK   +++A++
Sbjct: 351 DVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVK 408



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 164/322 (50%), Gaps = 29/322 (9%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  ++++LI GL + G++ EA+  +  + E++C  +     +L+  LC+ G +++A+ I 
Sbjct: 2   NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF 61

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK- 427
             ++                     C  +  T N L+NGF +   L+ A+ LF EM +  
Sbjct: 62  RGIQ---------------------CSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P   +Y  +I   CK++R  +A   ++E        D+I  + +  G C+++++D A
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEA 158

Query: 488 LKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            +L    ++K    PD+  +N++IHG C AG+V +A ++   +    CVPN VTY TL+D
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 547 GLFKTGDCDKALEIWNHILEER---LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           G  K+G+  +AL+++  +L  R     P+++++N  + GLC   R+  AFE +     R 
Sbjct: 219 GFCKSGNLSEALQLFK-VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 604 ILPTTITWHILVRAVMNNGAST 625
           +   T T+  L+  +   G ++
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTS 299


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 244/493 (49%), Gaps = 20/493 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVET 168
           LC+    + A+ F   +   G   D +   +++    +  DL  A  VF++M  E     
Sbjct: 138 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRP 197

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V Y+ILI G  + G    A ++ + +V E    P+  TY V+I   C  G  D+ ++M
Sbjct: 198 NSVTYSILIHGLCEAGRLEEAFQLKQEMV-EKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            D M       +  TY   I  LC+ G +E A  V+R+M++ G+    +T+NA+I+G+C+
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G +   F+L  VM +  C  N+ +YN L+ GL    K  +A  +   + +     D  T
Sbjct: 317 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 376

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMD 390
           + +L++G CK G LN A  I N +   G                  GRL  A  ++  M 
Sbjct: 377 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 436

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           K G  L+  T  +L++G  +  K ++  FLF+ M    C  T  ++N  ++ L K  +  
Sbjct: 437 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA + + +M++ G  P ++T+++LI G C++ +  ++LK+  +  Q G +P+V  Y I+I
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC+ G+VE+A  +  +M      PN  TY  L+    K G  D+A +I + +++   +
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616

Query: 571 PDIISYNITLKGL 583
           P+   Y+  L G 
Sbjct: 617 PNSHIYSALLSGF 629



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 238/504 (47%), Gaps = 25/504 (4%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L+ + E G +     Y T++  L K      A  V+  M   G     + Y  +++   K
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 183 KGDYMRAKEIW--ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EK 239
            G +++A E++  + L +   +  +V T  V+ N  C+     E   ++++M K E    
Sbjct: 141 NG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEESCRP 197

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +S TY   IHGLC+AG +E A ++ +EMVE G      TY  +I   C  G   +  ++ 
Sbjct: 198 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 257

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M  K C+ NV +Y ILI  L   GK++EA  ++  + +        T   LING CK 
Sbjct: 258 DEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 317

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G++  A Q+L+ +E+G                   CK N  T N LM G  + SK   A 
Sbjct: 318 GWVVSAFQLLSVMEKGN------------------CKPNIRTYNELMEGLCRVSKSYKAF 359

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L + +   G  P  V+YN L++G CK  +   A++    M   G +PD  T++ LI+GL
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+  +++ A  +    ++KG + D   +  LI G C  GK +D   L+ NM +  C+   
Sbjct: 420 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            T+N  +D L K    ++A  +   +++  L P ++++ I ++G C     + + + L  
Sbjct: 480 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
               G  P   T+ I++  + NNG
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNG 563



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 254/556 (45%), Gaps = 34/556 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +I+A     M DKA+ +   M     C   +         LCR+ + E+A      + + 
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL P + ++  +ING  K G ++ A  +   M +   + N+  YN L++G  +     +A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +  R+V +  + P+ VTYN++++G CK G+ +    +++ M     E D FT+ + I 
Sbjct: 359 FLLLRRVV-DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           GLCK G +E A  +   MV+ GI +D VT+ A+IDG C+ GK K+   L+E M    CL 
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 310 VV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
              ++N  +  L ++ K++EA ++   + +        TH +LI G C+           
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR----------- 526

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G  A +  ++ RM + GC  N YT   ++NG     ++E A  +   MS  G
Sbjct: 527 -------AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 579

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI--DM 486
            SP   +Y  L+    K  R   A+  V  M++ G +P+   YS L++G   S       
Sbjct: 580 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 639

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL        +  + +    N L   +     V+ AL++   +KK   VP    YN L+ 
Sbjct: 640 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVV 698

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           GL K G   +A ++   +++  L PD    +I ++  C   +  +  EF+   L    +P
Sbjct: 699 GLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVP 757

Query: 607 TTITWHILVRAVMNNG 622
           +  ++  ++  + N G
Sbjct: 758 SFASYCWVIHGLRNEG 773



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 137/359 (38%), Gaps = 55/359 (15%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F C    L +  +  +A   L  + + GL P V ++  +I G  ++G+   +L + + M 
Sbjct: 482 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G   NV  Y I+I+G    G    A+ I   +     V PN  TY V++    K GR 
Sbjct: 542 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM-SSFGVSPNHFTYAVLVKAHVKAGRL 600

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           D   ++   M KN  + +S  Y + + G   +    GA    R +  +G        +  
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA----RALSSTGDLDARSLSSEE 656

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
            D  C +  +   F L +                         VD A+ I + +  K C 
Sbjct: 657 NDNNCLSSHV---FRLMD-------------------------VDHALKIRDEI--KKCG 686

Query: 343 ADSTT-HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +   +  L+ GLCK G                  R+ +A  L   M KHG        
Sbjct: 687 VPTEDLYNFLVVGLCKEG------------------RIIEADQLTQDMVKHGL-FPDKAI 727

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
           +S++  + +  K +N +   K +      P+  SY  +I+GL    R  EA   V +++
Sbjct: 728 SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 25/459 (5%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P+ +++  +I GL K+G L  A+  +++M ER    N+   N+L+    + G   +A  I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN-EREKDSFTYCSFIHGL 251
           +  +       P+V+T N++ING C+    D+ LE++  M+KN     ++ TY + I   
Sbjct: 61  FRGI----QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           CK   ++ A ++  E   S    D +   ++  GFC+A ++ E ++L   M  K     +
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V++N++I G  + G+V EA  + E L    C  ++ T+  LI+G CK+G L++A+Q+  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                          +++  D H  + N  T N+L++G  +A +LE+A  L K+M  +  
Sbjct: 235 ---------------VLSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
                +Y TL++GLCK  R  E     +EML +G  P ++TY+ L++  C++  +  A +
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQ 338

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +    + KG  PDVT Y +L+ GL   GKV  A + +  + +  C P  V Y+ L+ G  
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCC 398

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           K    D+A++ +  +L+ RL PD  +  + ++ LC   R
Sbjct: 399 KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 231/452 (51%), Gaps = 31/452 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE-- 167
           LC+  +  +A    N + E+   P++     ++  L ++G +  A+A+F     RG++  
Sbjct: 13  LCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF-----RGIQCS 67

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +V+  NILI+GF +     +A E++  +    ++ P   TY  +I   CK  R D+  +
Sbjct: 68  PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQ 127

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGF 286
           + +  + +    D     S   G CKA  V+ A ++  +MVE      D V +N +I GF
Sbjct: 128 LLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AG+++E +E+ E +   GC+ N V+Y  LI G  ++G + EA+ ++++L  ++ +A+ 
Sbjct: 186 CKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEP 245

Query: 346 --TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
              T   LI+GLCK                    RL  A  LV +M     + + +T  +
Sbjct: 246 NVVTFNALISGLCK------------------ADRLEHAFELVKQMKARDLRADTFTYTT 287

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           LM+G  +  +      +F+EM R+GC+P+VV+Y TL++  CK     +A   ++ M+ KG
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD+ TY++L+ GL ++ K+  A +   + L++   P   +Y+ L+ G C A  V++A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + Y  M  R   P+  T   L++ L K G  D
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 223/442 (50%), Gaps = 29/442 (6%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN  T++V+I GLCK GR  E +E +++M +     +       +  LC+AG ++ A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLL 321
           +R +  S      +T N +I+GFC    + +  EL+  M +   L     +Y  +I+   
Sbjct: 61  FRGIQCSP---SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 322 ENGKVDEAISIWELLREKNC-NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE---- 376
           +  ++D+A    +LL E +C ++D      +  G CK   +++A Q+L ++ E       
Sbjct: 118 KMDRLDQA---RQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 377 --------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                         GR+ +A  ++  +   GC  NA T  +L++GF ++  L  A+ LFK
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 423 EMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            +S +     P VV++N LI+GLCK +R   A+  VK+M  +  + D  TY+ L++GLC+
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             +     ++  + L++G  P V  Y  L+H  C AG ++DA Q+  +M  +   P++ T
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L++GLF+ G    A E +  IL ER  P  + Y+  ++G C  + + +A ++  + L
Sbjct: 355 YTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEML 414

Query: 601 CRGILPTTITWHILVRAVMNNG 622
            R + P   T  +LV  +   G
Sbjct: 415 DRRLAPDPATCKLLVEMLCKRG 436



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 181/350 (51%), Gaps = 26/350 (7%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELL 336
           T++ +I G C+AG++ E  E +  M  + C+ N+   N+L+  L + G +D+A++I+   
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF--- 61

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
           R   C+    T  +LING C+   L+KA+++ +E+E+          +LV          
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN--------FALVP--------- 104

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
            A T  +++  + +  +L+ A  L +E S   CS  V++  ++  G CK +R  EAY  +
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLL 162

Query: 457 KEMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            +M+EK   KPD++ ++++I+G C++ ++  A ++    +  G  P+   Y  LI G C 
Sbjct: 163 LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCK 222

Query: 516 AGKVEDALQLYSNMKKRN--CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           +G + +ALQL+  +  R+    PN+VT+N L+ GL K    + A E+   +    LR D 
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            +Y   + GLC   R S+      + L  G  P+ +T+  LV A    G+
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 152/298 (51%), Gaps = 9/298 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR-------FLNSLWEKG 130
           ++I+ Y K    D+A  + +  +        I    R F KA+R        L+ + +K 
Sbjct: 111 AIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            KPD+ ++  +I+G  K+G +  A  + + +   G   N V Y  LIDGF K G+   A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 191 EIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           ++++ L   +    PNVVT+N +I+GLCK  R +   E+  +MK  +   D+FTY + + 
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLCK G      RV+ EM+  G     VTY  ++   C+AG +++  ++   M  KG   
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           +V +Y +L+ GL ENGKV  A   +E +  + C   +  +  L+ G CK   +++A++
Sbjct: 351 DVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVK 408



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 164/322 (50%), Gaps = 29/322 (9%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  ++++LI GL + G++ EA+  +  + E++C  +     +L+  LC+ G +++A+ I 
Sbjct: 2   NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF 61

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK- 427
             ++                     C  +  T N L+NGF +   L+ A+ LF EM +  
Sbjct: 62  RGIQ---------------------CSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              P   +Y  +I   CK++R  +A   ++E        D+I  + +  G C+++++D A
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEA 158

Query: 488 LKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            +L    ++K    PD+  +N++IHG C AG+V +A ++   +    CVPN VTY TL+D
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 547 GLFKTGDCDKALEIWNHILEER---LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           G  K+G+  +AL+++  +L  R     P+++++N  + GLC   R+  AFE +     R 
Sbjct: 219 GFCKSGNLSEALQLFK-VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 604 ILPTTITWHILVRAVMNNGAST 625
           +   T T+  L+  +   G ++
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTS 299


>gi|357506233|ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498420|gb|AES79623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 737

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 250/508 (49%), Gaps = 26/508 (5%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R F+ A R    +  +G  P+V SY T+ING    G +  A+ VFDEM E G+E N + Y
Sbjct: 125 RPFD-AHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTY 183

Query: 174 NILIDGFFKKGDYMRAKEI----WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++LI GF +  D+   +E+    WER+ ME  +  NV  +  +I+ LCK G F+E  E+ 
Sbjct: 184 SVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIA 243

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       +   Y   I   CK G   GA R+   M +       V+YN +I G  + 
Sbjct: 244 ELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKD 303

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G     ++L E     G  L   +Y +L+  L     VD+A  + +L+  K     +  +
Sbjct: 304 GDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIY 363

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            + +  LC   ++N   ++LN               LV  ++ H C+ +  T N+++NGF
Sbjct: 364 NIYLRALC---HVNNPTELLN--------------VLVFMLESH-CQTDVITLNTVINGF 405

Query: 409 IQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGLCKVERFGEAYS-FVKEMLEKGWKP 466
            +  + + A+ +  +M   K C+P VV++ TLI+GL   E+  EA   F + M E G KP
Sbjct: 406 CKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKP 465

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            ++TY++LI  L + K+ + A ++       G TPD T Y +++ GLC   ++E+A   +
Sbjct: 466 GVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFW 525

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            ++   + + +   Y  ++ GL  +G  ++A      +++  + P+I SYNI +   C+ 
Sbjct: 526 QSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILINCACNL 585

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHIL 614
               + ++ + +    G+ P  +TW IL
Sbjct: 586 GLKREVYQIVREMNKNGVAPDCVTWRIL 613



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 241/505 (47%), Gaps = 31/505 (6%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           + G  P + +Y  +++          A  +F +M  RG   NVV Y  LI+G+   G   
Sbjct: 103 KAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIR 162

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM----WDRMK-KNEREKDSF 242
            A ++++ + +E+ + PN +TY+V+I G  +   F+   E+    W+RMK ++E   +  
Sbjct: 163 DAMKVFDEM-LESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVA 221

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
            + + I  LCK G       +   M       + V Y  MID FC+ G+      +  +M
Sbjct: 222 AFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLM 281

Query: 303 -GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             R+   + VSYN +I GL ++G       + E   E   +    T+ VL+  LC+   +
Sbjct: 282 RKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDV 341

Query: 362 NKAIQILNEV--EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           +KA ++L  +  +EG      D   + N   +  C +N  T   L+N           + 
Sbjct: 342 DKAREVLKLMLYKEG-----VDKTRIYNIYLRALCHVNNPT--ELLN-----------VL 383

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGL 478
           +F  M    C   V++ NT+ING CK+ RF EA   + +ML  K   PD++T++ LI+GL
Sbjct: 384 VF--MLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGL 441

Query: 479 CQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
             ++K+D AL L  + + + G  P V  YN+LI  L    +  DA ++++NM      P+
Sbjct: 442 LDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPD 501

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
             TY  +++GL +    ++A   W  ++      D   Y   LKGLCS  + ++A  FL 
Sbjct: 502 STTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLY 561

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           + +  GI P   +++IL+    N G
Sbjct: 562 ELVDSGISPNIYSYNILINCACNLG 586



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 203/480 (42%), Gaps = 62/480 (12%)

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           S  P+  T + +++ LC   RF+E  + +     +    D  T    +  L ++      
Sbjct: 33  SFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPFQT 92

Query: 261 ERVYREMVE--SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILI 317
             + + +++  +G     V YN ++D FC   +  +   L+  M  +G C NVVSY  LI
Sbjct: 93  WSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLI 152

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLING----------------------- 354
            G    G + +A+ +++ + E     +S T+ VLI G                       
Sbjct: 153 NGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKM 212

Query: 355 -----------------LCKNGYLNKAIQILNEVEEGGE-----------------GRLA 380
                            LCK G+ N+  +I   +  G                   GR  
Sbjct: 213 EDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYH 272

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
            AA +V  M K     +  + N +++G  +         L +E +  G S    +Y  L+
Sbjct: 273 GAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLV 332

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
             LC+V    +A   +K ML K        Y++ +  LC        L +    L+    
Sbjct: 333 EALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQ 392

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            DV   N +I+G C  G+ ++AL++ ++M   + C P++VT+ TL+ GL      D+AL+
Sbjct: 393 TDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALD 452

Query: 560 IWNHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           ++N ++ E  L+P +++YN+ ++ L    R +DAFE  N+    GI P + T+ ++V  +
Sbjct: 453 LFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGL 512



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 168/379 (44%), Gaps = 28/379 (7%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           ++G      C+  ++  A R +  + ++   P   SY  +I+GL K GD +    + +E 
Sbjct: 257 VYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEG 316

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            E G       Y +L++   +  D  +A+E+ + ++ +  V    + YN+ +  LC    
Sbjct: 317 AEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRI-YNIYLRALCHVNN 375

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTY 279
             E L +   M ++  + D  T  + I+G CK G  + A +V  +M+  G F   D VT+
Sbjct: 376 PTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDML-LGKFCAPDVVTF 434

Query: 280 NAMIDGFCRAGKIKECFELW-EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
             +I G   A K+ E  +L+  VM   G    VV+YN+LIR L +  + ++A  ++  + 
Sbjct: 435 TTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMA 494

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV--EEGGEGRLADAASLVNRMDKHGCK 395
                 DSTT+ V++ GLC+   + +A      V    G       AA            
Sbjct: 495 GDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAA------------ 542

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
                   ++ G   + K   A     E+   G SP + SYN LIN  C +    E Y  
Sbjct: 543 --------ILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQI 594

Query: 456 VKEMLEKGWKPDMITYSLL 474
           V+EM + G  PD +T+ +L
Sbjct: 595 VREMNKNGVAPDCVTWRIL 613



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 2/163 (1%)

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           + S     P+  + +T+++ LC   RF EA+      L  G  PD  T +LL+  L +SK
Sbjct: 28  QFSSLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSK 87

Query: 483 KIDMALKLCCQFLQ--KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
                  L    +Q   GF P +  YN L+   C   +  DA +L+ +MK R   PN+V+
Sbjct: 88  TPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVS 147

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           Y TL++G    G    A+++++ +LE  L P+ ++Y++ ++G 
Sbjct: 148 YTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGF 190



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 17/247 (6%)

Query: 52  KLVVHVSRILELIEIQ----KCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGC 105
           + + HV+   EL+ +     + +C  DV    +VI  + K    D+AL V   M     C
Sbjct: 368 RALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFC 427

Query: 106 E----------AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
                      +G+L  ++  E    F   + E GLKP V +Y  +I  L K      A 
Sbjct: 428 APDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAF 487

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            VF+ M   G+  +   Y ++++G  +      AK  W+ ++  + ++ N V Y  ++ G
Sbjct: 488 EVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFV-YAAILKG 546

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC  G+F+E       +  +    + ++Y   I+  C  G      ++ REM ++G+  D
Sbjct: 547 LCSSGKFNEACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPD 606

Query: 276 AVTYNAM 282
            VT+  +
Sbjct: 607 CVTWRIL 613



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 8/170 (4%)

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           F+ +     ++P   T S +++ LC S + + A +    FL  G  PD    N+L+  L 
Sbjct: 25  FILQFSSLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLL 84

Query: 515 SAGKVEDALQLYSNMK-----KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
              + +   Q +S +K     K   VP+LV YN LMD          A  ++  +     
Sbjct: 85  ---RSKTPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGH 141

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            P+++SY   + G CS   + DA +  ++ L  G+ P ++T+ +L+R  +
Sbjct: 142 CPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFL 191


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 230/494 (46%), Gaps = 24/494 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMF---ERGVETNVVCYNILIDGFFKKGDYMRAK 190
           D  SY TV+  L + G    A A+   M          N V Y +L+       D +  +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC--ADRLADQ 133

Query: 191 EI-WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +   R +    V  +VVTY  +I GLC     D+ +E+   M ++  E +   Y S + 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G CK+G  E   +V+ EM E GI  D V Y  +ID  C+ GK K+   + ++M R+G   
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+YN+LI  + + G V EAI + + + EK    D  T+  LI GL     +++A+ +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+  G                K+  K N  T NS++ G     ++  A  +   M   G
Sbjct: 314 EEMVRG----------------KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C   +V+YN LI GL +V +  +A   + EM   G +PD  TYS+LI G C+  ++D A 
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L      +G  P++  Y  L+  +C  G +E A  L++ M   N   ++V Y+T++ G 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGA 476

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD   A E+   I++E L PD ++Y+I +        M  A   L      G LP  
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 609 ITWHILVRAVMNNG 622
             +  L++     G
Sbjct: 537 AVFDSLIQGYSTKG 550



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 244/500 (48%), Gaps = 32/500 (6%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P  V+ +V+ +A   + + D+A+ + + M           +G     LC   + +KA   
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  + E G++P+V  Y +++ G  KSG       VF EM E+G+E +VV Y  LID   K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G   +A  + + +V    + PNVVTYNV+IN +CK G   E + +  +M +     D  
Sbjct: 233 VGKAKKAHGVMDMMV-RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELWE 300
           TY + I GL     ++ A  +  EMV     V  + VT+N++I G C  G++++ F++  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M   GC+ N+V+YN+LI GLL   KV +A+ + + +       DS T+ +LI G CK  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +++A                    L++ M   G +   +    L+    +   +E A  
Sbjct: 412 QVDRA------------------EDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARN 453

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF EM        VV+Y+T+I+G CK      A   +K ++++G  PD +TYS++IN   
Sbjct: 454 LFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S  ++ A  +  Q    GF PDV +++ LI G  + G++   L+L   M  +N   +  
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572

Query: 540 TYNTLMDGLFKTGDCDKALE 559
             +TL   L  + +    L+
Sbjct: 573 IISTLSTSLVASNEGKALLQ 592



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 232/503 (46%), Gaps = 59/503 (11%)

Query: 110 LCRKRQFEKAKRFLNSLW---EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR+   ++A   L ++        +P+  SY  ++  L        A+ +   M   GV
Sbjct: 87  LCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGV 146

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV Y  LI G     +  +A E+   +  E+ + PNVV Y+ ++ G CK GR+++  
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMC-ESGIEPNVVVYSSLLQGYCKSGRWEDVG 205

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++  M +   E D   Y   I  LCK G  + A  V   MV  G+  + VTYN +I+  
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE-LLREKN-CNA 343
           C+ G +KE   + + M  KG   +VV+YN LI+GL +  ++DEA+ + E ++R KN    
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T   +I GLC  G + +A Q+   +EE G                  C +N  T N 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG------------------CMVNLVTYNL 367

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ G ++  K+  A+ L  EM+  G  P   +Y+ LI G CK+ +   A   +  M ++G
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 464 WKP----------------------------------DMITYSLLINGLCQSKKIDMALK 489
            +P                                  D++ YS +I+G C++  +  A +
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L    + +G TPD   Y+I+I+    +G +E A  +   M     +P++  +++L+ G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 550 KTGDCDKALEIWNHILEERLRPD 572
             G+ +K LE+   ++ + +  D
Sbjct: 548 TKGEINKVLELIREMITKNIALD 570



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 431 PTV---VSYNTLINGLCKVERFGEAYSFVKEM-LEK--GWKPDMITYSLLINGLCQSKKI 484
           P+V   VSYNT++  LC+      A + ++ M LE     +P+ ++Y++L+  LC  +  
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+ L       G   DV  Y  LI GLC A +V+ A++L   M +    PN+V Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G  K+G  +   +++  + E+ + PD++ Y   +  LC   +   A   ++  + RG+
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 605 LPTTITWHILVRAVMNNGA 623
            P  +T+++L+  +   G+
Sbjct: 252 EPNVVTYNVLINCMCKEGS 270


>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
 gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
          Length = 668

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 255/502 (50%), Gaps = 24/502 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A R L  +  +G  P + SY T++NG  K G++  A  +FDEM E GV  N + Y++LI 
Sbjct: 176 AHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIR 235

Query: 179 GFFKKGDYMRAKEI----WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           G  +K D  R +E+    ++R+  E     N   ++ +++ LC+ G F+E   + + M +
Sbjct: 236 GVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQ 295

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
             R  + F Y   I  LCK G   GA RV   M + G     V+YN++I G C+ G    
Sbjct: 296 GNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMR 355

Query: 295 CFELWEV-MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            ++L E  +G    L+  +Y +L+  L +   +D+A  + +++  K     +  + + + 
Sbjct: 356 AYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLR 415

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            LC    +N   ++LN               ++  M +  C+ +  T N+++NGF +  +
Sbjct: 416 ALC---LMNNPTELLN---------------VLVSMLQTNCQPDVITLNTVINGFCKMGR 457

Query: 414 LENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +E A+ +  +M + K  +P  V++ ++I+GL  V R  EA + + +MLEKG  P ++TY+
Sbjct: 458 VEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYN 517

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            ++ GL + +    A+ +  + +  G   +   Y+I++ GLC +G+++ A + +  +   
Sbjct: 518 AILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWP 577

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           + + +   Y  ++ GL ++G  ++A+     +++  + P+I+SYNI +   CS     +A
Sbjct: 578 SKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREA 637

Query: 593 FEFLNDALCRGILPTTITWHIL 614
           ++   +    G+ P  +TW  L
Sbjct: 638 YQIAGEMQKNGLTPDAVTWRTL 659



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 240/551 (43%), Gaps = 65/551 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE-- 167
           LC   +F +A + L         PD  +   ++  L+ S D    L V   + E   E  
Sbjct: 95  LCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFV 154

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +++ YN LID F        A  +   ++      P++V+Y  ++NG  K G   +  +
Sbjct: 155 PSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHC-PSIVSYTTLVNGYSKIGEISDAYK 213

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVE-GAERVY----REMVESGIFVDAVTYNAM 282
           ++D M +     +S +Y   I G+ +  ++E G E ++    R   E    V++  ++ +
Sbjct: 214 LFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNL 273

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNC 341
           +D  CR G   E F + E M +   +N   +Y  LI  L + G+   A  +  ++R+K  
Sbjct: 274 VDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGF 333

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-GEGRLADAASLVNRMDKHGCKLNAYT 400
                ++  +I+GLCK G   +A Q+L   EEG G G L                L+ YT
Sbjct: 334 TPSVVSYNSIIHGLCKEGGCMRAYQLL---EEGVGFGYL----------------LSEYT 374

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
              L+    QA  L+ A  + K M  KG       YN  +  LC +    E  + +  ML
Sbjct: 375 YKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSML 434

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGLCSAGKV 519
           +   +PD+IT + +ING C+  +++ ALK+    +   F+ PD   +  +I GL + G+ 
Sbjct: 435 QTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRS 494

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFK----------------------------- 550
           ++A  L   M ++   P +VTYN ++ GLFK                             
Sbjct: 495 QEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSII 554

Query: 551 ------TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
                 +G  D A + W+ ++      D   Y   LKGLC    +++A  FL + +  G+
Sbjct: 555 VEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDSGV 614

Query: 605 LPTTITWHILV 615
            P  ++++I++
Sbjct: 615 NPNIVSYNIVI 625



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 198/440 (45%), Gaps = 61/440 (13%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAER------------------------------------V 263
           DS    S IHGLC A     A +                                    +
Sbjct: 84  DSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVI 143

Query: 264 YREMVESGIFVDA-VTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLL 321
           +R +     FV + + YN +ID FC           L++++ R  C ++VSY  L+ G  
Sbjct: 144 HRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLVNGYS 203

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA---IQILNEVEEGGEGR 378
           + G++ +A  +++ + E     +S ++ +LI G+ +   + +    + +L +     E +
Sbjct: 204 KIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQ 263

Query: 379 LADAASLVNRMD------------------KHGCKLNA-YTCNSLMNGFIQASKLENAIF 419
             ++A+  N +D                    G ++N  +    L++   +  +   A  
Sbjct: 264 SVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASR 323

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +   M +KG +P+VVSYN++I+GLCK      AY  ++E +  G+     TY +L+  LC
Sbjct: 324 VVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALC 383

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q+  +D A ++    L KG      +YNI +  LC      + L +  +M + NC P+++
Sbjct: 384 QAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVI 443

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLR-PDIISYNITLKGLCSCSRMSDAFEFLND 598
           T NT+++G  K G  ++AL++ N ++  +   PD +++   + GL +  R  +A   L  
Sbjct: 444 TLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQ 503

Query: 599 ALCRGILPTTITWHILVRAV 618
            L +GI P  +T++ ++R +
Sbjct: 504 MLEKGITPGVVTYNAILRGL 523



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 148/351 (42%), Gaps = 73/351 (20%)

Query: 98  RMNEIF--GCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           R+NE F  G     LC+  +   A R +  + +KG  P V SY ++I+GL K G  + A 
Sbjct: 298 RVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAY 357

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV------------------ 197
            + +E    G   +   Y +L++   +  D  +A+E+ + ++                  
Sbjct: 358 QLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRAL 417

Query: 198 ----------------METSVYPNVVTYNVMINGLCKCGRFDECLEMW-DRMKKNEREKD 240
                           ++T+  P+V+T N +ING CK GR +E L++  D M       D
Sbjct: 418 CLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPD 477

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM------------------ 282
           + T+ S I GL   G  + A  +  +M+E GI    VTYNA+                  
Sbjct: 478 AVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFD 537

Query: 283 -----------------IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENG 324
                            ++G C +G+I    + W EV+      +   Y  +++GL  +G
Sbjct: 538 EMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSG 597

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
            ++EAI     L +   N +  ++ ++I+  C  G   +A QI  E+++ G
Sbjct: 598 HLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNG 648



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  ++ +++I+GLC   RF EA+  +   L     PD  T ++L+  L  SK     
Sbjct: 80  GYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRT 139

Query: 488 LKLCCQFLQ--KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           L +  + ++    F P +  YN LI   CS      A ++  +M  R   P++V+Y TL+
Sbjct: 140 LNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLV 199

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +G  K G+   A ++++ + E  + P+ +SY++ ++G+
Sbjct: 200 NGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGV 237



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 475 INGLC-QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           I+ LC + + +D AL+L      +G+ PD    + +IHGLC A +  +A Q         
Sbjct: 56  IHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSL 115

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE--ERLRPDIISYNITLKGLCSCSRMSD 591
           CVP+  T N L+  L  + D  + L + + ++E      P +I+YN  +   CS S  + 
Sbjct: 116 CVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNV 175

Query: 592 AFEFLNDALCRGILPTTITWHILV 615
           A   L D + RG  P+ +++  LV
Sbjct: 176 AHRMLYDMINRGHCPSIVSYTTLV 199


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 226/449 (50%), Gaps = 23/449 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC + +  +A   +N +  KGL  DV +YGT++NG+ K GD   AL +  +M E  ++ +
Sbjct: 20  LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 79

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +ID   K G +  A+ ++  + +E  + PNV TYN MI+G C  GR+ +   + 
Sbjct: 80  VVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 138

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M + E   D  T+ + I    K G +  AE++  EM+   IF D VTYN+MI GFC+ 
Sbjct: 139 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 198

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +  +   ++++M      +VV++N +I       +VDE + +   +  +   A++TT+ 
Sbjct: 199 NRFDDAKHMFDLMASP---DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 255

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G C+   LN A  +  E                  M  HG   +  TCN L+ GF 
Sbjct: 256 TLIHGFCEVDNLNAAQDLFQE------------------MISHGVCPDTITCNILLYGFC 297

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  KLE A+ LF+ +         V+YN +I+G+CK  +  EA+     +   G +PD+ 
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 357

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+++I+G C    I  A  L  +    G  PD + YN LI G   AG+++ +++L S M
Sbjct: 358 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 417

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           +      +  T   + D L   G  DK+ 
Sbjct: 418 RSNGFSGDAFTIKMVAD-LITDGRLDKSF 445



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 237/470 (50%), Gaps = 27/470 (5%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + E GL P V ++ T+INGL   G +L A A+ ++M  +G+  +VV Y  +++G  K GD
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              A  +  ++  ET + P+VV Y+ +I+ LCK G   +   ++  M +     + FTY 
Sbjct: 61  TKSALNLLSKM-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 119

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
             I G C  G    A+R+ R+M+E  I  D +T+NA+I    + GK+ E  +L + M  +
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 306 GCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            C+  + V+YN +I G  ++ + D+A  +++L+     + D  T   +I+  C+   +++
Sbjct: 180 -CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE 234

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
            +Q+L E+                   + G   N  T N+L++GF +   L  A  LF+E
Sbjct: 235 GMQLLREIS------------------RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 276

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G  P  ++ N L+ G C+ E+  EA    + +       D + Y+++I+G+C+  K
Sbjct: 277 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 336

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           +D A  L C     G  PDV  YN++I G C    + DA  L+  MK     P+  TYNT
Sbjct: 337 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 396

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           L+ G  K G+ DK++E+ + +       D  +  + +  L +  R+  +F
Sbjct: 397 LIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM-VADLITDGRLDKSF 445



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 25/428 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++E  + P V+T+N +INGLC  GR  E   + ++M       D  TY + ++G+CK G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            + A  +  +M E+ I  D V Y+A+ID  C+ G   +   L+  M  KG   NV +YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I G    G+  +A  +   + E+  N D  T   LI+   K                  
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK------------------ 162

Query: 376 EGRLADAASLVNRMDKHGCKL-NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
           EG+L +A  L + M  H C   +  T NS++ GF + ++ ++A  +F  M+    SP VV
Sbjct: 163 EGKLFEAEKLCDEM-LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVV 217

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           ++NT+I+  C+ +R  E    ++E+  +G   +  TY+ LI+G C+   ++ A  L  + 
Sbjct: 218 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 277

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           +  G  PD    NIL++G C   K+E+AL+L+  ++      + V YN ++ G+ K    
Sbjct: 278 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 337

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D+A +++  +    + PD+ +YN+ + G C  S +SDA    +     G  P   T++ L
Sbjct: 338 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 397

Query: 615 VRAVMNNG 622
           +R  +  G
Sbjct: 398 IRGCLKAG 405



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 24/401 (5%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     +C+    + A   L+ + E  +KPDV  Y  +I+ L K G    A  +F EM 
Sbjct: 48  YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 107

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E+G+  NV  YN +IDGF   G +  A+ +  R ++E  + P+V+T+N +I+   K G+ 
Sbjct: 108 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL-RDMIEREINPDVLTFNALISASVKEGKL 166

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  ++ D M       D+ TY S I+G CK    + A+ ++  M       D VT+N +
Sbjct: 167 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTI 222

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           ID +CRA ++ E  +L   + R+G + N  +YN LI G  E   ++ A  +++ +     
Sbjct: 223 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 282

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D+ T  +L+ G C+N  L +A+++   ++             ++++D     L+    
Sbjct: 283 CPDTITCNILLYGFCENEKLEEALELFEVIQ-------------MSKID-----LDTVAY 324

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N +++G  + SK++ A  LF  +   G  P V +YN +I+G C      +A     +M +
Sbjct: 325 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 384

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            G +PD  TY+ LI G  ++ +ID +++L  +    GF+ D
Sbjct: 385 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 265/571 (46%), Gaps = 58/571 (10%)

Query: 110 LCR-KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER--GV 166
           LC  KR  +     L+ + E G++PD  SY TV+  L +      AL +   M ++  G 
Sbjct: 164 LCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGC 223

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             NVV YN +I GFF++G+  +A  ++  + M+  V P+VVTY+  I+ LCK    D+  
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEM-MQQGVVPDVVTYSSYIDALCKARAMDKAE 282

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +  +M  N  E D  TY   IHG    G  +    ++REM   G+  D  T N+ +   
Sbjct: 283 LVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSL 342

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ GK KE  E ++ M  KG   ++V+Y++L+ G    G V + ++++  +      AD 
Sbjct: 343 CKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADH 402

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
           + + +LI+   K G +++A+ I  +++E G                  GRLADA    N+
Sbjct: 403 SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS-PTVVSYNTLINGLCK-- 445
           M   G K +    NSL+ GF     L  A  L  EM  +G   P  V +N++IN LCK  
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 446 ---------------------------------VERFGEAYSFVKEMLEKGWKPDMITYS 472
                                            V +  +A+  +  M+  G +PD++TYS
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L++G C++ +ID  L L  + L KG  P    Y I++HGL + G+   A ++   M + 
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               ++ T   ++ GL +    D+A+ ++  +    ++ +I   N  +  +    +  +A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E  +     G++P   T+ +++  ++  G+
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGS 733



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 266/569 (46%), Gaps = 57/569 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEK--GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           LC   + ++A   L+++ +K  G  P+V SY TVI+G  + G++  A  +F EM ++GV 
Sbjct: 200 LCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVV 259

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV Y+  ID   K    M   E+  R ++     P+ VTYN MI+G    G++ E   
Sbjct: 260 PDVVTYSSYIDALCK-ARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAG 318

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M+  M +     D FT  S++  LCK G  + A   +  M   G   D VTY+ ++ G+ 
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYA 378

Query: 288 RAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G + +   L+  M   G +   S YNILI    + G +DEA+ I+  ++E+    D+ 
Sbjct: 379 AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438

Query: 347 THGV-----------------------------------LINGLCKNGYLNKAIQILNEV 371
           T+G                                    LI G C +G L KA ++++E+
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 372 EEGG------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
              G                  EGR+ +A  + + +   G + +  T NSL++G+    K
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E A  +   M   G  P VV+Y+ L++G C+  R  +     +EML KG KP  ITY +
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           +++GL    +   A K+C + ++ G T D++   I++ GLC     ++A+ L+  +   N
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              N+   NT++D ++K    ++A E+++ I    L P+  +Y + +  L     + +A 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
              +     G  P++   + ++R ++  G
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKG 767



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 250/529 (47%), Gaps = 57/529 (10%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF--FKKGD----- 185
           P V +Y  +++   ++       A+F    + G++T+V+  NIL+      K+ D     
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 186 -----------------------------YMRAKEIWERLVMET-SVYPNVVTYNVMING 215
                                          RA ++   +V ++    PNVV+YN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
             + G   +   ++  M +     D  TY S+I  LCKA  ++ AE V R+M+ +G   D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            VTYN MI G+   G+ KE   ++  M R+G + ++ + N  +  L ++GK  EA   ++
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  K    D  T+ VL++G    GY+   + + N +E  G G +AD +           
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSME--GNGIVADHS----------- 403

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
                  N L++ + +   ++ A+ +F +M  +G  P   +Y T+I    ++ R  +A  
Sbjct: 404 -----VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT-PDVTMYNILIHGL 513
              +M+  G KPD I Y+ LI G C    +  A +L  + + +G   P+   +N +I+ L
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G+V +A  ++  +      P+++T+N+L+DG    G  +KA  + + ++   + PD+
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++Y+  L G C   R+ D      + L +G+ PTTIT+ I++  + N+G
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDG 627



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/586 (23%), Positives = 249/586 (42%), Gaps = 101/586 (17%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRM-NEIFGCEAGILC---------RKRQFEKAK 120
           P+ ++ S V+++  ++S   +ALD+   M  +  GC   ++          R+ +  KA 
Sbjct: 188 PDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKAC 247

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              + + ++G+ PDV +Y + I+ L K+  +  A  V  +M   G E + V YN +I G+
Sbjct: 248 NLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGY 307

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
              G +     ++ R +    + P++ T N  ++ LCK G+  E  E +D M     + D
Sbjct: 308 SILGQWKETAGMF-REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPD 366

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   +HG    G V     ++  M  +GI  D   YN +ID + + G + E   ++ 
Sbjct: 367 LVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFT 426

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G + +  +Y  +I      G++ +A+  +  +       D+  +  LI G C +G
Sbjct: 427 QMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHG 486

Query: 360 YLNKAIQILNEVEEGG------------------EGR----------------------- 378
            L KA ++++E+   G                  EGR                       
Sbjct: 487 NLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITF 546

Query: 379 --LADAASLVNRMDKH----------GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
             L D   LV +M+K           G + +  T ++L++G+ +  ++++ + LF+EM  
Sbjct: 547 NSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLS 606

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS----- 481
           KG  PT ++Y  +++GL    R   A     EM+E G   D+ T  +++ GLC++     
Sbjct: 607 KGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDE 666

Query: 482 ------------------------------KKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                                         +K + A +L       G  P+ + Y ++I 
Sbjct: 667 AIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMIT 726

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            L   G VE+A  ++S M+K  C P+    N ++  L + G+  KA
Sbjct: 727 NLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 220/512 (42%), Gaps = 51/512 (9%)

Query: 21  ALALFDSATREPGYAHSPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           A   FDS   +    H P L  +  +L        VV +  +   +E         V   
Sbjct: 351 AAEFFDSMAAK---GHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +I AYGK  M D+A+ +F +M E                           +G+ PD ++Y
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQE---------------------------RGVMPDAWTY 440

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           GTVI    + G L  A+  F++M   G++ + + YN LI GF   G+ ++AKE+   ++ 
Sbjct: 441 GTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                PN V +N +IN LCK GR  E  +++D +       D  T+ S I G    G +E
Sbjct: 501 RGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKME 560

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A  V   M+  GI  D VTY+A++DG+CR G+I +   L+  M  KG     ++Y I++
Sbjct: 561 KAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIIL 620

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL  +G+   A  +   + E     D +T G+++ GLC+N   ++AI            
Sbjct: 621 HGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI------------ 668

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                 +L  ++     K N    N++++   +  K E A  LF  +S  G  P   +Y 
Sbjct: 669 ------ALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYG 722

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I  L K     EA +    M + G  P     + +I  L +  +I  A     +   K
Sbjct: 723 VMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGK 782

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             + + +  ++++      GK  + ++    M
Sbjct: 783 TISLEASTASLMLSLFSRKGKYREQIKSLPAM 814



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 186/400 (46%), Gaps = 56/400 (14%)

Query: 262 RVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
           R+ RE     + +  V TYN ++D  CRA +    F L+    + G   +V+  NIL++ 
Sbjct: 104 RICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKC 163

Query: 320 LLENGKVDEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEG 377
           L    + D+A+++    + E     D+ ++  ++  LC++    +A+ +L+  V++ G  
Sbjct: 164 LCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSG-- 221

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                          GC  N  + N++++GF +  ++  A  LF EM ++G  P VV+Y+
Sbjct: 222 ---------------GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYS 266

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING-------------------- 477
           + I+ LCK     +A   +++M+  G++PD +TY+ +I+G                    
Sbjct: 267 SYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR 326

Query: 478 ---------------LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
                          LC+  K   A +       KG  PD+  Y++L+HG  + G V D 
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           L L+++M+    V +   YN L+D   K G  D+A+ I+  + E  + PD  +Y   +  
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                R++DA +  N  +  G+ P TI ++ L++    +G
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHG 486



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 3/228 (1%)

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS-FVKE 458
           T N LM+   +A +      LF    + G    V+  N L+  LC  +R  +A +  +  
Sbjct: 121 TYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHR 180

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK--GFTPDVTMYNILIHGLCSA 516
           M E G +PD I+YS ++  LC+  +   AL L    ++K  G +P+V  YN +IHG    
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G+V  A  L+  M ++  VP++VTY++ +D L K    DKA  +   ++     PD ++Y
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           N  + G     +  +      +   RG++P   T +  + ++  +G S
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 230/494 (46%), Gaps = 24/494 (4%)

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMF---ERGVETNVVCYNILIDGFFKKGDYMRAK 190
           D  SY TV+  L + G    A A+   M          N V Y +L+       D +  +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC--ADRLADQ 133

Query: 191 EI-WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            +   R +    V  +VVTY  +I GLC     D+ +E+   M ++  E +   Y S + 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G CK+G  E   +V+ EM E GI  D V Y  +ID  C+ GK K+   + ++M R+G   
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+YN+LI  + + G V EAI + + + EK    D  T+  LI GL     +++A+ +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            E+  G                K+  K N  T NS++ G     ++  A  +   M   G
Sbjct: 314 EEMVRG----------------KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C   +V+YN LI GL +V +  +A   + EM   G +PD  TYS+LI G C+  ++D A 
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L      +G  P++  Y  L+  +C  G +E A  L++ M   N   ++V Y+T++ G 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGA 476

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD   A E+   I++E L PD ++Y+I +        M  A   L      G LP  
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 609 ITWHILVRAVMNNG 622
             +  L++     G
Sbjct: 537 AVFDSLIQGYSTKG 550



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 244/500 (48%), Gaps = 32/500 (6%)

Query: 72  PEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
           P  V+ +V+ +A   + + D+A+ + + M           +G     LC   + +KA   
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  + E G++P+V  Y +++ G  KSG       VF EM E+G+E +VV Y  LID   K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G   +A  + + +V    + PNVVTYNV+IN +CK G   E + +  +M +     D  
Sbjct: 233 VGKAKKAHGVMDMMV-RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELWE 300
           TY + I GL     ++ A  +  EMV     V  + VT+N++I G C  G++++ F++  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M   GC+ N+V+YN+LI GLL   KV +A+ + + +       DS T+ +LI G CK  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +++A                    L++ M   G +   +    L+    +   +E A  
Sbjct: 412 QVDRA------------------EDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARN 453

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF EM        VV+Y+T+I+G CK      A   +K ++++G  PD +TYS++IN   
Sbjct: 454 LFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +S  ++ A  +  Q    GF PDV +++ LI G  + G++   L+L   M  +N   +  
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572

Query: 540 TYNTLMDGLFKTGDCDKALE 559
             +TL   L  + +    L+
Sbjct: 573 IISTLSTSLVASNEGKALLQ 592



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 232/503 (46%), Gaps = 59/503 (11%)

Query: 110 LCRKRQFEKAKRFLNSLW---EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           LCR+   ++A   L ++        +P+  SY  ++  L        A+ +   M   GV
Sbjct: 87  LCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGV 146

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV Y  LI G     +  +A E+   +  E+ + PNVV Y+ ++ G CK GR+++  
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMC-ESGIEPNVVVYSSLLQGYCKSGRWEDVG 205

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +++  M +   E D   Y   I  LCK G  + A  V   MV  G+  + VTYN +I+  
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE-LLREKN-CNA 343
           C+ G +KE   + + M  KG   +VV+YN LI+GL +  ++DEA+ + E ++R KN    
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T   +I GLC  G + +A Q+   +EE                   GC +N  T N 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEE------------------TGCMVNLVTYNL 367

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L+ G ++  K+  A+ L  EM+  G  P   +Y+ LI G CK+ +   A   +  M ++G
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 464 WKP----------------------------------DMITYSLLINGLCQSKKIDMALK 489
            +P                                  D++ YS +I+G C++  +  A +
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L    + +G TPD   Y+I+I+    +G +E A  +   M     +P++  +++L+ G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 550 KTGDCDKALEIWNHILEERLRPD 572
             G+ +K LE+   ++ + +  D
Sbjct: 548 TKGEINKVLELIREMITKNIALD 570



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 431 PTV---VSYNTLINGLCKVERFGEAYSFVKEM-LEK--GWKPDMITYSLLINGLCQSKKI 484
           P+V   VSYNT++  LC+      A + ++ M LE     +P+ ++Y++L+  LC  +  
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+ L       G   DV  Y  LI GLC A +V+ A++L   M +    PN+V Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           + G  K+G  +   +++  + E+ + PD++ Y   +  LC   +   A   ++  + RG+
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 605 LPTTITWHILVRAVMNNGA 623
            P  +T+++L+  +   G+
Sbjct: 252 EPNVVTYNVLINCMCKEGS 270


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 265/532 (49%), Gaps = 52/532 (9%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P  Y++  +I+ L +S     AL +F++M ++G   N     IL+ G  + G   +A E+
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
                  +    N V YN +++  C+    +E   + +RM +     D  T+ S I  LC
Sbjct: 208 VNN--NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265

Query: 253 KAGNVEGAERVYREM---VESGI-FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +AG V  A R++R+M    E G+   + VT+N M+ GFC+ G + +   L E M + G  
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325

Query: 309 NVVS-YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           + +  YNI + GLL NG++ EA  + + +  K    ++ T+ ++++GLC+N  L+ A  +
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385

Query: 368 LNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           ++ +   G                  G++ +A S+++ M ++GC+ N YTCN+L++   +
Sbjct: 386 MDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWK 445

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM-------LEKG 463
             +   A  + ++M+ K   P  V+ N ++NGLC+     +A   V EM       L+KG
Sbjct: 446 EGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKG 505

Query: 464 WK---------------PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
                            PD ITY+ LINGLC+  +++ A K   + L K   PD   Y+ 
Sbjct: 506 NSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDT 565

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW---NHIL 565
            I   C  GK+  A ++  +M++  C   L TYN L+ GL   G  ++  EI+   + + 
Sbjct: 566 FIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGL---GSNNQIFEIYGLKDEMK 622

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           E+ + PDI +YN  +  LC   +  DA   L++ L +GI P   ++ IL++A
Sbjct: 623 EKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKA 674



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 159/620 (25%), Positives = 288/620 (46%), Gaps = 53/620 (8%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQAYGKNSMPDKAL 93
           A   + F+ ++  L + +   H  ++ E +  + C CP +  L + ++   +  +  +AL
Sbjct: 147 APQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGC-CPNEFTLGILVRGLCRAGLVKQAL 205

Query: 94  DVFQRMNE-------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           ++    N        ++       CR+    +A+R +  + E G+ PDV ++ + I+ L 
Sbjct: 206 ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265

Query: 147 KSGDLLGALAVFDEM---FERGV-ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           ++G ++ A  +F +M    E G+   NVV +N+++ GF K G    A+ + E +  +   
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETM-KKVGN 324

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           + ++  YN+ + GL + G   E   + D M     E +++TY   + GLC+   +  A  
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           +   M+ +G++ D V Y+ ++ G+C  GK+ E   +   M R GC  N  + N L+  L 
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G+  EA  + + + EK    D+ T  +++NGLC+NG L+KA +I++E+   G   L  
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 382 A---ASLVNRM-DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
               ASL+N + +   C  +  T  +L+NG  +  +LE A   F EM  K   P  V+Y+
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           T I   CK  +   A+  +K+M   G    + TY+ LI GL  + +I     L  +  +K
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD---- 553
           G +PD+  YN +I  LC  GK +DA+ L   M  +   PN+ ++  L+    K+ D    
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVA 684

Query: 554 ----------CDKALEIWNHILEERLRPDIIS--------------------YNITLKGL 583
                     C +   +++ +  E L    +S                    Y   +  L
Sbjct: 685 CELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARL 744

Query: 584 CSCSRMSDAFEFLNDALCRG 603
           C   R++DA   L   + +G
Sbjct: 745 CQDERLADANSLLYKLIDKG 764



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 260/583 (44%), Gaps = 91/583 (15%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLW-- 127
           +++  + +  M ++A  + +RMNE+        F      LCR  +  +A R    +   
Sbjct: 224 TLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMD 283

Query: 128 -EKGL-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
            E GL +P+V ++  ++ G  K G +  A  + + M + G   ++ CYNI + G  + G+
Sbjct: 284 AELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGE 343

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
            + A+ + + +V +  + PN  TYN+M++GLC+     +   + D M +N    D+  Y 
Sbjct: 344 LLEARLVLDEMVAK-GIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYS 402

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + +HG C  G V  A+ V  EM+ +G   +  T N ++    + G+  E  E+ + M  K
Sbjct: 403 TLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEK 462

Query: 306 GCL--NVVSYNILIRGLLENGKVDEAISI----W------------------ELLREKNC 341
            C   + V+ NI++ GL  NG++D+A  I    W                   +    NC
Sbjct: 463 -CYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNC 521

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             D  T+  LINGLCK G L +A +   E+                     +G+++ A  
Sbjct: 522 LPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFR 581

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           ++  M+++GC     T N+L+ G    +++     L  EM  KG SP + +YN +I  LC
Sbjct: 582 VLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLC 641

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI-------DMALKLCCQ---- 493
           +  +  +A S + EML+KG  P++ ++ +LI    +S          ++AL +C +    
Sbjct: 642 EGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL 701

Query: 494 -----------------------FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
                                   L +  T    MY  LI  LC   ++ DA  L   + 
Sbjct: 702 YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI 761

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL--RP 571
            +    +  ++  ++DGL K G+  +A E+   ++E  L  RP
Sbjct: 762 DKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRP 804



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 222/474 (46%), Gaps = 44/474 (9%)

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           ++ +M    V      +N+LI    +   +  A +++E++  +    PN  T  +++ GL
Sbjct: 137 LYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMP-QKGCCPNEFTLGILVRGL 195

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G   + LE+ +    + R  +   Y + +   C+      AER+   M E G+  D 
Sbjct: 196 CRAGLVKQALELVNN-NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDV 254

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-----NVVSYNILIRGLLENGKVDEAIS 331
           VT+N+ I   CRAGK+ E   ++  M     L     NVV++N++++G  ++G + +A  
Sbjct: 255 VTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARG 314

Query: 332 IWELLREKNCNADSTT-HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
           + E ++ K  N DS   + + + GL +NG                   L +A  +++ M 
Sbjct: 315 LVETMK-KVGNFDSLECYNIWLMGLLRNG------------------ELLEARLVLDEMV 355

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G + NAYT N +M+G  +   L +A  L   M R G  P  V+Y+TL++G C   +  
Sbjct: 356 AKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVF 415

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA S + EM+  G +P+  T + L++ L +  +   A ++  +  +K + PD    NI++
Sbjct: 416 EAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVV 475

Query: 511 HGLCSAGKVEDALQLYSNM--KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +GLC  G+++ A ++ S M       +    ++ +L++ +    +C              
Sbjct: 476 NGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNC-------------- 521

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             PD I+Y   + GLC   R+ +A +   + L + + P ++T+   + +    G
Sbjct: 522 -LPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQG 574



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 509 LIHGLCSAGKVEDALQLYSNMKKR--NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           ++  L   G V+DA+  + +++ +  +  P+L  YN L+    +         +++ +L 
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+ P   ++N+ +  LC       A +       +G  P   T  ILVR +   G
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAG 199


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 271/571 (47%), Gaps = 31/571 (5%)

Query: 80   IQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGL 131
            I  YGK+    KA+  ++ M       ++    A +  L +  +   AKR  + L   G+
Sbjct: 433  INYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492

Query: 132  KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             PD  +Y  +I    K+ +   A+ VF EM E     +V+  N LID  +K G   R  E
Sbjct: 493  CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG---RGNE 549

Query: 192  IWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             W+    + E ++ P   TYN ++ GL + G+  E + + + M  N    +  TY + + 
Sbjct: 550  AWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLD 609

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
             LCK G V  A  +   M   G   D  +YN  + G  +  ++ E F ++  M +    +
Sbjct: 610  CLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPD 669

Query: 310  VVSYNILIRGLLENGKVDEAI-SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
              +   ++   ++NG ++EA+ ++ E + +    AD ++   L+ G+ K   + K+I+  
Sbjct: 670  YTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFA 729

Query: 369  NEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
              +                       +  +A  LV + +  G  L   + N+L+ G +  
Sbjct: 730  ENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDE 789

Query: 412  SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            + ++ A  LF EM R GC P   +YN +++ + K  R  +     KEM  KG++   +TY
Sbjct: 790  NLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTY 849

Query: 472  SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            + +I+GL +SK +  A+ L  + + +GF+P    Y  L+ GL   GK+EDA  L+  M  
Sbjct: 850  NTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLD 909

Query: 532  RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
              C PN   YN L++G    G+ +K  E++ +++++ + PDI SY + +  LC+  R++D
Sbjct: 910  YGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLND 969

Query: 592  AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +  +       G+ P  IT+++L+  +  +G
Sbjct: 970  SLSYFRQLTELGLEPDLITYNLLIHGLGRSG 1000



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 284/618 (45%), Gaps = 51/618 (8%)

Query: 5   AKRLLNLLK-AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           A+ ++++L+ A  +P  AL LF S  ++P   H+    +++L  +     V  ++++ +L
Sbjct: 78  AQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDL 137

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFL 123
           ++ Q           +++A          +  F  +    G E G+         A   L
Sbjct: 138 MQRQ-----------IVKA---------NVGTFLTIFRSLGMEGGL-------RSAPVAL 170

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
             + E G+  + Y+Y  +I  LVKSG    A+ V+  M   G+  +V  Y++L+  F K+
Sbjct: 171 PMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR 230

Query: 184 GDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                   +W    ME   V PNV +Y + I  L + GRF+E  ++  +M+    + D  
Sbjct: 231 D---VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVV 287

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           T    I  LC AG V  A+ V+ +M  S    D VTY  ++D     G  +   E+W  M
Sbjct: 288 TNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAM 347

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G   NVV+Y  ++  L + G+VDEA  +++ +++K       ++  LI+G  K   L
Sbjct: 348 KADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRL 407

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           N A++                  L N M+ HG   N YT    +N + ++ +   AI  +
Sbjct: 408 NHALE------------------LFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRY 449

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M  KG  P VV+ N ++  L K  R G A     E+   G  PD ITY+++I    ++
Sbjct: 450 ELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKA 509

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
              D A+K+  + ++    PDV   N LI  L  AG+  +A +++  +K+ N  P   TY
Sbjct: 510 SNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTY 569

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ GL + G   + + +   +      P++I+YN  L  LC    ++ A   L +   
Sbjct: 570 NTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTM 629

Query: 602 RGILPTTITWHILVRAVM 619
           +G +P   +++  +  ++
Sbjct: 630 KGCMPDLSSYNTALHGLV 647



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 275/604 (45%), Gaps = 65/604 (10%)

Query: 71   CPEDVALSV-IQAYGKNSMPDKALDVFQRMNEIFGCEAGILC---------RKRQFEKAK 120
            CP+++  ++ I+   K S  D+A+ VF  M E   C   +L          +  +  +A 
Sbjct: 493  CPDNITYTMMIKCCSKASNADEAMKVFSEMIETR-CVPDVLAVNSLIDTLYKAGRGNEAW 551

Query: 121  RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
            +  + L E  L P   +Y T++ GL + G +   + + +EM       N++ YN ++D  
Sbjct: 552  KIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCL 611

Query: 181  FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK------ 234
             K G+   A  +   + M+  + P++ +YN  ++GL K  R  E   ++ +MKK      
Sbjct: 612  CKNGEVNYALGMLYNMTMKGCM-PDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDY 670

Query: 235  ----------------NE-------------REKDSFTYCSFIHGLCKAGNVEGAERVYR 265
                            NE              + D  ++ S + G+ K   +E +     
Sbjct: 671  TTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAE 730

Query: 266  EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG 324
             +  S I +D    + +I   C++ K  E  EL +     G  L   SYN LI GL++  
Sbjct: 731  NIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDEN 790

Query: 325  KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE-EGGEGR----- 378
             +D A  ++  ++   C+ D  T+ ++++ + K+  +   +++  E+  +G E       
Sbjct: 791  LIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYN 850

Query: 379  -----------LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                       L +A  L  ++   G      T   L++G ++  K+E+A  LF EM   
Sbjct: 851  TIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDY 910

Query: 428  GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            GC P    YN L+NG        +     + M+++G  PD+ +Y++LI  LC + +++ +
Sbjct: 911  GCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDS 970

Query: 488  LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            L    Q  + G  PD+  YN+LIHGL  +G++E+A+ L+++M+K    PNL TYN+L+  
Sbjct: 971  LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILY 1030

Query: 548  LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
            L K G   +A +++  +L+   +P++ +YN  + G        +AF      +  G  P 
Sbjct: 1031 LGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPN 1090

Query: 608  TITW 611
            + T+
Sbjct: 1091 SSTY 1094



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 237/496 (47%), Gaps = 27/496 (5%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +K +V ++ T+   L   G L  A      M E G+  N   YN LI    K G    A 
Sbjct: 143 VKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAM 202

Query: 191 EIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMW--DRMKKNEREKDSFTYCSF 247
           E+++  VM T  + P+V TY+V+   +   G+ D    +W    M+ +  + + ++Y   
Sbjct: 203 EVYK--VMATDGIVPSVRTYSVL---MLAFGKRDVETVVWLLREMEDHGVKPNVYSYTIC 257

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKG 306
           I  L +AG  E A ++ ++M + G   D VT   +I   C AG++ +  ++ W++     
Sbjct: 258 IRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQ 317

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             + V+Y  L+    +NG     I IW  ++    N +   +  +++ LC+         
Sbjct: 318 KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQ--------- 368

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                     GR+ +A+ + ++M + G +   Y+ NSL++GF++A +L +A+ LF  M+ 
Sbjct: 369 ---------VGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNI 419

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G +P   +Y   IN   K     +A    + M  KG  PD++  + ++  L +S ++ M
Sbjct: 420 HGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGM 479

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A ++  +    G  PD   Y ++I     A   ++A++++S M +  CVP+++  N+L+D
Sbjct: 480 AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLID 539

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L+K G  ++A +I++ + E  L P   +YN  L GL    ++ +    L +       P
Sbjct: 540 TLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPP 599

Query: 607 TTITWHILVRAVMNNG 622
             IT++ ++  +  NG
Sbjct: 600 NLITYNTVLDCLCKNG 615



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 229/526 (43%), Gaps = 62/526 (11%)

Query: 77   LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
            + +++    NS P   +      N +  C    LC+  +   A   L ++  KG  PD+ 
Sbjct: 586  MHLLEEMNSNSYPPNLITY----NTVLDC----LCKNGEVNYALGMLYNMTMKGCMPDLS 637

Query: 137  SYGTVINGLVKSGDLLGALAVFDEM----------------------------------- 161
            SY T ++GLVK   L  A  +F +M                                   
Sbjct: 638  SYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYI 697

Query: 162  FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             + G + +   ++ L++G  K+    ++ E  E + + + +  +    + +I  LCK  +
Sbjct: 698  LQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIAL-SRILLDDFFLSPLIRHLCKSKK 756

Query: 222  FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
              E  E+  + +       + +Y + I GL     ++ AE ++ EM   G   D  TYN 
Sbjct: 757  ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNL 816

Query: 282  MIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKN 340
            ++D   ++ +I++  ++ + M  KG  +  V+YN +I GL+++  + EA+ ++  L  + 
Sbjct: 817  ILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEG 876

Query: 341  CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAA 383
             +    T+G L++GL K+G +  A  + +E+ + G                  G      
Sbjct: 877  FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVC 936

Query: 384  SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
             L   M   G   +  +   L+     A +L +++  F++++  G  P +++YN LI+GL
Sbjct: 937  ELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996

Query: 444  CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
             +  R  EA S   +M + G  P++ TY+ LI  L +  K   A K+  + L+ G+ P+V
Sbjct: 997  GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNV 1056

Query: 504  TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              YN LI G   +G  ++A   Y  M    C PN  TY  L + L 
Sbjct: 1057 FTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQLL 1102


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 276/596 (46%), Gaps = 34/596 (5%)

Query: 58  SRILELIEIQKCYCPEDVALS---VIQAYGKNSMPDKALDVFQRMN------EIFGCEAG 108
           +R LEL      + P     +    I  +GK+    KAL  ++ M       ++    A 
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457

Query: 109 I--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           +  L +  +   AKR  + L   G+ PD  +Y  +I    K+ +   A+ +F EM E   
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDE 224
             +V+  N LID  +K G   R  E W+    + E ++ P   TYN ++ GL + G+  E
Sbjct: 518 APDVLAMNSLIDMLYKAG---RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            +++ + M  N    +  TY + +  LCK G V  A  +   M  +G   D  +YN ++ 
Sbjct: 575 VMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMY 634

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI-SIWELLREKNCNA 343
           G  +  ++ E F ++  M +    +  +   ++   + +G + EA+ ++ E + + +   
Sbjct: 635 GLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D ++   L+ G+ K     K+I+    +   G                       A  LV
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELV 754

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
            + +  G  L   + N+L+ G +    ++ A  LF EM R GC P   +Y+ +++ + K 
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R  +     +EM  KG+K   +TY+ +I+GL +SK +D A+ L  Q + +GF+P    Y
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L+ GL   G +EDA  L+  M +  C PN   YN L++G    GD +K  E++  ++E
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + PDI SY + +  LC+  R++D   +       G+ P  IT+++L+  +  +G
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSG 990



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 275/606 (45%), Gaps = 53/606 (8%)

Query: 14  AEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE 73
           A  +P  AL LF S  R+P   H+    +++L  +     V  V+++ +L++ Q      
Sbjct: 77  AAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQ------ 130

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
                +I+A          +  F  +    G E G+         A   L  + E G+  
Sbjct: 131 -----IIKA---------NVGTFCTVFGAVGVEGGL-------RSAPVALPVMKEAGIVL 169

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           + Y+Y  +I  LVKSG    A+ V+  M   GV   V  Y++L+  F K+    R  E  
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKR----RDAETV 225

Query: 194 ERLVMET---SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
             L+ E     V PNV +Y + I  L + GR +E   +  +M++   + D  T    I  
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           LC AG +  A+ V+ +M  S    D VTY  ++D    +G  +   E+W  +   G   N
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VVSY   +  L + G+VDEA+ +++ +++K       ++  LI+G  K    N+A++   
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALE--- 402

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                          L N M+ HG   N YT    +N   ++ +   A+  ++ M  KG 
Sbjct: 403 ---------------LFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGI 447

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P VV+ N ++ GL K  R G A     E+   G  PD ITY+++I    ++   D A+K
Sbjct: 448 VPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMK 507

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + ++    PDV   N LI  L  AG+  +A +++  +K+ N  P   TYNTL+ GL 
Sbjct: 508 IFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLG 567

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           + G   + +++   +      P+II+YN  L  LC    ++ A + L      G +P   
Sbjct: 568 REGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627

Query: 610 TWHILV 615
           +++ ++
Sbjct: 628 SYNTVM 633



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/603 (24%), Positives = 270/603 (44%), Gaps = 65/603 (10%)

Query: 72   PEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
            P+++  ++ I+   K S  D+A+ +F  M E               +L +  +  +A + 
Sbjct: 484  PDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKI 543

Query: 123  LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
               L E  L+P   +Y T++ GL + G +   + + + M       N++ YN ++D   K
Sbjct: 544  FYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCK 603

Query: 183  KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             G+   A ++   + M   + P++ +YN ++ GL K  R DE   M+ +MKK     D  
Sbjct: 604  NGEVNYALDMLYSMTMNGCM-PDLSSYNTVMYGLVKEDRLDEAFWMFCQMKK-VLAPDYA 661

Query: 243  TYCSFIHGLCKAGNVEGAERVYREMV---------------------------------- 268
            T C+ +    ++G ++ A    RE +                                  
Sbjct: 662  TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAEN 721

Query: 269  --ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGK 325
               SG+ +D +  + +I   C+  +     EL +     G  L   SYN LI GL++   
Sbjct: 722  IASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781

Query: 326  VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------- 375
            +D A  ++  ++   C+ D  T+ ++++ + K+  +   ++I  E+   G          
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 376  -------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                      L +A +L  ++   G      T   L++G ++   +E+A  LF EM   G
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 429  CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            C P    YN L+NG        +     + M+E+G  PD+ +Y+++I+ LC   +++  L
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 489  KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
                Q    G  PD+  YN+LIHGL  +G++E+AL LY++M+K+   PNL TYN+L+  L
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 549  FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             K G   +A +++  +L +  +P++ +YN  ++G        +AF      +  G  P +
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 609  ITW 611
             T+
Sbjct: 1082 STY 1084



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 229/493 (46%), Gaps = 20/493 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +K +V ++ TV   +   G L  A      M E G+  N   YN LI    K G    A 
Sbjct: 132 IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAM 191

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           ++++ +  +  V P V TY+V++    K    +  + +   M+      + ++Y   I  
Sbjct: 192 DVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRV 250

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLN 309
           L +AG +E A R+ R+M E G   D VT   +I   C AG++ +  ++ W++       +
Sbjct: 251 LGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPD 310

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  L+    ++G       IW  L+    N +  ++   ++ LC+ G +++A+ + +
Sbjct: 311 RVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFD 370

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
           E                  M + G     Y+ NSL++GF++A +   A+ LF  M+  G 
Sbjct: 371 E------------------MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGP 412

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P   ++   IN   K     +A    + M  KG  PD++  + ++ GL ++ ++ MA +
Sbjct: 413 TPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  +    G +PD   Y ++I     A   ++A+++++ M +  C P+++  N+L+D L+
Sbjct: 473 VFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLY 532

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  ++A +I+  + E  L P   +YN  L GL    ++ +  + L         P  I
Sbjct: 533 KAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNII 592

Query: 610 TWHILVRAVMNNG 622
           T++ ++  +  NG
Sbjct: 593 TYNTVLDCLCKNG 605



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 215/494 (43%), Gaps = 57/494 (11%)

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
            D   A E++  +  +  V     + N M+  +   GR  +  +++D M++   + +  T
Sbjct: 79  ADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           +C+    +   G +  A      M E+GI ++A TYN +I    ++G  +E  ++++ M 
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 304 RKGCL------------------------------------NVVSYNILIRGLLENGKVD 327
             G +                                    NV SY I IR L + G+++
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA-------------------IQIL 368
           EA  I   + E+ C  D  T+ VLI  LC  G L  A                   I +L
Sbjct: 259 EAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLL 318

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           ++  + G+ R    + + N +   G   N  +  + ++   Q  +++ A+ +F EM +KG
Sbjct: 319 DKCGDSGDSR--SVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   SYN+LI+G  K +RF  A      M   G  P+  T+ L IN   +S +   AL
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           K       KG  PDV   N +++GL   G++  A +++  +K     P+ +TY  ++   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K  + D+A++I+  ++E R  PD+++ N  +  L    R ++A++   +     + PT 
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 609 ITWHILVRAVMNNG 622
            T++ L+  +   G
Sbjct: 557 CTYNTLLAGLGREG 570



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 179/372 (48%), Gaps = 24/372 (6%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+ ++   A   +      G+     SY  +I GLV    +  A  +F EM   G + +
Sbjct: 741  LCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWE-RLVMETSVYPNV-VTYNVMINGLCKCGRFDECLE 227
               Y++++D     G  MR +++ + +  M    Y +  VTYN +I+GL K    DE + 
Sbjct: 801  EFTYHLILDAM---GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 857

Query: 228  MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            ++ ++          TY   + GL K GN+E AE ++ EM+E G   +   YN +++G+ 
Sbjct: 858  LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917

Query: 288  RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             AG  ++  EL+E M  +G   ++ SY ++I  L  +G++++ +S ++ L +     D  
Sbjct: 918  IAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            T+ +LI+GL                  G  GRL +A SL N M+K G   N YT NSL+ 
Sbjct: 978  TYNLLIHGL------------------GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
               +A K   A  +++E+  KG  P V +YN LI G         A++    M+  G +P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079

Query: 467  DMITYSLLINGL 478
            +  TY  L N +
Sbjct: 1080 NSSTYMQLPNQM 1091


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 215/403 (53%), Gaps = 24/403 (5%)

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LID F K G   +A  ++ R++ ++ + P+  T+NV++N   K  R D   ++++ 
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVY-RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE 149

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M+      +  TY   I  +CK G VE A +V+ +M   G   +  TY +MIDG  ++G 
Sbjct: 150 MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH 209

Query: 292 IKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + + F L+E M  +G +   V YN LI GL  +G+ D A  ++  +  K    D  T   
Sbjct: 210 VDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTS 269

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L+ GL   G  ++A +I  E  + G                   RL +A  +   +++ G
Sbjct: 270 LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              + YT N+LM+G  ++ ++ +A  L  +M R GC+P V  YNTLI+GL K  R  EA 
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             + EM   G++PD++TY+ LI+  C+  +I+ AL+L  +   KGF   VT YN +++GL
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVT-YNTILNGL 448

Query: 514 CSAGKVEDALQLYSNMKKRNC----VPNLVTYNTLMDGLFKTG 552
           C AG+V++A +L++ MK+        P+ VTY TL++G  + G
Sbjct: 449 CMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 223/435 (51%), Gaps = 23/435 (5%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +  G    G  ++ +E   RM+ +     +  Y S I    KAG  + A  VYR M +SG
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
           +  D  T+N +++ F +A ++   ++L+E M  + C  NV++Y+ILI  + + G V++A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
            ++  ++ + C  +  T+  +I+GL K+G+++KA  +  E+   G               
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              GR   AA L   M   G + +  T  SL+ G   A +   A  +F+E    GC+  V
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
             YN LI+ LCK +R  EA+    E+ E G  PD+ T++ L++GLC+S +I  A  L   
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G TPDVT+YN LI GL  +G+VE+A QL   M+     P++VTYNTL+D   K G 
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN---DALCRGIL-PTTI 609
            + AL ++  I  +    + ++YN  L GLC   R+ +A++  N        G++ P  +
Sbjct: 420 IEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478

Query: 610 TWHILVRAVMNNGAS 624
           T+  L+      G S
Sbjct: 479 TYTTLLNGARQAGLS 493



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 234/498 (46%), Gaps = 54/498 (10%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKAL 93
           Y   P +F  + R      L+      L+ +E  +C        S+I A+ K     KAL
Sbjct: 50  YILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
            V++ M                            + GL+PD Y++  ++N   K+  +  
Sbjct: 110 AVYRVMG---------------------------QSGLRPDTYTFNVLMNAFKKAKRVDS 142

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVM 212
              +F+EM  +    NV+ Y+ILID   K G   +A +++  L M++    PN+ TY  M
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF--LDMKSRGCRPNIFTYTSM 200

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I+GL K G  D+   +++ M           Y S IHGL ++G  + A +++REM+  G+
Sbjct: 201 IDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGL 260

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             D VT+ +++ G   AG+  E   +++     GC L+V  YN+LI  L ++ ++DEA  
Sbjct: 261 QPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWE 320

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           I+  L E     D  T   L++GLCK+G                  R+ DA  L+  M +
Sbjct: 321 IFGELEEDGLVPDVYTFNALMDGLCKSG------------------RIHDAFILLGDMKR 362

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC  +    N+L++G  ++ ++E A  L  EM   G  P VV+YNTLI+  CK  R  +
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIED 422

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG----FTPDVTMYN 507
           A    +E+  KG+  + +TY+ ++NGLC + ++D A KL     Q+       PD   Y 
Sbjct: 423 ALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYT 481

Query: 508 ILIHGLCSAGKVEDALQL 525
            L++G   AG  E A  L
Sbjct: 482 TLLNGARQAGLSELANSL 499



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 174/359 (48%), Gaps = 25/359 (6%)

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLEN 323
           R +++  IF++      +  G+  AG +++  E  + M G +  L   +YN LI   ++ 
Sbjct: 49  RYILQPRIFIE------LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKA 102

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G   +A++++ ++ +     D+ T  VL+N   K   ++   ++  E             
Sbjct: 103 GYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE------------- 149

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                M    C  N  T + L++   +   +E A+ +F +M  +GC P + +Y ++I+GL
Sbjct: 150 -----MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
            K     +A+   +EM  +G     + Y+ LI+GL +S + D A KL  + L KG  PD 
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             +  L++GL  AG+  +A +++   +   C  ++  YN L+D L K+   D+A EI+  
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE 324

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + E+ L PD+ ++N  + GLC   R+ DAF  L D    G  P    ++ L+  +  +G
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSG 383



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 35/233 (15%)

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYS----------------FVK--------EML 460
           +++G  P+V +  TL+  L    RF EA                  F++         +L
Sbjct: 11  TQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLL 70

Query: 461 EKGWKP-----------DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           EK  +                Y+ LI+   ++     AL +     Q G  PD   +N+L
Sbjct: 71  EKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVL 130

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           ++    A +V+   +L+  M+ +NC PN++TY+ L+D + K G  +KAL+++  +     
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC 190

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           RP+I +Y   + GL     +  AF    +    G++ T + ++ L+  +  +G
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 1/168 (0%)

Query: 452 AYSFVKEM-LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           AY F K +  ++G  P +   + L+  L  +++ + A ++  +  +  +     ++  L 
Sbjct: 2   AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G  SAG +E +++    M+   C      YN+L+D   K G   KAL ++  + +  LR
Sbjct: 62  RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           PD  ++N+ +       R+   ++   +   +   P  IT+ IL+ AV
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 222/427 (51%), Gaps = 19/427 (4%)

Query: 197  VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            ++++   P++V +  ++  + K  +FD  + ++ +M+      D +++   IH  C+   
Sbjct: 606  MLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSR 665

Query: 257  VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
               A  +  +M++ G     VT  ++++GFC+  + +E   L + M   G   NVV YN 
Sbjct: 666  FSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNT 725

Query: 316  LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
            +I GL +N  ++ A+ I+  + +K   AD+ T+  LI+GLC +G                
Sbjct: 726  VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG---------------- 769

Query: 376  EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
              R  DAA L+  M K     N     +L++ F++   L  A  L+KEM R+   P +++
Sbjct: 770  --RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILT 827

Query: 436  YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            YN+LING C   R G+A      M+ KG  PD++TY+ LI G C+SK+++  +KL C+  
Sbjct: 828  YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 496  QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             +G   D   YN LIHG C AGK+  A ++++ M      P++VTYN L+D L   G  +
Sbjct: 888  HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947

Query: 556  KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            KAL +   + + ++  DII+YNI ++G+C   ++ +A+        +G+    I +  ++
Sbjct: 948  KALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMI 1007

Query: 616  RAVMNNG 622
              +  NG
Sbjct: 1008 SGLCRNG 1014



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 268/559 (47%), Gaps = 45/559 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   ++ +A R L  + ++ + PDV+++  +I+  VK G+L  A  ++ +M +  +  N
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI+G    G    AK+ ++ L+     +PNVVTYN +ING CK  R ++ ++++
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFD-LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RM +     D+FTY + IHG C+ G +  A+ ++  MV  G+  D +T+  ++ G C  
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 290 GKIKECFELWEVMGRKG--CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G+I      +  M R G   L +V+YNI+I GL +  KV+EA  ++  L  +    D+ T
Sbjct: 395 GEIGSAMVKFNDM-RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 348 HGVLINGLCKNGYLNKAIQ---------ILNEVEEG--GEGRLADAASL---------VN 387
           + ++I GLCKNG   +A +         I+ + E+G  GE    +  SL           
Sbjct: 454 YTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRR 513

Query: 388 RMDKHGCKLNAYTCNSLMNGFI------QASKLENAIFLFKEMSRKGCSPTVVS------ 435
            + + G     Y+  +L +  +       +S ++  +     +  +G +P   S      
Sbjct: 514 SIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASH 573

Query: 436 ---------YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
                    Y   +       +F +A+    EML+    P ++ ++ ++  + +  K D+
Sbjct: 574 HHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDI 633

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            + L  +    G + D+  + ILIH  C   +   AL L   M K    P++VT  +L++
Sbjct: 634 VIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLN 693

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  +     +A+ + + + E  L P+++ YN  + GLC    +++A E       +GI+ 
Sbjct: 694 GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVA 753

Query: 607 TTITWHILVRAVMNNGAST 625
             +T++ L+  + N+G  T
Sbjct: 754 DAVTYNTLISGLCNSGRWT 772



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 266/576 (46%), Gaps = 48/576 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I A+ K    D+A +++++M +         +      LC   +   AK+  + +  K
Sbjct: 246 ALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P+V +Y T+ING  KS  +   + +F  M+  G+  +   YN LI G+ + G    A
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K+I+  +V    V P+++T+ ++++GLC  G     +  ++ M+  E+      Y   IH
Sbjct: 366 KDIFSWMV-SCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM------- 302
           GLCKA  VE A  ++  +   G+  DA TY  MI G C+ G  +E  EL+  M       
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIIC 484

Query: 303 -------GRKGCLNVVSYNILI------RGLLENGKVD---EAISIWELLREKNCNADST 346
                  G  G  N VS   +I      R ++E+G +       ++W  L      A S+
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSS 544

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           +           G++ + + +L E     E R    AS  +           +     + 
Sbjct: 545 S---------VKGFVRRHLLLL-ERGNNPESRSFSGASHHHHHHH------HHHYRERLR 588

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
             +   K ++A  LF EM +    P++V +  ++  + K+ +F        +M   G   
Sbjct: 589 SELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D+ ++++LI+  C+  +  +AL L  + ++ GF P +     L++G C   + ++A+ L 
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            +M +    PN+V YNT+++GL K  D + ALEI+  + ++ +  D ++YN  + GLC+ 
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R +DA   L D + R I P  I +  L+   +  G
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 804



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 235/468 (50%), Gaps = 20/468 (4%)

Query: 115  QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            +F+ A      + +    P +  +  V+  + K       + +F +M   G+  ++  + 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 175  ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ILI  F +   +  A  +  ++ M+    P++VT   ++NG C+  RF E + + D M +
Sbjct: 655  ILIHCFCRCSRFSLALALLGKM-MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 235  NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
               E +   Y + I+GLCK  ++  A  ++  M + GI  DAVTYN +I G C +G+  +
Sbjct: 714  LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 295  CFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
               L  +++ RK   NV+ +  LI   ++ G + EA ++++ +  ++ + +  T+  LIN
Sbjct: 774  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 354  GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            G C                   +GRL DA  + + M   GC  +  T N+L+ GF ++ +
Sbjct: 834  GFCI------------------QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875

Query: 414  LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            +E+ + LF EM+ +G      +YNTLI+G C+  +   A      M++ G  PD++TY++
Sbjct: 876  VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            L++ LC + KI+ AL +     +     D+  YNI+I G+C   KV++A  L+ ++ ++ 
Sbjct: 936  LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
               + + Y T++ GL + G   +A ++   + E+   P    Y+ TL+
Sbjct: 996  VKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 220/465 (47%), Gaps = 21/465 (4%)

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            G + S     AL +F EM +     +VV +  L+        Y       +++ +   +
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMEL-FGI 96

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
             ++ ++ ++I+  C+C R    L +  +M K   +    T+ S +HG C    +  A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGL 320
           +   MV+SG   + V YN +ID  C+ G +    EL   M +KG L  ++V+YN L+ GL
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
             +G+  +A  I   + ++  N D  T   LI+   K G L++A ++  ++ +   G   
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP-- 274

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                           N  T NSL+NG     +L +A   F  M+ KGC P VV+YNTLI
Sbjct: 275 ----------------NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLI 318

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           NG CK  R  +     + M  +G   D  TY+ LI+G CQ  K+ +A  +    +  G T
Sbjct: 319 NGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVT 378

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+  + IL+HGLC  G++  A+  +++M+       +V YN ++ GL K    ++A E+
Sbjct: 379 PDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWEL 438

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +  +  E ++PD  +Y I + GLC      +A E        GI+
Sbjct: 439 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 219/446 (49%), Gaps = 21/446 (4%)

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           GF     +  A +++  +V ++   P+VV +  ++  +    R++  +    +M+     
Sbjct: 39  GFLHSIRFEDALDLFLEMV-QSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D +++   IH  C+   +  A  +  +M++ G     VT+ +++ GFC   +I + F L
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLINGLC 356
              M + G   NVV YN LI  L +NG V+ A+ +  E+ ++    AD  T+  L+ GLC
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            +G   +A +IL +                  M K     + +T  +L++ F++   L+ 
Sbjct: 218 YSGEWRQAARILRD------------------MTKRRINPDVFTFTALIDAFVKQGNLDE 259

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  L+K+M +    P  V+YN+LINGLC   R   A      M  KG  P+++TY+ LIN
Sbjct: 260 AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLIN 319

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G C+S++++  +KL  +  ++G   D   YN LIHG C  GK+  A  ++S M      P
Sbjct: 320 GFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +++T+  L+ GL   G+   A+  +N +        I++YNI + GLC   ++ +A+E  
Sbjct: 380 DIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF 439

Query: 597 NDALCRGILPTTITWHILVRAVMNNG 622
                 G+ P   T+ I++  +  NG
Sbjct: 440 CRLPVEGVKPDARTYTIMILGLCKNG 465



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 211/431 (48%), Gaps = 30/431 (6%)

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LC 111
           LE+++ Q    P  V  + +     N    + +  F +  E+FG    +          C
Sbjct: 54  LEMVQSQPL--PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R  +   A   L  + + G  P + ++G++++G      +  A ++   M + G E NVV
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV 171

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LID   K GD   A E+   +  +  +  ++VTYN ++ GLC  G + +   +   
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M K     D FT+ + I    K GN++ A+ +Y++M++S I  + VTYN++I+G C  G+
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +    + +++M  KGC  NVV+YN LI G  ++ +V++ + +++ +  +    D+ T+  
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G C+                   G+L  A  + + M   G   +  T   L++G   
Sbjct: 352 LIHGYCQ------------------VGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             ++ +A+  F +M        +V+YN +I+GLCK ++  EA+     +  +G KPD  T
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 471 YSLLINGLCQS 481
           Y+++I GLC++
Sbjct: 454 YTIMILGLCKN 464



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 31/379 (8%)

Query: 70   YCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKA 119
            + P  V L S++  + + +   +A+ +   M E+ G E  +         LC+ R    A
Sbjct: 681  FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL-GLEPNVVIYNTVINGLCKNRDLNNA 739

Query: 120  KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
                  + +KG+  D  +Y T+I+GL  SG    A  +  +M +R ++ NV+ +  LID 
Sbjct: 740  LEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 799

Query: 180  FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
            F K+G+ + AK +++ ++   SV+PN++TYN +ING C  GR  +   M+D M       
Sbjct: 800  FVKEGNLLEAKNLYKEMI-RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP 858

Query: 240  DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
            D  TY + I G CK+  VE   +++ EM   G+  DA TYN +I G+C+AGK+    +++
Sbjct: 859  DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918

Query: 300  EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
              M   G   ++V+YNIL+  L  NGK+++A+ + E L++   + D  T+ ++I G+C+N
Sbjct: 919  NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978

Query: 359  GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                               ++ +A  L   + + G KL+A    ++++G  +      A 
Sbjct: 979  ------------------DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREAD 1020

Query: 419  FLFKEMSRKGCSPTVVSYN 437
             L   M   G  P+   Y+
Sbjct: 1021 KLCTRMKEDGFMPSERIYD 1039



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 1/220 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L  GF+ + + E+A+ LF EM +    P+VV +  L+  +  + R+     F ++M   G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D+ ++++LI+  C+  ++ +AL +  + ++ G+ P +  +  L+HG C   ++ DA 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKG 582
            L ++M K    PN+V YNTL+D L K GD + ALE+ N + ++ RL  D+++YN  L G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           LC       A   L D   R I P   T+  L+ A +  G
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 267/560 (47%), Gaps = 34/560 (6%)

Query: 89  PDKALDVFQRMNE------------IFGCEAGILCRKRQF--EKAKRFLNSLWEKGLKPD 134
           P  A+++F+RM+             I+     I C +R    E A      L   GL PD
Sbjct: 97  PALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPD 156

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V SY T+I+G  K G++  A  +F +M E+ V  +VV YN LIDG  K  + ++++ + E
Sbjct: 157 VCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLE 216

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           ++V +  + PN  TYN +I G    G + E + ++  M  +          SFIH LC+ 
Sbjct: 217 QMV-DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             ++ A+ ++  MV  G   + ++Y+ ++ G+   G       L  +M  KG + N   +
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           NILI      G +D+A+ I+E ++ K    D+ T   +I+ LC+ G L+ A+   N + +
Sbjct: 336 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 395

Query: 374 GG-----------------EGRLADAASLVNRM-DKHGCKLNAYTCNSLMNGFIQASKLE 415
            G                  G L  A  L++ M +K          +S++N   +  ++ 
Sbjct: 396 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
               +   M + G  P VV++N+L+ G C V    EA++ +  M   G +P+   Y  L+
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +G C++ +ID AL +    L KG  P   +YNI++HGL  A +   A +++  M +    
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTT 575

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            ++ TY  ++ GL +    D+A  +   +    ++ DII++NI +  +    R  +A E 
Sbjct: 576 VSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKEL 635

Query: 596 LNDALCRGILPTTITWHILV 615
                  G++PT  T+++++
Sbjct: 636 FAAISTYGLVPTVHTYNLMI 655



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 245/509 (48%), Gaps = 20/509 (3%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +Y+Y  +I+   +      ALAVF  +   G+  +V  YN LIDGF K+G+  +A E+
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           + +++ E SV P+VVTYN +I+GLCK     +   + ++M       ++ TY S I+G  
Sbjct: 180 FYKMI-EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
            AG  + + RV++EM  SG+    V  N+ I   CR  +IKE  ++++ M  KG   N++
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SY+ L+ G    G      S+  L+  K    +     +LIN   + G ++KA+ I  ++
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 372 EEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           +  G                  GRL DA    N M   G   +      L+ G     +L
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 415 ENAIFLFKEMSRKGCSPTVVSY-NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
             A  L  EM  K   P  V Y +++IN L K  R  E    +  M++ G +P+++T++ 
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           L+ G C    ++ A  L       G  P+  +Y  L+ G C  G+++DAL ++ +M  + 
Sbjct: 479 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 538

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P  V YN ++ GLF+      A ++++ ++E      I +Y + L GLC  +   +A 
Sbjct: 539 VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEAN 598

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
             L       +    IT++I++ A++  G
Sbjct: 599 MLLEKLFAMNVKFDIITFNIVISAMLKVG 627



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 224/459 (48%), Gaps = 21/459 (4%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +  YNILID + +      A  ++ RL + T + P+V +YN +I+G  K G  D+  E+
Sbjct: 121 TIYTYNILIDCYRRMHRPELALAVFGRL-LRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + +M +     D  TY S I GLCK   +  +ERV  +MV++GI  +  TYN++I G+  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 289 AGKIKECFELWEVMGRKGCLN-VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AG  KE   +++ M   G +  VV+ N  I  L  + ++ EA  I++ +  K    +  +
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L++G                     EG  A+  SLVN M   G   N    N L+N 
Sbjct: 300 YSTLLHGY------------------AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINA 341

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           + +   ++ A+ +F++M  KG  P  V++ T+I+ LC++ R  +A      M++ G  P 
Sbjct: 342 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 401

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLY 526
              Y  LI G C   ++  A +L  + + K   P  V  ++ +I+ L   G+V +   + 
Sbjct: 402 EAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIM 461

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M +    PN+VT+N+LM+G    G+ ++A  + + +    + P+   Y   + G C  
Sbjct: 462 DLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 521

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            R+ DA     D L +G+ PT++ ++I++  +     +T
Sbjct: 522 GRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTT 560



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 133/244 (54%), Gaps = 6/244 (2%)

Query: 380 ADAASLVNRMDKHGCKLNA------YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
           A A  L  RMD+  C   A      YT N L++ + +  + E A+ +F  + R G  P V
Sbjct: 98  ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDV 157

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            SYNTLI+G  K     +AY    +M+E+   PD++TY+ LI+GLC++K++  + ++  Q
Sbjct: 158 CSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQ 217

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            +  G  P+   YN LI+G  +AG  +++++++  M     +P +V  N+ +  L +   
Sbjct: 218 MVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 277

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A +I++ ++ +  +P+IISY+  L G  +    ++    +N  + +GI+P    ++I
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 614 LVRA 617
           L+ A
Sbjct: 338 LINA 341



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 25/333 (7%)

Query: 297 ELWEVMGRKGCLN-------VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           EL++ M R  C +       + +YNILI       + + A++++  L       D  ++ 
Sbjct: 102 ELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYN 161

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G  K G ++KA +                  L  +M +     +  T NSL++G  
Sbjct: 162 TLIDGFSKEGEVDKAYE------------------LFYKMIEQSVSPDVVTYNSLIDGLC 203

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++  +  + ++M   G  P   +YN+LI G      + E+    KEM   G  P ++
Sbjct: 204 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 263

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             +  I+ LC+  +I  A  +    + KG  P++  Y+ L+HG  + G   +   L + M
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +  VPN   +N L++   + G  DKA+ I+  +  + + PD +++   +  LC   R+
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA    N  +  G+ P+   +  L++   N+G
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHG 416


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 266/556 (47%), Gaps = 56/556 (10%)

Query: 115 QFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           Q + A++    + +   + PDVY+Y  +I  L ++G++  A  +  E+   G++  VV Y
Sbjct: 195 QLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTY 254

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+L+D   + G    A ++  R+V E  + P++VT+ ++INGL +  RF E   +   M+
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMV-EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEME 313

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 +   Y   I   C+ G+   A R++ EMV  GI    VTYN +    C+ G+++
Sbjct: 314 GFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 373

Query: 294 ECFELWEVMGRKGCL-------NVVSYNI-----------LIRGLL-------------- 321
              ++ + M   G         +VV++++           LIR ++              
Sbjct: 374 HAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTAC 433

Query: 322 -----ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
                + GK +EA  IW L+  K    +  T   LI+GLC+   + +A ++L  + + G 
Sbjct: 434 IQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493

Query: 376 ----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             ++ +A  L + M K G K + +T N+ +  +    K+E+ + 
Sbjct: 494 EFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILH 553

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L  +M  +G  P +V+Y T+I+G CK +   +A  ++ E+++ G +P+ + Y+ LI G  
Sbjct: 554 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYG 613

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           ++  I  A+ +       G  P    YN L++ +C AG VE+A ++++    +N    ++
Sbjct: 614 RNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVI 673

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            Y  ++ G  K G  D+A+  +  +    +RP+ ++Y   +   C C    +AF+  ++ 
Sbjct: 674 GYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEM 733

Query: 600 LCRGILPTTITWHILV 615
           +  GI+P T++++ L+
Sbjct: 734 VSSGIVPDTVSYNTLI 749



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 228/486 (46%), Gaps = 19/486 (3%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G L  A   F E+  RG   ++   NIL++     G    A++++  +    +V P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y VMI  LC+ G  D    M   ++++  +    TY   +  LC++G VE A ++   MV
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVD 327
           E  +    VT+  +I+G  R  +  E    L E+ G     N V YN LI      G   
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV---------------- 371
           EA+ +++ +  K       T+ ++   LCK G +  A QIL+E+                
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 372 --EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                G GRL     L+  M     K N     + +    +  K E A  ++  +  KG 
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              + + N LI+GLC+     EA   +K M++ G + D ITY+++I   C++ K++ A++
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L    +++GF PD+  +N  +   C+ GKVED L L   MK     P++VTY T++DG  
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K  D  KA +    +++  LRP+ + YN  + G      +SDA   L+     GI PT I
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 610 TWHILV 615
           T++ L+
Sbjct: 639 TYNSLM 644



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 221/480 (46%), Gaps = 53/480 (11%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG     L R ++F +    L  +   G+ P+   Y  +I    + G    AL +FDEM 
Sbjct: 289 FGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMV 348

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWE---------------------------- 194
            +G++  VV YN++     K+G+   A++I +                            
Sbjct: 349 SKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRL 408

Query: 195 ----RLVMETS---VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
               RL+ E     + PN       I  LCK G+ +E  E+W  +       +  T  + 
Sbjct: 409 DVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNAL 468

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           IHGLC+  N++ A +V + MV+SG+  D +TYN MI   C+A K++E  +L + M ++G 
Sbjct: 469 IHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGF 528

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ ++N  +R     GKV++ + + + ++ +    D  T+G +I+G CK   ++KA +
Sbjct: 529 KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588

Query: 367 ILNEVEE--------------GGEGR---LADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L E+ +              GG GR   ++DA  +++ M  +G +    T NSLM    
Sbjct: 589 YLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMC 648

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            A  +E A  +F +   K     V+ Y  +I G CK+ +  EA  + KEM  +  +P+ +
Sbjct: 649 HAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKM 708

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ L+   C+    + A KL  + +  G  PD   YN LI G C    ++  ++  + M
Sbjct: 709 TYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 19/334 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + E+A      +  KGL  ++ +   +I+GL +  ++  A  V   M + GVE +
Sbjct: 437 LCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFD 496

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + YNI+I    K      A ++ + ++ +    P++ T+N  +   C  G+ ++ L + 
Sbjct: 497 RITYNIMIQFCCKASKMEEAIQLRDDMI-KRGFKPDLFTFNTFLRAYCNLGKVEDILHLL 555

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+MK    + D  TY + I G CKA +V  A +   E++++G+  +AV YNA+I G+ R 
Sbjct: 556 DQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRN 615

Query: 290 GKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I +   + + M   G     ++YN L+  +   G V+EA  I+     KN       +
Sbjct: 616 GSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGY 675

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDK 391
            ++I G CK G +++A+    E+                      G   +A  L + M  
Sbjct: 676 TIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVS 735

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            G   +  + N+L++G  +   L+  +    EMS
Sbjct: 736 SGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 228/463 (49%), Gaps = 30/463 (6%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            +  N  C N L+    K   + +A +I+   ++      N +TYN +I G CK G  + 
Sbjct: 65  SIHNNFTC-NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMER 123

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++   MK+     D  T+ S +  LC  GN+  A + +RE VE     D+V +N ++ 
Sbjct: 124 AFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVH 181

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+A ++ E  ++ E M  +G + +VV+YN LI GL ++ +++EA  + E + ++    
Sbjct: 182 GLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP 241

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           +  T+  LI G CK G    A Q                  L+ RM + G   +  T NS
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQ------------------LIERMIQSGTHPDVVTFNS 283

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L++GF Q SK++ A  +   M +  C+P +V+YN LI+GLC   R  EA   + EM  +G
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             PD+ITY+ LI   C++ +I+ A ++    +++G  PD   Y  L   L  + + ++A 
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF 403

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR----PDIISYNIT 579
            L  NM     +PNL T+N+LM+GL     C + L+   H+L    R    P   +Y + 
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLC----CSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + GLC   R+ DA E L   +  GI P   +   +V  +   G
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 231/454 (50%), Gaps = 22/454 (4%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           +R  +  + F + L  +    +  +Y T+I G  K+GD+  A  +  EM ERG   +VV 
Sbjct: 83  RRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVT 142

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           ++ ++      G+  RA + +   V      P+ V +N++++GLCK  +  E  +M + M
Sbjct: 143 HSSIVQALCNTGNLSRAMQYFRESV---ECAPDSVLFNILVHGLCKANQLSEARQMIEEM 199

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            +     D  TY S I GLCK+  +E A ++   MV+  +  + VTYN +I G+C+ G  
Sbjct: 200 SERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT 259

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
               +L E M + G   +VV++N LI G  +  K+D+A  +  L+++  C  +  T+ VL
Sbjct: 260 GLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+GLC  G  N+A ++L+E                  MD  G   +  T NSL+  F + 
Sbjct: 320 ISGLCDAGRANEACELLSE------------------MDGRGILPDIITYNSLIGIFCRN 361

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            ++E A  +   M  +G  P  +SY TL   L K ERF EA++ +  M + G  P++ T+
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L+ GLC S+++D A  L     + G  P  + Y +L+ GLC AG+V+DA ++   M  
Sbjct: 422 NSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVS 481

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
               P + +  T++  L + G  D AL  ++ ++
Sbjct: 482 EGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 205/399 (51%), Gaps = 21/399 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G  C+    E+A + L  + E+G  PDV ++ +++  L  +G+L  A+  F E  E   +
Sbjct: 113 GGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPD 172

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           +  V +NIL+ G  K      A+++ E +  E  + P+VVTYN +I+GLCK  R +E  +
Sbjct: 173 S--VLFNILVHGLCKANQLSEARQMIEEM-SERGIVPDVVTYNSLIDGLCKSYRMEEARQ 229

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + + M K +   +  TY + I+G CK G    A ++   M++SG   D VT+N++I GFC
Sbjct: 230 LLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFC 289

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +  KI +  E+  +M +  C  N+V+YN+LI GL + G+ +EA  +   +  +    D  
Sbjct: 290 QKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDII 349

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  LI   C+N  + +A QI N + E G                   R  +A +L++ M
Sbjct: 350 TYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNM 409

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G   N +T NSLM G   + +L+ A  L   M R GC P   +Y  L+ GLCK  R 
Sbjct: 410 FDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRV 469

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +A   +  M+ +G +P + +   +++ L +  K D+AL
Sbjct: 470 DDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 26/375 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           S++QA        +A+  F+   E      +F      LC+  Q  +A++ +  + E+G+
Sbjct: 145 SIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
            PDV +Y ++I+GL KS  +  A  + + M +R V  N+V YN LI G+ K G    A +
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + ER++ ++  +P+VVT+N +I+G C+  + D+  E+   MKK     +  TY   I GL
Sbjct: 265 LIERMI-QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGL 323

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           C AG    A  +  EM   GI  D +TYN++I  FCR  +I++ F++  +M  +G + + 
Sbjct: 324 CDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDG 383

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           +SY  L   LL++ + DEA ++ + + +     +  T   L+ GLC +            
Sbjct: 384 ISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCS------------ 431

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                  RL +A  L+  M + GC   A T   L+ G  +A ++++A  +   M  +G  
Sbjct: 432 ------RRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQ 485

Query: 431 PTVVSYNTLINGLCK 445
           P V S  T+++ L +
Sbjct: 486 PLVSSSGTIVHTLAR 500



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 6/212 (2%)

Query: 417 AIFLFKEMSRKGCSPTV---VSYNTLINGLCKVERFGEAYS-FVKEMLEKGWKPDMITYS 472
           ++F F+ ++R     ++    + N L+  L K  R  +AY  F  E+L +    + ITY+
Sbjct: 50  SLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYN 109

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI G C++  ++ A +L  +  ++G +PDV  ++ ++  LC+ G +  A+Q +   +  
Sbjct: 110 TLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESV 167

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            C P+ V +N L+ GL K     +A ++   + E  + PD+++YN  + GLC   RM +A
Sbjct: 168 ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEA 227

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + L   + R + P  +T++ L+      G +
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT 259


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 259/552 (46%), Gaps = 56/552 (10%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R+ + +  +     L   G  PDV++   ++  L  +G +  A  VFD M  R       
Sbjct: 120 REDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMPAR------- 172

Query: 172 CYNILIDGFFKKGDYMRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             N    G   +G Y RA    + L V++     N+V  N ++ G C+ GR DE   + D
Sbjct: 173 --NEFSSGILARG-YCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVD 229

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES---GI-FVDAVTYNAMIDGF 286
           RM+      +  T+   I  LCKAG V  A R++ +M E+   G+   D VT++ M+ GF
Sbjct: 230 RMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGF 289

Query: 287 CRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C AG + E   L ++M   G L  V SYN  + GL++NG+V EA  +   +  +    +S
Sbjct: 290 CDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNS 349

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNR 388
            T+ ++++GLCK G      ++ + V  G                  +G    A  +++ 
Sbjct: 350 YTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDE 409

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M + GC  N +T N L+   ++A +      L + MS KG S    S N +I+GLC+  +
Sbjct: 410 MAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSK 469

Query: 449 FGEAYSFVKEM-----------------------LEKGWKPDMITYSLLINGLCQSKKID 485
              A   V  M                       + K   PD ITYS L+N LC+  + D
Sbjct: 470 LEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFD 529

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A K   + + K  +PD  +Y+  IHG C  GK   A+++  +M+KR+C P+  +YN L+
Sbjct: 530 EAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLI 589

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            G  +    D+ L++ + + E+ +  ++++YN  +K  C    ++ A   L++ L   I+
Sbjct: 590 WGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIV 649

Query: 606 PTTITWHILVRA 617
           P   ++ +L++A
Sbjct: 650 PNVTSFGLLIKA 661



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 261/527 (49%), Gaps = 45/527 (8%)

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           G+++     LD    MN +  C   +   CR+ + ++A+R ++ +  +GL P+V ++   
Sbjct: 188 GRSADALAVLDAMPEMNLVV-CNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGR 246

Query: 142 INGLVKSGDLLGALAVFDEM---FERGV-ETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           I+ L K+G +L A  +F++M   +E+G+   + V +++++ GF   G    A  + +  +
Sbjct: 247 ISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVD--I 304

Query: 198 METSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           M    +   V +YN  ++GL K GR  E  E+   M     + +S+TY   + GLCK G 
Sbjct: 305 MRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGK 364

Query: 257 VEGAERVYREMVESGIFV-DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
                RV  + V SG+   D VTY +++  +C  G       + + M +KGC  N+ +YN
Sbjct: 365 AFDVRRV-EDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYN 423

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           +L++ LL+ G+  E   + E + EK  + D+ +  ++I+GLC+N  L  A+ I++ +   
Sbjct: 424 VLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGM--W 481

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS-RKGCSPTV 433
            EGRLA                       L N F+          L  + S  K C P  
Sbjct: 482 NEGRLA--------------------LRRLGNSFVS---------LVSDSSISKSCLPDR 512

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++Y+TL+N LCK  RF EA   + EM+ K   PD + Y   I+G C   K  +A+K+   
Sbjct: 513 ITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRD 572

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             ++   P    YN+LI G     K ++ L+L S MK++    N++TYN+L+      G 
Sbjct: 573 MEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGM 632

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
            +KA+ + + +L+  + P++ S+ + +K  C  +  S A    + AL
Sbjct: 633 VNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVAL 679



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 221/492 (44%), Gaps = 61/492 (12%)

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G       YN L+    ++      + +++ L++  +  P+V T N ++  L   GR D 
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGAT-PDVFTRNALLEALSAAGRMDL 161

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              ++D M      ++ F+      G C+AG    A  V   M E    ++ V  N ++ 
Sbjct: 162 ARRVFDAMPA----RNEFSSGILARGYCRAGRSADALAVLDAMPE----MNLVVCNTVVA 213

Query: 285 GFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREK---- 339
           GFCR G++ E   L + M  +G   NVV++N  I  L + G+V EA  I+  ++E     
Sbjct: 214 GFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQG 273

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D  T  V+++G C  G +++A  +++ +  GG  R                K+ +Y
Sbjct: 274 LPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLR----------------KVESY 317

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF--VK 457
             N  ++G ++  ++  A  L  EM+ +G  P   +YN +++GLCK    G+A+    V+
Sbjct: 318 --NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKE---GKAFDVRRVE 372

Query: 458 EMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           + +  G   PD++TY+ L++  C       A ++  +  QKG  P++  YN+L+  L  A
Sbjct: 373 DFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKA 432

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI----WNH--------- 563
           G+  +  +L   M ++    +  + N ++DGL +    + A++I    WN          
Sbjct: 433 GRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLG 492

Query: 564 ----------ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
                      + +   PD I+Y+  +  LC   R  +A + L + + + I P ++ +  
Sbjct: 493 NSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDT 552

Query: 614 LVRAVMNNGAST 625
            +     +G ++
Sbjct: 553 FIHGYCMHGKTS 564



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 193/444 (43%), Gaps = 44/444 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +    +R  + +    + PDV +Y ++++     G+   A  + DEM ++G   N
Sbjct: 359 LCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPN 418

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE-- 227
           +  YN+L+    K G     + + ER+  E     +  + N++I+GLC+  + +  ++  
Sbjct: 419 LFTYNVLLQSLLKAGRTTEVERLLERMS-EKGYSLDTASCNIIIDGLCRNSKLEMAMDIV 477

Query: 228 --MWDRMKKNERE-------------------KDSFTYCSFIHGLCKAGNVEGAERVYRE 266
             MW+  +   R                     D  TY + ++ LCK G  + A++   E
Sbjct: 478 DGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVE 537

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M+   I  D+V Y+  I G+C  GK     ++   M ++ C  +  SYN+LI G  E  K
Sbjct: 538 MIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQK 597

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
            DE + +   ++EK  +++  T+  LI   C  G +NKA+ +L+E               
Sbjct: 598 SDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDE--------------- 642

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
              M ++    N  +   L+  F + +    A  +F +++   C    V Y  +   L  
Sbjct: 643 ---MLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELST 698

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
             R+ EA + ++  LE         Y  +I GLC   + D A  L   F+ KG++ D   
Sbjct: 699 YARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPAT 758

Query: 506 YNILIHGLCSAGKVEDALQLYSNM 529
           +  +I  L  +GK  DA  L   M
Sbjct: 759 FMPVIDALSESGKKHDADMLSEKM 782



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 10/289 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +F++AK+ L  +  K + PD   Y T I+G    G    A+ V  +M +R    +
Sbjct: 522 LCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPS 581

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
              YN+LI GF +K    ++ EI + +  + E  +  NV+TYN +I   C  G  ++ + 
Sbjct: 582 TRSYNLLIWGFQEK---QKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMP 638

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           + D M +NE   +  ++   I   CK  +   A+RV+ ++  S      V Y  M     
Sbjct: 639 LLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELS 697

Query: 288 RAGKIKECFELWEV-MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
              +  E   + E  +  +  +    Y  +I GL +  + D A S+ +L   K  + D  
Sbjct: 698 TYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPA 757

Query: 347 THGVLINGLCKNGYLNKAIQI---LNEVEEGGEGRLADAASLVNRMDKH 392
           T   +I+ L ++G  + A  +   + E+ +  +G+ A +  +  R  KH
Sbjct: 758 TFMPVIDALSESGKKHDADMLSEKMMEIADCNDGQSAVSGVVTPRSRKH 806


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 209/392 (53%), Gaps = 19/392 (4%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T N +++ LCK G   E  ++ D M +  +  +S    + I GL + G +E A RV + M
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           V SG+  D +TYN M+ GFC+  +++   +L E M   GC  +V++YN +IR L +NGK 
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           D+A+  W     + C      + +LI  + K+    +A+++L +                
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLED---------------- 187

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   GC  +  T NSL+N   +  K E+A  +   +   G  P  ++YN+L++ LC  
Sbjct: 188 --MAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSC 245

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
             + E    +  M +    P ++TY++LINGLC+   ++ A+    Q + +  +PD+  Y
Sbjct: 246 GLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITY 305

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           N L+  LC  G V++ALQ++  +   NC P L+TYNT++DGL + G  D+AL+++N ++E
Sbjct: 306 NTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIE 365

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + + PD I++   + G C   ++ DA E L +
Sbjct: 366 KGIAPDGITHRSLVWGFCWIDQVEDAVEILRE 397



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 230/449 (51%), Gaps = 27/449 (6%)

Query: 91  KALDVFQRMNEIFG--CEAGI---LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           K +D+  R+N+I    C   +   L R  + E+A R L ++   GL PDV +Y  ++ G 
Sbjct: 43  KLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGF 102

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            K   L  A+ + ++M   G   +V+ YN +I   F  G + +A E W R  +     P 
Sbjct: 103 CKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFW-RGQLRRGCLPY 161

Query: 206 VVTYNVMINGLCK-CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++ Y ++I  + K CG     LE+ + M       D  TY S ++   K G  E A  + 
Sbjct: 162 LIPYTILIELVWKHCGTV-RALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALII 220

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLEN 323
             ++  G+  +A+TYN+++   C  G   E  E+  +M +      VV+YNILI GL + 
Sbjct: 221 YNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKC 280

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G V+ AI+ +  +  +NC+ D  T+  L+  LCK G +++A+Q+           L+D+ 
Sbjct: 281 GLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF--------VLLSDS- 331

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                     C     T N++++G  +   ++ A+ L+ +M  KG +P  +++ +L+ G 
Sbjct: 332 ---------NCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGF 382

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C +++  +A   ++EM ++  + +   Y L+INGLC++K++D+A+++    +   + PD 
Sbjct: 383 CWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDE 442

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            +Y+ LI  +  AG VE+A +L+  + +R
Sbjct: 443 EIYSTLIKSVADAGMVEEADELHQKLIER 471



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 58/334 (17%)

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLV 386
           D  T+  +++ LCK G L +A ++++ +    +                 GR+  A+ ++
Sbjct: 21  DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   G   +  T N ++ GF +  +L +AI L ++MS  GC P V++YNT+I  L   
Sbjct: 81  KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140

Query: 447 ERFGEAYSFVKEMLEKG---------------WK--------------------PDMITY 471
            +F +A  F +  L +G               WK                    PD++TY
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L+N   +  K + A  +    L  G  P+   YN L+H LCS G  ++  ++ + MKK
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
            +  P +VTYN L++GL K G  ++A+  +  ++ E   PDII+YN  L  LC    + +
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDE 320

Query: 592 A---FEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   F  L+D+ C    P  IT++ ++  +   G
Sbjct: 321 ALQVFVLLSDSNCS---PGLITYNTVIDGLTRRG 351


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 166/613 (27%), Positives = 281/613 (45%), Gaps = 52/613 (8%)

Query: 9   LNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQK 68
           L+LL     PH+           P       LF  +  RL  P  ++H   ++ ++    
Sbjct: 61  LSLLSRRLTPHSVADALLCDALPPASRIRLFLFSALTPRLRSP--LLHSRAVVPILLATD 118

Query: 69  CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILCRKRQFEKAKRFLNSLW 127
                  A++  QA G    P  A +       IF    AG     R  E  + F     
Sbjct: 119 ADAAMYDAIADAQAAGLQP-PTAAFEAL-----IFAHASAG-----RHHEAVEAFSRMEG 167

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLG-ALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
           E G +P  + Y  V+  LV SG  +  ALA+++ M   G   N   YN+LI G  K+G  
Sbjct: 168 EFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTP 227

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           + A ++++ ++    + PNV T+ ++++ +C  G+  E   +   M+      D  TY +
Sbjct: 228 VDALKLFDEMI-SRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNA 286

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVT-YNAMIDGFCRAGKIKECFELW-EVMGR 304
           F+ GLCKAG V+ A      +  +G FV  +  Y+ +IDG   AG+ +E F+ + EV+ +
Sbjct: 287 FLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQ 346

Query: 305 KGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
                ++V Y I+IRG  E G+ ++A + ++ ++EK    D+  +  L+  LC  G L+ 
Sbjct: 347 ADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLD- 405

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                             A SL++ M ++   L+ +T  +++ G  +   ++ A+ +F  
Sbjct: 406 -----------------GARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDG 448

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI-------------- 469
           M   GC P+V++YN LI+GL +  R  EA     +M E G  P +               
Sbjct: 449 MVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSE 507

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T   L+  +CQS ++  A KL    +  G  PDV  YN L++GLC    ++ AL+L+  +
Sbjct: 508 TLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFREL 567

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           + +    + +TY TL+D L +    + AL ++  IL     P +  YN  ++ LC   ++
Sbjct: 568 QVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKL 627

Query: 590 SDAFEFLNDALCR 602
           S A     D L R
Sbjct: 628 SQAINLWFDHLPR 640



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 233/481 (48%), Gaps = 49/481 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET- 168
           +C   Q ++A+  L+S+ +KG  PD  +Y   ++GL K+G +  A+   + +   G    
Sbjct: 256 MCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVL 315

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
            +  Y+ LIDG F  G Y    + +  ++ +  V P++V Y +MI G  + GR ++    
Sbjct: 316 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAF 375

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D MK+     D+F Y + +  LC AG+++GA  +  EMV + + +D  TY  MI G C+
Sbjct: 376 FDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCK 435

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-------------E 334
              + E  ++++ M   GC  +V++YN+LI GL    +++EA  ++              
Sbjct: 436 EQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 495

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
           L    N   DS T   L+  +C++G + KA ++L  + +                   G 
Sbjct: 496 LTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDS------------------GV 537

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             +  T N+L+NG  +   L+ A+ LF+E+  KG     ++Y TLI+ L +  R+ +A +
Sbjct: 538 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALT 597

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG-- 512
             +++L  G  P M  Y+ ++  LC+ +K+  A+ L    L +        YN+L     
Sbjct: 598 LFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRK-------YNLLAQDEV 650

Query: 513 LCSAGK------VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           + SA K      + +A++    + +     N   Y   + GL + G  + AL+I+ HILE
Sbjct: 651 ISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIF-HILE 709

Query: 567 E 567
           E
Sbjct: 710 E 710



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 205/468 (43%), Gaps = 69/468 (14%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGN-VEGAE 261
           P    +  +I      GR  E +E + RM+        +F Y + +  L  +G  V  A 
Sbjct: 137 PPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLAL 196

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
            +Y  MV +G   +  TYN +I G C+ G   +  +L++ M  +G   NV ++ IL+  +
Sbjct: 197 ALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSM 256

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G++ EA ++   + +K C  D  T+   ++GLCK G +++AI+ L  +   G   L 
Sbjct: 257 CNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLG 316

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGCSPTVVSYNTL 439
                          L  Y+C  L++G   A + E     + E + +   SP +V Y  +
Sbjct: 317 ---------------LKGYSC--LIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIM 359

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I G  +  R  +A++F  EM EKG+ PD   Y+ L+  LC +  +D A  L  + ++   
Sbjct: 360 IRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNV 419

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK--------- 550
             D+  Y  +I GLC    V++A+Q++  M +  C P+++TYN L+DGL++         
Sbjct: 420 VLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARM 479

Query: 551 ---------------------------------------TGDCDKALEIWNHILEERLRP 571
                                                  +G   KA ++   I++  + P
Sbjct: 480 LFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVP 539

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           D+++YN  L GLC    +  A     +   +G     IT+  L+ +++
Sbjct: 540 DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLL 587



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 202/450 (44%), Gaps = 40/450 (8%)

Query: 90  DKALDVFQRMNEIFGC-EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKS 148
           D + D+      I GC EAG      +   A  F + + EKG  PD + Y T++  L  +
Sbjct: 348 DVSPDIVLYTIMIRGCAEAG------RTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDA 401

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           GDL GA ++  EM    V  ++  Y  +I G  K+     A ++++ +V E   +P+V+T
Sbjct: 402 GDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMV-EVGCHPSVMT 460

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNERE-------------KDSFTYCSFIHGLCKAG 255
           YNV+I+GL +  R +E   ++ +M+                  +DS T    +  +C++G
Sbjct: 461 YNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSG 520

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYN 314
            V  A ++ R +++SG+  D VTYN +++G C+   +     L+  +  KG  L+ ++Y 
Sbjct: 521 QVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYG 580

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI------- 367
            LI  LL   + ++A+++++ +           +  ++  LC+   L++AI +       
Sbjct: 581 TLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPR 640

Query: 368 ------LNEVEEGG-----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                  +EV         EG L +A   + ++D+    +N+      + G IQA ++E+
Sbjct: 641 KYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIED 700

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +F  +   G   T      L   LC     G A   +   L+KG+       + L+ 
Sbjct: 701 ALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLC 760

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            LC   +   A  L  +    G+  D  ++
Sbjct: 761 SLCIHHRRKDAQALAWRMHLVGYDMDAYLH 790



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 133/254 (52%), Gaps = 4/254 (1%)

Query: 373 EGGEGRLADAASLVNRMD-KHGCKLNAYTCNSLMNGFIQAS-KLENAIFLFKEMSRKGCS 430
               GR  +A    +RM+ + GC+   +  N+++   + +   +  A+ L+  M   GC 
Sbjct: 149 HASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCL 208

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P   +YN LI+GLCK     +A     EM+ +G  P++ T+++L++ +C + ++  A  L
Sbjct: 209 PNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENL 268

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC-VPNLVTYNTLMDGLF 549
                 KG  PD   YN  + GLC AG+V++A++    ++     V  L  Y+ L+DGLF
Sbjct: 269 LHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLF 328

Query: 550 KTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
             G  ++  + +  +LE+  + PDI+ Y I ++G     R +DAF F ++   +G  P T
Sbjct: 329 LAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDT 388

Query: 609 ITWHILVRAVMNNG 622
             ++ L++A+ + G
Sbjct: 389 FCYNTLLKALCDAG 402



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L  R+  H    +A  C++L      AS++   +FLF  ++ +  SP + S   ++  L 
Sbjct: 64  LSRRLTPHSVA-DALLCDAL----PPASRIR--LFLFSALTPRLRSPLLHS-RAVVPILL 115

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDV 503
             +     Y  + +    G +P    +  LI     + +   A++   +   + G  P  
Sbjct: 116 ATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTT 175

Query: 504 TMYNILIHGL-CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
            +YN ++  L  S G V  AL LY+ M    C+PN  TYN L+ GL K G    AL++++
Sbjct: 176 FVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFD 235

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++   + P++ ++ I L  +C+  ++ +A   L+    +G  P  +T++  +  +   G
Sbjct: 236 EMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAG 295


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 211/416 (50%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  + R
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLE 322
           EM E  GI  +  TY  +I G+C+ G++ E  ++++ M  KG +    V YN LI G  +
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   + + E+       T+ +L++ L                    +GR  +A
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM------------------DGRGTEA 311

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             LV  M   G  L+ +T N L+NG  +   ++ A+ +F+ MSR+G   TVV+Y +LI  
Sbjct: 312 YELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  E      E + +G +PD++ Y+ LIN    S  ID A ++  +  +K   PD
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ GLC  G+V++A +L   M KR   P+LVTYNTL+ G    GD   AL I N
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++ +   P +++YN  ++GLC   +  DA   + + +  GI P   T+  L+  +
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 205/402 (50%), Gaps = 22/402 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           E+  +    N V YN +I GF  +G    A +I   +     + PN  TY  +I+G CK 
Sbjct: 175 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234

Query: 220 GRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           GR DE ++++D M  K E + ++  Y + I G C  G ++ A      MVE G+ +   T
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++      G+  E +EL E MG KG  L+V +YNILI G  + G V +A+ I+E + 
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +   A   T+  LI  L K G + +  ++ +E                    + G + +
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV------------------RRGIRPD 396

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               N+L+N    +  ++ A  +  EM +K  +P  V+YNTL+ GLC + R  EA   + 
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM ++G +PD++TY+ LI+G      +  AL++  + + KGF P +  YN LI GLC  G
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           + +DA  +   M +    P+  TY +L++GL  T + ++A++
Sbjct: 517 QGDDAENMVKEMVENGITPDDSTYISLIEGL--TTEDERAID 556



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 206/398 (51%), Gaps = 26/398 (6%)

Query: 89  PDKALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVIN 143
           P +AL++ ++M       +       C + + + A   +  + E+G + P+ Y+YGTVI+
Sbjct: 170 PARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 229

Query: 144 GLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           G  K G +  A+ VFDEM  +G V+   V YN LI G+  +G    A    +R+V E  V
Sbjct: 230 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV-ERGV 288

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
              V TYN++++ L   GR  E  E+ + M       D FTY   I+G CK GNV+ A  
Sbjct: 289 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALE 348

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           ++  M   G+    VTY ++I    + G+++E  +L++   R+G   ++V YN LI    
Sbjct: 349 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 408

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G +D A  I   + +K    D  T+  L+ GLC          +L        GR+ +
Sbjct: 409 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC----------LL--------GRVDE 450

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L++ M K G + +  T N+L++G+     +++A+ +  EM  KG +PT+++YN LI 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           GLCK  +  +A + VKEM+E G  PD  TY  LI GL 
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 25/407 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N+++            L ++ RMK       + +    +H L  A     A  ++ +M  
Sbjct: 92  NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 147

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
             + +   T+N M+   C AGK     EL   M R    N V+YN +I G    G+V  A
Sbjct: 148 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP---NAVTYNTVIAGFCSRGRVQAA 204

Query: 330 ISIWELLREKNCNADST-THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           + I   +RE+   A +  T+G +I+G CK G +++A+++ +E+   GE            
Sbjct: 205 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE------------ 252

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
                 K  A   N+L+ G+    KL+ A+     M  +G + TV +YN L++ L    R
Sbjct: 253 -----VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 307

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EAY  V+EM  KG   D+ TY++LING C+   +  AL++     ++G    V  Y  
Sbjct: 308 GTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI+ L   G+V++  +L+    +R   P+LV YN L++    +G+ D+A EI   + ++R
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + PD ++YN  ++GLC   R+ +A + +++   RGI P  +T++ L+
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 152/308 (49%), Gaps = 11/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +VI  + K    D+A+ VF  M           ++    G  C + + + A  + + + E
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 285

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+   V +Y  +++ L   G    A  + +EM  +G+  +V  YNILI+G  K+G+  +
Sbjct: 286 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKK 345

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E +     V   VVTY  +I  L K G+  E  +++D   +     D   Y + I
Sbjct: 346 ALEIFENMS-RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +    +GN++ A  +  EM +  I  D VTYN ++ G C  G++ E  +L + M ++G  
Sbjct: 405 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN LI G    G V +A+ I   +  K  N    T+  LI GLCKNG  + A  +
Sbjct: 465 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 524

Query: 368 LNEVEEGG 375
           + E+ E G
Sbjct: 525 VKEMVENG 532



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 402 NSLMNGFIQASKL----ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           +SL N  + AS        ++ L+  M       +  S + L++ L        A++   
Sbjct: 88  SSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPS----APAFALFA 143

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M          T+++++  LC + K   AL+L  Q  +    P+   YN +I G CS G
Sbjct: 144 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 199

Query: 518 KVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIIS 575
           +V+ AL +   M++R  + PN  TY T++ G  K G  D+A+++++ +L +  ++P+ + 
Sbjct: 200 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 259

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G C   ++  A  + +  + RG+  T  T+++LV A+  +G  T
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 309


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 255/514 (49%), Gaps = 53/514 (10%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVV-------------------- 55
           +  + AL LF S +R    A +P L+  I+  L   KL                      
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR 107

Query: 56  ---HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA----- 107
               V  +L  +E  K + P    + +I A+ +  + ++AL V+ +M+ +   +A     
Sbjct: 108 ICCSVFNVLSRLESSK-FTPNVFGVLII-AFSEMGLVEEALWVYYKMDVLPAMQACNMVL 165

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             L +K +F+   +    +  +G  P+V +YGT+I+G  + GD L A  +FDEM E+ + 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             VV Y ILI G   +     A+ ++ R +  + + PN+ TYN M++G CK     + LE
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMF-RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++  M  +    +  T+   I GLCK   +  A +   +M   G+  +   YN +IDG+C
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +AG + E   L   + +   L +V +Y+ILI+GL    +++EA  + + +++K    ++ 
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI+G CK G + KAI++ +++ E                   G + N  T ++L++
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTE------------------KGIEPNIITFSTLID 446

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G+ +A K+E A+ L+ EM  KG  P VV+Y  LI+G  K     EA+   KEM E G  P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           ++ T S LI+GLC+  +I  A+KL   FL K  T
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKL---FLAKTGT 537



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 221/425 (52%), Gaps = 23/425 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           + +LI  F + G  +  + +W    M+  V P +   N++++GL K GRFD   +++  M
Sbjct: 129 FGVLIIAFSEMG--LVEEALWVYYKMD--VLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  +  TY + I G C+ G+   A R++ EM+E  IF   V Y  +I G C   +I
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRI 244

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            E   ++  M   G L N+ +YN ++ G  +   V +A+ +++ +       +  T G+L
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGIL 304

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+GLCK   +  A + L            D AS        G   N +  N L++G+ +A
Sbjct: 305 IDGLCKTDEMVSARKFL-----------IDMASF-------GVVPNIFVYNCLIDGYCKA 346

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L  A+ L  E+ +    P V +Y+ LI GLC V+R  EA   ++EM +KG+ P+ +TY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+G C+   ++ A+++C Q  +KG  P++  ++ LI G C AGK+E A+ LY+ M  
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +  +P++V Y  L+DG FK G+  +A  +   + E  L P++ + +  + GLC   R+SD
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 592 AFEFL 596
           A +  
Sbjct: 527 AIKLF 531



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 219/444 (49%), Gaps = 43/444 (9%)

Query: 219 CGRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV--------- 268
           C   ++ LE++  + ++ +  K+   Y + IH L  A     A  + R+++         
Sbjct: 47  CRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRS 106

Query: 269 -------------ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI 315
                        ES  F   V +  +I  F   G ++E   LW          + + N+
Sbjct: 107 RICCSVFNVLSRLESSKFTPNV-FGVLIIAFSEMGLVEEA--LWVYYKMDVLPAMQACNM 163

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG- 374
           ++ GL++ G+ D    ++  +  +  + +  T+G LI+G C+ G   KA ++ +E+ E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 375 ----------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                           GE R+++A S+   M   G   N YT N++M+G+ + + ++ A+
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L++EM   G  P VV++  LI+GLCK +    A  F+ +M   G  P++  Y+ LI+G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++  +  AL L  +  +    PDV  Y+ILI GLC   ++E+A  L   MKK+  +PN 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTYNTL+DG  K G+ +KA+E+ + + E+ + P+II+++  + G C   +M  A     +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            + +G+LP  + +  L+     +G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDG 487



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 224/516 (43%), Gaps = 65/516 (12%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C++   EKA    + + EKG++P++ ++ T+I+G  K+G +  A+ ++ EM  +G+  +V
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW- 229
           V Y  LIDG FK G+   A  + + +  E  ++PNV T + +I+GLCK GR  + ++++ 
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532

Query: 230 -------DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
                     K NE ++  +  CS             A  ++R + E  I V  VT    
Sbjct: 533 AKTGTDTTGSKTNELDRSLYQMCSL------------ALSLFRGISEPCICVIRVT---- 576

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
              F    + K              L     N  ++  L++    + +  + +L  KN  
Sbjct: 577 -KLFATNNQPKAHLHTH--------LKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKN-- 625

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
             S     L+  L       KA  + + + EG +      A ++N     G +   +   
Sbjct: 626 PSSIDSFSLMFAL-------KACTLKSSLVEGKQMH----ALVIN----FGFEPIIFLQT 670

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL++ +     + +A  +F E+  K     ++S+ ++I+     +R  +A    ++M   
Sbjct: 671 SLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMD 726

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
             +PD++T ++ ++       +DM   +      +G   D+ + N LI+     G++  A
Sbjct: 727 DVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 786

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLK 581
            +          +PN VT+  ++      G  ++  + +  + E+  LRP I  +   + 
Sbjct: 787 RRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVD 840

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            LC    +++A+EF+   L   + P  + W  L+ A
Sbjct: 841 LLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGA 873


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 215/414 (51%), Gaps = 22/414 (5%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           S   V++G  K+G +  A  + DEM   GV+ N  CYN L+D + ++ +  R  E+ +  
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE- 193

Query: 197 VMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            ME+  V P V TY ++++GL   G   +   ++D +K+     D + Y + I+  C+AG
Sbjct: 194 -MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG 252

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
           NV  A  V+ E V +GI  +  TY A+I+GFC+ G+I+    L   M  +G   N + +N
Sbjct: 253 NVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFN 312

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I G   +G VD+A+ I  ++       D  T+  L  GLC+                 
Sbjct: 313 TMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCR----------------- 355

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
              R+ DA  L++ M ++G + N  +  +L++   +   +  A  LF++M  KG  P+VV
Sbjct: 356 -VNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVV 414

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YN +I+G  K     EA  F KEM +KG  PD+ TY+ L++G C + K+D+AL+L  + 
Sbjct: 415 TYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEM 474

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            Q+G  P+V  Y  LI GL   G+ E+A Q Y NM      P+   Y+ L+  L
Sbjct: 475 KQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 200/405 (49%), Gaps = 20/405 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  + + A+R L+ +   G+K +   Y  +++   +  +      V  EM   GVE  
Sbjct: 143 FCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT 202

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y IL+DG    GD  + + +++  +   +V  +V  Y+ +IN  C+ G      E++
Sbjct: 203 VGTYTILVDGLSTAGDISKVESVFDE-IKRKNVAGDVYFYSAVINAYCRAGNVRRASEVF 261

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D    N  E +  TY + I+G CK G +E AE +  +M   G+  + + +N MIDG+CR 
Sbjct: 262 DECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRH 321

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +  E+  VM R G  L+V +YN L  GL    ++++A  +  ++ E    ++  ++
Sbjct: 322 GMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSY 381

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+   K                  EG + +A  L   M+  G + +  T N +++G+
Sbjct: 382 TTLISIHSK------------------EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 423

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           I++  +  A    KEM +KG  P V +Y  L++G C   +   A    +EM ++G KP++
Sbjct: 424 IKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNV 483

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           + Y+ LI+GL +  + + A +     L  G TPD T+Y++L+  L
Sbjct: 484 VAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 22/388 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G CKAG ++ A R+  EM   G+ ++A  YN ++D + R        E+ + M   G 
Sbjct: 140 VDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGV 199

Query: 308 LNVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
              V +Y IL+ GL   G + +  S+++ ++ KN   D   +  +IN  C+ G + +A +
Sbjct: 200 EPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASE 259

Query: 367 ILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + +E V  G E                G++  A  L+  M   G   N    N++++G+ 
Sbjct: 260 VFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYC 319

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   ++ A+ +   M R G    V +YNTL  GLC+V R  +A   +  M E G + + +
Sbjct: 320 RHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYV 379

Query: 470 TYSLLINGLCQSKKIDM--ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +Y+ LI+    SK+ DM  A +L      KG  P V  YN++I G   +G + +A +   
Sbjct: 380 SYTTLIS--IHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKK 437

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+K+  VP++ TY  L+ G    G  D AL ++  + +   +P++++Y   + GL    
Sbjct: 438 EMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEG 497

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R  +AF+F ++ L  G+ P    + +LV
Sbjct: 498 RSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 158/350 (45%), Gaps = 19/350 (5%)

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
           +  ++ + ++DGFC+AG++ +   L + M R G  LN   YN L+              +
Sbjct: 131 ITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEV 190

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            + +          T+ +L++GL   G ++K   + +E++                  + 
Sbjct: 191 LKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK------------------RK 232

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               + Y  ++++N + +A  +  A  +F E    G  P   +Y  LING CK+ +   A
Sbjct: 233 NVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAA 292

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              + +M  +G   + I ++ +I+G C+   +D AL++     + G   DV  YN L  G
Sbjct: 293 EMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACG 352

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC   ++EDA +L   M +     N V+Y TL+    K GD  +A  ++  +  +  RP 
Sbjct: 353 LCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPS 412

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +++YN+ + G      + +A  F  +   +G++P   T+  LV     NG
Sbjct: 413 VVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 117/214 (54%), Gaps = 9/214 (4%)

Query: 78  SVIQAYGKNSMPDKALD---VFQRMN-----EIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y ++ M DKAL+   V +RM        +   A  LCR  + E AK+ L+ + E 
Sbjct: 313 TMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTEN 372

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++ +  SY T+I+   K GD++ A  +F +M  +G   +VV YN++IDG+ K G  +R 
Sbjct: 373 GVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS-IRE 431

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E +++ + +  + P+V TY  +++G C  G+ D  L +++ MK+   + +   Y + I 
Sbjct: 432 AERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALIS 491

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           GL K G  E A + Y  M+ +G+  D   Y+ ++
Sbjct: 492 GLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 10/287 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQR-------MNE-IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +VI AY +     +A +VF          NE  +G      C+  Q E A+  L  +  +
Sbjct: 243 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLR 302

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  +   + T+I+G  + G +  AL +   M   G++ +V  YN L  G  +      A
Sbjct: 303 GVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDA 362

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K++   ++ E  V  N V+Y  +I+   K G   E   ++  M+         TY   I 
Sbjct: 363 KKLLH-IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 421

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G  K+G++  AER  +EM + G+  D  TY A++ G C  GK+     L+E M ++G   
Sbjct: 422 GYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKP 481

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           NVV+Y  LI GL + G+ +EA   ++ +       D T + +L+  L
Sbjct: 482 NVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
              +A+RF   + +KGL PDVY+Y  +++G   +G +  AL +F+EM +RG + NVV Y 
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
            LI G  K+G    A + ++ + +   + P+   Y++++  L    R DE
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNM-LAAGLTPDDTLYSMLVGSLHTDKRKDE 536


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 260/536 (48%), Gaps = 56/536 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           ++ A  + ++PD+AL VF R+ E+                              P + + 
Sbjct: 112 LVIALSQMALPDEALSVFGRLREL------------------------------PALPAC 141

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +++GLVK+  L     +FDEM  RG+  +VV YN LI+    +GD  +A E+W+++V 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              + PNVVTY  MI  LC+     +   ++  MK+     + +TY + +    K  N++
Sbjct: 202 R-RIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIK 260

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILI 317
            A   Y ++++ G+  + V +  +IDG C+A +I E   ++  M R      V  YN LI
Sbjct: 261 HALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLI 320

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G   +G   EA++ ++ +  K    D  T  +++ GLC  G +  A + L EV      
Sbjct: 321 HGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFL-EV------ 373

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      M + G  LNA   N L++ + ++  L+ A+     MS  G  P VV+Y+
Sbjct: 374 -----------MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYS 422

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           +LI+G  K      A +   EM+ KG +P+++TY+ LI+G  ++  +D A  L  +  +K
Sbjct: 423 SLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEK 482

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL---YSNMKKRNCVP---NLVTYNTLMDGLFKT 551
           G   +    ++L+ GLC   +V+DA++    YS  KK    P   N VTY TL+ GL+  
Sbjct: 483 GIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYID 542

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           G  ++A   ++ + +  + PD  +Y + ++GLC    + +A     D +  G+ PT
Sbjct: 543 GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 196/407 (48%), Gaps = 24/407 (5%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAERVYREMVE 269
           V++  L +    DE L ++ R+    RE  +   C + + GL KA  +     ++ EM+ 
Sbjct: 111 VLVIALSQMALPDEALSVFGRL----RELPALPACNAILDGLVKAHMLARVWELFDEMLG 166

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDE 328
            G+    VTYN +I+     G + + +E+W+ M  R+   NVV+Y  +I  L E   + +
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGD 226

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  ++  ++E     +  T+  L++   K   +  A+    +                  
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYD------------------ 268

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           + K G   N     +L++G  +A+++  A  +F +M R   +PTV  YN+LI+G  +   
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA +F +E++ K  +PD  T S+++ GLC   ++ +A +      Q G   +   YN+
Sbjct: 329 AQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI   C +G +++AL   + M +    PN+VTY++L+DG  K G+ + A+ I+  ++ + 
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P++++Y   + G      M  AF    +   +GI    IT  +LV
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 37/306 (12%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           S+I    ++    +AL  FQ +       + F C   +  LC   Q + A RFL  + + 
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  +  +Y  +I+   KSG+L  AL     M E GVE NVV Y+ LIDG  K G+   A
Sbjct: 378 GIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIA 437

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             I+  +V +  V PNVVTY  +I+G  K G  D    +   M++     ++ T    + 
Sbjct: 438 MAIYTEMVAK-GVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD 496

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           GLC+   V+                DAV +     G  ++ K                 N
Sbjct: 497 GLCRENRVQ----------------DAVRFIMEYSGQKKSEK------------NPSIAN 528

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  LI GL  +G+ +EA   +  +R+     D  T+ ++I GLC  GY+  A+ +  
Sbjct: 529 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 588

Query: 370 EVEEGG 375
           ++ + G
Sbjct: 589 DMVKVG 594


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 256/544 (47%), Gaps = 70/544 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  R+   A+R L++L E G   D  S+ T++ G  + G L  A  V +     G   N
Sbjct: 120 LCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGA-AN 177

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  LI+G+ + G    A      L+    V P+  TYN ++ GLC   ++++  E+ 
Sbjct: 178 VVTYTALINGYCRSGRLADALN----LIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELM 233

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +N    +  T+ + I   C+ G ++ A ++   M   G   D V Y+ +++GF   
Sbjct: 234 EEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQ 293

Query: 290 GKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           G++ +   L   M  K   N V YN  ++GL    +  +   +   +  K+C  +  T  
Sbjct: 294 GRVDDALVLLNTMLCKP--NTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFS 351

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +L + LC++G ++ A+++                  V +M K+GC+ +    N+L+N F 
Sbjct: 352 MLTSCLCQHGLVDCAMEV------------------VEQMQKYGCRPDVVIYNTLINYFS 393

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK---- 465
           +  ++++A+ L   M    C+P  +S+N  +  LC+ ER+ +    + +ML +       
Sbjct: 394 EQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEM 450

Query: 466 -------------------------------PDMITYSLLINGLCQSKKIDMALKLCCQF 494
                                          PD++TYS LING  +   ++ A++L   F
Sbjct: 451 TFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIEL---F 507

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
                 PD+  YN ++ GLC A + EDA +L +NM +++C PN +T+N L++ L + G  
Sbjct: 508 QSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFA 567

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D+A+E++  + E    PDI +YN  + G     R+ DA   L+   C+   P  I+++  
Sbjct: 568 DRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNST 624

Query: 615 VRAV 618
           ++ +
Sbjct: 625 LKGL 628



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 244/514 (47%), Gaps = 35/514 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +    + A R + S+      P V +   +I  L     L  A  V D + E G   +
Sbjct: 86  LVQLEDLDAALRLVGSM-PSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESG-SAD 143

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N L+ G+ + G    A+ + E    + S   NVVTY  +ING C+ GR  + L + 
Sbjct: 144 AVSHNTLVAGYCRDGRLADAERVLE--AAKVSGAANVVTYTALINGYCRSGRLADALNLI 201

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D++TY + + GLC A   E AE +  EM+ +    + VT+   I  FC+ 
Sbjct: 202 ASMPV---APDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQN 258

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    +L E M R GC  +VV Y+ L+ G  E G+VD+A+    LL    C  ++  +
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALV---LLNTMLCKPNTVCY 315

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
              + GLC                     R  D   L+  M +  C  N  T + L +  
Sbjct: 316 NAALKGLCM------------------AERWKDVGELIAEMVRKDCPPNEATFSMLTSCL 357

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            Q   ++ A+ + ++M + GC P VV YNTLIN   +  R  +A   +  ML     PD 
Sbjct: 358 CQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDT 414

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+++  +  LC++++     +L  Q L++        +NILI  LC  G V  A++++  
Sbjct: 415 ISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQ 474

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M K  C P++VTY++L++G  + G  + A+E++  +     +PDI SYN  LKGLC  +R
Sbjct: 475 MPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAAR 531

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             DA E + +   +   P  IT++IL+ ++   G
Sbjct: 532 WEDAGELIANMARKDCPPNEITFNILINSLCQKG 565



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 241/472 (51%), Gaps = 40/472 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  +Q+EKA+  +  +      P+  ++ T I    ++G L  A+ + + M   G   +
Sbjct: 220 LCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPD 279

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY--PNVVTYNVMINGLCKCGRFDECLE 227
           VV Y+ L++GF ++G       + + LV+  ++   PN V YN  + GLC   R+ +  E
Sbjct: 280 VVIYSTLVNGFSEQG------RVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGE 333

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +   M + +   +  T+      LC+ G V+ A  V  +M + G   D V YN +I+ F 
Sbjct: 334 LIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFS 393

Query: 288 RAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGK---VDEAISIWELLREKNCNAD 344
             G++ +   L + M      + +S+N  ++ L    +   V+E I+  ++LRE +C   
Sbjct: 394 EQGRVDDALMLLDSMLCNP--DTISFNAALKALCRTERWYDVEELIA--QMLRE-DCPLI 448

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T  +LI+ LC++G +N AI++  +                  M K+ C  +  T +SL
Sbjct: 449 EMTFNILIDSLCQHGLVNHAIEVFEQ------------------MPKYRCTPDIVTYSSL 490

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NGF +   +E+AI LF+ M    C P + SYN ++ GLC+  R+ +A   +  M  K  
Sbjct: 491 INGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDC 547

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+ IT+++LIN LCQ    D A+++  Q  + G TPD+  YN LI+G    G+++DAL 
Sbjct: 548 PPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALN 607

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           L S M   +C P+ ++YN+ + GL +     +A EI   +L ++  P+ +++
Sbjct: 608 LLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 216/444 (48%), Gaps = 33/444 (7%)

Query: 100 NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           NE+ F  +    C+    + A + L  +   G  PDV  Y T++NG  + G +  AL + 
Sbjct: 244 NEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLL 303

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           + M     + N VCYN  + G      +    E+   +V +    PN  T++++ + LC+
Sbjct: 304 NTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRK-DCPPNEATFSMLTSCLCQ 359

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  D  +E+ ++M+K     D   Y + I+   + G V+ A  +   M+ +    D ++
Sbjct: 360 HGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNP---DTIS 416

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +NA +   CR  +  +  EL   M R+ C L  +++NILI  L ++G V+ AI ++E + 
Sbjct: 417 FNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMP 476

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           +  C  D  T+  LING  + G +  AI++   +                      CK +
Sbjct: 477 KYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP---------------------CKPD 515

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            ++ N+++ G  +A++ E+A  L   M+RK C P  +++N LIN LC+      A    K
Sbjct: 516 IFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFK 575

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M E G  PD+ TY+ LING  +  ++D AL L      K   PD   YN  + GLC A 
Sbjct: 576 QMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNSTLKGLCRAE 632

Query: 518 KVEDALQLYSNMKKRNCVPNLVTY 541
           + ++A ++ + M ++ C PN VT+
Sbjct: 633 RWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 14/295 (4%)

Query: 61  LELIE-IQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM-----NEIFGCEAGILCR 112
           +E++E +QK  C  DV +  ++I  + +    D AL +   M        F      LCR
Sbjct: 367 MEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCR 426

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
             ++   +  +  +  +       ++  +I+ L + G +  A+ VF++M +     ++V 
Sbjct: 427 TERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVT 486

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y+ LI+GF ++G    A E+++ +       P++ +YN ++ GLC+  R+++  E+   M
Sbjct: 487 YSSLINGFSEQGLVESAIELFQSM----PCKPDIFSYNAVLKGLCRAARWEDAGELIANM 542

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            + +   +  T+   I+ LC+ G  + A  V+++M E G   D  TYNA+I+GF   G++
Sbjct: 543 ARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRL 602

Query: 293 KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            +   L   M  K   + +SYN  ++GL    +  EA  I   +  K C  +  T
Sbjct: 603 DDALNLLSTMSCKP--DAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVT 655


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 254/530 (47%), Gaps = 51/530 (9%)

Query: 59  RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------I 109
           +ILE ++      P      +I AY K+ M +KA++ F +M + FGC+           +
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD-FGCKPDVFTYNSILHV 175

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           + +K  F  A    N + +    P+  ++  ++NGL K+G    AL +FDEM ++G+  N
Sbjct: 176 MVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPN 235

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY---PNVVTYNVMINGLCKCGRFDECL 226
            + Y I++ G  +     R  ++  RL+    V    P+ +T N +++G CK G+ DE  
Sbjct: 236 TMIYTIILSGLCQAK---RTDDV-HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAF 291

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +    +K         Y S I GL +A   +  +   R+M ++GI  D V Y  +I GF
Sbjct: 292 ALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGF 351

Query: 287 CRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C  G +     +   M ++G   +   YN LI+G  + G +D+A S+   + + +C   S
Sbjct: 352 CEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTS 411

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ +LI G+C+NG L++A QI N+                  M+  GC  +  T N+L+
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQ------------------MENLGCSPSIMTFNALI 453

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTV--------------VSYNTLINGLCKVERFGE 451
           +G  +A +LE A  LF +M   G +P++               S  T++  LC+     +
Sbjct: 454 DGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILK 512

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           AY  + ++ + G  PD++TY++LING C++K I+ A KL  +   KG +PD   Y  LI 
Sbjct: 513 AYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           G     + EDA ++   M K  C P+   Y  LM    + G    A  +W
Sbjct: 573 GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 622



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 198/391 (50%), Gaps = 27/391 (6%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           VT+N++I+ L K   FD   ++ + +K +  +    T+   I    K+G  E A   + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-----EVMGRKGCLNVVSYNILIRGLL 321
           M + G   D  TYN+++    +    KE F L      +++      N  ++ IL+ GL 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQ----KEVFLLALAVYNQMLKLNYNPNRATFVILLNGLC 212

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           +NGK D+A+ +++ + +K    ++  + ++++GLC+                    R  D
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ------------------AKRTDD 254

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
              L+N M   GC  ++ TCN+L++GF +  +++ A  L +   ++G    +  Y++LI+
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL + +R+ E   + ++M + G +PD++ Y++LI G C+   +D AL +     Q+G +P
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D   YN LI G C  G ++ A  L   + K +C P   TY  L+ G+ + G  D+A +I+
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           N +      P I+++N  + GLC    + +A
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEA 465



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 264/562 (46%), Gaps = 44/562 (7%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           LLN L        AL +FD  T++ G   +  ++  IL  L   K    V R+L  +++ 
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQK-GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVS 265

Query: 68  KCYCPEDVAL-SVIQAYGKNSMPDKA---LDVFQRMNEIFGCEA-----GILCRKRQFEK 118
            C CP+ +   +++  + K    D+A   L +F++   + G +        L R +++++
Sbjct: 266 GC-CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            + +   +++ G++PDV  Y  +I G  + G +  AL + ++M +RG+  +  CYN LI 
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           GF   G   +A+ + +  + +   +P   TY ++I G+C+ G  DE  +++++M+     
Sbjct: 385 GFCDVGLLDKARSL-QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCS 443

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREM---VESGIFV----------DAVTYNAMIDG 285
               T+ + I GLCKAG +E A  ++ +M       +F+          D  +   M++ 
Sbjct: 444 PSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVER 503

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C +G I + ++L   +   G + ++++YN+LI G  +   ++ A  ++  L+ K  + D
Sbjct: 504 LCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPD 563

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVN 387
           S T+G LI+G  +      A ++L+++ + G                 +G+L+ A SL  
Sbjct: 564 SVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWL 623

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +  +        T   L     +  +LE A+    EM+ K  +  +  Y   + GLC+  
Sbjct: 624 KYLRSLPSQEDETLK-LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR 682

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           R  EA      + E     +  +  +LINGLC+   ++MA+ +    L+KGF     + N
Sbjct: 683 RSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICN 742

Query: 508 ILIHGLCSAGKVEDALQLYSNM 529
            L+  L    K++ AL L + M
Sbjct: 743 QLLRSLILQDKMKHALDLLNRM 764



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 19/327 (5%)

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           F +W    R+   + V++N++I  L ++   D    I E L+  N      T  VLI   
Sbjct: 83  FFIWTTR-RRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAY 141

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            K+G   KA++                     +M   GCK + +T NS+++  +Q     
Sbjct: 142 AKSGMAEKAVESFG------------------KMKDFGCKPDVFTYNSILHVMVQKEVFL 183

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+ ++ +M +   +P   ++  L+NGLCK  +  +A     EM +KG  P+ + Y++++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +GLCQ+K+ D   +L       G  PD    N L+ G C  G++++A  L    +K   V
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
             +  Y++L+DGLF+    D+  E    + +  + PD++ Y I ++G C    +  A   
Sbjct: 304 LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           LND   RG+ P T  ++ L++   + G
Sbjct: 364 LNDMTQRGLSPDTYCYNALIKGFCDVG 390



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 33/230 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+ +    A +    L  KG  PD  +YGT+I+G  +      A  V D+M + G   +
Sbjct: 539 FCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPS 598

Query: 170 VVCYNILIDGFFKKGD----------YMR------------AKEIWERLVMETSVY---- 203
              Y  L+    +KG           Y+R            A+E +E+  +E +V     
Sbjct: 599 SAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLE 658

Query: 204 -------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
                    +  Y + + GLC+  R +E L+++  +K+ + + +  +    I+GLCK GN
Sbjct: 659 MNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGN 718

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
           +E A  ++   +E G  +     N ++       K+K   +L   M   G
Sbjct: 719 LEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 768


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 247/517 (47%), Gaps = 22/517 (4%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-- 165
           G+   KR  E      + + E G  PD  SY TV+  +   G    AL +     ++G  
Sbjct: 147 GLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGG 206

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
              NVV Y+ ++ G FK+G    A +++  +  +  V PNVVTYN +I+ LCK    D+ 
Sbjct: 207 CPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQ-GVPPNVVTYNSVIHALCKARAVDKA 265

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             +  +M  N  + D+ TY + IHG    G  + A R+++EM   G+  + VT +  +  
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAF 325

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G+I+E  E ++ M  KG  LN++SY+ L+ G    G + +  +++ L+       +
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
                +L+NG  K G + +A+ I  +                  M K G   +  T  ++
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFED------------------MQKRGLNPDVLTYLAV 427

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++ F +   +++A+  F  M  KG  P    Y  LI G C      +A   V E+  KG 
Sbjct: 428 IHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGL 487

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P +++++ LIN LC+  ++  A ++    ++ G   DV ++  LI G C  GK+ +A +
Sbjct: 488 GPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFR 547

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           ++  M      P++VTY TL++G  K G  D  L ++  +L + ++P   +Y I L GL 
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
              R + A E   + +  GI  T  T+ IL+  +  N
Sbjct: 608 HAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRN 644



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 264/552 (47%), Gaps = 33/552 (5%)

Query: 89  PDKALDVFQRMNEIFGCEAGI------------LCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           P  A+ +F RM+   G    +             CR R+ + A  F   L  +G+K DV 
Sbjct: 80  PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 137 SYGTVINGLVKSGDLLGALAV-FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
              +++ GL  +     A+ V F  M E G   + + Y+ ++      G    A +I   
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 196 LVMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            V +    P NVV Y+ +++GL K G+  E  +++  M +     +  TY S IH LCKA
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             V+ A+ + R+MV +G+  D VTYN +I G+   G+ K+   +++ M  +G + N V+ 
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           +  +  L ++G+++EA   ++ +  K    +  ++  L++G    G L            
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCL------------ 367

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                  D ++L N M + G   N +  N L+NG+ +   +  A+F+F++M ++G +P V
Sbjct: 368 ------VDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDV 421

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           ++Y  +I+  C++    +A      M++KG +P+   Y  LI G C    +  A +L  +
Sbjct: 422 LTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYE 481

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
              KG  P +  +  LI+ LC  G+V +A +++  + +     ++  + +L+DG    G 
Sbjct: 482 IRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGK 541

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A  + + ++   + PDI++Y   + G C   R+ D      + L +G+ PTT T+ I
Sbjct: 542 MSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGI 601

Query: 614 LVRAVMNNGAST 625
           ++  + + G + 
Sbjct: 602 ILDGLFHAGRTA 613



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 261/531 (49%), Gaps = 19/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L ++ +  +A    + + ++G+ P+V +Y +VI+ L K+  +  A  +  +M   GV+ +
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI G+   G + +A  +++ +     V PN VT +  +  LCK GR +E  E +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMT-SRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M     + +  +Y + +HG   AG +     ++  MV  GI  +   +N +++G+ + 
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++E   ++E M ++G   +V++Y  +I      G +D+A+  +  + +K    +   +
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G C +G L KA +++ E+   G                 EGR+ +A  + + + +
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +     SL++G+    K+  A  +   M   G  P +V+Y TL+NG CK  R  +
Sbjct: 520 TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDD 579

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
                +E+L KG KP   TY ++++GL  + +   A ++  + ++ G    +  Y+IL+ 
Sbjct: 580 GLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLT 639

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GLC     E+A+ ++  +   N   ++V  N ++  +FK    ++A  ++  I +  L P
Sbjct: 640 GLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVP 699

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + +Y I ++ L     + +A    +  L  G+ PT+   +++VR ++  G
Sbjct: 700 TVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKG 750



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 247/561 (44%), Gaps = 64/561 (11%)

Query: 60  ILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGI 109
           IL +   Q   CP +V +  +V+    K     +A D+F  M +         +      
Sbjct: 196 ILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHA 255

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVING------------------------- 144
           LC+ R  +KA+  L  +   G++PD  +Y T+I+G                         
Sbjct: 256 LCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPN 315

Query: 145 ----------LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
                     L K G +  A   FD M  +G + N++ Y+ L+ G+   G  +    ++ 
Sbjct: 316 TVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFN 375

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            L++   + PN   +N+++NG  KCG   E + +++ M+K     D  TY + IH  C+ 
Sbjct: 376 -LMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRM 434

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSY 313
           G+++ A   +  M++ G+  +   Y  +I GFC  G + +  EL +E+  +     ++S+
Sbjct: 435 GSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI  L + G+V EA  I++++      AD      LI+G C  G +++A ++ + +  
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS 554

Query: 374 GG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                  GR+ D   L   +   G K   +T   +++G   A +   
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAA 614

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A  +F+EM   G + T+ +Y+ L+ GLC+     EA +  +++     K D++  +++I+
Sbjct: 615 AKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMIS 674

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            + ++++ + A  L       G  P V  Y I++  L   G VE+A  ++S M K    P
Sbjct: 675 KMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSP 734

Query: 537 NLVTYNTLMDGLFKTGDCDKA 557
                N ++  L + G+  KA
Sbjct: 735 TSHFINVIVRTLLEKGEIVKA 755



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 84/222 (37%), Gaps = 34/222 (15%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + +        L  KG+KP  ++YG +++GL  +G    A  +F EM E G+   +
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERL---------------------------------- 196
             Y+IL+ G  +      A  ++++L                                  
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + +  + P V TY +M+  L K G  +E   ++  M K+     S      +  L + G 
Sbjct: 692 IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGE 751

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
           +  A      +    I  +A T + ++  F   GK +E   L
Sbjct: 752 IVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 220/447 (49%), Gaps = 26/447 (5%)

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           ++ L+ S     A A+F +++   +      +NI++      G  +RA E+  ++     
Sbjct: 88  LHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM----- 142

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSFIHGLCKAGNVEGA 260
             PN VTYN +I G C  GR    LE+   M+ +     D +TY + I G CK G +E A
Sbjct: 143 PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202

Query: 261 ERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
            +V+ EM+  G +   AV YNA+I G+C  GK+    +  E M ++G  + V +YN+L+ 
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
            L  + +  +A ++ E +++   + D  T+ +LING CK G   KA+++  E        
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEE-------- 314

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                     M + G +  A T  SL+  F +  +++    LF    +KG  P VV YN 
Sbjct: 315 ----------MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LIN  C       AY  + EM +K   PD +TY+ L+ G C   ++D A  L  +  ++G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+  YN LI G    G ++DAL++   M  +   P L+TYN L+ GL K    D A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484

Query: 559 EIWNHILEERLRPDIISYNITLKGLCS 585
            +   ++ + + PD  +Y   ++GL +
Sbjct: 485 NLMKEMVAKGITPDDSTYISLIEGLTT 511



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 213/416 (51%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  V R
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--CLNVVSYNILIRGLLE 322
           EM E  GI  D  TY  +I G+C+ G++++  ++++ M  KG    + V YN LI G  +
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   E + ++       T+ +L++ L  +                   R +DA
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDA------------------RASDA 273

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            +++  M K+G   + +T N L+NG+ +    + A+ +F+EMS+KG   T V+Y +LI  
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYV 333

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
             +  +  E        ++KG +PD++ Y+ LIN  C    ++ A ++  +  +K   PD
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ G C  G++++A  L   M KR   P+LV+YNTL+ G    GD   AL + +
Sbjct: 394 DMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRD 453

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++++   P +++YN  ++GLC   +  DA   + + + +GI P   T+  L+  +
Sbjct: 454 EMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 217/422 (51%), Gaps = 29/422 (6%)

Query: 64  IEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE----IFGCEAGILCRKRQFEKA 119
           + +  C    ++ L  + A GK   P +AL++ ++M       +       C + + + A
Sbjct: 110 LRLPLCTTTFNIMLRHLCATGK---PVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAA 166

Query: 120 KRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILI 177
              +  + E+G + PD Y+Y T+I+G  K G +  A+ VFDEM  +G V  + V YN LI
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALI 226

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            G+   G    A +  E +V +  +   V TYN++++ L    R  +   + + M+KN  
Sbjct: 227 GGYCDVGKLDVALQYREDMV-QRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGF 285

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             D FTY   I+G CK GN + A  V+ EM + G+   AVTY ++I  F R G+++E   
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDR 345

Query: 298 LWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+ V  +KG   +VV YN LI      G ++ A  I   + +K    D  T+  L+ G C
Sbjct: 346 LFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFC 405

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
                     +L        GRL +A +L++ M K G + +  + N+L++G+     +++
Sbjct: 406 ----------LL--------GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKD 447

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+ +  EM  KG +PT+++YN LI GLCK+ +  +A + +KEM+ KG  PD  TY  LI 
Sbjct: 448 ALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIE 507

Query: 477 GL 478
           GL
Sbjct: 508 GL 509



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 194/398 (48%), Gaps = 23/398 (5%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           ++  ++  L  +G  + AL +  +M       N V YN +I GF  +G    A E+   +
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAG 255
                + P+  TY  +I+G CK GR ++ ++++D M  K E    +  Y + I G C  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYN 314
            ++ A +   +MV+ GI +   TYN ++       +  + + + E M + G   +V +YN
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
           ILI G  + G   +A+ ++E + +K   A + T+  LI    + G + +  ++ N   + 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  G +  A  ++  M+K     +  T N+LM GF    +L+ A
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  EM+++G  P +VSYNTLI+G        +A     EM++KG+ P ++TY+ LI G
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           LC+ ++ D A  L  + + KG TPD + Y  LI GL +
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTT 511



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 9/144 (6%)

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           LL+     ++    +L+L  Q   K  +  + + ++  H L S+     A  L++++ + 
Sbjct: 55  LLLTASAAARPHATSLRLYAQL--KSLSVPIPVASL--HPLLSSLPSAPAFALFADIYRL 110

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
                  T+N ++  L  TG   +ALE    +L +  RP+ ++YN  + G C+  R+  A
Sbjct: 111 RLPLCTTTFNIMLRHLCATGKPVRALE----LLRQMPRPNAVTYNTVIAGFCARGRVQAA 166

Query: 593 FEFLNDALCR-GILPTTITWHILV 615
            E + +   R GI P   T+  L+
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLI 190


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 243/529 (45%), Gaps = 34/529 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K   E A      L  KG  P V +YG +ING  K GD      +  EM  RG+  NV
Sbjct: 250 CKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNV 309

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +ID  +K G  ++A E  E ++ E    P++VTYN +I+G C+ G+  E  ++ +
Sbjct: 310 QVYNTIIDARYKHGHIVKAVETIEGMI-ECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 368

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +        + F+Y   IH  CK G  + A     EM E G   D VTY A++ G   AG
Sbjct: 369 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 428

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++     + E M  +G   +   YNIL+ GL +  K+  A  +   + +++   D+  + 
Sbjct: 429 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 488

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L++G  +NG L++A ++     E                   G        N+++ G+ 
Sbjct: 489 TLVDGFIRNGNLDEARKLFELTIE------------------KGMNPGIVGYNAMIKGYC 530

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   +++A+     M ++  +P   +Y+T+I+G  K      A    +EM++   KP+++
Sbjct: 531 KFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVV 590

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LING C+   +  +LK+  +    G  P+V  Y+ILI   C   K+ DA   +  M
Sbjct: 591 TYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGD---CDKA-----------LEIWNHILEERLRPDIIS 575
               CVPN VT+N L++G  K G     +K            L  +  ++ +   P   +
Sbjct: 651 LMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAA 710

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           YN  L  LC       A +  N    +G +P ++++  L+  V   G S
Sbjct: 711 YNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRS 759



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 289/610 (47%), Gaps = 59/610 (9%)

Query: 16  KNPHTALALFDSATREPGYAHSP---HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP 72
           ++    L  FD  +R  G    P     +  +L+ L   ++   +  +LE + +++    
Sbjct: 71  RDVELGLKFFDWVSR--GQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPT 128

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
            +    VIQAY  + + +KAL+++  + + +                             
Sbjct: 129 REAMSIVIQAYSDSGLVEKALELYYFVLKTYT--------------------------YF 162

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFE------RGVETNVVCYNILIDGFFKKGDY 186
           PDV +  +++N LVK G +  A  ++DEM E      R V+    C  I++ G  K+G  
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC--IMVKGLCKEGKL 220

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
              +++ E    +  + PN++ YN +I+G CK G  +    ++  +K         TY +
Sbjct: 221 EEGRKLIEDRWGQGCI-PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGA 279

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I+G CK G+ +  +R+  EM   G+ V+   YN +ID   + G I +  E  E M   G
Sbjct: 280 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 339

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  ++V+YN LI G   +GKV EA  + E    K    +  ++  LI+  CK G  ++A 
Sbjct: 340 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
             L E+ E G                   K +  T  +L++G + A +++ A+ + ++M 
Sbjct: 400 NWLIEMTERGH------------------KPDLVTYGALVHGLVVAGEVDVALTIREKML 441

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +G  P    YN L++GLCK  +   A   + EML++   PD   Y+ L++G  ++  +D
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A KL    ++KG  P +  YN +I G C  G ++DA+   + MKKR+  P+  TY+T++
Sbjct: 502 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVI 561

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DG  K  D D A +++  +++ + +P++++Y   + G C    +  + +   +    G++
Sbjct: 562 DGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLV 621

Query: 606 PTTITWHILV 615
           P  +T+ IL+
Sbjct: 622 PNVVTYSILI 631



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 236/512 (46%), Gaps = 33/512 (6%)

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           E +G      C+K  F+   R L  +  +GL  +V  Y T+I+   K G ++ A+   + 
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M E G + ++V YN LI G  + G    A ++ E+  +   + PN  +Y  +I+  CK G
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ-ALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
            +D        M +   + D  TY + +HGL  AG V+ A  +  +M+E G+F DA  YN
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 281 AMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++ G C+  K+      L E++ +    +   Y  L+ G + NG +DEA  ++EL  EK
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEGRLADA 382
             N     +  +I G CK G +  A+  +N +++                   +  L  A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +   M K  CK N  T  SL+NGF +   L  ++ +F+EM   G  P VV+Y+ LI  
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC--------------QSKKIDMAL 488
            CK  +  +A SF +EML     P+ +T++ L+NG                Q  K  M L
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFL 693

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
               + +  G+ P    YN ++  LC  G    ALQL + M  + C+P+ V++  L+ G+
Sbjct: 694 NFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGV 753

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITL 580
              G   +   I +  L ER     ++Y+  L
Sbjct: 754 CLEGRSKEWKNIVSCNLNERELQIAVNYSSIL 785



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 24/424 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           N   Y+ ++  L +   F E   + + M+  E           I     +G VE A  +Y
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 265 REMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-----GRKGCLNVVSYNILIR 318
             ++++   F D +  N++++   + G+I+   +L++ M         C++  S  I+++
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL + GK++E   + E    + C  +   +  LI+G CK G +  A  +  E++  G   
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG--- 269

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                  +  ++ +G         +++NGF +    +    L  EM+ +G +  V  YNT
Sbjct: 270 ------FLPTVETYG---------AIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNT 314

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+   K     +A   ++ M+E G KPD++TY+ LI+G C+  K+  A +L  Q L KG
Sbjct: 315 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 374

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+   Y  LIH  C  G  + A      M +R   P+LVTY  L+ GL   G+ D AL
Sbjct: 375 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            I   +LE  + PD   YNI + GLC   ++  A   L + L + +LP    +  LV   
Sbjct: 435 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGF 494

Query: 619 MNNG 622
           + NG
Sbjct: 495 IRNG 498



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 27/286 (9%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
            L D   R      +  LF   + + ++P +V + + I       K YC   +    +  
Sbjct: 489 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI-------KGYCKFGMMKDAMAC 541

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
             +      A D F     I G       ++   + A++    + +   KP+V +Y ++I
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDG-----YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NG  + GDL  +L +F EM   G+  NVV Y+ILI  F K+   + A   +E ++M   V
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 203 YPNVVTYNVMINGLCKCG---------RFDE-----CLEMWDRMKKNEREKDSFTYCSFI 248
            PN VT+N ++NG  K G          F E      L  + RM  +     S  Y S +
Sbjct: 657 -PNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSIL 715

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
             LC+ G    A ++  +M   G   D+V++ A++ G C  G+ KE
Sbjct: 716 ICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 174/678 (25%), Positives = 305/678 (44%), Gaps = 78/678 (11%)

Query: 17  NPHTALALFDSATREPGYAHSPHLF--HHILRRLIDPKLVVHVSRILELIEIQKCYCPED 74
           +P   L  F+ A+++   ++S   F    +L+ L   ++   +  +LE ++  K   P  
Sbjct: 73  DPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMK-SKELIPTC 131

Query: 75  VALS-VIQAYGKNSMPDKAL-------DVFQRMNEIFGCEA--GILCRKRQFEKAKRFLN 124
            ALS VI AY  + +  +AL       DV   + ++F C +   +L    + E A++  +
Sbjct: 132 EALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYD 191

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            + ++    D Y+   V  GL K G +     + ++ + +G   N+V YN LIDG+ K G
Sbjct: 192 EMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNG 251

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC----LEMWDR--------- 231
           D  RA  +++ L ++    P V TY  MIN  CK G+F+      +EM +R         
Sbjct: 252 DIERANLLFKELKVK-GFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIF 310

Query: 232 ----------------------MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
                                 M ++  E D  TY + I+G C  G V  AE +    + 
Sbjct: 311 NGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIR 370

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDE 328
            G+F +  +Y  +I  F + G+     EL   M  +G  L++++Y  L+ GL+  G+VD 
Sbjct: 371 RGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDV 430

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------- 375
           A+++ + + E+    D+  + VL++GLCK G    A Q+L E+ +               
Sbjct: 431 ALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVD 490

Query: 376 ----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                G L +A  L     + G   +   CN+++ G+ +   + +A+  FK M     SP
Sbjct: 491 GFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSP 550

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +Y+T+I+G  K      A      ML+K  KP+++T++ LING C++  ++ A K+ 
Sbjct: 551 DEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVF 610

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF-- 549
            +    GF P+V  Y ILI   C  GK+  A   +  M    C+PN  T+N L++GL   
Sbjct: 611 EEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN 670

Query: 550 ---------KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
                         +  LE +  ++ +     I +YN  L  LC    +  A +  +  +
Sbjct: 671 NGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMM 730

Query: 601 CRGILPTTITWHILVRAV 618
            +G  P  +++  L+  +
Sbjct: 731 SKGFPPDPVSFIALLHGL 748



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/540 (25%), Positives = 248/540 (45%), Gaps = 51/540 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y KN   ++A  +F+ +         + +G      C+K +FE   + L  + E+
Sbjct: 242 TLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKER 301

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL   +  +  +I+   K G  + A      M E G E ++  YN LI+G   KG    A
Sbjct: 302 GLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREA 361

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +E+ E  +    ++PN  +Y  +I+   K G +    E+   M +     D   Y + +H
Sbjct: 362 EELLEHAI-RRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVH 420

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCL 308
           GL  AG V+ A  V  +M+E GI  DA  YN ++ G C+ G+     +L  E++ +    
Sbjct: 421 GLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTP 480

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +      L+ G + +G +DEA  +++L  E+  +        +I G CK G +N A+   
Sbjct: 481 DAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCF 540

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
             +  G           V+  D+       +T +++++G+++ + L  A+ +F  M +K 
Sbjct: 541 KRMFNG-----------VHSPDE-------FTYSTIIDGYVKQNDLRGALRMFGLMLKKT 582

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
           C P VV++ +LING C+      A    +EM   G++P+++TY++LI   C+  K+  A 
Sbjct: 583 CKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKAC 642

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV--------- 539
               Q L     P+   +N L++GL +     + + + S  K+ N  PNL          
Sbjct: 643 FFFEQMLINKCIPNDATFNYLVNGLTN----NNGIAISS--KRSNSQPNLTLEFFGMMIS 696

Query: 540 --------TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                    YN+++  L +      AL++ + ++ +   PD +S+   L GLC   R+ D
Sbjct: 697 DGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 213/435 (48%), Gaps = 26/435 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A A+F +MF   +      +NI++      G   RA E+  ++       PN VTYN +I
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVI 79

Query: 214 NGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG- 271
            G C  GR    L++   M+ +     + +TY + I G CK G V+ A +V+ EM+  G 
Sbjct: 80  AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           +  +AV YNA+I G+C  GK+       + M  +G  + V +YN+L+  L  +G+  EA 
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + E +  K    D  T+ +LING CK G + KA++I                     M 
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN------------------MS 241

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G +    T  SL+    +  +++    LF E  R+G  P +V YN LIN         
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A+  + EM +K   PD +TY+ L+ GLC   ++D A KL  +  ++G  PD+  YN LI
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            G    G V+DAL++ + M  +   P L+TYN L+ GL K G  D A  +   ++E  + 
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421

Query: 571 PDIISYNITLKGLCS 585
           PD  +Y   ++GL +
Sbjct: 422 PDDSTYISLIEGLTT 436



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 210/416 (50%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  + R
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLE 322
           EM E  GI  +  TY  +I G+C+ G++ E  ++++ M  KG +    V YN LI G  +
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   + + E+       T+ +L++ L                    +GR  +A
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM------------------DGRGTEA 198

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             LV  M   G   + +T N L+NG  +   ++ A+ +F+ MSR+G   TVV+Y +LI  
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 258

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  E      E + +G +PD++ Y+ LIN    S  ID A ++  +  +K   PD
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ GLC  G+V++A +L   M KR   P+LVTYNTL+ G    GD   AL I N
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 378

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++ +   P +++YN  ++GLC   +  DA   + + +  GI P   T+  L+  +
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 206/398 (51%), Gaps = 26/398 (6%)

Query: 89  PDKALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVIN 143
           P +AL++ ++M       +       C + + + A   +  + E+G + P+ Y+YGTVI+
Sbjct: 57  PARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 116

Query: 144 GLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           G  K G +  A+ VFDEM  +G V+   V YN LI G+  +G    A    +R+V E  V
Sbjct: 117 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV-ERGV 175

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
              V TYN++++ L   GR  E  E+ + M       D FTY   I+G CK GNV+ A  
Sbjct: 176 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE 235

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           ++  M   G+    VTY ++I    + G+++E  +L++   R+G   ++V YN LI    
Sbjct: 236 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 295

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G +D A  I   + +K    D  T+  L+ GLC          +L        GR+ +
Sbjct: 296 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC----------LL--------GRVDE 337

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L++ M K G + +  T N+L++G+     +++A+ +  EM  KG +PT+++YN LI 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           GLCK  +  +A + VKEM+E G  PD  TY  LI GL 
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 21/369 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +H L  A     A  ++ +M    + +   T+N M+   C AGK     EL   M R   
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-- 70

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA-DSTTHGVLINGLCKNGYLNKAIQ 366
            N V+YN +I G    G+V  A+ I   +RE+   A +  T+G +I+G CK G +++A++
Sbjct: 71  -NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           + +E+   GE                  K  A   N+L+ G+    KL+ A+     M  
Sbjct: 130 VFDEMLTKGE-----------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G + TV +YN L++ L    R  EAY  V+EM  KG  PD+ TY++LING C+   +  
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL++     ++G    V  Y  LI+ L   G+V++  +L+    +R   P+LV YN L++
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
               +G+ D+A EI   + ++R+ PD ++YN  ++GLC   R+ +A + +++   RGI P
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352

Query: 607 TTITWHILV 615
             +T++ L+
Sbjct: 353 DLVTYNTLI 361



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 152/308 (49%), Gaps = 11/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +VI  + K    D+A+ VF  M           ++    G  C + + + A  + + + E
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+   V +Y  +++ L   G    A  + +EM  +G+  +V  YNILI+G  K+G+  +
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E +     V   VVTY  +I  L K G+  E  +++D   +     D   Y + I
Sbjct: 233 ALEIFENMS-RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +    +GN++ A  +  EM +  I  D VTYN ++ G C  G++ E  +L + M ++G  
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN LI G    G V +A+ I   +  K  N    T+  LI GLCKNG  + A  +
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 411

Query: 368 LNEVEEGG 375
           + E+ E G
Sbjct: 412 VKEMVENG 419



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T+++++  LC + K   AL+L  Q  +    P+   YN +I G CS G+V+ AL +   M
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 530 KKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCS 587
           ++R  + PN  TY T++ G  K G  D+A+++++ +L +  ++P+ + YN  + G C   
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           ++  A  + +  + RG+  T  T+++LV A+  +G  T
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 196


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 254/498 (51%), Gaps = 30/498 (6%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDE-MFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           PD  +   +I+ L +SG+   A  + D  M   G++    C N L+ G  K  ++ +   
Sbjct: 115 PDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPC-NALLTGLGKAREFGKMN- 172

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE------KDSFTYC 245
           +  R + + ++ P V+T+ ++IN LCK  R D+ LE++++MK  + E       D+  Y 
Sbjct: 173 LLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYN 232

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + I GLCK G  E A  +  +M          T+N +I+G+CR+G+I+   +L+  M   
Sbjct: 233 TLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA 292

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
               NV++ N L+ G+ ++ ++  A+  + ++++K    ++ T+ V IN  C    +NKA
Sbjct: 293 QIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKA 352

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           ++ L+E+ + G                  GRL DA+S+V+++ + G  L+    N L++ 
Sbjct: 353 MEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISE 412

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKP 466
           F + +KL+ A     EM   G  P  V+YNTLI+   K+  F  A+ F+K+M E+ G  P
Sbjct: 413 FCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSP 472

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQF--LQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            + TY  LI+  C +  ID A+K+  +   +     P+  +YNILI  LC   +V  AL 
Sbjct: 473 TVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALS 532

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L  +MK R  +PN  TYN++   L      DKA ++ + ++E+   PD I+  I  + L 
Sbjct: 533 LLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLS 592

Query: 585 SCSRMSDAFEFLNDALCR 602
           +   ++   +F    + R
Sbjct: 593 AVGEITKLKKFTQGCMNR 610



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 40/515 (7%)

Query: 141 VINGLVKSGDLLGALAVFDEM------FERGVETNVVCYNIL--IDGFFKKGDYMRAKEI 192
           +IN L+KSG +  A+ V DEM      F    +T  + +N L  IDG   +   ++  EI
Sbjct: 45  IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGR---VKEDEI 101

Query: 193 WERLVM--ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
              +    + +++P+ +    +I+ LC+ G  +    + D +      KD+    + + G
Sbjct: 102 AGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTG 161

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKG--- 306
           L KA        + R+M +  I    +T+  +I+  C+  +I +  E++E M G K    
Sbjct: 162 LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETK 221

Query: 307 ---CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
                + + YN LI GL + G+ +EA+ +   +R   C   + T   LING C++G +  
Sbjct: 222 VFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEV 281

Query: 364 AIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           A ++ NE+E                      R++ A      M + G K N  T    +N
Sbjct: 282 AHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFIN 341

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            F   + +  A+    EMS+ GC P  V Y TLI GL +  R  +A S V ++ E G+  
Sbjct: 342 AFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCL 401

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D + Y++LI+  C+  K+D A +   +    G  PD   YN LI      G  + A +  
Sbjct: 402 DRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFM 461

Query: 527 SNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI--LEERLRPDIISYNITLKGL 583
             M ++    P + TY  L+       + D+A++I+  +  +  ++ P+ + YNI +  L
Sbjct: 462 KKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSL 521

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           C  ++++ A   L+D   RG++P T T++ + +A+
Sbjct: 522 CKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL 556



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 221/482 (45%), Gaps = 41/482 (8%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM-ETSVYPNVVTYNVM 212
           ALA F  +      TNV   N +I+   K G    A  + + +++ E+   PN  T  ++
Sbjct: 25  ALAAFSTLDSHAKNTNV--RNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIV 82

Query: 213 INGLCKC----GRF--DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
            N L K     GR   DE   +  +  K+    D+      I  LC++GN   A  +   
Sbjct: 83  FNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDN 142

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN----VVSYNILIRGLLE 322
           ++      DA   NA++ G    GK +E  ++  +M +   +N    V+++ ILI  L +
Sbjct: 143 LMMLNGLKDAAPCNALLTGL---GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCK 199

Query: 323 NGKVDEAISIWELLR-EKN-----CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
             ++D+A+ ++E ++ EK         D+  +  LI+GLCK                   
Sbjct: 200 FRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCK------------------V 241

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           GR  +A  L+ +M    C     T N L+NG+ ++ ++E A  LF EM      P V++ 
Sbjct: 242 GRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITL 301

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NTL++G+CK  R   A  F + M +KG K + +TY++ IN  C    ++ A++   +  +
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PD  +Y  LI GL  AG+++DA  + S +K+     + V YN L+    K    D+
Sbjct: 362 DGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDR 421

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL-CRGILPTTITWHILV 615
           A E  N +    ++PD ++YN  +           A +F+       G+ PT  T+  L+
Sbjct: 422 AQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALI 481

Query: 616 RA 617
            A
Sbjct: 482 HA 483



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 26/143 (18%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           ++I AY  N+  D+A+ +F+ MN +                            + P+   
Sbjct: 479 ALIHAYCLNNNIDEAIKIFKEMNNV-------------------------ASKVPPNTVI 513

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  +I+ L K   +  AL++ D+M  RGV  N   YN +      K    +A ++ +R+V
Sbjct: 514 YNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMV 573

Query: 198 METSVYPNVVTYNVMINGLCKCG 220
            E +  P+ +T  ++   L   G
Sbjct: 574 -EQACNPDYITMEILTEWLSAVG 595


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 276/565 (48%), Gaps = 52/565 (9%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEK 118
           P D+    +I +  +N + D+A+ V  +M            NEI  C A       +  +
Sbjct: 236 PNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLA-------ELGR 288

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
            +  L+   +   KPD++SY TV+ GL + G    A  +   M  +    + V +N +I 
Sbjct: 289 VEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVIS 348

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
               +G    A E+ E++  +    P+  TY+ ++N L + G  D+ LE+   ++    +
Sbjct: 349 YLCHRGLVDCAMEVVEQMP-KYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWK 404

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            ++  Y S + GLC+A   +   ++  EM+ + + +D VT+  +ID  C+ G +    E+
Sbjct: 405 PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEV 464

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
              M + GC  +++ YN LI G  ENG VD+A+   EL +  +C  +  T+  ++ GLC+
Sbjct: 465 LREMTKFGCSPDIIIYNSLINGFSENGSVDDAL---ELFKNMSCKRNVVTYNYMLKGLCR 521

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               +  DA  LV  M K  C  N  T ++L++   Q   +E A
Sbjct: 522 ------------------AEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECA 563

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           I +F++M +  C P V+ Y+TLINGL   E   +A   + +M     KPD I YS  + G
Sbjct: 564 IEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKG 620

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC++++ + A +L  + ++K   PD   ++ILI+ LC  G +E A ++   M K  C+PN
Sbjct: 621 LCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPN 680

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           +  Y++L++G  +    + AL++  ++  E   PD I Y+  LKGLC   R  DA E + 
Sbjct: 681 VFIYSSLINGFAEQYRAEDALQLLRNMPCE---PDTICYSAALKGLCRAKRWEDARELIA 737

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
           +   +       T+ +L+ ++  NG
Sbjct: 738 EMFRKQCPLDEATFSMLIGSLCQNG 762



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 283/600 (47%), Gaps = 50/600 (8%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPK-----LVVH--- 56
           A+RL+  +    N +T   L         +  +  L   ++R    P      +++H   
Sbjct: 190 ARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLC 249

Query: 57  ----VSRILELI-EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMN---EIFGCE 106
                 R + ++ ++ KC C   V +   +I    +    ++AL +F +M    +IF   
Sbjct: 250 QNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYN 309

Query: 107 AGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
             +  LCR  ++E A   +  +  K   PD  ++ TVI+ L   G +  A+ V ++M + 
Sbjct: 310 TVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKY 369

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G + +   Y+ L++   ++G    A E+   +  +    PN V Y  ++ GLC+  R+D+
Sbjct: 370 GCKPDNFTYSALVNALSERGCVDDALELLRTIPWK----PNTVCYRSVLKGLCRADRWDD 425

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++   M +N+   D  T+   I  LC+ G V+    V REM + G   D + YN++I+
Sbjct: 426 VGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLIN 485

Query: 285 GFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           GF   G + +  EL++ M  K   NVV+YN +++GL    + ++A  +   + +  C  +
Sbjct: 486 GFSENGSVDDALELFKNMSCKR--NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPN 543

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   LI+ LC+ G++  AI++                    +M K+ C  N    ++L
Sbjct: 544 EVTFSTLISYLCQKGFVECAIEVFE------------------KMPKYNCMPNVIIYSTL 585

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG      +++A+ L  +M    C P  + Y+  + GLC+ ER+ +A   + EM+ K  
Sbjct: 586 INGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNC 642

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD +T+S+LIN LC    ++ A ++    L+    P+V +Y+ LI+G     + EDALQ
Sbjct: 643 LPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQ 702

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L  NM    C P+ + Y+  + GL +    + A E+   +  ++   D  ++++ +  LC
Sbjct: 703 LLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLC 759



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 253/513 (49%), Gaps = 35/513 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+ +   A+R +  +      P+ Y+  T++ GL  + +   A  +  EM   G   N 
Sbjct: 182 CREGRLNDARRLVADM---PFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPND 238

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + + ++I    + G   RA  + +++  +      V+ YN +I+ L + GR +E L ++D
Sbjct: 239 LTFGMIIHSLCQNGLADRAMGVLDQMS-KCRCTRGVIVYNEIISCLAELGRVEEALHLFD 297

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     + D F+Y + + GLC+ G  E A  +   MV      D VT+N +I   C  G
Sbjct: 298 QMPC---KPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRG 354

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    E+ E M + GC  +  +Y+ L+  L E G VD+A+   ELLR      ++  + 
Sbjct: 355 LVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDAL---ELLRTIPWKPNTVCYR 411

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            ++ GLC+                    R  D   LV  M ++   L+  T   +++   
Sbjct: 412 SVLKGLCR------------------ADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLC 453

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q   ++    + +EM++ GCSP ++ YN+LING  +     +A    K M     K +++
Sbjct: 454 QKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVV 510

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ ++ GLC++++ + A KL  + ++    P+   ++ LI  LC  G VE A++++  M
Sbjct: 511 TYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM 570

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            K NC+PN++ Y+TL++GL      D AL++ N +     +PD I Y+  LKGLC   R 
Sbjct: 571 PKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRAERW 627

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA E + + + +  LP  +T+ IL+  + + G
Sbjct: 628 EDAGELILEMIRKNCLPDEVTFSILINNLCHKG 660



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 260/544 (47%), Gaps = 69/544 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER---GV 166
           LC   + + A+R L +  E+    D  +  T++ G  ++G   G LA  + M        
Sbjct: 112 LCAAGRLDDAERVLGA-SERAGTADAVTRNTLVAGYCRAG---GRLADAERMLASLALSG 167

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +VV YN L+ G+ ++G    A+    RLV +    PN  T + ++ GLC    +D+  
Sbjct: 168 SADVVTYNTLVAGYCREGRLNDAR----RLVADMPFAPNSYTNSTLLKGLCSNKEWDDAE 223

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E+   M ++    +  T+   IH LC+ G  + A  V  +M +       + YN +I   
Sbjct: 224 ELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCL 283

Query: 287 CRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
              G+++E   L++ M  K   ++ SYN +++GL  +G+ ++A ++   +  K+C  D  
Sbjct: 284 AELGRVEEALHLFDQMPCKP--DIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEV 341

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T   +I+ LC  G ++ A+++                  V +M K+GCK + +T ++L+N
Sbjct: 342 TFNTVISYLCHRGLVDCAMEV------------------VEQMPKYGCKPDNFTYSALVN 383

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
              +   +++A+ L + +  K   P  V Y +++ GLC+ +R+ +    V EM+      
Sbjct: 384 ALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNL 440

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D +T+ L+I+ LCQ   +D   ++  +  + G +PD+ +YN LI+G    G V+DAL+L+
Sbjct: 441 DEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF 500

Query: 527 SNMK-KRN-------------------------------CVPNLVTYNTLMDGLFKTGDC 554
            NM  KRN                               C+PN VT++TL+  L + G  
Sbjct: 501 KNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFV 560

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           + A+E++  + +    P++I Y+  + GL     + DA + LND  C+   P TI +   
Sbjct: 561 ECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCK---PDTICYSAA 617

Query: 615 VRAV 618
           ++ +
Sbjct: 618 LKGL 621



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 204/429 (47%), Gaps = 33/429 (7%)

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE--KDSFTYCSFIHGLCKAG 255
           M     P  V   ++I  LC  GR D+   +   +  +ER    D+ T  + + G C+AG
Sbjct: 94  MRDPERPAAVPCTLLIKKLCAAGRLDDAERV---LGASERAGTADAVTRNTLVAGYCRAG 150

Query: 256 N-VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
             +  AER+   +  SG   D VTYN ++ G+CR G++ +   L  V       N  + +
Sbjct: 151 GRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRL--VADMPFAPNSYTNS 207

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            L++GL  N + D+A  +   +    C  +  T G++I+ LC+NG  ++A+ +L++    
Sbjct: 208 TLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQ---- 263

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                         M K  C       N +++   +  ++E A+ LF +M    C P + 
Sbjct: 264 --------------MSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIF 306

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SYNT++ GLC+  R+ +A + +  M+ K   PD +T++ +I+ LC    +D A+++  Q 
Sbjct: 307 SYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQM 366

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G  PD   Y+ L++ L   G V+DAL+L   +  +   PN V Y +++ GL +    
Sbjct: 367 PKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRW 423

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           D   ++   ++  +L  D +++ + +  LC    +    E L +    G  P  I ++ L
Sbjct: 424 DDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSL 483

Query: 615 VRAVMNNGA 623
           +     NG+
Sbjct: 484 INGFSENGS 492



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA- 516
           E +    +P  +  +LLI  LC + ++D A ++     + G T D    N L+ G C A 
Sbjct: 92  ESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAG 150

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G++ DA ++ +++       ++VTYNTL+ G  + G  + A  +   + +    P+  + 
Sbjct: 151 GRLADAERMLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRL---VADMPFAPNSYTN 206

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  LKGLCS     DA E L++ +  G  P  +T+ +++ ++  NG
Sbjct: 207 STLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNG 252


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 260/536 (48%), Gaps = 56/536 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           ++ A  + ++PD+AL VF R+ E+                              P + + 
Sbjct: 112 LVIALSQMALPDEALSVFGRLREL------------------------------PALPAC 141

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +++GLVK+  L     +FDEM  RG+  +VV YN LI+    +GD  +A E+W+++V 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              + PNVVTY  MI  LC+     +   ++  MK+     + +TY + +    K  N++
Sbjct: 202 R-RIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIK 260

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILI 317
            A   Y ++++ G+  + V +  +IDG C+A +I E   ++  M R      V  YN LI
Sbjct: 261 HALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLI 320

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G   +G   EA++ ++ +  K    D  T  +++ GLC  G +  A + L EV      
Sbjct: 321 HGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFL-EV------ 373

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      M + G  LNA   N L++ + ++  L+ A+     MS  G  P VV+Y+
Sbjct: 374 -----------MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYS 422

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           +LI+G  K      A +   EM+ KG +P+++TY+ LI+G  ++  +D A  L  +  +K
Sbjct: 423 SLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEK 482

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL---YSNMKKRNCVP---NLVTYNTLMDGLFKT 551
           G   +    ++L+ GLC   +V+DA++    YS  KK    P   N VTY TL+ GL+  
Sbjct: 483 GIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYID 542

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           G  ++A   ++ + +  + PD  +Y + ++GLC    + +A     D +  G+ PT
Sbjct: 543 GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 197/407 (48%), Gaps = 24/407 (5%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC-SFIHGLCKAGNVEGAERVYREMVE 269
           V++  L +    DE L ++ R+    RE  +   C + + GL KA  +     ++ EM+ 
Sbjct: 111 VLVIALSQMALPDEALSVFGRL----RELPALPACNAILDGLVKAHMLARVWELFDEMLG 166

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDE 328
            G+    VTYN +I+     G + + +E+W+ M  R+   NVV+Y  +I  L E   + +
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGD 226

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  ++  ++E     +  T+  L++   K   +  A+    +                  
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYD------------------ 268

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           + K G   N     +L++G  QA+++  A  +F +M R   +PTV  YN+LI+G  +   
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA +F +E++ KG +PD  T S+++ GLC   ++ +A +      Q G   +   YN+
Sbjct: 329 AQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI   C +G +++AL   + M +    PN+VTY++L+DG  K G+ + A+ I+  ++ + 
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + P++++Y   + G      M  AF    +   +GI    IT  +LV
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 56/302 (18%)

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           GVL+  L +    ++A+ +         GRL +  +L               CN++++G 
Sbjct: 110 GVLVIALSQMALPDEALSVF--------GRLRELPALP-------------ACNAILDGL 148

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN--------------------------- 441
           ++A  L     LF EM  +G  P+VV+YNTLIN                           
Sbjct: 149 VKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNV 208

Query: 442 --------GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
                    LC+ +  G+A     EM E G +P++ TY+ L++   +   I  AL     
Sbjct: 209 VTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYD 268

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L+ G  P+  ++  LI GLC A ++ +A  ++ +M +    P +  YN+L+ G F++G 
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +AL  +  I+ + LRPD  + +I ++GLC   +M  A  FL      GI      +++
Sbjct: 329 AQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 614 LV 615
           L+
Sbjct: 389 LI 390



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 37/306 (12%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           S+I    ++    +AL  FQ +       + F C   +  LC   Q + A RFL  + + 
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+  +  +Y  +I+   KSG+L  AL     M E GVE NVV Y+ LIDG  K G+   A
Sbjct: 378 GIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIA 437

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             I+  +V +  V PNVVTY  +I+G  K G  D    +   M++     ++ T    + 
Sbjct: 438 MAIYTEMVAK-GVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD 496

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
           GLC+   V+                DAV +     G  ++ K                 N
Sbjct: 497 GLCRENRVQ----------------DAVRFIMEYSGQKKSEK------------NPSIAN 528

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  LI GL  +G+ +EA   +  +R+     D  T+ ++I GLC  GY+  A+ +  
Sbjct: 529 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 588

Query: 370 EVEEGG 375
           ++ + G
Sbjct: 589 DMVKVG 594



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 90/192 (46%)

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P + + N +++GL K       +    EML +G  P ++TY+ LIN       +  A ++
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             Q + +   P+V  Y  +I  LC    + DA  L+  MK+    PNL TYN LM   FK
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
             +   AL  +  +L+  L P+ + +   + GLC  +R+++A     D     + PT   
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 611 WHILVRAVMNNG 622
           ++ L+     +G
Sbjct: 316 YNSLIHGAFRSG 327



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           +L+  L      ++AL ++  +++   +P L   N ++DGL K     +  E+++ +L  
Sbjct: 111 VLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            + P +++YN  +        ++ A+E  +  + R I P  +T+  ++ A+
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICAL 218


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 204/392 (52%), Gaps = 19/392 (4%)

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           +E+ DR  + E   D  TY   I   C    V  A ++  EM   G   D VTYN +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G++ E  +    M   G   NV+++NI++R +   G+  +A  +   +  K C+  
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T  +LIN LC+ G L +AI IL                   +M  HGC  N+ + N L
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDIL------------------EKMPTHGCTPNSLSYNPL 162

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++GF +  K++ AI   + M  +GC P +V+YNT++  LCK  +   A   + ++  KG 
Sbjct: 163 LHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P +ITY+ +I+GL +  K D A++L  +   KG  PDV  Y+ LI GL   GKVE+A++
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIK 282

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
            + +++     PN  TYN++M GL K    D+A++   +++ +  +P  +SY I ++G+ 
Sbjct: 283 FFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIA 342

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           +     +A E LN+   RG++  +    ++VR
Sbjct: 343 NEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 193/375 (51%), Gaps = 20/375 (5%)

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+ +R  +E   YP+V+TY ++I   C      + +++ D M     + D  TY   ++G
Sbjct: 2   EVLDRQ-LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           +CK G ++ A +    M   G   + +T+N ++   C  G+  +  +L   M RKGC  +
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           VV++NILI  L   G +  AI I E +    C  +S ++  L++G CK   +++AIQ L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL- 179

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                              M   GC  +  T N+++    +  K++ A+ L  ++S KGC
Sbjct: 180 -----------------EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           SP +++YNT+I+GL KV +  +A   + EM  KG KPD+ITYS LI GL +  K++ A+K
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIK 282

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                   G  P+   YN ++ GLC A + + A+   + M  + C P  V+Y  L++G+ 
Sbjct: 283 FFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIA 342

Query: 550 KTGDCDKALEIWNHI 564
             G   +ALE+ N +
Sbjct: 343 NEGLAKEALELLNEL 357



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 180/331 (54%), Gaps = 17/331 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V++Y ILI        V +A+ + + +  + C  D  T+ VL+NG+CK G L++AI+ L
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 369 NEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           N +   G                  GR  DA  L+  M + GC  +  T N L+N   + 
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L  AI + ++M   GC+P  +SYN L++G CK ++   A  +++ M+ +G  PD++TY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + ++  LC+  K+D A++L  Q   KG +P +  YN +I GL   GK + A++L   M+ 
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +   P+++TY++L+ GL + G  ++A++ ++ +    ++P+  +YN  + GLC   +   
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A +FL   + +G  PT +++ IL+  + N G
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEG 345



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 20/354 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C +    +A + L+ +  +G KPDV +Y  ++NG+ K G L  A+   + M   G + NV
Sbjct: 27  CAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNV 86

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + +NI++      G +M A+++   +V +    P+VVT+N++IN LC+ G     +++ +
Sbjct: 87  ITHNIILRSMCSTGRWMDAEKLLTEMVRK-GCSPSVVTFNILINFLCRKGLLGRAIDILE 145

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  +    +S +Y   +HG CK   ++ A +    MV  G + D VTYN M+   C+ G
Sbjct: 146 KMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDG 205

Query: 291 KIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+    EL   +  KGC  V ++YN +I GL + GK D+A+ +   +R K    D  T+ 
Sbjct: 206 KVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYS 265

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI GL + G + +AI+  ++VE                    G K NA+T NS+M G  
Sbjct: 266 SLIAGLSREGKVEEAIKFFHDVE------------------GFGVKPNAFTYNSIMFGLC 307

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +A + + AI     M  KGC PT VSY  LI G+       EA   + E+  +G
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 126/240 (52%)

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           +++R  +  C  +  T   L+      S +  A+ L  EM  +GC P VV+YN L+NG+C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K  R  EA  F+  M   G +P++IT+++++  +C + +   A KL  + ++KG +P V 
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            +NILI+ LC  G +  A+ +   M    C PN ++YN L+ G  K    D+A++    +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           +     PDI++YN  L  LC   ++  A E LN    +G  P  IT++ ++  +   G +
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 143/281 (50%), Gaps = 2/281 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C   ++  A++ L  +  KG  P V ++  +IN L + G L  A+ + ++M   G   N
Sbjct: 96  MCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPN 155

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + YN L+ GF K+    RA +  E +V     YP++VTYN M+  LCK G+ D  +E+ 
Sbjct: 156 SLSYNPLLHGFCKEKKMDRAIQYLEIMV-SRGCYPDIVTYNTMLTALCKDGKVDAAVELL 214

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +++          TY + I GL K G  + A  +  EM   G+  D +TY+++I G  R 
Sbjct: 215 NQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSRE 274

Query: 290 GKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK++E  + + +V G     N  +YN ++ GL +  + D AI     +  K C     ++
Sbjct: 275 GKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSY 334

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
            +LI G+   G   +A+++LNE+   G  + + A  +V R+
Sbjct: 335 TILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVRL 375


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 256/512 (50%), Gaps = 20/512 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CRK      +  L+ + +   +PDVYSY  VIN     G    AL + + M E G + +
Sbjct: 298 FCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPS 357

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  +  +ID F K+G+   A++ ++  + +  +  N + YN+MI+G  K     +   ++
Sbjct: 358 IATFCTIIDAFCKEGNVELARKYFDE-IEDMGLSQNTIVYNIMISGYVKARDISQANLLF 416

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+  +   D  T+ + + G  + G  E   R+ R++  SG+  D+   +  + G C A
Sbjct: 417 EEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWA 476

Query: 290 GKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  E  +L E ++G+    +VV++N +I      G  + A   + ++ +      S+T 
Sbjct: 477 GRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTC 536

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+  L + G L++A                   +L + +DK G  +       L++G+
Sbjct: 537 SSLLISLVRKGSLDEA-----------------WIALYDMIDK-GFPVTNMAFTVLLDGY 578

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A  L+ EM  +G  P  V++   INGLC      +AY    +ML KG+ P+ 
Sbjct: 579 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 638

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C+  K++ ALKL  +  ++G  PD+   N++I GLC  G+++ A++ + +
Sbjct: 639 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMD 698

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    P++VTYNTL+DG  K  D   A ++   + +    PD+ +YNI + G C+  +
Sbjct: 699 MCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRK 758

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ A   L + +  GI+P T+T++ ++ AV N
Sbjct: 759 INRAVMILEELISVGIVPNTVTYNTMINAVCN 790



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 275/607 (45%), Gaps = 74/607 (12%)

Query: 27  SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQ----A 82
           S  RE G   +P     + R LI       V ++   + ++K  CP +   +++      
Sbjct: 242 SKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV-VRKGPCPNNFTFNLLILEFCR 300

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKP 133
            G   + +  L V  +    F CE  +          C K Q   A   LN + E G KP
Sbjct: 301 KGWTRIGEALLHVMGK----FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP 356

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
            + ++ T+I+   K G++  A   FDE+ + G+  N + YNI+I G+ K  D  +A  ++
Sbjct: 357 SIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLF 416

Query: 194 ERLVMETSVYPNVVTYN-----------------------------------VMINGLCK 218
           E +  +  + P+ +T+N                                   V + GLC 
Sbjct: 417 EEMRTK-DIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 475

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            GR+DE +++ + +           + S I     AG  E A   Y  MV+ G+   + T
Sbjct: 476 AGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 535

Query: 279 YNAMIDGFCRAGKIKECF-ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
            ++++    R G + E +  L++++ +   +  +++ +L+ G    G V+ A S+W  ++
Sbjct: 536 CSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK 595

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
            +    D+      INGLC +G +  A  + +++   G                  G+L 
Sbjct: 596 GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLN 655

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  LV  M+K G   + +T N ++ G  +  +++ AI  F +M R G SP +V+YNTLI
Sbjct: 656 EALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK    G A   + +M + GW+PD+ TY++ I+G C  +KI+ A+ +  + +  G  
Sbjct: 716 DGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 775

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   YN +I+ +C+   ++ A+ L + + K   VPN VT N L+    K G  +KA+  
Sbjct: 776 PNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI-F 833

Query: 561 WNHILEE 567
           W   L E
Sbjct: 834 WGQKLSE 840



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 221/507 (43%), Gaps = 34/507 (6%)

Query: 118 KAKRFLNSLWE--KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           ++K     +WE  +  + D     T++   VKS     AL +  +M E GV  N    +I
Sbjct: 199 RSKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISI 258

Query: 176 LIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCG--RFDECLEMWDR 231
           L     + GD      +W+    V+     PN  T+N++I   C+ G  R  E L     
Sbjct: 259 LFRLLIRAGD---CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEAL--LHV 313

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M K   E D ++Y   I+  C  G    A  +   M+E+G      T+  +ID FC+ G 
Sbjct: 314 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 373

Query: 292 I---KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           +   ++ F+  E MG     N + YNI+I G ++   + +A  ++E +R K+   D  T 
Sbjct: 374 VELARKYFDEIEDMGLSQ--NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITF 431

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G  + G            EE G   L D       +   G   ++  C+  + G 
Sbjct: 432 NTLVAGHYRYGK-----------EEDGNRLLRD-------LSVSGLLHDSSLCDVTVAGL 473

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A + + A+ L + +  KG  P+VV++N++I           A+     M++ G  P  
Sbjct: 474 CWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSS 533

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            T S L+  L +   +D A       + KGF      + +L+ G    G V  A  L++ 
Sbjct: 534 STCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNE 593

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           MK R   P+ V +   ++GL  +G    A ++++ +L +   P+   YN  + G C   +
Sbjct: 594 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 653

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           +++A + + +   RG+LP   T ++++
Sbjct: 654 LNEALKLVREMNKRGLLPDIFTVNMII 680



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 133/302 (44%), Gaps = 49/302 (16%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+   N +  +G+ PD  ++   INGL  SG +  A  VF +M  +G   N   YN LI 
Sbjct: 587 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIG 646

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           GF K G    A ++  R + +  + P++ T N++I GLCK GR    +E +  M +    
Sbjct: 647 GFCKVGKLNEALKL-VREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 705

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  TY + I G CKA +V GA+ +  +M +SG   D  TYN  I G+C   KI     +
Sbjct: 706 PDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMI 765

Query: 299 WEVMGRKGCL-----------------------------------NVVSYNILIRGLLEN 323
            E +   G +                                   N V+ N+L+    + 
Sbjct: 766 LEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQ 825

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           G  ++AI   + L E + + D TTH +          +N+A + L   EEGGE +  + +
Sbjct: 826 GMPEKAIFWGQKLSEIHLDFDETTHKL----------MNRAYRAL---EEGGEKKRKEGS 872

Query: 384 SL 385
           + 
Sbjct: 873 AF 874



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 18/309 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           + L+R  +++    EA+ I   +RE     + +   +L   L + G      ++  +V  
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G                  C  N +T N L+  F +         L   M +  C P V
Sbjct: 282 KGP-----------------CP-NNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDV 323

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            SYN +IN  C   +   A   +  M+E G KP + T+  +I+  C+   +++A K   +
Sbjct: 324 YSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDE 383

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
               G + +  +YNI+I G   A  +  A  L+  M+ ++ VP+ +T+NTL+ G ++ G 
Sbjct: 384 IEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGK 443

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +    +   +    L  D    ++T+ GLC   R  +A + L + L +GI P+ + ++ 
Sbjct: 444 EEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNS 503

Query: 614 LVRAVMNNG 622
           ++ A  N G
Sbjct: 504 IIAAYGNAG 512


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 231/460 (50%), Gaps = 21/460 (4%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
            ++F     I       EKA + L +  ++G +P  Y+Y ++I   +K GD+   L ++ 
Sbjct: 30  TQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYK 89

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           +M +     +   +NILID   K      A  ++  +  + +V P+V TY ++I  L   
Sbjct: 90  QMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM-FKLNVSPDVYTYTILIRSLGTI 148

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
           GR D  +++++ M     + + FTY S +H    AG V+ A  ++++MV+ G+  DAVTY
Sbjct: 149 GRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTY 208

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           N +ID F + G+++  F+   V   +   N V+YN L+  L   G +   + ++  ++ K
Sbjct: 209 NILIDAFGKTGQLERAFDF--VGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
              ++  T+ +LI  L                  G  GR+ D   L   M  +  K +  
Sbjct: 267 GLVSNELTYAILIERL------------------GWAGRVEDVWQLYLEMVDNDIKYDIV 308

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T N++++   +A ++E A  LF++M  KG +   V+YN LINGL +  +   A + + EM
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            E G  P++ITY+ LI+   +   +  A +L  +  ++G  P+V  Y+ LI G   AG+ 
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           + A+ L+  MK   C PN VTYN L+D L + G    A+E
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 201/428 (46%), Gaps = 15/428 (3%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P   TY+ MI    K G     L M+ +M K +   D  T+   I  L KA  VE A  V
Sbjct: 63  PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           + +M +  +  D  TY  +I      G+I    +L+E M  +GC  N+ +Y+ ++     
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-------NEVEE-- 373
            G+VDEA  I++ + +K    D+ T+ +LI+   K G L +A   +       NEV    
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS 242

Query: 374 -----GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                G +G +     L  +M   G   N  T   L+     A ++E+   L+ EM    
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND 302

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
               +V+ N +++ L K  R   A+   ++M  KG   D +TY++LINGL ++ K+D A 
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L  +  + G  P++  YN LI        +  A +L+  MK+R   PN+V+Y++L++G 
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K G  D A+ ++  +  E   P+ ++YN+ +  L    R   A E+L +    G     
Sbjct: 423 GKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGK 482

Query: 609 ITWHILVR 616
           +T  +LVR
Sbjct: 483 VTKSLLVR 490



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 198/407 (48%), Gaps = 22/407 (5%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           M+  L    R+D+   + + M+K+  + D+  + + IH   +A  +E A +      + G
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAI 330
               A TY++MI  F + G ++    +++ M + K   +  ++NILI  L +  +V+EA 
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
           +++  + + N + D  T+ +LI  L                  G  GR+     L   M 
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSL------------------GTIGRIDAVMKLFESMT 162

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             GC+ N +T +S+M+ F  A +++ A  +F++M +KG  P  V+YN LI+   K  +  
Sbjct: 163 AQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE 222

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A+ FV +   + +  + +TY+ L++ L +   I   ++L  Q   KG   +   Y ILI
Sbjct: 223 RAFDFVGK--SRSFTNE-VTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILI 279

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
             L  AG+VED  QLY  M   +   ++VT N ++D L K G  + A E++  +  + L 
Sbjct: 280 ERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLN 339

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            D ++YNI + GL    ++  A   L +    G  P  IT++ L+ +
Sbjct: 340 ADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISS 386



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 188/425 (44%), Gaps = 54/425 (12%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALD 94
           SP ++ +  ++R L     +  V ++ E +  Q C        SV+ A+G     D+A D
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191

Query: 95  VFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           +FQ+M                            +KGL+PD  +Y  +I+   K+G L  A
Sbjct: 192 IFQQM---------------------------VQKGLQPDAVTYNILIDAFGKTGQLERA 224

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
              FD + +    TN V YN L+    +KGD     E++ ++  +  V  N +TY ++I 
Sbjct: 225 ---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLV-SNELTYAILIE 280

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            L   GR ++  +++  M  N+ + D  T  + +  L KAG VE A  ++++M   G+  
Sbjct: 281 RLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNA 340

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
           D VTYN +I+G  RAGK+     L   M   GC  N+++YN LI    +   +  A  ++
Sbjct: 341 DTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLF 400

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             ++E+    +  ++  LI G  K G  + AI +  E                  M   G
Sbjct: 401 LEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFRE------------------MKAEG 442

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  N  T N L++  I+A +   A+   +EM   GC    V+ + L+      +   EA 
Sbjct: 443 CPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVR--IPPQYMEEAQ 500

Query: 454 SFVKE 458
           SF +E
Sbjct: 501 SFFQE 505



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 101/212 (47%)

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           A + ++   L + M +         +NTLI+   +     +A   +    ++G +P   T
Sbjct: 8   ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           YS +I    +   +   L +  Q L+  F PD T +NILI  L  A +VE+A  ++ +M 
Sbjct: 68  YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           K N  P++ TY  L+  L   G  D  ++++  +  +  +P++ +Y+  +    S  R+ 
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVD 187

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +A +     + +G+ P  +T++IL+ A    G
Sbjct: 188 EACDIFQQMVQKGLQPDAVTYNILIDAFGKTG 219


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/622 (26%), Positives = 283/622 (45%), Gaps = 50/622 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +  +++  +L+ + +   AL  F  A R+  Y H P +++ +L  L   KL     R+L 
Sbjct: 99  LKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLR 158

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRF 122
           L+  ++                            +R  E FG       R  +   A R 
Sbjct: 159 LMAKRR---------------------------IERRPEAFGYVMVSYSRAGKLRNAMRX 191

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  + + G++PD+    T I+ LV    L  A+   + M    +  NV+ YN LI G+  
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCD 251

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE-KDS 241
                 A E+   +  +    P+ ++Y  ++  LCK  R  E   + ++M K+     D 
Sbjct: 252 LHRLEDAXELIAEMPFK-GCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY +F+H L K G+ + A    RE  E    VD V Y+A++  FCR G++ +  E+   
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M  KGC+ +VV+Y  +I GL +  KVD+A  +   + +  C  ++ ++  L+NGLCKNG 
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
             +A +++N  EE                       NA T + LM+GF +  K   A  L
Sbjct: 431 SLEAREMMNMSEE------------------XWWIPNAITYSVLMHGFRREGKSSEACDL 472

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
            +EM +KG  PT V  N LI  LC+ E+  EA  F+++ L  G   +++ ++ +I+G CQ
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
              ++ AL L          PDV  Y  +I  L   G++E+A +L   M +   +P  VT
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVT 592

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y T++    + G  +  L++   +L    +    +YN  ++ LCS   +  A++ L   L
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVL 650

Query: 601 CRGILPTTITWHILVRAVMNNG 622
                    T H+L+ + ++ G
Sbjct: 651 RTASKIDANTCHMLIESYLSKG 672



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 170/387 (43%), Gaps = 53/387 (13%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D   Y + +  L K    +GA+RV R M +  I      +  ++  + RAGK++      
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192

Query: 300 EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            +M + G                   ++  +SI        CN   T   VL+ G     
Sbjct: 193 TMMQKAG-------------------IEPDLSI--------CN---TAIHVLVMG----- 217

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             RL  A   + RM       N  T N L+ G+    +LE+A  
Sbjct: 218 -----------------NRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXE 260

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGL 478
           L  EM  KGCSP  +SY T++  LCK +R  E    +++ML +    PD +TY+  ++ L
Sbjct: 261 LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHML 320

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
            +    D AL+   +  ++ F  D   Y+ ++H  C  G+++ A ++ + M  + C+P++
Sbjct: 321 SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 380

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY ++++GL +    D+A ++   + +   +P+ +SY   L GLC      +A E +N 
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNM 440

Query: 599 ALCRGILPTTITWHILVRAVMNNGAST 625
           +     +P  IT+ +L+      G S+
Sbjct: 441 SEEXWWIPNAITYSVLMHGFRREGKSS 467


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 237/501 (47%), Gaps = 25/501 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL  + Y+Y  VI  L K GD    + VFDEM E GV+ +  CY   I+G  K       
Sbjct: 220 GLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLG 279

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +      + + +   Y  +I G C   + DE   ++  M+K     D + YC+ +H
Sbjct: 280 YAVLQDYRTRNA-HVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVH 338

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G C + N + A  VY+ M+  GI  + V ++ ++      G+  E  +++E     G  +
Sbjct: 339 GYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFI 398

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +  +YNIL   L + GKVD+A+ + + L+    + D   +  LING    G   +A  + 
Sbjct: 399 DRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLF 458

Query: 369 NEVEEGG-------EGRLA----------DAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            E+EE G          LA          +A  L+N M+  G + N+ T   ++ G   A
Sbjct: 459 KEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSA 518

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC------KVERFGEAYSFVKEMLEKGWK 465
            K+E A   F  +  +    +V  Y  L+NG C      K     EA+  ++ MLE   K
Sbjct: 519 GKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMK 578

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P  + YS +   LC +  ++ A  L   F+  GFTPD   Y I+I+G C    + +A +L
Sbjct: 579 PSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHEL 638

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           + +MK+R   P+ VTY  +++G  K     +A E++  + E  ++PD+I+Y + +KGL +
Sbjct: 639 FKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLN 698

Query: 586 CSRMSDAFEFLNDALCRGILP 606
                 AF+  N+ +  G+ P
Sbjct: 699 SGHTEIAFQLYNEMIDMGMTP 719



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 207/420 (49%), Gaps = 25/420 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C + + ++A+     + ++GL PDVY Y  +++G   S +   ALAV+  M  RG++TN
Sbjct: 305 FCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTN 364

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V ++ ++    + G  +   +++E    E+ ++ +   YN++ + LCK G+ D+ + M 
Sbjct: 365 CVIFSCILHCLDEMGRALEVVDMFEEF-KESGLFIDRKAYNILFDALCKLGKVDDAVGML 423

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D +K  + + D   Y + I+G    G    A+ +++EM E G   D V YN +  GF R 
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRN 483

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
               E  +L   M  +G   N  ++ I+I GL   GKV+EA   +  L+ ++       +
Sbjct: 484 RTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIY 543

Query: 349 GVLINGLC------KNGYLNKAIQILNEVEEGG-----------------EGRLADAASL 385
             L+NG C      K+  L +A  +L  + E                    G +  A +L
Sbjct: 544 TALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTL 603

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
            N     G   +A T   ++NG+ + + L  A  LFK+M  +G +P  V+Y  +ING CK
Sbjct: 604 FNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCK 663

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           +    EA+   K+M E+G KPD+I Y+++I GL  S   ++A +L  + +  G TP  T+
Sbjct: 664 MNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATL 723



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 17/331 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N++S+N LI  L+++ +VD A+ ++   +      +  T+ ++I  LCK G     +++ 
Sbjct: 189 NILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVF 248

Query: 369 NEVEEGG------------EG-----RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           +E++E G            EG     R     +++         ++ Y   +++ GF   
Sbjct: 249 DEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNE 308

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
           +KL+ A  +F EM ++G  P V  Y  L++G C    F +A +  K M+ +G K + + +
Sbjct: 309 TKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIF 368

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           S +++ L +  +    + +  +F + G   D   YNIL   LC  GKV+DA+ +   +K 
Sbjct: 369 SCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKS 428

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                ++  Y TL++G F  G   +A  ++  + E   +PD+++YN+   G        +
Sbjct: 429 MQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFE 488

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A + LN    +G+ P + T  I++  + + G
Sbjct: 489 AMDLLNYMESQGVEPNSTTHKIIIEGLCSAG 519



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 1/168 (0%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           CEA ++ +  + ++A   L ++ E  +KP    Y  +   L  +G++ GA  +F+     
Sbjct: 551 CEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHT 610

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           G   + V Y I+I+G+ K      A E+++ +  E  + P+ VTY +MING CK     E
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDM-KERGITPDAVTYTIMINGYCKMNCLRE 669

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
             E++  MK+   + D   Y   I GL  +G+ E A ++Y EM++ G+
Sbjct: 670 AHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGM 717



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 53/120 (44%)

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  +N LI+ L    +V+ AL L+   K    + N  TY  ++  L K GD +  + +
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ + E  +  D   Y   ++GLC  +R    +  L D   R        +  ++R   N
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 284/621 (45%), Gaps = 50/621 (8%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS 78
           HT   L D  TR    AH P L      +L+   L V +                 +A  
Sbjct: 116 HTYAILMDCCTR----AHRPELALAFFGQLLRTGLRVDII----------------IANH 155

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           +++ + +    D+ALD+        GC   +         LC + +  +A   L  + E 
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215

Query: 130 GL--KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
           G    PDV +Y TVI+   K GD+  A  +F EM +RG+  ++V Y+ ++    K    M
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK-ARAM 274

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
              E + R ++   V P+  TYN +I G    G++ E + ++  M+++    D  T    
Sbjct: 275 GKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNML 334

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
           +  LCK G ++ A  V+  M   G   D  +Y  M++G+   G + +  +L+++M   G 
Sbjct: 335 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGI 394

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ ++++LI+     G +D+A+ I+  +R+     D  T+  +I  LC+ G ++ A++
Sbjct: 395 APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAME 454

Query: 367 ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             N++ + G                  G L  A  L+  +  +G +L+    +S++N   
Sbjct: 455 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC 514

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++ +A  +F      G  P  V Y+ L++G C V +  +A      M+  G +P+++
Sbjct: 515 KLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 574

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  L+NG C+  +ID  L L  + LQKG  P   +YNI+I GL  AG+   A   +  M
Sbjct: 575 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM 634

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +     N  TYN ++ G FK    D+A+ ++  +    ++ DII+ N  + G+    R+
Sbjct: 635 TESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 694

Query: 590 SDAFEFLNDALCRGILPTTIT 610
            +A +        G++P  +T
Sbjct: 695 EEAKDLFASISRSGLVPCVVT 715



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 244/517 (47%), Gaps = 21/517 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF-DEMFERGVETNV 170
           R  + E A  F   L   GL+ D+     ++ G  ++     AL +      E G   +V
Sbjct: 127 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 186

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSV-YPNVVTYNVMINGLCKCGRFDECLEMW 229
             Y+IL+     +G   +A ++   +    +V  P+VV Y  +I+   K G  ++  +++
Sbjct: 187 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLF 246

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  TY S +H LCKA  +  AE   R+MV  G+  D  TYN +I G+   
Sbjct: 247 KEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 306

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ KE   +++ M R   L +VV+ N+L+  L + GK+ EA  +++ +  K  N D  ++
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++NG     Y  K             G L D   L + M   G   + YT + L+  +
Sbjct: 367 KIMLNG-----YATK-------------GCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                L+ A+ +F EM   G  P VV+Y T+I  LC++ +  +A     +M+++G  PD 
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y  LI G C    +  A +L  + +  G   D+  ++ +I+ LC  G++ DA  ++  
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
                  P+ V Y+ LMDG    G  +KAL +++ ++   + P+++ Y   + G C   R
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           + +      + L +GI P+TI ++I++  +   G + 
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTV 625



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 22/387 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LW 299
           S TY   +    +A   E A   + +++ +G+ VD +  N ++ GFC A +  E  + L 
Sbjct: 115 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILL 174

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLC 356
                 GC+ +V SY+IL++ L + GK  +A  +  ++ E    C+ D   +  +I+   
Sbjct: 175 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFF 234

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K G +NKA  +  E                  M + G   +  T +S+++   +A  +  
Sbjct: 235 KEGDVNKACDLFKE------------------MVQRGIPPDLVTYSSVVHALCKARAMGK 276

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    ++M  KG  P   +YN LI G     ++ EA    KEM      PD++T ++L+ 
Sbjct: 277 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG 336

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+  KI  A  +      KG  PDV  Y I+++G  + G + D   L+  M      P
Sbjct: 337 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++ T++ L+      G  DKA+ I+N + +  ++PD+++Y   +  LC   +M DA E  
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456

Query: 597 NDALCRGILPTTITWHILVRAVMNNGA 623
           N  + +G+ P    +H L++    +G+
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGS 483


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic; AltName: Full=Protein PROTON GRADIENT
            REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 280/553 (50%), Gaps = 79/553 (14%)

Query: 78   SVIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNS 125
            +++   GKN    +A+++F+ M            N +F C    LC+  +   A + L  
Sbjct: 578  TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC----LCKNDEVTLALKMLFK 633

Query: 126  LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
            + + G  PDV++Y T+I GLVK+G +  A+  F +M ++ V  + V    L+ G  K   
Sbjct: 634  MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASL 692

Query: 186  YMRAKEI----------------WERLV---METSVYPNVVTYN--VMINGLCKCGRFDE 224
               A +I                WE L+   +  +   N V+++  ++ NG+C+ G  D 
Sbjct: 693  IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG--DS 750

Query: 225  CL-----------------EMWDRMKKNEREKDSF-TYCSFIHGLCKAGNVEGAERVYRE 266
             L                  ++++  K+   +    TY   I GL +A  +E A+ V+ +
Sbjct: 751  ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810

Query: 267  MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
            +  +G   D  TYN ++D + ++GKI E FEL++ M    C  N +++NI+I GL++ G 
Sbjct: 811  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870

Query: 326  VDEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            VD+A+ ++ +L+ +++ +  + T+G LI+GL K+G                  RL +A  
Sbjct: 871  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG------------------RLYEAKQ 912

Query: 385  LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
            L   M  +GC+ N    N L+NGF +A + + A  LFK M ++G  P + +Y+ L++ LC
Sbjct: 913  LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972

Query: 445  KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF-LQKGFTPDV 503
             V R  E   + KE+ E G  PD++ Y+L+INGL +S +++ AL L  +    +G TPD+
Sbjct: 973  MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032

Query: 504  TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
              YN LI  L  AG VE+A ++Y+ +++    PN+ T+N L+ G   +G  + A  ++  
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092

Query: 564  ILEERLRPDIISY 576
            ++     P+  +Y
Sbjct: 1093 MVTGGFSPNTGTY 1105



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 155/626 (24%), Positives = 296/626 (47%), Gaps = 31/626 (4%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRL-IDPKLVVHVSRILE 62
           S++ +   LK+  +  ++ + F S        H+    +++L  L +D KL   ++ + +
Sbjct: 84  SSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLE-EMAYVFD 142

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKR 114
           L++ +      +  L++ ++        +A    ++M E         +     +L + R
Sbjct: 143 LMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSR 202

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
              +A      +  +G +P + +Y +++ GL K  D+   + +  EM   G++ NV  + 
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           I I    + G    A EI +R+  E    P+VVTY V+I+ LC   + D   E++++MK 
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + D  TY + +       +++  ++ + EM + G   D VT+  ++D  C+AG   E
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            F+  +VM  +G L N+ +YN LI GLL   ++D+A+ ++  +        + T+ V I+
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
              K+G    ++  L   E               +M   G   N   CN+ +    +A +
Sbjct: 442 YYGKSG---DSVSALETFE---------------KMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
              A  +F  +   G  P  V+YN ++    KV    EA   + EM+E G +PD+I  + 
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN L ++ ++D A K+  +  +    P V  YN L+ GL   GK+++A++L+  M ++ 
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
           C PN +T+NTL D L K  +   AL++   +++    PD+ +YN  + GL    ++ +A 
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663

Query: 594 EFLNDALCRGILPTTITWHILVRAVM 619
            F +  + + + P  +T   L+  V+
Sbjct: 664 CFFHQ-MKKLVYPDFVTLCTLLPGVV 688



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 292/603 (48%), Gaps = 74/603 (12%)

Query: 72   PEDVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKR 121
            P+ V  +++ + Y K    D+A+ +   M E  GCE  +         L +  + ++A +
Sbjct: 501  PDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWK 559

Query: 122  FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
                + E  LKP V +Y T++ GL K+G +  A+ +F+ M ++G   N + +N L D   
Sbjct: 560  MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619

Query: 182  KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
            K  +   A ++  ++ M+    P+V TYN +I GL K G+  E +  + +MKK     D 
Sbjct: 620  KNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDF 677

Query: 242  FTYCSFIHGLCKAGNVEGAERVYRE---------------------MVESGIFVDAVTYN 280
             T C+ + G+ KA  +E A ++                        + E+GI  +AV+++
Sbjct: 678  VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI-DNAVSFS 736

Query: 281  AMI--DGFCRAGK------IKECFELWEVMGRKGCL-----------NVVSYNILIRGLL 321
              +  +G CR G       I+   +   V G +               + +YN+LI GLL
Sbjct: 737  ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796

Query: 322  ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            E   ++ A  ++  ++   C  D  T+  L++   K+G +++  ++  E           
Sbjct: 797  EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE----------- 845

Query: 382  AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGCSPTVVSYNTLI 440
                   M  H C+ N  T N +++G ++A  +++A+ L+ + MS +  SPT  +Y  LI
Sbjct: 846  -------MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898

Query: 441  NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            +GL K  R  EA    + ML+ G +P+   Y++LING  ++ + D A  L  + +++G  
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 501  PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            PD+  Y++L+  LC  G+V++ L  +  +K+    P++V YN +++GL K+   ++AL +
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018

Query: 561  WNHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
            +N +   R + PD+ +YN  +  L     + +A +  N+    G+ P   T++ L+R   
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078

Query: 620  NNG 622
             +G
Sbjct: 1079 LSG 1081



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 163/665 (24%), Positives = 299/665 (44%), Gaps = 87/665 (13%)

Query: 25  FDSATREPGYAHSPHLFHHILRRLID----PKLVVHVSRILELIEIQKCYCPEDV----- 75
           F    R  G A   +  + IL+R+ D    P +V +   I  L   +K  C ++V     
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320

Query: 76  ----------ALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
                      ++++  +  N   D     +  M +         F      LC+   F 
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   L+ + ++G+ P++++Y T+I GL++   L  AL +F  M   GV+     Y + I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           D + K GD + A E +E++  +  + PN+V  N  +  L K GR  E  +++  +K    
Sbjct: 441 DYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             DS TY   +    K G ++ A ++  EM+E+G   D +  N++I+   +A ++ E ++
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559

Query: 298 LWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           ++  M   K    VV+YN L+ GL +NGK+ EAI ++E + +K C  ++ T   L + LC
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           KN  +  A+++L                   +M   GC  + +T N+++ G ++  +++ 
Sbjct: 620 KNDEVTLALKML------------------FKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK------------------- 457
           A+  F +M +K   P  V+  TL+ G+ K     +AY  +                    
Sbjct: 662 AMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720

Query: 458 -EMLEKGWKPDMITYS--LLINGLCQS---------------KKIDMALKLCCQFLQK-G 498
             +L +    + +++S  L+ NG+C+                  +  A  L  +F +  G
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P +  YN+LI GL  A  +E A  ++  +K   C+P++ TYN L+D   K+G  D+  
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC-RGILPTTITWHILVRA 617
           E++  +       + I++NI + GL     + DA +   D +  R   PT  T+  L+  
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900

Query: 618 VMNNG 622
           +  +G
Sbjct: 901 LSKSG 905



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 250/527 (47%), Gaps = 21/527 (3%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+     + + ++ +K D  +Y T+   L   G L  A     +M E G   N   YN
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI    K      A E++ R+++E    P++ TY+ ++ GL K    D  + +   M+ 
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + + +T+   I  L +AG +  A  + + M + G   D VTY  +ID  C A K+  
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311

Query: 295 CFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             E++E M  GR    + V+Y  L+    +N  +D     W  + +     D  T  +L+
Sbjct: 312 AKEVFEKMKTGRHKP-DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370

Query: 353 NGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCK 395
           + LCK G   +A   L+ + + G                   RL DA  L   M+  G K
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
             AYT    ++ + ++    +A+  F++M  KG +P +V+ N  +  L K  R  EA   
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
              + + G  PD +TY++++    +  +ID A+KL  + ++ G  PDV + N LI+ L  
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
           A +V++A +++  MK+    P +VTYNTL+ GL K G   +A+E++  ++++   P+ I+
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +N     LC    ++ A + L   +  G +P   T++ ++  ++ NG
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 271/589 (46%), Gaps = 72/589 (12%)

Query: 15  EKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEI--QKCYCP 72
           +++ +T L +F S + + G   +P+     LR++ +   V++      LI +  +  +C 
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPY----ALRKMREFGFVLNAYSYNGLIHLLLKSRFCT 205

Query: 73  EDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           E      ++ Y +       L+ F+   + +      L ++R  +     L  +   GLK
Sbjct: 206 E-----AMEVYRR-----MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG------------- 179
           P+VY++   I  L ++G +  A  +   M + G   +VV Y +LID              
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315

Query: 180 ----------------------FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
                                 F    D    K+ W  +  +  V P+VVT+ ++++ LC
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALC 374

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           K G F E  +  D M+      +  TY + I GL +   ++ A  ++  M   G+   A 
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELL 336
           TY   ID + ++G      E +E M  KG   N+V+ N  +  L + G+  EA  I+  L
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
           ++     DS T+ +++    K G +++AI++L+E+ E                  +GC+ 
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME------------------NGCEP 536

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +    NSL+N   +A +++ A  +F  M      PTVV+YNTL+ GL K  +  EA    
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           + M++KG  P+ IT++ L + LC++ ++ +ALK+  + +  G  PDV  YN +I GL   
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           G+V++A+  +  MKK    P+ VT  TL+ G+ K    + A +I  + L
Sbjct: 657 GQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 188/388 (48%), Gaps = 38/388 (9%)

Query: 126  LWEKGLKPDV-YSYGTVINGLVKSGDLL---------------GALAVFDEMF-ERGVET 168
            L E G+   V +S   V NG+ + GD +               GA  +F++   + GV+ 
Sbjct: 724  LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             +  YN+LI G  +      A++++ + V  T   P+V TYN +++   K G+ DE  E+
Sbjct: 784  KLPTYNLLIGGLLEADMIEIAQDVFLQ-VKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 229  WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD-AVTYNAMIDGFC 287
            +  M  +E E ++ T+   I GL KAGNV+ A  +Y +++    F   A TY  +IDG  
Sbjct: 843  YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            ++G++ E  +L+E M   GC  N   YNILI G  + G+ D A ++++ + ++    D  
Sbjct: 903  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            T+ VL++ LC  G +++ +    E++E G                   RL +A  L N M
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 390  D-KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
                G   + YT NSL+     A  +E A  ++ E+ R G  P V ++N LI G     +
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 449  FGEAYSFVKEMLEKGWKPDMITYSLLIN 476
               AY+  + M+  G+ P+  TY  L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 165/340 (48%), Gaps = 21/340 (6%)

Query: 306 GCLNVV----SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
           G LN+V    + N ++  L  +GK++E   +++L++++    D+ T+  +   L   G L
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169

Query: 362 NKAIQILNEVEEGG----------------EGRL-ADAASLVNRMDKHGCKLNAYTCNSL 404
            +A   L ++ E G                + R   +A  +  RM   G + +  T +SL
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           M G  +   +++ + L KEM   G  P V ++   I  L +  +  EAY  +K M ++G 
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD++TY++LI+ LC ++K+D A ++  +       PD   Y  L+        ++   Q
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
            +S M+K   VP++VT+  L+D L K G+  +A +  + + ++ + P++ +YN  + GL 
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              R+ DA E   +    G+ PT  T+ + +     +G S
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 241/497 (48%), Gaps = 26/497 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC  ++   A   L+ +   G   D  S   ++  L +  D+     +  EM +R + 
Sbjct: 254 GKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIR 313

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVME-----TSVYPNVVTYNVMINGLCKCGRF 222
            +VV + IL++   K      A ++++RL  +       V P+VV +N +I+GLCK G+ 
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373

Query: 223 DECLEMWDRMK-KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
           ++ L + + MK  N    ++ TY   I G  KAGN + A  ++R+M E G+  + +T N 
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           ++DG C+ G++    E +  M  KG   N  +Y  LI        ++ A+  +E +    
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
           C+ D+  +  LI+GLC                    GR+ DA+ +V+++   G  L+   
Sbjct: 494 CSPDAVVYYSLISGLCI------------------AGRMNDASVVVSKLKLAGFSLDRSC 535

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L++GF +  KLE    L  EM   G  P  ++YNTLI+ L K   F  A   +++M+
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI 595

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKV 519
           ++G +P ++TY  +I+  C  K +D  +K+  +        P+  +YNILI  LC    V
Sbjct: 596 KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDV 655

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           + A+ L  +MK +   PN  TYN ++ G+       KA E+ + ++EE  RPD I+  + 
Sbjct: 656 DRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715

Query: 580 LKGLCSCSRMSDAFEFL 596
            + L +   +     F+
Sbjct: 716 TEWLSAVGEIEKLKHFV 732



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 240/501 (47%), Gaps = 32/501 (6%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALA--VFDEMFERGVETNVVCYNILIDGFFKK 183
           L E+G+ PD +    ++  L   GD    +A  V   +   G   +    N L+    + 
Sbjct: 237 LGERGVFPDGFKLTQLVGKLC--GDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRG 294

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER------ 237
            D  R  E+   +  +  + P+VVT+ +++N LCK  R DE L+++DR++          
Sbjct: 295 RDIKRMNELLAEM-EKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGV 353

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI-FVDAVTYNAMIDGFCRAGKIKECF 296
           E D   + + I GLCK G  E    +  EM    I   + VTYN +IDGF +AG      
Sbjct: 354 EPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAH 413

Query: 297 ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
           EL+  M  +G   NV++ N L+ GL ++G+V  A+  +  ++ K    ++ T+  LI+  
Sbjct: 414 ELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAF 473

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C    +N+A+Q   E                  M   GC  +A    SL++G   A ++ 
Sbjct: 474 CGVNNINRAMQCFEE------------------MLSSGCSPDAVVYYSLISGLCIAGRMN 515

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           +A  +  ++   G S     YN LI+G CK ++    Y  + EM E G KPD ITY+ LI
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI 575

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           + L ++     A K+  + +++G  P V  Y  +IH  CS   V++ ++++  M   + V
Sbjct: 576 SYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKV 635

Query: 536 P-NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           P N V YN L+D L +  D D+A+ +   +  +R+RP+  +YN  LKG+     +  AFE
Sbjct: 636 PPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFE 695

Query: 595 FLNDALCRGILPTTITWHILV 615
            ++  +     P  IT  +L 
Sbjct: 696 LMDRMVEEACRPDYITMEVLT 716



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 230/489 (47%), Gaps = 32/489 (6%)

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM--ETSV 202
           L+KSG    AL V DEM +     +V    I+     + G      E+   +    E  V
Sbjct: 184 LLKSGRAGDALHVLDEMPQANSGFSVTG-EIVFGELVRSGRSFPDGEVVGLVAKLGERGV 242

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +P+      ++  LC   +     E+   + +     D+ +  + +  L +  +++    
Sbjct: 243 FPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNE 302

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-------VVSYNI 315
           +  EM +  I    VT+  +++  C+A +I E  ++++ +  KG  N       VV +N 
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADST-THGVLINGLCKNGYLNKAIQILNEVEEG 374
           LI GL + GK ++ +S+ E ++  N N  +T T+  LI+G  K G  ++A +        
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHE-------- 414

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                     L  +M++ G + N  T N+L++G  +  ++  A+  F EM  KG      
Sbjct: 415 ----------LFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAA 464

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  LI+  C V     A    +EML  G  PD + Y  LI+GLC + +++ A  +  + 
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL 524

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
              GF+ D + YN+LI G C   K+E   +L + M++    P+ +TYNTL+  L KTGD 
Sbjct: 525 KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG--ILPTTITWH 612
             A ++   +++E LRP +++Y   +   CS   + +  +   + +C    + P T+ ++
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGE-MCSTSKVPPNTVIYN 643

Query: 613 ILVRAVMNN 621
           IL+ A+  N
Sbjct: 644 ILIDALCRN 652



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 14/356 (3%)

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVD 327
           E G+F D      ++   C   K    +E+   VM   G ++  S N L+  L     + 
Sbjct: 239 ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIK 298

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
               +   + ++       T G+L+N LCK   +++A+Q+ + +   G            
Sbjct: 299 RMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWV------- 351

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS-PTVVSYNTLINGLCKV 446
                G + +    N+L++G  +  K E+ + L +EM     + P  V+YN LI+G  K 
Sbjct: 352 -----GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKA 406

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
             F  A+   ++M E+G +P++IT + L++GLC+  ++  A++   +   KG   +   Y
Sbjct: 407 GNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATY 466

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             LI   C    +  A+Q +  M    C P+ V Y +L+ GL   G  + A  + + +  
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKL 526

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                D   YN+ + G C   ++   +E L +    G+ P TIT++ L+  +   G
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 21/344 (6%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F++A      + E+G++P+V +  T+++GL K G +  A+  F+EM  +G++ N   Y  
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTA 468

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI  F    +  RA + +E + + +   P+ V Y  +I+GLC  GR ++   +  ++K  
Sbjct: 469 LISAFCGVNNINRAMQCFEEM-LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D   Y   I G CK   +E    +  EM E+G+  D +TYN +I    + G     
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLIN 353
            ++ E M ++G   +VV+Y  +I        VDE + I+ E+        ++  + +LI+
Sbjct: 588 SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            LC+N  +++AI ++ +++             V R+     + N  T N+++ G      
Sbjct: 648 ALCRNNDVDRAISLMEDMK-------------VKRV-----RPNTTTYNAILKGVRDKKM 689

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           L  A  L   M  + C P  ++   L   L  V    +   FV+
Sbjct: 690 LHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 276/620 (44%), Gaps = 63/620 (10%)

Query: 21  ALALFDSATREPGYA--HSPHLF---HHIL--RRLIDPKLVVHVSRILELIEIQKCYCPE 73
           AL       ++PG    H   LF    HIL   R+ DP    H+ + L L+         
Sbjct: 53  ALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDP--ARHILKELSLMS-------- 102

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRM----NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
                     GK+S    AL    R+      +F     +  R+   + +      +   
Sbjct: 103 ----------GKSSFVFGALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLY 152

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI-----DGFFKKG 184
           G  P VY+   ++  +VKS + +   +   EM +R +  +V  +NILI     +G FKK 
Sbjct: 153 GFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKS 212

Query: 185 DYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
            Y+  K       ME S Y P +VTYN +++  CK GRF   +E+ D M       D  T
Sbjct: 213 SYLMQK-------MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCT 265

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   IH LC++        + R+M +  I  + VTYN +++GF   GK+    +L   M 
Sbjct: 266 YNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEML 325

Query: 304 RKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
             G   N V++N LI G +  G   EA+ ++ ++  K       ++GVL++GLCKN   +
Sbjct: 326 TFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFD 385

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
            A                       RM ++G  +   T   +++G  +   L+ A+ +  
Sbjct: 386 LA------------------RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLN 427

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           EMS+ G  P +V+Y+ LING C+V R   A   V  +   G  P+ I YS LI   C+  
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            +   +++    + +G TPD   +N+L+  LC AGKV +A +    M     +PN V+++
Sbjct: 488 CLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFD 547

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L++G   +G+  KA  +++ + +    P   +Y   LKGLC    +  A +FL      
Sbjct: 548 CLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNV 607

Query: 603 GILPTTITWHILVRAVMNNG 622
                T+  + L+ A+  +G
Sbjct: 608 PAAVDTVMCNTLITAMCKSG 627



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 266/605 (43%), Gaps = 90/605 (14%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +F+ A+ F   +   G+     +Y  +I+GL K+G L  A+ + +EM + G++ +
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y+ LI+GF + G    AKEI  R +    + PN + Y+ +I   C+ G   E + ++
Sbjct: 438 IVTYSALINGFCRVGRLKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIY 496

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       D FT+   +  LCKAG V  AE   R M   GI  +AV+++ +I+G+  +
Sbjct: 497 EAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSS 556

Query: 290 GKIKECFELWEVMGRKG------------------------------------CLNVVSY 313
           G+  + F +++ M + G                                     ++ V  
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI  + ++G +D+A+S++  + +++   DS T+  LI+GLC+ G    AI    E E 
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 374 GGE------------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            G                   G+         +MDK G   +  T N++++G+ +  K+E
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
               L  EM  +   P + +YN L++G  K +    ++   + M+  G  PD +T   +I
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV---------------- 519
            G+C+S  +++ LK+   F+ +G   D   +N+LI   C+ G++                
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGIS 856

Query: 520 -------------------EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                              +++  +   M K+   P    Y  L++GL + GD   A  +
Sbjct: 857 LDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVV 916

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              ++  ++ P  ++ +  ++ L  C +  +A   L   L   ++PT  ++  L+     
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCK 976

Query: 621 NGAST 625
           NG  T
Sbjct: 977 NGNVT 981



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 244/560 (43%), Gaps = 56/560 (10%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+  +  +A+ F+  +   G+ P+  S+  +ING   SG+ L A +VFDEM + G    
Sbjct: 518  LCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPT 577

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
               Y  L+ G  K G  + A++  + L        + V  N +I  +CK G  D+ + ++
Sbjct: 578  FFTYGSLLKGLCKGGHLIAAEKFLKSL-QNVPAAVDTVMCNTLITAMCKSGNLDKAVSLF 636

Query: 230  DRMKKNEREKDSFTYCSFIHGLC------------------------------------K 253
              M +     DSFTY S I GLC                                    K
Sbjct: 637  GEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFK 696

Query: 254  AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVS 312
            AG  +      ++M + G+  D VT NAMIDG+ R GKI++  +L   MG +    N+ +
Sbjct: 697  AGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTT 756

Query: 313  YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN--- 369
            YNIL+ G  +   V  +  ++  +       D  T   +I G+C++  L   ++IL    
Sbjct: 757  YNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFI 816

Query: 370  ----EVEEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
                EV+              G +  A  +VN M   G  L+  TC+++++   +  + +
Sbjct: 817  CRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQ 876

Query: 416  NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
             +  +  EMS++G SP    Y  L+NGLC+V     A+   +EM+     P  +  S ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 476  NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
              L +  K D A  L    L+    P +  +  L+H  C  G V +AL+L   M      
Sbjct: 937  RALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLK 996

Query: 536  PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS-CSRMSDAFE 594
             +LV+YN L+ GL   GD   A E++  +  +    ++ +Y   + G+ S  +  S    
Sbjct: 997  LDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDI 1056

Query: 595  FLNDALCRGILPTTITWHIL 614
             L D L RG +      H++
Sbjct: 1057 ILKDLLARGFITAMSFNHMI 1076



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 10/153 (6%)

Query: 71   CPEDVALS-VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKR 121
            CP +VA S +++A  K    D+A  + + M ++        F     + C+     +A  
Sbjct: 926  CPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALE 985

Query: 122  FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
                +   GLK D+ SY  +I GL   GD+  A  +F+EM   G   NV  Y  L+ G  
Sbjct: 986  LRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGIL 1045

Query: 182  KKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
             +G      +I  + ++    +   +++N MIN
Sbjct: 1046 SQGTEFSGTDIILKDLLARG-FITAMSFNHMIN 1077


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 248/506 (49%), Gaps = 31/506 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE----IFGCE----AGILCRKRQFEKAKRFLNSLWEK 129
           S I  Y K  + DKA+ VF  M++    +F  +     G+L    +F+ A  + + +  +
Sbjct: 14  SRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTR 73

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G     ++Y   I GL K  +      +  +M       ++  +NI +   F +G    A
Sbjct: 74  GFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLA 133

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E++E++V +    P+VVTY ++I+G+CK  +FD  ++ W  M       D+    + + 
Sbjct: 134 LEVFEKIV-KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVV 192

Query: 250 GLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           GLC    V+ A  +  ++++SG + +  + YNA+I GFCRAG+I +   +   M R GC 
Sbjct: 193 GLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCE 252

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN+ +    +   +D+A  + +L+       D  ++  L+ G+CK    +KA  +
Sbjct: 253 PDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL 312

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +                  N+M   G C + +Y  N+++  F +     +A  LF+EM +
Sbjct: 313 MT-----------------NKMWPKGLCDVVSY--NTIIKAFCKIGDTTSAYKLFEEMGQ 353

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P VV++   I        F  A   + +M E G  PD I Y+ +I+ LC+S K++M
Sbjct: 354 KGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEM 413

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A  + C  +++G +PDV  +N LI+G C   +V +A+ LY  M+ R   P+ VTY  ++ 
Sbjct: 414 AHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIG 473

Query: 547 GLFKTGDCDKALEIWNHILEERLRPD 572
           GL +      A  +W  ++++    D
Sbjct: 474 GLIEEKKISIACMVWGQMMDKGFTLD 499



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 216/467 (46%), Gaps = 30/467 (6%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y   I G+ K G   +A ++++ +  +++     + YN  I  L    RFD     + +M
Sbjct: 12  YRSRIAGYVKAGLIDKAVQVFDEM-SQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                   SFTY  FI GLCK  N    + +  +M       D   +N  +      G+I
Sbjct: 71  GTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRI 130

Query: 293 KECFELWEVM---GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
               E++E +   GRK   +VV+Y I+I G+ +  K D AI  W  +  K  + D+   G
Sbjct: 131 DLALEVFEKIVKNGRKP--DVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMDK 391
            ++ GLC    ++ A +++ +V + G                   GR+  A ++ + M +
Sbjct: 189 AIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRR 248

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
           +GC+ +  T N  +N F     L++A  L K M R G  P V SYN L+ G+CK     +
Sbjct: 249 NGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDK 308

Query: 452 AYSFVKEMLEKGWKP---DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           AY     M  K W     D+++Y+ +I   C+      A KL  +  QKG  PDV  + I
Sbjct: 309 AYLL---MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTI 365

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
            I      G    A +L   M +    P+ + Y T++D L K+G  + A  I+  ++E+ 
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQG 425

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + PD+IS+N  + G C CSR+S+A     +   RG  P  +T+ +++
Sbjct: 426 ISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLII 472



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 200/439 (45%), Gaps = 54/439 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ + F      L+ +      PD++++   ++ L   G +  AL VF+++ + G + +
Sbjct: 89  LCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPD 148

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL--------------------------------- 196
           VV Y I+I G  K   +  A + W  +                                 
Sbjct: 149 VVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELII 208

Query: 197 -VMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            VM++  V  + + YN +I+G C+ GR D+   +   M++N  E D  TY  F++  C  
Sbjct: 209 DVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDE 268

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSY 313
             ++ A+++ + M  SGI  D  +YN ++ G C+     + + L    M  KG  +VVSY
Sbjct: 269 LMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSY 328

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I+   + G    A  ++E + +K    D  T  + I      G  N A ++L+++ E
Sbjct: 329 NTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTE 388

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G   L+        +  H CK               + K+E A  +F +M  +G SP V
Sbjct: 389 MG---LSPDCIFYTTIIDHLCK---------------SGKVEMAHSIFCDMVEQGISPDV 430

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           +S+N LING CK  R  EA    +EM  +G  PD +TY L+I GL + KKI +A  +  Q
Sbjct: 431 ISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQ 490

Query: 494 FLQKGFTPDVTMYNILIHG 512
            + KGFT D  +   LI G
Sbjct: 491 MMDKGFTLDRAIAQTLIRG 509



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 47/118 (39%)

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           +Y   I G   AG ++ A+Q++  M + NC    + YN  +  L      D A   ++ +
Sbjct: 11  IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                     +Y+  + GLC     +   E L+D      LP    ++I +  +   G
Sbjct: 71  GTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 243/497 (48%), Gaps = 33/497 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR+R F                   Y Y  V+   +   +L  A+ +F  M +     +
Sbjct: 32  FCRRRAFSGKTS--------------YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPS 77

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ ++ L+    K   +       E++ +   +  N+ TYN++IN  C+C R    L + 
Sbjct: 78  IIEFSKLLSAIAKMNKFDLVISFGEKMEI-LGISHNLYTYNILINCFCRCSRLSLALALL 136

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M K   E D  T  S ++G C    +  A  +  +MVE G   D VT+  +I G    
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K  E   L + M ++GC  ++V+Y  ++ GL + G  D A+++   +      A+   +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             +I+ LCK  + + A+ +  E+E  G                  GR +DA+ L++ M +
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N  T ++L++ F++  KL  A  L++EM ++   P + +Y++LING C ++R GE
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   ++ M+ K   P+++TY+ LING C++K++D  ++L  +  Q+G   +   Y  LIH
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G   A   ++A  ++  M      PN++TYN L+DGL K G   KA+ ++ ++    + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 572 DIISYNITLKGLCSCSR 588
           DI +YNI ++G+C   +
Sbjct: 497 DIYTYNIMIEGMCKAGK 513



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 233/448 (52%), Gaps = 24/448 (5%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           ++ ++  +P+++ ++ +++ + K  +FD  +   ++M+      + +TY   I+  C+  
Sbjct: 68  VMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCS 127

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
            +  A  +  +M++ G   D VT N++++GFC   +I +   L + M   G   + V++ 
Sbjct: 128 RLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFT 187

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI GL  + K  EA+++ + + ++ C  D  T+G ++NGLCK G  + A+ +LN++E  
Sbjct: 188 TLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247

Query: 375 G-EGRLA----------------DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
             E  +                 DA +L   M+  G + N  T +SL++      +  +A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L  +M  +  +P +V+++ LI+   K  +  +A    +EM+++   P++ TYS LING
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C   ++  A ++    ++K   P+V  YN LI+G C A +V+  ++L+  M +R  V N
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA---FE 594
            VTY TL+ G F+  DCD A  ++  ++   + P+I++YNI L GLC   +++ A   FE
Sbjct: 428 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 487

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNG 622
           +L  +      P   T++I++  +   G
Sbjct: 488 YLQRSTME---PDIYTYNIMIEGMCKAG 512



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 22/380 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   +   A   ++ + E G KPD  ++ T+I+GL        A+A+ D M +RG + +
Sbjct: 158 FCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD 217

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V Y  +++G  K+GD   A  +  +  ME + +  NVV Y+ +I+ LCK    D+ L +
Sbjct: 218 LVTYGAVVNGLCKRGDTDLALNLLNK--MEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M+      +  TY S I  LC  G    A R+  +M+E  I  + VT++A+ID F +
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            GK+ +  +L+E M ++    N+ +Y+ LI G     ++ EA  + EL+  K+C  +  T
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LING CK   ++K +++  E                  M + G   N  T  +L++G
Sbjct: 396 YNTLINGFCKAKRVDKGMELFRE------------------MSQRGLVGNTVTYTTLIHG 437

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F QA   +NA  +FK+M   G  P +++YN L++GLCK  +  +A    + +     +PD
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497

Query: 468 MITYSLLINGLCQSKKIDMA 487
           + TY+++I G+C++ K  M 
Sbjct: 498 IYTYNIMIEGMCKAGKWKMG 517



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 17/370 (4%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   LLN          A+AL D    E GY      F  ++  L    L    S  +
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMV-EMGYKPDTVTFTTLIHGLF---LHNKASEAV 203

Query: 62  ELIE--IQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
            LI+  +Q+   P+ V   +V+    K    D AL++  +M          I+      L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  + A      +  KG++P+V +Y ++I+ L   G    A  +  +M ER +  N+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V ++ LID F KKG  ++A++++E ++ + S+ PN+ TY+ +ING C   R  E  +M +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMI-KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M + +   +  TY + I+G CKA  V+    ++REM + G+  + VTY  +I GF +A 
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                  +++ M   G   N+++YNIL+ GL +NGK+ +A+ ++E L+      D  T+ 
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502

Query: 350 VLINGLCKNG 359
           ++I G+CK G
Sbjct: 503 IMIEGMCKAG 512



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 176/344 (51%), Gaps = 20/344 (5%)

Query: 291 KIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++ +   L+ VM + +   +++ ++ L+  + +  K D  IS  E +     + +  T+ 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 350 VLINGLC----------------KNGYLNKAIQILNEVEEG--GEGRLADAASLVNRMDK 391
           +LIN  C                K GY    I  LN +  G     R++DA +LV++M +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +  T  +L++G    +K   A+ L   M ++GC P +V+Y  ++NGLCK      
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A + + +M     + +++ YS +I+ LC+ +  D AL L  +   KG  P+V  Y+ LI 
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC+ G+  DA +L S+M +R   PNLVT++ L+D   K G   KA +++  +++  + P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +I +Y+  + G C   R+ +A + L   + +  LP  +T++ L+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/606 (25%), Positives = 283/606 (46%), Gaps = 33/606 (5%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDV 95
           SP  ++  LR L+   +  ++ ++   + +Q+   P+ V   ++I AY K      A   
Sbjct: 143 SPKCYNLALRSLLRFDMTEYMGKLYSHL-VQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 96  FQRMNE------IFGCEAGIL--CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           F  + E       + C A +L  CR     KA   L  +   G + + YSY  +I GL +
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYE 261

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           +  +  AL +   M + G   N+  Y +LI G  K+G    A+ + + + +   V P+V 
Sbjct: 262 ARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLR-GVVPSVW 320

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TYN MI+G CK GR  + L +   M++N    D +TY S I+GLC  G ++ AE +    
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKV 326
           +  G     +T+  +I+G+C+A +I +   +   M    C L++ +Y +LI  L++  ++
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
            EA      +       +   +  +I+G CK G +  A+++   +E  G           
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 + +L  A +L+ +M + G         +L+ G  +  + +NA  LF+ M + G 
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P   +YN L + LCK  R  EAYSF   ++ KG     +TY+ L++G  ++   D A  
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + + +G   D+  Y++L+  LC   K+ +AL +   M       N+V Y  ++  + 
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D A  ++N ++    +P   +Y + +   C   ++ +A   + +    G+ P  +
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVV 736

Query: 610 TWHILV 615
           T+HI +
Sbjct: 737 TYHIFI 742



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 256/540 (47%), Gaps = 39/540 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +   A+  L+ +  +G+ P V++Y  +I+G  KSG +  AL +   M + G   +
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN LI G    G    A+E+    +      P V+T+  +ING CK  R D+ L + 
Sbjct: 354 DWTYNSLIYGLCG-GKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAERIDDALRVK 411

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  +  + D   Y   I+ L K   ++ A+    EM  +G+  + V Y ++IDG+C+ 
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKV 471

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    E++++M  +GC  N  +Y  LI GL+++ K+ +A+++   ++E         +
Sbjct: 472 GMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAY 531

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G CK    + A ++   +E+ G                  GR  +A S + R   
Sbjct: 532 TTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR--- 588

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G  L   T  SL++GF +A   + A  L ++M  +GC   + +Y+ L+  LCK ++  E
Sbjct: 589 KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNE 648

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A S + +M   G K +++ Y+++I+ + +  K D A  L  + +  G  P  T Y + I 
Sbjct: 649 ALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFIS 708

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++E+A  L   M++    P++VTY+  ++G    G  D+A      +++    P
Sbjct: 709 SYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEP 768

Query: 572 DIISYNITLK----------------GLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  +Y + LK                G+ +   ++  ++ L   +  G+ PT +T+  ++
Sbjct: 769 NCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSII 828



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 249/546 (45%), Gaps = 38/546 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  + + A R  +++     K D+ +YG +IN L+K   L  A    +EMF  G+  NV
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  +IDG+ K G    A E++ +L+     +PN  TY  +I GL +  +  + + +  
Sbjct: 459 VIYTSIIDGYCKVGMVGAALEVF-KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+++        Y + I G CK    + A R++  M ++G+  D   YN + D  C++G
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + +E +     + RKG  L  V+Y  L+ G  + G  D A  + E +  + C AD  T+ 
Sbjct: 578 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKH 392
           VL+  LCK   LN+A+ IL+++   G                 EG+   A SL N M   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K +A T    ++ + +  ++E A  L  EM R G +P VV+Y+  ING   +     A
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754

Query: 453 YSFVKEMLEKGWKPDMITYSLLI----------------NGLCQSKKIDMALKLCCQFLQ 496
           +S +K M++   +P+  TY LL+                +G+    +++   +L  + ++
Sbjct: 755 FSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMK 814

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P V  Y+ +I G C A ++E+A  L  +M  +   PN   Y  L+          K
Sbjct: 815 HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGK 874

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            +     ++E   +P + SY+  + GLC       A     D L        + W IL  
Sbjct: 875 DVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILND 934

Query: 617 AVMNNG 622
            ++  G
Sbjct: 935 GLLKAG 940



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 249/591 (42%), Gaps = 82/591 (13%)

Query: 66  IQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQF 116
           I + + P  +  + +I  Y K    D AL V   M         + +G    +L +K + 
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           ++AK  LN ++  GL P+V  Y ++I+G  K G +  AL VF  M   G   N   Y  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I G  +     +A  +  ++  E  + P V+ Y  +I G CK   FD    +++ M+KN 
Sbjct: 500 IYGLIQDKKLHKAMALITKM-QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNG 558

Query: 237 REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECF 296
              D   Y      LCK+G    AE  Y  +V  G+ +  VTY +++DGF +AG      
Sbjct: 559 LTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAA 615

Query: 297 ELWEVMGRKGC------------------------------------LNVVSYNILIRGL 320
            L E M  +GC                                     N+V+Y I+I  +
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEM 675

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
           ++ GK D A S++  +        +TT+ V I+  CK G + +A  ++ E+E  G     
Sbjct: 676 IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDV 735

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS----------- 412
                        G +  A S + RM    C+ N +T   L+  F++ S           
Sbjct: 736 VTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSG 795

Query: 413 -----KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
                +L     L + M + G +PTVV+Y+++I G CK  R  EA   +  ML K   P+
Sbjct: 796 MWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPN 855

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
              Y++LI   C  K     +      ++ GF P +  Y+ LI GLC  G  + A  L+ 
Sbjct: 856 EEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFC 915

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           ++   +   N V +  L DGL K G  D   ++   +     R D  SY++
Sbjct: 916 DLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSM 966



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 239/502 (47%), Gaps = 23/502 (4%)

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL--------- 110
           + +L+E + C+       S+I    ++    KA+ +  +M E  G   G++         
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVIAYTTLIQGQ 538

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+K +F+ A R    + + GL PD  +Y  + + L KSG    A   +  +  +GV    
Sbjct: 539 CKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTK 595

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  L+DGF K G+   A  + E++V E     ++ TY+V++  LCK  + +E L + D
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADLYTYSVLLQALCKQKKLNEALSILD 654

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  +  + +   Y   I  + K G  + A+ ++ EM+ SG    A TY   I  +C+ G
Sbjct: 655 QMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I+E   L   M R G   +VV+Y+I I G    G +D A S  + + + +C  +  T+ 
Sbjct: 715 QIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYW 774

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEG---RLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           +L+    K   +N      + ++  G      L     L+ RM KHG      T +S++ 
Sbjct: 775 LLLKHFLKMSLINA-----HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           GF +A++LE A  L   M  K  SP    Y  LI   C ++ FG+  SFV +M+E G++P
Sbjct: 830 GFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQP 889

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
            + +Y  LI GLC     D A  L C  L   +  +   + IL  GL  AG V+   QL 
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 527 SNMKKRNCVPNLVTYNTLMDGL 548
           + M  R+C  +  +Y+ L D +
Sbjct: 950 AAMDNRHCRIDSESYSMLTDSI 971



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 211/432 (48%), Gaps = 19/432 (4%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN+ +  L +    +   +++  + +     D+ TY + I   CK G++  A R +  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVD 327
           ESG+ +D  T NA++ G+CR   +++   L  +M   GC  N  SY ILI+GL E   V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------ 375
           EA+ +  ++ +  C+ +   + +LI GLCK G ++ A  +L+E+   G            
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 376 -----EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 GR+ DA  +   M+++GC  + +T NSL+ G     KL+ A  L      +G +
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           PTV+++  LING CK ER  +A      M+    K D+  Y +LIN L +  ++  A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             +    G  P+V +Y  +I G C  G V  AL+++  M+   C PN  TY +L+ GL +
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
                KA+ +   + E+ + P +I+Y   ++G C      +AF         G+ P    
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565

Query: 611 WHILVRAVMNNG 622
           +++L  A+  +G
Sbjct: 566 YNVLTDALCKSG 577



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/624 (24%), Positives = 276/624 (44%), Gaps = 66/624 (10%)

Query: 3   ISAKRLLNLLKAEK---NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           ++A  + +L +A     +P TALA F+   R PG+ H+      +L+ L   +   +  +
Sbjct: 48  VTAAHVADLFRAPVSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDK 107

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKA 119
           ++               LS+I   G      +A+D  Q +  + G         ++   +
Sbjct: 108 LV---------------LSMISCSGTAEDVREAVDAIQAIRRVGG---------KRLVLS 143

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
            +  N      L+ D+  Y             +G L  +  + + G+  + V YN +I  
Sbjct: 144 PKCYNLALRSLLRFDMTEY-------------MGKL--YSHLVQEGLLPDTVTYNTMIMA 188

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + KKG    A   +  L+ E+ +  +  T N ++ G C+     +   +   M      +
Sbjct: 189 YCKKGSLAIAHRYF-CLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           + ++Y   I GL +A  V  A  +   MV+ G  ++   Y  +I G C+ G+I +   L 
Sbjct: 248 NEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLL 307

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M  +G + +V +YN +I G  ++G++ +A+ I  L+ +  CN D  T+  LI GLC  
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG- 366

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             G+L +A  L+N     G      T  +L+NG+ +A ++++A+
Sbjct: 367 ------------------GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            +   M    C   + +Y  LIN L K  R  EA   + EM   G  P+++ Y+ +I+G 
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+   +  AL++      +G  P+   Y  LI+GL    K+  A+ L + M++    P +
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + Y TL+ G  K  + D A  ++  + +  L PD  +YN+    LC   R  +A+ FL  
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-- 586

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            + +G++ T +T+  LV      G
Sbjct: 587 -VRKGVVLTKVTYTSLVDGFSKAG 609


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 20/457 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + +K  + +  +  KGLKP++Y+Y ++I  L KSG +  A  V  EM  +G+  + 
Sbjct: 21  CLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDT 80

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LIDGF K G+   A ++++ +  +  + P+ + Y  +I GLC+CG+  E  ++++
Sbjct: 81  VVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFN 139

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M     E D  TY + I G CK+G +E A  ++ +MV+SG+  + VTY A+ DG C+ G
Sbjct: 140 KMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLG 199

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++    EL   M  KG  LN+ +YN L+ GL ++G + +A+ + E +       D+ T  
Sbjct: 200 QVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFT 259

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L++  CK G + KA ++L E                  M   G +    T N LMNGF 
Sbjct: 260 TLMDAYCKTGEMVKAHELLRE------------------MLDRGLQPTVITFNVLMNGFC 301

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            +  LE+   L   M  KG  P   +YN+L+   C            K M  +G  PD  
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY++LI G C+++ +  A  L  +  +KGF    + YN +I G     K+ +A +L+  M
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
           ++     +   YN  +D  +  G+ + ALE+ +  +E
Sbjct: 422 RREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 224/430 (52%), Gaps = 18/430 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+VV+Y+ +ING C  G   + L++   M+    + + +TY S I  LCK+G V+ AERV
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
            REM+  GI  D V Y  +IDGFC+ G I+  ++L++ M ++  + + ++Y  +I GL  
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------ 376
            GK+ EA  ++  +  +    D  T+  LI+G CK+G + KA  + N++ + G       
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 377 -----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G++  A  L++ M   G +LN  T NSL+NG  ++  +  A+ L +EM 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P  +++ TL++  CK     +A+  ++EML++G +P +IT+++L+NG C S  ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
              +L    L+KG  P+ T YN L+   C    +    ++Y  M  R  +P+  TYN L+
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            G  K  +  +A  +   + E+       SYN  +KG     ++S+A E   +    G+ 
Sbjct: 368 KGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMA 427

Query: 606 PTTITWHILV 615
                +++ V
Sbjct: 428 ADAEIYNLFV 437



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 184/343 (53%), Gaps = 19/343 (5%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           D V+Y+ +I+G+C  G++++  +L + M  KG   N+ +YN +I  L ++GKVD+A  + 
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             +  +    D+  +  LI+G CK G +  A ++ +E+E+              R+    
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK-------------QRIVPDF 115

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
               A  C     G  +  K+  A  +F +M  +G  P  V+Y TLI+G CK     +A+
Sbjct: 116 IAYTAVIC-----GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAF 170

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           S   +M++ G  P+++TY+ L +GLC+  ++D A +L  +   KG   ++  YN L++GL
Sbjct: 171 SLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C +G +  A++L   M+     P+ +T+ TLMD   KTG+  KA E+   +L+  L+P +
Sbjct: 231 CKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTV 290

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           I++N+ + G C    + D    L   L +GI+P T T++ L++
Sbjct: 291 ITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 191/387 (49%), Gaps = 19/387 (4%)

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK      D  +Y + I+G C  G ++   ++ +EM   G+  +  TYN++I   C++GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + +   +   M  +G + + V Y  LI G  + G +  A  +++ + ++    D   +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           +I GLC+                   G++ +A  + N+M   G + +  T  +L++G+ +
Sbjct: 121 VICGLCRC------------------GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           + ++E A  L  +M + G +P VV+Y  L +GLCK+ +   A   + EM  KG + ++ T
Sbjct: 163 SGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L+NGLC+S  I  A+KL  +    G  PD   +  L+   C  G++  A +L   M 
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
            R   P ++T+N LM+G   +G  +    +   +LE+ + P+  +YN  +K  C  + M 
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342

Query: 591 DAFEFLNDALCRGILPTTITWHILVRA 617
              E       RG++P + T++IL++ 
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKG 369



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 17/296 (5%)

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D  ++  +ING C  G L K ++++ E++  G                  G++ DA  ++
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M   G   +     +L++GF +   ++ A  LF EM ++   P  ++Y  +I GLC+ 
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA     +M  +G +PD +TY+ LI+G C+S +++ A  L  Q +Q G TP+V  Y
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             L  GLC  G+V+ A +L   M  +    N+ TYN+L++GL K+G+  +A+++   +  
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             + PD I++   +   C    M  A E L + L RG+ PT IT+++L+     +G
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 167/333 (50%), Gaps = 20/333 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +A +  N ++ +G++PD  +Y T+I+G  KSG++  A ++ ++M + G+  N
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L DG  K G    A E+   +  +  +  N+ TYN ++NGLCK G   + +++ 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGK-GLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+      D+ T+ + +   CK G +  A  + REM++ G+    +T+N +++GFC +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +++   L   M  KG + N  +YN L++       +     I++ +  +    DS T+
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI G CK                     + +A  L   M + G  L A + NS++ GF
Sbjct: 364 NILIKGHCK------------------ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGF 405

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
            +  K+  A  LF+EM R+G +     YN  ++
Sbjct: 406 FKKKKISEARELFEEMRREGMAADAEIYNLFVD 438


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 250/522 (47%), Gaps = 56/522 (10%)

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDY 186
           E GL PD ++Y  ++ GL ++G L  A  +F +M  R G   +   Y ILI G    G  
Sbjct: 118 EAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRI 177

Query: 187 MRAKEIWERL----------------------------------VMETSVYPNVVTYNVM 212
             A  ++ ++                                  ++   V PNVVTYN +
Sbjct: 178 DDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           I GLC+ GRFD+  ++ ++M+      D +TY   +HGLCK G V    +V  E +  G+
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
            ++ +TYNA+I+G+C+ G +K   ++ ++M R      V ++N +I G    GKV +A++
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---------------- 375
               +     + ++ T   LI+G C  G    A+++L+ +EE G                
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417

Query: 376 -EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
            EG+L +A SL + +   G K +     SL++G+ Q   +++A  L ++M+ + C P V 
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVH 477

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +YNTLI+GLCKV+R   A   + +M ++G +P   T+++LI  +   KK   A K+  Q 
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 495 LQKGFTPDVTMYNILIHG--LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  G  PD   Y + I       A K E+       M +    P++ TYN ++      G
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
             +KA      +L   + PD  +Y+I L  +C+    SDAF+
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCN-KDDSDAFD 638



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 230/467 (49%), Gaps = 21/467 (4%)

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           LA F  M + G   N   YN LI+   K      A+    R+  E  + P+  TYN ++ 
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRM-REAGLAPDTFTYNCLML 133

Query: 215 GLCKCGRFDECLEMWDRMKKNERE-KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           GLC+ G       ++ +M +      D ++Y   I GLC AG ++ A RV+ +M      
Sbjct: 134 GLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCR 193

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
               TY  ++DG C+  ++ E   L   M  KG + NVV+YN LI GL + G+ D+   +
Sbjct: 194 PGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKL 253

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            E +  +  + D  T+  +++GLCK+G +    ++L+E                      
Sbjct: 254 LEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI------------------GK 295

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G  L   T N+L+NG+ +   ++ A+ + + M R   +P V ++N +I+G C   +  +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +F+ +M   G  P+ +T++ LI+G C   +  +AL+L     + G  PD   Y I I  
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDA 415

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC  G++E+A  L+S +  +    + V Y +L+ G  + GD D A  +   +  E   PD
Sbjct: 416 LCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPD 475

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           + +YN  + GLC   R+  A + L+    +GI PTT T++IL++ ++
Sbjct: 476 VHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 235/503 (46%), Gaps = 19/503 (3%)

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
             ++ + G  P+  +Y T+IN   K   L  A A    M E G+  +   YN L+ G  +
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G    A  ++ ++        +  +Y ++I GLC  GR D+   ++ +M +        
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           TY   + GLCK   V  AE +  EMV  G+  + VTYNA+I G C+ G+  +  +L E M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 303 G-RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
             ++   +  +Y  ++ GL ++GKV     +      K    +  T+  LING CK G +
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
             A+ +L  ++              NR++         T N +++GF    K+  A+   
Sbjct: 318 KAALDVLQLMKR-------------NRVNP-----GVQTFNEVIHGFCCGGKVHKAMAFL 359

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +M+  G SP  V++N+LI+G C V     A   +  M E G  PD  TY++ I+ LC  
Sbjct: 360 TQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDE 419

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            +++ A  L      KG      +Y  L+HG C  G ++ A  L   M   NC+P++ TY
Sbjct: 420 GQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTY 479

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+DGL K    D+A+++ + + ++ + P   ++NI +K +    + +DA +     + 
Sbjct: 480 NTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMIS 539

Query: 602 RGILPTTITWHILVRAVMNNGAS 624
            G  P   T+ + +      GA+
Sbjct: 540 SGCKPDKQTYTLKISTDWFEGAT 562



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 242/549 (44%), Gaps = 35/549 (6%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           G LC++ +F+   + L  +  +   PD ++Y  V++GL K G +     V  E   +GV 
Sbjct: 239 GGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVA 298

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
             V+ YN LI+G+ K GD   A ++ + L+    V P V T+N +I+G C  G+  + + 
Sbjct: 299 LEVLTYNALINGYCKGGDMKAALDVLQ-LMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
              +M       ++ T+ S I G C  G  + A R+   M E G+  D  TY   ID  C
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
             G+++E   L+  +  KG   + V Y  L+ G  + G +D A  + E +  +NC  D  
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVH 477

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+  LI+GLCK   L++AI +L+++++ G                 + + ADAA +  +M
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 390 DKHGCKLN--AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
              GCK +   YT     + F  A+K EN      EM   G  P V +YN +I       
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM--------------ALKLCCQ 493
              +A+    +ML     PD  TYS+L+N +C     D                 +L  Q
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQ 657

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             +    P ++ Y  L+ GLC+  ++E+   L   M+  + + +    + L+        
Sbjct: 658 MCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEM 717

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
             +A E +  +  +  +P + S  + L GLC       A    +D L  G     + W +
Sbjct: 718 YREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKL 777

Query: 614 LVRAVMNNG 622
           L+  +   G
Sbjct: 778 LIDCLHEKG 786



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 18/443 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C   + + A R L+ + E G+ PD  +Y   I+ L   G L  A ++F  +  +G++ + 
Sbjct: 382 CSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHN 441

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  L+ G+ + GD   A  + E++  E  + P+V TYN +I+GLCK  R D  +++ D
Sbjct: 442 VIYTSLVHGYCQVGDIDSAFGLMEKMASENCM-PDVHTYNTLIDGLCKVKRLDRAIDLLD 500

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI--DGFCR 288
           +MKK   E  + T+   I  +        A ++Y +M+ SG   D  TY   I  D F  
Sbjct: 501 KMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEG 560

Query: 289 AGKIKECFELWEV-MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           A K +E  ++  V M   G   +V +YN +I+  ++ G  ++A      +     + D T
Sbjct: 561 ATK-EENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCT 619

Query: 347 THGVLINGLC----KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
           T+ +L+N +C     + + N+ I  + +V    E        L  +M +        T  
Sbjct: 620 TYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQE--------LFEQMCESDAAPGISTYK 671

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           +L+ G     +LE   +L  +M            + L+   C +E + EA    + M  +
Sbjct: 672 ALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQ 731

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
            ++P + +  LL++GLC S    MA+ +    L  G+  D  ++ +LI  L   G     
Sbjct: 732 SFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGAC 791

Query: 523 LQLYSNMKKRNCVPNLVTYNTLM 545
           L++ S M  + CV +  TY +L+
Sbjct: 792 LEMLSVMDAKKCVASTRTYASLV 814



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 1/214 (0%)

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +A +L + +  F  M + G  P   +YNTLIN  CK+    +A + +  M E G  PD  
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           TY+ L+ GLC++  +  A  L  Q  ++ G   D   Y ILI GLC+AG+++DA ++++ 
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +  C P + TY  L+DGL K     +A  +   ++ + + P++++YN  + GLC   R
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             D  + L     +   P   T+  +V  +  +G
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHG 280


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 162/603 (26%), Positives = 291/603 (48%), Gaps = 43/603 (7%)

Query: 18  PHTALALFDSATREPGYAHSPHLFH--HIL----RRLIDPKL-VVHVSRILELIEIQKCY 70
           P  A+ LF    R     HSP   H  +IL    RR+  P L +  V R+L     +   
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL-----KNGL 207

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI--LCRKRQFEKAKRF 122
            P+D + S+I  + K+   DKA  +F  M E      I  C + I  LC+ ++ +KA+  
Sbjct: 208 GPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           +  + + G+ PD+++Y  +I+GL KS  +  A  V ++M E G   N + YN LI G+  
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
            G +  +  +++++     V P V   N  I+ L K GR +E   ++D M     + D  
Sbjct: 328 SGMWNESVRVFKQMS-SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 386

Query: 243 TYCSFIHGLCKAGNVE---GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +Y +    +C             ++  M+  GI  +   +N +I+ + R G + +   ++
Sbjct: 387 SYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIF 446

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           E M  KG + + V++  +I  L   G++D+A+  +  + +         +G LI G C +
Sbjct: 447 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH 506

Query: 359 GYLNKAIQILNE-----VEEGG-------------EGRLADAASLVNRMDKHGCKLNAYT 400
           G L KA ++++E     +   G             EGR+A+   +++ M + G + N  T
Sbjct: 507 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 566

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            NSLM G+     +E A  L   M+  G  P    Y TL++G CK  R  +A +  ++ML
Sbjct: 567 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 626

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
            KG KP  + YS++++GL Q+++   A K+  + ++ G T  +  Y +++ GLC     +
Sbjct: 627 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 686

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           +A  L   +   N   +++T+N ++  +FK G   +A E+++ I    L P+I +Y++ +
Sbjct: 687 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 746

Query: 581 KGL 583
             L
Sbjct: 747 TNL 749



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 272/596 (45%), Gaps = 71/596 (11%)

Query: 89  PDKALDVFQRMNE----------IFGCEAGILCRKR--QFEKAKRFLNSLWEKGLKPDVY 136
           P  A+++F+RM+           I      I C +R  + +     +  L + GL PD +
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 212

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY ++I G VK G++  A  +F EM E+GV   ++  N +I    K  +  +A+ I +++
Sbjct: 213 SY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 271

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V ++ + P++ TY+++I+GLCK    D+   + ++M +     +S TY S IHG   +G 
Sbjct: 272 V-DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY-- 313
              + RV+++M   G+       N+ I    + G+  E   +++ M  KG   +++SY  
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390

Query: 314 ------------------------------------NILIRGLLENGKVDEAISIWELLR 337
                                               NILI      G +D+A+ I+E ++
Sbjct: 391 NASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 450

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
            K    D+ T   +I+ LC+ G L+ A+   N + + G                  G L 
Sbjct: 451 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 510

Query: 381 DAASLVNRM-DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            A  L++ M +K          +S++N   +  ++     +   M + G  P VV++N+L
Sbjct: 511 KAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 570

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           + G C V    EA++ +  M   G +P+   Y  L++G C++ +ID AL +    L KG 
Sbjct: 571 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 630

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            P   +Y+I++HGL  A +   A +++  M +     ++ TY  ++ GL +    D+A  
Sbjct: 631 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 690

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +   +    ++ DII++NI +  +    R  +A E  +     G++P   T+ +++
Sbjct: 691 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 746



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 239/497 (48%), Gaps = 23/497 (4%)

Query: 133 PDVYSYGTVINGL--VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           P +++Y  +I+    V   DL   LA+   + + G+  +   Y+ LI GF K G+  +A 
Sbjct: 174 PTIHTYNILIDCYRRVHRPDL--GLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 230

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            ++  + ME  V P ++  N +I  LCK    D+   +  +M  +    D FTY   I G
Sbjct: 231 CLFLEM-MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV 310
           LCK+  ++ AERV  +MVE+G   +++TYN++I G+  +G   E   +++ M   G +  
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 311 VSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V   N  I  L ++G+ +EA  I++ +  K    D  ++    + +C   +    + ++ 
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY--WYVTVVWVMW 407

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                         ++ N M   G   N +  N L+N + +   ++ A+ +F++M  KG 
Sbjct: 408 H-------------NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 454

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V++ T+I+ LC++ R  +A      M++ G  P    Y  LI G C   ++  A +
Sbjct: 455 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 514

Query: 490 LCCQFLQKGFTPD-VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           L  + + K   P  V  ++ +I+ LC  G+V +   +   M +    PN+VT+N+LM+G 
Sbjct: 515 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
              G+ ++A  + + +    + P+   Y   + G C   R+ DA     D L +G+ PT+
Sbjct: 575 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 634

Query: 609 ITWHILVRAVMNNGAST 625
           + + I++  +     +T
Sbjct: 635 VLYSIILHGLFQARRTT 651



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 255/549 (46%), Gaps = 36/549 (6%)

Query: 37  SPHLFHH--ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKAL 93
           +P LF +  I+  L   K +    R+LE + ++    P  +   S+I  Y  + M ++++
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 94  DVFQRMNE------IFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
            VF++M+       +  C + I  L +  +  +AK   +S+  KG KPD+ SY T  + +
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWV 395

Query: 146 VKSGDLLGALA---VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
                 +  +    +F+ M  +G+  N   +NILI+ + + G   +A  I+E +     +
Sbjct: 396 CYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGM 454

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            P+ VT+  +I+ LC+ GR D+ L  ++ M           Y   I G C  G +  A+ 
Sbjct: 455 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 514

Query: 263 VYREMVESGIFVDAVTY-NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
           +  EM+   I    V Y +++I+  C+ G++ E  ++ ++M + G   NVV++N L+ G 
Sbjct: 515 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G ++EA ++ + +       +   +G L++G CKNG                  R+ 
Sbjct: 575 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG------------------RID 616

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           DA ++   M   G K  +   + +++G  QA +   A  +F EM   G + ++ +Y  ++
Sbjct: 617 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 676

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
            GLC+     EA   ++++     K D+IT++++I+ + +  +   A +L       G  
Sbjct: 677 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 736

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P++  Y+++I  L      E+A  L+ +++K     +    N ++  L    +  KA   
Sbjct: 737 PNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 796

Query: 561 WNHILEERL 569
            + I E  L
Sbjct: 797 LSIIGENNL 805



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 18/393 (4%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            +KA      +  KG+ PD  ++ TVI+ L + G L  AL  F+ M + GV  +   Y  
Sbjct: 439 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 498

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           LI G    G+ ++AKE+   ++ +    P V  ++ +IN LCK GR  E  ++ D M + 
Sbjct: 499 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 558

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
            +  +  T+ S + G C  GN+E A  +   M   GI  +   Y  ++DG+C+ G+I + 
Sbjct: 559 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618

Query: 296 FELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
             ++  M  KG     V Y+I++ GL +  +   A  ++  + E        T+GV++ G
Sbjct: 619 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 678

Query: 355 LCKNGYLNKAIQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLN 397
           LC+N   ++A  +L ++                      GR  +A  L + +  +G   N
Sbjct: 679 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 738

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
             T + ++   I+    E A  LF  + + G +      N ++  L       +A +++ 
Sbjct: 739 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 798

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
            + E     +  T SLL +   +  K    +KL
Sbjct: 799 IIGENNLTLEASTISLLASLFSREGKYREHIKL 831



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 9/229 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +++  Y KN   D AL VF+ M        + ++      L + R+   AK+  + + E 
Sbjct: 604 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 663

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G    +++YG V+ GL ++     A  + +++F   V+ +++ +NI+I   FK G    A
Sbjct: 664 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 723

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           KE+++  +    + PN+ TY++MI  L K   ++E   ++  ++K+    DS      + 
Sbjct: 724 KELFDA-ISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 782

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            L     V  A      + E+ + ++A T + +   F R GK +E  +L
Sbjct: 783 MLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 831


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 254/516 (49%), Gaps = 23/516 (4%)

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           C   +L    +++  +   + + + G++P +++Y T+++   K+G +  A+A+  +M  R
Sbjct: 199 CVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEAR 258

Query: 165 --GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G   N V YN++I+G  +KG+  +A ++ +  +M  S   +  TYN +I GL      
Sbjct: 259 AAGCLPNDVTYNVVINGLARKGELEKAAQLVD--IMRLSKKASAFTYNPLITGLLARDFV 316

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++   +   M+         TY + I GL K GN E A+  + EM   G+  D +TYN++
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+G+C+AG +K+   L+  + R G    V++YNILI G    G ++ A  + E + E++C
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDC 436

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-----------------GRLADAAS 384
             D  T+ +L+NG C    L       +E+   G                  G + +A  
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ 496

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L   M   G   +  T N L++G  +   L++A  L+ +M   G     V+Y  LI+  C
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +  R  EA +    M+  G  P ++TY++ I+  C+   + +A     + L++G  P+  
Sbjct: 557 ERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEV 616

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN+L+H LC  G+ E A Q +  M +R  VPN  TY  L+DG  K G+   A+ ++  +
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM 676

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
            ++ + PD  ++N   KG      M DA ++L + +
Sbjct: 677 HQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENVV 711



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 225/469 (47%), Gaps = 21/469 (4%)

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMIN 214
           AV+ +M + GVE ++  YN L+D F K G   +A  + + +    +   PN VTYNV+IN
Sbjct: 215 AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVIN 274

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           GL + G  ++  ++ D M+ + ++  +FTY   I GL     VE A  +  EM   GI  
Sbjct: 275 GLARKGELEKAAQLVDIMRLS-KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVP 333

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW 333
             VTYN +IDG  + G  +     ++ M  KG L ++++YN LI G  + G + +A+ ++
Sbjct: 334 TVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLF 393

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             L+         T+ +LI+G C+ G L  A ++  E                  M +  
Sbjct: 394 GDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE------------------MTEED 435

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C  +  T   LMNG      L      F EM  KG  P   +YNT I+    +     A+
Sbjct: 436 CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAF 495

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +EM+ +G   D +TY++LI+GLC++  +  A  L  + +  G   D   Y  LIH  
Sbjct: 496 QLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAH 555

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C  G++ +A  ++  M      P++VTY   +    + G+   A   +  +LEE + P+ 
Sbjct: 556 CERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNE 615

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++YN+ +  LC   R   A++  ++ L RG++P   T+ +L+      G
Sbjct: 616 VTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEG 664



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 175/363 (48%), Gaps = 55/363 (15%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLE 322
           VY +M++ G+     TYN ++D FC+A                                 
Sbjct: 216 VYSDMLQLGVEPSIFTYNTLLDSFCKA--------------------------------- 242

Query: 323 NGKVDEAISIWELL--REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            G++D+A+++ + +  R   C  +  T+ V+INGL + G L KA Q+++           
Sbjct: 243 -GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD----------- 290

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
                + R+ K   K +A+T N L+ G +    +E A  L  EM  +G  PTVV+YNTLI
Sbjct: 291 -----IMRLSK---KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLI 342

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GL K      A     EM  KG  PD+ITY+ LING C++  +  AL L     + G  
Sbjct: 343 DGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLG 402

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P V  YNILI G C  G +E A +L   M + +C+P++ TY  LM+G     +       
Sbjct: 403 PTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIF 462

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ +L + L PD  +YN  +    +   +++AF+   + + RGI   T+T+++L+  +  
Sbjct: 463 FDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCK 522

Query: 621 NGA 623
            G+
Sbjct: 523 TGS 525



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 18/333 (5%)

Query: 294 ECFELWEVMGRKGCLNVVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           +C   ++ M R G    V   N ++R L +  + D+  +++  + +        T+  L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +  CK G +++A+ +L ++E       A AA         GC  N  T N ++NG  +  
Sbjct: 237 DSFCKAGRMDQAVALLKDME-------ARAA---------GCLPNDVTYNVVINGLARKG 280

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +LE A  L   M R     +  +YN LI GL   +   +A + + EM  +G  P ++TY+
Sbjct: 281 ELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYN 339

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+GL ++   + A     +   KG  PD+  YN LI+G C AG ++ AL L+ ++K+ 
Sbjct: 340 TLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P ++TYN L+DG  + GD + A  +   + EE   PD+ +Y I + G C    ++  
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             F ++ L +G+ P    ++  + A +  GA T
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAIT 492



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 38/244 (15%)

Query: 409 IQASKLENAIFLFKEMSRKGCS-----------------------------------PTV 433
           + AS     +  F+EM+R G +                                   P++
Sbjct: 170 VPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSI 229

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEK--GWKPDMITYSLLINGLCQSKKIDMALKLC 491
            +YNTL++  CK  R  +A + +K+M  +  G  P+ +TY+++INGL +  +++ A +L 
Sbjct: 230 FTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL- 288

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              ++         YN LI GL +   VE A  L   M+    VP +VTYNTL+DGLFKT
Sbjct: 289 VDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKT 348

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G+ + A   ++ +  + L PD+I+YN  + G C    +  A     D    G+ PT +T+
Sbjct: 349 GNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTY 408

Query: 612 HILV 615
           +IL+
Sbjct: 409 NILI 412


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/654 (25%), Positives = 302/654 (46%), Gaps = 51/654 (7%)

Query: 10  NLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKC 69
           N+L   K+   A   F+ A+ + G+ H+ + ++ +   L   +    +S +   I   +C
Sbjct: 100 NVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRC 159

Query: 70  YCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI---------FGCEAGILCRKRQFEKAK 120
                     I+  G   + ++A  +F ++  +         F C    + +    +  +
Sbjct: 160 AMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVE 219

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDG 179
             L  + + G +PD Y+  +V+     S     AL+VF+E++ RG V+ +V+  +IL+  
Sbjct: 220 MRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVL--SILVLT 277

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F K G+  +A E+ ER+  +  +  N  T+ V+I+G  +  R D+ L+++ +M+K+    
Sbjct: 278 FSKCGEVDKAFELIERM-EDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAP 336

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC--RAGKIKECFE 297
           D   Y + I GLC    +E A  +  EM E GI  D    + +I  +C       +   E
Sbjct: 337 DVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYCSEEVDIYRLIEE 395

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN----------------C 341
             E +  +  L  + YN ++ GL+    VD+A  +   +   N                 
Sbjct: 396 RLEDLDTEAML--LLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMV 453

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
             D+T+  ++I+GLC  G L+ A+ +  ++   G                   RL +   
Sbjct: 454 RPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYL 513

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L+  M   G +   +T NS+     +   +  A+ + +EM   G  P +  Y  L+  LC
Sbjct: 514 LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLC 573

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K +R  EA +F+ EM+ +G+ PD++ YS  I+G  + K +D AL++      +G+ PDV 
Sbjct: 574 KRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVV 633

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN LI+G C   +V +A  +   M  +  VP++VTYN L+DG  K GD D+A    + +
Sbjct: 634 AYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRM 693

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           + +   P++I+Y   + GLC+  R  DA    N+   +G  P  I++  L+  +
Sbjct: 694 VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 747



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/656 (25%), Positives = 301/656 (45%), Gaps = 89/656 (13%)

Query: 35  AHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKAL 93
           A SP      +R L    LV   + + + +++ +   P   + + +++A  K+   D   
Sbjct: 160 AMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDL-- 217

Query: 94  DVFQRMNEIFGCEAG-------------ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            V  R+ E+  C++G               C  R+F+KA    N ++ +G   D +    
Sbjct: 218 -VEMRLKEM--CDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSI 273

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++    K G++  A  + + M + G+  N   + +LI GF ++    +A ++++++  ++
Sbjct: 274 LVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKS 332

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-------------------------- 234
              P+V  Y+ +I GLC     ++ L +   MK+                          
Sbjct: 333 GFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRL 392

Query: 235 -NEREKDSFT------YCSFIHGLCKAGNVEGAERVYREM----------------VESG 271
             ER +D  T      Y S ++GL    +V+ A  + R M                V+  
Sbjct: 393 IEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEM 452

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
           +  D  +++ +IDG C  GK+     L+  M R GC  NV+ YN LI  L  + +++E  
Sbjct: 453 VRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECY 512

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE-------------- 376
            + + ++         TH  +   LC+   +  A+ ++ E+   G               
Sbjct: 513 LLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 572

Query: 377 ---GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
               R A+A + +  M + G   +    ++ ++GF++   ++ A+ +F+++  +G  P V
Sbjct: 573 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 632

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YNTLING CKV+R  EA+  + EM+ KG  P ++TY+LLI+G C++  ID A     +
Sbjct: 633 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSR 692

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            + K   P+V  Y  LI GLC+AG+ +DA+ L++ M+ + C PN +++  L+ GL K G 
Sbjct: 693 MVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGW 752

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            D AL ++   + ER  PD I Y   +    S    + AFE L + + +G  P  +
Sbjct: 753 PDAAL-LYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPL 807


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 257/518 (49%), Gaps = 41/518 (7%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L   +++ K + FL+ L    +K + ++  +V + L+  GD   A A+  +M      T
Sbjct: 87  LLANSKKYSKVRSFLDKL----VKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVT 142

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+  ++              A E++ R V +     ++ + N +++ L K     E   +
Sbjct: 143 NLEIHS--------------ACEVFRR-VQDYGFKLSLNSCNPLLSALVKGNETGEMQYV 187

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M K   + +  T+  FI+GLCKAG +  AE V  ++   G   + VTYN +IDG C+
Sbjct: 188 YKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCK 247

Query: 289 AGKIKECFE----LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            G   + +     L E++  K C N +++N LI G  ++  V  A + +E ++ +    +
Sbjct: 248 KGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LINGL  NG L++AI                  +L ++M   G K N  T N+L
Sbjct: 308 IVTYNSLINGLSNNGKLDEAI------------------ALWDKMVGLGLKPNIVTFNAL 349

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NGF +   ++ A  LF +++ +   P  +++NT+I+  CK     E ++    ML++G 
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P++ TY+ LI GLC+++ +  A KL  +        DV  YNILI G C  G+   A +
Sbjct: 410 FPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEK 469

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   M      PN VTYNTLMDG    G+   AL++   + +E  R ++++YN+ +KG C
Sbjct: 470 LLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFC 529

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++ DA   LN+ L +G+ P   T+ ++   ++  G
Sbjct: 530 KTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 193/380 (50%), Gaps = 38/380 (10%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK---SGDLLGALAVFDEMFERGV 166
           LC+  +  KA+  +  +   G  P++ +Y T+I+G  K   +G +  A A+  EM    +
Sbjct: 210 LCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKI 269

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N + +N LIDGF K  + + AK  +E +     + PN+VTYN +INGL   G+ DE +
Sbjct: 270 CPNEITFNTLIDGFCKDENVLAAKNAFEEM-QRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            +WD+M     + +  T+ + I+G CK   ++ A +++ ++ E  +  +A+T+N MID F
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AG ++E F L   M  +G   NV +YN LI GL  N  V  A  +   +      AD 
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADV 448

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
            T+ +LI G CK+G  +KA ++L E+   G                 EG L  A  +  +
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQ 508

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M+K G + N  T N L+ GF +  KLE+A  L  EM  KG +P   +Y+        V R
Sbjct: 509 MEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD--------VVR 560

Query: 449 FGEAYSFVKEMLEKGWKPDM 468
                    EMLEKG+ PD+
Sbjct: 561 L--------EMLEKGFIPDI 572



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 231/456 (50%), Gaps = 33/456 (7%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           ++ AY  N     A +VF+R+ + +G +  +         L +  +  + +     + ++
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQD-YGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD---Y 186
            ++P++ ++   INGL K+G L  A  V +++   G   N+V YN LIDG  KKG     
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKM 254

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            RA  I + + +   + PN +T+N +I+G CK          ++ M++   + +  TY S
Sbjct: 255 YRADAILKEM-LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I+GL   G ++ A  ++ +MV  G+  + VT+NA+I+GFC+   IKE  +L++ +  + 
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            + N +++N +I    + G ++E  ++   + ++    + +T+  LI GLC+N  +  A 
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++LNE                  M+ +  K +  T N L+ G+ +  +   A  L  EM 
Sbjct: 434 KLLNE------------------MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P  V+YNTL++G C       A     +M ++G + +++TY++LI G C++ K++
Sbjct: 476 NVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLE 535

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            A +L  + L+KG  P+ T Y+++   +   G + D
Sbjct: 536 DANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHL--FHHILRRLIDPKLVVHVSR 59
           +++   L+N L        A+AL+D      G    P++  F+ ++      K++    +
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMV---GLGLKPNIVTFNALINGFCKKKMIKEARK 364

Query: 60  ILELIEIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGIL 110
           + + I  Q    P  +   ++I A+ K  M ++   +   M +         + C    L
Sbjct: 365 LFDDIAEQDL-VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR +    AK+ LN +    LK DV +Y  +I G  K G+   A  +  EM   GV+ N 
Sbjct: 424 CRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNH 483

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V YN L+DG+  +G+   A ++  ++  E     NVVTYNV+I G CK G+ ++   + +
Sbjct: 484 VTYNTLMDGYCMEGNLKAALKVRTQMEKEGK-RANVVTYNVLIKGFCKTGKLEDANRLLN 542

Query: 231 RMKKNEREKDSFTY 244
            M +     +  TY
Sbjct: 543 EMLEKGLNPNRTTY 556



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 14/172 (8%)

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           YS V+  L+K  K +  T S + + L        A  L    L   +     + N+ IH 
Sbjct: 94  YSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAY-----VTNLEIHS 148

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C         +++  ++      +L + N L+  L K  +  +   ++  +++ R++P+
Sbjct: 149 AC---------EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPN 199

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + ++NI + GLC   +++ A + + D    G  P  +T++ L+      G++
Sbjct: 200 LTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSA 251


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 272/573 (47%), Gaps = 28/573 (4%)

Query: 79  VIQAYGKNSMPDKALDVFQRMN------EIFGCEA--GILCRKRQFEKAKRFLNSLWEKG 130
           +I+ Y +  M   AL+ F+ M        ++ C    G L ++R+      F   +  + 
Sbjct: 104 LIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARR 163

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + PDV ++  +IN L   G L  A  +  +M E G   +VV YN +++ + KKG Y  A 
Sbjct: 164 VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAAL 223

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+ +++     +  +  TYN++++ LCK  R  +   +  +M+K     +  TY S I+G
Sbjct: 224 ELIDQM-GSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIING 282

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
             K G +  A R+++EM    +  + VTYNA+IDG C  G  ++   + E+M   G   N
Sbjct: 283 FVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPN 342

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            VSY+ L+ GL  + K + + SI E +R          +  +I+GLC+NG LN+++++L+
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 370 EVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           ++ + G                  G++ +   ++ +M K G   N+    +L+  + +  
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            +  A  ++  MSR G        N L++ LCK  + G A  F   M + G  P+ IT+ 
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            +ING   S     A  +  + ++ G  P    Y  L+  LC AGK ++A +L   +   
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYI 582

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               + VTYNT++   FK+G    A+ +++ +++  + PD  +Y I   GL    +M  A
Sbjct: 583 PSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAA 642

Query: 593 FEFLNDALCRG-ILPTTITWHILVRAVMNNGAS 624
             F  + L +G + P  + +   V  +   G S
Sbjct: 643 LHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQS 675



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 242/499 (48%), Gaps = 22/499 (4%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G  P VY+   ++  LVK   +      F EM  R V  +V  +NILI+    +G   +
Sbjct: 127 RGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKK 186

Query: 189 AKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
           A  + ++  ME S Y P+VVTYN ++N  CK GR+   LE+ D+M     E D+ TY   
Sbjct: 187 AGYLLKK--MEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNML 244

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  LCK         + ++M +  I  + +TYN++I+GF + GKI     +++ M     
Sbjct: 245 VDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL 304

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           L N V+YN LI G   +G  ++A++I E++       +  ++  L+NGLC++        
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHA------- 357

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
                      +   + S++ RM  +G  +      ++++G  +   L  ++ L  +M +
Sbjct: 358 -----------KFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK 406

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  P VV+++ LING C+V +       + +M + G  P+ I Y+ LI   C++  +  
Sbjct: 407 DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVE 466

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A K+     + G+  +  + N+L+  LC  GKV  A   + +M K   VPN +T++ +++
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G   +G+  KA  +++ +++    P   +Y   LK LC   +  +A   L+         
Sbjct: 527 GYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAV 586

Query: 607 TTITWHILVRAVMNNGAST 625
            T+T++ ++     +G  T
Sbjct: 587 DTVTYNTILVETFKSGMLT 605



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 251/544 (46%), Gaps = 36/544 (6%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGL----------------KPDVYSYG 139
            + +  +      IL R R +E AK  L  L + G+                K +   + 
Sbjct: 43  LRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFD 102

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            +I   ++ G +  AL  F  M  RG   +V   N+L+ G   K   + A  ++ + ++ 
Sbjct: 103 LLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLL-GKLVKERKVGAVWLFFKEMLA 161

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V P+V T+N++IN LC  G+  +   +  +M+++       TY + ++  CK G  + 
Sbjct: 162 RRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKA 221

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIR 318
           A  +  +M   GI  DA TYN ++D  C+  +  + + L + M ++    N ++YN +I 
Sbjct: 222 ALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIIN 281

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G ++ GK+  A  I++ +   N   +  T+  LI+G C +G   +A+ IL  +E  G   
Sbjct: 282 GFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP-- 339

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                           K N  + ++L+NG  + +K E +  + + M   G     ++Y  
Sbjct: 340 ----------------KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTA 383

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+GLC+     E+   + +ML+ G  PD++T+S+LING C+  KI    ++ C+  + G
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+  +Y  LI+  C  G V +A ++Y  M +     N    N L+  L K G    A 
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
             ++H+ +    P+ I+++  + G  +      AF   ++ +  G  P+  T+  L++A+
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563

Query: 619 MNNG 622
              G
Sbjct: 564 CRAG 567



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 266/575 (46%), Gaps = 29/575 (5%)

Query: 78   SVIQAYGKNSMPDKALDVFQRMNEI------FGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
            ++I  Y K     +A  V+  M+ I      F C   +  LC+  +   A+ F + + + 
Sbjct: 453  TLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKI 512

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G  P+  ++  +ING   SG+ L A ++FDEM + G   +   Y  L+    + G +  A
Sbjct: 513  GNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA 572

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            K + ++L    S   + VTYN ++    K G   + + ++D M +     DS+TY     
Sbjct: 573  KRLLDKLHYIPSAV-DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFA 631

Query: 250  GLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            GL + G +  A   Y  ++  G +  + V Y   +DG  RAG+ K      E M + G C
Sbjct: 632  GLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLC 691

Query: 308  LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS-TTHGVLINGLCKNGYLNKAIQ 366
             ++++ N+++ G    GK+ +A  I+ ++      + S  T+ +L++G  K   L+K   
Sbjct: 692  ADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSN 751

Query: 367  ILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            + N +   G                    L     L+ +M   G  ++  T N L+  + 
Sbjct: 752  LYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYC 811

Query: 410  QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            +  ++  A  L   M+     P + +++++I+ L +V    E++  + EMLE+G  PD  
Sbjct: 812  ETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRR 871

Query: 470  TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
             Y  L+N +C+   I  A KL  +    G +      + L+ GL   GKVE+A  +   M
Sbjct: 872  QYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFM 931

Query: 530  KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +++ +P + T+ TLM    +     +AL++ + +    ++ D+I+YN+ + GLC+   +
Sbjct: 932  LRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDV 991

Query: 590  SDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + A +   +   RG+ P   T+ IL+ A+  N  S
Sbjct: 992  ASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDIS 1026



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 267/593 (45%), Gaps = 33/593 (5%)

Query: 60  ILELIEIQKCYCPEDVALSVIQ----AYGKNSMPDKALDVFQRMNEIFGCEAGI-----L 110
           ILE++E      P +V+ S +      + K  +    L+  +    I GC A       L
Sbjct: 330 ILEMMEATGPK-PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGL 388

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR     ++ + L+ + + G+ PDV ++  +ING  + G +     +  +M++ G+  N 
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMW 229
           + Y  LI  + K GD + A +++  + M    Y  N    NV+++ LCK G+       +
Sbjct: 449 IIYTTLIYNYCKTGDVVEAFKVY--VAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFF 506

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K     +S T+   I+G   +GN   A  ++ EM+++G      TY  ++   CRA
Sbjct: 507 HHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRA 566

Query: 290 GKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE   L + +      ++ V+YN ++    ++G + +A+++++ + ++N   DS T+
Sbjct: 567 GKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTY 626

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMD 390
            ++  GL + G +  A+     +   G                   G+   A      M+
Sbjct: 627 AIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDME 686

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERF 449
           K+G   +    N ++NG+ +  K+  A  +F  M S    SP++ +YN L++G  K +  
Sbjct: 687 KNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNL 746

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +  +    M+  G  PD +T   LI G C+S  +D+ LKL  + L  G   D   +N+L
Sbjct: 747 SKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNML 806

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I   C   +V  A  L + M   +  P++ T+++++  L +     ++  + + +LE   
Sbjct: 807 IMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGC 866

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            PD   Y   +  +C    +  AF+  ++    GI    +    LVR +   G
Sbjct: 867 IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCG 919



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 234/535 (43%), Gaps = 63/535 (11%)

Query: 79   VIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
            +I  YG +    KA  +F  M        +  +G     LCR  +F++AKR L+ L    
Sbjct: 524  IINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIP 583

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
               D  +Y T++    KSG L  A+A+FDEM +R V  +   Y I+  G  ++G  + A 
Sbjct: 584  SAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAAL 643

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM---------------------- 228
              +  L+ + +V P  V Y   ++GL + G+    L                        
Sbjct: 644  HFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNG 703

Query: 229  WDRMKKNEREKDSFT--------------YCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            + RM K  +  D FT              Y   +HG  K  N+     +Y  M+ +GIF 
Sbjct: 704  YSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFP 763

Query: 275  DAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIW 333
            D +T +++I GFC++  +    +L + M   G  ++  ++N+LI    E  +V +A  + 
Sbjct: 764  DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823

Query: 334  ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             ++   +   D TTH             +  I +L+ V    E  L     L++ M + G
Sbjct: 824  NIMNLFDIFPDMTTH-------------DSIISVLSRVSTVQESHL-----LLHEMLERG 865

Query: 394  CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            C  +     +L+N   +   +  A  L  EM   G S   V+ + L+ GL K  +  EA 
Sbjct: 866  CIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAK 925

Query: 454  SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +  ML K   P + T++ L++  C+++ +  ALKL           DV  YN+LI GL
Sbjct: 926  LVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGL 985

Query: 514  CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
            C+ G V  AL+LY  +K+R   PN+ TY  L+D +F         E+    L+ER
Sbjct: 986  CADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQER 1040



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 19/218 (8%)

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
            ++A   ENA  + K +S+ G     V +  L+N           Y   K        P 
Sbjct: 57  LVRARLYENAKSILKHLSQMGVGSKSV-FGALMN----------TYPLCKS------NPS 99

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +  + LLI    +   +  AL+       +GF P V   N+L+  L    KV      + 
Sbjct: 100 V--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFK 157

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M  R   P++ T+N L++ L   G   KA  +   + E    P +++YN  L   C   
Sbjct: 158 EMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKG 217

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           R   A E ++    +GI     T+++LV  +  N  S 
Sbjct: 218 RYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSA 255



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%)

Query: 109  ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
            + CR     +A +  +++    +K DV +Y  +I+GL   GD+  AL ++ E+ +RG+  
Sbjct: 949  MFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            N+  Y ILID  F     +   E+  + + E  V
Sbjct: 1009 NMTTYCILIDAIFTNDISLAKGEVLLKDLQERGV 1042


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 255/512 (49%), Gaps = 20/512 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CRK      +  L+ + +   +PDVYSY  VIN     G    AL + + M E G + +
Sbjct: 267 FCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPS 326

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  +  +ID F K+G+   A++ ++  + +  +  N + YN+MI+G  K     +   ++
Sbjct: 327 IATFCTIIDAFCKEGNVELARKYFDE-IEDMGLSQNTIVYNIMISGYVKARDISQANLLF 385

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M+  +   D  T+ + + G  + G  E   R+ R++  SG+  D+   +  + G C A
Sbjct: 386 EEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWA 445

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+  E  +L E +  KG   +VV++N +I      G  + A   + ++ +      S+T 
Sbjct: 446 GRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTC 505

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+  L + G L++A                   +L + +DK G  +       L++G+
Sbjct: 506 SSLLISLVRKGSLDEA-----------------WIALYDMIDK-GFPVTNMAFTVLLDGY 547

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A  L+ EM  +G  P  V++   INGLC      +AY    +ML KG+ P+ 
Sbjct: 548 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 607

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI G C+  K++ ALKL  +  ++G  PD+   N++I GLC  G+++ A++ + +
Sbjct: 608 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMD 667

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +    P++VTYNTL+DG  K  D   A ++   + +    PD+ +YNI + G C+  +
Sbjct: 668 MCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRK 727

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           ++ A   L + +  GI+P T+T++ ++ AV N
Sbjct: 728 INRAVMILEELISVGIVPNTVTYNTMINAVCN 759



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 276/607 (45%), Gaps = 74/607 (12%)

Query: 27  SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA---- 82
           S  RE G   +P     + R LI       V ++   + ++K  CP +   +++      
Sbjct: 211 SKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV-VRKGPCPNNFTFNLLILEFCR 269

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKP 133
            G   + +  L V  +    F CE  +          C K Q   A   LN + E G KP
Sbjct: 270 KGWTRIGEALLHVMGK----FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP 325

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
            + ++ T+I+   K G++  A   FDE+ + G+  N + YNI+I G+ K  D  +A  ++
Sbjct: 326 SIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLF 385

Query: 194 ERLVMETSVYPNVVTYN-----------------------------------VMINGLCK 218
           E +  +  + P+ +T+N                                   V + GLC 
Sbjct: 386 EEMRTK-DIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 444

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            GR+DE +++ + + +         + S I     AG  E A   Y  MV+ G+   + T
Sbjct: 445 AGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 504

Query: 279 YNAMIDGFCRAGKIKECF-ELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
            ++++    R G + E +  L++++ +   +  +++ +L+ G    G V+ A S+W  ++
Sbjct: 505 CSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK 564

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLA 380
            +    D+      INGLC +G +  A  + +++   G                  G+L 
Sbjct: 565 GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLN 624

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  LV  M+K G   + +T N ++ G  +  +++ AI  F +M R G SP +V+YNTLI
Sbjct: 625 EALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK    G A   + +M + GW+PD+ TY++ I+G C  +KI+ A+ +  + +  G  
Sbjct: 685 DGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 744

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+   YN +I+ +C+   ++ A+ L + + K   VPN VT N L+    K G  +KA+  
Sbjct: 745 PNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI-F 802

Query: 561 WNHILEE 567
           W   L E
Sbjct: 803 WGQKLSE 809



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 221/507 (43%), Gaps = 34/507 (6%)

Query: 118 KAKRFLNSLWE--KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           ++K     +WE  +  + D     T++   VKS     AL +  +M E GV  N    +I
Sbjct: 168 RSKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISI 227

Query: 176 LIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCG--RFDECLEMWDR 231
           L     + GD      +W+    V+     PN  T+N++I   C+ G  R  E L     
Sbjct: 228 LFRLLIRAGD---CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEAL--LHV 282

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M K   E D ++Y   I+  C  G    A  +   M+E+G      T+  +ID FC+ G 
Sbjct: 283 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 342

Query: 292 I---KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           +   ++ F+  E MG     N + YNI+I G ++   + +A  ++E +R K+   D  T 
Sbjct: 343 VELARKYFDEIEDMGLSQ--NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITF 400

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+ G  + G            EE G   L D       +   G   ++  C+  + G 
Sbjct: 401 NTLVAGHYRYGK-----------EEDGNRLLRD-------LSVSGLLHDSSLCDVTVAGL 442

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A + + A+ L + +  KG  P+VV++N++I           A+     M++ G  P  
Sbjct: 443 CWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSS 502

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            T S L+  L +   +D A       + KGF      + +L+ G    G V  A  L++ 
Sbjct: 503 STCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNE 562

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           MK R   P+ V +   ++GL  +G    A ++++ +L +   P+   YN  + G C   +
Sbjct: 563 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 622

Query: 589 MSDAFEFLNDALCRGILPTTITWHILV 615
           +++A + + +   RG+LP   T ++++
Sbjct: 623 LNEALKLVREMNKRGLLPDIFTVNMII 649



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 128/292 (43%), Gaps = 49/292 (16%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+   N +  +G+ PD  ++   INGL  SG +  A  VF +M  +G   N   YN LI 
Sbjct: 556 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIG 615

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           GF K G    A ++  R + +  + P++ T N++I GLCK GR    +E +  M +    
Sbjct: 616 GFCKVGKLNEALKL-VREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 674

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            D  TY + I G CKA +V GA+ +  +M +SG   D  TYN  I G+C   KI     +
Sbjct: 675 PDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMI 734

Query: 299 WEVMGRKGCL-----------------------------------NVVSYNILIRGLLEN 323
            E +   G +                                   N V+ N+L+    + 
Sbjct: 735 LEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQ 794

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           G  ++AI   + L E + + D TTH +          +N+A + L   EEGG
Sbjct: 795 GMPEKAIFWGQKLSEIHLDFDETTHKL----------MNRAYRAL---EEGG 833



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 19/311 (6%)

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  +WE    +   +D +    L+    K+    +A++IL+++ E G      A S++ R
Sbjct: 173 AAFMWE--GHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFR 230

Query: 389 M-----------------DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           +                  + G   N +T N L+  F +         L   M +  C P
Sbjct: 231 LLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEP 290

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V SYN +IN  C   +   A   +  M+E G KP + T+  +I+  C+   +++A K  
Sbjct: 291 DVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYF 350

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G + +  +YNI+I G   A  +  A  L+  M+ ++ VP+ +T+NTL+ G ++ 
Sbjct: 351 DEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRY 410

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  +    +   +    L  D    ++T+ GLC   R  +A + L + L +GI P+ + +
Sbjct: 411 GKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAF 470

Query: 612 HILVRAVMNNG 622
           + ++ A  N G
Sbjct: 471 NSIIAAYGNAG 481


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 268/570 (47%), Gaps = 32/570 (5%)

Query: 78   SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
            ++I  + ++    +A+ V+  MN      + F C   +  LCR  +  +A++FL  +   
Sbjct: 1269 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 1328

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            GL P+  +Y  +ING    GD L A + FD+M + G   +   Y  L+ G  K G+ + A
Sbjct: 1329 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 1388

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            K+   RL        +V+ YN ++   CK G   E + ++D+M +N    DS+TY S + 
Sbjct: 1389 KKFLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 1447

Query: 250  GLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            GLC+ G    A  ++   +  G +F + V Y  ++DG  +AG  K  F  +E M +KG C
Sbjct: 1448 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 1507

Query: 308  LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             + V++N +I      G++ +A   +  +R      +  T+ +L++G  K   L + + +
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567

Query: 368  LNEVEEGGEGRLAD-------------------AASLVNRMDKHGCKLNAYTCNSLMNGF 408
             + +    EG   D                      L+ +M   G   + +T N L+N +
Sbjct: 1568 YSTMMR--EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 1625

Query: 409  IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             ++ K+  A  L   M+  G  P   +YN + NGL K   F E+   + EMLE G  P  
Sbjct: 1626 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 1685

Query: 469  ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
              Y  LING+C+   I  A KL  +    GF       + ++ GL   GK EDA+ +  +
Sbjct: 1686 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 1745

Query: 529  MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            M +   +P + T+ TLM    +     +AL++   +    L+ D+++YN+ + G+C+   
Sbjct: 1746 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1805

Query: 589  MSDAFEFLNDALCRGILPTTITWHILVRAV 618
             + AFE   +   R + P   T+ +LV A+
Sbjct: 1806 SAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 260/556 (46%), Gaps = 28/556 (5%)

Query: 79   VIQAYGKNSMPDKALDVFQRMN------EIFGCEA--GILCRKRQFEKAKRFLNSLWEKG 130
            +I+ Y K  M D A++ F+ +        ++ C      + + ++ E        + +KG
Sbjct: 920  LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 979

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            + P+V ++  +INGL   G+L  A  +  +M E G    +V YN L++ + KKG Y  A 
Sbjct: 980  ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            E+ + ++ +  +  +V TYNV I+ LC   R  +   +  +M+K     +  TY + I+G
Sbjct: 1040 ELIDYMICK-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 251  LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
              K G +  A +V+ EM +  +  + VTYNA+I G C  G  +E   L + M   G  LN
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158

Query: 310  VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
             V+Y  L+ GL ++ K + A  + E +R  +       + VLI+GLCKNG L++A+Q   
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ--- 1215

Query: 370  EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                           LV  M K G   +  T +SL+NGF +   +++A  +   M R G 
Sbjct: 1216 ---------------LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260

Query: 430  SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
                + Y+TLI   C+     EA      M   G   D  T ++L++ LC+  K+  A K
Sbjct: 1261 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320

Query: 490  LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              C   + G  P+   Y+ +I+G  S G   +A   + +M K    P+  TY +L+ GL 
Sbjct: 1321 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380

Query: 550  KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            K G+  +A +  N +       D + YN  L   C    + +A    +  +   +LP + 
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440

Query: 610  TWHILVRAVMNNGAST 625
            T+  L+  +   G + 
Sbjct: 1441 TYSSLLTGLCRKGKAV 1456



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 254/547 (46%), Gaps = 42/547 (7%)

Query: 96   FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
             + +  ++   A IL + R ++ AK  L  L + G+                     G+ 
Sbjct: 859  LKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGI---------------------GSK 897

Query: 156  AVFDEMFERGVETNVV--CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
            ++F  + +     N +   +++LI  + K+G    A E +E LV      P+V T N+++
Sbjct: 898  SIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE-LVGLVGFKPSVYTCNMIL 956

Query: 214  NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
              + K  R +    ++  M       +  T+   I+GLC  GN++ A  + ++M E+G  
Sbjct: 957  ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV 1016

Query: 274  VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
               VTYN +++ +C+ G+ K   EL + M  KG   +V +YN+ I  L  N +  +A  +
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 1076

Query: 333  WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------GGE-- 376
             + +R++  + +  T+  LING  K G +  A Q+ NE+ +              GG   
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136

Query: 377  -GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             G   +A  L++ M+  G +LN  T  +L+NG  +  K E A  L + M         ++
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 1196

Query: 436  YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            Y  LI+GLCK     EA   V  M + G  PD+ITYS LING C+   I  A ++ C+  
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256

Query: 496  QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            + G   +  +Y+ LI+  C  G V +A+++Y+ M       +  T N L+  L + G   
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 556  KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +A +   H+    L P+ I+Y+  + G  S     +AF F +D +  G  P+  T+  L+
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 1376

Query: 616  RAVMNNG 622
            + +   G
Sbjct: 1377 KGLCKGG 1383



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 265/586 (45%), Gaps = 64/586 (10%)

Query: 98   RMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
            R+NE+ +G     LC+  +FE AKR L  +    +     +Y  +I+GL K+G L  A+ 
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 157  VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
            +   M++ GV  +V+ Y+ LI+GF + G+   AKEI  R+   + +  N + Y+ +I   
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY-RSGLVLNKIIYSTLIYNF 1274

Query: 217  CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
            C+ G   E ++++  M  N    D FT    +  LC+ G +  AE+    M   G+  ++
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334

Query: 277  VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
            +TY+ +I+G+   G     F  ++ M + G   +  +Y  L++GL + G + EA      
Sbjct: 1335 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 1394

Query: 336  LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA---ASLVNRMDKH 392
            L       DS  +  L+   CK+G L++A+ + +++ +     L D+   +SL+  + + 
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ--NNVLPDSYTYSSLLTGLCRK 1452

Query: 393  GCKLNA-------------------YTCNSLMNGFIQASKLENAIFLFKEMSRKG----- 428
            G  + A                   YTC  L++G  +A   + A + F+EM +KG     
Sbjct: 1453 GKAVTAVCLFGTAMGRGTLFPNHVMYTC--LVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 1510

Query: 429  ---------CS---------------------PTVVSYNTLINGLCKVERFGEAYSFVKE 458
                     CS                     P + +YN L++G  K +      S    
Sbjct: 1511 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 1570

Query: 459  MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
            M+ +G  PD +T+  LI GL +S   D+ +KL  + + +G   D   +NILI+    +GK
Sbjct: 1571 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 1630

Query: 519  VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            +  A  L + M      P+  TYN + +GL K     ++  + + +LE  + P    Y  
Sbjct: 1631 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 1690

Query: 579  TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             + G+C    +  AF+  ++    G     +    +VR +++ G +
Sbjct: 1691 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 1736



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 34/416 (8%)

Query: 244  YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV----------------TYNAMIDGFC 287
            YC   H L KA   + A+ + R + + GI   ++                 ++ +I  + 
Sbjct: 866  YCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYL 925

Query: 288  RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            + G I    E +E++G  G   +V + N+++  ++++ + +   S++  + +K    +  
Sbjct: 926  KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 985

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
            T  +LINGLC  G L KA  +L ++EE G                 +GR   A  L++ M
Sbjct: 986  TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045

Query: 390  DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
               G + +  T N  ++      +   A  L K+M ++  SP  V+YNTLING  K  + 
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 1105

Query: 450  GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            G A     EM +    P+ +TY+ LI G C     + AL+L       G   +   Y  L
Sbjct: 1106 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 1165

Query: 510  IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
            ++GLC   K E A +L   M+  + V   + Y  L+DGL K G  D+A+++  ++ ++ +
Sbjct: 1166 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 1225

Query: 570  RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
             PD+I+Y+  + G C    +  A E +      G++   I +  L+     +G  T
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVT 1281



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 9/239 (3%)

Query: 79   VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
            +I  Y ++    KA D+   MN        + +      L +K  F ++   L+ + E G
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 1680

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            + P    Y T+ING+ + GD+ GA  + DEM   G  ++ V  + ++ G    G    A 
Sbjct: 1681 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM 1740

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
             + + + +   + P + T+  +++  C+  +  E L++   M+    + D   Y   I G
Sbjct: 1741 LVLDHM-LRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1799

Query: 251  LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            +C  G+   A  +Y EM    +  +  TY  ++D    A  + +  +L   +  +G ++
Sbjct: 1800 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1858


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 211/407 (51%), Gaps = 20/407 (4%)

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           +A+ D M  +G + ++V Y ++++G  K+GD   A  +  ++  +  + P V+ YN +I+
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIID 59

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           GLCK    D+ L ++  M+      +  TY S I  LC  G    A R+  +M+E  I  
Sbjct: 60  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           D  T++A+ID F + GK+ E  +L++ M ++    ++V+Y+ LI G   + ++DEA  ++
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           E +  K+C  D  T+  LI G CK             VEEG E        +   M + G
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCK----------YKRVEEGME--------VFREMSQRG 221

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N  T N L+ G  QA   + A  +FKEM   G  P +++YNTL++GLCK  +  +A 
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 281

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              + +     +P + TY+++I G+C++ K++    L C    KG  PDV  YN +I G 
Sbjct: 282 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 341

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           C  G  E+A  L+  MK+   +PN   YNTL+    + GD + + E+
Sbjct: 342 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 388



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 213/411 (51%), Gaps = 22/411 (5%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            ++ +  KG +PD+ +YG V+NGL K GD   A  + ++M +  +E  V+ YN +IDG  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 182 KKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
           K      A  +++   MET  + PNVVTY+ +I+ LC  GR+ +   +   M + +   D
Sbjct: 63  KYKHMDDALNLFKE--METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            FT+ + I    K G +  AE++Y EMV+  I    VTY+++I+GFC   ++ E  +++E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  K C  +VV+YN LI+G  +  +V+E + ++  + ++    ++ T+ +LI GL + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
             + A +I  E                  M   G   N  T N+L++G  +  KLE A+ 
Sbjct: 241 DCDMAQEIFKE------------------MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 282

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F+ + R    PT+ +YN +I G+CK  +  + +     +  KG KPD++ Y+ +I+G C
Sbjct: 283 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           +    + A  L  +  + G  P+   YN LI      G  E + +L   M+
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 203/398 (51%), Gaps = 19/398 (4%)

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           + + DRM     + D  TY   ++GLCK G+ + A  +  +M +  +    + YN +IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+   + +   L++ M  KG   NVV+Y+ LI  L   G+  +A  +   + E+  N D
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   LI+   K                  EG+L +A  L + M K     +  T +SL
Sbjct: 121 VFTFSALIDAFVK------------------EGKLVEAEKLYDEMVKRSIDPSIVTYSSL 162

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NGF    +L+ A  +F+ M  K C P VV+YNTLI G CK +R  E     +EM ++G 
Sbjct: 163 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
             + +TY++LI GL Q+   DMA ++  + +  G  P++  YN L+ GLC  GK+E A+ 
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 282

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           ++  +++    P + TYN +++G+ K G  +   +++ ++  + ++PD+++YN  + G C
Sbjct: 283 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 +A     +    G LP +  ++ L+RA + +G
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 210/412 (50%), Gaps = 20/412 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LC++   + A   LN + +  L+P V  Y T+I+GL K   +  AL +F EM 
Sbjct: 19  YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 78

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G+  NVV Y+ LI      G +  A  +   ++ E  + P+V T++ +I+   K G+ 
Sbjct: 79  TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKL 137

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E  +++D M K   +    TY S I+G C    ++ A++++  MV    F D VTYN +
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 283 IDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I GFC+  +++E  E++  M ++G + N V+YNILI+GL + G  D A  I++ +     
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  T+  L++GLCKNG L KA+ +   ++              ++M+        YT 
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-------------SKMEP-----TIYTY 299

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N ++ G  +A K+E+   LF  +S KG  P VV+YNT+I+G C+     EA +  KEM E
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            G  P+   Y+ LI    +    + + +L  +    GF  D +   ++ + L
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 192/359 (53%), Gaps = 21/359 (5%)

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENG 324
           MV  G   D VTY  +++G C+ G     F L   M  +G L   V+ YN +I GL +  
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYK 65

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            +D+A+++++ +  K    +  T+  LI+ LC  G                  R +DA+ 
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG------------------RWSDASR 107

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L++ M +     + +T ++L++ F++  KL  A  L+ EM ++   P++V+Y++LING C
Sbjct: 108 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 167

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
             +R  EA    + M+ K   PD++TY+ LI G C+ K+++  +++  +  Q+G   +  
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YNILI GL  AG  + A +++  M      PN++TYNTL+DGL K G  +KA+ ++ ++
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
              ++ P I +YNI ++G+C   ++ D ++   +   +G+ P  + ++ ++      G+
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 346



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 171/308 (55%), Gaps = 12/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I    K    D AL++F+ M E  G    +         LC   ++  A R L+ + E
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           + + PDV+++  +I+  VK G L+ A  ++DEM +R ++ ++V Y+ LI+GF        
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           AK+++E +V     +P+VVTYN +I G CK  R +E +E++  M +     ++ TY   I
Sbjct: 175 AKQMFEFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR-KGC 307
            GL +AG+ + A+ +++EMV  G+  + +TYN ++DG C+ GK+++   ++E + R K  
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             + +YNI+I G+ + GKV++   ++  L  K    D   +  +I+G C+ G   +A  +
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353

Query: 368 LNEVEEGG 375
             E++E G
Sbjct: 354 FKEMKEDG 361



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 178/365 (48%), Gaps = 53/365 (14%)

Query: 5   AKRLL-NLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A RLL ++++ + NP   T  AL D+  +E     +  L+  +++R IDP +V + S I 
Sbjct: 105 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI- 163

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                                                            C   + ++AK+
Sbjct: 164 ----------------------------------------------NGFCMHDRLDEAKQ 177

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               +  K   PDV +Y T+I G  K   +   + VF EM +RG+  N V YNILI G F
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + GD   A+EI++ +V +  V PN++TYN +++GLCK G+ ++ + +++ +++++ E   
Sbjct: 238 QAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           +TY   I G+CKAG VE    ++  +   G+  D V YN MI GFCR G  +E   L++ 
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G L N   YN LIR  L +G  + +  + + +R      D++T G++ N L  +G 
Sbjct: 357 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGR 415

Query: 361 LNKAI 365
           L+K+ 
Sbjct: 416 LDKSF 420


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 277/586 (47%), Gaps = 35/586 (5%)

Query: 6   KRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE 65
           + + +L+  + +   AL  F  A+  P + HS   +  ++++L        V ++L+ + 
Sbjct: 40  QHIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMP 99

Query: 66  IQKCYCP-EDVALSVIQAYGKNSM-PD--KALDVFQRMNE-----IFGCEAGILCRKRQF 116
                 P E++ L+VI+  G+  M P   K LD+  +  +     IF     +L  K   
Sbjct: 100 HAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLV-KVDI 158

Query: 117 EKAKRFL-NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           + A+ F    +   G++ D Y++  ++ GL  +  +     +   M  RGV+ N V YN 
Sbjct: 159 DVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNT 218

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+    K G   RA     R +M+    PN VT+NV+I   CK     + L + ++    
Sbjct: 219 LLHALCKNGKVGRA-----RSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSL 273

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
               D  T    +  LC AG V  A  +   +   G  VD V YN ++ GFCR GKIK  
Sbjct: 274 GFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
               + M RKGCL NV +YNILI G  ++G  D A+ ++  ++    + +  T+  LI G
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKG 393

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           L   G + + ++IL  +EE   G               G +++ Y  NS++ G  + +  
Sbjct: 394 LFFGGRIEEGLKILELMEESKGG--------------SGGRISPY--NSVLYGLYKKNMW 437

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+    +M +    P  V  +  I G C+      A     +M+ +G  P+++ Y  L
Sbjct: 438 DEALEFLMKMEK--LFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCL 495

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++G CQ   +  A +L  + +  G+    + +N LIHG C  GK E AL+L  +M  R C
Sbjct: 496 VHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGC 555

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           VP+  TY+ L+D L + G+  KAL I+N ++E+ + PD  ++N  L
Sbjct: 556 VPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 202/504 (40%), Gaps = 93/504 (18%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKN-EREKDSFTYCSFIHGLCKAG----------- 255
           TY  +I  LC   RFD   ++ D M        D   + + I GL +A            
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133

Query: 256 -----------------------NVEGAERVYR-EMVESGIFVDAVTYNAMIDGFCRAGK 291
                                  +++ A   YR +M+ SG+  D  T+  ++ G C   +
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNR 193

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           I + F L +VM  +G   N V YN L+  L +NGKV  A S+ + + E N      T  V
Sbjct: 194 IGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEPN----DVTFNV 249

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           LI   CK   L +A+ +L +    G                  GR+ +A  ++ R++  G
Sbjct: 250 LIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKG 309

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
             ++    N+L+ GF +  K++ A    KEM RKGC P V +YN LI+G C    F  A 
Sbjct: 310 GLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMAL 369

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL----------------------- 490
               +M   G   +  TY  LI GL    +I+  LK+                       
Sbjct: 370 DMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLY 429

Query: 491 ----------CCQFLQK--GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
                       +FL K     P     ++ I G C  G V++A  ++  M      PN+
Sbjct: 430 GLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNI 489

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           + Y+ L+ G  + G+  +A E+ N ++          +N  + G C   +   A + L+D
Sbjct: 490 LVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDD 549

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            + RG +P   T+  L+ A+   G
Sbjct: 550 MVGRGCVPDRGTYSPLIDALCRKG 573



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 94  DVFQRMNEIFG-----CEAGI------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           + F+ MNE+ G       +G        C + + E A + L+ +  +G  PD  +Y  +I
Sbjct: 507 EAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLI 566

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           + L + G+   AL++F++M E+G+  +   +N L+    K+  ++  K ++ 
Sbjct: 567 DALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWLENKNVFH 618


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 248/514 (48%), Gaps = 24/514 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           RK  F  A   L  + ++G   +VY+Y  ++ GL ++ +   A+++  EM +  +  +VV
Sbjct: 121 RKTGF--AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVV 178

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN +I GF +  +  +A ++   +      + ++VT+ ++I+  CK G+ DE + +   
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSGCSW-SLVTWGILIDAFCKAGKMDEAMGLLKE 237

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK    E D   Y S I G C  G ++  + ++ E++E G    A+TYN +I GFC+ G+
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGR 297

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +KE  E++E M  +G   NV +Y  LI GL   GK  EA+ +  L+ +K+   +  T+ +
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNI 357

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           +IN LCK+  +                  ADA  +V  M K   + +  T NSL+ G   
Sbjct: 358 IINKLCKDSLV------------------ADALEIVELMKKRRTRPDNITYNSLLGGLCA 399

Query: 411 ASKLENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              L+ A  L   M +      P V+S+N LI+GLCK  R  +A      ++EK    D+
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDI 459

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +T ++L+N   +S  ++ A++L  Q       P+   Y  +I G C  G +  A  L   
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+     P++  YN L+  L K G  D+A  ++  +  +   PD+IS+NI + G      
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  A   L      G+ P   T+  L+   +  G
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLG 613



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 21/483 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +F KA   L  + +  L PDV SY TVI G  +  +L  AL + +EM   G   +
Sbjct: 152 LCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWS 211

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V + ILID F K G    A  + + +     +  +++ Y  +I G C CG  D    ++
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGLLKEM-KHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D + +      + TY + I G CK G ++ A  ++  M+E G+  +  TY  +IDG C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE  +L  +M +K    NVV+YNI+I  L ++  V +A+ I EL++++    D+ T+
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITY 390

Query: 349 GVLINGLCKNGYLNKAIQIL-----------------NEVEEG--GEGRLADAASLVNRM 389
             L+ GLC  G L++A ++L                 N +  G     RL  A  + + +
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            +     +  T N L+N  +++  +  A+ L+K++S     P   +Y T+I+G CK    
Sbjct: 451 VEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGML 510

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A   + +M      P +  Y+ L++ LC+   +D A +L  +  +    PDV  +NI+
Sbjct: 511 NVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIM 570

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G   AG ++ A  L   M      P+L TY+ L++   K G  D+A+  ++ +++   
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGF 630

Query: 570 RPD 572
            PD
Sbjct: 631 EPD 633



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 219/405 (54%), Gaps = 26/405 (6%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           SF   + +  L ++ N E A   YR+M+E+  F++ V+ + +++ F +  K      +  
Sbjct: 72  SFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLA 131

Query: 301 VMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M ++G   NV +YNIL++GL  N +  +A+S+   +R+ +   D  ++  +I G C+  
Sbjct: 132 LMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGK 191

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            L KA+Q+ NE++  G                  G++ +A  L+  M   G + +     
Sbjct: 192 ELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYT 251

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+ GF    +L+    LF E+  +G SP  ++YNTLI G CK+ R  EA    + M+E+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G +P++ TY+ LI+GLC   K   AL+L    LQK   P+V  YNI+I+ LC    V DA
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER--LRPDIISYNITL 580
           L++   MKKR   P+ +TYN+L+ GL   GD D+A ++   +L++     PD+IS+N  +
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431

Query: 581 KGLCSCSRMS---DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC  +R+    D ++ L + L  G + TT   +IL+ + + +G
Sbjct: 432 HGLCKGNRLHQALDIYDLLVEKLGAGDIVTT---NILLNSTLKSG 473



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 238/480 (49%), Gaps = 32/480 (6%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEK 129
           +I A+ K    D+A+ + + M    G EA ++         C   + ++ K   + + E+
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHK-GLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  P   +Y T+I G  K G L  A  +F+ M ERGV  NV  Y  LIDG    G    A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            ++   L+++    PNVVTYN++IN LCK     + LE+ + MKK     D+ TY S + 
Sbjct: 337 LQLLN-LMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLG 395

Query: 250 GLCKAGNVEGAERVYREMVESGIFVD--AVTYNAMIDGFCRAGKIKECFELWEVMGRK-G 306
           GLC  G+++ A ++   M++   + D   +++NA+I G C+  ++ +  ++++++  K G
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLG 455

Query: 307 CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++V+ NIL+   L++G V++A+ +W+ +       +S T+  +I+G CK G LN A  
Sbjct: 456 AGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKG 515

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +L ++      RL++    V            +  N L++   +   L+ A  LF+EM R
Sbjct: 516 LLCKM------RLSELPPSV------------FDYNCLLSSLCKKGTLDQAWRLFEEMQR 557

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
               P V+S+N +I+G  K      A S +  M   G  PD+ TYS LIN   +   +D 
Sbjct: 558 DDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDE 617

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+    + +  GF PD  + + ++    S G+ +   +    +  ++ V +     T+MD
Sbjct: 618 AISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMD 677


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 224/461 (48%), Gaps = 56/461 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  R+ ++A   L S+   G++ DV +YGT+I GL  + +L GAL +  EM   GV  N
Sbjct: 125 LCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPN 184

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWE---RLVMETSVY----------------------- 203
           V+ Y+ L+ G+ + G +    +++E   RL +E  V                        
Sbjct: 185 VIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKD 244

Query: 204 --------PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                   PNVVTYNV+IN LCK G   E L + + M       D  TY + I GL    
Sbjct: 245 IMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVL 304

Query: 256 NVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            ++GA  +  EM++    V  D VT+N++I G C+ G++++   + E+M  +GC+ N+V+
Sbjct: 305 EMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVT 364

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN LI G L   KV+ A+++   L       DS T+ +LING  K          L EV+
Sbjct: 365 YNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSK----------LWEVD 414

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                    A   +  M + G +   +    L+    Q   +E A+ LF EM    C   
Sbjct: 415 R--------AEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLD 465

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y+T++ G CK      A   +++ML++G  PD +TYS+LIN   +   ++ A ++  
Sbjct: 466 AVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLK 525

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           Q    GF PDV +++ LI G  + G++   L L   M+ +N
Sbjct: 526 QMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKN 566



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 240/477 (50%), Gaps = 24/477 (5%)

Query: 169 NVVCYNILIDGFFKKG-DYMRAKEIWERLVMET--SVYPNVVTYNVMINGLCKCGRFDEC 225
           + V YNI++    ++G D  +A  +   +  E   +  PN V+Y +++ GLC   R DE 
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           + +   M+ +    D  TY + I GLC A  ++GA  +  EM  SG+  + + Y+ ++ G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           +CR+G+ ++  +++E M R G   +V+ +   I  L + G++ +A+ + +++ ++    +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEG-------RLADAASLVNRMDK------ 391
             T+ VLIN LCK G + +A+ + NE+++ G          L    S V  MD       
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 392 ---HGCKL---NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
               G  L   +  T NS+++G  +  ++  AI + + M+ +GC   +V+YN LI G  +
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM 505
           V +   A + + E++  G +PD  TYS+LING  +  ++D A        Q+G   ++  
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHIL 565
           Y  L+  LC  G +E A+ L++ M   NC  + V Y+T+M G  K+GD   A ++   +L
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDM-NCGLDAVAYSTMMYGACKSGDIKAAKQLLQDML 493

Query: 566 EERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +E L PD ++Y+I +        + +A   L      G +P    +  L++     G
Sbjct: 494 DEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEG 550



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 231/471 (49%), Gaps = 25/471 (5%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +P+  SY  V+ GL  S     A+A+   M   GV  +VV Y  LI G     +   A E
Sbjct: 112 RPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALE 171

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +   +   + V+PNV+ Y+ ++ G C+ GR+ +  ++++ M +   E D   +  FI  L
Sbjct: 172 LLGEMC-GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDL 230

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NV 310
           CK G +  A +V   MV+ G+  + VTYN +I+  C+ G ++E   L   M  KG   +V
Sbjct: 231 CKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDV 290

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKN--CNADSTTHGVLINGLCKNGYLNKAIQIL 368
           V+YN LI GL    ++D A+ + E + + +     D  T   +I+GLCK G + +AI   
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAI--- 347

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                          S+   M + GC  N  T N L+ GF++  K+  A+ L  E+   G
Sbjct: 348 ---------------SVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSG 392

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P   +Y+ LING  K+     A  F++ M ++G + ++  Y  L+  LCQ   ++ A+
Sbjct: 393 LEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAM 452

Query: 489 KLCCQF-LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            L  +  +  G   D   Y+ +++G C +G ++ A QL  +M      P+ VTY+ L++ 
Sbjct: 453 VLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINM 510

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
             K GD ++A  +   +      PD+  ++  +KG  +  +++   + +++
Sbjct: 511 FAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 189/404 (46%), Gaps = 23/404 (5%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           ++ C     CR  +++   +    +   G++PDV  +   I+ L K G +  A+ V D M
Sbjct: 187 VYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIM 246

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            +RG+E NVV YN+LI+   K+G    A  +   +  +  V P+VVTYN +I GL     
Sbjct: 247 VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD-DKGVAPDVVTYNTLIAGLSGVLE 305

Query: 222 FDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            D  + + + M + +   E D  T+ S IHGLCK G +  A  V   M E G   + VTY
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N +I GF R  K+     L   +   G   +  +Y+ILI G  +  +VD A      + +
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +   A+   +  L+  LC+ G + +A+ + NE++                     C L+A
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-------------------MNCGLDA 466

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              +++M G  ++  ++ A  L ++M  +G +P  V+Y+ LIN   K+    EA   +K+
Sbjct: 467 VAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQ 526

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           M   G+ PD+  +  LI G     +I+  L L  +   K    D
Sbjct: 527 MAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 28/329 (8%)

Query: 292 IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++       V+ R+G  +  +   L+   L    V EA S+   L +     D+ ++ ++
Sbjct: 29  VRPAAPFLAVLLRRGRADAAA---LLNRRLRAAPVTEACSLLSALPDVR---DAVSYNIV 82

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG---CKLNAYTCNSLMNGF 408
           +  LC+ G                 G L  A SL+  M +      + NA +   +M G 
Sbjct: 83  LAALCRRG-----------------GDLRQALSLLADMSREAHPAARPNAVSYTMVMRGL 125

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             + + + A+ L + M   G    VV+Y TLI GLC       A   + EM   G  P++
Sbjct: 126 CASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNV 185

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I YS L+ G C+S +     K+  +  + G  PDV M+   I  LC  G++  A+++   
Sbjct: 186 IVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI 245

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +R   PN+VTYN L++ L K G   +AL + N + ++ + PD+++YN  + GL     
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE 305

Query: 589 MSDAFEFLNDALCRGIL--PTTITWHILV 615
           M  A   L + +    L  P  +T++ ++
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVI 334



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 17/230 (7%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTV---VSYNTLINGLCKVERFG---EAYSFV 456
           +L+N  ++A+ +  A  L   +      P V   VSYN ++  LC+  R G   +A S +
Sbjct: 49  ALLNRRLRAAPVTEACSLLSAL------PDVRDAVSYNIVLAALCR--RGGDLRQALSLL 100

Query: 457 KEM---LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            +M        +P+ ++Y++++ GLC S++ D A+ L       G   DV  Y  LI GL
Sbjct: 101 ADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGL 160

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C A +++ AL+L   M      PN++ Y+ L+ G  ++G      +++  +    + PD+
Sbjct: 161 CDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDV 220

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I +   +  LC   R+  A +  +  + RG+ P  +T+++L+  +   G+
Sbjct: 221 IMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGS 270


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 268/570 (47%), Gaps = 32/570 (5%)

Query: 78   SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
            ++I  + ++    +A+ V+  MN      + F C   +  LCR  +  +A++FL  +   
Sbjct: 518  TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 577

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            GL P+  +Y  +ING    GD L A + FD+M + G   +   Y  L+ G  K G+ + A
Sbjct: 578  GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 637

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            K+   RL        +V+ YN ++   CK G   E + ++D+M +N    DS+TY S + 
Sbjct: 638  KKFLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 696

Query: 250  GLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            GLC+ G    A  ++   +  G +F + V Y  ++DG  +AG  K  F  +E M +KG C
Sbjct: 697  GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756

Query: 308  LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             + V++N +I      G++ +A   +  +R      +  T+ +L++G  K   L + + +
Sbjct: 757  PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816

Query: 368  LNEVEEGGEGRLAD-------------------AASLVNRMDKHGCKLNAYTCNSLMNGF 408
             + +    EG   D                      L+ +M   G   + +T N L+N +
Sbjct: 817  YSTMMR--EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 874

Query: 409  IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             ++ K+  A  L   M+  G  P   +YN + NGL K   F E+   + EMLE G  P  
Sbjct: 875  SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 934

Query: 469  ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
              Y  LING+C+   I  A KL  +    GF       + ++ GL   GK EDA+ +  +
Sbjct: 935  AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 994

Query: 529  MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
            M +   +P + T+ TLM    +     +AL++   +    L+ D+++YN+ + G+C+   
Sbjct: 995  MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1054

Query: 589  MSDAFEFLNDALCRGILPTTITWHILVRAV 618
             + AFE   +   R + P   T+ +LV A+
Sbjct: 1055 SAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 260/556 (46%), Gaps = 28/556 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMN------EIFGCEA--GILCRKRQFEKAKRFLNSLWEKG 130
           +I+ Y K  M D A++ F+ +        ++ C      + + ++ E        + +KG
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+V ++  +INGL   G+L  A  +  +M E G    +V YN L++ + KKG Y  A 
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E+ + ++ +  +  +V TYNV I+ LC   R  +   +  +M+K     +  TY + I+G
Sbjct: 289 ELIDYMICK-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
             K G +  A +V+ EM +  +  + VTYNA+I G C  G  +E   L + M   G  LN
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+Y  L+ GL ++ K + A  + E +R  +       + VLI+GLCKNG L++A+Q   
Sbjct: 408 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ--- 464

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                          LV  M K G   +  T +SL+NGF +   +++A  +   M R G 
Sbjct: 465 ---------------LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
               + Y+TLI   C+     EA      M   G   D  T ++L++ LC+  K+  A K
Sbjct: 510 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 569

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
             C   + G  P+   Y+ +I+G  S G   +A   + +M K    P+  TY +L+ GL 
Sbjct: 570 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G+  +A +  N +       D + YN  L   C    + +A    +  +   +LP + 
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689

Query: 610 TWHILVRAVMNNGAST 625
           T+  L+  +   G + 
Sbjct: 690 TYSSLLTGLCRKGKAV 705



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 254/547 (46%), Gaps = 42/547 (7%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
            + +  ++   A IL + R ++ AK  L  L + G+                     G+ 
Sbjct: 108 LKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGI---------------------GSK 146

Query: 156 AVFDEMFERGVETNVV--CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           ++F  + +     N +   +++LI  + K+G    A E +E LV      P+V T N+++
Sbjct: 147 SIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE-LVGLVGFKPSVYTCNMIL 205

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
             + K  R +    ++  M       +  T+   I+GLC  GN++ A  + ++M E+G  
Sbjct: 206 ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV 265

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
              VTYN +++ +C+ G+ K   EL + M  KG   +V +YN+ I  L  N +  +A  +
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE--------------GGE-- 376
            + +R++  + +  T+  LING  K G +  A Q+ NE+ +              GG   
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 377 -GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            G   +A  L++ M+  G +LN  T  +L+NG  +  K E A  L + M         ++
Sbjct: 386 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 445

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LI+GLCK     EA   V  M + G  PD+ITYS LING C+   I  A ++ C+  
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 505

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G   +  +Y+ LI+  C  G V +A+++Y+ M       +  T N L+  L + G   
Sbjct: 506 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A +   H+    L P+ I+Y+  + G  S     +AF F +D +  G  P+  T+  L+
Sbjct: 566 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 625

Query: 616 RAVMNNG 622
           + +   G
Sbjct: 626 KGLCKGG 632



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 265/586 (45%), Gaps = 64/586 (10%)

Query: 98  RMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           R+NE+ +G     LC+  +FE AKR L  +    +     +Y  +I+GL K+G L  A+ 
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +   M++ GV  +V+ Y+ LI+GF + G+   AKEI  R+   + +  N + Y+ +I   
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY-RSGLVLNKIIYSTLIYNF 523

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C+ G   E ++++  M  N    D FT    +  LC+ G +  AE+    M   G+  ++
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 583

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWEL 335
           +TY+ +I+G+   G     F  ++ M + G   +  +Y  L++GL + G + EA      
Sbjct: 584 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 643

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA---ASLVNRMDKH 392
           L       DS  +  L+   CK+G L++A+ + +++ +     L D+   +SL+  + + 
Sbjct: 644 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ--NNVLPDSYTYSSLLTGLCRK 701

Query: 393 GCKLNA-------------------YTCNSLMNGFIQASKLENAIFLFKEMSRKG----- 428
           G  + A                   YTC  L++G  +A   + A + F+EM +KG     
Sbjct: 702 GKAVTAVCLFGTAMGRGTLFPNHVMYTC--LVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 759

Query: 429 ---------CS---------------------PTVVSYNTLINGLCKVERFGEAYSFVKE 458
                    CS                     P + +YN L++G  K +      S    
Sbjct: 760 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 819

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M+ +G  PD +T+  LI GL +S   D+ +KL  + + +G   D   +NILI+    +GK
Sbjct: 820 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 879

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
           +  A  L + M      P+  TYN + +GL K     ++  + + +LE  + P    Y  
Sbjct: 880 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 939

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            + G+C    +  AF+  ++    G     +    +VR +++ G +
Sbjct: 940 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 985



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 34/416 (8%)

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV----------------TYNAMIDGFC 287
           YC   H L KA   + A+ + R + + GI   ++                 ++ +I  + 
Sbjct: 115 YCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYL 174

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G I    E +E++G  G   +V + N+++  ++++ + +   S++  + +K    +  
Sbjct: 175 KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 234

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T  +LINGLC  G L KA  +L ++EE G                 +GR   A  L++ M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G + +  T N  ++      +   A  L K+M ++  SP  V+YNTLING  K  + 
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 354

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           G A     EM +    P+ +TY+ LI G C     + AL+L       G   +   Y  L
Sbjct: 355 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 414

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           ++GLC   K E A +L   M+  + V   + Y  L+DGL K G  D+A+++  ++ ++ +
Sbjct: 415 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 474

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            PD+I+Y+  + G C    +  A E +      G++   I +  L+     +G  T
Sbjct: 475 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVT 530



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 9/239 (3%)

Query: 79   VIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
            +I  Y ++    KA D+   MN        + +      L +K  F ++   L+ + E G
Sbjct: 870  LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 929

Query: 131  LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            + P    Y T+ING+ + GD+ GA  + DEM   G  ++ V  + ++ G    G    A 
Sbjct: 930  VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM 989

Query: 191  EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
             + + + +   + P + T+  +++  C+  +  E L++   M+    + D   Y   I G
Sbjct: 990  LVLDHM-LRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1048

Query: 251  LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
            +C  G+   A  +Y EM    +  +  TY  ++D    A  + +  +L   +  +G ++
Sbjct: 1049 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1107


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 181/650 (27%), Positives = 295/650 (45%), Gaps = 94/650 (14%)

Query: 4   SAKRLLNLLKAEK-NPHTALALF---DSATREPG-----------YAHS------PHLFH 42
           SA  LL LL+    +P  AL LF    SA   P             AH       P L  
Sbjct: 6   SAANLLALLRRNAASPAVALRLFLHLSSAASLPPPRCTSFLARLVAAHPAAGALLPRLHR 65

Query: 43  HILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY-GKNSMPDKALDVFQRMNE 101
           HIL    DP    H+  +L   +I     P  +A+   ++     S P     V+ R+  
Sbjct: 66  HILS-FPDP--CPHLLALLSCSDI----LPLRLAIPAFRSLRALASAPPPPTPVYNRL-- 116

Query: 102 IFGCEAGILC--RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
                  IL   R+ + +  +     L   G +PDV++   ++  L  +G +  A  VF+
Sbjct: 117 -------ILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFE 169

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M  R    N   + IL  G+ + G  + A +     V++     N+V  N ++ G CK 
Sbjct: 170 AMPVR----NEFSFGILARGYCRAGRSVDALK-----VLDGMPSMNLVVCNTVVAGFCKE 220

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES---GIF-VD 275
           G  +E   + +RM+      +  T+ S I  LCKAG V  A R++++M E    G+   D
Sbjct: 221 GLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPD 280

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVV-SYNILIRGLLENGKVDEAISIWE 334
            VT++ M+ GFC AG + E   L ++M   G L  V SYN  + GL+ NG+V EA  +  
Sbjct: 281 QVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLR 340

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-----------------GEG 377
            +  +  + +S T+ ++++GLCK G    A ++ N +  G                  +G
Sbjct: 341 EMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKG 400

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
            +A A  +++ M + GC  N++T N L+    +A +   A  L + MS KG S      N
Sbjct: 401 NIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCN 460

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWK-----------------------PDMITYSLL 474
            +I+GLC+  +   A   V  M E+G                         PD ITYS+L
Sbjct: 461 IIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSIL 520

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+ LC+  + D A K   + + K  +PD  +Y+  IHG C  GK   A+++  +M+K+ C
Sbjct: 521 ISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGC 580

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
            P+  TYN L+ G  +    D+ +++ + + E+ + P++++YN  +K  C
Sbjct: 581 NPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFC 630



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 236/489 (48%), Gaps = 56/489 (11%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + E A+R   ++  +    + +S+G +  G  ++G  + AL V D M       N
Sbjct: 155 LCDAGRMELAQRVFEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGM----PSMN 206

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V  N ++ GF K+G    A+ + ER+ ++  + PNVVT+N  I+ LCK GR  +   ++
Sbjct: 207 LVVCNTVVAGFCKEGLVEEAERLVERMRVQ-GLAPNVVTFNSRISALCKAGRVLDAYRIF 265

Query: 230 DRMKKNERE----KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMID 284
             M+++ +      D  T+   + G C AG V+ A RV  +++  G F+  V +YN  + 
Sbjct: 266 KDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEA-RVLVDIMRCGGFLRRVESYNRWLS 324

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G  R G++ E  EL   M  +    N  +YNI++ GL + GK  +A  +   +R    + 
Sbjct: 325 GLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSP 384

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLV 386
           D  T+  L++  C  G +  A +IL+E+ + G                  GR  +A  L+
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG------------------ 428
            RM + G  L+   CN +++G  + SKL+ A+ +   M  +G                  
Sbjct: 445 ERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDS 504

Query: 429 -----CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
                C P  ++Y+ LI+ LCK  RF EA   + EM+ K   PD + Y   I+G C+  K
Sbjct: 505 SISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGK 564

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
             +A+K+     +KG  P    YN+LI G     K ++ ++L S M+++   PN++TYN+
Sbjct: 565 TSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNS 624

Query: 544 LMDGLFKTG 552
           L+    + G
Sbjct: 625 LIKSFCQQG 633



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 48/451 (10%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            + ++  P    YN +I    +  R D    ++  +     + D FT    +  LC AG 
Sbjct: 101 ALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGR 160

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           +E A+RV+  M     F    ++  +  G+CRAG+  +  ++ + M     +N+V  N +
Sbjct: 161 MELAQRVFEAMPVRNEF----SFGILARGYCRAGRSVDALKVLDGMP---SMNLVVCNTV 213

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           + G  + G V+EA  + E +R +    +  T    I+ LCK G +  A +I  +++E  +
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQ 273

Query: 377 GRLADAASLVNRMDKHGC-KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                          HG  + +  T + +++GF  A  ++ A  L   M   G    V S
Sbjct: 274 ---------------HGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVES 318

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN  ++GL +  R GEA+  ++EM  +   P+  TY+++++GLC+  K   A ++   F+
Sbjct: 319 YNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVE-NFI 377

Query: 496 QKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           + G  +PDV  Y  L+H  CS G +  A ++   M ++ C PN  TYN L+  L++ G  
Sbjct: 378 RSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRT 437

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF-------------------EF 595
            +A  +   + E+    D    NI + GLC  S++  A                     F
Sbjct: 438 TEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSF 497

Query: 596 L----NDALCRGILPTTITWHILVRAVMNNG 622
           L    + ++ +  LP  IT+ IL+ A+   G
Sbjct: 498 LSVVSDSSISQRCLPDRITYSILISALCKEG 528



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 157/331 (47%), Gaps = 23/331 (6%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN------KAIQ 366
           YN LI   L   ++D   ++++ L       D  T  +L+  LC  G +       +A+ 
Sbjct: 113 YNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMP 172

Query: 367 ILNEVEEG-------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           + NE   G         GR  DA  +++ M      +N   CN+++ GF +   +E A  
Sbjct: 173 VRNEFSFGILARGYCRAGRSVDALKVLDGMPS----MNLVVCNTVVAGFCKEGLVEEAER 228

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-----KPDMITYSLL 474
           L + M  +G +P VV++N+ I+ LCK  R  +AY   K+M E  W     +PD +T+ ++
Sbjct: 229 LVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED-WQHGLPRPDQVTFDVM 287

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++G C +  +D A  L       GF   V  YN  + GL   G+V +A +L   M     
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERI 347

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            PN  TYN ++ GL K G    A  + N I    + PD+++Y   L   CS   ++ A  
Sbjct: 348 HPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANR 407

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNGAST 625
            L++   +G  P + T+++L++++   G +T
Sbjct: 408 ILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 25/278 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ +   A+R  N +    + PDV +Y ++++     G++  A  + DEM ++G   N
Sbjct: 361 LCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPN 420

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              YN+L+   ++ G    A+ + ER+  E     +    N++I+GLC+  + D  + + 
Sbjct: 421 SFTYNVLLQSLWRAGRTTEAERLLERMS-EKGYSLDTAGCNIIIDGLCRNSKLDVAMGIV 479

Query: 230 DRMKKNERE-----------------------KDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           D M +                            D  TY   I  LCK G  + A++   E
Sbjct: 480 DGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLE 539

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGK 325
           M+   I  D+V Y+  I G+C+ GK     ++   M +KGC  +  +YN+LIRG  E  K
Sbjct: 540 MIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHK 599

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            DE + +   + EK  + +  T+  LI   C+ G L +
Sbjct: 600 SDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 248/497 (49%), Gaps = 21/497 (4%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K + PD+ ++G +I+    +G L    A   ++ + G+    V +  L+     +     
Sbjct: 138 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSD 197

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCS 246
           A  I  R + E    P+V +Y  ++ GLC   + +E  E+   M ++      +  +Y +
Sbjct: 198 AMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTT 257

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            IHG  K G+V  A  ++ +M++ GI  + VT N++IDG C+   + +   + + M  + 
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            + N  +YN LI G L +G+  EA+ I + +       +  T+ +LI+ LCK+G   +A 
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           +I N + + G+                  K NA T  SL++G+     L +   +   M 
Sbjct: 378 EIFNSMIQSGQ------------------KPNASTYGSLLHGYATEGNLVDMNNVKDLMV 419

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           + G  P    +N  I   CK  R  EA     +M ++G+ PD++ Y+ +I+GLC+  ++D
Sbjct: 420 QNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLD 479

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A+   CQ +  G +PD+  +N LIHG    GK E A +L+  M  R   PN+ T+N+++
Sbjct: 480 DAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMI 539

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           D LFK G   +A ++++ +     +P+++SYN  + G      + +  + L+D L  G+ 
Sbjct: 540 DKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLK 599

Query: 606 PTTITWHILVRAVMNNG 622
           PT +T++ L+  +++ G
Sbjct: 600 PTAVTFNTLLDGMVSMG 616



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 232/495 (46%), Gaps = 35/495 (7%)

Query: 147 KSGDL--LGALAVFDEMFERGVETNVVCYNIL--------IDGFFKKGDYMRAKEIWERL 196
           +SGDL    AL +FDE+ +R    ++   N L        +    + G  + A  ++ R+
Sbjct: 74  RSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPAL-AVSMFNRM 132

Query: 197 VMETS--VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
               +  V P++ T+ ++I+  C  G  +       ++ K      + T+   +  LC  
Sbjct: 133 ARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAE 192

Query: 255 GNVEGAER-VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNV 310
                A   V R M E G   D  +Y  ++ G C   K +E  EL  +M   G     NV
Sbjct: 193 KRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV 252

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           VSY  +I G  + G V +A +++  + +     +  T   +I+GLCK   ++KA  +L +
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           +                 +D+H    N  T NSL++G++ + +   A+ + KEMSR G  
Sbjct: 313 M-----------------IDEH-IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 354

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P VV+Y+ LI+ LCK     EA      M++ G KP+  TY  L++G      +     +
Sbjct: 355 PNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNV 414

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
               +Q G  P   ++NI I+  C  G++++A   ++ M+++  +P++V Y T++DGL K
Sbjct: 415 KDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCK 474

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D A+  +  ++++ L PDII++N  + G     +   A E   + + RGI P   T
Sbjct: 475 IGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNT 534

Query: 611 WHILVRAVMNNGAST 625
           ++ ++  +   G  T
Sbjct: 535 FNSMIDKLFKEGKVT 549



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 234/525 (44%), Gaps = 85/525 (16%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHH--ILRRLIDPKLVVHVSR 59
            ++   LL  L AEK    A+ +     R P    +P +F +  +L+ L   K     + 
Sbjct: 179 AVTFTPLLRTLCAEKRTSDAMNIV--LRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAE 236

Query: 60  ILELIEIQKCYCPEDVA--LSVIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI-- 109
           ++ ++      CP +V    +VI  + K     KA  +F +M        +  C + I  
Sbjct: 237 LIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDG 296

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +  +KA+  L  + ++ + P+  +Y ++I+G + SG    A+ +  EM   G   N
Sbjct: 297 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 356

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING-------------- 215
           VV Y++LID   K G +  A+EI+  ++ ++   PN  TY  +++G              
Sbjct: 357 VVTYSMLIDCLCKSGLHAEAREIFNSMI-QSGQKPNASTYGSLLHGYATEGNLVDMNNVK 415

Query: 216 ---------------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                                 CKCGR DE    +++M++     D   Y + I GLCK 
Sbjct: 416 DLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKI 475

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSY 313
           G ++ A   + +M++ G+  D +T+N +I GF   GK ++  EL +E+M R    NV ++
Sbjct: 476 GRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTF 535

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I  L + GKV EA  +++L+       +  ++  +I+G    G + + +++L++   
Sbjct: 536 NSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD--- 592

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                          M   G K  A T N+L++G +                  G  P V
Sbjct: 593 ---------------MLLIGLKPTAVTFNTLLDGMVSM----------------GLKPDV 621

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           V+  TLI+  C+  R  +  +  +EML K  K D IT ++ + G+
Sbjct: 622 VTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 249/529 (47%), Gaps = 58/529 (10%)

Query: 150 DLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           ++L  +  FDE+ E  G   N  CY+ L+    K      A   + R+  +  V   ++ 
Sbjct: 139 EMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVV-GMID 197

Query: 209 YNVMINGLCKCGRFDECLEMW-DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           Y  ++N LCK G + E  EM+  ++ K     DS    S + G C+  N+  A +V+  M
Sbjct: 198 YRTIVNALCKNG-YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM 256

Query: 268 V-ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGK 325
             E     ++V+Y+ +I G C  G+++E F L + MG KGC  +  +Y +LI+ L + G 
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA---------------IQILNE 370
           +D+A ++++ +  + C  +  T+ VLI+GLC++G + +A               +   N 
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376

Query: 371 VEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +  G   +GR+  A  L+  M+K  CK N  T N LM G  +  K   A+ L K M   G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            SP +VSYN LI+GLC+      AY  +  M     +PD +T++ +IN  C+  K D+A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA-------------------------- 522
                 L+KG + D      LI G+C  GK  DA                          
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556

Query: 523 ---------LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
                    L +   + K   VP++VTY TL+DGL ++GD   +  I   +      P++
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             Y I + GLC   R+ +A + L+     G+ P  +T+ ++V+  +NNG
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 253/493 (51%), Gaps = 20/493 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVET 168
           LC+    E A+ F++ + + G   D +   +++ G  +  +L  AL VFD M  E     
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N V Y+ILI G  + G    A  + +++  E    P+  TY V+I  LC  G  D+   +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +D M     + +  TY   I GLC+ G +E A  V R+MV+  IF   +TYNA+I+G+C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G++   FEL  VM ++ C  NV ++N L+ GL   GK  +A+ + + + +   + D  +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 348 HGVLINGLCKNGYLNKAIQILN-----EVEEG------------GEGRLADAASLVNRMD 390
           + VLI+GLC+ G++N A ++L+     ++E               +G+   A++ +  M 
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G  L+  T  +L++G  +  K  +A+F+ + + +     T  S N +++ L K  +  
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           E  + + ++ + G  P ++TY+ L++GL +S  I  + ++       G  P+V  Y I+I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +GLC  G+VE+A +L S M+     PN VTY  ++ G    G  D+ALE    ++E    
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683

Query: 571 PDIISYNITLKGL 583
            +   Y+  L+G 
Sbjct: 684 LNDRIYSSLLQGF 696



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 270/579 (46%), Gaps = 53/579 (9%)

Query: 92  ALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           AL VF  M++   C             LC   + E+A    + + EKG +P   +Y  +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
             L   G +  A  +FDEM  RG + NV  Y +LIDG  + G    A  +  ++V +  +
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-RI 367

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
           +P+V+TYN +ING CK GR     E+   M+K   + +  T+   + GLC+ G    A  
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV----VSYNILIR 318
           + + M+++G+  D V+YN +IDG CR G +   ++L   M    C ++    +++  +I 
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN---CFDIEPDCLTFTAIIN 484

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
              + GK D A +   L+  K  + D  T   LI+G+CK G    A+ IL  + +     
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 379 LADAASLVNRMDKHGCKL-----------------NAYTCNSLMNGFIQASKLENAIFLF 421
              + +++  M   GCK+                 +  T  +L++G I++  +  +  + 
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           + M   GC P V  Y  +INGLC+  R  EA   +  M + G  P+ +TY++++ G   +
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ--LYSNMKKR----NCV 535
            K+D AL+     +++G+  +  +Y+ L+ G   + K  D  +    S++  R     C+
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724

Query: 536 PNLVTYNTLMDG------------LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             L++    + G            L K G  D++ ++  ++LE  +  +  + +I ++  
Sbjct: 725 NELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESY 783

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           CS  + +   E +   L  G +P+  ++ ++++ +   G
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEG 822



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 179/396 (45%), Gaps = 51/396 (12%)

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + RM+ +        Y + ++ LCK G  E AE    ++++ G  +D+    +++ GFCR
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +++  ++++VM +                                 E  C  +S ++
Sbjct: 243 GLNLRDALKVFDVMSK---------------------------------EVTCAPNSVSY 269

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+GLC+                   GRL +A  L ++M + GC+ +  T   L+   
Sbjct: 270 SILIHGLCE------------------VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                ++ A  LF EM  +GC P V +Y  LI+GLC+  +  EA    ++M++    P +
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           ITY+ LING C+  ++  A +L     ++   P+V  +N L+ GLC  GK   A+ L   
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M      P++V+YN L+DGL + G  + A ++ + +    + PD +++   +   C   +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
              A  FL   L +GI    +T   L+  V   G +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 234/492 (47%), Gaps = 23/492 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R R     + F + +  + L+    +Y T+IN    +GDL  +      +   G   +
Sbjct: 51  LARHRMLADMESFASRMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPD 106

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y   + G+ + G    A  ++  + +   V     TY  +++GLC  G   E + ++
Sbjct: 107 SHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVR-TAFTYTALLHGLCGAGMVREAMSVF 165

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+ +    D   Y + +HGLC AG    AE +  + +  G   + V YNA+IDG+C  
Sbjct: 166 AGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNV 225

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G ++   +++E M   GC  NV +Y  LI G  ++ K+D A+ ++  + +     +  T+
Sbjct: 226 GDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTY 285

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G C +G L+ A ++L  +E  G                   R+ +A  L+  + +
Sbjct: 286 TALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQ 345

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K+N     SL++G  +A +   A  L + +  +G  P   +Y++LI+GLC+ +   E
Sbjct: 346 KGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSE 405

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + +M+EKG +P  +TY+++I+ L +    D + K+  + +  G  PDV  Y I + 
Sbjct: 406 AMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVR 465

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++EDA  +  +M      PNLVTYN L+ G    G   +A   + H++    +P
Sbjct: 466 SYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525

Query: 572 DIISYNITLKGL 583
           +  SY + L+ L
Sbjct: 526 NEESYTVLLRLL 537



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 221/472 (46%), Gaps = 20/472 (4%)

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           LA  +    R    N+  Y  LI+ +   GD   +K     L +     P+   Y   + 
Sbjct: 57  LADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSL-LRAGFAPDSHAYTSFVV 115

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           G C+ G       ++  M      + +FTY + +HGLC AG V  A  V+  M   G   
Sbjct: 116 GYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAP 175

Query: 275 DAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           D   Y  M+ G C AG+ +E   L  + M      NVV YN LI G    G ++ A+ ++
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           E +    C+ +  T+  LI+G CK+  L++A+                   L +RM   G
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMM------------------LFSRMVDAG 277

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              N  T  +L+ G     +L+ A  L + M   G  P   + + LI+ LCK ER GEA 
Sbjct: 278 LVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQ 337

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             +  +++KG K + I Y+ LI+GLC++ +   A +L    + +GF PD   Y+ LI GL
Sbjct: 338 LLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C   ++ +A+ +  +M ++   P+ VTY  ++D L +    D + +I + ++   ++PD+
Sbjct: 398 CRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDV 457

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            +Y I ++  C   RM DA   +   +  G+ P  +T++ L+    N G ++
Sbjct: 458 FTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 259/599 (43%), Gaps = 43/599 (7%)

Query: 27  SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKN 86
           S+    G+A   H +   +       L+ H  R+  L+ ++ C        +++      
Sbjct: 96  SSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGA 155

Query: 87  SMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
            M  +A+ VF  M          ++      LC   +  +A+  L+    +G +P+V  Y
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +I+G    GDL  A+ VF+ M   G   NV  Y  LI GF K     RA  ++ R+V 
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV- 274

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  + PNVVTY  +I G C  G+ D    +   M+ +    + +T    I  LCK   V 
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A+ +   +++ GI V+ + Y ++IDG C+AG+      L + +  +G + +  +Y+ LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            GL    ++ EA+ + + + EK       T+ ++I+ L +    + + +IL+++   G  
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EGR+ DA  ++  M  HG   N  T N+L+ G+        A   
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVE-------------RFGEA---YSFVKEMLEKGW 464
           FK M   GC P   SY  L+  L K E             +  E    +  ++EM++   
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQL 574

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
             ++  Y+  +  LC+  ++D A  L  +      TP   +Y  +I   C    + +AL 
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
              +M K   +P L +Y  ++  L + G    A +++  +L +    + I++ I + GL
Sbjct: 635 FVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGL 693



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 221/499 (44%), Gaps = 56/499 (11%)

Query: 44  ILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSM-PDKALDVFQRMNEI 102
           +  R++D  LV +V     LI+ Q      D A  ++Q+   + + P++           
Sbjct: 269 LFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE----------- 317

Query: 103 FGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           + C   I  LC+  +  +A+  L SL +KG+K +   Y ++I+GL K+G    A  +   
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +  +G   +   Y+ LIDG  ++ +   A  + + + ME  V P+ VTY ++I+ L +  
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM-MEKGVQPSPVTYTIIIDELVREV 436

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D   ++ D+M     + D FTY  F+   C  G +E AE +   MV+ G+  + VTYN
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYN 496

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE----NGKVDEAISIWEL 335
           A+I G+   G   + F  ++ M   GC  N  SY +L+R L++    N     ++SIW++
Sbjct: 497 ALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556

Query: 336 LREK------------NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
              K               ++   +   +  LC+   L++A  +L E++         +A
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQ---------SA 607

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
           +L    D        YT  S++    +   L  A+     M + G  P + SY  +I+ L
Sbjct: 608 NLTPSED-------VYT--SIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSL 658

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+      A     +ML K +  + I + +LI+GL Q   +     L     +K + P  
Sbjct: 659 CEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSD 718

Query: 504 TMYNILIHGLCSAGKVEDA 522
            +Y  L       GK+ DA
Sbjct: 719 ALYARL------TGKITDA 731


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 212/410 (51%), Gaps = 22/410 (5%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           V++G  KSG +  A A+ DEM   GV  N +CYN L+D + ++ D  R +E+ E  +ME 
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLE--IMEN 195

Query: 201 -SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             +   V TY ++++ L   G   +   + D MK      D + Y + I+  C+AGNV  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIR 318
           A  V+ E V +GI  +  TY  +I+GFC+ G+++     L ++ GR    N + +N +I 
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G    G VD A+ +   + +     D  T+  L  GLC+                    R
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCR------------------VNR 357

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           +A+A +L++ M + G   N  T  +L++   +   +  A  LF+EM+ KG  P+VV+YN 
Sbjct: 358 MAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNV 417

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +++G  K     EA  F KEM +KG  PD+ TY+ L++G C + K+D+ALKL  +   +G
Sbjct: 418 MMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRG 477

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             P+V  Y  LI GL   G+ E+A QLY +M K    P+   Y+ L+  L
Sbjct: 478 TEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 190/386 (49%), Gaps = 18/386 (4%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           + G CK+G V+ A  +  EM   G+ ++A+ YN+++D + R        EL E+M   G 
Sbjct: 139 VDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGI 198

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
              V +Y IL+  L   G + +  ++ + ++ KN   D   +  +IN  C+ G + +A +
Sbjct: 199 EATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASE 258

Query: 367 ILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + +E V  G E                G++  A  L+  M   G   N    N++++G+ 
Sbjct: 259 VFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYC 318

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   ++NA+ +   M + G    V +YNTL  GLC+V R  EA + +  M+EKG  P+ +
Sbjct: 319 RQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYV 378

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LI+  C+   +  A +L  +   KG  P V  YN+++ G    G + +A +    M
Sbjct: 379 TYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEM 438

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +K+  VP++ TY +L+ G    G  D AL+++  +      P++++Y   + GL    R 
Sbjct: 439 EKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRS 498

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +AF+  +D L  G+ P    +  LV
Sbjct: 499 EEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 19/395 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  + + A+  L+ +   G++ +   Y ++++  V+  D      + + M   G+E  
Sbjct: 142 FCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEAT 201

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y IL+D     GD  + + + + +  + +V  +V  Y  +IN  C+ G      E++
Sbjct: 202 VGTYTILVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAYCRAGNVRRASEVF 260

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D    N  E +  TY   I+G CK G +E AE +  +M   G+  + + +N MIDG+CR 
Sbjct: 261 DECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQ 320

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +    ++   M + G  L+V +YN L  GL    ++ EA ++  ++ EK    +  T+
Sbjct: 321 GMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTY 380

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI+  CK G + +A ++  E+   G                 +G + +A      M+K
Sbjct: 381 TTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEK 440

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   + YT  SL++G     K++ A+ LF+EM  +G  P VV+Y  LI+GL K  R  E
Sbjct: 441 KGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEE 500

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           A+    +ML+ G  PD   YS L+  L    + D+
Sbjct: 501 AFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 118/215 (54%), Gaps = 11/215 (5%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWE 128
           ++I  Y +  M D AL V   M E  G E  +         LCR  +  +AK  L+ + E
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAM-EKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIE 370

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG+ P+  +Y T+I+   K GD++ A  +F EM  +G   +VV YN+++DG+ KKG  +R
Sbjct: 371 KGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS-IR 429

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             E + + + +  + P+V TY  +++G C  G+ D  L++++ MK    E +   Y + I
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
            GL K G  E A ++Y +M+++G+  D   Y+A++
Sbjct: 490 SGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 44/279 (15%)

Query: 377 GRLADAASLVNR-MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           G+LADAA+++ R +      ++    + +++GF ++ ++++A  L  EM R G     + 
Sbjct: 110 GQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALC 169

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLE----KGWKPDMITYSLLINGLCQSKKIDMALKLC 491
           YN+L++  C V R  +A   V+E+LE     G +  + TY++L++ L  +  I     + 
Sbjct: 170 YNSLLD--CYVRRKDDAR--VQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVV 225

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKV-------------------------------- 519
            +   K    DV +Y  +I+  C AG V                                
Sbjct: 226 DEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKI 285

Query: 520 ---EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
              E A  L ++M+ R    N + +NT++DG  + G  D AL++   + +  +  D+ +Y
Sbjct: 286 GQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTY 345

Query: 577 NITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           N    GLC  +RM++A   L+  + +G+ P  +T+  L+
Sbjct: 346 NTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLI 384


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 20/435 (4%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN L++   K G        +  ++    V PN  TY  ++  LC+  RF+E   ++  M
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCV-PNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  + F+Y   I GLC+   V+ A  +  EM++ G   + VTY +++ G C+ GK+
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           KE  +L+  M  +GC  + V YN+LI G  + G + EA  ++E + EK C     T+  L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++G  + G   +                    SL   M + GC  N +T N+L++GF + 
Sbjct: 199 LSGFSRKGEFGRV------------------QSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A  LF EM   GC P VVSYNTLI G+C   +  EA   ++EM+  G  PD+++Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++LI+G  +S  +D A+KL  +  + G  PD   Y+ +I  LC AGKV  A  ++ +M  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
               P+      L+ GL +     ++ E++  +++    P I  YN+ +  LC   R  D
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420

Query: 592 AFEFLNDALCRGILP 606
             E  ++   RG  P
Sbjct: 421 VCEIFHELTERGFSP 435



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 209/448 (46%), Gaps = 20/448 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++  L KSG        +++M   G   N   Y  L+    +   +  A+ ++  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             +    PNV +Y+++I GLC+  + DE  E+ + M     + +  TY S + GLCK G 
Sbjct: 79  AAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A  ++  MV  G   D V YN +IDGF + G + E + L+E M  KGC+  V +YN 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ G    G+     S+++ +  + C  +  T   L++G CK G                
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG---------------- 241

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
              + +A  L   M   GC  +  + N+L+ G     K   A  L +EM R G  P +VS
Sbjct: 242 --DMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN LI+G  K      A     E+ + G +PD  +YS +I+ LC++ K+  A  +    +
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PD  +   L+ GLC   ++ ++ +L+  M K  CVP +  YN LM  L K    D
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419

Query: 556 KALEIWNHILEERLRPDIISYNITLKGL 583
              EI++ + E    PD+    + L+ L
Sbjct: 420 DVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 221/435 (50%), Gaps = 20/435 (4%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           N +   G  P+ Y+YG ++  L ++     A +VF  M  +G   NV  Y+ILI G  + 
Sbjct: 41  NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                A E+   ++ +    PNVVTY  +++GLCK G+  E ++++ RM       D   
Sbjct: 101 QKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV 159

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   I G  K G++  A R++ EM+E G      TYN+++ GF R G+      L++ M 
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           R+GC+ N+ ++N L+ G  + G + EA  ++  +R   C  D  ++  LI G+C  G  +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPH 279

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A ++L E                  M + G   +  + N L++G+ ++  L++AI LF 
Sbjct: 280 EAQRLLRE------------------MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           E+ + G  P   SY+T+I+ LC+  + G A+   K+M+  G  PD      L+ GLC+ +
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++  + +L    ++    P +  YN+L++ LC A + +D  +++  + +R   P++    
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISK 441

Query: 543 TLMDGLFKTGDCDKA 557
            +++ L ++ D D A
Sbjct: 442 VILETLRRSDDKDAA 456



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 189/376 (50%), Gaps = 19/376 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           + +Y   +  L K+G  +     Y +M+ +G   +  TY  ++   C+A + +E   ++ 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +GC  NV SY+ILI GL    KVDEA  +   + +     +  T+G L++GLCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             +L +A  L +RM   GC  +    N L++GF +   +  A  
Sbjct: 137 ------------------KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+EM  KGC PTV +YN+L++G  +   FG   S  K+ML +G  P++ T++ L++G C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +   +  A +L  +    G  PDV  YN LI G+CS GK  +A +L   M +    P++V
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           +YN L+DG  K+G  D A++++  I +  L PD  SY+  +  LC   ++  AF    D 
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 600 LCRGILPTTITWHILV 615
           +  G  P       LV
Sbjct: 359 IANGSAPDAAVVIPLV 374



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 202/412 (49%), Gaps = 19/412 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
             ++YN ++  L K GR D     ++ M       +++TY   +  LC+A   E A  V+
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
           R M   G   +  +Y+ +I G CR  K+ E  EL   M   G   NVV+Y  L+ GL + 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GK+ EA+ ++  +  + C  D   + VLI+G  K G + +A ++  E+ E          
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE---------- 185

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                    GC    +T NSL++GF +  +      LFK+M R+GC P + ++N L++G 
Sbjct: 186 --------KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+    EA+    EM   G  PD+++Y+ LI G+C   K   A +L  + ++ G  PD+
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNILI G   +G ++ A++L+  + K    P+  +Y+T++D L + G    A  ++  
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++     PD       + GLC   R++++ E     +    +P    +++L+
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 207/405 (51%), Gaps = 20/405 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++FE+A+     +  +G  P+V+SY  +I GL +   +  A  + +EM + G + N
Sbjct: 62  LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L+ G  K G    A +++ R+V      P+ V YNV+I+G  K G   E   ++
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +       FTY S + G  + G     + ++++M+  G   +  T+N ++DGFC+ 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L+  M   GC  +VVSYN LIRG+   GK  EA  +   +       D  ++
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+G  K+G L+ AI++  E+                   K G + +A++ +++++  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIP------------------KSGLEPDAFSYSTIIDCL 342

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K+  A  +FK+M   G +P       L+ GLC+ ER  E+    + M++    P +
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             Y+LL+  LC++K+ D   ++  +  ++GF+PDV +  +++  L
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 193/379 (50%), Gaps = 20/379 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR ++ ++A   LN + + G +P+V +YG++++GL K G L  A+ +F  M  RG   +
Sbjct: 97  LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+LIDGF KKGD   A  ++E + +E    P V TYN +++G  + G F     ++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEM-LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     + FT+ + + G CK G++  A R++ EM   G   D V+YN +I G C  
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK 275

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E   L   M R G   ++VSYNILI G  ++G +D AI ++  + +     D+ ++
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+ LC+ G +  A  +  ++   G     DAA ++                 L+ G 
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSA--PDAAVVI----------------PLVIGL 377

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L  +  LF+ M +  C P +  YN L+  LCK +R  +      E+ E+G+ PD+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 469 ITYSLLINGLCQSKKIDMA 487
               +++  L +S   D A
Sbjct: 438 EISKVILETLRRSDDKDAA 456



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 18/315 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             +SYN L+  L ++G+ D     +  +    C  ++ T+G L+  LC+           
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQ----------- 64

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R  +A S+   M   GC  N ++ + L+ G  +  K++ A  L  EM   G
Sbjct: 65  -------AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+Y +L++GLCK+ +  EA      M+ +G  PD + Y++LI+G  +   +  A 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  + L+KG  P V  YN L+ G    G+      L+ +M ++ CVPN+ T+N L+DG 
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD  +A  ++  +      PD++SYN  ++G+CS  +  +A   L + +  G+ P  
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 609 ITWHILVRAVMNNGA 623
           ++++IL+     +GA
Sbjct: 298 VSYNILIDGYSKSGA 312


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 240/504 (47%), Gaps = 22/504 (4%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R+ +  W+    P+V+    V+    +  D   A  V   M  RG+      +  L+  +
Sbjct: 114 RWADRQWKYRHAPEVFDEMLVLLSRTRLHD--PARRVMRLMIRRGMPRGTRQFAHLMLSY 171

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + G    A  + + L+ +    P++   N+ +N L   GR D+ LE  +RM++   + D
Sbjct: 172 SRAGKLRSAMRVLQ-LMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPD 230

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   I GLC A  +  A  +   M+++G   D ++Y  ++   C+  ++ +   L E
Sbjct: 231 VVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLE 290

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M   G   + V+YN+LI GL ++G  DEA+S       K    D   +   ++  C NG
Sbjct: 291 RMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             R+A+A  ++  M   GC+ +  T +++++GF +  +L+ A  
Sbjct: 351 ------------------RMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARK 392

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           + K M + GC P  V++  L+NGLCKV +  EA+  + +  E+ W P  ITYS++++G  
Sbjct: 393 MMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFR 452

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  K+  +  +  Q LQKGF P     N+LIH LC+  K  DA       + + C  N+V
Sbjct: 453 REGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVV 512

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
            + T++ G  + GD + AL + + +      PD+++Y + +  L    +M +A   +   
Sbjct: 513 NFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKM 572

Query: 600 LCRGILPTTITWHILVRAVMNNGA 623
           L RG+ PT +T+  ++      GA
Sbjct: 573 LNRGLHPTPVTYRTVIHRYCEKGA 596



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/581 (25%), Positives = 271/581 (46%), Gaps = 39/581 (6%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
            F  A R+  Y H+P +F  +L  L   +L     R++ L+  +           ++ +Y
Sbjct: 112 FFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSY 171

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKGLKPD 134
            +      A+ V Q M +  GC   I         L    + +KA  F   +   G+ PD
Sbjct: 172 SRAGKLRSAMRVLQLMQKD-GCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPD 230

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           V +Y  +I GL  +  ++ AL +   M + G   + + Y  ++    K+      + + E
Sbjct: 231 VVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLE 290

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R+  +  ++P+ VTYN++I+GL K G  DE L      +      D   Y + +H  C  
Sbjct: 291 RMS-DAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLN 349

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
           G +  A+ +  EM+  G   D VTY+A++DGFCR G++ +  ++ + M + GC  N V++
Sbjct: 350 GRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 409

Query: 314 NILIRGLLENGKVDEAISIWELL---REKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
             L+ GL + GK  EA   WELL    E+     + T+ V+++G  + G L ++  ++ +
Sbjct: 410 TALLNGLCKVGKSSEA---WELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQ 466

Query: 371 VEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           + + G                 E + ADA   + +    GC +N     ++++GF +   
Sbjct: 467 MLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGD 526

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           LE+A+ L  +M      P VV+Y  +++ L +  +  EA S V++ML +G  P  +TY  
Sbjct: 527 LESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRT 586

Query: 474 LINGLCQSKKIDMALKLCCQFLQK-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           +I+  C+   ++  L L  + L K GF+   + YN +I  LC+ GK+ +A  L S + + 
Sbjct: 587 VIHRYCEKGAVEDLLNLLDKMLAKEGFS---SAYNQVIEKLCAFGKLSEANNLLSKVLRT 643

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
               +  T + LMD     G   ++  +   + +  L PD+
Sbjct: 644 ASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDL 684



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 234/508 (46%), Gaps = 20/508 (3%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           ++   E+F     +L R R  + A+R +  +  +G+      +  ++    ++G L  A+
Sbjct: 122 YRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAM 181

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            V   M + G   ++   N+ ++     G   +A E  ER+     V P+VVTYN +I G
Sbjct: 182 RVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERM-RRVGVDPDVVTYNCLIKG 240

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           LC   R  + LEM   M +N    D  +Y + +  LCK   V   + +   M ++GIF D
Sbjct: 241 LCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPD 300

Query: 276 AVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
            VTYN +I G  + G   E    L E  G++  ++ V Y+  +     NG++ EA  I  
Sbjct: 301 QVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIG 360

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            +  K C  D  T+  +++G C+ G L++A +++                    M K+GC
Sbjct: 361 EMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKH------------------MYKNGC 402

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           K N  T  +L+NG  +  K   A  L  +   +  +P+ ++Y+ +++G  +  +  E+  
Sbjct: 403 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCD 462

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
            V +ML+KG+ P  +  +LLI+ LC  +K   A     Q   KG   +V  +  +IHG  
Sbjct: 463 VVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFS 522

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G +E AL L  +M   N  P++VTY  ++D L + G   +A  +   +L   L P  +
Sbjct: 523 RQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPV 582

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCR 602
           +Y   +   C    + D    L+  L +
Sbjct: 583 TYRTVIHRYCEKGAVEDLLNLLDKMLAK 610


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 241/455 (52%), Gaps = 21/455 (4%)

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +KP + ++  +IN   + G +  A ++   + + G + +V     L+ G   KG  + A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +    V +     + V Y  +INGLCK G+  + ++M+ +MKK     +   Y + I G
Sbjct: 161 SLLHEYV-DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDG 219

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-- 308
           LCK G V+ A  +  EMVE+GI +D  +YN+MI GFC  G+ +   +L + M  +G +  
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V ++NILI GL + G+V EA ++  ++ ++    D  ++  L+NG C +G + +A Q+ 
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +++ E    R A                N  +  +L+NG+ +   ++ A+ L  EM  K 
Sbjct: 340 DKMVE----RTALP--------------NVISYCTLINGYCKVRMVDEAMVLLTEMHNKN 381

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V+YN L++GL K  R    +  V+ M   G   D+ITY++L++   + +K D AL
Sbjct: 382 LVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKAL 441

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            L    ++ G +P++  YNIL+ GLC +G+++ A +++  +  + C PN+ TYN ++ GL
Sbjct: 442 ALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGL 501

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            K G  D+A  +   ++     P+ I+++  ++ +
Sbjct: 502 CKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 218/451 (48%), Gaps = 18/451 (3%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +N L+    K   Y     ++  L  + ++ P+++T++++IN   + G+      +   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            K   + D     + + GLC  G V  A  +  E V+ G   D V Y  +I+G C+ GK 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 293 KECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           ++  +++  M + +   N++ YN +I GL + G VDEA  +   + E     D  ++  +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           I+G C  G    A+++L+E+   G+                    + YT N L++G  + 
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGK-----------------VYPDVYTFNILIDGLCKL 294

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            ++  A  +   M ++G  P +VSYN L+NG C     GEA     +M+E+   P++I+Y
Sbjct: 295 GRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISY 354

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
             LING C+ + +D A+ L  +   K   PD   YN L+ GL  +G+      L   M+ 
Sbjct: 355 CTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRA 414

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                +L+TYN L+D  FK    DKAL ++ HI+E  + P+I +YNI L GLC   R+  
Sbjct: 415 SGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKY 474

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A E       +G  P   T++I++  +   G
Sbjct: 475 AKEIFQLLSAKGCQPNIRTYNIMIHGLCKEG 505



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 20/418 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           Q   A   L ++ + G + DV    T++ GL   G +L A+++  E  +RG   + VCY 
Sbjct: 120 QMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYG 179

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            +I+G  K G    A +++ ++  +  VYPN++ YN +I+GLCK G  DE   +   M +
Sbjct: 180 TIINGLCKIGKTRDAIQMFPKM-KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVE 238

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIK 293
           N  E D ++Y S IHG C  G  + A ++  EMV  G ++ D  T+N +IDG C+ G++ 
Sbjct: 239 NGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVS 298

Query: 294 ECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E + +  VM ++G   ++VSYN L+ G   +G V EA  +++ + E+    +  ++  LI
Sbjct: 299 EAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLI 358

Query: 353 NGLCKNGYLNKAIQILNEVEE-----------------GGEGRLADAASLVNRMDKHGCK 395
           NG CK   +++A+ +L E+                      GR      LV  M   G  
Sbjct: 359 NGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQP 418

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T N L++ + +  K + A+ LF+ +   G SP + +YN L++GLCK  R   A   
Sbjct: 419 ADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEI 478

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
            + +  KG +P++ TY+++I+GLC+   +D A  L  + +   + P+   ++ ++  +
Sbjct: 479 FQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 198/383 (51%), Gaps = 20/383 (5%)

Query: 98  RMNEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
           R +E+ +G     LC+  +   A +    + +  + P++  Y TVI+GL K G +  A  
Sbjct: 172 RFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACG 231

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +  EM E G+E +V  YN +I GF   G +  A ++ + +V+   VYP+V T+N++I+GL
Sbjct: 232 LCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGL 291

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK GR  E   +   M K   + D  +Y + ++G C +G+V  A++V+ +MVE     + 
Sbjct: 292 CKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNV 351

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           ++Y  +I+G+C+   + E   L   M  K  + + V+YN L+ GL ++G+      + E 
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           +R     AD  T+ VL++   K+   +KA+ +   + E                   G  
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE------------------IGIS 453

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N  T N L++G  ++ +L+ A  +F+ +S KGC P + +YN +I+GLCK     EA + 
Sbjct: 454 PNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEAL 513

Query: 456 VKEMLEKGWKPDMITYSLLINGL 478
           + +M+   + P+ IT+  ++  +
Sbjct: 514 LYKMVNNNYLPNYITFDTIVRAI 536



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 172/331 (51%), Gaps = 19/331 (5%)

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADS-TTHGVLINGLCKNGYLNKAIQILNEV 371
           +N L+  L++  + +  +S++ +L+ K     S  T  +LIN   + G +  A  +L  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            + G                 +GR+ +A SL++     G + +     +++NG  +  K 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
            +AI +F +M +    P ++ YNT+I+GLCK     EA     EM+E G + D+ +Y+ +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 475 INGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           I+G C   +   A+KL  + + +G   PDV  +NILI GLC  G+V +A  + + M KR 
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P++V+YN LM+G   +G   +A ++++ ++E    P++ISY   + G C    + +A 
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNGAS 624
             L +   + ++P T+T++ L+  +  +G S
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEK 129
           ++  Y K+   DKAL +FQ + EI G    I         LC+  + + AK     L  K
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEI-GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           G +P++ +Y  +I+GL K G L  A A+  +M       N + ++ ++     K
Sbjct: 486 GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILVK 539


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 243/487 (49%), Gaps = 35/487 (7%)

Query: 109 ILCRKRQFEKAKRFL-NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           +L R      A  FL +SL      PDV ++ ++++ L ++G+L G   +F  M E  V+
Sbjct: 104 LLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVK 163

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECL 226
            ++V Y IL++   K G    A ++ +R+    S V  ++V  N +++GLCK GR  + +
Sbjct: 164 PDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAI 223

Query: 227 EMWD-RMKKNER-EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              D RM++      ++ TY       C+ G+++ A ++   M + G+  + +T N ++ 
Sbjct: 224 VFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVG 283

Query: 285 GFCRAGKIKECFELW--------EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELL 336
           G CR G++    + +        E  G     N V+Y+ L+   L    V  A+ ++  +
Sbjct: 284 GLCRVGRVGAALDFFREKRTTWLEARG-----NAVTYSTLVSAFLHCNNVALAMELFHEM 338

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
            ++    D+  +  +I+GL +                   GRL DA ++   M K G KL
Sbjct: 339 ADQGYPPDAVMYFTMISGLTQ------------------AGRLVDACNIAASMKKAGFKL 380

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +    N L+ GF +  +L  A  LF+EM   G  P V +YNTL++ LCK   F      +
Sbjct: 381 DRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELL 440

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
             M++ G +P ++T+  L++G C++ K D ALK+     +    P+  +YN LI  LC +
Sbjct: 441 GNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKS 500

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
            +V+ A++L+  M++ N   N+ TYN L+ GL      +KA E+ + + EER  PD ++ 
Sbjct: 501 REVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTM 560

Query: 577 NITLKGL 583
           ++ ++ L
Sbjct: 561 DVLMEWL 567



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 255/558 (45%), Gaps = 44/558 (7%)

Query: 9   LNLLKAEKNPHTALALFDSATREPGYAHSPH----LFHHILRRLIDPKLVVHVSRILELI 64
           L+LL+A  +P  A  L+     EP +A +P     L     R  I P     +S++L   
Sbjct: 52  LSLLRA--SPGLASELY-GLIGEPSHAFTPASLATLHSLAARHCIPPPSASLLSKLL--- 105

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLN 124
              +   P D A S ++       P   +  F  +    G       R            
Sbjct: 106 --ARFSSPADAA-SFLRDSLAAGAPAPDVSTFNSLLSALG-------RAGNLRGMTELFT 155

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE--TNVVCYNILIDGFFK 182
           S+ E  +KPD+ +YG ++N L K+G +  AL V D M   G +   ++V  N ++DG  K
Sbjct: 156 SMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCK 215

Query: 183 KGDYMRAKE-IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
            G    A   + ER+       PN VTYN + +  C+ G  D   ++ +RM+K     + 
Sbjct: 216 IGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNV 275

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELW 299
            T  + + GLC+ G V  A   +RE   + +    +AVTY+ ++  F     +    EL+
Sbjct: 276 ITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELF 335

Query: 300 EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  +G   + V Y  +I GL + G++ +A +I   +++     D   + +LI G C+ 
Sbjct: 336 HEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRK 395

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
             L++A Q+  E                  M   G + + YT N+L++   +A       
Sbjct: 396 KRLHEAHQLFEE------------------MKGAGLQPDVYTYNTLLSCLCKAGDFSAVD 437

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L   M   GC P+VV++ TL++G CK  +  EA    + M E   +P+ + Y+ LI+ L
Sbjct: 438 ELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFL 497

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C+S+++D+A+KL  +  +     +VT YN L+ GL      E A +L   MK+  C P+ 
Sbjct: 498 CKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDY 557

Query: 539 VTYNTLMDGLFKTGDCDK 556
           VT + LM+ L + G+ ++
Sbjct: 558 VTMDVLMEWLPEIGETER 575



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 25/340 (7%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V ++N L+  L   G +     ++  +RE +   D  T+G+L+N LCK G +  A+++L
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVL 189

Query: 369 NEVEEGGE-------------------GRLADAASLVN-RMDK-HGCKLNAYTCNSLMNG 407
           + +   G                    GRL DA   V+ RM + HGC  N  T N L + 
Sbjct: 190 DRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA 249

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW--- 464
             +   ++ A  + + M ++G +P V++ NT++ GLC+V R G A  F +E     W   
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREK-RTTWLEA 308

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
           + + +TYS L++       + +A++L  +   +G+ PD  MY  +I GL  AG++ DA  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           + ++MKK     +   YN L+ G  +     +A +++  +    L+PD+ +YN  L  LC
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
                S   E L + +  G  P+ +T+  LV      G +
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKT 468



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 31/386 (8%)

Query: 90  DKALDVFQRMNEIFGCE---------AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
           D  + V +RM ++ GC          A   CR    + A + +  + ++G+ P+V +  T
Sbjct: 221 DAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNT 280

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVET--NVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           ++ GL + G +  AL  F E     +E   N V Y+ L+  F    +   A E++  +  
Sbjct: 281 IVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMA- 339

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +    P+ V Y  MI+GL + GR  +   +   MKK   + D   Y   I G C+   + 
Sbjct: 340 DQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLH 399

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A +++ EM  +G+  D  TYN ++   C+AG      EL   M   GC  +VV++  L+
Sbjct: 400 EAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLV 459

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G  + GK DEA+ I+  + E     ++  +  LI+ LCK+  ++ AI++ +E+ E    
Sbjct: 460 HGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRE---- 515

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                         +    N  T N+L+ G    +  E A  L  +M  + C+P  V+ +
Sbjct: 516 --------------NNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMD 561

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKG 463
            L+  L ++        F+++  EKG
Sbjct: 562 VLMEWLPEIGETERLKCFMEQRDEKG 587



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 2/262 (0%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A    + + ++G  PD   Y T+I+GL ++G L+ A  +   M + G + +   YNILI 
Sbjct: 331 AMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIG 390

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           GF +K     A +++E +     + P+V TYN +++ LCK G F    E+   M  +  +
Sbjct: 391 GFCRKKRLHEAHQLFEEM-KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQ 449

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
               T+ + +HG CKAG  + A +++R M E+ I  + V YN +ID  C++ ++    +L
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKL 509

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           ++ M       NV +YN L++GL +    ++A  + + ++E+ C  D  T  VL+  L +
Sbjct: 510 FDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPE 569

Query: 358 NGYLNKAIQILNEVEEGGEGRL 379
            G   +    + + +E G  +L
Sbjct: 570 IGETERLKCFMEQRDEKGGAKL 591



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 12/219 (5%)

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +S  + A FL   ++    +P V ++N+L++ L +             M E   KPD++T
Sbjct: 109 SSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVT 168

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKG--FTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           Y +L+N LC++  +  ALK+  +    G     D+ + N ++ GLC  G+++DA+     
Sbjct: 169 YGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDE 228

Query: 529 MKKR--NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             ++   C PN VTYN L D   + GD D A +I   + +E + P++I+ N  + GLC  
Sbjct: 229 RMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRV 288

Query: 587 SRMSDAFEFLNDAL-----CRGILPTTITWHILVRAVMN 620
            R+  A +F  +        RG     +T+  LV A ++
Sbjct: 289 GRVGAALDFFREKRTTWLEARG---NAVTYSTLVSAFLH 324



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
            LFH +  +   P  V++ + I  L +  +     ++A S+ +A  K  +  KA ++   
Sbjct: 333 ELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFK--LDRKAYNIL-- 388

Query: 99  MNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
                    G  CRK++  +A +    +   GL+PDVY+Y T+++ L K+GD      + 
Sbjct: 389 --------IGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELL 440

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
             M + G + +VV +  L+ G+ K G    A +I+ R + E  + PN V YN +I+ LCK
Sbjct: 441 GNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIF-RSMGEARIQPNTVIYNTLIDFLCK 499

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
               D  ++++D M++N    +  TY + + GL      E A  +  +M E     D VT
Sbjct: 500 SREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVT 559

Query: 279 YNAMIDGFCRAGKIK--ECF 296
            + +++     G+ +  +CF
Sbjct: 560 MDVLMEWLPEIGETERLKCF 579


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 246/509 (48%), Gaps = 18/509 (3%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+ PD+ S   ++    +      ALA+F EM  RG   +   ++ L+    K+G +  
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHED 210

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  +++ +     + P+   Y + I  LCK G     L M   MK+   +   FTY + +
Sbjct: 211 AVRLFDEMP-GAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
             L K G +E A RV  EM ++G  +D +    ++ G+C   ++     L++   + G +
Sbjct: 270 DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV 329

Query: 309 NV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
              V Y +LIRG  + G   +A  +   +  +     +    +++ GL  +     A+ +
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 368 LNEVEEGG----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
             E+ + G                  +L +A +L +RM K G K +  T NSL+ G+ + 
Sbjct: 390 FEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             ++ A+ L+ EM  +G  P VV+Y TL+ G    + F  AY+ + EM + G   +  TY
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTY 509

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++LING+C   ++     +   F+ +GF P +  YN +I+G   AG +  A  +Y  M++
Sbjct: 510 NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +   PN++TY + +DG  +TG  D AL++ N +    L+PDI++YN  + G C    MS 
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMN 620
           A + L   L  G+ P T+ ++ L+    N
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKN 658



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 255/538 (47%), Gaps = 24/538 (4%)

Query: 86  NSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           + MP   +D  QR   ++      LC+     +A R L  + E G     ++Y T+++ L
Sbjct: 216 DEMPGAEIDPDQR---VYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVL 272

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           VK+G +  AL V DEM + G + +V+    L+ G+  + +   A  +++   ++  + P 
Sbjct: 273 VKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE-TLKDGIVPT 331

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
            V Y V+I G  + G   +  E+  +M        +F     + GL      + A  ++ 
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFE 391

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           EM +SG+  D  TYN +I   C+A K++E   L++ M + G   ++ +YN L+ G  + G
Sbjct: 392 EMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            +DEA+ ++  +  +    +  T+  L+ G       + A  +L+E              
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE-------------- 496

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
               M ++G   N YT N L+NG     ++     + K    +G  PT+++YN++ING  
Sbjct: 497 ----MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K    G A++  ++M EKG  P++ITY+  I+G C++   DMALK+     ++G  PD+ 
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIV 612

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN LI+G C  G +  ALQL   + K    PN V YN+L+ G        +  + +  +
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++  +  D  +Y   + G      ++ A E  ++ + +G +P   T+  L   +  +G
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSG 730



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 215/445 (48%), Gaps = 21/445 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L   R+++ A      + + GL PDV++Y  +I+   ++  L  AL +FD M + GV+ +
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YN L+ G+ KKG    A +++  + ME    PNVVTY  ++ G      FD    + 
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPME-GFKPNVVTYITLMRGYIAKKDFDNAYALL 494

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D MK+N    + +TY   I+G+C    V   + + +  +  G     +TYN++I+GF +A
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +   F +++ M  KG   N+++Y   I G    G  D A+ +   +R +    D   +
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAY 614

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C+ G ++ A+Q+L  +                   K G   N    NSL+ G+
Sbjct: 615 NALINGFCQEGNMSHALQLLVILL------------------KDGLAPNTVVYNSLITGY 656

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
              + ++     ++ M + G      +Y TLI+G  K      A     EM+ KG+ PD 
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            T++ L +GLC+S  ID A KL  +  +    P+V +YN+LI+G     K+++A +L+  
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDE 776

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGD 553
           M      P+  TY+ L+   F   D
Sbjct: 777 MLNMGIQPDDTTYDILVSKKFLEAD 801



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 23/186 (12%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE------LIEIQKCY------ 70
           AL +   +E   +H+  L   +L+  + P  VV+ S I        + E+ K Y      
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675

Query: 71  ---CPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
                     ++I  + K+     AL+++  M           F      LCR    + A
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGA 735

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           K+ L  +    ++P+V+ Y  +ING ++   L  A  + DEM   G++ +   Y+IL+  
Sbjct: 736 KKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795

Query: 180 FFKKGD 185
            F + D
Sbjct: 796 KFLEAD 801



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/131 (19%), Positives = 50/131 (38%)

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
              + +G  PD+     L+         +DAL L+  M+ R    +   ++ LM    K 
Sbjct: 146 AHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           G  + A+ +++ +    + PD   Y + +  LC       A   L +    G      T+
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265

Query: 612 HILVRAVMNNG 622
             +V  ++  G
Sbjct: 266 RTMVDVLVKTG 276


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 282/592 (47%), Gaps = 45/592 (7%)

Query: 39  HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQR 98
           H+F+ +LR+ + P L  + +                    +I  Y +N   D+AL V   
Sbjct: 350 HIFNEMLRQGLKPSLATYTT--------------------LIDGYCRNGTIDEALRVLYE 389

Query: 99  MNEIFGCEAGILCRKRQF----EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGA 154
           M ++ G +   +           +A    +++ + G  PDVY+Y  ++ GL K G L+ A
Sbjct: 390 M-QVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQA 448

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
                 +       +    N L+ G    G    A ++ E++V   +  P++ TY ++++
Sbjct: 449 KEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMV-TINFIPDIHTYTILLS 507

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIF 273
           G C+ G+    + +   M +     D  TY   + GL K G V+ A  +++E++ + G++
Sbjct: 508 GFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMY 567

Query: 274 VDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
            D + YN+M++G+ +AGK+ +    ++++   K   N  SYNIL+ G ++ G +  +I +
Sbjct: 568 ADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYL 627

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           ++ +  K     + T+ +LI GL K+G +  A++ L+++   G                 
Sbjct: 628 YKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSE 687

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           + R++DA  L N M       ++ T ++++NG I+ + L+++  + ++M   G  P    
Sbjct: 688 KSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTH 747

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y  LIN  C+      A+   +EM   G  P  +  S ++ GL +  K++  + + C  +
Sbjct: 748 YIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSII 807

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G  P +  +  L+HGLC   K+ DAL L S M+      ++VTYN L+ GL K     
Sbjct: 808 RAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVS 867

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
            ALE++  +  + LRP++ +Y    + +    R  +  + LND   RG++P+
Sbjct: 868 DALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 153/569 (26%), Positives = 265/569 (46%), Gaps = 35/569 (6%)

Query: 65  EIQKCYCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKR 114
           +++ C  P  +   +++  Y K      A+ V + M E  G EA +         LC+ +
Sbjct: 250 KMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDM-EKNGVEADVYTYNIMIDKLCKMK 308

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +   A   L  +    L PD  +Y T+I G      ++ A+ +F+EM  +G++ ++  Y 
Sbjct: 309 RSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYT 368

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LIDG+ + G    A  +   + +   V P+ VTY+ M+N     G   E   ++D M+K
Sbjct: 369 TLIDGYCRNGTIDEALRVLYEMQV-AGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEK 422

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                D +TY + + GLCK G++  A+     +V     +D  T NA++ G C  G + E
Sbjct: 423 YGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDE 482

Query: 295 CFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
             +L E M     + ++ +Y IL+ G    GK+  A+ + +++ EK    D  T+  L+ 
Sbjct: 483 ALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLK 542

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           GL K G +  A  +  E+    EG  AD                AY  NS+MNG+++A K
Sbjct: 543 GLIKEGQVKAASYLFQEI-ICKEGMYADCI--------------AY--NSMMNGYLKAGK 585

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           L        +M++    P   SYN L++G  K      +    K+M+ KG KP  +TY L
Sbjct: 586 LHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRL 645

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LI GL +   I++A+K   + + +G  PD   +++LI+      ++ DALQL++ MK   
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY 705

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             P+  TY+ +++GL +      + ++   ++E  L P    Y   +   C    ++ AF
Sbjct: 706 MSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAF 765

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
               +    GI+P  +    +VR +   G
Sbjct: 766 RLKEEMTALGIVPAEVADSSIVRGLSKCG 794



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 246/517 (47%), Gaps = 26/517 (5%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL     +    DV +   V+N +   G+L GA  +  +M    +  NV+ YN ++  + 
Sbjct: 212 FLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLP-NVITYNTILHWYV 270

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           KKG +  A  + E +  +  V  +V TYN+MI+ LCK  R      +  RM+ +    D 
Sbjct: 271 KKGRFKAAMCVLEDM-EKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDE 329

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY + I G      +  A  ++ EM+  G+     TY  +IDG+CR G I E   +   
Sbjct: 330 CTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYE 389

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G   + V+Y+ ++     NG V EA S+++ + +  C+ D  T+  L+ GLCK G+
Sbjct: 390 MQVAGVKPSEVTYSAML-----NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGH 444

Query: 361 LNKA-------IQILNEVEEG----------GEGRLADAASLVNRMDKHGCKLNAYTCNS 403
           L +A       + I + +++             G L +A  L  +M       + +T   
Sbjct: 445 LVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTI 504

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML-EK 462
           L++GF +  K+  A+ L + M  KG  P +V+Y  L+ GL K  +   A    +E++ ++
Sbjct: 505 LLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKE 564

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G   D I Y+ ++NG  ++ K+           Q    P+   YNIL+HG    G +  +
Sbjct: 565 GMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRS 624

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           + LY +M ++   P  VTY  L+ GL K G  + A++  + ++ E + PD +S+++ +  
Sbjct: 625 IYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINA 684

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
               SRMSDA +  N      + P++ T+  ++  ++
Sbjct: 685 FSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLI 721



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 225/495 (45%), Gaps = 27/495 (5%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G K   ++   V+N LV+ G+         E   R    +V   NI+++    +G+   A
Sbjct: 185 GFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGA 244

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           K +  +  M++   PNV+TYN +++   K GRF   + + + M+KN  E D +TY   I 
Sbjct: 245 KHMIHK--MKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMID 302

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LCK      A  + + M    +  D  TYN +I GF    K+     ++  M R+G   
Sbjct: 303 KLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKP 362

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++ +Y  LI G   NG +DEA+ +   ++         T+  ++N               
Sbjct: 363 SLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN--------------- 407

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                   G + +A S+ + M+K+GC  + YT  +L+ G  +   L  A      +    
Sbjct: 408 --------GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIP 459

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            +    + N L+ G+C      EA    ++M+   + PD+ TY++L++G C+  KI  A+
Sbjct: 460 SAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAV 519

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVPNLVTYNTLMDG 547
            L    L+KG  PD+  Y  L+ GL   G+V+ A  L+  +  K     + + YN++M+G
Sbjct: 520 ILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNG 579

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K G   K       + + ++ P+  SYNI + G      +S +     D + +GI PT
Sbjct: 580 YLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPT 639

Query: 608 TITWHILVRAVMNNG 622
            +T+ +L+  +  +G
Sbjct: 640 NVTYRLLILGLSKHG 654



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 237/517 (45%), Gaps = 37/517 (7%)

Query: 19  HTALALFDSATREPGYAHSP--HLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           H A +++D+  +   Y  SP  + + ++LR L     +V     +  I        +   
Sbjct: 411 HEAFSVYDNMEK---YGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTL 467

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWE 128
            +++     +   D+ALD+ ++M  I        +       CRK +   A   L  + E
Sbjct: 468 NALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLE 527

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYNILIDGFFKKGDYM 187
           KGL PD+ +Y  ++ GL+K G +  A  +F E+  + G+  + + YN +++G+ K G   
Sbjct: 528 KGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLH 587

Query: 188 RAK-EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
           + +  I++  + +  VYPN  +YN++++G  K G     + ++  M +   +  + TY  
Sbjct: 588 KVEMTIYD--MNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRL 645

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG-RK 305
            I GL K G +E A +   +MV  GI+ D ++++ +I+ F    ++ +  +L+  M    
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY 705

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +  +Y+ +I GL+    +  +  +   + E       T +  LIN  C+ G +N A 
Sbjct: 706 MSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAF 765

Query: 366 QILNEVEEGG--EGRLADAASLVNRMDKHG---------CKL-------NAYTCNSLMNG 407
           ++  E+   G     +AD+ S+V  + K G         C +          T  +LM+G
Sbjct: 766 RLKEEMTALGIVPAEVADS-SIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHG 824

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             + +K+ +A+ L   M   G    VV+YN LI GLCK++   +A    +EM  KG +P+
Sbjct: 825 LCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPN 884

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           + TY+ L   +  + +     KL      +G  P  T
Sbjct: 885 VTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSYT 921



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 157/317 (49%), Gaps = 38/317 (11%)

Query: 314 NILIRGLLENGKVDEAISIWELLRE---KNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           N ++  L+E G   E+  +W  L+E   +    D TT  +++N +C              
Sbjct: 194 NAVLNALVEIG---ESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCI------------- 237

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKL-NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                EG L  A  ++++M    C L N  T N++++ +++  + + A+ + ++M + G 
Sbjct: 238 -----EGNLKGAKHMIHKMK--SCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGV 290

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              V +YN +I+ LCK++R   AY  +K M      PD  TY+ LI G     K+ +A+ 
Sbjct: 291 EADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIH 350

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + L++G  P +  Y  LI G C  G +++AL++   M+     P+ VTY+ +++   
Sbjct: 351 IFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN--- 407

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
             G   +A  +++++ +    PD+ +Y   L+GLC    +  A EF++   C   +P+ I
Sbjct: 408 --GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMS---CIVHIPSAI 462

Query: 610 ---TWHILVRAVMNNGA 623
              T + L+  + N+G+
Sbjct: 463 DQKTLNALLLGICNHGS 479



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 1/249 (0%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           E R+ DA+  +  MD  G K +A+ CN+++N  ++  + ++  F  KE   +     V +
Sbjct: 168 EKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTT 227

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            N ++N +C       A   + +M +    P++ITY+ +++   +  +   A+ +     
Sbjct: 228 CNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDME 286

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G   DV  YNI+I  LC   +   A  L   M+  N  P+  TYNTL+ G F      
Sbjct: 287 KNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMM 346

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A+ I+N +L + L+P + +Y   + G C    + +A   L +    G+ P+ +T+  ++
Sbjct: 347 LAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML 406

Query: 616 RAVMNNGAS 624
              ++   S
Sbjct: 407 NGSVHEAFS 415



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 3/262 (1%)

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
           ++A+ +L  +   G    A  +SL+  + +  C  N    + L+N +++  ++ +A    
Sbjct: 121 SQAMSLLKHLAMTGFSCSAVFSSLLCTISR--CDSNPLVFDLLVNAYVKEKRVVDASMAI 178

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
             M   G   +  + N ++N L ++      + F+KE L + +  D+ T ++++N +C  
Sbjct: 179 LFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIE 238

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
             +  A K     ++    P+V  YN ++H     G+ + A+ +  +M+K     ++ TY
Sbjct: 239 GNLKGA-KHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTY 297

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N ++D L K      A  +   +  + L PD  +YN  +KG    S+M  A    N+ L 
Sbjct: 298 NIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLR 357

Query: 602 RGILPTTITWHILVRAVMNNGA 623
           +G+ P+  T+  L+     NG 
Sbjct: 358 QGLKPSLATYTTLIDGYCRNGT 379


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 209/416 (50%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  + R
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLE 322
           EM E  GI  +  TY  +I G+C+ G++ E  ++++ M  KG +    V YN LI G  +
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   + + E+       T+ +L++ L                    +GR  +A
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM------------------DGRGTEA 271

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             LV  M   G   + +T N L+NG  +   ++ A+ +F+ MSR+G   TVV+Y  LI  
Sbjct: 272 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 331

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  E      E + +G +PD++ Y+ LIN    S  ID A ++  +  +K   PD
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ GLC  G+V++A +L   M +R   P+LVTYNTL+ G    GD   AL I N
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 451

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++ +   P +++YN  ++GLC   +  DA   + + +  GI P   T+  L+  +
Sbjct: 452 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 204/402 (50%), Gaps = 22/402 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           E+  +    N V YN +I GF  +G    A +I   +     + PN  TY  +I+G CK 
Sbjct: 135 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 220 GRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           GR DE ++++D M  K E + ++  Y + I G C  G ++ A      MVE G+ +   T
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++      G+  E +EL E MG KG   +V +YNILI G  + G V +A+ I+E + 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +   A   T+  LI  L K G + +  ++ +E                    + G + +
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV------------------RRGIRPD 356

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               N+L+N    +  ++ A  +  EM +K  +P  V+YNTL+ GLC + R  EA   + 
Sbjct: 357 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM E+G +PD++TY+ LI+G      +  AL++  + + KGF P +  YN LI GLC  G
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
           + +DA  +   M +    P+  TY +L++GL  T + ++A++
Sbjct: 477 QGDDAENMVKEMVENGITPDDSTYISLIEGL--TTEDERAID 516



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 206/398 (51%), Gaps = 26/398 (6%)

Query: 89  PDKALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVIN 143
           P +AL++ ++M       +       C + + + A   +  + E+G + P+ Y+YGTVI+
Sbjct: 130 PARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 189

Query: 144 GLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           G  K G +  A+ VFDEM  +G V+   V YN LI G+  +G    A    +R+V E  V
Sbjct: 190 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV-ERGV 248

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
              V TYN++++ L   GR  E  E+ + M       D FTY   I+G CK GNV+ A  
Sbjct: 249 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE 308

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           ++  M   G+    VTY A+I    + G+++E  +L++   R+G   ++V YN LI    
Sbjct: 309 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 368

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G +D A  I   + +K    D  T+  L+ GLC          +L        GR+ +
Sbjct: 369 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC----------LL--------GRVDE 410

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L++ M + G + +  T N+L++G+     +++A+ +  EM  KG +PT+++YN LI 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           GLCK  +  +A + VKEM+E G  PD  TY  LI GL 
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 210/432 (48%), Gaps = 26/432 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N+++            L ++ RMK       + +    +H L  A     A  ++ +M  
Sbjct: 52  NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 107

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
             + +   T+N M+   C AGK     EL   M R    N V+YN +I G    G+V  A
Sbjct: 108 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP---NAVTYNTVIAGFCSRGRVQAA 164

Query: 330 ISIWELLREKNCNA-DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------------ 376
           + I   +RE+   A +  T+G +I+G CK G +++A+++ +E+   GE            
Sbjct: 165 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 G+L  A    +RM + G  +   T N L++      +   A  L +EM  KG +
Sbjct: 225 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 284

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V +YN LING CK     +A    + M  +G +  ++TY+ LI  L +  ++    KL
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + +++G  PD+ +YN LI+   ++G ++ A ++   M+K+   P+ VTYNTLM GL  
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D+A ++ + + E  ++PD+++YN  + G      + DA    N+ + +G  PT +T
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 464

Query: 611 WHILVRAVMNNG 622
           ++ L++ +  NG
Sbjct: 465 YNALIQGLCKNG 476



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 11/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +VI  + K    D+A+ VF  M           ++    G  C + + + A  + + + E
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 245

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+   V +Y  +++ L   G    A  + +EM  +G+  +V  YNILI+G  K+G+  +
Sbjct: 246 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 305

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E +     V   VVTY  +I  L K G+  E  +++D   +     D   Y + I
Sbjct: 306 ALEIFENMS-RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +    +GN++ A  +  EM +  I  D VTYN ++ G C  G++ E  +L + M  +G  
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN LI G    G V +A+ I   +  K  N    T+  LI GLCKNG  + A  +
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 368 LNEVEEGG 375
           + E+ E G
Sbjct: 485 VKEMVENG 492



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 402 NSLMNGFIQASKL----ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           +SL N  + AS        ++ L+  M       +  S + L++ L        A++   
Sbjct: 48  SSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPS----APAFALFA 103

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M          T+++++  LC + K   AL+L  Q  +    P+   YN +I G CS G
Sbjct: 104 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 159

Query: 518 KVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIIS 575
           +V+ AL +   M++R  + PN  TY T++ G  K G  D+A+++++ +L +  ++P+ + 
Sbjct: 160 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 219

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G C   ++  A  + +  + RG+  T  T+++LV A+  +G  T
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 269



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T  AL  + +++     +  LF   +RR I P LV++ +    LI         D A  +
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA----LINSHSTSGNIDRAFEI 379

Query: 80  IQAYGKNSM-PDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +    K  + PD   DV       +      LC   + ++A++ ++ + E+G++PD+ +Y
Sbjct: 380 MGEMEKKRIAPD---DV------TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            T+I+G    GD+  AL + +EM  +G    ++ YN LI G  K G    A+ + + +V 
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 489

Query: 199 ETSVYPNVVTYNVMINGLC 217
           E  + P+  TY  +I GL 
Sbjct: 490 ENGITPDDSTYISLIEGLT 508


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 234/455 (51%), Gaps = 20/455 (4%)

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N +  ++L+  + K G+   A E ++R   +     + ++ N M+  L K GR      +
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDR-AGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M +     +  T+   I+GLCK G  + A  V  +M   G     +TYN +IDG+C+
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 289 AGKI-KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           AGK+ K    L E++ ++   N +++NILI G   +  V  A  ++E ++ +    +  T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  LINGLC NG L++A+                   L ++M   G K N  T N+L+NG
Sbjct: 337 YNSLINGLCSNGKLDEAL------------------GLQDKMSGMGLKPNVVTYNALING 378

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +   L+ A  +  ++ ++G +P V+++NTLI+   K  R  +A+     ML+ G  P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           + TY+ LI G C+   +  A KL  +    G   D+  YNIL+  LC  G+   A++L  
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M +    P+ +TYN L+DG F+ G+   AL +   + ++  R +I++YN+ +KG C+  
Sbjct: 499 EMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKG 558

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++ +A   LN+ L +G++P   T+ IL   +M  G
Sbjct: 559 KLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 258/540 (47%), Gaps = 45/540 (8%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L +L  +E  P   L  F    +E G  H+   F  +L  L + K    +  +L+     
Sbjct: 77  LQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKN 136

Query: 68  KCYCPEDV--ALSVIQAYG---------------KNSMPDKALDVFQRMNE------IFG 104
             Y    +  +LSV+ ++G               KN   D AL+ F R  +         
Sbjct: 137 AHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS 196

Query: 105 CEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           C   +  L ++ +    +     +  + +  +V ++  VINGL K G    A  V ++M 
Sbjct: 197 CNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G   +V+ YN +IDG+ K G   +A  + + +V +  ++PN +T+N++I+G C+    
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENV 315

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
               ++++ M++   + +  TY S I+GLC  G ++ A  +  +M   G+  + VTYNA+
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 283 IDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+GFC+   +KE  E+ + +G++G   NV+++N LI    + G++D+A  +  ++ +   
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             + +T+  LI G C+                  EG + +A  L   M+ +G K +  T 
Sbjct: 436 CPNVSTYNCLIVGFCR------------------EGNVKEARKLAKEMEGNGLKADLVTY 477

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N L++   +  +   A+ L  EM   G +P+ ++YN LI+G  +      A +    M +
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEK 537

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG + +++TY++LI G C   K++ A +L  + L+KG  P+ T Y+IL   +   G + D
Sbjct: 538 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 204/450 (45%), Gaps = 52/450 (11%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+D F K   Y  +       V+ +    N +  ++++    K G  D  LE +DR    
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                + +    +  L K G +   E VY+EM+                           
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR-------------------------- 222

Query: 296 FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGL 355
                   R+  +NVV+++++I GL + GK  +A  + E ++    +    T+  +I+G 
Sbjct: 223 --------RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           CK G + KA  +L E+             +  R+       N  T N L++GF +   + 
Sbjct: 275 CKAGKMFKADALLKEM-------------VAKRIHP-----NEITFNILIDGFCRDENVT 316

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  +F+EM R+G  P VV+YN+LINGLC   +  EA     +M   G KP+++TY+ LI
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           NG C+ K +  A ++     ++G  P+V  +N LI     AG+++DA  L S M      
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           PN+ TYN L+ G  + G+  +A ++   +    L+ D+++YNI +  LC       A   
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 596 LNDALCRGILPTTITWHILVRAVMNNGAST 625
           L++    G+ P+ +T++ L+      G ST
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNST 526


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 241/507 (47%), Gaps = 31/507 (6%)

Query: 66  IQKCYCPEDVALS--VIQAYGKNSMPDKALDVFQRMNE-----IFGCEAGILCRKRQFEK 118
           ++   CP DVAL+  +++   +   P  A  V +          +   A   CR  + ++
Sbjct: 79  VESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAATAVTYSALADGYCRVGRLDE 138

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+R ++ +    + P  Y+Y  +++ L   G +  AL + D M  RG   +VV YNIL++
Sbjct: 139 ARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLE 195

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
              K   Y +A E+ + + +E    P  VTYNV+++G+C+ G  D   E+ + +      
Sbjct: 196 AACKGRGYRQAMELIDLMRVE-GCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCT 254

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            ++  Y + + GL  AG  E  E +  EM          T + +I   C+ G  +    L
Sbjct: 255 PNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRL 314

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            E M +  C  N+V+YN ++ GL E G VD A+ +   ++   C  +  T+ +L+ GLC 
Sbjct: 315 LEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCN 374

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                               R  DA  L+ +M +  C  +  T N+++    Q      A
Sbjct: 375 ------------------AERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + +FK+M  KGC P  V+Y+++I GL K  +  ++   + EM  KG+ P+ I Y LL   
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAEC 475

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           L +  K+  A+++  +    G +P   +YN ++ GLC  GK + A+ + SNM    C+P+
Sbjct: 476 LNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPD 535

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHI 564
             TY+ L+ GL   G   +A E+ + +
Sbjct: 536 ESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 246/523 (47%), Gaps = 39/523 (7%)

Query: 114 RQFEKAKRFLNSLWEKG-------------LKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           R+     R L+SL  +G               PDV     ++  L + G    A  V + 
Sbjct: 54  RRLHGEDRRLSSLVHRGELDAALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEA 113

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
               G     V Y+ L DG+ + G    A+    R+V    V P+   YN +++ LC  G
Sbjct: 114 C---GSAATAVTYSALADGYCRVGRLDEAR----RVVDGMPVLPSAYAYNPLMHALCVRG 166

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           +  + L + D M       D  TY   +   CK      A  +   M   G     VTYN
Sbjct: 167 QVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYN 226

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++DG CR G +    EL   +   GC  N V+YN +++GL   G+ ++   +   +  +
Sbjct: 227 VIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSE 286

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQIL---------------NEVEEG--GEGRLADA 382
           NC     T  V+I+ LC+ G   +AI++L               N V  G   +G +  A
Sbjct: 287 NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGA 346

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L++ M   GCK N +T N L+ G   A + E+A  L  +MS+  C P ++++NT+I  
Sbjct: 347 LYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGF 406

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+     +A    K+M EKG  P+ +TYS +I GL ++ K++ +L+L  +   KGF P+
Sbjct: 407 LCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  Y++L   L    K+ +A+Q+   ++     P  V YNT++ GL + G  D+A++I +
Sbjct: 467 IN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILS 525

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +++ +   PD  +Y+I ++GL     M +A E L+    R ++
Sbjct: 526 NMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVI 568



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 190/405 (46%), Gaps = 61/405 (15%)

Query: 247 FIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
            +  LC+ G    A RV    VE+ G    AVTY+A+ DG+CR G++ E   +  V G  
Sbjct: 94  LVRDLCRRGRPADAARV----VEACGSAATAVTYSALADGYCRVGRLDEARRV--VDGMP 147

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +  +YN L+  L   G+V +A+ + + +  + C  D  T+ +L+   CK     +A+
Sbjct: 148 VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAM 207

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           +                  L++ M   GC     T N +M+G  +   ++ A  L   + 
Sbjct: 208 E------------------LIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLP 249

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP------------------- 466
             GC+P  V+YNT++ GL    R+ +    + EM  +   P                   
Sbjct: 250 SYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQ 309

Query: 467 ----------------DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
                           +++TY+ +++GLC+   +D AL L       G  P++  YNIL+
Sbjct: 310 RAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILV 369

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
            GLC+A + EDA  L + M + +C+P+++T+NT++  L + G   +A+E++  + E+   
Sbjct: 370 KGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCC 429

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           P+ ++Y+  ++GL    +M  + E LN+   +G  P  I +H+L 
Sbjct: 430 PNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP-EINYHLLA 473



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 49/345 (14%)

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           +  L+  G++D A+ + E      C  D      L+  LC+ G    A +++        
Sbjct: 63  LSSLVHRGELDAALRVVE---SSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAAT 119

Query: 377 G----RLADAASLVNRMDK-----HGCKL--NAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                 LAD    V R+D+      G  +  +AY  N LM+      ++ +A+ L   M 
Sbjct: 120 AVTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNML 179

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            +GC+P VV+YN L+   CK   + +A   +  M  +G  P  +TY+++++G+C+   +D
Sbjct: 180 YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVD 239

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED------------------------ 521
            A +L       G TP+   YN ++ GL +AG+ ED                        
Sbjct: 240 YARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVI 299

Query: 522 -----------ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
                      A++L   M K +C  N+VTYN ++ GL + G  D AL + +++  +  +
Sbjct: 300 SSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCK 359

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           P+I +YNI +KGLC+  R  DA + +        LP  +T++ ++
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTII 404



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 2/178 (1%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F    G LC+K    +A      + EKG  P+  +Y +VI GL K+G +  +L + +EM 
Sbjct: 400 FNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMG 459

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
            +G    +  Y++L +   ++   + A ++  +L  +T + P  V YN ++ GLC+ G+ 
Sbjct: 460 SKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKL-QDTGISPQAVLYNTILLGLCRNGKT 517

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           D+ +++   M  +    D  TY   I GL   G ++ A  +   +    + VD +  N
Sbjct: 518 DQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 217/452 (48%), Gaps = 56/452 (12%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+V+    +I G     + ++ +++ + ++K+ +  D F Y + I G CKA  V+ A +V
Sbjct: 110 PDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADRVDHASKV 168

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              M + G   D VTYN +I  FC  G++     + + + +  C   V++Y ILI   + 
Sbjct: 169 LDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATIT 228

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            G +DEA+ + + +  +    D  T+ V++NG+CK G L++A + L+             
Sbjct: 229 QGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLS------------- 275

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                R+ K+GC     T N L+   +   K E    L  +M  KGC P  ++Y+TLI  
Sbjct: 276 -----RISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA 330

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC+  +  EA + +K M EK   PD  +Y  LI+ LC+  K+D+A++     +  G  PD
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD 390

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD--------- 553
           +  YN ++  LC  G  ++AL ++  + +  C PN  +YNTL   L+ +GD         
Sbjct: 391 ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMIL 450

Query: 554 --------------------------CDKALEIWNHILE-ERLRPDIISYNITLKGLCSC 586
                                      D+A+E+   + E E+ +P +ISYN  L GLC  
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            R+ DA E L   +  G LP   T+ +L++ +
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 232/464 (50%), Gaps = 30/464 (6%)

Query: 109 ILCRK--------RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           ILC K        ++ EKA + +  L + G KPDV++Y  VI+G  K+  +  A  V D 
Sbjct: 113 ILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDR 171

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M +RG E +VV YNILI  F  +G    A  + ++L ++ +  P V+TY ++I      G
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL-LKDNCKPTVITYTILIEATITQG 230

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             DE +++ D M       D +TY   ++G+CK G ++ A      + ++G      TYN
Sbjct: 231 GIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYN 290

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++      GK +   +L   M  KGC  N ++Y+ LI  L  +GK+DEA ++ ++++EK
Sbjct: 291 ILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEK 350

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               D  ++  LI+ LC+ G ++ AI+ L+++  GG   L D  S               
Sbjct: 351 ALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG--HLPDILSY-------------- 394

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             NS++    +    + A+ +F+++   GC P   SYNTL   L        A   + EM
Sbjct: 395 --NSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEM 452

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ-FLQKGFTPDVTMYNILIHGLCSAGK 518
           L  G  PD ITY+ LI+ LC+   +D A++L    F  +   P V  YN ++ GLC   +
Sbjct: 453 LSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQR 512

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           + DA+++ + M    C+PN  TY  L+ G+   G    A+E+ N
Sbjct: 513 IIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELAN 556



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 219/494 (44%), Gaps = 57/494 (11%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
            +N   KS     +L     M  RG + +V+    LI GFF      +A ++ E  ++E 
Sbjct: 83  TLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME--ILEK 140

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              P+V  YN +I+G CK  R D   ++ DRMKK   E D  TY   I   C  G ++ A
Sbjct: 141 HGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 261 ERV-----------------------------------YREMVESGIFVDAVTYNAMIDG 285
            RV                                     EM+  G+  D  TYN +++G
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G +   FE    + + GC+  V +YNIL+R LL  GK +    +   +  K C  +
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LI  LC++G +++A  +L  ++E                       + Y+ + L
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKE------------------KALAPDGYSYDPL 362

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++   +  K++ AI    +M   G  P ++SYN+++  LCK     EA +  +++ E G 
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+  +Y+ L   L  S     AL +  + L  G  PD   YN LI  LC  G V+ A++
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 525 LYSNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           L  +M +   C P +++YNT++ GL K      A+E+   ++ E   P+  +Y + ++G+
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542

Query: 584 CSCSRMSDAFEFLN 597
                  DA E  N
Sbjct: 543 GFAGWRYDAMELAN 556



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 232/494 (46%), Gaps = 34/494 (6%)

Query: 34  YAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKAL 93
           Y  S +   H++ R   P +++    I     ++K     + A+ V++   K+  PD   
Sbjct: 93  YDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKI----EKAIQVMEILEKHGKPD--- 145

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
            VF     I G      C+  + + A + L+ + ++G +PDV +Y  +I      G L  
Sbjct: 146 -VFAYNAVISG-----FCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           AL V D++ +   +  V+ Y ILI+    +G    A ++ + + +   + P+  TYNV++
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM-LSRGLRPDRYTYNVVV 258

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           NG+CK G  D   E   R+ KN       TY   +  L   G  E  E++  +M+  G  
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCE 318

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISI 332
            + +TY+ +I   CR GKI E   + +VM  K    +  SY+ LI  L   GKVD AI  
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF 378

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            + +       D  ++  ++  LCKNG  ++A+ I  ++ E                   
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE------------------V 420

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GC  NA + N+L      +     A+ +  EM   G  P  ++YN+LI+ LC+     +A
Sbjct: 421 GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480

Query: 453 YSFVKEMLE-KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
              + +M E +  +P +I+Y+ ++ GLC+ ++I  A+++    + +G  P+ T Y +LI 
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540

Query: 512 GLCSAGKVEDALQL 525
           G+  AG   DA++L
Sbjct: 541 GIGFAGWRYDAMEL 554



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 197/411 (47%), Gaps = 20/411 (4%)

Query: 213 INGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGI 272
           +N  CK  ++DE L     M     + D       I G      +E A +V  E++E   
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHG 142

Query: 273 FVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAIS 331
             D   YNA+I GFC+A ++    ++ + M ++G   +VV+YNILI      G++D A+ 
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 332 IWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           + + L + NC     T+ +LI      G +++A+++L+E                  M  
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDE------------------MLS 244

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G + + YT N ++NG  +   L+ A      +S+ GC   V +YN L+  L    ++  
Sbjct: 245 RGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEY 304

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               + +ML KG +P+ ITYS LI  LC+  KID A  +     +K   PD   Y+ LI 
Sbjct: 305 GEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLIS 364

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  GKV+ A++   +M     +P++++YN+++  L K G+ D+AL I+  + E    P
Sbjct: 365 ALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPP 424

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  SYN     L S      A   + + L  GI P  IT++ L+  +  +G
Sbjct: 425 NAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           N +  C    LCR    ++A   L  ++E +  +P V SY TV+ GL K   ++ A+ V 
Sbjct: 465 NSLISC----LCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVL 520

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
             M   G   N   Y +LI G    G    A E+   LV
Sbjct: 521 AAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 275/590 (46%), Gaps = 30/590 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y+H P +++ +L  L   KL     R+L L+  +   
Sbjct: 169 VLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIE 228

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAG---------ILCRKRQFEKAKR 121
              +    V+ +Y +      AL V   M +  G E           +L +  + EKA R
Sbjct: 229 LSPEAFGCVMVSYSRAGKLRNALRVLTLMQKA-GVEPNLSICNTTIYVLVKGCKLEKALR 287

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL  +   G+KPD+ +Y ++I G      +  AL +   +  +G   + V Y  ++    
Sbjct: 288 FLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLC 347

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+    + K + E++V ++++ P+ VTYN +I+ L K G  D+ L      +      D 
Sbjct: 348 KEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDK 407

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + +H  C+ G ++ A+ +  +M       D VTY A++DGFCR G+I E  ++ + 
Sbjct: 408 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQ 467

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + GC  N VSY  L+ GL  +GK  EA  +  +  E     ++ T+GV+++G  + G 
Sbjct: 468 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGK 527

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           L++A  +  E+ E G                   ++ +A   +      GC +N     +
Sbjct: 528 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 587

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++GF Q   +E A+ + ++M      P  V+Y  L + L K  R  EA   + +ML KG
Sbjct: 588 VIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 647

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P  +T+  +I+  CQ  ++D  L L  + +++   P  T+YN +I  LC  G +E+A 
Sbjct: 648 LDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAE 705

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           +L   + +     +  T + LM+   K G    A ++   +    L PD+
Sbjct: 706 KLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDL 755



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 242/508 (47%), Gaps = 22/508 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L + +  + A+R L  +  +G++    ++G V+    ++G L  AL V   M + GVE 
Sbjct: 205 VLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEP 264

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           N+   N  I    K     +A    ER+ + T + P++VTYN +I G C   R ++ LE+
Sbjct: 265 NLSICNTTIYVLVKGCKLEKALRFLERMQV-TGIKPDIVTYNSLIKGYCDLNRIEDALEL 323

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDGFC 287
              +       D  +Y + +  LCK   +E  + +  +MV+ S +  D VTYN +I    
Sbjct: 324 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLS 383

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           + G   +     +    KG  ++ V Y+ ++    + G++DEA S+   +  ++CN D  
Sbjct: 384 KHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVV 443

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  +++G C+                   GR+ +A  ++ +M KHGCK N  +  +L+N
Sbjct: 444 TYTAIVDGFCR------------------LGRIDEAKKMLQQMYKHGCKPNTVSYTALLN 485

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G   + K   A  +         +P  ++Y  +++G  +  +  EA    +EM+EKG+ P
Sbjct: 486 GLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
             +  +LLI  LCQ++K+  A K   + L KG   +V  +  +IHG C  G +E AL + 
Sbjct: 546 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 605

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
            +M   N  P+ VTY  L D L K G  D+A E+   +L + L P  +++   +   C  
Sbjct: 606 EDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQW 665

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHIL 614
            R+ D    L+  + R     TI  H++
Sbjct: 666 GRVDDMLNLLDRMVKRKPF-RTIYNHVI 692



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 228/508 (44%), Gaps = 57/508 (11%)

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
           W     P VY   T+++ L K+    GA  V   M  RG+E +   +  ++  + + G  
Sbjct: 190 WRYSHHPLVYY--TLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKL 247

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  +   L+ +  V PN+   N  I                                 
Sbjct: 248 RNALRVLT-LMQKAGVEPNLSICNTTI--------------------------------- 273

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
             + L K   +E A R    M  +GI  D VTYN++I G+C   +I++  EL   +  KG
Sbjct: 274 --YVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKG 331

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           C  + VSY  ++  L +  K+++   + E ++++ N   D  T+  LI+ L K+G+ + A
Sbjct: 332 CPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDA 391

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  L E E+ G                 +GR+ +A SLV  M    C  +  T  ++++G
Sbjct: 392 LAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDG 451

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +  +++ A  + ++M + GC P  VSY  L+NGLC   +  EA   +    E  W P+
Sbjct: 452 FCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 511

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            ITY ++++G  +  K+  A  L  + ++KGF P     N+LI  LC   KV +A +   
Sbjct: 512 AITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 571

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
               + C  N+V + T++ G  + GD + AL +   +      PD ++Y      L    
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R+ +A E +   L +G+ PT +T+  ++
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVI 659



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 181/382 (47%), Gaps = 20/382 (5%)

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + +  L K    +GA RV R M   GI +    +  ++  + RAGK++    +  +
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M + G   N+   N  I  L++  K+++A+   E ++      D  T+  LI G C    
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCD--- 313

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                  LN +E        DA  L+  +   GC  +  +  ++M    +  K+E    L
Sbjct: 314 -------LNRIE--------DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCL 358

Query: 421 FKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
            ++M +     P  V+YNTLI+ L K     +A +F+KE  +KG+  D + YS +++  C
Sbjct: 359 MEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFC 418

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           Q  ++D A  L      +   PDV  Y  ++ G C  G++++A ++   M K  C PN V
Sbjct: 419 QKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTV 478

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           +Y  L++GL  +G   +A E+ N   E    P+ I+Y + + G     ++S+A +   + 
Sbjct: 479 SYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREM 538

Query: 600 LCRGILPTTITWHILVRAVMNN 621
           + +G  PT +  ++L++++  N
Sbjct: 539 VEKGFFPTPVEINLLIQSLCQN 560


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 243/495 (49%), Gaps = 32/495 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R+ + ++A R + S      +PD  +   +I  L  SG    A  V           +
Sbjct: 77  LVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 127

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN ++ G+   G    A+    R   E +V  +  T + +I GLC  GR    L + 
Sbjct: 128 VMAYNAMMAGYCGAGQVDAAR----RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     D  TY   +   CK    + A ++  EM + G   D VTYN +++G C+ 
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  E  + +   GC  N VSYNI+++GL    + ++A  +   + +K C  +  T 
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+ LC+ G +  A+++L ++                   K+GC  N+ + N L++ F
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIP------------------KYGCSPNSLSYNPLLHAF 345

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K++ A+     M  +GC P +VSYNTL+  LC+      A   + ++ +KG  P +
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I+Y+ +I+GL ++ K   AL+L  + + KG  PD+  Y+ +  GLC   ++EDA++ +  
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++     PN V YN ++ GL K  +   A++++ +++     P+  +Y I ++GL     
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525

Query: 589 MSDAFEFLNDALCRG 603
           + +A + L++   RG
Sbjct: 526 IKEARDLLDELCSRG 540



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 220/431 (51%), Gaps = 28/431 (6%)

Query: 187 MRAKEIWERL-VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
           +R  E+ E L ++ ++  P+  T   +I  L   GR  E   +           D   Y 
Sbjct: 78  VRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGP-----DVMAYN 132

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + + G C AG V+ A R      E  +  DA T + +I G C  G+      + + M R+
Sbjct: 133 AMMAGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR 189

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
            C+ +VV+Y IL+    +     +A+ + + +R+K C  D  T+ V++NG+C+       
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ------- 242

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
                      EGR+ DA   +  +  +GC+ N  + N ++ G   A + E+A  L  EM
Sbjct: 243 -----------EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
            +KGC P VV++N LI+ LC+      A   ++++ + G  P+ ++Y+ L++  C+ KK+
Sbjct: 292 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D A+      + +G  PD+  YN L+  LC +G+V+ A++L   +K + C P L++YNT+
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL K G   +ALE+ N ++ + L+PDII+Y+    GLC   R+ DA          GI
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471

Query: 605 LPTTITWHILV 615
            P T+ ++ ++
Sbjct: 472 RPNTVLYNAII 482



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 185/377 (49%), Gaps = 29/377 (7%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +  L + G ++ A R    +V S    DA T  A+I     +G+  E   +    G    
Sbjct: 74  LRSLVRRGELDEALR----LVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGP--- 126

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V++YN ++ G    G+VD A   W    E+    D+ T   LI GLC           
Sbjct: 127 -DVMAYNAMMAGYCGAGQVDAARR-W--CAERAVERDAYTCDTLIRGLC----------- 171

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                  G GR A+A ++++ M +  C  +  T   L+    + S  + A+ L  EM  K
Sbjct: 172 -------GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           GC+P +V+YN ++NG+C+  R  +A  F+K +   G +P+ ++Y++++ GLC +++ + A
Sbjct: 225 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 284

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  +  QKG  P+V  +N+LI  LC  G VE AL++   + K  C PN ++YN L+  
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K    DKA+   + ++     PDI+SYN  L  LC    +  A E L+    +G  P 
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404

Query: 608 TITWHILVRAVMNNGAS 624
            I+++ ++  +   G +
Sbjct: 405 LISYNTVIDGLTKAGKT 421



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 31/407 (7%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHV---- 57
           V +A+R       E++ +T   L          A++  +   +LRR   P +V +     
Sbjct: 144 VDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLE 203

Query: 58  --------SRILELI-EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEIFGCE 106
                    + ++L+ E++   C  D+     V+    +    D A++  + +   +GCE
Sbjct: 204 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS-YGCE 262

Query: 107 AGI---------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV 157
                       LC   ++E A+  +  + +KG  P+V ++  +I+ L + G +  AL V
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 322

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
            +++ + G   N + YN L+  F K+    +A    + L++    YP++V+YN ++  LC
Sbjct: 323 LEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD-LMVSRGCYPDIVSYNTLLTALC 381

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
           + G  D  +E+  ++K         +Y + I GL KAG  + A  +  EMV  G+  D +
Sbjct: 382 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 441

Query: 278 TYNAMIDGFCRAGKIKECFELW---EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWE 334
           TY+ +  G CR  +I++    +   + MG +   N V YN +I GL +  +   AI ++ 
Sbjct: 442 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP--NTVLYNAIILGLCKRRETHSAIDLFA 499

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +    C  + +T+ +LI GL   G + +A  +L+E+   GE  L D
Sbjct: 500 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLD 546


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 241/500 (48%), Gaps = 22/500 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  KA   L  +    L PDV+SY TVI G  +  +L  AL + +EM   G   +
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V + ILID F K G    A    + +     +  ++V Y  +I G C CG  D    ++
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D + +      + TY + I G CK G ++ A  ++  M+E G+  +  TY  +IDG C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE  +L  +M  K    N V+YNI+I  L ++G V +A+ I EL++++    D+ T+
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM--DKHGCKLNAYTCNSLMN 406
            +L+ GLC                   +G L +A+ L+  M  D      +  + N+L++
Sbjct: 391 NILLGGLC------------------AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  + ++L  A+ ++  +  K  +   V+ N L+N   K     +A    K++ +     
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +  TY+ +I+G C++  +++A  L C+       P V  YN L+  LC  G ++ A +L+
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M++ N  P++V++N ++DG  K GD   A  +   +    L PD+ +Y+  +      
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612

Query: 587 SRMSDAFEFLNDALCRGILP 606
             + +A  F +  +  G  P
Sbjct: 613 GYLDEAISFFDKMVDSGFEP 632



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 32/507 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEA-----GIL----CRKRQFEKAKRFLNSLWE 128
           +VI+ + +    +KAL++   M    GC       GIL    C+  + ++A  FL  +  
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GL+ D+  Y ++I G    G+L    A+FDE+ ERG     + YN LI GF K G    
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E  ++E  V PNV TY  +I+GLC  G+  E L++ + M + + E ++ TY   I
Sbjct: 301 ASEIFE-FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           + LCK G V  A  +   M +     D +TYN ++ G C  G + E  +L  +M +    
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 309 ---NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +V+SYN LI GL +  ++ +A+ I++LL EK    D  T  +L+N   K G +NKA+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++  ++ +    R                  N+ T  ++++GF +   L  A  L  +M 
Sbjct: 480 ELWKQISDSKIVR------------------NSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
                P+V  YN L++ LCK     +A+   +EM      PD+++++++I+G  ++  I 
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L     + G +PD+  Y+ LI+     G +++A+  +  M      P+    ++++
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPD 572
                 G+ DK  E+   ++++ +  D
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIVLD 668



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 237/492 (48%), Gaps = 22/492 (4%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            ++   ++  LV+S +   A + + +M E     N V  + L++ + +      A  +  
Sbjct: 72  AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            L+++     NV  +N+++ GLC+     + + +   M++N    D F+Y + I G C+ 
Sbjct: 132 -LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             +E A  +  EM  SG     VT+  +ID FC+AGK+ E     + M   G   ++V Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LIRG  + G++D   ++++ + E+  +  + T+  LI G CK                
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---------------- 294

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G+L +A+ +   M + G + N YT   L++G     K + A+ L   M  K   P  
Sbjct: 295 --LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YN +IN LCK     +A   V+ M ++  +PD ITY++L+ GLC    +D A KL   
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 494 FLQ-KGFT-PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            L+   +T PDV  YN LIHGLC   ++  AL +Y  + ++    + VT N L++   K 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           GD +KA+E+W  I + ++  +  +Y   + G C    ++ A   L       + P+   +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 612 HILVRAVMNNGA 623
           + L+ ++   G+
Sbjct: 533 NCLLSSLCKEGS 544



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 22/378 (5%)

Query: 248 IHGLCKAGN--VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           +  LC+  N  ++ A  V+++ V+SG  + A   N ++    R+   +  F  +  M   
Sbjct: 43  LRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLET 101

Query: 306 GC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
              +N VS + L+   ++  K   A  +  L+ ++    +   H +L+ GLC+N    KA
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           + +L E                  M ++    + ++ N+++ GF +  +LE A+ L  EM
Sbjct: 162 VSLLRE------------------MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
              GCS ++V++  LI+  CK  +  EA  F+KEM   G + D++ Y+ LI G C   ++
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D    L  + L++G +P    YN LI G C  G++++A +++  M +R   PN+ TY  L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +DGL   G   +AL++ N ++E+   P+ ++YNI +  LC    ++DA E +     R  
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 605 LPTTITWHILVRAVMNNG 622
            P  IT++IL+  +   G
Sbjct: 384 RPDNITYNILLGGLCAKG 401


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 220/411 (53%), Gaps = 23/411 (5%)

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           VK+G++  AL  FD   + G   + +  N ++    K+G     + +++ ++    +  N
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI-RRRIGVN 228

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VVT++V+INGLCK G+F +  ++ + MK         TY + I G CKAG +  A+ + +
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
           EMV   I  + +T+N +IDGFCR   +    +++E M R+G   NVV+YN LI GL  NG
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
           K+DEA+ + + +       +  T+  LING CK   L +A ++L+++             
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI------------- 395

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
                 K G   N  T N+L++ + +A ++++A  L   M   G  P V +YN LI G C
Sbjct: 396 -----GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL---QKGFTP 501
           +     EA    KEM   G K D++TY++L++ LC+  +   A++L  +     +KG   
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRA 510

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           ++  YN+LI G C+ GK+E+A +L + M ++  +PN  TY+ L D + + G
Sbjct: 511 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 233/451 (51%), Gaps = 22/451 (4%)

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           L+D F K   Y  +       V+ +    N +  ++++    K G  D  LE +DR    
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
                + +    +  L K G +   E VY+EM+   I V+ VT++ +I+G C+ GK ++ 
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 296 FELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++ E M   G   +V++YN +I G  + GK+ +A ++ + +  K  + +  T  +LI+G
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
            C++  +  A ++  E                  M + G + N  T NSL+NG     KL
Sbjct: 309 FCRDENVTAAKKVFEE------------------MQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + A+ L  +MS  G  P VV+YN LING CK +   EA   + ++ ++G  P++IT++ L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           I+   ++ ++D A  L    L  G  P+V+ YN LI G C  G V++A +L   M+    
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNH--ILEER-LRPDIISYNITLKGLCSCSRMSD 591
             +LVTYN L+D L K G+  KA+ + +   ++E++  R +I++YN+ +KG C+  ++ +
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           A   LN+ L +G++P   T+ IL   +M  G
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 249/534 (46%), Gaps = 66/534 (12%)

Query: 8   LLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQ 67
           L +L  +E  P   L  F    +E G  H+   F  +L  L + K    +  +L+     
Sbjct: 77  LQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKN 136

Query: 68  KCYCPEDV--ALSVIQAYG---------------KNSMPDKALDVFQRMNE------IFG 104
             Y    +  +LSV+ ++G               KN   D AL+ F R  +         
Sbjct: 137 AHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS 196

Query: 105 CEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           C   +  L ++ +    +     +  + +  +V ++  VINGL K G    A  V ++M 
Sbjct: 197 CNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
             G   +V+ YN +IDG+ K G   +A  + + +V +  ++PN +T+N++I+G C+    
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENV 315

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
               ++++ M++   + +  TY S I+GLC  G ++ A  +  +M   G+  + VTYNA+
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 283 IDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+GFC+   +KE  E+ + +G++G   NV+++N LI    + G++D+A  +  ++ +   
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             + +T+  LI G C+                  EG + +A  L   M+ +G K +  T 
Sbjct: 436 CPNVSTYNCLIVGFCR------------------EGNVKEARKLAKEMEGNGLKADLVTY 477

Query: 402 NSLMNGFIQASKLENAIFLFKEMS---RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           N L++   +  +   A+ L  EM+   +KG    +V+YN LI G C   +  EA   + E
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 537

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT--MYNILI 510
           MLEKG  P+  TY +L +                + ++KGF PD+   +YN+ I
Sbjct: 538 MLEKGLIPNRTTYDILRD----------------EMMEKGFIPDIDGHLYNVSI 575



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 26/386 (6%)

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN---AMIDGFCRAGK 291
           N   +     C F     + G +   E+  R +    +  +A  YN   A++D F +   
Sbjct: 82  NSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLL---HLLANAKNYNKIRALLDSFAKNAH 138

Query: 292 IKEC--FELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 F    V+G  GC N +  ++L+   ++NG++D A+  ++          +  +G
Sbjct: 139 YSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFD---------RAGDYG 189

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             ++ L  N  L   ++         EGR+    S+   M +    +N  T + ++NG  
Sbjct: 190 FRLSALSCNPMLVSLVK---------EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLC 240

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K + A  + ++M   G SP+V++YNT+I+G CK  +  +A + +KEM+ K   P+ I
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T+++LI+G C+ + +  A K+  +  ++G  P+V  YN LI+GLCS GK+++AL L   M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                 PN+VTYN L++G  K     +A E+ + I +  L P++I++N  +       RM
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            DAF   +  L  G+ P   T++ L+
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLI 446



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 180/352 (51%), Gaps = 19/352 (5%)

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
            +++  + ++  + + G++    E ++  G  G  L+ +S N ++  L++ G++    S+
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +  +    +  T  V+INGLCK G   KA                    +V  M   
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA------------------GDVVEDMKAW 258

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   +  T N++++G+ +A K+  A  L KEM  K   P  +++N LI+G C+ E    A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               +EM  +G +P+++TY+ LINGLC + K+D AL L  +    G  P+V  YN LI+G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C    +++A ++  ++ KR   PN++T+NTL+D   K G  D A  + + +L+  + P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           + +YN  + G C    + +A +   +    G+    +T++ILV A+   G +
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 175/671 (26%), Positives = 304/671 (45%), Gaps = 88/671 (13%)

Query: 16  KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCP--E 73
           K+P  AL +        G   S   FH ++        +     +LEL+   K   P   
Sbjct: 28  KDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGN 87

Query: 74  DVALSVIQAYGKNSMPDKALDVFQ--------RMNEIFGCEA--GILCRKRQFEKAKRFL 123
            V+ SVI  + K S P  A+  F+        R N I  C A  G L +  +  +    +
Sbjct: 88  FVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPN-IATCTALLGALFQLGRVREVSDLV 146

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           + +  +    DV  Y + I G  + G L+ A+    EM E+G+  + V Y ILIDGF ++
Sbjct: 147 SWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSRE 206

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
           G   +A    E++  +  + PN+VTY  ++ G CK G+ DE   ++  ++    E D F 
Sbjct: 207 GYVEKAIGFLEKM-KKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFM 265

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL----- 298
           Y + I G C  G+++    +  +M + GI    VTYN++I+G C+AG+  E  E+     
Sbjct: 266 YVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEVSKGIA 325

Query: 299 -------------WEVMGRKG-------------CLNVVSYNILIRGLLENGKVDEAISI 332
                         E    KG             C+++V  N +I+ LL  G +++A + 
Sbjct: 326 GDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAF 385

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-------------VEEG----- 374
           ++ +   +  ADS T+  +ING C+   + +A++I +E             V+EG     
Sbjct: 386 YKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGC 445

Query: 375 -------------------------GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
                                      GR+ DA  LV   +++   ++    + +++   
Sbjct: 446 MRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLC 505

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L+ A+ L   + +KG +  + +YN++INGLC+     +A+     + +    P  I
Sbjct: 506 KEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEI 565

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TY+ LI+ LC+   +  A +L  + + KGF P+V +YN LI G C  G +E+AL L  ++
Sbjct: 566 TYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDL 625

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           K R   P+  T + L++G    GD + AL  +    ++ + PD + +   ++GLC+  RM
Sbjct: 626 KARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRM 685

Query: 590 SDAFEFLNDAL 600
            +A   L + L
Sbjct: 686 EEARGILREML 696



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 234/519 (45%), Gaps = 86/519 (16%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R+   EKA  FL  + + GLKP++ +Y  ++ G  K G L  A  +F  +   G+E +  
Sbjct: 205 REGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEF 264

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y  LIDGF  +GD      + E +  +  + P++VTYN +INGLCK GR  E  E+   
Sbjct: 265 MYVTLIDGFCTRGDIDCVFGLLEDM-EKRGISPSIVTYNSIINGLCKAGRTSEADEVSKG 323

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD---------------- 275
           +       D+ T+ + +HG  +  NV+G     R + E G+ +D                
Sbjct: 324 IAG-----DAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGA 378

Query: 276 -------------------AVTYNAMIDGFCRAGKIKECFELWEVMGR------------ 304
                              +VTY  MI+G+CR  +I+E  E+++   +            
Sbjct: 379 LEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQ 438

Query: 305 ----KGCLNVVSYN-----------ILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                GC+  +  N            +++ L +NG++ +A  +     E     D   + 
Sbjct: 439 EGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYS 498

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           ++I+ LCK G+L+KA+ +   V+                  K G  LN Y  NS++NG  
Sbjct: 499 IMIDVLCKEGHLDKALDLCAFVK------------------KKGIALNIYAYNSVINGLC 540

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   L  A  LF  + +    P+ ++Y TLI+ LCK     +A    ++M+ KG+ P++ 
Sbjct: 541 RQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVR 600

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI+G C+   ++ AL L      +   PD    + LI+G C  G +E AL  +   
Sbjct: 601 VYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEF 660

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           KK++ +P+ + +  L+ GL   G  ++A  I   +L+ R
Sbjct: 661 KKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTR 699



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 258/558 (46%), Gaps = 44/558 (7%)

Query: 108 GILCRKRQFEKAKRFLNS-LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           G+  + +  EKA   L   L   G+ P  +++ ++I+     G +  A+ V + M    V
Sbjct: 22  GLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKV 81

Query: 167 E---TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
                N V  ++ I GF K      A   +E  V    + PN+ T   ++  L + GR  
Sbjct: 82  RYPFGNFVSSSV-ISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVR 140

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
           E  ++   M++ E   D   Y S+I G  + G +  A R ++EM+E GI  D V+Y  +I
Sbjct: 141 EVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILI 200

Query: 284 DGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DGF R G +++     E M + G   N+V+Y  ++ G  + GK+DEA ++++++      
Sbjct: 201 DGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIE 260

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDK---------- 391
            D   +  LI+G C  G ++    +L ++E+ G    +    S++N + K          
Sbjct: 261 VDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV 320

Query: 392 -HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   +A T ++L++G+I+   ++  +   + +   G    +V  NT+I  L  V    
Sbjct: 321 SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALE 380

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ------------FLQKG 498
           +AY+F K M       D +TY  +ING C+  +I+ AL++  +            F+Q+G
Sbjct: 381 DAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEG 440

Query: 499 FTP--------------DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           F P               V     ++  L   G++ DA +L    ++   V +LV Y+ +
Sbjct: 441 FFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIM 500

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +D L K G  DKAL++   + ++ +  +I +YN  + GLC    +  AF   +      +
Sbjct: 501 IDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDL 560

Query: 605 LPTTITWHILVRAVMNNG 622
           +P+ IT+  L+ ++   G
Sbjct: 561 VPSEITYATLIDSLCKEG 578



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 162/343 (47%), Gaps = 29/343 (8%)

Query: 246 SFIHGLC-KAGNVEGAERVYRE-MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           S I GLC K  + E A  + ++ +   GI   + T++++I  F   GK+    E+ E+M 
Sbjct: 18  SLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMT 77

Query: 304 ----RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
               R    N VS ++ I G  +  K   A+  +E         ++    VL   +    
Sbjct: 78  HDKVRYPFGNFVSSSV-ISGFCKISKPQLAVGFFE---------NAVNSRVLRPNIATCT 127

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            L  A+  L        GR+ + + LV+ M++     +    +S + G+ +   L  AI 
Sbjct: 128 ALLGALFQL--------GRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIR 179

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
             KEM  KG +P  VSY  LI+G  +     +A  F+++M + G KP+++TY+ ++ G C
Sbjct: 180 KHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFC 239

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +  K+D A  L       G   D  MY  LI G C+ G ++    L  +M+KR   P++V
Sbjct: 240 KKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIV 299

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           TYN++++GL K G   +A E+   I       D ++++  L G
Sbjct: 300 TYNSIINGLCKAGRTSEADEVSKGI-----AGDAVTFSTLLHG 337



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 135/263 (51%), Gaps = 25/263 (9%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +LC++   +KA      + +KG+  ++Y+Y +VINGL + G L+ A  +FD + +  +  
Sbjct: 503 VLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVP 562

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           + + Y  LID   K+G  + AK+++E++V++    PNV  YN +I+G CK G  +E L +
Sbjct: 563 SEITYATLIDSLCKEGCLLDAKQLFEKMVIK-GFNPNVRVYNSLIDGYCKFGNMEEALNL 621

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              +K    + D FT  + I+G C  G++EGA   + E  +  I  D + +  ++ G C 
Sbjct: 622 LIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCA 681

Query: 289 AGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            G+++E                       RG+L   ++ +  S+ EL+   +   ++ + 
Sbjct: 682 KGRMEEA----------------------RGILR--EMLQTRSVLELINRVDTEIETESV 717

Query: 349 GVLINGLCKNGYLNKAIQILNEV 371
              I  LC+ G + +A+ +LNEV
Sbjct: 718 ESFIISLCEQGSIQEAVTVLNEV 740



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 19/316 (6%)

Query: 313 YNILIRGLLENGKVDEA--ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           ++ LIRGL    K  E   + + + L        S T   LI+     G +++AI++L  
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGC 429
           +                  DK       +  +S+++GF + SK + A+  F+  ++ +  
Sbjct: 76  MTH----------------DKVRYPFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVL 119

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P + +   L+  L ++ R  E    V  M  + +  D++ YS  I G  +   +  A++
Sbjct: 120 RPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIR 179

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
              + ++KG  PD   Y ILI G    G VE A+     MKK    PNLVTY  +M G  
Sbjct: 180 KHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFC 239

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G  D+A  ++  +    +  D   Y   + G C+   +   F  L D   RGI P+ +
Sbjct: 240 KKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIV 299

Query: 610 TWHILVRAVMNNGAST 625
           T++ ++  +   G ++
Sbjct: 300 TYNSIINGLCKAGRTS 315



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 34/192 (17%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+    E+A   L  L  + +KPD ++   +ING    GD+ GAL  F E  ++ +  + 
Sbjct: 610 CKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDF 669

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-------PNVVTYNV--MINGLCKCGR 221
           + +  L+ G   KG    A+ I   ++   SV          + T +V   I  LC+ G 
Sbjct: 670 LGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGS 729

Query: 222 FDECLEMWD-----------------RMKKNE--------REKDSFTYCSFIHGLCKAGN 256
             E + + +                 R +K E        R  D  +Y S I  LC  G 
Sbjct: 730 IQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGKGSRVPDFESYYSLIASLCSRGE 789

Query: 257 VEGAERVYREMV 268
           +  A R  R+M+
Sbjct: 790 LLEANRKTRQML 801


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 249/500 (49%), Gaps = 45/500 (9%)

Query: 96  FQRMN----EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           FQ +N    +I+      + +  +      F   L +K   P ++ +G ++  LVK    
Sbjct: 17  FQTLNSSFQQIYTLNYITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCY 76

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT--- 208
             A+++  +M  +G+ +N+V  NILI+ F + G    +  ++   +++    PNV+T   
Sbjct: 77  HTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFAN-ILKKGYDPNVITLTT 135

Query: 209 ----------YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
                     Y  +INGLCK G+    L++  R+     + +   Y + I  +CK   V 
Sbjct: 136 LIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A  +Y EMV  GI  D VTY+A+I GF   GK+K+  +L+  M  +    +V ++NIL+
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G  ++GK+ E  +++ ++ ++    +  T+  L++G C    +NKA  I N + +GG  
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG-- 313

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                   VN         +  + N ++NGF +  K++ A+ LFK+M  K   P VV+Y 
Sbjct: 314 --------VNP--------DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ---- 493
           +LI+GLCK  +   A   V EM ++G  PD+ITYS +++ LC++ ++D A+ L  +    
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417

Query: 494 ----FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                  KG+  DV  Y ++I G C  G   +AL L S M+    +P+  TY  ++  LF
Sbjct: 418 VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLF 477

Query: 550 KTGDCDKALEIWNHILEERL 569
           K  + D A ++   ++   L
Sbjct: 478 KKDENDMAEKLLREMIARGL 497



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 7/295 (2%)

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL-NEVEEGGEGRLADAASLVN 387
           AIS+   +  K   ++  T  +LIN   + G    +  +  N +++G +  +    +L+ 
Sbjct: 79  AISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLI- 137

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
              K  C   +Y   +L+NG  +  +   A+ L + +  K   P VV YNT+I+ +CKV+
Sbjct: 138 ---KGLCLKVSY--GTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 192

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
              EA+    EM+ +G  PD++TYS LI+G     K+  A+ L  + + +   PDV  +N
Sbjct: 193 LVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 252

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           IL+ G C  GK+++   +++ M K+   PN+VTY +LMDG       +KA  I+N + + 
Sbjct: 253 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG 312

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + PD  SYNI + G C   ++ +A        C+ I+P  +T+  L+  +  +G
Sbjct: 313 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 48/170 (28%)

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN------------- 542
           QK  TP +  +  ++  L        A+ L+  M+ +    NLVT N             
Sbjct: 53  QKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNP 112

Query: 543 -----------------------------------TLMDGLFKTGDCDKALEIWNHILEE 567
                                              TL++GL K G    AL++   +  +
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++P+++ YN  +  +C    +++AF+  ++ +  GI P  +T+  L+  
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISG 222


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 254/502 (50%), Gaps = 27/502 (5%)

Query: 92  ALDVFQRMNEIFGCEAGI--------LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           A+ VF+   E+  C   +        LC+  +  +A   L  + ++G  PDV SYG V++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G  + G+L   L + DE+  +G++ +   YN +I    K G+ + A+++  R + +  V+
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLL-RGMRKWGVF 344

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P+ V Y  +I+G CK G      +++D M++ +   D  TY S IHG+CK+G +  A  +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           + EM+  G+  D VTY A+IDG+C+AG++KE F +   M +KG   NVV+Y  L  GL +
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
           NG++D A  +   +  K    +  T+  ++NGLCK G + + ++++ E++  G       
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G +A A  L+  M     +    T N LMNGF  +  LE+   L + M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG  P   ++N+L+   C            K M ++G  PD  TY++LI G C+++ + 
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L  + ++KG++     Y+ LI G     K  +A +L+  M+K   V     Y+  +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 546 DGLFKTGDCDKALEIWNHILEE 567
           D  ++ G+ +  LE+ +  + E
Sbjct: 705 DVNYEEGNWEITLELCDEFMTE 726



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 242/465 (52%), Gaps = 20/465 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+ VF+E  E GV  N V  NI++    + G    A  +  ++  +   +P+VV+Y V++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMT-DRGNFPDVVSYGVVV 284

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +G C+ G  D+ L++ D +K    + D + Y + I  LCK G V  AE++ R M + G+F
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D V Y  +I GFC+ G +    +L++ M RK  + ++V+Y  +I G+ ++GK+ EA  +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +  K    D  T+  LI+G CK                   G + +A S+ N+M + 
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCK------------------AGEMKEAFSVHNQMVQK 446

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   N  T  +L +G  +  +++ A  L  EMSRKG  P V +YNT++NGLCK+    + 
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
              ++EM   G+ PD ITY+ L++  C+  ++  A +L    L K   P +  +N+L++G
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C +G +ED  +L   M ++  +PN  T+N+LM       +     EI+  + +  + PD
Sbjct: 567 FCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPD 626

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             +YNI +KG C    M +A+    + + +G   T  T+  L+R 
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 203/381 (53%), Gaps = 21/381 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           +H LC+ G V  A  +  +M + G F D V+Y  ++ G+CR G++ +  +L + +  KG 
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             +   YN +I  L +NG+V EA  +   +R+     D+  +  +I+G CK G ++ A +
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           + +E                  M +     +  T  S+++G  ++ K+  A  +F EM  
Sbjct: 369 LFDE------------------MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           KG  P  V+Y  LI+G CK     EA+S   +M++KG  P+++TY+ L +GLC++ +ID+
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV 470

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +L  +  +KG  P+V  YN +++GLC  G +E  ++L   M      P+ +TY TLMD
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
              K G+  KA E+   +L +RL+P ++++N+ + G C    + D    +   L +GI+P
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590

Query: 607 TTITWHILVRA--VMNNGAST 625
              T++ L++   + NN  +T
Sbjct: 591 NATTFNSLMKQYCIKNNMRAT 611



 Score = 38.9 bits (89), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 43/91 (47%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+ R  ++A      + EKG      +Y  +I G  K    + A  +F+EM + G+    
Sbjct: 638 CKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEK 697

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
             Y+I +D  +++G++    E+ +  + E S
Sbjct: 698 DIYDIFVDVNYEEGNWEITLELCDEFMTELS 728


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 216/410 (52%), Gaps = 22/410 (5%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           V++GL KSG +  A  + D+M   GV  N +CYN L+D + ++ D  R +EI E  +ME 
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE--IMEN 240

Query: 201 -SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             +   V TY ++++ L       +   +++ MK N    D + Y + I+  C+AGN+  
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A +V  E V +G+  +  TY  +I+GFC+ G+++    L   M  +G  LN + +N +I 
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G    G VD+A+ I   + +     D  T+  L  GLC+                    R
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR------------------VNR 402

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L +A +L++ M + G   N  T  +L++   +   +  A  LF+EM+ KG +P+VV+YN 
Sbjct: 403 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 462

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           +I+G  K     EA  F KEM +KG+ PD+ TY+ L++G C + K+D+ALKL  +  Q+G
Sbjct: 463 MIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 522

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
             P+V  Y  LI GL   G+ E A QLY +M K   +P+   Y+ L+  L
Sbjct: 523 TEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 198/388 (51%), Gaps = 22/388 (5%)

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA---GKIKECFELWEVMGR 304
           + GLCK+G V+ A R+  +M   G+ ++A+ YN+++D + R    G+++E  E+ E  G 
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGI 243

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           +    V +Y IL+  L     + +  +++  ++  N   D   +  +IN  C+ G + +A
Sbjct: 244 EA--TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 301

Query: 365 IQILNE-VEEGGE----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            ++L+E V  G E                G++  A  L+  M   G  LN    N++++G
Sbjct: 302 AKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           + +   +++A+ +   M + G    + +YNTL  GLC+V R  EA + +  M+E G  P+
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPN 421

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            +TY+ LI+  C+   +  A +L  +  +KG TP V  YN++I G    G + +A +   
Sbjct: 422 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            M+K+  VP++ TY +L+ G    G  D AL+++  + +    P++++Y   + GL    
Sbjct: 482 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 541

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
           R   AF+  +D L  G++P    +  LV
Sbjct: 542 RSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 197/405 (48%), Gaps = 20/405 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + + A+R L+ +   G+  +   Y ++++  V+  D      + + M   G+E  
Sbjct: 187 LCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 246

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y IL+D      D  + + ++  +    +V  +V  Y  +IN  C+ G      ++ 
Sbjct: 247 VGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCRAGNMRRAAKVL 305

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D    N  E +  TY   I+G CK G +E AE +  +M   G+ ++ + +N MIDG+CR 
Sbjct: 306 DECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRK 365

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + +  ++   M + G  L++ +YN L  GL    ++DEA ++  ++ E     +  T+
Sbjct: 366 GMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTY 425

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+  CK+G + +A ++  E+ E                   G   +  T N +++G+
Sbjct: 426 TTLISIHCKDGDMVEARRLFREMAE------------------KGATPSVVTYNVMIDGY 467

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   +  A    KEM +KG  P V +Y +L++G C   +   A    +EM ++G +P++
Sbjct: 468 TKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNV 527

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           + Y+ LI+GL +  + + A +L    L+ G  PD ++Y+ L+  L
Sbjct: 528 VAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 2/222 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CRK   + A +   ++ + G++ D+Y+Y T+  GL +   L  A  +   M E GV  N 
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V Y  LI    K GD + A+ ++ R + E    P+VVTYNVMI+G  K G   E      
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLF-REMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+K     D +TY S +HG C  G V+ A +++ EM + G   + V Y A+I G  + G
Sbjct: 482 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 541

Query: 291 KIKECFELWEVMGRKGCLNVVS-YNILIRGLLENGKVDEAIS 331
           + +  F+L++ M + G +   S Y+ L+  L  + + D  +S
Sbjct: 542 RSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 18/266 (6%)

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           V+++GLCK+G                  R+ DA  L++ M +HG  LNA   NSL++ ++
Sbjct: 182 VVVDGLCKSG------------------RVDDARRLLDDMPRHGVSLNALCYNSLLDCYV 223

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +         + + M  +G   TV +Y  L++ L       +  +   EM       D+ 
Sbjct: 224 RQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVY 283

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ +IN  C++  +  A K+  + +  G  P+   Y +LI+G C  G++E A  L ++M
Sbjct: 284 LYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 343

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           + +    N + +NT++DG  + G  D AL+I   + +  +  DI +YN    GLC  +R+
Sbjct: 344 QGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 403

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +A   L+  +  G++P  +T+  L+
Sbjct: 404 DEAKTLLHIMIEMGVVPNYVTYTTLI 429



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           I C+     +A+R    + EKG  P V +Y  +I+G  K G +  A     EM ++G   
Sbjct: 431 IHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVP 490

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +V  Y  L+ G    G    A +++E +  +    PNVV Y  +I+GL K GR +   ++
Sbjct: 491 DVYTYASLVHGHCVNGKVDVALKLFEEM-KQRGTEPNVVAYTALISGLAKEGRSEAAFQL 549

Query: 229 WDRMKKNEREKDSFTYCSFIHGL 251
           +D M K     D   Y + +  L
Sbjct: 550 YDDMLKAGLIPDDSLYSALVGSL 572


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 261/535 (48%), Gaps = 26/535 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R R F   +   + +  + L+    +Y T+IN    +GD+  A      +   G+  +
Sbjct: 51  LARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPD 106

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y   + G+ + G    A  ++  + +   +     TY  +++GL   G   E + ++
Sbjct: 107 SYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVF 165

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+ +    D+  Y + +HGLC+AG  E AE +  E + +G   + V YNA+IDG+C A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++   +++E M G +   NV +Y  LI GL ++GKV+ A+ ++  + E     +  T+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G C  G+L  A ++L+ +E  G                   ++ +A   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K+N     SL++G  +  K++ A  L ++M  +G  P   SY++LI+GLC+ ++  +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   +++M+EKG +   +TY+++I+ L +    +   K+  + +  G  PD+  Y + + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++EDA  +   M  R   PNLVTYNTL+ G    G   +A   +  ++ +  +P
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT---ITWHILVRAVMNNGA 623
           +  SY + L+ +   S   ++ +    A  + +  +    I W IL+  ++  G+
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGS 580



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 220/439 (50%), Gaps = 29/439 (6%)

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSFI 248
           + +  R++  ++  P +   N ++  L +   F +   +  RM  +N R     TY + I
Sbjct: 25  RRLSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR-----TYTTLI 79

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +  C AG++  A++    ++ +G+  D+  Y + + G+CRAG +     ++ +M  +GCL
Sbjct: 80  NAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCL 139

Query: 309 NVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
               +Y  L+ GLL  G V EA++++  +R  +C  D+  +  +++GLC+          
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE---------- 189

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                    GR  +A  L+     +G + N    N+L++G+  A ++E+A+ +F+ M   
Sbjct: 190 --------AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            CSP V +Y  LI+GLCK  +   A      M+E G +P+++TY+ LI G C    +  A
Sbjct: 242 RCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCA 301

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L       G  P+   +++LI  LC   KVE+A     ++ K+    N V Y +L+DG
Sbjct: 302 FRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDG 361

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
           L KTG  D A E+   ++ E   PD  SY+  + GLC   ++S A   L D + +GI  +
Sbjct: 362 LCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421

Query: 608 TITWHI----LVRAVMNNG 622
            +T+ I    LVR V + G
Sbjct: 422 PVTYTIIIDELVREVGSEG 440



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 234/508 (46%), Gaps = 34/508 (6%)

Query: 53  LVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFG 104
           ++ H  R+  L+ ++ C        +++       M  +A+ VF  M          ++ 
Sbjct: 122 MLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYA 181

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC   + E+A+  L      G +P++  Y  +I+G   +G++  AL VF+ M   
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
               NV  Y  LI G  K G   RA  ++ R+V E  + PNVVTY  +I G C  G    
Sbjct: 242 RCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +   M+ N    + +T+   I  LCK   VE A+     +V+ G+ V+ V Y ++ID
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+ GKI    EL + M  +G + +  SY+ LI GL    K+ +A  + E + EK   A
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
              T+ ++I+ L +              E G EG       + ++M   G   +  T   
Sbjct: 421 SPVTYTIIIDELVR--------------EVGSEG----PKKIFDKMIATGINPDIVTYTV 462

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            +  + +  ++E+A  +  +M  +G  P +V+YNTLI G   +    +A+S  + M+ KG
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLC----CQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           WKP+  +Y++L+  + +    D ++ +      + LQ+    D  ++ ILI+GL   G V
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQES-NYDEIVWKILIYGLLQKGSV 581

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +   L S MK+    P+  T N ++ G
Sbjct: 582 AEFSSLLSVMKEHGYQPS-NTINAMITG 608



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 50/303 (16%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + E+A+ FL SL +KG+K +   Y ++I+GL K+G +  A  +  +M   G   +
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+ LIDG  ++    +A  + E + ME  +  + VTY ++I+ L +    +   +++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDM-MEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D+M       D  TY  F+   C+ G +E AE +  +MV+ G+F + VTYN +I G+   
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIR------------------------------ 318
           G + + F  +EVM  KG   N  SY +L+R                              
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDE 565

Query: 319 --------GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
                   GLL+ G V E  S+  +++E      +T           N  +   I + NE
Sbjct: 566 IVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI----------NAMITGEITVTNE 615

Query: 371 VEE 373
           V+E
Sbjct: 616 VQE 618


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 158/569 (27%), Positives = 263/569 (46%), Gaps = 41/569 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQK------------------CYCPED---VALS 78
            FH I +    P L  +++ I +L   +K                  C   +D   V ++
Sbjct: 74  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 133

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           VI +   ++  +   +  +   + F     +    + F +A      + +KG   D  S 
Sbjct: 134 VIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSC 193

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
              +  L + G +   L  F  M    VE  V    I++DG  K+GD    +++ +  V 
Sbjct: 194 LVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDE-VA 252

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              V  NVVTYN  I G  K        E+   M+K     +  TY   IHG    G +E
Sbjct: 253 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 312

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A+R++ EM E GI  D   Y ++I   CR+G +K    L++ M  KG + +  +Y  LI
Sbjct: 313 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 372

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G+ + G+++ A  +   ++ K  + +      LI+G C++G +++A++           
Sbjct: 373 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR----------- 421

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                  L   M+K G + + +  NS+ +G  + ++ + A  L   M  +G SP  +S+ 
Sbjct: 422 -------LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLI+  CK   F EA    +EM EKG  P++ITY++LI+G  +   +  A KL  +   +
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  PDV     LIHG C  GKV+ AL+L+  M +R  VPN+VTY  ++ GL K G  ++A
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSC 586
            ++++ + E  L PD   Y+  +  L S 
Sbjct: 595 FKLYDEMKETGLTPDDTVYSSLVGSLHSA 623



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 256/524 (48%), Gaps = 37/524 (7%)

Query: 26  DSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIE-------IQKCYCPEDVALS 78
           D   +   +A   HLF+      +D  L V V+ I  L++         +    E     
Sbjct: 104 DKLHKSQKFAEIRHLFNCAA---VDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDL 160

Query: 79  VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGILCRKR--QFEKAKRFLNSLWEKG 130
           + + Y  N M  +AL+ F+ M       +   C   +L  +R  Q +   RF   +    
Sbjct: 161 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 220

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           ++  VYS   V++GL K GD+     + DE+  +GV+ NVV YN  I+G+FK+ D     
Sbjct: 221 VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVA 280

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           EI   L+ +  V  NVVTY ++I+G    G+ +E   +++ M++   E D + Y S I  
Sbjct: 281 EILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 339

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            C++GNV+ A  ++ EM + G+   A TY A+I G C+AG+++    L   M  KG  LN
Sbjct: 340 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 399

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V +N LI G  E+G VDEA+ +  ++ +K   +D   +  + +GLCK    ++A  +L 
Sbjct: 400 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 459

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            + E G                 EG   +A  +   M++ G   N  T N L++G+ +  
Sbjct: 460 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            ++ A  L  E+  +G  P V +  +LI+G C   +   A     EM ++G  P+++TY+
Sbjct: 520 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 579

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
            +I+GL +  + + A KL  +  + G TPD T+Y+ L+  L SA
Sbjct: 580 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 221/423 (52%), Gaps = 18/423 (4%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           V +  L + G+ D CL  + RM   + E   ++    + GLCK G+VE   ++  E+   
Sbjct: 195 VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK 254

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G+  + VTYNA I+G+ +   +    E+  +M ++G   NVV+Y +LI G    GK++EA
Sbjct: 255 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 314

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
             ++E +REK   AD   +  +I+  C++G + +A+ + +E+ + G              
Sbjct: 315 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 374

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G++  A  LVN M   G  LN    N+L++G+ ++  ++ A+ L   M +KG    
Sbjct: 375 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESD 434

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           V +YN++ +GLCK+ R  EA   +  M+E+G  P+ ++++ LI+  C+      A ++  
Sbjct: 435 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFR 494

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  +KG  P++  YN+LI G    G +++A +L   ++ R  +P++ T  +L+ G    G
Sbjct: 495 EMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDG 554

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D AL++++ + +  L P++++Y   + GL    R  +AF+  ++    G+ P    + 
Sbjct: 555 KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYS 614

Query: 613 ILV 615
            LV
Sbjct: 615 SLV 617



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 231/507 (45%), Gaps = 42/507 (8%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKS--GDLLGALAVFDEM--------FERGVETNVV 171
           F + + +   KPD+ +Y T+I  L +S   D L     F E+         + G+   V 
Sbjct: 74  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 133

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
               L+D    +    RAK   +   +   VY +    N M         F E LE ++ 
Sbjct: 134 VIASLVDDACNESKCNRAKFKEKFFDLLFRVYAD----NKM---------FGEALEAFEH 180

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M+K     D  +   ++  L + G V+   R +R MV   + V   +   ++DG C+ G 
Sbjct: 181 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++   +L + +  KG   NVV+YN  I G  +   +     I  L+ ++    +  T+ +
Sbjct: 241 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 300

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G    G + +A ++  E+ E                   G + + Y   S+++   +
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMRE------------------KGIEADVYVYTSIISCNCR 342

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  ++ A+ LF EM+ KG  P+  +Y  LI+G+CK  +   A   V EM  KG   + + 
Sbjct: 343 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 402

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           ++ LI+G C+S  +D AL+L     +KG   DV  YN +  GLC   + ++A  L  +M 
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           +R   PN +++ TL+D   K G+  +A  ++  + E+   P+II+YN+ + G      M 
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522

Query: 591 DAFEFLNDALCRGILPTTITWHILVRA 617
           +A +  ++   RG++P   T   L+  
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHG 549



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 190/429 (44%), Gaps = 56/429 (13%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR----------EMVESGI 272
           + CL+ +  ++KN  + D   Y + I  L ++   +   +  +            V+ G+
Sbjct: 69  ESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGL 128

Query: 273 FVDAVTYNAMIDGFCRAGK-----------------------IKECFELWEVMGRKGC-L 308
            V      +++D  C   K                         E  E +E M +KG  +
Sbjct: 129 RVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHI 188

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG--VLINGLCKNGYLNKAIQ 366
           +  S  + +  L   G+VD  +  +   R  N + + T +   ++++GLCK G +    +
Sbjct: 189 DERSCLVYLLALRRGGQVDSCLRFFR--RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRK 246

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +++EV                     G K N  T N+ + G+ +   L     +   M +
Sbjct: 247 LMDEVA------------------AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 288

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G +  VV+Y  LI+G   + +  EA    +EM EKG + D+  Y+ +I+  C+S  +  
Sbjct: 289 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 348

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL L  +   KG  P    Y  LIHG+C AG++E A  L + M+ +    N V +NTL+D
Sbjct: 349 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 408

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  ++G  D+AL +   + ++ L  D+ +YN    GLC  +R  +A   L   + RG+ P
Sbjct: 409 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468

Query: 607 TTITWHILV 615
            T+++  L+
Sbjct: 469 NTMSFTTLI 477


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 250/494 (50%), Gaps = 24/494 (4%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           +G+  + R    A   L  + ++G+  D  +  T +  L + G + GA A   EM  RG 
Sbjct: 136 SGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGA-AALAEMMVRGR 194

Query: 167 ET---NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFD 223
           E    +VV +N L+DG+ K GD   A    +R+  +  V  +VV YN ++ GLC+ G  D
Sbjct: 195 EIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQ-GVGVDVVGYNTLVAGLCRAGEAD 253

Query: 224 ECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMI 283
               M + MK +  E +  TY +FI   C+   V+ A  +Y EMV  G+  D VT +A++
Sbjct: 254 AARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALV 313

Query: 284 DGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCN 342
           DG CRAG+  E + L+  M + G   N V+Y  LI  L +  +  E+  +   +  +   
Sbjct: 314 DGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVV 373

Query: 343 ADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCN 402
            D   +  L++ L K G ++       EV++     L+D  +            N  T  
Sbjct: 374 MDLVMYTSLMDWLGKQGKID-------EVKDMFHCALSDNHTP-----------NGVTYT 415

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
            L++   +A  ++ A  +  EM  K   P VV+++++INGL K    G+A  ++++M E+
Sbjct: 416 VLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKER 475

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P+++TY  +++G  + ++ + AL L  + L +G   +  + ++L++GL   GK+E+A
Sbjct: 476 GIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEA 535

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
             L+ +M KR  + + V Y TL+DGLFK G+   A ++   + E  L PD + YN+ +  
Sbjct: 536 EALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNC 595

Query: 583 LCSCSRMSDAFEFL 596
           LC   +  +A   L
Sbjct: 596 LCMLGKSKEAESIL 609



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 209/430 (48%), Gaps = 22/430 (5%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDE-CLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           ++  S   + V+YNV+I+GL + GR       +   M K     D+ T  + +  LC+ G
Sbjct: 119 LLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDG 178

Query: 256 NVEGAERVYREMVESGIF--VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            VEGA  +   MV       +D V +NA++DG+C++G ++      + M  +G  ++VV 
Sbjct: 179 QVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVG 238

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN L+ GL   G+ D A  + E ++      +  T+   I   C+   ++          
Sbjct: 239 YNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVD---------- 288

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                   DA SL   M + G   +  T ++L++G  +A +   A  LF+EM + G +P 
Sbjct: 289 --------DAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPN 340

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            V+Y TLI+ L K  R  E++  + E++ +G   D++ Y+ L++ L +  KID    +  
Sbjct: 341 HVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFH 400

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
             L    TP+   Y +LI  LC AG V+ A Q+   M+ ++  PN+VT++++++GL K G
Sbjct: 401 CALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQG 460

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
              KA +    + E  + P++++Y   + G   C     A +  ++ LC G+        
Sbjct: 461 LLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVD 520

Query: 613 ILVRAVMNNG 622
           +LV  +  NG
Sbjct: 521 LLVNGLRKNG 530



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 210/458 (45%), Gaps = 21/458 (4%)

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            + V YN++I G  ++G +          + +  V  + VT N  +  LC+ G+ +    
Sbjct: 126 ADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAA 185

Query: 228 MWDRMKKNE--REKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           + + M +       D   + + + G CK+G++E A    + M   G+ VD V YN ++ G
Sbjct: 186 LAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAG 245

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            CRAG+      + E M   G   NVV+Y   I        VD+A S++E +       D
Sbjct: 246 LCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPD 305

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   L++GLC+                   GR ++A +L   M+K G   N  T  +L
Sbjct: 306 VVTLSALVDGLCR------------------AGRFSEAYALFREMEKIGAAPNHVTYCTL 347

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           ++   +A +   +  L  E+  +G    +V Y +L++ L K  +  E        L    
Sbjct: 348 IDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNH 407

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+ +TY++LI+ LC++  +D A ++  +   K   P+V  ++ +I+GL   G +  A  
Sbjct: 408 TPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAAD 467

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
               MK+R   PN+VTY T+MDG FK  + + AL++++ +L E +  +    ++ + GL 
Sbjct: 468 YMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLR 527

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              +M +A     D   RG+L   + +  L+  +   G
Sbjct: 528 KNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMG 565



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 197/415 (47%), Gaps = 28/415 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEK 129
           +++  Y K+   + AL   QRM       ++ G    +  LCR  + + A+  L ++   
Sbjct: 206 ALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGD 265

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P+V +Y T I    ++  +  A ++++EM   GV  +VV  + L+DG  + G +  A
Sbjct: 266 GVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEA 325

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ R + +    PN VTY  +I+ L K  R  E   +   +       D   Y S + 
Sbjct: 326 YALF-REMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMD 384

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCL 308
            L K G ++  + ++   +      + VTY  +ID  CRAG +    + L E+  +    
Sbjct: 385 WLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHP 444

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVV+++ +I GL + G + +A      ++E+  + +  T+G +++G  K      A+ + 
Sbjct: 445 NVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLY 504

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +E                  M   G ++N +  + L+NG  +  K+E A  LF++M+++G
Sbjct: 505 HE------------------MLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRG 546

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
                V+Y TLI+GL K+     A+   +E+ E+   PD + Y++ +N LC   K
Sbjct: 547 MLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGK 601


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 248/512 (48%), Gaps = 23/512 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG--VETNVV 171
           R  E     L+ + E G  P+  SY  V+  L  +     AL +   M ++G     +VV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y+ +I GFF +G+  +A  ++  +  +  V P+VVTYN++I+ LCK    D+   +  +
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  +  + D+ TY   IHG    G ++ A +++REM + G+  + VT N+ +   C+ G+
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            KE  E ++ M  KG   ++ SY  L+ G    G   + I ++  ++     A+     +
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+   K G ++ A+ I  E                  M + G   +  T +++++ F +
Sbjct: 446 LIHAYAKRGMVDDAMLIFTE------------------MQQQGVSPDVVTYSTVISTFSR 487

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW-KPDMI 469
             +L +A+  F +M  +G  P    Y+++I G C      +A   V EM+ KG  +PD++
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            +S +IN LC+  ++  A  +       G  P V  +N LI G C  GK++ A ++   M
Sbjct: 548 FFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +     P++VTYNTL+DG FK G  +  L ++  +  + ++P+ ++Y I L GL    R 
Sbjct: 608 EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
             A +  ++ +  G   T   + I++  +  N
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 278/581 (47%), Gaps = 31/581 (5%)

Query: 72  PEDVALS-VIQAYGKNSMPDKALDVFQRMNEIFG-CEAGILC---------RKRQFEKAK 120
           P  V+ S V++A   NSM  +ALD+ Q M +  G C   ++           + +  KA 
Sbjct: 226 PNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKAC 285

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
              + +  +G+KPDV +Y  +I+ L K+  +  A  V  +M   G + + V Y+ +I G+
Sbjct: 286 SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGY 345

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
              G    A +++ R + +  + PN+VT N  +  LCK GR  E  E +D M     + D
Sbjct: 346 ATLGRLKEAAKMF-REMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPD 404

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            F+YC+ +HG    G       ++  M  +GI  +   +  +I  + + G + +   ++ 
Sbjct: 405 IFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFT 464

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M ++G   +VV+Y+ +I      G++ +A+  +  +  +    ++  +  +I G C +G
Sbjct: 465 EMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHG 524

Query: 360 YLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNAYTC 401
            L KA ++++E+   G                  +GR+ DA  + +     G +    T 
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITF 584

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NSL++G+    K++ A  +   M   G  P +V+YNTL++G  K  R  +  +  +EM  
Sbjct: 585 NSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQR 644

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG KP+ +TY +++ GL ++ +   A K   + ++ G T  V++Y I++ GLC     ++
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A+ L+  +   N   ++   NT+++ ++K    ++A E++  I    L P+  +Y + + 
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            L     + DA    +     GI+P +   + ++R ++  G
Sbjct: 765 NLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 205/424 (48%), Gaps = 23/424 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P   TYN++++  C+  R D  L ++  + +   + D  T  + +  LC A   E A  V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 264 Y-REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILIRG 319
               M E G   +AV+Y+ ++   C     +   +L ++M ++G     +VV+Y+ +I G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
               G+  +A S++  +  +    D  T+ ++I+ LCK   ++KA  +L +         
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ--------- 325

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                    M   G + +  T + +++G+    +L+ A  +F+EM ++G  P +V+ N+ 
Sbjct: 326 ---------MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           +  LCK  R  EA  F   M  KG KPD+ +Y  L++G          + L       G 
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
             +  ++ ILIH     G V+DA+ +++ M+++   P++VTY+T++    + G    A+E
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI-LPTTITWHILVRAV 618
            +N ++   ++P+   Y+  ++G C    +  A E +++ + +GI  P  + +  ++ ++
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 619 MNNG 622
             +G
Sbjct: 557 CKDG 560



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 196/448 (43%), Gaps = 46/448 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           +I AY K  M D A+ +F  M +                           +G+ PDV +Y
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQ---------------------------QGVSPDVVTY 478

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
            TVI+   + G L  A+  F++M  RG++ N   Y+ +I GF   G  ++AKE+   ++ 
Sbjct: 479 STVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN 538

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +    P++V ++ +IN LCK GR  +  +++D            T+ S I G C  G ++
Sbjct: 539 KGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMD 598

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            A ++   M   G+  D VTYN ++DG+ + G+I +   L+  M RKG   N V+Y I++
Sbjct: 599 KAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL   G+   A   +  + E       + +G+++ GLC+N   ++AI            
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI------------ 706

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                  L  ++     K +    N+++N   +  + E A  LF  +S  G  P   +Y 
Sbjct: 707 ------ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I  L K     +A +    M + G  P     + +I  L +  +I  A     +   K
Sbjct: 761 VMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL 525
               + +  ++++      GK ++ ++L
Sbjct: 821 RILLEASTTSLMLSLFSRKGKYQEDIKL 848



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 192/451 (42%), Gaps = 66/451 (14%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA------------ERVYREMVES 270
           D+   M+D + +        +   F+  L +A +                 RV RE   +
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCREEAGT 150

Query: 271 GIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            + V    TYN ++D  CRA +      L+  + R G  ++ ++ N L++ L    + +E
Sbjct: 151 QVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEE 210

Query: 329 AISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVN 387
           A+++    + E  C  ++ ++ +++  LC N    +A+ +L  + + G            
Sbjct: 211 AVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQG------------ 258

Query: 388 RMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
                 C  +    +++++GF    +   A  LF EM+R+G  P VV+YN +I+ LCK  
Sbjct: 259 ----GACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL---------------CC 492
              +A   +++M   G +PD +TYS +I+G     ++  A K+               C 
Sbjct: 315 AMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCN 374

Query: 493 QFL--------------------QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            FL                     KG  PD+  Y  L+HG  S G   D + L+++MK  
Sbjct: 375 SFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN 434

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
               N   +  L+    K G  D A+ I+  + ++ + PD+++Y+  +       R++DA
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            E  N  + RGI P T  +  +++    +G 
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 166/354 (46%), Gaps = 28/354 (7%)

Query: 41  FHHILRRLIDPKLVVHVSRIL------------ELIE--IQKCYCPEDVAL--SVIQAYG 84
           F+ ++ R I P   V+ S I             EL+   I K     D+    SVI +  
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557

Query: 85  KNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKRFLNSLWEKGLKPDV 135
           K+     A D+F    +I G   G++         C   + +KA + L+++   G++PD+
Sbjct: 558 KDGRVMDAHDIFDLATDI-GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
            +Y T+++G  K+G +   L +F EM  +GV+ N V Y I++ G F+ G  + A++ +  
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           ++ E+     V  Y +++ GLC+    DE + ++ ++     +       + I+ + K  
Sbjct: 677 MI-ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSY-N 314
             E A+ ++  +  SG+  +  TY  MI    + G +++   ++  M + G +      N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLN 795

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
            +IR LLE G++ +A +    +  K    +++T  ++++   + G   + I++L
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 248/506 (49%), Gaps = 28/506 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ + ++A      + ++G+ PD+ +Y T+I+G  K+G L     +F +   +GV+ +
Sbjct: 188 FCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 247

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV ++  ID + K G    A ++++R++ +  + PNVVTY ++I GLC+ GR  E   ++
Sbjct: 248 VVVFSSTIDVYVKFGYLTTAFDVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGIY 306

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++ K   E    TY S I G CK GN+     +Y +M++ G   D V Y  ++DG C+ 
Sbjct: 307 CQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQ 366

Query: 290 GKIKECFEL-WEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +        + +G+    NVV +N LI G     + DEA+ ++ L+       D  T 
Sbjct: 367 GLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATI 426

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L+            + ++       EGRL +   L  RM K G + +A    +LM+ F
Sbjct: 427 TTLMR-----------VTVM-------EGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAF 468

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K    + LF  M R      +   N +IN L K +   EA  F   +LE   +PD+
Sbjct: 469 CKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDI 528

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I G C  +++D A ++        F P+     ILIH LC    ++ AL     
Sbjct: 529 VTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGAL----- 583

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
              R   P++++Y+ ++DGL K G  D+A  I++  ++ ++ PD+++Y I ++G C   R
Sbjct: 584 ---RIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGR 640

Query: 589 MSDAFEFLNDALCRGILPTTITWHIL 614
           + +A       L  G+ P  +    L
Sbjct: 641 LVEAALLYEHMLRNGVKPDDLLQRAL 666



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 258/578 (44%), Gaps = 69/578 (11%)

Query: 87  SMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP-DVYSYGTVINGL 145
           S P+ ALD F               R   F+K       L   G  P  V ++G V++ L
Sbjct: 79  SEPNSALDTFDGQ------------RSDSFDK-------LCRGGTVPFGVSAHGFVLDAL 119

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            + G++  AL     + ERG   ++V  N ++ G     D +        LV++    PN
Sbjct: 120 FRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL--SVDQIEVASRMLSLVLDCGPAPN 177

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VVT+  +ING CK G  D   E++  M++     D   Y + I G  KAG +    +++ 
Sbjct: 178 VVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFS 237

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENG 324
           + +  G+ +D V +++ ID + + G +   F++++ M  +G   NVV+Y ILI+GL ++G
Sbjct: 238 QALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDG 297

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-VEEGGEGRLADAA 383
           ++ EA  I+  + ++       T+  LI+G CK G L     +  + ++ G    +    
Sbjct: 298 RIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYG 357

Query: 384 SLVNRMDKHGCKL----------------NAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            LV+ + K G  L                N    NSL++G+ + ++ + A+ +F+ M   
Sbjct: 358 VLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIY 417

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V +  TL+       R  E       M + G +PD + +  L++  C++ K  + 
Sbjct: 418 GIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIG 477

Query: 488 LKLCCQFLQKGFTP-DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           L+L    +Q+   P D+ + N++I+ L     VE+A + ++N+ +    P++VTYNT++ 
Sbjct: 478 LQLF-DLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMIC 536

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLK------------------------- 581
           G       D+A  I+  +      P+ ++  I +                          
Sbjct: 537 GYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSII 596

Query: 582 --GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             GLC   R+ +A    + A+   ILP  + + IL+R 
Sbjct: 597 IDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRG 634



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 18/220 (8%)

Query: 72  PEDVAL-SVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRF 122
           P+ VA  +++ A+ KN  P   L +F  M       +I  C   I  L + +  E+A +F
Sbjct: 456 PDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKF 515

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
            N+L E  ++PD+ +Y T+I G      L  A  +F+ +       N V   ILI    K
Sbjct: 516 FNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCK 575

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
             D   A  I    ++  S+         +I+GLCK GR DE   ++ +    +   D  
Sbjct: 576 NSDMDGALRIISPSIISYSI---------IIDGLCKRGRVDEATNIFHQAIDAKILPDVV 626

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            Y   I G CK G +  A  +Y  M+ +G+  D +   A+
Sbjct: 627 AYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 169/631 (26%), Positives = 292/631 (46%), Gaps = 52/631 (8%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y H P +++ +L  L   K+     R+L L++ +  Y
Sbjct: 183 VLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIY 242

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
              +  L V+ +Y +      AL V   M    G E  +L          R  + EKA R
Sbjct: 243 RTPEAFLRVMVSYSRAGQLRDALKVLTLMQRA-GVEPNLLICNTTIDVFVRANRLEKALR 301

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL  +   G+ P+V +Y  +I G      +  A+ + D+M  +G   + V Y  ++    
Sbjct: 302 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLC 361

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+   +  +++ +++  E  +  + VTYN +I+ L K    DE L      ++     D 
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             Y + +H LCK G +  A+ +  EM+  G    D VTY A+++GFCR G++ +  +L +
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M   G   N VSY  L+ GL   GK  EA  +  +  E+  + +S T+ VL++GL K G
Sbjct: 482 IMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEG 541

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            L++A  ++ E+   G                 +GR  +A   +      GC +N     
Sbjct: 542 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 601

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++++GF Q  +L+ A+ +  +M        V +Y TL++ L K  R  EA   +K+ML K
Sbjct: 602 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHK 661

Query: 463 GWKPDMITYSLLINGLCQSKKID--------MALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           G  P  +TY  +I+  CQ +K+D        M L+  C+          T+YN +I  LC
Sbjct: 662 GIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCK----------TIYNQVIEKLC 711

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI- 573
             GK+E+A +L   + +     +  T   LM+G  K G    A ++   +    L PD+ 
Sbjct: 712 GLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVK 771

Query: 574 ----ISYNITLKGLCSCSRMSDAFEFLNDAL 600
               +S  + ++G  + + M   F  ++D L
Sbjct: 772 MCEKLSKRLVVEGAGNDNNMLLYFSLVSDNL 802



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 224/487 (45%), Gaps = 22/487 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           + D   Y +++  L K+    GA  V   M  RG+      +  ++  + + G    A +
Sbjct: 207 RHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALK 266

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +   L+    V PN++  N  I+   +  R ++ L   +RM+      +  TY   I G 
Sbjct: 267 VLT-LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           C    VE A  +  +M   G   D V+Y  ++   C+  +I E  +L + M ++  L  +
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRD 385

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN LI  L ++   DEA+   +   EK    D   +  +++ LCK            
Sbjct: 386 QVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCK------------ 433

Query: 370 EVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                 EGR+++A  L+N M   G C  +  T  +++NGF +  +++ A  L + M   G
Sbjct: 434 ------EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHG 487

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  VSY  L+NGLC+  +  EA   +    E+ W P+ ITYS+L++GL +  K+  A 
Sbjct: 488 YKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEAC 547

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  + + KGF P     N+L+  LC  G+  +A +       + C  N+V + T++ G 
Sbjct: 548 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 607

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            +  + D AL + + +       D+ +Y   +  L    R+++A E +   L +GI PT 
Sbjct: 608 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTP 667

Query: 609 ITWHILV 615
           +T+  ++
Sbjct: 668 VTYRTVI 674



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 2/250 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L DA  ++  M + G + N   CN+ ++ F++A++LE A+   + M   G  P VV+Y
Sbjct: 259 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 318

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +I G C + R  EA   + +M  KG  PD ++Y  ++  LC+ K+I     L  +  +
Sbjct: 319 NCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 378

Query: 497 K-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G   D   YN LIH L      ++AL    + +++    + V Y+ ++  L K G   
Sbjct: 379 EHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMS 438

Query: 556 KALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           +A ++ N +L +    PD+++Y   + G C    +  A + L      G  P T+++  L
Sbjct: 439 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTAL 498

Query: 615 VRAVMNNGAS 624
           +  +   G S
Sbjct: 499 LNGLCRTGKS 508


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 228/458 (49%), Gaps = 20/458 (4%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + +  +  KGLKP+ Y+Y  VI  L K+G +  A  V  EM   G+  + V Y  LIDGF
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K G+   A  +++ +  +  + P+ +TY  +I GLC+ GR  E  +++  M     E D
Sbjct: 269 CKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY + I G CK G ++ A  ++ +M++ G+  + VTY A+ DG C+ G++    EL  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M RKG  LN+ +YN L+ GL + G +D+A+ + + +     + D+ T+  L++  CK+ 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            + +A ++L ++                 +D+   +    T N LMNGF  +  LE+   
Sbjct: 448 EMVRAHELLRQM-----------------LDRE-LQPTVVTFNVLMNGFCMSGMLEDGEK 489

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           L K M  KG  P   +YN+LI   C            + M  KG  PD  TY++LI G C
Sbjct: 490 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +++ +  A  L    + KGF   V+ YN LI G     K  +A +L+  M++   V +  
Sbjct: 550 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 609

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
            YN   D  +  G  +  LE+ +  +E+ L  DI + N
Sbjct: 610 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 205/393 (52%), Gaps = 19/393 (4%)

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           L++ + M+    + + +TY   I  LCK G V  AERV REM+  GI  D V Y  +IDG
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 286 FCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC+ G +   + L+ E+  RK   + ++Y  +I GL + G+V EA  ++  +  K    D
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  LI+G CK                  EG++ +A SL N+M + G   N  T  +L
Sbjct: 328 EVTYTALIDGYCK------------------EGKMKEAFSLHNQMLQMGLTPNIVTYTAL 369

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
            +G  +  +++ A  L  EM RKG    + +YN+L+NGLCK     +A   +K+M   G+
Sbjct: 370 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 429

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            PD +TY+ L++  C+S+++  A +L  Q L +   P V  +N+L++G C +G +ED  +
Sbjct: 430 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 489

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           L   M ++  +PN  TYN+L+       +     EI+  +  + + PD  +YNI +KG C
Sbjct: 490 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549

Query: 585 SCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
               M +A+    D + +G   T  +++ L++ 
Sbjct: 550 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 582



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 190/379 (50%), Gaps = 28/379 (7%)

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMI-------DGFCRAGKIKECFELWEVMGRKGC-L 308
           V  A +++ +M+  G+ +   + N  I       DG   A K +   +L E M  KG   
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +YN +I  L + GKV EA  +   +  +    D   +  LI+G CK G ++ A ++ 
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           +E                  M K     +  T  +++ G  Q  ++  A  LF EM  K 
Sbjct: 282 DE------------------MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V+Y  LI+G CK  +  EA+S   +ML+ G  P+++TY+ L +GLC+  ++D A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  +  +KG   ++  YN L++GLC AG ++ A++L  +M+     P+ VTY TLMD  
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K+ +  +A E+   +L+  L+P ++++N+ + G C    + D  + L   L +GI+P  
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 609 ITWHILVRA--VMNNGAST 625
            T++ L++   + NN  +T
Sbjct: 504 TTYNSLIKQYCIRNNMRAT 522



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 25/375 (6%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL------IEIQKCYC----- 71
            L D   +    + +  LF  + +R I P  + + + I  L      +E  K +      
Sbjct: 263 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322

Query: 72  ---PEDVALS-VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKA 119
              P++V  + +I  Y K     +A  +  +M ++        +   A  LC+  + + A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
              L+ +  KGL+ ++Y+Y +++NGL K+G++  A+ +  +M   G   + V Y  L+D 
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + K  + +RA E+  R +++  + P VVT+NV++NG C  G  ++  ++   M +     
Sbjct: 443 YCKSREMVRAHELL-RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 501

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           ++ TY S I   C   N+     +YR M   G+  D  TYN +I G C+A  +KE + L 
Sbjct: 502 NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLH 561

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  KG  L V SYN LI+G  +  K  EA  ++E +R +   AD   + +  +     
Sbjct: 562 RDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDE 621

Query: 359 GYLNKAIQILNEVEE 373
           G +   +++ +E  E
Sbjct: 622 GKMELTLELCDEAIE 636


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 24/437 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERL--VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           YN L++   K G   R   ++     ++     PN  TY  ++  LC+  RF+E   ++ 
Sbjct: 20  YNYLLEVLAKSG---RCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       + F+Y   I GLC+   V+ A  +  EM++ G   + VTY +++ G C+ G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K+KE  +L+  M  +GC  + V YN+LI G  + G + EA  ++E + EK C     T+ 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            L++G  + G   +                    SL   M + GC  N +T N+L++GF 
Sbjct: 197 SLLSGFSRKGEFGRV------------------QSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   +  A  LF EM   GC P VVSYNTL+ G+C   +  EA   ++EM+  G  PD++
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           +Y++LI+G  +S  +D A+KL  +  + G  PD   Y+ +I  LC AGKV  A  ++ +M
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                 P+      L+ GL +     ++ E++  +++    P I  YN+ +  LC   R 
Sbjct: 359 IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRS 418

Query: 590 SDAFEFLNDALCRGILP 606
            D  E  ++   RG  P
Sbjct: 419 DDVCEIFHELTERGFSP 435



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 209/448 (46%), Gaps = 20/448 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SY  ++  L KSG        +++M   G   N   Y  L+    +   +  A+ ++ R 
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF-RG 77

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +      PNV +Y+++I GLC+  + DE  E+ + M     + +  TY S + GLCK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A  ++  MV  G   D V YN +IDGF + G + E + L+E M  KGC+  V +YN 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ G    G+     S+++ +  + C  +  T   L++G CK G                
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG---------------- 241

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
              + +A  L   M   GC  +  + N+LM G     K   A  L +EM R G  P +VS
Sbjct: 242 --DMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN LI+G  K      A     E+ + G +PD  +YS +I+ LC++ K+  A  +    +
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  PD  +   L+ GLC   ++ ++ +L+  M K  CVP +  YN LM  L K    D
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419

Query: 556 KALEIWNHILEERLRPDIISYNITLKGL 583
              EI++ + E    PD+    + L+ L
Sbjct: 420 DVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 221/435 (50%), Gaps = 20/435 (4%)

Query: 124 NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKK 183
           N +   G  P+ Y+YG ++  L ++     A +VF  M  +G   NV  Y+ILI G  + 
Sbjct: 41  NDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 184 GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT 243
                A E+   ++ +    PNVVTY  +++GLCK G+  E ++++ RM       D   
Sbjct: 101 QKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV 159

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y   I G  K G++  A R++ EM+E G      TYN+++ GF R G+      L++ M 
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219

Query: 304 RKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLN 362
           R+GC+ N+ ++N L+ G  + G + EA  ++  +R   C  D  ++  L+ G+C  G  +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPH 279

Query: 363 KAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
           +A ++L E                  M + G   +  + N L++G+ ++  L++AI LF 
Sbjct: 280 EAQRLLRE------------------MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           E+ + G  P   SY+T+I+ LC+  + G A+   K+M+  G  PD      L+ GLC+ +
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++  + +L    ++    P +  YN+L++ LC A + +D  +++  + +R   P++    
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISK 441

Query: 543 TLMDGLFKTGDCDKA 557
            +++ L ++ D + A
Sbjct: 442 VILETLRRSDDKEAA 456



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 189/376 (50%), Gaps = 19/376 (5%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           + +Y   +  L K+G  +     Y +M+ +G   +  TY  ++   C+A + +E   ++ 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +GC  NV SY+ILI GL    KVDEA  +   + +     +  T+G L++GLCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             +L +A  L +RM   GC  +    N L++GF +   +  A  
Sbjct: 137 ------------------KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+EM  KGC PTV +YN+L++G  +   FG   S  K+ML +G  P++ T++ L++G C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +   +  A +L  +    G  PDV  YN L+ G+CS GK  +A +L   M +    P++V
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDA 599
           +YN L+DG  K+G  D A++++  I +  L PD  SY+  +  LC   ++  AF    D 
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 600 LCRGILPTTITWHILV 615
           +  G  P       LV
Sbjct: 359 IANGSAPDAAVVIPLV 374



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 19/412 (4%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
             ++YN ++  L K GR D     ++ M       +++TY   +  LC+A   E A  V+
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
           R M   G   +  +Y+ +I G CR  K+ E  EL   M   G   NVV+Y  L+ GL + 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           GK+ EA+ ++  +  + C  D   + VLI+G  K G + +A ++  E+ E          
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE---------- 185

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
                    GC    +T NSL++GF +  +      LFK+M R+GC P + ++N L++G 
Sbjct: 186 --------KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK+    EA+    EM   G  PD+++Y+ L+ G+C   K   A +L  + ++ G  PD+
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YNILI G   +G ++ A++L+  + K    P+  +Y+T++D L + G    A  ++  
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           ++     PD       + GLC   R++++ E     +    +P    +++L+
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 207/405 (51%), Gaps = 20/405 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++FE+A+     +  +G  P+V+SY  +I GL +   +  A  + +EM + G + N
Sbjct: 62  LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L+ G  K G    A +++ R+V      P+ V YNV+I+G  K G   E   ++
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +       FTY S + G  + G     + ++++M+  G   +  T+N ++DGFC+ 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E   L+  M   GC  +VVSYN L+RG+   GK  EA  +   +       D  ++
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +LI+G  K+G L+ AI++  E+                   K G + +A++ +++++  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIP------------------KSGLEPDAFSYSTIIDCL 342

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K+  A  +FK+M   G +P       L+ GLC+ ER  E+    + M++    P +
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             Y+LL+  LC++K+ D   ++  +  ++GF+PDV +  +++  L
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 193/379 (50%), Gaps = 20/379 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR ++ ++A   LN + + G +P+V +YG++++GL K G L  A+ +F  M  RG   +
Sbjct: 97  LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN+LIDGF KKGD   A  ++E + +E    P V TYN +++G  + G F     ++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEM-LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     + FT+ + + G CK G++  A R++ EM   G   D V+YN ++ G C  
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK 275

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK  E   L   M R G   ++VSYNILI G  ++G +D AI ++  + +     D+ ++
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+ LC+ G +  A  +  ++   G     DAA ++                 L+ G 
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSA--PDAAVVI----------------PLVIGL 377

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L  +  LF+ M +  C P +  YN L+  LCK +R  +      E+ E+G+ PD+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 469 ITYSLLINGLCQSKKIDMA 487
               +++  L +S   + A
Sbjct: 438 EISKVILETLRRSDDKEAA 456



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 18/315 (5%)

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
             +SYN L+  L ++G+ D     +  +    C  ++ T+G L+  LC+           
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQ----------- 64

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R  +A S+   M   GC  N ++ + L+ G  +  K++ A  L  EM   G
Sbjct: 65  -------AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+Y +L++GLCK+ +  EA      M+ +G  PD + Y++LI+G  +   +  A 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +L  + L+KG  P V  YN L+ G    G+      L+ +M ++ CVPN+ T+N L+DG 
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K GD  +A  ++  +      PD++SYN  ++G+CS  +  +A   L + +  G+ P  
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 609 ITWHILVRAVMNNGA 623
           ++++IL+     +GA
Sbjct: 298 VSYNILIDGYSKSGA 312



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 34/186 (18%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C K +  +A+R L  +   G+ PD+ SY  +I+G  KSG L  A+ +F E+ + G+E +
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSV--------------------------- 202
              Y+ +ID   + G    A  +++ ++   S                            
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ 391

Query: 203 -------YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                   P +  YN+++  LCK  R D+  E++  + +     D       +  L ++ 
Sbjct: 392 AMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSD 451

Query: 256 NVEGAE 261
           + E AE
Sbjct: 452 DKEAAE 457


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 158/569 (27%), Positives = 263/569 (46%), Gaps = 41/569 (7%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQK------------------CYCPED---VALS 78
            FH I +    P L  +++ I +L   +K                  C   +D   V ++
Sbjct: 78  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 137

Query: 79  VIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
           VI +   ++  +   +  +   + F     +    + F +A      + +KG   D  S 
Sbjct: 138 VIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSC 197

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
              +  L + G +   L  F  M    VE  V    I++DG  K+GD    +++ +  V 
Sbjct: 198 LVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDE-VA 256

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
              V  NVVTYN  I G  K        E+   M+K     +  TY   IHG    G +E
Sbjct: 257 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 316

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A+R++ EM E GI  D   Y ++I   CR+G +K    L++ M  KG + +  +Y  LI
Sbjct: 317 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 376

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G+ + G+++ A  +   ++ K  + +      LI+G C++G +++A++           
Sbjct: 377 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR----------- 425

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                  L   M+K G + + +  NS+ +G  + ++ + A  L   M  +G SP  +S+ 
Sbjct: 426 -------LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           TLI+  CK   F EA    +EM EKG  P++ITY++LI+G  +   +  A KL  +   +
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G  PDV     LIHG C  GKV+ AL+L+  M +R  VPN+VTY  ++ GL K G  ++A
Sbjct: 539 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSC 586
            ++++ + E  L PD   Y+  +  L S 
Sbjct: 599 FKLYDEMKETGLTPDDTVYSSLVGSLHSA 627



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 245/483 (50%), Gaps = 28/483 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGILCRKR--QFEKAKRFLNSLWEKG 130
           + + Y  N M  +AL+ F+ M       +   C   +L  +R  Q +   RF   +    
Sbjct: 165 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 224

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           ++  VYS   V++GL K GD+     + DE+  +GV+ NVV YN  I+G+FK+ D     
Sbjct: 225 VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVA 284

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           EI   L+ +  V  NVVTY ++I+G    G+ +E   +++ M++   E D + Y S I  
Sbjct: 285 EILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 343

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            C++GNV+ A  ++ EM + G+   A TY A+I G C+AG+++    L   M  KG  LN
Sbjct: 344 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 403

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V +N LI G  E+G VDEA+ +  ++ +K   +D   +  + +GLCK    ++A  +L 
Sbjct: 404 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 463

Query: 370 EVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            + E G                 EG   +A  +   M++ G   N  T N L++G+ +  
Sbjct: 464 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            ++ A  L  E+  +G  P V +  +LI+G C   +   A     EM ++G  P+++TY+
Sbjct: 524 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 583

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            +I+GL +  + + A KL  +  + G TPD T+Y+ L+  L SA +   ++Q+  +  K 
Sbjct: 584 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE-SISMQIQGSQVKA 642

Query: 533 NCV 535
           N V
Sbjct: 643 NKV 645



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 221/423 (52%), Gaps = 18/423 (4%)

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           V +  L + G+ D CL  + RM   + E   ++    + GLCK G+VE   ++  E+   
Sbjct: 199 VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK 258

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEA 329
           G+  + VTYNA I+G+ +   +    E+  +M ++G   NVV+Y +LI G    GK++EA
Sbjct: 259 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 318

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-------------- 375
             ++E +REK   AD   +  +I+  C++G + +A+ + +E+ + G              
Sbjct: 319 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 378

Query: 376 ---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
               G++  A  LVN M   G  LN    N+L++G+ ++  ++ A+ L   M +KG    
Sbjct: 379 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESD 438

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           V +YN++ +GLCK+ R  EA   +  M+E+G  P+ ++++ LI+  C+      A ++  
Sbjct: 439 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFR 498

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTG 552
           +  +KG  P++  YN+LI G    G +++A +L   ++ R  +P++ T  +L+ G    G
Sbjct: 499 EMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDG 558

Query: 553 DCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWH 612
             D AL++++ + +  L P++++Y   + GL    R  +AF+  ++    G+ P    + 
Sbjct: 559 KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYS 618

Query: 613 ILV 615
            LV
Sbjct: 619 SLV 621



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 231/507 (45%), Gaps = 42/507 (8%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKS--GDLLGALAVFDEM--------FERGVETNVV 171
           F + + +   KPD+ +Y T+I  L +S   D L     F E+         + G+   V 
Sbjct: 78  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 137

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
               L+D    +    RAK   +   +   VY +    N M         F E LE ++ 
Sbjct: 138 VIASLVDDACNESKCNRAKFKEKFFDLLFRVYAD----NKM---------FGEALEAFEH 184

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M+K     D  +   ++  L + G V+   R +R MV   + V   +   ++DG C+ G 
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++   +L + +  KG   NVV+YN  I G  +   +     I  L+ ++    +  T+ +
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 304

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+G    G + +A ++  E+ E                   G + + Y   S+++   +
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMRE------------------KGIEADVYVYTSIISCNCR 346

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
           +  ++ A+ LF EM+ KG  P+  +Y  LI+G+CK  +   A   V EM  KG   + + 
Sbjct: 347 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 406

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           ++ LI+G C+S  +D AL+L     +KG   DV  YN +  GLC   + ++A  L  +M 
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMS 590
           +R   PN +++ TL+D   K G+  +A  ++  + E+   P+II+YN+ + G      M 
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526

Query: 591 DAFEFLNDALCRGILPTTITWHILVRA 617
           +A +  ++   RG++P   T   L+  
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHG 553



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 190/429 (44%), Gaps = 56/429 (13%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR----------EMVESGI 272
           + CL+ +  ++KN  + D   Y + I  L ++   +   +  +            V+ G+
Sbjct: 73  ESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGL 132

Query: 273 FVDAVTYNAMIDGFCRAGK-----------------------IKECFELWEVMGRKGC-L 308
            V      +++D  C   K                         E  E +E M +KG  +
Sbjct: 133 RVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHI 192

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG--VLINGLCKNGYLNKAIQ 366
           +  S  + +  L   G+VD  +  +   R  N + + T +   ++++GLCK G +    +
Sbjct: 193 DERSCLVYLLALRRGGQVDSCLRFFR--RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRK 250

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
           +++EV                     G K N  T N+ + G+ +   L     +   M +
Sbjct: 251 LMDEVA------------------AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
           +G +  VV+Y  LI+G   + +  EA    +EM EKG + D+  Y+ +I+  C+S  +  
Sbjct: 293 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 352

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           AL L  +   KG  P    Y  LIHG+C AG++E A  L + M+ +    N V +NTL+D
Sbjct: 353 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 412

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           G  ++G  D+AL +   + ++ L  D+ +YN    GLC  +R  +A   L   + RG+ P
Sbjct: 413 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472

Query: 607 TTITWHILV 615
            T+++  L+
Sbjct: 473 NTMSFTTLI 481


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 242/472 (51%), Gaps = 22/472 (4%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
           +  +  ++  LVK    L  +++  +M  +G+E N+V  +ILI+ F   G    +  +  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           + +++    PN +T+  ++ GLC  G   + L   D++     + +  +Y + ++GLCK 
Sbjct: 70  K-ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSY 313
           G    A ++ R + +     + V Y+A+IDG C+   + E ++L+  M  R+   NV++Y
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N LI      G++  A S+   +  KN N D  T  +LI+ LCK G              
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG-------------- 234

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                  +A  + + M + G   N Y+ N ++NG  +  +++ A+ L +EM  K   P  
Sbjct: 235 ------KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 288

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YN+LI+GLCK  R   A + + EM  +G   D++TY+ L++ LC+++ +D A  L  +
Sbjct: 289 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 348

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             ++G  P +  Y  LI GLC  G++++A +L+ ++  + C  ++ TY  ++ GL K G 
Sbjct: 349 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 408

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
            D+AL I + + +    P+ +++ I ++ L        A + L++ + +G+L
Sbjct: 409 FDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 221/450 (49%), Gaps = 22/450 (4%)

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ +N ++    K   Y+    + +++ ++  +  N+VT +++IN  C  G+      + 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVK-GIEQNLVTLSILINCFCHLGQMAFSFSLL 68

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            ++ K     ++ T+ + + GLC  G V+     + ++V      + V+Y  +++G C+ 
Sbjct: 69  GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ +   +L  ++  R    NVV Y+ +I GL ++  V+EA  ++  +  +    +  T+
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI   C                    G+L  A SL++ M       + YT + L++  
Sbjct: 189 NTLICAFCL------------------AGQLMGAFSLLHEMILKNINPDVYTFSILIDAL 230

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K  NA  +F  M + G +P V SYN +INGLCK +R  EA + ++EML K   PD 
Sbjct: 231 CKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 288

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ LI+GLC+S +I  AL L  +   +G   DV  Y  L+  LC    ++ A  L+  
Sbjct: 289 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 348

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           MK+R   P + TY  L+DGL K G    A E++ H+L +    D+ +Y + + GLC    
Sbjct: 349 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 408

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAV 618
             +A    +     G +P  +T+ I++R++
Sbjct: 409 FDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 198/391 (50%), Gaps = 22/391 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K + +K   F + +  +  + +  SYGT++NGL K+G+   A+ +   + +R    N
Sbjct: 90  LCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPN 149

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +IDG  K      A +++  +     ++PNV+TYN +I   C  G+      + 
Sbjct: 150 VVMYSAIIDGLCKDKLVNEAYDLYSEMDAR-EIFPNVITYNTLICAFCLAGQLMGAFSLL 208

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D +T+   I  LCK G  + A++++  MV+ G+  +  +YN MI+G C+ 
Sbjct: 209 HEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 266

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++ E   L   M  K  + + V+YN LI GL ++G++  A+++   +  +   AD  T+
Sbjct: 267 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 326

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             L++ LCKN  L+K                  A +L  +M + G +   YT  +L++G 
Sbjct: 327 TSLLDALCKNQNLDK------------------ATALFMKMKERGIQPTMYTYTALIDGL 368

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L+NA  LF+ +  KGC   V +Y  +I+GLCK   F EA +   +M + G  P+ 
Sbjct: 369 CKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNA 428

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           +T+ ++I  L +  + D A KL  + + KG 
Sbjct: 429 VTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 55/436 (12%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           KG++ ++ +   +IN     G +  + ++  ++ + G   N + +  L+ G   KG+  +
Sbjct: 39  KGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKK 98

Query: 189 AKEIWE----------------------------------RLVMETSVYPNVVTYNVMIN 214
                +                                  R++ + S  PNVV Y+ +I+
Sbjct: 99  LLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIID 158

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
           GLCK    +E  +++  M   E   +  TY + I   C AG + GA  +  EM+   I  
Sbjct: 159 GLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINP 218

Query: 275 DAVTYNAMIDGFCRAGK-IKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           D  T++ +ID  C+ GK  K+ F     MG     NV SYNI+I GL +  +VDEA+++ 
Sbjct: 219 DVYTFSILIDALCKEGKNAKQIFHAMVQMGVNP--NVYSYNIMINGLCKCKRVDEAMNLL 276

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             +  KN   D+ T+  LI+GLCK+                  GR+  A +L+N M   G
Sbjct: 277 REMLHKNMVPDTVTYNSLIDGLCKS------------------GRITSALNLMNEMHHRG 318

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              +  T  SL++   +   L+ A  LF +M  +G  PT+ +Y  LI+GLCK  R   A 
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 378

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              + +L KG   D+ TY+++I+GLC+    D AL +  +    G  P+   + I+I  L
Sbjct: 379 ELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438

Query: 514 CSAGKVEDALQLYSNM 529
               + + A +L   M
Sbjct: 439 FEKDENDKAEKLLHEM 454



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 169/369 (45%), Gaps = 57/369 (15%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK-------- 147
           FQ     +G     LC+  +   A + L  + ++  +P+V  Y  +I+GL K        
Sbjct: 111 FQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAY 170

Query: 148 ---------------------------SGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                                      +G L+GA ++  EM  + +  +V  ++ILID  
Sbjct: 171 DLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL 230

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K+G    AK+I+  +V +  V PNV +YN+MINGLCKC R DE + +   M       D
Sbjct: 231 CKEGK--NAKQIFHAMV-QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 287

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           + TY S I GLCK+G +  A  +  EM   G   D VTY +++D  C+   + +   L+ 
Sbjct: 288 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 347

Query: 301 VMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M  +G    + +Y  LI GL + G++  A  +++ L  K C  D  T+ V+I+GLCK  
Sbjct: 348 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK-- 405

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                           EG   +A ++ ++M+ +GC  NA T   ++    +  + + A  
Sbjct: 406 ----------------EGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 449

Query: 420 LFKEMSRKG 428
           L  EM  KG
Sbjct: 450 LLHEMIAKG 458



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 157/316 (49%), Gaps = 20/316 (6%)

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           ++ +N ++  L++       IS+ + +  K    +  T  +LIN  C             
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCH------------ 57

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                  G++A + SL+ ++ K G   N  T  +LM G     +++  +    ++  +  
Sbjct: 58  ------LGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAF 111

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
               VSY TL+NGLCK      A   ++ + ++  +P+++ YS +I+GLC+ K ++ A  
Sbjct: 112 QTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYD 171

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +   +   P+V  YN LI   C AG++  A  L   M  +N  P++ T++ L+D L 
Sbjct: 172 LYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALC 231

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K G    A +I++ +++  + P++ SYNI + GLC C R+ +A   L + L + ++P T+
Sbjct: 232 KEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289

Query: 610 TWHILVRAVMNNGAST 625
           T++ L+  +  +G  T
Sbjct: 290 TYNSLIDGLCKSGRIT 305



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 144/316 (45%), Gaps = 49/316 (15%)

Query: 59  RILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMN--EIF------GCEAGI 109
           ++L +IE  +   P  V  S +I    K+ + ++A D++  M+  EIF            
Sbjct: 136 KLLRMIE-DRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICA 194

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   Q   A   L+ +  K + PDVY++  +I+ L K G    A  +F  M + GV  N
Sbjct: 195 FCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPN 252

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YNI+I+G  K      A  +  R ++  ++ P+ VTYN +I+GLCK GR    L + 
Sbjct: 253 VYSYNIMINGLCKCKRVDEAMNLL-REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M    +  D  TY S +  LCK  N++ A  ++ +M E GI     TY A+IDG C+ 
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371

Query: 290 GKIKECFELWEVMGRKGCL------------------------------------NVVSY 313
           G++K   EL++ +  KGC                                     N V++
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431

Query: 314 NILIRGLLENGKVDEA 329
            I+IR L E  + D+A
Sbjct: 432 EIIIRSLFEKDENDKA 447



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ ++ ++A   L  +  K + PD  +Y ++I+GL KSG +  AL + +EM  RG   +
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y  L+D   K  +  +A  ++ ++  E  + P + TY  +I+GLCK GR     E++
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPTMYTYTALIDGLCKGGRLKNAQELF 381

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             +       D +TY   I GLCK G  + A  +  +M ++G   +AVT+  +I      
Sbjct: 382 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441

Query: 290 GKIKECFELWEVMGRKGCLNVVSYN 314
            +  +  +L   M  KG L   +++
Sbjct: 442 DENDKAEKLLHEMIAKGLLGFRNFH 466



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 21/261 (8%)

Query: 17  NP--HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPE- 73
           NP  +T   L D+  +E    ++  +FH +++  ++P +  +   I  L     C C   
Sbjct: 217 NPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGL-----CKCKRV 269

Query: 74  DVALSVI-QAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           D A++++ +   KN +PD            +      LC+  +   A   +N +  +G  
Sbjct: 270 DEAMNLLREMLHKNMVPDTV---------TYNSLIDGLCKSGRITSALNLMNEMHHRGQP 320

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
            DV +Y ++++ L K+ +L  A A+F +M ERG++  +  Y  LIDG  K G    A+E+
Sbjct: 321 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 380

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           ++ L+++     +V TY VMI+GLCK G FDE L +  +M+ N    ++ T+   I  L 
Sbjct: 381 FQHLLVKGCCI-DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF 439

Query: 253 KAGNVEGAERVYREMVESGIF 273
           +    + AE++  EM+  G+ 
Sbjct: 440 EKDENDKAEKLLHEMIAKGLL 460


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 258/528 (48%), Gaps = 29/528 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  +   A+R L +    G   +V +Y  +I+G  +SG L  AL +   M    V  + 
Sbjct: 135 CRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDT 190

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN ++ G      +  A+E+   ++      PN VT+   I   C+ G  D  +++ D
Sbjct: 191 YTYNTVLKGLCIAKKWEEAEELMAEMI-RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLD 249

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M +     D   Y + I+G  + G+V+ A  +   M+      + V YNA + G C A 
Sbjct: 250 QMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAE 306

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + ++  EL   M RKGC  N  ++++LI  L +N  VD A+ + E + +  C  D+  + 
Sbjct: 307 RWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYN 366

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEG--------------RLADAASLVNRMDKHGCK 395
           ++IN L + G ++ A+++LN +    +               R  DA+ L+ +M +  C 
Sbjct: 367 IIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCP 426

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
           L   T N L++   Q   +  A  +F++M R  C+P +V+Y++L+NG  +      A   
Sbjct: 427 LIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQL 486

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            + M     KPD+ +Y+ ++ GLC++ + + A +L  + + K   P+   +NILI+ LC 
Sbjct: 487 FRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQ 543

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G V+ A+++   M      P++ TYN L++G  + G  D AL++ + +     +PD IS
Sbjct: 544 KGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAIS 600

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           YN TLKGLC   R  DA E + + L     P  +T+      +M N A
Sbjct: 601 YNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRA 648



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 220/444 (49%), Gaps = 33/444 (7%)

Query: 100 NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           NE+ F  +    C+    ++A + L+ +   G  PDV  Y T+ING  + G +  AL + 
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           + M     + N VCYN  + G      +    E+   +V +    PN  T++++I+ LC+
Sbjct: 284 NTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK-GCSPNEATFSMLISSLCQ 339

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
               D  +E+ ++M+K   E D+  Y   I+ L + G V+ A R+   MV      DA+ 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALG 396

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +NA++ GFCRA +  +  EL   M R  C L  +++NILI  L +NG V+ A  ++E + 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
              C  D  T+  L+NG  + G +  AIQ+   +                      CK +
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---------------------CKPD 495

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            ++ N+++ G  +A++ E+A  L  EM  K C P  V++N LIN LC+      A   ++
Sbjct: 496 IFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLE 555

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M   G  PD+ TY+ LING  +  ++D ALKL      K   PD   YN  + GLC A 
Sbjct: 556 QMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAE 612

Query: 518 KVEDALQLYSNMKKRNCVPNLVTY 541
           + +DA +L + M +  C PN VT+
Sbjct: 613 RWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 228/453 (50%), Gaps = 33/453 (7%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N L+ G+ + G    A+ +        +   NVVTY  +I+G C+ GR D+ L +  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLG--AARATGAANVVTYTALIDGYCRSGRLDDALRLIA 182

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       D++TY + + GLC A   E AE +  EM+ +    + VT+   I  FC+ G
Sbjct: 183 SMPV---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    +L + M R GC  +VV Y+ LI G  E G VD+A+   +LL    C  ++  + 
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL---DLLNTMLCKPNTVCYN 296

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             + GLC          I    E+ GE        L+  M + GC  N  T + L++   
Sbjct: 297 AALKGLC----------IAERWEDIGE--------LMAEMVRKGCSPNEATFSMLISSLC 338

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q + +++A+ + ++M + GC P  V+YN +IN L +  R  +A   +  M+    KPD +
Sbjct: 339 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDAL 395

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            ++ ++ G C++++   A +L  Q  +         +NILI  LC  G V  A Q++  M
Sbjct: 396 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQM 455

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +  C P++VTY++L++G  + G  + A++++  +     +PDI SYN  LKGLC  +R 
Sbjct: 456 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARW 512

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA E + + + +   P  +T++IL+ ++   G
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKG 545


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 251/498 (50%), Gaps = 20/498 (4%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F + L  K   P +  +  +++ LVK+     AL++  +M   G+ ++   +NILI+ F 
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G    +  ++ + +++    PN +T+N +I GLC  G   + L   D++       D 
Sbjct: 117 QLGLNSLSFSVFGK-ILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQ 175

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
            +Y + I+GLCK G +  A ++ + +    +  +AV YN +ID  C+A  + + F+L+ +
Sbjct: 176 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ ++   +  + N LI G    G++ EA+ +   +  +N N    T  +L++  CK   
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCK--- 292

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          EG++ +A  ++    K    L+  T NSLM+G+    ++  A  +
Sbjct: 293 ---------------EGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F  M+ +G    V SY T+INGLCK++   EA +  +EM  +   P+++TY+ LI+GL +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             KI   LKL  +   +G  P++  YN ++  LC    V+ A+ L +N+K +   P++ T
Sbjct: 398 LGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 457

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  L+ GL ++G  + A +++  +L +    D+ +Y + ++G C       A   L+   
Sbjct: 458 YTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKME 517

Query: 601 CRGILPTTITWHILVRAV 618
             G +P   T+ I++ ++
Sbjct: 518 DNGCIPNAKTYEIVILSL 535



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 207/424 (48%), Gaps = 20/424 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC K    +A  F + +  +G   D  SYGT+INGL K G +  AL +   +  + V+ N
Sbjct: 150 LCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 209

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN++ID   K      A +++ ++V +  + P+  T N +I G C  G+  E + + 
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RISPDDFTCNSLIYGFCIMGQLKEAVGLL 268

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +M         +T+   +   CK G V+ A+ +    ++  I +D VTYN+++DG+C  
Sbjct: 269 HKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLV 328

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            +I +  ++++ M  +G + NV SY  +I GL +   VDEA++++E +R +    +  T+
Sbjct: 329 KEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTY 388

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GL                  G  G+++    LV+ M   G   N  T NS+++  
Sbjct: 389 NSLIDGL------------------GKLGKISCVLKLVDEMHDRGQPPNIITYNSILDAL 430

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++ AI L   +  +G  P + +Y  LI GLC+  +  +A    +++L KG+  D+
Sbjct: 431 CKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDV 490

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY+++I G C     D AL L  +    G  P+   Y I+I  L    + + A +L   
Sbjct: 491 YTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLRE 550

Query: 529 MKKR 532
           M  R
Sbjct: 551 MIAR 554



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%)

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           SF   +  K   P +I ++ +++ L ++K    AL L  Q    G   D   +NILI+  
Sbjct: 56  SFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCF 115

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              G    +  ++  + K+   PN +T+NTL+ GL   G   +AL   + ++ +    D 
Sbjct: 116 SQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQ 175

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +SY   + GLC   R++ A + L     + + P  + +++++
Sbjct: 176 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    +KA   L +L ++G++PD+Y+Y  +I GL +SG L  A  VF+++  +G   +
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD 489

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y ++I GF  KG +  A  +  ++  +    PN  TY ++I  L +    D   ++ 
Sbjct: 490 VYTYTVMIQGFCVKGLFDAALALLSKM-EDNGCIPNAKTYEIVILSLFEKDENDMAEKLL 548

Query: 230 DRM-KKNEREKDSFTYCSF----IHGLCKAGNV 257
             M  +   ++ S+ Y +     + G+  AG V
Sbjct: 549 REMIARGLLDEKSYIYLASKETGVMGMGAAGTV 581



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 59/130 (45%)

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            K  TP +  +N ++  L  A     AL L+  M+    V +  T+N L++   + G   
Sbjct: 63  HKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNS 122

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +  ++  IL++   P+ I++N  +KGLC    +  A  F +  + +G     +++  L+
Sbjct: 123 LSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLI 182

Query: 616 RAVMNNGAST 625
             +   G  T
Sbjct: 183 NGLCKVGRIT 192


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 228/460 (49%), Gaps = 28/460 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + +KA   +  +  + L PDV++Y  VI+ L K+  +  A+    E FE   E +
Sbjct: 20  LCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI----EFFETMPEPD 75

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           VV YN L+ G  K G   +A  ++    ME   + P+ VTY  +I+  CK  +F+    +
Sbjct: 76  VVTYNTLLGGLCKNGRVAQACSLFGS--MEGAGITPSDVTYTTLIDVFCKMCQFETAYGL 133

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M   +     ++YCS I+GLCK   V+ A +++ EM  +G   D VTYN +I G C 
Sbjct: 134 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 193

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++ E  +L  VM       + +++  LI GL    ++ EA  +++ + ++ C  D  T
Sbjct: 194 KQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 253

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           H VL++ LC    L  A+ ++       E  +     +   + +               G
Sbjct: 254 HTVLVSKLCIRRKLRPALSVVRNYPACPEAVIL-YTPIFRELGRR-------------RG 299

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +A++L       ++M+R+G +P VV+Y     GL   +    AY   + MLE+G +PD
Sbjct: 300 FDRAARL------LQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPD 353

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           M+ Y++L++G C++ ++DMA K+     Q G  P++  YN L+   C  GKVE   +L  
Sbjct: 354 MVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLH 413

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            M  R   P++ T++TL+ GLF+ G  D A    N  + +
Sbjct: 414 TMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQ 453



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 227/477 (47%), Gaps = 57/477 (11%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +F +  + N + Y  L+    + G   +A      +  E  V P+V TYNV+I+ LCK  
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLV-PDVFTYNVVIDTLCKAR 59

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           R    +E ++ M     E D  TY + + GLCK G V  A  ++  M  +GI    VTY 
Sbjct: 60  RISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYT 115

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +ID FC+  + +  + L ++M  + C   V SY  +I GL +N KVD+A  ++E ++  
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA 175

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
            C  D  T+  LI+GLC                   + RL +A  L+  M ++  + +  
Sbjct: 176 GCKPDRVTYNTLIHGLCV------------------KQRLHEAKDLLTVMVENSFQPDKI 217

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK-- 457
           T  +L+ G     +++ A  LF+ M+++GC+P +V++  L++ LC   +   A S V+  
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY 277

Query: 458 -------------------------------EMLEKGWKPDMITYSLLINGLCQSKKIDM 486
                                          +M  +G  P+++TY+    GL   K+   
Sbjct: 278 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMR 337

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A +   + L++G  PD+  YN+L+ G C A +++ A ++   M +    PN+VTYNTL+ 
Sbjct: 338 AYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVG 397

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
              + G  +   E+ + ++    +PD+ +++  + GL    ++  A+ FLN A+ +G
Sbjct: 398 HHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 176/375 (46%), Gaps = 56/375 (14%)

Query: 275 DAVTYNAMIDGFCRAGKI-KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           +A++Y  ++   CR GKI K C  + E+   K   +V +YN++I  L +  ++  AI  +
Sbjct: 9   NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 68

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           E + E     D  T+  L+ GLCKNG                  R+A A SL   M+  G
Sbjct: 69  ETMPE----PDVVTYNTLLGGLCKNG------------------RVAQACSLFGSMEGAG 106

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
              +  T  +L++ F +  + E A  L + M+ + CSPTV SY ++INGLCK  +  +AY
Sbjct: 107 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 166

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
              +EM   G KPD +TY+ LI+GLC  +++  A  L    ++  F PD   +  LI GL
Sbjct: 167 QLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGL 226

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL-------------FKTGDCDKALEI 560
           C+  ++++A  L+  M K+ C P+LVT+  L+  L                  C +A+ +
Sbjct: 227 CTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVIL 286

Query: 561 WNHILEERLR--------------------PDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           +  I  E  R                    P++++Y    KGL        A+      L
Sbjct: 287 YTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRML 346

Query: 601 CRGILPTTITWHILV 615
            +GI P  + +++LV
Sbjct: 347 EQGIEPDMVAYNVLV 361



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 22/278 (7%)

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            ++C  ++ ++  L+  LC+ G ++KA   + E                  M +     +
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAE------------------MAREKLVPD 44

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +T N +++   +A ++  AI  F+ M      P VV+YNTL+ GLCK  R  +A S   
Sbjct: 45  VFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFG 100

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M   G  P  +TY+ LI+  C+  + + A  L      +  +P V  Y  +I+GLC   
Sbjct: 101 SMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNR 160

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           KV+ A QL+  MK   C P+ VTYNTL+ GL       +A ++   ++E   +PD I++ 
Sbjct: 161 KVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFT 220

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
             ++GLC+  R+ +AF        +G  P  +T  +LV
Sbjct: 221 ALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLV 258



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 153/356 (42%), Gaps = 22/356 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           + C+  QFE A   L  +  +   P VYSY ++INGL K+  +  A  +F+EM   G + 
Sbjct: 120 VFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKP 179

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           + V YN LI G   K     AK++   +V E S  P+ +T+  +I GLC   R  E   +
Sbjct: 180 DRVTYNTLIHGLCVKQRLHEAKDLLTVMV-ENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M K     D  T+   +  LC    +  A  V R        V  + Y  +     R
Sbjct: 239 FQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAV--ILYTPIFRELGR 296

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
                    L + M R+G   NVV+Y    +GL +  +   A   +  + E+    D   
Sbjct: 297 RRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + VL++G CK                    RL  A  +V  MD+ G   N  T N+L+  
Sbjct: 357 YNVLVDGFCK------------------ANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 398

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
             +  K+E    L   M  +G  P V +++TL+ GL +V +   AYSF+   + +G
Sbjct: 399 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 15/221 (6%)

Query: 40  LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM 99
           LF  + ++   P LV H   + +L  I++   P   ALSV++ Y   + P+  +      
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLC-IRRKLRP---ALSVVRNY--PACPEAVILYTPIF 291

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
            E        L R+R F++A R L  +  +G+ P+V +Y     GL    + + A   F 
Sbjct: 292 RE--------LGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFR 343

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
            M E+G+E ++V YN+L+DGF  K + +   E   R + ++ + PN+VTYN ++   C+ 
Sbjct: 344 RMLEQGIEPDMVAYNVLVDGFC-KANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRK 402

Query: 220 GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           G+ +   E+   M    R+ D  T+ + + GL + G V+ A
Sbjct: 403 GKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAA 443


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 227/470 (48%), Gaps = 58/470 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC  R+  +A   L S+   G++ DV +YGT+I GL  + +L  AL + DEM   GV+ N
Sbjct: 133 LCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPN 192

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERL--------------------------------- 196
           VV Y+ L+ G+ + G +    +++E +                                 
Sbjct: 193 VVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKD 252

Query: 197 -VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
            +++  + PNVVTYNV+IN LCK G   E L +   M       D  TY + I GL    
Sbjct: 253 MMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312

Query: 256 NVEGAERVYREMVESGIFV--DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVS 312
            ++ A     EM++    V  D VT+N++I G C+ G++ +  ++ E+M  +GC+ N+V+
Sbjct: 313 EMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVT 372

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           YN LI G L   KV  A+++ + L       DS T+ +LING  K   +++A + L    
Sbjct: 373 YNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCT-- 430

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                           M + G K   +    L+    Q   +E A+ LF EM  K C   
Sbjct: 431 ----------------MRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLD 473

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
            ++Y+T+I+G CK          +++ML++G  PD +TYS+LIN   +   ++ A ++  
Sbjct: 474 AIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLK 533

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV--PNLVT 540
           Q    GF PDV +++ LI G  + G+ +  L+L   M+ +N    P +++
Sbjct: 534 QMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 234/481 (48%), Gaps = 28/481 (5%)

Query: 110 LCRK--RQFEKAKRFLNSLWEKG---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
           LCR+      +A+  L  +  +     +P+  SY TV+ GL  S     A+A+   M   
Sbjct: 93  LCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQAS 152

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
           GV  +VV Y  LI G     +   A E+ + +   + V PNVV Y+ ++ G C+ GR+ +
Sbjct: 153 GVRADVVTYGTLIRGLCDASELDAALELLDEMC-GSGVQPNVVVYSCLLRGYCRSGRWQD 211

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++++ M +   + D   +   I  LCK G    A +V   MV+ G+  + VTYN +I+
Sbjct: 212 VGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLIN 271

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC-- 341
             C+ G ++E   L + M  KG   +VV+YN LI GL    ++DEA+S  E + + +   
Sbjct: 272 SLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVV 331

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T   +I+GLCK G + +A+++   + E                   GC  N  T 
Sbjct: 332 EPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE------------------RGCMCNLVTY 373

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N L+ GF++  K++ A+ L  E++  G  P   +Y+ LING  K+     A  F+  M +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G K ++  Y  L+  +CQ   ++ A+ L  + + K    D   Y+ +IHG C +G ++ 
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNE-MDKNCGLDAIAYSTMIHGACKSGDMKT 492

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
             QL  +M      P+ VTY+ L++   K GD ++A  +   +      PD+  ++  +K
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 582 G 582
           G
Sbjct: 553 G 553



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 241/480 (50%), Gaps = 25/480 (5%)

Query: 169 NVVCYNILIDGFFKKG-DYMR-AKEIWERLVMET--SVYPNVVTYNVMINGLCKCGRFDE 224
           + V YN ++    ++G D++R A+ +   +  E   +  PN V+Y  ++ GLC   R  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
            + +   M+ +    D  TY + I GLC A  ++ A  +  EM  SG+  + V Y+ ++ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 285 GFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G+CR+G+ ++  +++E M R+G   +V+ +  LI  L + GK  +A  + +++ ++    
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLV 386
           +  T+ VLIN LCK G + +A+ +  E+++ G                    + +A S +
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 387 NRMDKHGCKL--NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
             M +    +  +  T NS+++G  +  ++  A+ + + M+ +GC   +V+YN LI G  
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           +V +   A + + E+   G +PD  TYS+LING  +  ++D A K  C   Q+G   ++ 
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y  L+  +C  G +E A+ L++ M K NC  + + Y+T++ G  K+GD     ++   +
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
           L+E L PD ++Y++ +        + +A   L      G +P    +  L++     G +
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 200/413 (48%), Gaps = 23/413 (5%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           ++ C     CR  +++   +    +  +G+KPDV  +  +I+ L K G    A  V D M
Sbjct: 195 VYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMM 254

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
            +RG+E NVV YN+LI+   K+G    A  + + +  +  V P+VVTYN +I GL     
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMD-DKGVAPDVVTYNTLIAGLSGVLE 313

Query: 222 FDECLEMWDRMKKNER--EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTY 279
            DE +   + M + +   E D  T+ S IHGLCK G +  A +V   M E G   + VTY
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           N +I GF R  K+K    L + +   G   +  +Y+ILI G  +  +VD A      +R+
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +   A+   +  L+  +C+ G + +A+ + NE                  MDK+ C L+A
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNE------------------MDKN-CGLDA 474

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
              +++++G  ++  ++    L ++M  +G +P  V+Y+ LIN   K+    EA   +K+
Sbjct: 475 IAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQ 534

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           M   G+ PD+  +  LI G     + D  LKL  +   K    D  + + +I 
Sbjct: 535 MTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 169/342 (49%), Gaps = 27/342 (7%)

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENG--KVDEAISIW-ELLR 337
           A+++   R   + E   L   +      + VSYN ++  L   G   + +A S+  ++ R
Sbjct: 56  ALLNRRLRGAPVTEACSLLSAL--PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSR 113

Query: 338 EKNCNA--DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           E +  A  ++ ++  ++ GLC +                   R  +A +L+  M   G +
Sbjct: 114 EAHPAARPNAVSYTTVMRGLCASR------------------RTGEAVALLRSMQASGVR 155

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            +  T  +L+ G   AS+L+ A+ L  EM   G  P VV Y+ L+ G C+  R+ +    
Sbjct: 156 ADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKV 215

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            ++M  +G KPD+I ++ LI+ LC+  K   A K+    +Q+G  P+V  YN+LI+ LC 
Sbjct: 216 FEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCK 275

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE--ERLRPDI 573
            G V +AL L   M  +   P++VTYNTL+ GL    + D+A+     +++    + PD+
Sbjct: 276 EGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDV 335

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++N  + GLC   RM+ A +       RG +   +T++ L+
Sbjct: 336 VTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLI 377



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 135/254 (53%), Gaps = 18/254 (7%)

Query: 380 ADAASLVNRMDK-----HGCKL--------NAYTCNSLMNGFIQ--ASKLENAIFLFKEM 424
           ADAA+L+NR  +       C L        +A + N+++    +     L  A  L  +M
Sbjct: 52  ADAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDM 111

Query: 425 SRKG---CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
           SR+      P  VSY T++ GLC   R GEA + ++ M   G + D++TY  LI GLC +
Sbjct: 112 SREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDA 171

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            ++D AL+L  +    G  P+V +Y+ L+ G C +G+ +D  +++ +M +R   P+++ +
Sbjct: 172 SELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMF 231

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+D L K G   KA ++ + +++  L P++++YN+ +  LC    + +A     +   
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291

Query: 602 RGILPTTITWHILV 615
           +G+ P  +T++ L+
Sbjct: 292 KGVAPDVVTYNTLI 305


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 230/486 (47%), Gaps = 19/486 (3%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G L  A   F E+  RG   ++   +IL++     G    A++++  +    +V P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           Y  MI  LC+ G  D    M   ++++  +    TY   +  LCK+G VE A R+   MV
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVD 327
           E  +    VT+  +I G  R  +  E    L E+ G     N V YN +I      G   
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 328 EAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV---------------- 371
           EA+ +++ +  K       T+ ++   LCK G +  A +IL+E+                
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 372 --EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                G GRL     L+  M     K N     + +    ++ K E A  ++ ++  KG 
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
              V + N LI+GLC+     EA   +K M+  G + D ITY+++I G C++ K+D A++
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L    +++GF PD+  +NI +H  C+ GKVE+ L L   MK     P++VTY T++DG  
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K  D  KA E    +++  LRP+ + YN  + G      +SDA   L+     GI PT +
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 610 TWHILV 615
           T++ L+
Sbjct: 634 TYNSLM 639



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 262/546 (47%), Gaps = 57/546 (10%)

Query: 115 QFEKAKRFLNSLWE-KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           Q + A++    + + K + PDV++Y  +I  L ++G++  A A+  E+   G++  VV Y
Sbjct: 190 QLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTY 249

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N+L+D   K G    A  +  R+V E  V P++VT+ ++I+GL +  +F E   +   M+
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMV-EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQ 308

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 +   Y   I   C+ G+   A +++ EMV  GI    VTYN +    C+ G+++
Sbjct: 309 GFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 368

Query: 294 ECFELWEVMGRKGCL-------NVVSYNI-----------LIRGLL-------------- 321
              ++ + M   G +       +VV++++           LIR +L              
Sbjct: 369 HAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTAC 428

Query: 322 -----ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
                ++GK +EA  IW  +  K    +  T   LI+GLC+   + +A ++L        
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK------- 481

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
                  ++VN     G +L+  T N ++ G  +ASK++ AI L  +M ++G  P + ++
Sbjct: 482 -------AMVNS----GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTF 530

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N  ++  C + +  E    + +M  +G KPD++TY  +I+G C++K +  A +   + ++
Sbjct: 531 NIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMK 590

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P+  +YN LI G    G + DA+ +   MK     P  VTYN+LM  +   G  ++
Sbjct: 591 NGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEE 650

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
              ++   + + +   +I Y I ++G C   ++ +A  +  +   RGI P  +T+  L+ 
Sbjct: 651 VKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMF 710

Query: 617 AVMNNG 622
           A   +G
Sbjct: 711 AYSKSG 716



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 255/597 (42%), Gaps = 100/597 (16%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           +++A G     D A  VF  M +          +      LCR  + + A   L  L   
Sbjct: 181 LVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRS 240

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++P V +Y  +++ L KSG +  A  +   M E  V  ++V + ILI G  +   +   
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + + +     + PN V YN MI   C+ G   E L+++D M     ++   TY     
Sbjct: 301 GAVLQEM-QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAK 359

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAM--------------------------- 282
            LCK G +E AE++  EM+ +G+ V    +N++                           
Sbjct: 360 ALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLK 419

Query: 283 ---------IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
                    I   C++GK +E  E+W +V+G+   +NV + N LI GL +   + EA  +
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            + +       D  T+ ++I G CK   +++AIQ+ ++                  M K 
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDD------------------MIKR 521

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G K + +T N  ++ +    K+E  + L  +M  +G  P +V+Y T+I+G CK +   +A
Sbjct: 522 GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKA 581

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN----- 507
             ++ E+++ G +P+ + Y+ LI G  ++  I  A+ +       G  P    YN     
Sbjct: 582 NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYW 641

Query: 508 ------------------------------ILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
                                         I+I G C  GK+++A+  +  M  R   PN
Sbjct: 642 MCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPN 701

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            +TY TLM    K+G+ ++A ++++ ++   + PD +SYN  + G C    +    E
Sbjct: 702 KMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVE 758



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 246/519 (47%), Gaps = 54/519 (10%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG     L R +QF +    L  +   G+ P+   Y  +I    + G    AL +FDEM 
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM-----ETSVYPNVVTYNVMING-- 215
            +G++  VV YN++     K+G+   A++I + +++       S++ +VV +++   G  
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRL 403

Query: 216 ----------------------------LCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
                                       LCK G+ +E  E+W ++       +  T  + 
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNAL 463

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
           IHGLC+  N++ A +V + MV SG+ +D +TYN MI G C+A K+ E  +L + M ++G 
Sbjct: 464 IHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGF 523

Query: 308 -LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
             ++ ++NI +      GKV+E + + + ++ +    D  T+G +I+G CK   ++KA +
Sbjct: 524 KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 426
            L E                  + K+G + NA   N+L+ G+ +   + +AI +   M  
Sbjct: 584 YLTE------------------LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKY 625

Query: 427 KGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDM 486
            G  PT V+YN+L+  +C      E  +   + + K  +  +I Y+++I G C+  KID 
Sbjct: 626 NGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDE 685

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+    +   +G  P+   Y  L+     +G  E+A +L+  M     VP+ V+YNTL+ 
Sbjct: 686 AVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           G  +    DK +E    +  + L+ D  SYN  + G+ +
Sbjct: 746 GFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITT 784


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 219/411 (53%), Gaps = 20/411 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   + +KA  F +++  +G+  D   YGT+INGL K G  + A  +  EM  + V+ N
Sbjct: 164 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 223

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V YN++ID F K     +A++++ ++V +  + P+++TY  +I G C+ G++ E  ++ 
Sbjct: 224 IVIYNMIIDSFCKDELTCKARDLYLKIV-DMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       + +T+   I   C+ G +  A+ ++  MV+ G   D VT+N +I G C  
Sbjct: 283 CEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLH 342

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G + E  +L++ +  +G L +V SY ILI G  +  ++DEA+S++  +R KN   D   +
Sbjct: 343 GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLY 402

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLCK+G                  R++ A  L + ++  G   N  T N L++ F
Sbjct: 403 SSLIDGLCKSG------------------RISYAWELFSTINNDGPPPNVITYNILIDAF 444

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++  I LFK M  KG +PTV++YN LING CK +R  EA + +  M  K   PD 
Sbjct: 445 CKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDS 504

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
           ITY+ L +GLC+S +I  A +L       G   DV  YN+L+   C A  V
Sbjct: 505 ITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 256/525 (48%), Gaps = 38/525 (7%)

Query: 33  GYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVI-QAYGKNSMPDK 91
           G   +  LF+H++     P ++   + I  +++++  +CP  VA+S++ Q   K   P  
Sbjct: 64  GIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMK--HCP--VAISLLKQMVFKGVTP-- 117

Query: 92  ALDVFQRMNEIFGCEAGILCRKRQFEKAKRF--LNSLWEKGLKPDVYSYGTVINGLVKSG 149
                     IF     I C     E    F  L  + ++G +P+  +  TV+ GL  +G
Sbjct: 118 ---------SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCING 168

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
           ++  A+   D +  +G+  + VCY  LI+G  K G  + A ++ + +  +  V PN+V Y
Sbjct: 169 EVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQV-VKPNIVIY 227

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N++I+  CK     +  +++ ++     + D  TY S I G C+ G     +++  EMV 
Sbjct: 228 NMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVN 287

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
             I  +  T+N +ID FCR GK+ E   ++ +M ++G   ++V++N LI G   +G V E
Sbjct: 288 KNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLE 347

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A  +++ + E+    D  ++ +LI G CK                    R+ +A SL N 
Sbjct: 348 ARKLFDTVFERGILPDVWSYTILIIGYCKCK------------------RIDEAVSLFNE 389

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M      L+    +SL++G  ++ ++  A  LF  ++  G  P V++YN LI+  CK++ 
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD 449

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
                   K M  KG  P ++TY++LING C+SK+I  A+ L      K   PD   YN 
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
           L  GLC +G++ DA +L+  M       ++ TYN L+D   K  D
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 237/512 (46%), Gaps = 20/512 (3%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           A IL      + A    N L      P V  + T+I  +VK      A+++  +M  +GV
Sbjct: 56  AKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV 115

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             ++   +I I+ +   G+   A  +   +V++    PN +T   ++ GLC  G   + +
Sbjct: 116 TPSIFTLSIWINCYCHLGEMGFAFSVLG-IVLKRGYQPNNITLTTVMKGLCINGEVQKAM 174

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           +  D +       D   Y + I+GLCK G    A ++ +EM    +  + V YN +ID F
Sbjct: 175 DFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSF 234

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+     +  +L+  +   G   ++++Y  LIRG    G+  E   +   +  KN N + 
Sbjct: 235 CKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 294

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T  VLI+  C+                  +G++ +A  + N M K G + +  T N+L+
Sbjct: 295 YTFNVLIDAFCR------------------KGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 336

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G      +  A  LF  +  +G  P V SY  LI G CK +R  EA S   EM  K   
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D++ YS LI+GLC+S +I  A +L       G  P+V  YNILI   C    ++  ++L
Sbjct: 397 LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIEL 456

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M  +   P ++TYN L++G  K+    +A+ + + +  + L PD I+YN    GLC 
Sbjct: 457 FKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCK 516

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             R+SDA+E        G      T+++L+ A
Sbjct: 517 SGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 232/470 (49%), Gaps = 20/470 (4%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+ +F+ +       +V+ +N +I    K      A  + +++V +  V P++ T ++ I
Sbjct: 68  AVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFK-GVTPSIFTLSIWI 126

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G       +   + K   + ++ T  + + GLC  G V+ A   +  +   G+ 
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           +D V Y  +I+G C+ G+  + F+L + M G+    N+V YN++I    ++    +A  +
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  + +   + D  T+  LI G C+ G   +  Q++ E              +VN+    
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE--------------MVNK---- 288

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               N YT N L++ F +  K+  A  +F  M ++G  P +V++NTLI+G C      EA
Sbjct: 289 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 348

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                 + E+G  PD+ +Y++LI G C+ K+ID A+ L  +   K    D+ +Y+ LI G
Sbjct: 349 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 408

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           LC +G++  A +L+S +      PN++TYN L+D   K  D D  +E++  +  + L P 
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +++YNI + G C   R+ +A   L+    + + P +IT++ L   +  +G
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG 518



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
           RL  A     R   H  K NA   +S  NG      +++A+ LF  +      P+V+ +N
Sbjct: 36  RLRYAFHKFLRFFSHCPKQNAKILSSF-NG------IDDAVTLFNHLINMQPLPSVIQFN 88

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           T+I  + K++    A S +K+M+ KG  P + T S+ IN  C   ++  A  +    L++
Sbjct: 89  TIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKR 148

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G+ P+      ++ GLC  G+V+ A+  + N+  +  + + V Y TL++GL K G    A
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 208

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            ++   +  + ++P+I+ YN+ +   C       A +     +  GI P  +T+  L+R 
Sbjct: 209 FQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRG 268

Query: 618 VMNNG 622
               G
Sbjct: 269 FCRTG 273



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 59/141 (41%)

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
           ID A+ L    +     P V  +N +I  +        A+ L   M  +   P++ T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            ++     G+   A  +   +L+   +P+ I+    +KGLC    +  A +F ++   +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 604 ILPTTITWHILVRAVMNNGAS 624
           +L   + +  L+  +   G S
Sbjct: 185 MLLDEVCYGTLINGLCKIGRS 205


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 248/490 (50%), Gaps = 28/490 (5%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           AL  F  M        ++ +N ++D F K   Y     +  RL ++ ++ P+  T N++I
Sbjct: 47  ALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELK-AIQPDFFTLNILI 105

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           N  C  G+ +    +  ++ K   + D+ T  + I GLC  G V+ A   + +++  G  
Sbjct: 106 NCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFR 165

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISI 332
           +D V+Y  +I+G C+ G+ +   +L   + GR    NVV YN +I  L +   V EA ++
Sbjct: 166 LDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNL 225

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------------- 375
           +  +  K  +A+  T+  +I+G C  G L +A+  LNE+                     
Sbjct: 226 FSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHK 285

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           EG++ +A +++  + K   K N  T N+L++G+  A  + NA+ L       G +P V S
Sbjct: 286 EGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--AKHVFNAVGLM------GVTPDVWS 337

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN +IN LCK++R  EA +  KEM +K   P+ +TY+ LI+GLC+S +I  A  L  +  
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD-C 554
            +G   +V  YN LI+GLC  G+++ A+ L + MK +   P++ T N L+ GL   G   
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRL 457

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             A  ++  +L++   P++ +YNI + G C    + +A+   +     G  P  IT+ I+
Sbjct: 458 KNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517

Query: 615 VRAVMNNGAS 624
           + A++  G +
Sbjct: 518 ICALLEKGET 527



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 250/520 (48%), Gaps = 43/520 (8%)

Query: 41  FHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMN 100
           FH +L     P  ++  ++IL+     K Y P  V+LS  +   K   PD     F  +N
Sbjct: 51  FHRMLCMRHTPP-IIQFNKILDSFAKMKHY-PTVVSLSR-RLELKAIQPD-----FFTLN 102

Query: 101 EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
            +  C     C   Q   A   L+ + + G +PD  +  T+I GL   G +  AL   D+
Sbjct: 103 ILINC----FCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDK 158

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           +  +G   + V Y  LI+G  K G+   A ++  R+    +  PNVV YN +I+ LCK  
Sbjct: 159 LLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLT-EPNVVMYNTIIDCLCKRK 217

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
              E   ++  M       +  TY + IHG C  G +  A     EMV   I  D   YN
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLRE 338
            ++D   + GK+KE   +  V+  K CL  NV++YN LI G         A  ++  +  
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVI-VKTCLKPNVITYNTLIDGY--------AKHVFNAVGL 328

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
                D  ++ ++IN LCK          +  VEE        A +L   M +     N 
Sbjct: 329 MGVTPDVWSYNIMINRLCK----------IKRVEE--------ALNLYKEMHQKNMVPNT 370

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
            T NSL++G  ++ ++  A  L  EM  +G    V++YN+LINGLCK  +  +A + + +
Sbjct: 371 VTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINK 430

Query: 459 MLEKGWKPDMITYSLLINGL-CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           M ++G +PDM T ++L++GL C+ K++  A  L    L KG+ P+V  YNI+I+G C  G
Sbjct: 431 MKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEG 490

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            +++A  L S M+   C PN +T+  ++  L + G+ DKA
Sbjct: 491 LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKA 530



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 246/518 (47%), Gaps = 43/518 (8%)

Query: 90  DKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSG 149
           +K LD F +M              + +         L  K ++PD ++   +IN     G
Sbjct: 67  NKILDSFAKM--------------KHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLG 112

Query: 150 DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTY 209
            +  A +V  ++ + G + + V    LI G   KG   +A    ++L+ +     + V+Y
Sbjct: 113 QINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ-GFRLDQVSY 171

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
             +ING+CK G     +++  R+     E +   Y + I  LCK   V  A  ++ EM  
Sbjct: 172 GTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSV 231

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            GI  + VTY+A+I GFC  GK+ E       M  K    +V  YN L+  L + GKV E
Sbjct: 232 KGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKE 291

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A ++  ++ +     +  T+  LI+G  K+ +                          N 
Sbjct: 292 AKNVLAVIVKTCLKPNVITYNTLIDGYAKHVF--------------------------NA 325

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           +   G   + ++ N ++N   +  ++E A+ L+KEM +K   P  V+YN+LI+GLCK  R
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A+  + EM ++G   ++ITY+ LINGLC++ ++D A+ L  +   +G  PD+   NI
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNI 445

Query: 509 LIHGL-CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           L+HGL C   ++++A  L+ ++  +   PN+ TYN ++ G  K G  D+A  + + + + 
Sbjct: 446 LLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDS 505

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
              P+ I++ I +  L        A + L + + RG+L
Sbjct: 506 GCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 249/492 (50%), Gaps = 36/492 (7%)

Query: 36  HSPHL--FHHILRRLIDPK---LVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPD 90
           H+P +  F+ IL      K    VV +SR LEL  IQ  +   ++ ++     G+ ++  
Sbjct: 59  HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118

Query: 91  KALDV-----FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
             L       +Q            LC K Q +KA  F + L  +G + D  SYGT+ING+
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
            K G+   A+ +   +  R  E NVV YN +ID   K+     A  ++  + ++  +  N
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVK-GISAN 237

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           VVTY+ +I+G C  G+  E L   + M       D + Y + +  L K G V+ A+ V  
Sbjct: 238 VVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLA 297

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGK 325
            +V++ +  + +TYN +IDG+      K  F    +MG     +V SYNI+I  L +  +
Sbjct: 298 VIVKTCLKPNVITYNTLIDGYA-----KHVFNAVGLMGVTP--DVWSYNIMINRLCKIKR 350

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE--------- 376
           V+EA+++++ + +KN   ++ T+  LI+GLCK+G ++ A  +++E+ + G          
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNS 410

Query: 377 --------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI-QASKLENAIFLFKEMSRK 427
                   G+L  A +L+N+M   G + + YT N L++G + +  +L+NA  LF+++  K
Sbjct: 411 LINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDK 470

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P V +YN +I G CK     EAY+   +M + G  P+ IT+ ++I  L +  + D A
Sbjct: 471 GYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKA 530

Query: 488 LKLCCQFLQKGF 499
            KL C+ + +G 
Sbjct: 531 EKLLCEMIARGL 542



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 103/204 (50%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +++A+F F  M     +P ++ +N +++   K++ +    S  + +  K  +PD  T ++
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C   +I++A  +  + L+ G+ PD      LI GLC  G+V+ AL  +  +  + 
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
              + V+Y TL++G+ K G+   A+++   I      P+++ YN  +  LC    +S+A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 594 EFLNDALCRGILPTTITWHILVRA 617
              ++   +GI    +T+  ++  
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHG 247


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 265/553 (47%), Gaps = 26/553 (4%)

Query: 93  LDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLL 152
           LDV ++ N +F     +       E A        + G++ ++ S   ++  LV+   + 
Sbjct: 130 LDV-EKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVD 188

Query: 153 GALAVFDEMFERGVETNVVCYNILIDGFFKKG-----DYMRAKEIWERLVMETSVYPNVV 207
           G   +F+ + + G   N+  Y I+++ FF +G     D  RA EI  ++ M     PNVV
Sbjct: 189 GVRLLFEVLIKFGPRPNIHTYTIMMN-FFCRGVGCSVDIRRASEILGKIYMSGET-PNVV 246

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TY   I GLCK G F     +   + +  +  ++  + + I+GLC+ G ++ A  V++EM
Sbjct: 247 TYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM 306

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
             SGI  D  +Y+ +IDGFCR G++ +  E+++ M   G L N+ SY+ILI G  + G+V
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----------- 375
           D+A+ ++E ++      D  ++ +LI+G C+ G ++ AI+   E+               
Sbjct: 367 DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 426

Query: 376 ------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                   + A+A      M K G   +   CN +++ + +      A+ L ++    G 
Sbjct: 427 IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGV 486

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
                SYN  I+ +C+     +A   +  ML++   PD++ YS LI+   +    + A+ 
Sbjct: 487 HFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVM 546

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +  + G T +V  Y ILI+   S  K++ A +L+  MK+    P+ + Y +L+ G  
Sbjct: 547 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 606

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
            TG+  +A  +++ +  E   P++++Y   +      ++ + A +       RG+ P  I
Sbjct: 607 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 666

Query: 610 TWHILVRAVMNNG 622
            + +L+ A  N G
Sbjct: 667 LYTMLIAAFCNTG 679



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 221/466 (47%), Gaps = 28/466 (6%)

Query: 102 IFG-CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
           I+G C+ GIL      ++A      +   G+ PDVYSY  +I+G  + G +  A  VF E
Sbjct: 287 IYGLCQGGIL------DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE 340

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           M   G+  N+  Y+ILIDGF K+G   +A E++E +   + + P+V +Y+++I+G C+ G
Sbjct: 341 MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM-KNSGILPDVYSYSILIDGFCRKG 399

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             D  ++ W+ M  N     +F YCS I G  K+     A + +R M + G++ D +  N
Sbjct: 400 DMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACN 459

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++  +CR     +   L E     G   N  SYN  I  +      ++A+ +  ++ ++
Sbjct: 460 HILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKR 519

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
           N   D   +  LI+   K     KA+                   L  +M K G   N  
Sbjct: 520 NVLPDVVNYSTLISCFAKRLNSEKAVM------------------LFIKMTKVGITFNVK 561

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T   L+N FI   K++ A  LFK M      P  ++Y +L+ G C       A +   EM
Sbjct: 562 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
             +G  P+++TY+  IN   +  K + A KL  +  ++G  PD  +Y +LI   C+ G++
Sbjct: 622 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEM 681

Query: 520 EDALQLYSNMKKR-NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
             A  L+  MK+   C PN+V Y  L++   K    D+A +++  +
Sbjct: 682 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 727



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 264/572 (46%), Gaps = 32/572 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE------IFGCEAGILC--RKRQFEKAKRFLNSLWEKG 130
           +I+ +  NSM + A  VF R  +      I  C   + C     + +  +     L + G
Sbjct: 142 LIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFG 201

Query: 131 LKPDVYSYGTVIN----GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
            +P++++Y  ++N    G+  S D+  A  +  +++  G   NVV Y   I G  K G +
Sbjct: 202 PRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLF 261

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  + + L  +     N   +N +I GLC+ G  DE  E++  MK +    D ++Y  
Sbjct: 262 GVAWRLIQNLCRKNQPLNNHC-FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSI 320

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I G C+ G V+ A  V++EM  SGI  +  +Y+ +IDGFC+ G++ +  E++E M   G
Sbjct: 321 LIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSG 380

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            L +V SY+ILI G    G +D AI  WE +   N +  +  +  LI G  K+     A+
Sbjct: 381 ILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANAL 440

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           +    +++ G                 +     A +L  +  ++G   N Y+ N  ++  
Sbjct: 441 KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRI 500

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + S  E A+ L   M ++   P VV+Y+TLI+   K     +A     +M + G   ++
Sbjct: 501 CRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNV 560

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY++LIN      K+D+A +L     +    PD   Y  L+ G C+ G++  A  L+  
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M +  C PN+VTY   ++   K    ++A +++  + E  + PD I Y + +   C+   
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGE 680

Query: 589 MSDAFEFLNDALCRG-ILPTTITWHILVRAVM 619
           M+ A    ++    G   P  + +  L+ + +
Sbjct: 681 MNRAEALFDEMKQEGRCTPNVVMYTCLINSYI 712



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 237/501 (47%), Gaps = 28/501 (5%)

Query: 134 DVYSYGTVINGLVK---SGDLL-GALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           DV     V + L+K   S  +L  A  VF    + G+E N++  N L+    +       
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCK---CG-RFDECLEMWDRMKKNEREKDSFTYC 245
           + ++E L+ +    PN+ TY +M+N  C+   C        E+  ++  +    +  TY 
Sbjct: 191 RLLFEVLI-KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYG 249

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           ++I GLCK G    A R+ + +      ++   +NA+I G C+ G + E  E+++ M   
Sbjct: 250 TYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNS 309

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G L +V SY+ILI G    G+VD+A  +++ +R      +  ++ +LI+G CK G ++KA
Sbjct: 310 GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKA 369

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
           +++  E                  M   G   + Y+ + L++GF +   +++AI  ++EM
Sbjct: 370 LEVFEE------------------MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
           +    SP+  +Y +LI G  K ++F  A    + M + G  PD I  + +++  C+    
Sbjct: 412 TSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           + AL L  +F + G   +   YN  IH +C     E ALQL   M KRN +P++V Y+TL
Sbjct: 472 NKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
           +    K  + +KA+ ++  + +  +  ++ +Y I +    S  +M  A+          +
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591

Query: 605 LPTTITWHILVRAVMNNGAST 625
            P  I +  LV    N G  T
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMT 612



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 178/410 (43%), Gaps = 62/410 (15%)

Query: 79  VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKG 130
           +I  + K    DKAL+VF+ M       +++     I   CRK   + A +F   +    
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             P  ++Y ++I G  KS     AL  F  M + G+  + +  N ++  + +K D+ +A 
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            + E+   E  V+ N  +YN  I+ +C+    ++ L++   M K     D   Y + I  
Sbjct: 476 ALSEKF-QENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISC 534

Query: 251 LCKAGNVEGA-----------------------------------ERVYREMVESGIFVD 275
             K  N E A                                    R+++ M ES ++ D
Sbjct: 535 FAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPD 594

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWE 334
            + Y +++ GFC  G++     L++ M R+GC  NVV+Y   I   L+  K ++A  ++E
Sbjct: 595 QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 654

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            ++E+    D   + +LI   C  G +N+A  + +E+++  EGR      +         
Sbjct: 655 KMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQ--EGRCTPNVVM--------- 703

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
               YTC  L+N +I+ +K + A  L++EM  KG S    S  ++    C
Sbjct: 704 ----YTC--LINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 10/319 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +CR    EKA + L  + ++ + PDV +Y T+I+   K  +   A+ +F +M + G+  N
Sbjct: 500 ICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFN 559

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y ILI+ F        A  +++ +  E+ VYP+ + Y  ++ G C  G       ++
Sbjct: 560 VKTYTILINLFISDCKMDVAYRLFKGM-KESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +     +  TY  FI+   K      A ++Y +M E G++ D + Y  +I  FC  
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 290 GKIKECFELWEVMGRKG--CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G++     L++ M ++G    NVV Y  LI   ++  K D+A  ++E +R K  +   ++
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSS 738

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            G +    C    + K  ++    ++G + R     +L+   D  GC  +A   +     
Sbjct: 739 EGSVSESWCCRHQVLKTGKLGGRAKQGLDWRFQVKYTLLP--DSCGCA-HAQIHDFYTRP 795

Query: 408 FIQASKLENAIFLFKEMSR 426
           F+Q    EN IF    + +
Sbjct: 796 FMQ----ENNIFTISHVGK 810


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 252/513 (49%), Gaps = 25/513 (4%)

Query: 115 QFEKAKRFLNSLW---EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +F +   F  +LW   E    PD  +  +++NGLV+          +  M  RG+  +V 
Sbjct: 141 EFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y +L    FK+G Y + +++ + +     + PNV  Y + I  LC+  + +E  +M++ 
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMT-SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MKK+    + +TY + I G CK GNV  A  +Y+E++ + +  + V +  ++DGFC+A +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +     L+  M + G   N+  YN LI G  ++G + EA+ +   +   N + D  T+ +
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LINGLC                   E ++A+A  L  +M       ++ T NSL++G+ +
Sbjct: 380 LINGLCI------------------EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              +E A+ L  EM+  G  P +++++TLI+G C V     A     EM  KG  PD++T
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS-NM 529
           Y+ LI+   +   +  AL+L    L+ G  P+   +  L+ G    G++  A+  Y  N 
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           ++R+C  N V +  L++GL + G   +A   ++ +    + PDI SY   LKG     R+
Sbjct: 542 QQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +D      D +  GILP  +   +L R    NG
Sbjct: 601 TDTMMLQCDMIKTGILPNLLVNQLLARFYQANG 633



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 209/429 (48%), Gaps = 21/429 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + E+A++    + + G+ P++Y+Y  +I+G  K+G++  A  ++ E+    +  N
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +  L+DGF K  + + A+ ++  +V +  V PN+  YN +I+G CK G   E + + 
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMV-KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      D FTY   I+GLC    V  A R++++M    IF  + TYN++I G+C+ 
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +++  +L   M   G   N+++++ LI G      +  A+ ++  +  K    D  T+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+   K   + +A+++ +++ E G                     N +T   L++GF
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAG------------------IHPNDHTFACLVDGF 524

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L  AI  ++E +++      V +  LI GLC+      A  F  +M   G  PD+
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            +Y  ++ G  Q K+I   + L C  ++ G  P++ +  +L     + G V+ A  L +N
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL-TN 643

Query: 529 MKKRNCVPN 537
             +   V N
Sbjct: 644 SSRLKTVSN 652



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 195/427 (45%), Gaps = 23/427 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +++LI  F + G +  A  +W    M+ S  P+      ++NGL +  RFD     +  M
Sbjct: 135 FSLLIMEFLEMGLFEEA--LWVSREMKCS--PDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  D   Y        K G     E++  EM   GI  +   Y   I   CR  K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E  +++E+M + G L N+ +Y+ +I G  + G V +A  +++ +       +    G L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++G CK                     L  A SL   M K G   N Y  N L++G  ++
Sbjct: 311 VDGFCK------------------ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A+ L  EM     SP V +Y  LINGLC  ++  EA    ++M  +   P   TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+G C+   ++ AL LC +    G  P++  ++ LI G C+   ++ A+ LY  M  
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +  VP++VTY  L+D  FK  +  +AL +++ +LE  + P+  ++   + G     R+S 
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532

Query: 592 AFEFLND 598
           A +F  +
Sbjct: 533 AIDFYQE 539



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 190/419 (45%), Gaps = 22/419 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           ++  ++++I    + G F+E L +   MK +    DS    S ++GL +    +     Y
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDY 187

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           + M+  G+  D   Y  +     + G   +  +L + M   G   NV  Y I I  L  +
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            K++EA  ++EL+++     +  T+  +I+G CK G + +A  +  E+           A
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL---------VA 298

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L+          N     +L++GF +A +L  A  LF  M + G  P +  YN LI+G 
Sbjct: 299 ELLP---------NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           CK     EA   + EM      PD+ TY++LINGLC   ++  A +L  +   +   P  
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN LIHG C    +E AL L S M      PN++T++TL+DG     D   A+ ++  
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  + + PD+++Y   +      + M +A    +D L  GI P   T+  LV      G
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 31/359 (8%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +FG      C+ R+   A+     + + G+ P++Y Y  +I+G  KSG++L A+ +  EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
               +  +V  Y ILI+G   +     A  +++++  E  ++P+  TYN +I+G CK   
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYN 424

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            ++ L++   M  +  E +  T+ + I G C   +++ A  +Y EM   GI  D VTY A
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +ID   +   +KE   L+  M   G   N  ++  L+ G  + G++  AI  ++   ++ 
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
              +      LI GLC+NGY+ +A +  +                    D   C +    
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFS--------------------DMRSCGITPDI 584

Query: 401 CN--SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           C+  S++ G +Q  ++ + + L  +M + G  P     N L+N L  + RF +A  +VK
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP-----NLLVNQL--LARFYQANGYVK 636


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 235/466 (50%), Gaps = 18/466 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F ++  R  +     YN +I     +G Y +  E++  +  E   +P+ +TY+ +I
Sbjct: 178 AIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALI 237

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +  CK GR D   ++ + MK+N  +  +  Y   I    K  +V GA  ++ EM      
Sbjct: 238 SAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCR 297

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D  TY  +I G  +AG+I E +  +  M R+GC  + V  N +I  L + G++D+A+ +
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKL 357

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           ++ +    C     T+  +I  L ++                 + R ++  S   RM + 
Sbjct: 358 FQEMGTLRCIPSVVTYNTIIKALFES-----------------KSRASEVPSWFERMKES 400

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   +++T + L++GF + +++E A+ L +EM  KG  P   +Y +LI+ L K +R+  A
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               +E+ E         Y+++I  L ++ ++D A+ +  +  + G  PDV  YN L+ G
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           L   G +++AL     M++  C+P++ +YN +++GL KTG   +A+E+ +++ +  +RPD
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 580

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           ++SYN  L  L       +A + + +    G     IT+  ++ A+
Sbjct: 581 VVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 21/422 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER-EKDSFTYCSFIHGLCKAGNVEGAER 262
           P    YN MI  L   G++ +  E+++ M        D+ TY + I   CK G  + A +
Sbjct: 192 PTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQ 251

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLL 321
           +  EM E+G+      Y  +I  F +   +     L+E M  + C  +V +Y  LIRGL 
Sbjct: 252 LLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLG 311

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
           + G++DEA   +  ++ + C  D+     +IN L                  G  GRL D
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFL------------------GKAGRLDD 353

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQA-SKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           A  L   M    C  +  T N+++    ++ S+       F+ M   G SP+  +Y+ LI
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILI 413

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  R  +A   ++EM EKG+ P    Y  LI+ L ++K+ D+A +L  +  +   +
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
               +Y ++I  L  AG+++DA+ ++  M K  C P++  YN LM GL +TG  D+AL  
Sbjct: 474 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              + E    PDI SYNI L GL        A E L++     + P  ++++ ++ A+ +
Sbjct: 534 MRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSH 593

Query: 621 NG 622
            G
Sbjct: 594 AG 595



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 28/357 (7%)

Query: 94  DVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLG 153
           DVF     I G     L +  + ++A  F   +  +G +PD      +IN L K+G L  
Sbjct: 299 DVFTYTELIRG-----LGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD 353

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI--WERLVMETSVYPNVVTYNV 211
           A+ +F EM       +VV YN +I   F+     RA E+  W   + E+ + P+  TY++
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKS--RASEVPSWFERMKESGISPSSFTYSI 411

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I+G CK  R ++ + + + M +         YCS I  L KA   + A  +++E+ E+ 
Sbjct: 412 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
               A  Y  MI    +AG++ +   +++ M + GC  +V +YN L+ GL   G +DEA+
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
           S    ++E  C  D  ++ +++NGL K G  ++A+++L+                   M 
Sbjct: 532 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSN------------------MK 573

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVE 447
           +   + +  + N+++     A   E A  L +EM+  G    +++Y++++  + KV+
Sbjct: 574 QSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVD 630



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 35/191 (18%)

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           R+       +Y  LI  L  VE++GE +  ++EM+               N +C      
Sbjct: 116 RRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVR--------------NPICV----- 156

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
                         TP  T  + ++  L +A  V  A+ ++  +K R C P    YN+++
Sbjct: 157 -------------VTP--TELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMI 201

Query: 546 DGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
             L   G   K  E++N +  E    PD ++Y+  +   C   R   A + LN+    G+
Sbjct: 202 IMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGM 261

Query: 605 LPTTITWHILV 615
            PTT  + +L+
Sbjct: 262 QPTTKIYTMLI 272


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 255/539 (47%), Gaps = 63/539 (11%)

Query: 90  DKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           D ALD + +M  +        F    GI+ + + +  A   +  +   G+KP+V ++  V
Sbjct: 8   DVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIV 67

Query: 142 INGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
           IN L +    +   +V   MF+ GVE                                  
Sbjct: 68  INCLCRLNHTVFGFSVLGLMFKIGVE---------------------------------- 93

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P++VT+  ++NGLC  G   + +   D +K    E D +T  + I+GLCK G+   A 
Sbjct: 94  --PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAAL 151

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGL 320
              ++M E    +D   Y+A++DG C+ G + E  +L+  M  KG   N+ +YN LI GL
Sbjct: 152 SYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGL 211

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
               +  EA  +   +  K    D  T  V+     K G +++A                
Sbjct: 212 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRA---------------- 255

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
              S+ + M   G + N  T NS++      +++++A+ +F  M RKGC P +V+YN+LI
Sbjct: 256 --KSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLI 313

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G C+ +   +A  F+ EM+  G  PD++T+S LI G C++ K   A +L     + G  
Sbjct: 314 HGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQL 373

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           PD+    I++ GL       +A+ L+  ++K N   +++ Y+ +++G+  +G  + ALE+
Sbjct: 374 PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALEL 433

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++++  + ++ D+++YNI + GLC    + DA + L      G  P   T+++ V+ ++
Sbjct: 434 FSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 492



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 217/453 (47%), Gaps = 21/453 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +    +A RF++ L + G + D Y+ G +INGL K G    AL+   +M E+    +
Sbjct: 106 LCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLD 165

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y+ ++DG  K G    A +++ ++  +  + PN+ TYN +I+GLC   R+ E   + 
Sbjct: 166 VTAYSAVVDGLCKDGMVFEALDLFSQMTGK-GIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     D  T+        K G +  A+ ++  M   GI  + VTYN++I   C  
Sbjct: 225 ANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCML 284

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++K+  E++++M RKGCL N+V+YN LI G  E   +++A+     +     + D  T 
Sbjct: 285 NQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTW 344

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI G CK                   G+   A  L   M KHG   +  TC  +++G 
Sbjct: 345 STLIGGFCK------------------AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGL 386

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +      A+ LF+E+ +      ++ Y+ ++NG+C   +  +A      +  KG K D+
Sbjct: 387 FKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDV 446

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+++INGLC+   +D A  L  +  + G  PD   YN+ + GL    ++  + +    
Sbjct: 447 VTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMF 506

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           MK +    N  T   L++  F     ++A +++
Sbjct: 507 MKGKGFRANATTTKLLIN-YFSANKENRAFQVF 538



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 227/478 (47%), Gaps = 22/478 (4%)

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           VKS D+  AL  + +M        V  +N+L     K   Y  A  + + +     V PN
Sbjct: 4   VKSVDV--ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSY-IGVKPN 60

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           V T+N++IN LC+         +   M K   E    T+ + ++GLC  GNV  A R   
Sbjct: 61  VSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVD 120

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
            + + G   D  T  A+I+G C+ G         + M  + C L+V +Y+ ++ GL ++G
Sbjct: 121 HLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDG 180

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            V EA+ ++  +  K    +  T+  LI+GLC                     R  +AA 
Sbjct: 181 MVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCN------------------FDRWKEAAP 222

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           L+  M + G   +  T N +   F++   +  A  +F  M   G    VV+YN++I   C
Sbjct: 223 LLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHC 282

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
            + +  +A      M+ KG  P+++TY+ LI+G C++K ++ A+    + +  G  PDV 
Sbjct: 283 MLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVV 342

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            ++ LI G C AGK   A +L+  M K   +P+L T   ++DGLFK     +A+ ++  +
Sbjct: 343 TWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFREL 402

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +     DII Y+I L G+CS  +++DA E  +    +G+    +T++I++  +   G
Sbjct: 403 EKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEG 460



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 202/449 (44%), Gaps = 29/449 (6%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           +++   ++N L  E N   A+   D   ++ GY    +    I+  L            L
Sbjct: 96  IVTFTTIVNGLCVEGNVAQAIRFVDH-LKDMGYESDRYTRGAIINGLCKVGHSSAALSYL 154

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRK 113
           + +E Q C        +V+    K+ M  +ALD+F +M           + C    LC  
Sbjct: 155 KKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNF 214

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            ++++A   L ++  KG+ PDV ++  +    +K+G +  A ++F  M   G+E NVV Y
Sbjct: 215 DRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTY 274

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N +I           A E+++ L++     PN+VTYN +I+G C+    ++ +     M 
Sbjct: 275 NSIIGAHCMLNQMKDAMEVFD-LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMV 333

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            N  + D  T+ + I G CKAG    A+ ++  M + G   D  T   ++DG  +     
Sbjct: 334 NNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHS 393

Query: 294 ECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   L+ E+      L+++ Y+I++ G+  +GK+++A+ ++  L  K    D  T+ ++I
Sbjct: 394 EAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 453

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           NGLCK                  EG L DA  L+ +M+++GC  +  T N  + G ++  
Sbjct: 454 NGLCK------------------EGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRY 495

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           ++  +      M  KG      +   LIN
Sbjct: 496 EISKSTKYLMFMKGKGFRANATTTKLLIN 524


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 232/472 (49%), Gaps = 21/472 (4%)

Query: 138 YGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV 197
           Y  ++N  V S     AL     M   G       +N L+    +   + +A  I+   V
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN--V 149

Query: 198 METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV 257
           +++ V  N  ++ +MI G C+ G F     +   +++     +   Y + I G CK G+V
Sbjct: 150 LKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNIL 316
             A+ ++ +M   G+  +  TY+ +++GF + G  +E F+++E M R G + N  +YN L
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE 376
           I     +G VD+A  ++  +REK       T+ +LI GLC+                   
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK----------------- 312

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
            +  +A  LV++++K G   N  T N L+NGF    K++ A+ LF ++   G SPT+V+Y
Sbjct: 313 -KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           NTLI G  KVE    A   VKEM E+      +TY++LI+   +    D A ++     +
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEK 431

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PDV  Y++LIHG C  G +++A + + ++ + +  PN V YNT++ G  K G   +
Sbjct: 432 SGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
           AL + N ++   + P++ S+  T+  LC   +  +A   L   +  G+ P+ 
Sbjct: 492 ALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSV 543



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 243/569 (42%), Gaps = 80/569 (14%)

Query: 1   MVISAKRLLNLLKAEKNPHT-ALALFDSATREPGYAHSPHLFHHILRRLIDPKLV----- 54
           M  S K L+ + K  K P    L LF++A+ + G  H+ H    IL  L+   ++     
Sbjct: 1   MSQSHKALILIQKMVKVPPIKTLLLFNTASYQ-GLHHTSHSISFILNHLLSSGMLPQAQS 59

Query: 55  ---------VHVSRILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRM---- 99
                    +  S +L+L +     C     L  +++ AY  +   D+AL     M    
Sbjct: 60  LILRLISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEG 119

Query: 100 ----NEIFGCEAGILCRKRQFEKA----------------------------------KR 121
               +  F     +L R   F+KA                                   R
Sbjct: 120 HAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFR 179

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
            L  L E GL P+V  Y T+I+G  K+GD++ A  +F +M   G+  N   Y++L++GFF
Sbjct: 180 LLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFF 239

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+G      +++E +   + + PN   YN +I+  C  G  D+  +++  M++       
Sbjct: 240 KQGLQREGFQMYENM-NRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGV 298

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY   I GLC+      A ++  ++ + G+  + VTYN +I+GFC  GK+     L+  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ 358

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           +   G    +V+YN LI G  +   +  A+ + + + E+       T+ +LI+   +  Y
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNY 418

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
            +KA +                  + + M+K G   + YT + L++G      ++ A   
Sbjct: 419 TDKACE------------------MHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKP 460

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           FK +      P  V YNT+I+G CK      A   + EM+  G  P++ ++   +  LC+
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR 520

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            +K   A  L  Q +  G  P V++Y ++
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 177/379 (46%), Gaps = 18/379 (4%)

Query: 244 YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMG 303
           Y + ++    + + + A      M+  G    + T+N ++    R+    + + ++ V+ 
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151

Query: 304 RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            K  LN  S+ I+I G  E G       +  +L E   + +   +  LI+G CKNG    
Sbjct: 152 SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNG---- 207

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                          +  A +L  +MD+ G   N +T + LMNGF +         +++ 
Sbjct: 208 --------------DVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYEN 253

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M+R G  P   +YN LI+  C      +A+    EM EKG    ++TY++LI GLC+ KK
Sbjct: 254 MNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
              A+KL  +  + G +P++  YNILI+G C  GK++ A++L++ +K     P LVTYNT
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L+ G  K  +   AL++   + E  +    ++Y I +      +    A E  +     G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSG 433

Query: 604 ILPTTITWHILVRAVMNNG 622
           ++P   T+ +L+     NG
Sbjct: 434 LVPDVYTYSVLIHGXCVNG 452


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 214/403 (53%), Gaps = 25/403 (6%)

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
           + + G  ++ L+++ R    +    S TY   I G C A +++ A  + REM   G+  +
Sbjct: 1   MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGR--KGCLNVVSYNILIRGLLENGKVDEAISIW 333
             T + ++ G CR G++ +  E ++          +VVSY  LI GL + G+VD A  ++
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 334 -ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
            +++    C  ++ T+  L++GLCK   L+ A  ++ E                    K 
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEAR------------------KR 161

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               +  T N+LM    Q  +++ A+  F +M+ +G  PT+VS+N +I GLC+  R  +A
Sbjct: 162 DFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADA 221

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
                EM+++ + P+++TYS++I+GLC+S ++D A +L  + + +G  PD+  Y  L+ G
Sbjct: 222 LEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 281

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
             +AG+++ AL L   M  + C+P++VTY  ++D L K G  D A EI+  ++  +  P+
Sbjct: 282 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPN 341

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +++Y+  + G C  SR+ +  + + +  CR   P  +T++ ++
Sbjct: 342 VVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMI 381



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 212/414 (51%), Gaps = 23/414 (5%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y  +I G   + DL  A ++  EM   G++ N    +I++ G  + G   +A E ++  
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAG 255
           +      P+VV+Y  +INGLCK GR D   +++ +M        ++FTY + + GLCK  
Sbjct: 87  LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYN 314
            ++ A  V  E  +     D VTYN ++    + G++ E    +  M  +G +  +VS+N
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I GL    ++ +A+ ++  + +++ + +  T+ V+I+GLCK+  L++A Q+L      
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL------ 260

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                       +RM   GC+ +      L+ GF  A +L++A+ L + M  +GC P VV
Sbjct: 261 ------------DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 308

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  +I+ LCKV R  +A+   +E++     P+++TYS LI G C++ ++D   K+    
Sbjct: 309 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---M 365

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +    P+V  YN +I GL    + E+A  ++  M +   VP+  TY  L   L
Sbjct: 366 REMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 191/388 (49%), Gaps = 22/388 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VET 168
            C     + A   L  +  +G++ +  +   ++ GL + G +  AL  FD   E    + 
Sbjct: 35  FCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQP 94

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           +VV Y  LI+G  K G    A +++ ++V      PN  TYN +++GLCK  R D    +
Sbjct: 95  DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAV 154

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
               +K +   D  TY + +  L + G V+ A   + +M E G     V++NA+I G CR
Sbjct: 155 ITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCR 214

Query: 289 AGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           A ++ +  E++ E++ R    N+V+Y+++I GL ++ ++DEA  + + +  + C  D   
Sbjct: 215 ARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVA 274

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
           +  L+ G    G L+ A+ +L  +   G                  GR+ DA  +   + 
Sbjct: 275 YTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 334

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
            + C  N  T ++L+ G+ +AS+++    + +EM+   C P VV+YNT+I GL  V+R  
Sbjct: 335 ANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNE 391

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGL 478
           EAY   +EM E G+ PD  TY  L   L
Sbjct: 392 EAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 171/356 (48%), Gaps = 18/356 (5%)

Query: 110 LCR-KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VE 167
           LCR  R  +  + F  SL     +PDV SY T+INGL K G +  A  +F +M   G   
Sbjct: 70  LCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR 129

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            N   YN L+DG  K+ D + A         +    P+VVTYN ++  L + GR DE L 
Sbjct: 130 PNAFTYNALVDGLCKQ-DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALA 188

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
            + +M +        ++ + I GLC+A  +  A  V+ EM++     + VTY+ +IDG C
Sbjct: 189 TFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLC 248

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           ++ ++ E  +L + M  +GC  ++V+Y  L+ G    G++D A+ +   +  + C  D  
Sbjct: 249 KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 308

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEE--------------GGEGRLADAASLVNRMDKH 392
           T+ V+I+ LCK G ++ A +I  E+                GG  R +        M + 
Sbjct: 309 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
            C+ N  T N+++ G     + E A  +F+EMS  G  P   +Y  L   L  +++
Sbjct: 369 ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 19/331 (5%)

Query: 56  HVSRILELIEIQKCYCPEDVA-LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI----- 109
           H    LEL   Q    P+ V+  ++I    K    D A D+F++M    GC         
Sbjct: 82  HFDASLELAHAQ----PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 110 ----LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
               LC++ + + A+  +    ++   PDV +Y T++  L + G +  ALA F +M E G
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
               +V +N +I G  +      A E++  ++ +   +PN+VTY+V+I+GLCK  + DE 
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMI-DRDFHPNLVTYSVVIDGLCKSDQLDEA 256

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
            ++ DRM       D   Y   + G   AG ++ A  + R MV  G   D VTY  +ID 
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316

Query: 286 FCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C+ G++ +  E++ E++  K   NVV+Y+ LI G     +VDE     +++RE  C  +
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG---GKVMREMACRPN 373

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
             T+  +I GL       +A  +  E+ E G
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 2/156 (1%)

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY-S 527
           +TY++LI G C +  +D A  L  +   +G   +    +I++ GLC  G+V  AL+ + +
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSC 586
           +++  +  P++V+Y TL++GL K G  D A +++  ++     RP+  +YN  + GLC  
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R+  A   + +A  R   P  +T++ L+ A+   G
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLG 181


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 246/507 (48%), Gaps = 37/507 (7%)

Query: 80  IQAYGKNSMPDKALDVFQRMN----EIFGCE----AGILCRKRQFEKAKRFLNSLWEKGL 131
           I +Y K  + D A+ VF  M      +FG +     G+L R  +F+ A  + + +   G 
Sbjct: 16  IASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGF 75

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
               ++Y   I+GL ++ +      +  +M +     ++  +NI ++  F++     A E
Sbjct: 76  SLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALE 135

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           ++ R+V E    P+VVT+ ++I+GLCK  +FD  ++ W  M       D+    +   GL
Sbjct: 136 VFGRMV-ERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGL 194

Query: 252 CKAGNVEGAERVYREMVESGIF-VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
           C  G V+ A  +   ++  G+  V  + YNA+I GFCRAG+I +   +   M R GC  +
Sbjct: 195 CDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPD 254

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNA---DSTTHGVLINGLCKNGYLNKAIQ 366
           +V+YN+L+         +EA+   +LL++  C+A   D  ++  L+   CK  + +KA  
Sbjct: 255 LVTYNVLLNYCCNEFMFEEAV---KLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYL 311

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                             +V +M   G C + +Y  N+++  F   S    A  LF+EM 
Sbjct: 312 F-----------------MVTKMVPKGFCDVVSY--NTIIKAFCSISNNRRAYKLFEEMG 352

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           RKG +P VV++  LI    +      A   +  M   G  PD I Y+ +I+  C+S K++
Sbjct: 353 RKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVE 412

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           MA  + C  ++KG TPDV  YN LI+G C + +V + + LY  M +R   P+ VTY  ++
Sbjct: 413 MAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLII 472

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPD 572
             L +      A  +W+ ++E  L  D
Sbjct: 473 GALVRENKLSDACRVWDQMMERGLTLD 499



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 214/468 (45%), Gaps = 24/468 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVM-ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
           Y   I  + K G    A ++++ + + E  V+   + YN  I  L +  RFD     + +
Sbjct: 12  YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFG--IDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M        SFTY  FI GLC+       + + ++M +     D   +N  ++   R  +
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENR 129

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
            +   E++  M  +G   +VV++ I+I GL +  K D A+  W  + +K    D+     
Sbjct: 130 EESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVA 189

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKH 392
           L  GLC  G ++ A +++  V  GG                   GR+  A ++V+ M + 
Sbjct: 190 LAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRT 249

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           GCK +  T N L+N        E A+ L K+M      P V SYN L+   CK     +A
Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309

Query: 453 YSF-VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           Y F V +M+ KG+  D+++Y+ +I   C       A KL  +  +KG  PDV  + ILI 
Sbjct: 310 YLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIK 368

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
                G  + A +L   M     +P+ + Y T++D   K+G  + A  I+  ++E+ + P
Sbjct: 369 AFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITP 428

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           D++SYN  + G C   R+ +        L RG  P  +T+ +++ A++
Sbjct: 429 DVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALV 476



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 55/388 (14%)

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISI 332
           V  + Y   I  + +AG I    ++++ M    C +  + YN  I  L+ + + D A   
Sbjct: 7   VHRLIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHY 66

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +  +     +  S T+   I+GLC+     K    ++              +L+  M+K 
Sbjct: 67  YSKMAPLGFSLSSFTYSRFISGLCQT----KEFTFID--------------NLLKDMEKL 108

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            C  + +  N  +N   + ++ E+A+ +F  M  +G  P VV++  +I+GLCK+++F  A
Sbjct: 109 HCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAA 168

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTM-YNILIH 511
             F   ML+KG +PD      L  GLC   ++D+A +L    +  G +   T+ YN LI 
Sbjct: 169 VQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALIS 228

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD------------GLFKTGDC---DK 556
           G C AG+++ AL + S M +  C P+LVTYN L++             L K  +C   + 
Sbjct: 229 GFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEP 288

Query: 557 ALEIWNHILEERLRP--------------------DIISYNITLKGLCSCSRMSDAFEFL 596
            +  +N +L+   +                     D++SYN  +K  CS S    A++  
Sbjct: 289 DVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLF 348

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
            +   +GI P  +T+ IL++A +  G S
Sbjct: 349 EEMGRKGIAPDVVTFTILIKAFLREGNS 376



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 187/414 (45%), Gaps = 58/414 (14%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F     +L R+ + E A      + E+G +PDV ++  +I+GL K      A+  +  M 
Sbjct: 117 FNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNML 176

Query: 163 ERGV------------------------------------ETNVVCYNILIDGFFKKGDY 186
           ++G+                                    E + + YN LI GF + G  
Sbjct: 177 DKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRI 236

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            +A  +    +  T   P++VTYNV++N  C    F+E +++  +M+ +  E D ++Y  
Sbjct: 237 DKALAMVS-FMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQ 295

Query: 247 FIHGLCKAGNVEGAER-VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
            +   CKA + + A   +  +MV  G F D V+YN +I  FC     +  ++L+E MGRK
Sbjct: 296 LLKAHCKANHPDKAYLFMVTKMVPKG-FCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRK 354

Query: 306 GCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   +VV++ ILI+  L  G  D A  + +L+       D   +  +I+  CK+G +  A
Sbjct: 355 GIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMA 414

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM 424
             I  ++ E  +G   D  S                 N+L+NGF ++ ++   + L+++M
Sbjct: 415 HSIFCDMVE--KGITPDVVSY----------------NALINGFCKSLRVGEVMHLYEQM 456

Query: 425 SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            ++G  P  V+Y  +I  L +  +  +A     +M+E+G   D     +LIN +
Sbjct: 457 LQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAI 510



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 9/175 (5%)

Query: 66  IQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFE 117
           + K +C      ++I+A+   S   +A  +F+ M           F        R+   +
Sbjct: 318 VPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
            AK+ L+ +   GL PD   Y T+I+   KSG +  A ++F +M E+G+  +VV YN LI
Sbjct: 378 MAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALI 437

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +GF K         ++E+++   S +P+ VTY ++I  L +  +  +   +WD+M
Sbjct: 438 NGFCKSLRVGEVMHLYEQMLQRGS-FPDEVTYKLIIGALVRENKLSDACRVWDQM 491



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 13/142 (9%)

Query: 67  QKCYCPEDVALSV-IQAY---GKNSMPDKALDVFQRM----NEIFGCEAGIL---CRKRQ 115
           +K   P+ V  ++ I+A+   G + M  K LD+   M    + IF     I+   C+  +
Sbjct: 353 RKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIF--YTTIIDHHCKSGK 410

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
            E A      + EKG+ PDV SY  +ING  KS  +   + ++++M +RG   + V Y +
Sbjct: 411 VEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKL 470

Query: 176 LIDGFFKKGDYMRAKEIWERLV 197
           +I    ++     A  +W++++
Sbjct: 471 IIGALVRENKLSDACRVWDQMM 492


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 268/565 (47%), Gaps = 50/565 (8%)

Query: 17  NPHTALALFDS-ATREPGYAHSPHLFHHIL--RRLIDPKLVVHVSRILE-LIEIQKCYCP 72
            PH+ LA F    T+    +  P L  H++   RL + +    +  IL  L+      CP
Sbjct: 69  QPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDIECP 128

Query: 73  EDVALSVIQAY----------------GKNSMPDKALDVFQRMNEI------FGCEAGIL 110
               + ++  +                  N + D+ + V+  + E         C   +L
Sbjct: 129 VSSIVDLVDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLL 188

Query: 111 CRKR--QFEKAKRFLNSLWEKG-LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-V 166
             KR  + +   RF + + E    +  V S   VI+ L + G++  A  + DEM  +G V
Sbjct: 189 ALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIV 248

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           + NV  YN L++ +  + D     EI + +  E  V+ +V TY+++I      G  +E  
Sbjct: 249 KPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVF-SVATYSILIQWYSSSGDIEEAE 307

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++++ M++   E D + Y S I    + GN++ A  ++ EM +  I  +A TY A+I G 
Sbjct: 308 KIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGV 367

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+AG+++    L   M  KG  LN+V +N  + G    GK+DEA+ +  ++ +K  NAD 
Sbjct: 368 CKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADV 427

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+ +L NGLCK                    R  +A  ++N M + G K N  T    +
Sbjct: 428 FTYNILANGLCK------------------LHRYDEAKCILNSMVEKGVKPNVVTFTMFI 469

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
             + +   L  A  LF++M +KG  P +++YNTLI+  CK E+  +A+    EM+ KG  
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD+ TYS LI+G C   ++D ALKL  +   KG T +V  Y  +I GL   G+ ++A +L
Sbjct: 530 PDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFK 550
           Y  M K   +P+   + +L+    K
Sbjct: 590 YDEMMKIGLIPDDRVFTSLVGSFHK 614



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 251/506 (49%), Gaps = 40/506 (7%)

Query: 140 TVINGLVKSGDLLGALA----VFDEMFERGVET------NVVCYNILIDGFFKKGDYMRA 189
           +++NGLV   D+   ++    + DE     VE        V   N L D   +  DY+  
Sbjct: 114 SILNGLVTDSDIECPVSSIVDLVDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDYVEE 173

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM-KKNEREKDSFTYCSFI 248
           K +   ++ E S +       V++  L +CG  D C+  + RM + N+ E    +    I
Sbjct: 174 KGL---VIEERSCF-------VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVI 223

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
             LC+ G VE A+ +  EMV  GI    V TYN +++ +      K   E+ ++M ++  
Sbjct: 224 DVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQV 283

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + +V +Y+ILI+    +G ++EA  I+E +REKN   D   +  +I+   + G + +A  
Sbjct: 284 VFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFA 343

Query: 367 ILNEVEE--------------GG---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           + +E+ +              GG    G++  A  L+  M   G  LN    N+ M+G+ 
Sbjct: 344 LFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  K++ A+ L   M +KG +  V +YN L NGLCK+ R+ EA   +  M+EKG KP+++
Sbjct: 404 RRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVV 463

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           T+++ I   C+   +  A +L     +KG  P++  YN LI   C   KV+ A ++ S M
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
             +  +P+L TY++L+ G    G  D+AL+++N +  + +  ++ +Y   + GL    R 
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRA 583

Query: 590 SDAFEFLNDALCRGILPTTITWHILV 615
            +AF+  ++ +  G++P    +  LV
Sbjct: 584 DEAFKLYDEMMKIGLIPDDRVFTSLV 609


>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 174/689 (25%), Positives = 292/689 (42%), Gaps = 89/689 (12%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILR--------RLIDP---KLVVHVSRILELIE 65
           NP  AL+ F     + G++H+   +  I+R        R +D     +++  S+   L E
Sbjct: 76  NPSLALSHFSELKNQHGFSHNIQTYVAIIRILCYWNLNRRLDSLFRDIIISHSKQNPLFE 135

Query: 66  IQKCYCPEDVALSVIQAYGKN-----------------SMPDKALDV--------FQRMN 100
           I   +   +  L  +    KN                 +M D A+D         F  + 
Sbjct: 136 IHDLF---EKLLEGVNVKDKNHYLLRAFVGFVKACVGLNMFDDAIDFMFMFQIRRFGILP 192

Query: 101 EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL-VKSGDLLGALAV 157
            IF C   I  L +  Q   A    + +   GL P+ ++Y  +I  L  K GDL  A  V
Sbjct: 193 NIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGV 252

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLC 217
           FDEM E GV  N  CY   I+G           ++  R + E +   +V  Y  +I G C
Sbjct: 253 FDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLL-RALRENNAPIDVYAYTAVIRGFC 311

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV 277
              + D+ ++++  M+      D   Y S I G CK  ++  A  +Y +M+  GI  + V
Sbjct: 312 NEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCV 371

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELL 336
             + ++  F   G+     + ++ + + G  L+ V+YNI+   L + GK+DE   + E L
Sbjct: 372 IVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDL 431

Query: 337 REKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRL 379
           +  + + D   +   I G C  G  +KA  I  E+EE G                    +
Sbjct: 432 KSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHV 491

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
           ++A  L+N MD  G K N+ T   ++ GF    K+E A   F  M  +    +V  Y  +
Sbjct: 492 SEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDE----SVEIYTAM 547

Query: 440 INGLCKVERFGEAYSFVKEMLEKG---------WKPDMITYSLLINGLCQSKKIDMALKL 490
           ++G C+ +   ++Y    E+  +G          +   + YS ++  LCQ   +  A  L
Sbjct: 548 VSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSL 607

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
              FL +GFTPDV  Y I+I   C+   +++A  L+ +MK R   P+++TY  L+DG  K
Sbjct: 608 FDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSK 667

Query: 551 TGDCDKALE---------------IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
                +                  IW  + +  + PD++ Y + + G        DA   
Sbjct: 668 QARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRL 727

Query: 596 LNDALCRGILPTTITWHILVRAVMNNGAS 624
            N+ + RG+ P  +T+  L   ++N+G S
Sbjct: 728 FNEVMKRGLEPDNVTYTALFSGLLNSGNS 756



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 255/519 (49%), Gaps = 44/519 (8%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR-FLNSLWEKGLK 132
           D+   +++A  +N+ P   +DV+     I G      C + + +KA + F +  W++ L 
Sbjct: 282 DLGYDLLRALRENNAP---IDVYAYTAVIRG-----FCNEMKLDKAMQVFYDMEWQR-LV 332

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           PD + Y ++I G  K+ DL+ AL ++++M  +G++TN V  + ++  F + G+  R  + 
Sbjct: 333 PDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDT 392

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           ++  V ++ V+ + V YN++ + L K G+ DE   M + +K    + D   Y +FI G C
Sbjct: 393 FKE-VKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYC 451

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
             G  + A  +++EM E G   D V YN +  G C    + E  +L   M  +G   N  
Sbjct: 452 LQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNST 511

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++ I+I G    GK++EA   +  +++++       +  +++G C+   + K+ ++ +E+
Sbjct: 512 THKIIIEGFCSEGKIEEAEGYFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHEL 567

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
              G+   A  +S + ++ K          + ++    Q   ++ A  LF     +G +P
Sbjct: 568 SNRGD--TAQESSCLKQLSK-------VLYSKVLAELCQKGNMQRARSLFDFFLGRGFTP 618

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            VV+Y  +I   C +    EA+   ++M  +G KPD+ITY++L++G  +SK+        
Sbjct: 619 DVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDG--KSKQARSKEHFS 676

Query: 492 CQ-----------------FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
            Q                    +  +PDV +Y +LI G       EDA++L++ + KR  
Sbjct: 677 SQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGL 736

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
            P+ VTY  L  GL  +G+ + A+ ++N +  + + P +
Sbjct: 737 EPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTPPL 775


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 227/460 (49%), Gaps = 28/460 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  + +KA   +  +  + L PDV++Y  VI+ L K+  +  A+    E FE   E +
Sbjct: 45  LCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI----EFFETMPEPD 100

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVME-TSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           VV YN L+ G  K G   +A  ++    ME   + P+ VTY  +I+  CK  +F+    +
Sbjct: 101 VVTYNTLLGGLCKNGRVAQACSLFGS--MEGAGITPSDVTYTTLIDVFCKMCQFETAYGL 158

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
              M   +     ++YCS I+GLCK   V+ A +++ EM  +G   D VTYN +I G C 
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             ++ E  +L  VM   G   + +++  LI GL    ++ EA  +++ + ++ C  D  T
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 278

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           H VL++ LC    L  A+ ++       E  +     +   + +               G
Sbjct: 279 HTVLVSKLCILRKLRPALSVVRNYPACPEAVIL-YTPIFRELGRR-------------RG 324

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           F +A++L       ++M+R+G  P VV+Y     GL   +    AY   + MLE+G +PD
Sbjct: 325 FDRAARL------LQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPD 378

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           M+ Y++L++G C++ ++DMA K+     Q G  P++  YN L+   C  GKVE   +L  
Sbjct: 379 MVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLH 438

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
            M  R   P++ T++TL+ GLF  G  D A    N  + +
Sbjct: 439 TMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQ 478



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 231/483 (47%), Gaps = 57/483 (11%)

Query: 155 LAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMIN 214
           + VF  +F +  + N + Y  L+    + G   +A      +  E  V P+V TYNV+I+
Sbjct: 20  VVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLV-PDVFTYNVVID 78

Query: 215 GLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV 274
            LCK  R    +E ++ M     E D  TY + + GLCK G V  A  ++  M  +GI  
Sbjct: 79  TLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITP 134

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
             VTY  +ID FC+  + +  + L ++M  + C   V SY  +I GL +N KVD+A  ++
Sbjct: 135 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 194

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
           E ++   C  D  T+  LI+GLC                   + RL +A  L+  M ++G
Sbjct: 195 EEMKLAGCKPDRVTYNTLIHGLCV------------------KQRLHEAKDLLTVMVENG 236

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            + +  T  +L+ G     +++ A  LF+ M+++GC+P +V++  L++ LC + +   A 
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 454 SFVK---------------------------------EMLEKGWKPDMITYSLLINGLCQ 480
           S V+                                 +M  +G  P+++TY+    GL  
Sbjct: 297 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
            K+   A +   + L++G  PD+  YN+L+ G C A +++ A ++   M +    PN+VT
Sbjct: 357 WKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVT 416

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           YNTL+    + G  +   E+ + ++    +PD+ +++  + GL    +   A+ FLN A+
Sbjct: 417 YNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAM 476

Query: 601 CRG 603
            +G
Sbjct: 477 SQG 479



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 205/442 (46%), Gaps = 54/442 (12%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           VT N +++ L +  R ++ + ++ R+   + + ++ +YC  +  LC+ G ++ A     E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKV 326
           M    +  D  TYN +ID  C+A +I    E +E M      +VV+YN L+ GL +NG+V
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP---DVVTYNTLLGGLCKNGRV 117

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
            +A S++  +          T+  LI+  CK                    +   A  L+
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKM------------------CQFETAYGLL 159

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             M    C    Y+  S++NG  +  K++ A  LF+EM   GC P  V+YNTLI+GLC  
Sbjct: 160 QLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVK 219

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
           +R  EA   +  M+E G++PD IT++ LI GLC + +I  A  L     ++G  PD+  +
Sbjct: 220 QRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTH 279

Query: 507 NILIHGLCSAGKVEDALQLYSN---------------------------------MKKRN 533
            +L+  LC   K+  AL +  N                                 M +R 
Sbjct: 280 TVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+VTY     GL    +  +A   +  +LE+ + PD+++YN+ + G C   R+  A 
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399

Query: 594 EFLNDALCRGILPTTITWHILV 615
           + +      G+ P  +T++ LV
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLV 421



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
            R+    CK NA +   L+    +  K++ A     EM+R+   P V +YN +I+ LCK 
Sbjct: 24  RRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKA 83

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            R   A  F + M E    PD++TY+ L+ GLC++ ++  A  L       G TP    Y
Sbjct: 84  RRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTY 139

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             LI   C   + E A  L   M  R C P + +Y ++++GL K    D+A +++  +  
Sbjct: 140 TTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKL 199

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
              +PD ++YN  + GLC   R+ +A + L   +  G  P  IT+  L+  +
Sbjct: 200 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGL 251


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 258/528 (48%), Gaps = 29/528 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  +   A+R L +    G   +V +Y  +I+G  +SG L  AL +   M    V  + 
Sbjct: 135 CRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDT 190

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN ++ G      +  A+E+   ++      PN VT+   I   C+ G  D  +++ D
Sbjct: 191 YTYNTVLKGLCIAKKWEEAEELMAEMI-RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLD 249

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M +     D   Y + I+G  + G+V+ A  +   M+      + V YNA + G C A 
Sbjct: 250 QMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAE 306

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           + ++  EL   M RKGC  N  ++++LI  L +N  VD A+ + E + +  C  D+  + 
Sbjct: 307 RWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYN 366

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEG--------------RLADAASLVNRMDKHGCK 395
           ++IN L + G ++ A+++LN +    +               R  DA+ L+ +M +  C 
Sbjct: 367 IIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCP 426

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
           L   T N L++   Q   +  A  +F++M R  C+P +V+Y++L+NG  +      A   
Sbjct: 427 LIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQL 486

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
            + M     KPD+ +Y+ ++ GLC++ + + A +L  + + K   P+   +NILI+ LC 
Sbjct: 487 FRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQ 543

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G V+ A+++   M      P++ TYN L++G  + G  D AL++ + +     +PD IS
Sbjct: 544 KGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAIS 600

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           YN TLKGLC   R  DA E + + L     P  +T+      +M N A
Sbjct: 601 YNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRA 648



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 220/444 (49%), Gaps = 33/444 (7%)

Query: 100 NEI-FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           NE+ F  +    C+    ++A + L+ +   G  PDV  Y T+ING  + G +  AL + 
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           + M     + N VCYN  + G      +    E+   +V +    PN  T++++I+ LC+
Sbjct: 284 NTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK-GCSPNEATFSMLISSLCQ 339

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
               D  +E+ ++M+K   E D+  Y   I+ L + G V+ A R+   MV      DA+ 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKP---DALG 396

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLR 337
           +NA++ GFCRA +  +  EL   M R  C L  +++NILI  L +NG V+ A  ++E + 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
              C  D  T+  L+NG  + G +  AIQ+   +                      CK +
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---------------------CKPD 495

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            ++ N+++ G  +A++ E+A  L  EM  K C P  V++N LIN LC+      A   ++
Sbjct: 496 IFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLE 555

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M   G  PD+ TY+ LING  +  ++D ALKL      K   PD   YN  + GLC A 
Sbjct: 556 QMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAE 612

Query: 518 KVEDALQLYSNMKKRNCVPNLVTY 541
           + +DA +L + M +  C PN VT+
Sbjct: 613 RWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 228/453 (50%), Gaps = 33/453 (7%)

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           V +N L+ G+ + G    A+ +        +   NVVTY  +I+G C+ GR D+ L +  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLG--AARATGAANVVTYTALIDGYCRSGRLDDALRLIA 182

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M       D++TY + + GLC A   E AE +  EM+ +    + VT+   I  FC+ G
Sbjct: 183 SMPV---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +    +L + M R GC  +VV Y+ LI G  E G VD+A+   +LL    C  ++  + 
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL---DLLNTMLCKPNTVCYN 296

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
             + GLC          I    E+ GE        L+  M + GC  N  T + L++   
Sbjct: 297 AALKGLC----------IAERWEDIGE--------LMAEMVRKGCSPNEATFSMLISSLC 338

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q + +++A+ + ++M + GC P  V+YN +IN L +  R  +A   +  M+    KPD +
Sbjct: 339 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDAL 395

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            ++ ++ G C++++   A +L  Q  +         +NILI  LC  G V  A Q++  M
Sbjct: 396 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 455

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
            +  C P++VTY++L++G  + G  + A++++  +     +PDI SYN  LKGLC  +R 
Sbjct: 456 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARW 512

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            DA E + + + +   P  +T++IL+ ++   G
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKG 545


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 234/466 (50%), Gaps = 18/466 (3%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A+A+F ++  R  +     YN +I     +G Y +  E++  +  E   +P+ VTY+ +I
Sbjct: 174 AVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALI 233

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
           +  CK GR D  + + + MK N  +  +  Y   I    K  NV GA  ++ EM      
Sbjct: 234 SAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCR 293

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
            D  TY  +I G  +AG+  E +  +  M R+GC  + V  N +I  L + G++D+A+ +
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKL 353

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
           +E +    C     T+  +I  L ++                 + R+++ +S   RM   
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFES-----------------KSRISEISSWFERMKGS 396

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
           G   + +T + L++GF + ++ E A+ L +EM  KG  P   +Y +LI+ L K +R+  A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
           +   +E+ E         Y+++I  L ++ ++D A+ L  +  + G TP+V  YN L+ G
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           L  AG +++AL     M++  C+P++ +YN +++GL KTG   +A+E+ +++ +  ++PD
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +SYN  L  +       +A + + +    G     IT+  ++ A+
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 223/508 (43%), Gaps = 33/508 (6%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAY 83
           +     R P    +P     I+R L + K++     I   I+++KC        S+I   
Sbjct: 141 MIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIML 200

Query: 84  GKNSMPDKALDVFQRMNE---------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPD 134
                 +K  +++  M+           +       C+  + + A R LN + + G++P 
Sbjct: 201 MHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPT 260

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
              Y  +I    K  ++ GAL +F+EM  +    +V  Y  LI G  K G +  A   + 
Sbjct: 261 AKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFH 320

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            +  E    P+ V  N MIN L K GR D+ +++++ M   +      TY + I  L ++
Sbjct: 321 EMRRE-GCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFES 379

Query: 255 -GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN-VVS 312
              +      +  M  SGI     TY+ +IDGFC+  + ++   L E M  KG      +
Sbjct: 380 KSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           Y  LI  L +  + D A  +++ L+E   ++ +  + V+I  L K G L+          
Sbjct: 440 YCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLD---------- 489

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
                   DA +L + M+K GC  N Y  N+LM+G  +A  L+ A+   + M   GC P 
Sbjct: 490 --------DAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPD 541

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCC 492
           + SYN ++NGL K      A   +  M +   KPD ++Y+ ++  +  +   + A KL  
Sbjct: 542 INSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMK 601

Query: 493 QFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           +    GF  D+  Y+ ++  +   GKV+
Sbjct: 602 EMNVLGFEYDLITYSSILEAI---GKVD 626



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 151/345 (43%), Gaps = 21/345 (6%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNI--LIRGLLENGKVDEAISI 332
           D  TY A+I       +  E +++ + M R     V    +  +IR L     + +A++I
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE---------------- 376
           +  ++ + C   +  +  +I  L   G   K  ++ NE+   G                 
Sbjct: 178 FYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFC 237

Query: 377 --GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
             GR   A  L+N M  +G +  A     L+  F + + +  A+ LF+EM  + C P V 
Sbjct: 238 KLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVF 297

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +Y  LI GL K  RF EAY+F  EM  +G +PD +  + +IN L ++ ++D A+KL  + 
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM 357

Query: 495 LQKGFTPDVTMYNILIHGLC-SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
                 P V  YN +I  L  S  ++ +    +  MK     P+  TY+ L+DG  KT  
Sbjct: 358 GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNR 417

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
            +KA+ +   + E+   P   +Y   +  L    R   A E   +
Sbjct: 418 TEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQE 462



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 1/229 (0%)

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           C +     + ++     A  +  A+ +F ++  + C PT  +YN++I  L    ++ + +
Sbjct: 151 CVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVH 210

Query: 454 SFVKEMLEKGW-KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
               EM  +G   PD +TYS LI+  C+  + D A++L  +    G  P   +Y +LI  
Sbjct: 211 ELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIAL 270

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
                 V  AL L+  M+ + C P++ TY  L+ GL K G  D+A   ++ +  E  RPD
Sbjct: 271 FFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD 330

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
            +  N  +  L    R+ DA +   +      +P+ +T++ +++A+  +
Sbjct: 331 TVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFES 379


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 255/541 (47%), Gaps = 54/541 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  +  +    L  + E G+ P+  +Y T+++ L K+ D   ALA++ +M  RG+  +
Sbjct: 269 LCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVD 328

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------------------------------- 197
           +V Y +L+ G FK GD   A++ ++ L+                                
Sbjct: 329 LVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIIT 388

Query: 198 --METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             +E SV+PNVVTY+ MING  K G  +E + +  +M+      + FTY + I GL KAG
Sbjct: 389 QMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAG 448

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
             E A  + +EM   G+  +    +A+++   R G+IKE   L + M  KG  L+ ++Y 
Sbjct: 449 KQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYT 508

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI    + G  + A+S  E ++EK    D  ++ VLI+GL K G +             
Sbjct: 509 SLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG------------ 556

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                AD A     M + G + +  T N +MN   +    E  + L+ +M   G  P+++
Sbjct: 557 -----ADWA--YKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLM 609

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
             N ++  LC+  +  EA   + +M+     P++ TY + ++   + K+ D   K     
Sbjct: 610 ICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETL 669

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
           L  G      +YN LI  LC  G    A  +  +M+ R  VP+ VT+N LM G F     
Sbjct: 670 LSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHV 729

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            KAL  ++ ++E  + P++ +YN  ++GL     + +  ++L++   RG+ P   T++ L
Sbjct: 730 GKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNAL 789

Query: 615 V 615
           +
Sbjct: 790 I 790



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 255/524 (48%), Gaps = 30/524 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  Q   A   L +   + +  D  +Y TVI+GL + G    A     EM + G+  +
Sbjct: 139 LCKVGQLSFAISLLRN---RVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPD 195

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V +N LIDGF K G++ RAK     LV E S   N++T+ ++I+        +E    +
Sbjct: 196 TVSFNTLIDGFCKVGNFARAKA----LVDEISEL-NLITHTILISSYYNLHAIEEA---Y 247

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M  +  + D  T+ S I+ LCK G V     + REM E G++ + VTY  ++D   +A
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKA 307

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
              +    L+  M  +G  +++V Y +L+ GL + G + EA   +++L E N   +  T+
Sbjct: 308 KDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTY 367

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             L++GLCK G L+ A  I+ ++ E                   +G L +A SL+ +M+ 
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMED 427

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
                N +T  ++++G  +A K E A  + KEM   G        + L+N L ++ R  E
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               VK+M+ KG   D I Y+ LI+   +    + AL    +  +K    DV  YN+LI 
Sbjct: 488 VKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLIS 547

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           GL   GKV  A   Y  M+++   P++ T+N +M+   K GD +  L++W+ +    ++P
Sbjct: 548 GLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKP 606

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ++  NI +  LC   +M +A + L+  +   I P   T+ I +
Sbjct: 607 SLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFL 650



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 240/489 (49%), Gaps = 21/489 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PDV ++ ++IN L K G ++    +  EM E GV  N V Y  L+D  FK  DY  A
Sbjct: 254 GFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHA 313

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             ++ ++V+   +  ++V Y V++ GL K G   E  + +  + ++    +  TY + + 
Sbjct: 314 LALYSQMVVR-GIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVD 372

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           GLCKAG++  AE +  +M+E  +F + VTY++MI+G+ + G ++E   L   M  +  + 
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVP 432

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +Y  +I GL + GK + A  + + +R              + G+ +N Y+  A  ++
Sbjct: 433 NGFTYGTVIDGLFKAGKQEVASEMSKEMR--------------LIGVEENNYILDA--LV 476

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
           N ++    GR+ +   LV  M   G  L+     SL++ F +    E A+   +EM  K 
Sbjct: 477 NHLKR--IGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKE 534

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
               VVSYN LI+GL K  + G  +++ K M EKG +PD+ T+++++N   +    +  L
Sbjct: 535 MPWDVVSYNVLISGLLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDFEGIL 593

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           KL  +    G  P + + NI++  LC  GK+++A+ +   M      PNL TY   +D  
Sbjct: 594 KLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMS 653

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            K    D   +    +L   ++     YN  +  LC       A   + D   RG +P T
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDT 713

Query: 609 ITWHILVRA 617
           +T++ L+  
Sbjct: 714 VTFNALMHG 722



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 220/474 (46%), Gaps = 27/474 (5%)

Query: 149 GDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVT 208
           G L GA      M   GV  ++  +N LI  F   G       +    ++   V P+V  
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFA 131

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
            NV+I+ LCK G+    + +   ++      D+ TY + I GLC+ G  + A +   EMV
Sbjct: 132 LNVLIHSLCKVGQLSFAISL---LRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDE 328
           + GI  D V++N +IDGFC+ G       L + +     LN++++ ILI        ++E
Sbjct: 189 KIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISE---LNLITHTILISSYYNLHAIEE 245

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A   +  +     + D  T   +IN LCK+G          +V EGG         L+  
Sbjct: 246 A---YRDMVMSGFDPDVVTFSSIINRLCKDG----------KVMEGG--------LLLRE 284

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M++ G   N  T  +L++   +A    +A+ L+ +M  +G    +V Y  L+ GL K   
Sbjct: 285 MEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGD 344

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA    K +LE    P+++TY+ L++GLC++  +  A  +  Q L+K   P+V  Y+ 
Sbjct: 345 LREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSS 404

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           +I+G    G +E+A+ L   M+ +N VPN  TY T++DGLFK G  + A E+   +    
Sbjct: 405 MINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIG 464

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +  +    +  +  L    R+ +    + D + +G+    I +  L+      G
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGG 518



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 254/601 (42%), Gaps = 73/601 (12%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T   L DS  +   Y H+  L+  ++ R I   LVV+   +  L +       E   
Sbjct: 293 NHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTF 352

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +++    N +P+            +      LC+      A+  +  + EK + P+V 
Sbjct: 353 KMLLE---DNEVPNVV---------TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVV 400

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y ++ING VK G L  A+++  +M ++ V  N   Y  +IDG FK G    A E+ + +
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEM 460

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDE-------------------------------- 224
            +   V  N    + ++N L + GR  E                                
Sbjct: 461 RL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGD 519

Query: 225 ---CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
               L   + M++ E   D  +Y   I GL K G V GA+  Y+ M E GI  D  T+N 
Sbjct: 520 EEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNI 578

Query: 282 MIDGFCRAGKIKECFELWEVM---GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           M++   + G  +   +LW+ M   G K  L +   NI++  L E GK+ EAI I + +  
Sbjct: 579 MMNSQRKQGDFEGILKLWDKMKSCGIKPSLMIC--NIVVGMLCEKGKMKEAIDILDQMMF 636

Query: 339 KNCNADSTTHGVLINGLCKN-----------GYLNKAIQILNEVEEG------GEGRLAD 381
              + + TT+ + ++   K+             L+  I++  +V           G    
Sbjct: 637 MEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRK 696

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           AA ++  M+  G   +  T N+LM+G+   S +  A+  +  M   G SP V +YNT+I 
Sbjct: 697 AAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIR 756

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GL       E   ++ EM  +G +PD  TY+ LI+G  +      ++ + C+ +  G  P
Sbjct: 757 GLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVP 816

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
             + YN+LI      GK+  A +L   M KR   PN  TY T++ GL K   C      W
Sbjct: 817 KTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKL--CTHPEVEW 874

Query: 562 N 562
           N
Sbjct: 875 N 875



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 196/425 (46%), Gaps = 30/425 (7%)

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNV- 257
           +T VY  V  ++ +      CGR          M       D   + S IH     G V 
Sbjct: 53  KTRVY--VSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVH 110

Query: 258 EGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILI 317
           +    VY +M+  G+  D    N +I   C+ G++   F +  +  R   ++ V+YN +I
Sbjct: 111 DQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQL--SFAISLLRNRVISVDTVTYNTVI 168

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL E+G  DEA      + +     D+ +   LI+G CK G   +A  +++E+ E    
Sbjct: 169 SGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISE---- 224

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                             LN  T   L++ +     +E A   +++M   G  P VV+++
Sbjct: 225 ------------------LNLITHTILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFS 263

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
           ++IN LCK  +  E    ++EM E G  P+ +TY+ L++ L ++K    AL L  Q + +
Sbjct: 264 SIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVR 323

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   D+ +Y +L+ GL  AG + +A + +  + + N VPN+VTY  L+DGL K GD   A
Sbjct: 324 GIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSA 383

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
             I   +LE+ + P++++Y+  + G      + +A   +     + ++P   T+  ++  
Sbjct: 384 EFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDG 443

Query: 618 VMNNG 622
           +   G
Sbjct: 444 LFKAG 448


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 213/416 (51%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  + R
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLE 322
           EM E  GI  +  TY  +I G+C+ G++ E  ++++ M  KG +    V YN LI G  +
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   + + E+       T+ +L++ L  +G   +A +++ E+  GG+G   D 
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM--GGKGLAPDV 656

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                           +T N L+NG  +   ++ A+ +F+ MSR+G   TVV+Y  LI  
Sbjct: 657 ----------------FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 700

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  E      E + +G +PD++ Y+ LIN    S  ID A ++  +  +K   PD
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ GLC  G+V++A +L   M +R   P+LVTYNTL+ G    GD   AL I N
Sbjct: 761 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 820

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++ +   P +++YN  ++GLC   +  DA   + + +  GI P   T+  L+  +
Sbjct: 821 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 20/391 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           E+  +    N V YN +I GF  +G    A +I   +     + PN  TY  +I+G CK 
Sbjct: 504 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 220 GRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           GR DE ++++D M  K E + ++  Y + I G C  G ++ A      MVE G+ +   T
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++      G+  E +EL E MG KG   +V +YNILI G  + G V +A+ I+E + 
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +   A   T+  LI  L K G + +  ++ +E                    + G + +
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV------------------RRGIRPD 725

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               N+L+N    +  ++ A  +  EM +K  +P  V+YNTL+ GLC + R  EA   + 
Sbjct: 726 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM E+G +PD++TY+ LI+G      +  AL++  + + KGF P +  YN LI GLC  G
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 845

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           + +DA  +   M +    P+  TY +L++GL
Sbjct: 846 QGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 206/397 (51%), Gaps = 26/397 (6%)

Query: 89  PDKALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVIN 143
           P +AL++ ++M       +       C + + + A   +  + E+G + P+ Y+YGTVI+
Sbjct: 499 PARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 558

Query: 144 GLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           G  K G +  A+ VFDEM  +G V+   V YN LI G+  +G    A    +R+V E  V
Sbjct: 559 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV-ERGV 617

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
              V TYN++++ L   GR  E  E+ + M       D FTY   I+G CK GNV+ A  
Sbjct: 618 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE 677

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           ++  M   G+    VTY A+I    + G+++E  +L++   R+G   ++V YN LI    
Sbjct: 678 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 737

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G +D A  I   + +K    D  T+  L+ GLC          +L        GR+ +
Sbjct: 738 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC----------LL--------GRVDE 779

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L++ M + G + +  T N+L++G+     +++A+ +  EM  KG +PT+++YN LI 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           GLCK  +  +A + VKEM+E G  PD  TY  LI GL
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 210/432 (48%), Gaps = 26/432 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N+++            L ++ RMK       + +    +H L  A     A  ++ +M  
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 476

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
             + +   T+N M+   C AGK     EL   M R    N V+YN +I G    G+V  A
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP---NAVTYNTVIAGFCSRGRVQAA 533

Query: 330 ISIWELLREKNCNADST-THGVLINGLCKNGYLNKAIQILNEVEEGGE------------ 376
           + I   +RE+   A +  T+G +I+G CK G +++A+++ +E+   GE            
Sbjct: 534 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 G+L  A    +RM + G  +   T N L++      +   A  L +EM  KG +
Sbjct: 594 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 653

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V +YN LING CK     +A    + M  +G +  ++TY+ LI  L +  ++    KL
Sbjct: 654 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 713

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + +++G  PD+ +YN LI+   ++G ++ A ++   M+K+   P+ VTYNTLM GL  
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D+A ++ + + E  ++PD+++YN  + G      + DA    N+ + +G  PT +T
Sbjct: 774 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 833

Query: 611 WHILVRAVMNNG 622
           ++ L++ +  NG
Sbjct: 834 YNALIQGLCKNG 845



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 11/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +VI  + K    D+A+ VF  M           ++    G  C + + + A  + + + E
Sbjct: 555 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 614

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+   V +Y  +++ L   G    A  + +EM  +G+  +V  YNILI+G  K+G+  +
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E +     V   VVTY  +I  L K G+  E  +++D   +     D   Y + I
Sbjct: 675 ALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +    +GN++ A  +  EM +  I  D VTYN ++ G C  G++ E  +L + M  +G  
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN LI G    G V +A+ I   +  K  N    T+  LI GLCKNG  + A  +
Sbjct: 794 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853

Query: 368 LNEVEEGG 375
           + E+ E G
Sbjct: 854 VKEMVENG 861



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 402 NSLMNGFIQASKL----ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           +SL N  + AS        ++ L+  M       +  S + L++ L        A++   
Sbjct: 417 SSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPS----APAFALFA 472

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M          T+++++  LC + K   AL+L  Q  +    P+   YN +I G CS G
Sbjct: 473 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 528

Query: 518 KVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIIS 575
           +V+ AL +   M++R  + PN  TY T++ G  K G  D+A+++++ +L +  ++P+ + 
Sbjct: 529 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 588

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G C   ++  A  + +  + RG+  T  T+++LV A+  +G  T
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 638



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T  AL  + +++     +  LF   +RR I P LV++ +                    +
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA--------------------L 732

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I ++  +   D+A ++   M +         +      LC   + ++A++ ++ + E+G+
Sbjct: 733 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 792

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +PD+ +Y T+I+G    GD+  AL + +EM  +G    ++ YN LI G  K G    A+ 
Sbjct: 793 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 852

Query: 192 IWERLVMETSVYPNVVTYNVMINGL 216
           + + +V E  + P+  TY  +I GL
Sbjct: 853 MVKEMV-ENGITPDDSTYISLIEGL 876


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 270/555 (48%), Gaps = 29/555 (5%)

Query: 78   SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK 129
            ++++A+ +  M  +A    Q M+ +        F C     C + +  +A    + +   
Sbjct: 474  ALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRY 533

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G  P+V +Y  ++ GL + G L+ A      + +     +   +N L+ G  K G    A
Sbjct: 534  GHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEA 593

Query: 190  KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +I E++V + +  P++ TY ++++G C+ G+    L M   M +     D+  Y   ++
Sbjct: 594  LDICEKMV-KNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLN 652

Query: 250  GLCKAGNVEGAERVYREMV-ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GL   G V+ A  V++E++ + G++ D + YN++++G+ + G +     +   M +    
Sbjct: 653  GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVY 712

Query: 309  -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             N  SYNIL+ G ++ G+  +++ +++ +  K    D+ T+ +LI GL + G ++ A++ 
Sbjct: 713  PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 772

Query: 368  LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            L                   +M   G   +    + L+  F + SK+ NA+ LF  M   
Sbjct: 773  LE------------------KMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCL 814

Query: 428  GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
              SP+  +++ +INGL +     +++  + EML+ G +P+   Y  L+N  C+  +ID A
Sbjct: 815  HLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 874

Query: 488  LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +L  +    G  P     + +I GLC  GK+E+A+ ++SNM +   VP + T+ TLM  
Sbjct: 875  FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHS 934

Query: 548  LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
            L K      AL +   +   RL+ D++SYN+ + GLC    +SDA +   +   +G+ P 
Sbjct: 935  LCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPN 994

Query: 608  TITWHILVRAVMNNG 622
              T+  L  A+ + G
Sbjct: 995  VTTYITLTGAMYSTG 1009



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 248/532 (46%), Gaps = 21/532 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +F KA+  L  +    L     +Y T+++  VK G    AL V ++M    ++ +
Sbjct: 165 LCTNGEFRKAEDMLQKMKSCCLSNSA-TYNTILHWYVKKGRFKAALCVLEDMERDSIQAD 223

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +  YNI+ID   +     RA  + +R+  +  + P+  TYN +ING    G+ +    ++
Sbjct: 224 IYTYNIMIDKLCRIKRSARAFLLLKRM-RKDDLTPDECTYNTLINGFFGEGKINHARCVF 282

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +        TY + I G C+   ++ A  V  EM  +G+    +TY+A+++G+C+ 
Sbjct: 283 NHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKV 342

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +    +L   +  +G  +N     ILI G  + G++ +A  I + + E   + D  T+
Sbjct: 343 SMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTY 402

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LING+C+   +++  +IL+ +++ G                  G +  A      + +
Sbjct: 403 SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYR 462

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N    N+L+  F +   +  A    + MSR   S   VS+N +I+  C   +  E
Sbjct: 463 RGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVE 522

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+S   +M+  G  P++ TY  L+ GLCQ   +  A +     L      D   +N L+ 
Sbjct: 523 AFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLL 582

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G+C  G +++AL +   M K NC+P++ TY  L+ G  + G    AL +   +LE+ + P
Sbjct: 583 GICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVP 642

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNNG 622
           D ++Y   L GL +  ++  A     + +C+ G+    I ++ L+   +  G
Sbjct: 643 DTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 694



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 231/488 (47%), Gaps = 31/488 (6%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I   VK   +L A      M + G + + V  N ++    ++G+   +K +W  L +  
Sbjct: 91  LIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGE---SKYVW--LFLRE 145

Query: 201 SV---YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           S+   +P +V T N+++N LC  G F +  +M  +MK      +S TY + +H   K G 
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKKGR 204

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYN 314
            + A  V  +M    I  D  TYN MID  CR  +    F L + M RK  L  +  +YN
Sbjct: 205 FKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRM-RKDDLTPDECTYN 263

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI G    GK++ A  ++  +  +       T+  +I+G C+N  ++KA+ +L+E    
Sbjct: 264 TLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSE---- 319

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                         M+  G   +  T ++L+NG+ + S L  A+ L  ++  +G +    
Sbjct: 320 --------------MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKT 365

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
               LI+G C+V    +A   +K MLE G  PD++TYS LING+C+  K+    ++  + 
Sbjct: 366 MCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRM 425

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G  P+  +Y  LI   C AG V+ AL+ + ++ +R  V N V +N L+   ++ G  
Sbjct: 426 QKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMI 485

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A     ++    +  + +S+N  +   C   ++ +AF   +D +  G  P   T+  L
Sbjct: 486 TEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNL 545

Query: 615 VRAVMNNG 622
           +R +   G
Sbjct: 546 LRGLCQGG 553



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 238/564 (42%), Gaps = 91/564 (16%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G K    +  +++  LV+ G+         E   R    +V   NIL++     G++ +A
Sbjct: 115 GFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKA 174

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++ ++  M++    N  TYN +++   K GRF   L + + M+++  + D +TY   I 
Sbjct: 175 EDMLQK--MKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMID 232

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LC+      A  + + M +  +  D  TYN +I+GF   GKI     ++  M R+  + 
Sbjct: 233 KLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVP 292

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +Y  +I G   N ++D+A+S+   +          T+  L+NG CK   L  A+ ++
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLM 352

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +++                    G  +N   C  L++GF Q  ++  A  + K M   G
Sbjct: 353 VDLKS------------------RGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P VV+Y+ LING+C++ +  E    +  M + G  P+ + Y+ LI   C++  + +AL
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVAL 454

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGL----------------------------------- 513
           K      ++G   +  ++N L+                                      
Sbjct: 455 KHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSY 514

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTY-------------------------------- 541
           C  GK+ +A  +Y +M +    PN+ TY                                
Sbjct: 515 CHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDE 574

Query: 542 ---NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
              N L+ G+ K G  D+AL+I   +++    PDI +Y I L G C   ++  A   L  
Sbjct: 575 KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            L +G++P T+ +  L+  ++N G
Sbjct: 635 MLEKGVVPDTVAYTCLLNGLINEG 658



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 224/511 (43%), Gaps = 44/511 (8%)

Query: 119 AKRFLNSLWEK-GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL- 176
           A + LNS+ E+ GL    Y Y   +  L+++     A++V   +   G     +  ++L 
Sbjct: 16  ALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLR 75

Query: 177 IDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE 236
           I   F   +++  + + +  V E  V    V    M          D+C           
Sbjct: 76  IISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFM----------DDC----------- 114

Query: 237 REKDSFTYC-SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             K S   C S +  L + G  +      RE +     +D  T N +++  C  G+ ++ 
Sbjct: 115 GFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKA 174

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            ++ + M +  CL N  +YN ++   ++ G+   A+ + E +   +  AD  T+ ++I+ 
Sbjct: 175 EDMLQKM-KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDK 233

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC+                    R A A  L+ RM K     +  T N+L+NGF    K+
Sbjct: 234 LCR------------------IKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKI 275

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
            +A  +F  M R+   P+V +Y T+I+G C+  R  +A S + EM   G  P  +TYS L
Sbjct: 276 NHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSAL 335

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           +NG C+   +  AL L      +G T + TM  ILI G C  G++  A Q+  +M +   
Sbjct: 336 LNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGI 395

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            P++VTY+ L++G+ +     +  EI + + +  + P+ + Y   +   C    +  A +
Sbjct: 396 DPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALK 455

Query: 595 FLNDALCRGILPTTITWHILVRAVMNNGAST 625
              D   RG++   +  + L+RA    G  T
Sbjct: 456 HFVDIYRRGLVANPVIHNALLRAFYREGMIT 486


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 213/416 (51%), Gaps = 25/416 (6%)

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
             T+N+M+  LC  G+    LE+  +M +     ++ TY + I G C  G V+ A  + R
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 266 EMVE-SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN--VVSYNILIRGLLE 322
           EM E  GI  +  TY  +I G+C+ G++ E  ++++ M  KG +    V YN LI G  +
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
            GK+D A+   + + E+       T+ +L++ L  +G   +A +++ E+  GG+G   D 
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM--GGKGLAPDV 661

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
                           +T N L+NG  +   ++ A+ +F+ MSR+G   TVV+Y  LI  
Sbjct: 662 ----------------FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 705

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L K  +  E      E + +G +PD++ Y+ LIN    S  ID A ++  +  +K   PD
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              YN L+ GLC  G+V++A +L   M +R   P+LVTYNTL+ G    GD   AL I N
Sbjct: 766 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 825

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            ++ +   P +++YN  ++GLC   +  DA   + + +  GI P   T+  L+  +
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 20/391 (5%)

Query: 160 EMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC 219
           E+  +    N V YN +I GF  +G    A +I   +     + PN  TY  +I+G CK 
Sbjct: 509 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 220 GRFDECLEMWDRM-KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
           GR DE ++++D M  K E + ++  Y + I G C  G ++ A      MVE G+ +   T
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++      G+  E +EL E MG KG   +V +YNILI G  + G V +A+ I+E + 
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +   A   T+  LI  L K G + +  ++ +E                    + G + +
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV------------------RRGIRPD 730

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
               N+L+N    +  ++ A  +  EM +K  +P  V+YNTL+ GLC + R  EA   + 
Sbjct: 731 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           EM E+G +PD++TY+ LI+G      +  AL++  + + KGF P +  YN LI GLC  G
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 850

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           + +DA  +   M +    P+  TY +L++GL
Sbjct: 851 QGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 206/397 (51%), Gaps = 26/397 (6%)

Query: 89  PDKALDVFQRMNE----IFGCEAGILCRKRQFEKAKRFLNSLWEKG-LKPDVYSYGTVIN 143
           P +AL++ ++M       +       C + + + A   +  + E+G + P+ Y+YGTVI+
Sbjct: 504 PARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 563

Query: 144 GLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           G  K G +  A+ VFDEM  +G V+   V YN LI G+  +G    A    +R+V E  V
Sbjct: 564 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV-ERGV 622

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
              V TYN++++ L   GR  E  E+ + M       D FTY   I+G CK GNV+ A  
Sbjct: 623 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE 682

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           ++  M   G+    VTY A+I    + G+++E  +L++   R+G   ++V YN LI    
Sbjct: 683 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 742

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G +D A  I   + +K    D  T+  L+ GLC          +L        GR+ +
Sbjct: 743 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC----------LL--------GRVDE 784

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           A  L++ M + G + +  T N+L++G+     +++A+ +  EM  KG +PT+++YN LI 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
           GLCK  +  +A + VKEM+E G  PD  TY  LI GL
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 210/432 (48%), Gaps = 26/432 (6%)

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           N+++            L ++ RMK       + +    +H L  A     A  ++ +M  
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 481

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEA 329
             + +   T+N M+   C AGK     EL   M R    N V+YN +I G    G+V  A
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP---NAVTYNTVIAGFCSRGRVQAA 538

Query: 330 ISIWELLREKNCNADST-THGVLINGLCKNGYLNKAIQILNEVEEGGE------------ 376
           + I   +RE+   A +  T+G +I+G CK G +++A+++ +E+   GE            
Sbjct: 539 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598

Query: 377 ------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
                 G+L  A    +RM + G  +   T N L++      +   A  L +EM  KG +
Sbjct: 599 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 658

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P V +YN LING CK     +A    + M  +G +  ++TY+ LI  L +  ++    KL
Sbjct: 659 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 718

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
             + +++G  PD+ +YN LI+   ++G ++ A ++   M+K+   P+ VTYNTLM GL  
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  D+A ++ + + E  ++PD+++YN  + G      + DA    N+ + +G  PT +T
Sbjct: 779 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 838

Query: 611 WHILVRAVMNNG 622
           ++ L++ +  NG
Sbjct: 839 YNALIQGLCKNG 850



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 11/308 (3%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM---------NEIFGCEAGILCRKRQFEKAKRFLNSLWE 128
           +VI  + K    D+A+ VF  M           ++    G  C + + + A  + + + E
Sbjct: 560 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 619

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+   V +Y  +++ L   G    A  + +EM  +G+  +V  YNILI+G  K+G+  +
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E +     V   VVTY  +I  L K G+  E  +++D   +     D   Y + I
Sbjct: 680 ALEIFENMS-RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           +    +GN++ A  +  EM +  I  D VTYN ++ G C  G++ E  +L + M  +G  
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            ++V+YN LI G    G V +A+ I   +  K  N    T+  LI GLCKNG  + A  +
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 368 LNEVEEGG 375
           + E+ E G
Sbjct: 859 VKEMVENG 866



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 402 NSLMNGFIQASKL----ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
           +SL N  + AS        ++ L+  M       +  S + L++ L        A++   
Sbjct: 422 SSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPS----APAFALFA 477

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M          T+++++  LC + K   AL+L  Q  +    P+   YN +I G CS G
Sbjct: 478 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG 533

Query: 518 KVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIIS 575
           +V+ AL +   M++R  + PN  TY T++ G  K G  D+A+++++ +L +  ++P+ + 
Sbjct: 534 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 593

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           YN  + G C   ++  A  + +  + RG+  T  T+++LV A+  +G  T
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 643



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 20  TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV 79
           T  AL  + +++     +  LF   +RR I P LV++ +                    +
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA--------------------L 737

Query: 80  IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKGL 131
           I ++  +   D+A ++   M +         +      LC   + ++A++ ++ + E+G+
Sbjct: 738 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 797

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           +PD+ +Y T+I+G    GD+  AL + +EM  +G    ++ YN LI G  K G    A+ 
Sbjct: 798 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 857

Query: 192 IWERLVMETSVYPNVVTYNVMINGL 216
           + + +V E  + P+  TY  +I GL
Sbjct: 858 MVKEMV-ENGITPDDSTYISLIEGL 881


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 264/558 (47%), Gaps = 26/558 (4%)

Query: 91  KALDVFQRMNEIFGCEAGILC----RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV 146
           K +D F+R+ +    +  +L     ++     A+    S+   G++P+V+SY  +I+   
Sbjct: 179 KVVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYA 238

Query: 147 KSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNV 206
            + DL GA+A  +EM   GV  N   Y+++I G+ + GD + A E W +  +  + + N 
Sbjct: 239 VAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD-VEAAERWFQRALSENWHHND 297

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           V YN +I+  CK G  +    +   M++   E     Y   + G      V+    V+R 
Sbjct: 298 VIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRR 357

Query: 267 M---VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
           +    E+G+    V+Y  +I+ + + GK+ +  ++   M  +G   N  +Y+++I G ++
Sbjct: 358 LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQ 417

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG-------- 374
            G    A S++E +       D  T+ +L+N  CKNG +N+A+++L  +E G        
Sbjct: 418 LGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRT 477

Query: 375 ------GEGRLAD---AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                 G  ++ D   A   V  M   G + +A T N +M+G  QA +++ A  +  EM 
Sbjct: 478 YTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMV 537

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P   SY TLI G   +   G A+ +   + E G KPD+I Y+ L+   C++ ++ 
Sbjct: 538 VAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQ 597

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
             L +  +    G   +  +YNIL+ G    G + +A  +   M+     P++ +Y + +
Sbjct: 598 STLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFI 657

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +   K GD  KA E    + ++ ++P++ +Y   + G  S S    A    ++    G++
Sbjct: 658 NACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMI 717

Query: 606 PTTITWHILVRAVMNNGA 623
           P    +H ++ ++++  A
Sbjct: 718 PDKPLYHCIMTSLLSRAA 735



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 210/466 (45%), Gaps = 35/466 (7%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R L +  E GL P V SYG +IN   K G +  AL + +EM ++G++ N   Y+++IDG+
Sbjct: 356 RRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGY 415

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + GD   A  ++E +     + P+ +TYN+++N  CK G+ +  LE+  RM+  +    
Sbjct: 416 VQLGDTANAFSVFEDMS-NAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPT 474

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             TY   I G  K G++  A    R+M  +G    A TYN ++ G  +AG++     + +
Sbjct: 475 LRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIID 534

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M   G   N  SY  LI G    G +  A   +  ++E     D   +  L+   CK G
Sbjct: 535 EMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAG 594

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
            +   + I  E                  M   G  +N Y  N L++G+ Q   +  A  
Sbjct: 595 RMQSTLAITAE------------------MAAAGVPMNNYIYNILLDGWAQRGDMWEASD 636

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           + ++M  +G +P + SY + IN  CK     +A   +++M ++G +P++  Y+ LI+G  
Sbjct: 637 IMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWA 696

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV------EDALQLYSNMKKRN 533
            +   + AL    +    G  PD  +Y+ ++  L S   V      +  L++ S M  + 
Sbjct: 697 SASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQG 756

Query: 534 CVPNLVTYNTLMDGLFK----TGDCDKALE-----IWNHILEERLR 570
              +  T       L K    +GD  +A+E      W   +EE  R
Sbjct: 757 ICVDFATAKHWQRFLIKAERQSGDLTRAVERIFPADWKAAVEEAKR 802


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 258/530 (48%), Gaps = 20/530 (3%)

Query: 112  RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
            R+    +A+ F   +    +  D  S+  +I+     G+++GA +V+D+M   G   NV 
Sbjct: 552  REGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVC 611

Query: 172  CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             Y  L+ G  + G  ++A++    L ++     +  T+N ++ G+C+ G  DE L++ ++
Sbjct: 612  TYQNLLRGLCQGGHLVQARQFMSCL-LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEK 670

Query: 232  MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
            M KN    D  TY   + G C+ G +  A  + + M+E G+  D V Y  +++G    G+
Sbjct: 671  MIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQ 730

Query: 292  IKEC-FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +K   +   E++ ++G   + ++YN L+ G L++  V+    +   + +     +S ++ 
Sbjct: 731  VKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYN 790

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGG----------------EGRLAD-AASLVNRMDKH 392
            +L++G  K G  +K++ +   +   G                E  L D A   + +M   
Sbjct: 791  ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 850

Query: 393  GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
            G   +    + L+  F + SK+ NA+ +F  M     SP+  +++ +INGL +      +
Sbjct: 851  GIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHS 910

Query: 453  YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +  + EML+ G +P+   Y  L+N  C+  +ID A +L  +    G  P     + +I G
Sbjct: 911  HKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRG 970

Query: 513  LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            LC  GK+E+A+ ++S+M +   VP + T+ TLM  L K      AL +   +   RLR D
Sbjct: 971  LCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVD 1030

Query: 573  IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++SYN+ + GLC    +SDA +   +   +G+ P   T+  L  A+ + G
Sbjct: 1031 VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTG 1080



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 253/531 (47%), Gaps = 21/531 (3%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   +F KA+  L  +    +   V +Y T+++  VK G    AL V ++M    V+ +
Sbjct: 236 LCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVLEDMERDSVQAD 294

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YNI+ID   +     RA  + +R+  +  + P+  TYN +ING  + G+ +    ++
Sbjct: 295 VYTYNIMIDKLCRIKRSTRAFLLLKRM-RKDDLTPDECTYNTLINGFFREGKINHARYVF 353

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M +        TY + I G C+   ++ A  +  EM  +G+    +TY+A+++G+C+ 
Sbjct: 354 NHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKV 413

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             +     L E +  +G  +N     ILI G  + G++ +A  I + + E   + D  T+
Sbjct: 414 SMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITY 473

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LING+C+   +++  +IL+ +++ G                  G + +A      + +
Sbjct: 474 SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYR 533

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G   N    N+L++ F +   +  A    + MSR   S   VS+N +I+  C       
Sbjct: 534 RGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVG 593

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A+S   +M+  G+ P++ TY  L+ GLCQ   +  A +     L   F  D   +N L+ 
Sbjct: 594 AFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLL 653

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G+C  G +++AL L   M K NC+P++ TY  L+ G  + G    AL I   +LE+ + P
Sbjct: 654 GICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVP 713

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCR-GILPTTITWHILVRAVMNN 621
           D ++Y   L GL +  ++  A    ++ +C+ G+    I ++ L+   + +
Sbjct: 714 DTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 215/445 (48%), Gaps = 18/445 (4%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            +CR    ++A      + +    PD+++Y  +++G  + G +L AL +   M E+GV  +
Sbjct: 655  ICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPD 714

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
             V Y  L++G   +G    A  ++  ++ +  +Y + + YN ++NG  K    +    M 
Sbjct: 715  TVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMM 774

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
              M +NE   +S +Y   +HG  K G    +  +Y+ MV  GI  D VTY  +I G    
Sbjct: 775  SDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 834

Query: 290  GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            G I    +  E M  +G   + + ++ILI    E  K+  A+ ++  ++  + +  S T 
Sbjct: 835  GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTF 894

Query: 349  GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
              +INGL + GYL+ + ++L+E+ + G                  G +  A  L   M  
Sbjct: 895  SAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKA 954

Query: 392  HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
             G        +S++ G  +  KLE A+ +F  M R G  PTV ++ TL++ LCK  +  +
Sbjct: 955  IGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIAD 1014

Query: 452  AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
            A    + M     + D+++Y++LI GLC+ K I  AL L  +   KG  P++T Y  L  
Sbjct: 1015 ALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTG 1074

Query: 512  GLCSAGKVEDALQLYSNMKKRNCVP 536
             + S G+V++  +L  ++++R  +P
Sbjct: 1075 AMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 231/488 (47%), Gaps = 31/488 (6%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++   VK   +L A      M + G + + V  N +++   ++G+   +K +W  L +  
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGE---SKHVW--LFLRE 216

Query: 201 SV---YP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           S+   +P  V T N+++N LC  G F +  +M  +MK      +S TY + +H   K G 
Sbjct: 217 SLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGR 275

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYN 314
            + A  V  +M    +  D  TYN MID  CR  +    F L + M RK  L  +  +YN
Sbjct: 276 FKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM-RKDDLTPDECTYN 334

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            LI G    GK++ A  ++  +  +N      T+  +I+G C+N  ++KA+ IL+E    
Sbjct: 335 TLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE---- 390

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
                         M   G   +  T ++L+NG+ + S L  AI+L +++  +G +    
Sbjct: 391 --------------MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
               LI+G C+V    +A   +K M E G  PD+ITYS LING+C+  K+    ++  + 
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM 496

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
            + G  P+  +Y  LI   C AG V++AL+ + ++ +R  V N V +N L+   ++ G  
Sbjct: 497 QKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMI 556

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
            +A     ++    +  D +S+N  +   C    +  AF   +D +  G  P   T+  L
Sbjct: 557 TEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNL 616

Query: 615 VRAVMNNG 622
           +R +   G
Sbjct: 617 LRGLCQGG 624



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/564 (23%), Positives = 238/564 (42%), Gaps = 91/564 (16%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G K    S  T++N LV+ G+         E   R     V   NIL++     G++ +A
Sbjct: 186 GFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKA 245

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++ ++  M++    N VTYN +++   K GRF   L + + M+++  + D +TY   I 
Sbjct: 246 EDMLQK--MKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMID 303

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
            LC+      A  + + M +  +  D  TYN +I+GF R GKI     ++  M R+  + 
Sbjct: 304 KLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVP 363

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V +Y  +I G   N ++D+A+SI   ++         T+  L+NG CK   L  AI ++
Sbjct: 364 SVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM 423

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +++                    G  +N      L++GF Q  ++  A  + K M   G
Sbjct: 424 EDLKS------------------RGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P V++Y+ LING+C++ +  E    +  M + G  P+ + Y+ LI   C++  +  AL
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGL----------------------------------- 513
           K      ++G   +  ++N L+H                                     
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSY 585

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTY-------------------------------- 541
           C  G +  A  +Y +M +    PN+ TY                                
Sbjct: 586 CHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDE 645

Query: 542 ---NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
              N L+ G+ + G  D+AL++   +++    PDI +Y I L G C   ++  A   L  
Sbjct: 646 KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            L +G++P T+ +  L+  ++N G
Sbjct: 706 MLEKGVVPDTVAYTCLLNGLINEG 729



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 177/380 (46%), Gaps = 18/380 (4%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + ++ L + G  +      RE +     +   T N +++  C  G+ ++  ++ + M   
Sbjct: 196 TILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSC 255

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              N V+YN ++   ++ G+   A+ + E +   +  AD  T+ ++I+ LC+        
Sbjct: 256 HISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCR-------- 307

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                       R   A  L+ RM K     +  T N+L+NGF +  K+ +A ++F  M 
Sbjct: 308 ----------IKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHML 357

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           R+   P+V +Y T+I+G C+  R  +A S + EM   G  P  +TYS L+NG C+   + 
Sbjct: 358 RQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLG 417

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A+ L      +G T + TM  ILI G C  G++  A Q+  +M +    P+++TY+ L+
Sbjct: 418 PAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALI 477

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +G+ +     +  EI + + +  + P+ + Y   +   C    + +A +   D   RG++
Sbjct: 478 NGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLV 537

Query: 606 PTTITWHILVRAVMNNGAST 625
              +  + L+ A    G  T
Sbjct: 538 ANPVIHNALLHAFYREGMIT 557



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 416 NAIF--LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            AIF  L + +SR   +  VV +  L+    K  +  +A   V  M + G+K   ++ + 
Sbjct: 138 TAIFTSLLRTISRFDPTNHVV-FELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNT 196

Query: 474 LINGLCQ---SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG---KVEDALQLYS 527
           ++N L +   SK + + L+   + L + F   VT  NIL++ LC+ G   K ED LQ   
Sbjct: 197 ILNALVEEGESKHVWLFLR---ESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQ--- 250

Query: 528 NMKKRNC-VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             K ++C + N VTYNT++    K G    AL +   +  + ++ D+ +YNI +  LC  
Sbjct: 251 --KMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRI 308

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            R + AF  L       + P   T++ L+      G
Sbjct: 309 KRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREG 344


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 263/554 (47%), Gaps = 48/554 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE------ 163
           LC     ++A +FL+ + + G+ PD  SY T+I+G  K G+ + A A+ DE+ E      
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITH 230

Query: 164 ----------------------RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
                                  G + +VV ++ +I+   K G  +    +  R + E S
Sbjct: 231 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG-LLLREMEEMS 289

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           VYPN VTY  +++ L K   +   L ++ +M       D   Y   + GL KAG++  AE
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGL 320
           + ++ ++E     + VTY A++DG C+AG +    F + +++ +    NVV+Y+ +I G 
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-----VEEGG 375
           ++ G ++EA+S+   + ++N   +  T+G +I+GL K G    AI++  E     VEE  
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469

Query: 376 E------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GR+ +   LV  M   G  L+     SL++ F +    E A+   +E
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G    VVSYN LI+G+ K  + G  +++ K M EKG +PD+ T+++++N   +   
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGD 588

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            +  LKL  +    G  P +   NI++  LC  GK+E+A+ + + M      PNL TY  
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            +D   K    D   +    +L   ++     YN  +  LC       A   + D   RG
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708

Query: 604 ILPTTITWHILVRA 617
            +P T+T++ L+  
Sbjct: 709 FIPDTVTFNSLMHG 722



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 247/515 (47%), Gaps = 23/515 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +     +A++    L E    P+V +Y  +++GL K+GDL  A  +  +M E+ V  N
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +I+G+ KKG    A  +  ++  + +V PN  TY  +I+GL K G+ +  +E+ 
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+    E++++   + ++ L + G ++  + + ++MV  G+ +D + Y ++ID F + 
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G  +      E M  +G   +VVSYN+LI G+L+ GKV  A   ++ +REK    D  T 
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATF 576

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++N   K G                EG L     L ++M   G K +  +CN ++   
Sbjct: 577 NIMMNSQRKQG--------------DSEGIL----KLWDKMKSCGIKPSLMSCNIVVGML 618

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K+E AI +  +M      P + +Y   ++   K +R    +   + +L  G K   
Sbjct: 619 CENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSR 678

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI  LC+      A  +      +GF PD   +N L+HG      V  AL  YS 
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCS 587
           M +    PN+ TYNT++ GL   G   K ++ W   ++ R +RPD  +YN  + G     
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAG-LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            M  +     + +  G++P T T+++L+    N G
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 218/472 (46%), Gaps = 27/472 (5%)

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           L GA      M   GV  +   +N LI  F   G       +    ++   V P+V   N
Sbjct: 74  LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 133

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           V+I+  CK GR    + +   ++      D+ TY + I GLC+ G  + A +   EMV+ 
Sbjct: 134 VLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           GI  D V+YN +IDGFC+ G       L + +     LN++++ IL+        ++EA 
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE---LNLITHTILLSSYYNLHAIEEA- 246

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
             +  +     + D  T   +IN LCK G          +V EGG         L+  M+
Sbjct: 247 --YRDMVMSGFDPDVVTFSSIINRLCKGG----------KVLEGG--------LLLREME 286

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +     N  T  +L++   +A+   +A+ L+ +M  +G    +V Y  L++GL K     
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 346

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA    K +LE    P+++TY+ L++GLC++  +  A  +  Q L+K   P+V  Y+ +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +G    G +E+A+ L   M+ +N VPN  TY T++DGLFK G  + A+E+   +    + 
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +    +  +  L    R+ +    + D + +G+    I +  L+      G
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 251/587 (42%), Gaps = 67/587 (11%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T   L DS  +   Y H+  L+  ++ R I   LVV+   +  L +       E   
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +++    N +P+            +      LC+      A+  +  + EK + P+V 
Sbjct: 353 KMLLE---DNQVPNVV---------TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y ++ING VK G L  A+++  +M ++ V  N   Y  +IDG FK G    A E+ + +
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI-------- 248
            +   V  N    + ++N L + GR  E   +   M       D   Y S I        
Sbjct: 461 RL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519

Query: 249 ---------------------------HGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                       G+ K G V GA+  Y+ M E GI  D  T+N 
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNI 578

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           M++   + G  +   +LW+ M   G   +++S NI++  L ENGK++EAI I   +    
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638

Query: 341 CNADSTTHGVLINGLCKN-----------GYLNKAIQILNEVEEG------GEGRLADAA 383
            + + TT+ + ++   K+             L+  I++  +V           G    AA
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            ++  M+  G   +  T NSLM+G+   S +  A+  +  M   G SP V +YNT+I GL
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
                  E   ++ EM  +G +PD  TY+ LI+G  +   +  ++ + C+ +  G  P  
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT 818

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           + YN+LI    + GK+  A +L   M KR   PN  TY T++ GL K
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 69/390 (17%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + E+G+  DV SY  +I+G++K G + GA   +  M E+G+E ++  +NI+++   K+GD
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 588

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM------------- 232
                ++W+++     + P++++ N+++  LC+ G+ +E + + ++M             
Sbjct: 589 SEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 647

Query: 233 ------KKNEREKDSF----------------TYCSFIHGLCKAGNVEGAERVYREMVES 270
                  K++R    F                 Y + I  LCK G  + A  V  +M   
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEA 329
           G   D VT+N+++ G+     +++    + VM   G   NV +YN +IRGL + G + E 
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
                 ++ +    D  T+  LI+G  K G +  ++ I  E+       +AD        
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM-------IAD-------- 812

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV--- 446
              G      T N L++ F    K+  A  L KEM ++G SP   +Y T+I+GLCK+   
Sbjct: 813 ---GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 869

Query: 447 ---------ERFGEAYSFVKEML-EKGWKP 466
                        EA   +KEM+ EKG+ P
Sbjct: 870 PDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 235/476 (49%), Gaps = 22/476 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           AK    S+ E G K D  ++  +   L +       + +F  +  RGV      Y +++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 179 GFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
           G    G   +A E+   L   + VY P V  YN +I GLC+  R  +  ++ ++M +   
Sbjct: 63  GLCGAGMANQALELVREL---SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
             + FTY   ++GLC++   + A  V++EM  +G   + +TY  +I    RAG+I E   
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 298 LW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           +  E    +   +V++   ++ GL +  ++D+A+   E +R+     +  T+  L++G  
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           ++G L++ I+   E +                  + G  L A      ++   +A  L+ 
Sbjct: 240 QHGELDRVIRFFEEEKA-----------------RKGGSLEAAAYPGYLDALCKAGYLDR 282

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A    +E+ + G  P VV+Y+ LIN   +  +F  +   +++M   G KPD++TYS LIN
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC+ +K   A +L       G  P+V  YN ++ GLC +GK+++  ++Y  M K  C P
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
           ++VTY+ +M+GL K G  D A++++  I   R  PD  +Y++ +  LC   ++ +A
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 261/509 (51%), Gaps = 27/509 (5%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           ++ F   A  L R+ +F +  R    L  +G+     +Y  V++GL  +G    AL +  
Sbjct: 19  SQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVR 78

Query: 160 EMFERGVET-NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           E+   GV T  V  YN +I G  +    M A ++ E++V E S+ PNV TY +++NGLC+
Sbjct: 79  EL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMV-EESIVPNVFTYTILLNGLCR 135

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             +     E++  MK+N  + +  TY + I  L +AG ++ A RV  E     +  D +T
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
              ++ G C+A ++ +  +  E M + G   N V+Y+ L+ G  ++G++D  I  +E  +
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 338 -EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
             K  + ++  +   ++ LCK GYL++A + + E+ + G                     
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG------------------VVP 297

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  T + L+N F +A + + ++ L ++M R G  P VV+Y+TLIN LCK  +F +A+  +
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           + M   G  P+++TY+ +++GLC+S K+D   ++    L+   +PDV  Y+I+++GL  A
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G ++ A++L+  +K     P+   Y+ ++  L + G  ++A  ++ H +E  +  D I  
Sbjct: 418 GMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY-HGMEVTVAGDNICR 476

Query: 577 NIT--LKGLCSCSRMSDAFEFLNDALCRG 603
            +   +  LC   R   A   +  A  RG
Sbjct: 477 ALAGLVAALCDAKRTDSARRIVEVARERG 505



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 213/444 (47%), Gaps = 37/444 (8%)

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++ ER V+E     +   + ++   L +  +F E + ++  +          TY   +
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
            GLC AG    A  + RE+  SG++   V  YN +I G CRA ++ + +++ E M  +  
Sbjct: 62  DGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + NV +Y IL+ GL  + K   A  +++ ++   C  +  T+G LI  L + G +++A++
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 367 ILNEVEEGGEGRLADAASLVNRMDKHGCKL--NAYTCNSLMNGFIQASKLENAIFLFKEM 424
           ++                    +++   +L  +  TC +++ G  +AS+L++A+   +EM
Sbjct: 180 VM--------------------IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219

Query: 425 SRKGCSPTVVSYNTLING------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            + G  P  V+Y+ L++G      L +V RF     F +E   KG   +   Y   ++ L
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRF-----FEEEKARKGGSLEAAAYPGYLDAL 274

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++  +D A K   +  Q G  PDV  Y++LI+    AG+ + +L+L  +M++    P++
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDV 334

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY+TL++ L K      A  +   +      P++++YN  + GLC   +M +       
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
            L     P  +T+ I++  +   G
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAG 418


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 263/554 (47%), Gaps = 48/554 (8%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE------ 163
           LC     ++A +FL+ + + G+ PD  SY T+I+G  K G+ + A A+ DE+ E      
Sbjct: 173 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITH 232

Query: 164 ----------------------RGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETS 201
                                  G + +VV ++ +I+   K G  +    +  R + E S
Sbjct: 233 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG-LLLREMEEMS 291

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           VYPN VTY  +++ L K   +   L ++ +M       D   Y   + GL KAG++  AE
Sbjct: 292 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 351

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCLNVVSYNILIRGL 320
           + ++ ++E     + VTY A++DG C+AG +    F + +++ +    NVV+Y+ +I G 
Sbjct: 352 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 411

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE-----VEEGG 375
           ++ G ++EA+S+   + ++N   +  T+G +I+GL K G    AI++  E     VEE  
Sbjct: 412 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 471

Query: 376 E------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GR+ +   LV  M   G  L+     SL++ F +    E A+   +E
Sbjct: 472 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 531

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M  +G    VVSYN LI+G+ K  + G  +++ K M EKG +PD+ T+++++N   +   
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGD 590

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            +  LKL  +    G  P +   NI++  LC  GK+E+A+ + + M      PNL TY  
Sbjct: 591 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 650

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            +D   K    D   +    +L   ++     YN  +  LC       A   + D   RG
Sbjct: 651 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 710

Query: 604 ILPTTITWHILVRA 617
            +P T+T++ L+  
Sbjct: 711 FIPDTVTFNSLMHG 724



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 247/515 (47%), Gaps = 23/515 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +     +A++    L E    P+V +Y  +++GL K+GDL  A  +  +M E+ V  N
Sbjct: 341 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 400

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV Y+ +I+G+ KKG    A  +  ++  + +V PN  TY  +I+GL K G+ +  +E+ 
Sbjct: 401 VVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 459

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+    E++++   + ++ L + G ++  + + ++MV  G+ +D + Y ++ID F + 
Sbjct: 460 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 519

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G  +      E M  +G   +VVSYN+LI G+L+ GKV  A   ++ +REK    D  T 
Sbjct: 520 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATF 578

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +++N   K G                EG L     L ++M   G K +  +CN ++   
Sbjct: 579 NIMMNSQRKQG--------------DSEGIL----KLWDKMKSCGIKPSLMSCNIVVGML 620

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  K+E AI +  +M      P + +Y   ++   K +R    +   + +L  G K   
Sbjct: 621 CENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSR 680

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
             Y+ LI  LC+      A  +      +GF PD   +N L+HG      V  AL  YS 
Sbjct: 681 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 740

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER-LRPDIISYNITLKGLCSCS 587
           M +    PN+ TYNT++ GL   G   K ++ W   ++ R +RPD  +YN  + G     
Sbjct: 741 MMEAGISPNVATYNTIIRGLSDAG-LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 799

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            M  +     + +  G++P T T+++L+    N G
Sbjct: 800 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 218/472 (46%), Gaps = 27/472 (5%)

Query: 151 LLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYN 210
           L GA      M   GV  +   +N LI  F   G       +    ++   V P+V   N
Sbjct: 76  LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 135

Query: 211 VMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVES 270
           V+I+  CK GR    + +   ++      D+ TY + I GLC+ G  + A +   EMV+ 
Sbjct: 136 VLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 192

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAI 330
           GI  D V+YN +IDGFC+ G       L + +     LN++++ IL+        ++EA 
Sbjct: 193 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE---LNLITHTILLSSYYNLHAIEEA- 248

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
             +  +     + D  T   +IN LCK G          +V EGG         L+  M+
Sbjct: 249 --YRDMVMSGFDPDVVTFSSIINRLCKGG----------KVLEGG--------LLLREME 288

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           +     N  T  +L++   +A+   +A+ L+ +M  +G    +V Y  L++GL K     
Sbjct: 289 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 348

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           EA    K +LE    P+++TY+ L++GLC++  +  A  +  Q L+K   P+V  Y+ +I
Sbjct: 349 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 408

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           +G    G +E+A+ L   M+ +N VPN  TY T++DGLFK G  + A+E+   +    + 
Sbjct: 409 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 468

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +    +  +  L    R+ +    + D + +G+    I +  L+      G
Sbjct: 469 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 520



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 251/587 (42%), Gaps = 67/587 (11%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T   L DS  +   Y H+  L+  ++ R I   LVV+   +  L +       E   
Sbjct: 295 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 354

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
             +++    N +P+            +      LC+      A+  +  + EK + P+V 
Sbjct: 355 KMLLE---DNQVPNVV---------TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 402

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y ++ING VK G L  A+++  +M ++ V  N   Y  +IDG FK G    A E+ + +
Sbjct: 403 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI-------- 248
            +   V  N    + ++N L + GR  E   +   M       D   Y S I        
Sbjct: 463 RL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 521

Query: 249 ---------------------------HGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
                                       G+ K G V GA+  Y+ M E GI  D  T+N 
Sbjct: 522 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNI 580

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           M++   + G  +   +LW+ M   G   +++S NI++  L ENGK++EAI I   +    
Sbjct: 581 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 640

Query: 341 CNADSTTHGVLINGLCKN-----------GYLNKAIQILNEVEEG------GEGRLADAA 383
            + + TT+ + ++   K+             L+  I++  +V           G    AA
Sbjct: 641 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 700

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            ++  M+  G   +  T NSLM+G+   S +  A+  +  M   G SP V +YNT+I GL
Sbjct: 701 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 760

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
                  E   ++ EM  +G +PD  TY+ LI+G  +   +  ++ + C+ +  G  P  
Sbjct: 761 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT 820

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
           + YN+LI    + GK+  A +L   M KR   PN  TY T++ GL K
Sbjct: 821 STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 69/390 (17%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           + E+G+  DV SY  +I+G++K G + GA   +  M E+G+E ++  +NI+++   K+GD
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 590

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM------------- 232
                ++W+++     + P++++ N+++  LC+ G+ +E + + ++M             
Sbjct: 591 SEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 649

Query: 233 ------KKNEREKDSF----------------TYCSFIHGLCKAGNVEGAERVYREMVES 270
                  K++R    F                 Y + I  LCK G  + A  V  +M   
Sbjct: 650 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 709

Query: 271 GIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEA 329
           G   D VT+N+++ G+     +++    + VM   G   NV +YN +IRGL + G + E 
Sbjct: 710 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 769

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
                 ++ +    D  T+  LI+G  K G +  ++ I  E+       +AD        
Sbjct: 770 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM-------IAD-------- 814

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV--- 446
              G      T N L++ F    K+  A  L KEM ++G SP   +Y T+I+GLCK+   
Sbjct: 815 ---GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 871

Query: 447 ---------ERFGEAYSFVKEML-EKGWKP 466
                        EA   +KEM+ EKG+ P
Sbjct: 872 PDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 901


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 221/428 (51%), Gaps = 18/428 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++ T+  P++V +  + + L +   +   + +  +M+      D  +    I+  C+  +
Sbjct: 82  MVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCH 141

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           V+    V  ++++ G+  + +T++ +I+GFC  GKI    EL++VM  +G   NV SY+I
Sbjct: 142 VDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSI 201

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I+GL   GK  E I + E ++   C  D   +  +++ LCK+  +N+A+ I  +++  G
Sbjct: 202 IIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTG 261

Query: 376 -----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                             GR  +A  L+N M       +    + L++   +  ++  A 
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 321

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            + K M+  G  P V +YNTL+NG C      EA    + M+ KG  PD+ ++S+L+NG 
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++K+ID A +L  +   +G  PD   YN LI GLC A +  +A +L+ +M      PNL
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           VTY+ L+D L K G  D+A+ ++  +    L+PD+++YNI + G+C   +  DA E   +
Sbjct: 442 VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAE 501

Query: 599 ALCRGILP 606
              +G+ P
Sbjct: 502 LSVKGLQP 509



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 239/470 (50%), Gaps = 20/470 (4%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG     L R + ++        +   G+  DV S   +IN   +   +    +V  ++ 
Sbjct: 94  FGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKII 153

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           + G+E NV+ ++ LI+GF  +G   RA E+++ +V      PNV +Y+++I GLC+ G+ 
Sbjct: 154 KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR-GYKPNVHSYSIIIKGLCRVGKT 212

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
            E +++ + MK    E D   Y + +  LCK   V  A  ++ +M  +GI    VTY ++
Sbjct: 213 TEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSL 272

Query: 283 IDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G    G+ KE F L  E+ G     ++V++++LI  + + G+V EA  I + + E   
Sbjct: 273 IHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  T+  L+NG C    + +A ++   +    +GR+ D  S                 
Sbjct: 333 EPDVATYNTLMNGYCLRMEVVEARKVFEVMIS--KGRMPDVFSF---------------- 374

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           + L+NG+ +A +++ A  LF EM+ +G  P  VSYNTLI+GLC+  R  EA    K+M  
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
            G+ P+++TYS+L++ L +   +D A+ L       G  PD+  YNI+I G+C  GK +D
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD 494

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           A +L++ +  +   PN       +DG+ K G  D+A + +  + ++   P
Sbjct: 495 ARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 229/480 (47%), Gaps = 20/480 (4%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R    A    N +      P +  +G + + LV+       +++  +M   G+  +V+  
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            ILI+ F +         +  +++ +  + PNV+T++ +ING C  G+    +E++D M 
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKII-KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
               + +  +Y   I GLC+ G      ++   M   G   D V YN ++D  C+   + 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
           E   ++  M   G L  VV+Y  LI GL   G+  EA  +   ++  N   D     VLI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           + +CK                  EG +++A  ++  M + G + +  T N+LMNG+    
Sbjct: 309 DIMCK------------------EGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRM 350

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           ++  A  +F+ M  KG  P V S++ L+NG CK +R  EA     EM  +G  PD ++Y+
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYN 410

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            LI+GLCQ+++   A +L       G+ P++  Y+IL+  L   G ++ A+ L+  M+  
Sbjct: 411 TLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS 470

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P+LVTYN ++DG+ K G    A E++  +  + L+P+      T+ G+C    + +A
Sbjct: 471 GLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 193/401 (48%), Gaps = 19/401 (4%)

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
           ++ L  ++ M           +      L +  + +    + ++M  +GI  D ++   +
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I+ FCR   +   F +   + + G   NV++++ LI G    GK+  AI +++++  +  
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  ++ ++I GLC+ G   + I++L                    M   GC+ +    
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEH------------------MKVVGCEPDVVIY 234

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++++   +   +  A+ +F +M   G  PTVV+Y +LI+GL  + R+ EA+  + EM  
Sbjct: 235 NTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG 294

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
               PD++ +S+LI+ +C+  ++  A  +     + G  PDV  YN L++G C   +V +
Sbjct: 295 GNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE 354

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A +++  M  +  +P++ +++ L++G  K    D+A ++++ +    L PD +SYN  + 
Sbjct: 355 ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLIS 414

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           GLC   R  +A E   D    G  P  +T+ IL+  +   G
Sbjct: 415 GLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQG 455



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 199/432 (46%), Gaps = 48/432 (11%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           VI+   L+N    E     A+ LFD      GY  + H +  I++ L        V ++L
Sbjct: 161 VITFSTLINGFCIEGKIGRAIELFDVMVAR-GYKPNVHSYSIIIKGLCRVGKTTEVIKLL 219

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
           E +++    C  DV +        N++ D+                  LC+ R   +A  
Sbjct: 220 EHMKVVG--CEPDVVIY-------NTIVDR------------------LCKDRLVNEAVH 252

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               +   G+ P V +Y ++I+GL   G    A  + +EM    +  ++V +++LID   
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+G+   A+ I + +  E  V P+V TYN ++NG C      E  ++++ M    R  D 
Sbjct: 313 KEGEVSEARVILKTMT-EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F++   ++G CKA  ++ A++++ EM   G+  D V+YN +I G C+A +  E  EL++ 
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 302 MGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G   N+V+Y+IL+  L + G +D+A+ ++  +       D  T+ ++I+G+CK   
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK--- 488

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                           G+  DA  L   +   G + N + C   ++G  +   L+ A   
Sbjct: 489 ---------------YGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKA 533

Query: 421 FKEMSRKGCSPT 432
           F++M +  CSP 
Sbjct: 534 FRQMEKDDCSPA 545



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 105/209 (50%)

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           + +A+  F  M      P++V +  L + L +++ +    S  K+M   G   D+++ ++
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           LIN  C+   +D    +  + ++ G  P+V  ++ LI+G C  GK+  A++L+  M  R 
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAF 593
             PN+ +Y+ ++ GL + G   + +++  H+      PD++ YN  +  LC    +++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 594 EFLNDALCRGILPTTITWHILVRAVMNNG 622
                    GILPT +T+  L+  + N G
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLG 280



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/144 (16%), Positives = 59/144 (40%)

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
           + I+ AL      +     P +  +  L   L      +  + L   M+      ++++ 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L++   +    D    +   I++  L P++I+++  + G C   ++  A E  +  + 
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 602 RGILPTTITWHILVRAVMNNGAST 625
           RG  P   ++ I+++ +   G +T
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTT 213


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 237/488 (48%), Gaps = 21/488 (4%)

Query: 130  GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            G+ PDV     V+  L  +       AV +EM E G+E ++V YN L+D F K+G   + 
Sbjct: 1079 GVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKV 1138

Query: 190  KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
              + + +    S   PN VTYNV+I GL + G  +E  E+ + M+ +++   SFTY   I
Sbjct: 1139 AMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS-SFTYNPLI 1197

Query: 249  HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
             GL   G V+    +  EM   GI    VTYNAMI G  ++G ++     +  M   G L
Sbjct: 1198 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 1257

Query: 309  -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             +V++YN L+ G  + G + EA+ ++  LR         T+ +LI+G C+ G L +A +I
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA-RI 1316

Query: 368  LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            L E                  M + GC  N  T   LM G +    L  A   F EM  K
Sbjct: 1317 LKE-----------------EMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359

Query: 428  GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
            G  P   +YNT I     +     A+   + ++ +G   D +TY++LI+GLC++  +  A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419

Query: 488  LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
             +L  + +  G  PD   Y  LIH  C  G + +A ++++NM     +P+ VT+  ++  
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479

Query: 548  LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
              + G+   A   +  +LEE + P+ I+YN+ +  LC   R   A    ++ L RG++  
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539

Query: 608  TITWHILV 615
              T+ +L+
Sbjct: 1540 KYTYTLLI 1547



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 227/476 (47%), Gaps = 22/476 (4%)

Query: 128  EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE--TNVVCYNILIDGFFKKGD 185
            E G++P + +Y T+++  +K G       +  EM  RG     N V YN++I G  +KGD
Sbjct: 1112 ELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGD 1171

Query: 186  YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
               A E+ E   M  S   +  TYN +I GL   G   +  ++   M+         TY 
Sbjct: 1172 LEEAAELVEG--MRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 246  SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
            + IHGL ++G VE A+  + EM   G+  D +TYN++++G+C+AG +KE   L+  + R 
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 306  G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
            G    V++YNILI G    G ++EA  + E + E+ C  +  T+ +L+ G      L  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 365  IQILNEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +  +E+   G                  G +A A  L   +   G   +  T N L++G
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 408  FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
              +   L++A  L  +M   G  P  ++Y  LI+  C+     EA      M+  G  P 
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 468  MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             +T++++I+  C+   +  A     + L++G  P+   YN+LIH LC  G+ + A   + 
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 528  NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
             M +R  V N  TY  L+DG  K G+ + A+  +  + +  + PD +++   LKG 
Sbjct: 1530 EMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 191/380 (50%), Gaps = 21/380 (5%)

Query: 263  VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--CL-NVVSYNILIRG 319
            V+ EM+E GI    VTYN ++D F + G+  +   L + M  +G  CL N V+YN++I G
Sbjct: 1106 VHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 1165

Query: 320  LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
            L   G ++EA  + E +R     A S T+  LI GL   G + K   +  E+E  G    
Sbjct: 1166 LTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 1224

Query: 376  ------------EGRLADAASL-VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                        +  L +AA +    M   G   +  T NSL+NG+ +A  L+ A+ LF 
Sbjct: 1225 VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 1284

Query: 423  EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            ++ R G +PTV++YN LI+G C++    EA    +EM E+G  P++ TY++L+ G    +
Sbjct: 1285 DLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVR 1344

Query: 483  KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
             + MA +   + L KG  PD   YN  I      G +  A +L   +       + VTYN
Sbjct: 1345 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYN 1404

Query: 543  TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
             L+ GL KTG+   A E+   ++   L+PD I+Y   +   C    + +A +  N+ +  
Sbjct: 1405 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 1464

Query: 603  GILPTTITWHILVRAVMNNG 622
            G+LP+ +T+ +++ A    G
Sbjct: 1465 GLLPSAVTFTVIIHAYCRRG 1484



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 2/266 (0%)

Query: 111  CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            CR    E+A+     + E+G  P+V +Y  ++ G +    L  A   FDEM  +G++ + 
Sbjct: 1306 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDC 1365

Query: 171  VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
              YN  I      GD  RA E+ E L++E  +  + VTYN++I+GLCK G   +  E+  
Sbjct: 1366 FAYNTRICAELILGDIARAFELREVLMLE-GISSDTVTYNILIHGLCKTGNLKDAKELQM 1424

Query: 231  RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +M  N  + D  TY   IH  C+ G +  A +++  M+  G+   AVT+  +I  +CR G
Sbjct: 1425 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 1484

Query: 291  KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
             +   +  +  M  +G   N ++YN+LI  L   G+   A   +  + E+   A+  T+ 
Sbjct: 1485 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 1544

Query: 350  VLINGLCKNGYLNKAIQILNEVEEGG 375
            +LI+G CK G    A++   E+ + G
Sbjct: 1545 LLIDGNCKVGNWEDAMRFYFEMHQNG 1570



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 133/259 (51%), Gaps = 4/259 (1%)

Query: 114  RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
            R    A+ F + +  KGL+PD ++Y T I   +  GD+  A  + + +   G+ ++ V Y
Sbjct: 1344 RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTY 1403

Query: 174  NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
            NILI G  K G+   AKE+  ++V    + P+ +TY  +I+  C+ G   E  ++++ M 
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMV-SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462

Query: 234  KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
             +     + T+   IH  C+ GN+  A   +R+M+E G+  + +TYN +I   CR G+ +
Sbjct: 1463 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 1522

Query: 294  -ECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
                   E++ R    N  +Y +LI G  + G  ++A+  +  + +   + D  TH  L+
Sbjct: 1523 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582

Query: 353  NGLCKNGYLNKAIQILNEV 371
             G   +G+++  I+ L+ V
Sbjct: 1583 KGF--DGHVHHTIEYLDNV 1599



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 1/177 (0%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            LC+    + AK     +   GL+PD  +Y  +I+   + G L  A  +F+ M   G+  +
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
             V + ++I  + ++G+   A   W R ++E  V PN +TYNV+I+ LC+ GR       +
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYG-WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 1528

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
              M +     + +TY   I G CK GN E A R Y EM ++GI  D +T+ A++ GF
Sbjct: 1529 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 227/430 (52%), Gaps = 25/430 (5%)

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           VK+  +  A   F    +   E + V YN L++GFFK GD  +A  ++    M+ S    
Sbjct: 113 VKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGE--MKDSGIAV 170

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           + ++N+++ GLC  G+     E++  M       +  +Y   I GLCK+  V+ A  +++
Sbjct: 171 LRSHNIVLRGLCSGGKISMAWEVFKDMS-GIFSPNLISYTIMIDGLCKSRKVDKAITLFK 229

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENG 324
           +MV+  I+ D VTY A+IDG  +  ++KE ++L+E    KGC   VV+YN +I GL + G
Sbjct: 230 QMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289

Query: 325 KVDEAISIWE-LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
           +++ A+++++ ++RE +   D  T+  LINGL  +    KA ++  E             
Sbjct: 290 RIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEE------------- 336

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVVSYNTLING 442
                M   GC  +  T N+L++G  ++   + A+ +F++M     C P V++Y  LI+ 
Sbjct: 337 -----MLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDR 391

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
            CKV+R G+A    KEM  +   PD +T++ +I  LC+  +ID A +L  + + K   PD
Sbjct: 392 FCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPD 450

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
             ++N ++ G C   +++DA +L+  M    C P L TY  L+ G  +TG    AL +++
Sbjct: 451 SVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYH 510

Query: 563 HILEERLRPD 572
            ++E    P+
Sbjct: 511 EMIEMGFPPE 520



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 223/443 (50%), Gaps = 33/443 (7%)

Query: 89  PDKALDVFQ-------RMNEIFGCE--AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYG 139
           P+ A +VFQ         +  F C     +  + R+ E A  F  S  +   +PD  SY 
Sbjct: 82  PNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYN 141

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
           T++NG  K+GD+  ALA+F EM + G+   +  +NI++ G    G    A E+++   M 
Sbjct: 142 TLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKD--MS 198

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
               PN+++Y +MI+GLCK  + D+ + ++ +M       D  TY + I GL K   V+ 
Sbjct: 199 GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKE 258

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--NVVSYNILI 317
           A  ++ E    G     VTYN MIDG C+ G+I+    L++ M R+  L  ++ +Y+ LI
Sbjct: 259 AYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALI 318

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE- 376
            GL  + + ++A  ++E + +  C+ D  T+  L++GLCK+G  +KA++I  ++  G   
Sbjct: 319 NGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVC 378

Query: 377 -----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
                             RL DA  L   M+      +A T  +++    + S+++ A  
Sbjct: 379 DPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHE 438

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LF+ +  K C P  V +NT++ G CK+ R  +A      ML+ G  P + TY+ L+ G C
Sbjct: 439 LFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFC 497

Query: 480 QSKKIDMALKLCCQFLQKGFTPD 502
           ++ +   AL +  + ++ GF P+
Sbjct: 498 RTGRYSDALIMYHEMIEMGFPPE 520



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 241/469 (51%), Gaps = 34/469 (7%)

Query: 165 GVETNVVCY-NILIDGFFKK-----GDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           G+E ++  Y +IL+     K      D   A E+++    ++    N  T N +++   K
Sbjct: 55  GIEKSLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVK 114

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             R ++    +    KN  E D  +Y + ++G  KAG+V+ A  ++ EM +SGI V   +
Sbjct: 115 ARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRS 173

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLRE 338
           +N ++ G C  GKI   +E+++ M      N++SY I+I GL ++ KVD+AI++++ + +
Sbjct: 174 HNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD 233

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           K    D  T+G LI+GL                  G + R+ +A  L       GC    
Sbjct: 234 KAIYPDVVTYGALIDGL------------------GKQRRVKEAYDLFEEARAKGCHPTV 275

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            T N++++G  +  ++ENA+ L+ +M R+    P + +Y+ LINGL    R  +AY   +
Sbjct: 276 VTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYE 335

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF----TPDVTMYNILIHGL 513
           EML+ G  PD++TY+ L++GLC+S   D A+++   F + G      P+V  Y +LI   
Sbjct: 336 EMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI---FRKMGVGNVCDPNVITYTVLIDRF 392

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           C   ++ DA++L   M+ R+ +P+ VT+ T++  L K    D+A E++  I  +  +PD 
Sbjct: 393 CKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDS 451

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + +N  L G C  +R+ DA +  +  L  G  PT  T+  LV      G
Sbjct: 452 VLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTG 500



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 175/357 (49%), Gaps = 31/357 (8%)

Query: 84  GKNSMPDKALDVFQRMNEIFGCE-------AGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           GK SM   A +VF+ M+ IF             LC+ R+ +KA      + +K + PDV 
Sbjct: 185 GKISM---AWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +YG +I+GL K   +  A  +F+E   +G    VV YN +IDG  K G    A  +++ +
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           V E  + P++ TY+ +INGL    R ++  E+++ M       D  TY + + GLCK+G 
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361

Query: 257 VEGAERVYREM-VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-GRKGCLNVVSYN 314
            + A  ++R+M V +    + +TY  +ID FC+  ++ +  +L + M GR    + V++ 
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I+ L +  ++DEA  ++E +  K C  DS     ++ G CK                 
Sbjct: 422 TVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKI---------------- 464

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
              R+ DA  L +RM   GC     T  +L+ GF +  +  +A+ ++ EM   G  P
Sbjct: 465 --TRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 172/335 (51%), Gaps = 12/335 (3%)

Query: 65  EIQKCYCPEDVALSV-IQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQ 115
           ++   + P  ++ ++ I    K+   DKA+ +F++M +         +G     L ++R+
Sbjct: 196 DMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRR 255

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-ERGVETNVVCYN 174
            ++A         KG  P V +Y T+I+GL K G +  AL ++D+M  E  ++ ++  Y+
Sbjct: 256 VKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYS 315

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK- 233
            LI+G        +A E++E + ++T   P+VVTYN +++GLCK G  D+ +E++ +M  
Sbjct: 316 ALINGLNLSNRGEKAYELYEEM-LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
            N  + +  TY   I   CK   +  A ++ +EM    +  DAVT+  +I   C+  +I 
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRID 434

Query: 294 ECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
           E  EL+E +G+    + V +N ++ G  +  ++D+A  + + + +  C     T+  L+ 
Sbjct: 435 EAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVT 494

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           G C+ G  + A+ + +E+ E G       A LV+R
Sbjct: 495 GFCRTGRYSDALIMYHEMIEMGFPPERHLAELVDR 529


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 229/464 (49%), Gaps = 20/464 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R RQ   A  FL  L ++G   + Y +  VI G  + G +  A+ VFD M + G+  +
Sbjct: 256 LSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPD 315

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y+IL+DG  K+GD +   ++   +     + P +V+Y+ +++GLC+ G+ +   E++
Sbjct: 316 THSYSILVDGLCKQGDVLTGYDLLVEMA-RNGIAPTLVSYSSLLHGLCRAGKVELAFELF 374

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            R+++   + D   Y   ++G C+  N+E    ++ +MV      DA  Y ++I  FCR 
Sbjct: 375 RRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRH 434

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             + +   ++E+M   G   NVV+  IL+ G  +   +DEA      +R+     +   +
Sbjct: 435 RNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMY 494

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            V+INGLCK   +NK+  +         G  AD       M K G   +    + +++ F
Sbjct: 495 RVIINGLCK---VNKSDHVW--------GIFAD-------MIKRGYVPDTVVYSIIIDSF 536

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           ++A KL  A  LF +M  +G  P V +Y +LINGLC  +R  E  +  K M+ +G  PD 
Sbjct: 537 VKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDR 596

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           I Y+ LI   C+   +  AL++     + G + D  +Y  LI G      ++ A  L   
Sbjct: 597 ILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEE 656

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           M  +   P++VTY  L+ G FK GD  KA   +N +L+  + PD
Sbjct: 657 MTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 221/458 (48%), Gaps = 28/458 (6%)

Query: 145 LVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLV-MET-SV 202
           LV+   ++ A ++FD+M   G   NV  Y++L+  +   GD +   E +E L  ME   V
Sbjct: 184 LVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAY-THGDRLYLAEAFELLSEMEMKGV 242

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKK-NEREKDSFTYC--SFIHGLCKAGNVEG 259
            PN  TY   + GL    R  +    W+ ++   +R     TYC  + I G C+ G V+ 
Sbjct: 243 KPNAATYGTYLYGL---SRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQE 299

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIR 318
           A  V+  M + G+  D  +Y+ ++DG C+ G +   ++L   M R G    +VSY+ L+ 
Sbjct: 300 AIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLH 359

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL   GKV+ A  ++  L E+    D   + +++NG C+  +LN  +             
Sbjct: 360 GLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQ--HLNIEV------------- 404

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
                 L N M  H    +AY   SL+  F +   L +A+ +F+ M   G SP VV+   
Sbjct: 405 ---VCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           L++G  K     EA+ F+ ++ + G  P++  Y ++INGLC+  K D    +    +++G
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRG 521

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           + PD  +Y+I+I     A K+ +A +L+  M      PN+ TY +L++GL       + +
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVV 581

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
            ++ H++ E L PD I Y   +   C  S M  A E  
Sbjct: 582 TLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF 619



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 233/490 (47%), Gaps = 20/490 (4%)

Query: 118 KAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILI 177
           +A   L+ +  KG+KP+  +YGT + GL ++  +  A      + +RG   N  C+N +I
Sbjct: 229 EAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVI 288

Query: 178 DGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER 237
            GF ++G    A E+++ +  +  + P+  +Y+++++GLCK G      ++   M +N  
Sbjct: 289 QGFCREGQVQEAIEVFDAM-KKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGI 347

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
                +Y S +HGLC+AG VE A  ++R + E G   D + Y+ +++G C+   I+   +
Sbjct: 348 APTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCD 407

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           LW  M     + +  +Y  LI     +  + +A+ ++EL+ +   + +  T  +L++G  
Sbjct: 408 LWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFG 467

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
           K   +++A   L++V +                   G   N      ++NG  + +K ++
Sbjct: 468 KERMIDEAFLFLHKVRQ------------------FGIVPNLCMYRVIINGLCKVNKSDH 509

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
              +F +M ++G  P  V Y+ +I+   K  +  EA+    +ML++G KP++ TY+ LIN
Sbjct: 510 VWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLIN 569

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           GLC   ++   + L    + +G TPD  +Y  LI   C    ++ AL+++  M K     
Sbjct: 570 GLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSA 629

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           +   Y  L+ G  K    D A  +   +  + L P +++Y   + G         A    
Sbjct: 630 DAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTY 689

Query: 597 NDALCRGILP 606
           N  L  GI P
Sbjct: 690 NSMLQAGITP 699



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 244/509 (47%), Gaps = 32/509 (6%)

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           +  FE A   ++SL   G    +  Y T+I   V+      AL  + E  + GVE  +  
Sbjct: 121 RELFELAPMLVSSL--GGSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQLC- 177

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF--DECLEMWD 230
            N L+    ++   + A+ +++ +   +   PNV +Y+V+++      R    E  E+  
Sbjct: 178 -NFLLKCLVERNQIIYARSLFDDM-KSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLS 235

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+    + ++ TY ++++GL +   V  A    + + + G   +   +NA+I GFCR G
Sbjct: 236 EMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREG 295

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT-- 347
           +++E  E+++ M + G + +  SY+IL+ GL + G V   ++ ++LL E   N  + T  
Sbjct: 296 QVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDV---LTGYDLLVEMARNGIAPTLV 352

Query: 348 -HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
            +  L++GLC+ G +  A +                  L  R+++ G K +    + ++N
Sbjct: 353 SYSSLLHGLCRAGKVELAFE------------------LFRRLEEQGFKHDHIVYSIILN 394

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  Q   +E    L+ +M      P   +Y +LI   C+     +A    + ML+ G  P
Sbjct: 395 GCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSP 454

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +++T ++L++G  + + ID A     +  Q G  P++ MY ++I+GLC   K +    ++
Sbjct: 455 NVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIF 514

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           ++M KR  VP+ V Y+ ++D   K     +A  +++ +L+E  +P++ +Y   + GLC  
Sbjct: 515 ADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHD 574

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILV 615
            R+ +        +  G+ P  I +  L+
Sbjct: 575 DRLPEVVTLFKHMIWEGLTPDRILYTSLI 603



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 165/324 (50%), Gaps = 19/324 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG--YLNKAIQILNEV 371
           N L++ L+E  ++  A S+++ ++    + +  ++ VL++        YL +A ++L+E+
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237

Query: 372 EEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           E  G                   ++A A + +  + + G   N Y  N+++ GF +  ++
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           + AI +F  M + G  P   SY+ L++GLCK       Y  + EM   G  P +++YS L
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNC 534
           ++GLC++ K+++A +L  +  ++GF  D  +Y+I+++G C    +E    L+++M   N 
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNF 417

Query: 535 VPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
           VP+   Y +L+    +  +   AL ++  +L+  + P++++  I + G      + +AF 
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477

Query: 595 FLNDALCRGILPTTITWHILVRAV 618
           FL+     GI+P    + +++  +
Sbjct: 478 FLHKVRQFGIVPNLCMYRVIINGL 501



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 8/253 (3%)

Query: 374 GGEGR--LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           G  GR     A  LV+ +      L  Y   +++  F++ S  E+A+  + E  + G   
Sbjct: 117 GSSGRELFELAPMLVSSLGGSMTLLQVYA--TIIRIFVELSMFEDALLTYTEAKKVGVEL 174

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA--LK 489
            +   N L+  L +  +   A S   +M   G  P++ +YS+L++      ++ +A   +
Sbjct: 175 QLC--NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFE 232

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  +   KG  P+   Y   ++GL    +V  A      + +R    N   +N ++ G  
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           + G   +A+E+++ + +  L PD  SY+I + GLC    +   ++ L +    GI PT +
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352

Query: 610 TWHILVRAVMNNG 622
           ++  L+  +   G
Sbjct: 353 SYSSLLHGLCRAG 365



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 1/162 (0%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +  +A R  + + ++G KP+V++Y ++INGL     L   + +F  M   G+  + + Y 
Sbjct: 541 KLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYT 600

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI  + K+ +   A EI+ R + +  +  +   Y  +I G  K    D    + + M  
Sbjct: 601 SLIVCYCKRSNMKAALEIF-RGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTN 659

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
                   TY + I G  K G+   A   Y  M+++GI  DA
Sbjct: 660 KGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 223/451 (49%), Gaps = 21/451 (4%)

Query: 161 MFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCG 220
           + E GV+ +   + +L    F++  +     ++  L     VY    TY ++++GLC  G
Sbjct: 10  VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGET-TYKLVVDGLCGAG 68

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
             ++ LE+  R          F Y   I GLC+A  V  A +V  +MVE  I  +  TY 
Sbjct: 69  MANQALELV-RELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREK 339
            +++G CR+ K K   E+++ M R GC  N ++Y  LI+ L   G++DEA+ +    R  
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDKHG----- 393
               D  T   ++ GLCK   L+ A++ + E+ + G        ++LV+   +HG     
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247

Query: 394 ------------CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                         L A      ++   +A  L+ A    +E+ + G  P VV+Y+ LIN
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
              +  +F  +   +++M   G KPD++TYS LIN LC+ +K   A +L       G  P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           +V  YN ++ GLC +GK+++  ++Y  M K  C P++VTY+ +M+GL K G  D A++++
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDA 592
             I   R  PD  +Y++ +  LC   ++ +A
Sbjct: 428 ELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 261/509 (51%), Gaps = 27/509 (5%)

Query: 100 NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFD 159
           ++ F   A  L R+ +F +  R    L  +G+     +Y  V++GL  +G    AL +  
Sbjct: 19  SQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVR 78

Query: 160 EMFERGVET-NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           E+   GV T  +  YN +I G  +    M A ++ E++V E S+ PNV TY +++NGLC+
Sbjct: 79  EL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMV-EESIVPNVFTYTILLNGLCR 135

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
             +     E++  MK+N  + +  TY + I  L +AG ++ A RV  E     +  D +T
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 279 YNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLR 337
              ++ G C+A ++ +  +  E M + G   N V+Y+ L+ G  ++G++D  I  +E  +
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 338 -EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKL 396
             K  + ++  +   ++ LCK GYL++A + + E+ + G                     
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG------------------VVP 297

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           +  T + L+N F +A + + ++ L ++M R G  P VV+Y+TLIN LCK  +F +A+  +
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           + M   G  P+++TY+ +++GLC+S K+D   ++    L+   +PDV  Y+I+++GL  A
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISY 576
           G ++ A++L+  +K     P+   Y+ ++  L + G  ++A  ++ H +E  +  D I  
Sbjct: 418 GMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY-HGMEVTVAGDNICR 476

Query: 577 NIT--LKGLCSCSRMSDAFEFLNDALCRG 603
            +   +  LC   R   A   +  A  RG
Sbjct: 477 ALAGLVAALCDAERTDSARRIVEVASERG 505



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 221/434 (50%), Gaps = 25/434 (5%)

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A ++ ER V+E  V  +   + ++   L +  +F E + ++  +          TY   +
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELWEVMGRKGC 307
            GLC AG    A  + RE+  SG++   +  YN +I G CRA ++ + +++ E M  +  
Sbjct: 62  DGLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 308 L-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ 366
           + NV +Y IL+ GL  + K   A  +++ ++   C  +  T+G LI  L + G +++A++
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 367 ILNEVEE--------------GG---EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           ++ E                 GG     RL DA   +  M + G + N  T ++L++GF 
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 410 QASKLENAIFLF-KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
           Q  +L+  I  F +E +RKG S    +Y   ++ LCK      A   V+E+ + G  PD+
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TYS+LIN   ++ + D +L+L     + G  PDV  Y+ LI+ LC   K +DA +L   
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL 359

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M+     PN+VTYN++MDGL K+G  D+   ++  +L+ R  PD+++Y+I + GL     
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419

Query: 589 MSDA---FEFLNDA 599
           +  A   FE +  +
Sbjct: 420 LDSAVKLFELIKSS 433



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 175/362 (48%), Gaps = 19/362 (5%)

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLL 321
           R++  +   G+     TY  ++DG C AG   +  EL   +       +  YN +I GL 
Sbjct: 40  RLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPTLFIYNGIITGLC 99

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
              +V +A  + E + E++   +  T+ +L+NGLC++     A ++  E           
Sbjct: 100 RASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQE----------- 148

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  M ++GCK N  T  +L+    +A +++ A+ +  E         V++  T++ 
Sbjct: 149 -------MKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVG 201

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ-FLQKGFT 500
           GLCK  R  +A  F++EM + G +P+ +TYS L++G  Q  ++D  ++   +   +KG +
Sbjct: 202 GLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGS 261

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            +   Y   +  LC AG ++ A +    +++   VP++VTY+ L++   + G  D +LE+
Sbjct: 262 LEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLEL 321

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              +    ++PD+++Y+  +  LC   +  DAF  L      G  P  +T++ ++  +  
Sbjct: 322 LEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCK 381

Query: 621 NG 622
           +G
Sbjct: 382 SG 383



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 2/242 (0%)

Query: 382 AASLVNR-MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           AA L+ R + + G K+++     L     + SK    + LF  ++ +G      +Y  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +GLC      +A   V+E L   + P +  Y+ +I GLC++ ++  A K+  + +++   
Sbjct: 62  DGLCGAGMANQALELVRE-LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V  Y IL++GLC + K + A +++  MK+  C PN +TY TL+  L + G+ D+AL +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
                   L  D+I+    + GLC  SR+ DA +F+ +    G+ P  +T+  LV     
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 621 NG 622
           +G
Sbjct: 241 HG 242


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 276/573 (48%), Gaps = 40/573 (6%)

Query: 80   IQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGL 131
            I  YGK+     AL+ F++M        I  C A +  L +  +  +AK+    L + GL
Sbjct: 442  IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 501

Query: 132  KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             PD  +Y  ++    K G++  A+ +  EM E   E +V+  N LI+  +K     R  E
Sbjct: 502  VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD---RVDE 558

Query: 192  IWERLVM--ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             W+  +   E  + P VVTYN ++ GL K G+  E +E+++ M +     ++ T+ +   
Sbjct: 559  AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 618

Query: 250  GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLN 309
             LCK   V  A ++  +M++ G   D  TYN +I G  + G++KE    +  M +    +
Sbjct: 619  CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 678

Query: 310  VVSYNILIRGLLENGKVDEAISI----------------WE-----LLREKNC-NADSTT 347
             V+   L+ G+++ G +++A  I                WE     +L E    NA S +
Sbjct: 679  FVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFS 738

Query: 348  HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH-GCKLNAYTCNSLMN 406
              ++ NG+C++G    +I +            + A  L  +  K  G +    T N L+ 
Sbjct: 739  ERLVANGICRDG---DSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIG 795

Query: 407  GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            G ++A  +E A  +F ++   GC P V +YN L++   K  +  E +   KEM     +P
Sbjct: 796  GLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEP 855

Query: 467  DMITYSLLINGLCQSKKIDMALKLCCQFLQ-KGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            + IT++++I+GL ++  +D AL L    +  + F+P    Y  LI GL  +G++ +A QL
Sbjct: 856  NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 915

Query: 526  YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
            +  M    C PN   YN L++G  K G+ D A  ++  +++E +RPD+ +Y++ +  LC 
Sbjct: 916  FEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 975

Query: 586  CSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
              R+ +   +  +    G+ P  + +++++  +
Sbjct: 976  VGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 40/554 (7%)

Query: 78   SVIQAYGKNSMPDKALDVFQRM------------NEIFGCEAGILCRKRQFEKAKRFLNS 125
            +++   GKN    +A+++F+ M            N +F C    LC+  +   A + L  
Sbjct: 580  TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC----LCKNDEVTLALKMLFK 635

Query: 126  LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
            + + G  PDV++Y T+I GLVK+G +  A+  F +M ++ V  + V    L+ G  K G 
Sbjct: 636  MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGL 694

Query: 186  YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNE--REKDSFT 243
               A +I    +   +  P  + +  ++  +      D  +   +R+  N   R+ DS  
Sbjct: 695  IEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSI- 753

Query: 244  YCSFIHGLCKAGNVEGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
                I    K  N  GA  ++ +  +  G+     TYN +I G   A  I+   +++  +
Sbjct: 754  LVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 813

Query: 303  GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
               GC+ +V +YN L+    ++GK+DE   I++ +    C  ++ TH ++I+GL K G +
Sbjct: 814  KNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNV 873

Query: 362  NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
            + A+ +  ++                 M        A T   L++G  ++ +L  A  LF
Sbjct: 874  DDALDLYYDL-----------------MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 916

Query: 422  KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            + MS  GC P    YN LING  K      A +  K M+++G +PD+ TYS+L++ LC  
Sbjct: 917  EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 976

Query: 482  KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK-RNCVPNLVT 540
             ++D  L    +  + G  PDV  YN++I+GL    ++E+AL L++ MKK R   P+L T
Sbjct: 977  GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYT 1036

Query: 541  YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
            YN+L+  L   G  ++A +I+N I    L P++ ++N  ++G     +   A+      +
Sbjct: 1037 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096

Query: 601  CRGILPTTITWHIL 614
              G  P T T+  L
Sbjct: 1097 TGGFSPNTGTYEQL 1110



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 289/602 (48%), Gaps = 72/602 (11%)

Query: 72   PEDVALSVI-QAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRF 122
            P+ V  +++ + Y K    D+A+ +   M E        +       L +  + ++A + 
Sbjct: 503  PDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKM 562

Query: 123  LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
               + E  LKP V +Y T++ GL K+G +  A+ +F+ M ++G   N + +N L D   K
Sbjct: 563  FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622

Query: 183  KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
              +   A ++  ++ M+    P+V TYN +I GL K G+  E +  + +MKK     D  
Sbjct: 623  NDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFV 680

Query: 243  TYCSFIHGLCKAGNVEGAERVYRE---------------------MVESGIFVDAVTYNA 281
            T C+ + G+ KAG +E A ++                        + E+GI  +AV+++ 
Sbjct: 681  TLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGI-DNAVSFSE 739

Query: 282  MI--DGFCRAGK------IKECFELWEVMGRKGCL-----------NVVSYNILIRGLLE 322
             +  +G CR G       I+  F+     G +               + +YN+LI GLLE
Sbjct: 740  RLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLE 799

Query: 323  NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
               ++ A  ++  ++   C  D  T+  L++   K+G +++  +I  E            
Sbjct: 800  ADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKE------------ 847

Query: 383  ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE-MSRKGCSPTVVSYNTLIN 441
                  M  H C+ N  T N +++G ++A  +++A+ L+ + MS +  SPT  +Y  LI+
Sbjct: 848  ------MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901

Query: 442  GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            GL K  R  EA    + M + G +P+   Y++LING  ++ + D A  L  + +++G  P
Sbjct: 902  GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961

Query: 502  DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
            D+  Y++L+  LC  G+V++ L  +  +K+    P++V YN +++GL K    ++AL ++
Sbjct: 962  DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLF 1021

Query: 562  NHILEER-LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            N + + R + PD+ +YN  +  L     + +A +  N+    G+ P   T++ L+R    
Sbjct: 1022 NEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1081

Query: 621  NG 622
            +G
Sbjct: 1082 SG 1083



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 251/523 (47%), Gaps = 26/523 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           IF C    L  K    +A   L  + E G   + YSY  +I+ L+KS     A+ V+  M
Sbjct: 161 IFKC----LSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 216

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET-SVYPNVVTYNVMINGLCKCG 220
              G   ++  Y+ L+ G  K+ D      + +   MET  + PNV T+ + I  L + G
Sbjct: 217 ILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKE--METLGLKPNVYTFTICIRVLGRAG 274

Query: 221 RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYN 280
           + +E  E+  RM       D  TY   I  LC A  ++ A+ V+ +M       D VTY 
Sbjct: 275 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYI 334

Query: 281 AMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
            ++D F     +    + W  M + G + +VV++ IL+  L + G   EA +  +++R++
Sbjct: 335 TLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQ 394

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               +  T+  LI GL +                    RL DA  + + M+  G K  AY
Sbjct: 395 GILPNLHTYNTLICGLLR------------------VHRLDDALEIFDNMESLGVKPTAY 436

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T    ++ + ++    +A+  F++M  KG +P +V+ N  +  L K  R  EA      +
Sbjct: 437 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 496

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKV 519
            + G  PD +TY++++    +  +ID A+KL  + ++    PDV + N LI+ L  A +V
Sbjct: 497 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556

Query: 520 EDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           ++A +++  MK+    P +VTYNTL+ GL K G   +A+E++  ++++   P+ I++N  
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              LC    ++ A + L   +  G +P   T++ ++  ++ NG
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 659



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 270/608 (44%), Gaps = 68/608 (11%)

Query: 80  IQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG 130
           I+  G+    ++A ++ +RM++  GC   +         LC  R+ + AK     +    
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGR 325

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
            KPD  +Y T+++    + DL      + EM + G   +VV + IL+D   K G++  A 
Sbjct: 326 HKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
              + ++ +  + PN+ TYN +I GL +  R D+ LE++D M+    +  ++TY  FI  
Sbjct: 386 AKLD-VMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDY 444

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
             K+G+   A   + +M   GI  + V  NA +    +AG+ +E  +++  +   G + +
Sbjct: 445 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 504

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN++++   + G++DEAI +   + E  C  D      LIN L K   +++A ++  
Sbjct: 505 SVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFM 564

Query: 370 EVEE-----------------GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            ++E                 G  G++ +A  L   M + GC  N  T N+L +   +  
Sbjct: 565 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 624

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           ++  A+ +  +M   GC P V +YNT+I GL K  +  EA  F  +M +K   PD +T  
Sbjct: 625 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLC 683

Query: 473 LLINGLCQSKKIDMALKLCCQFL---------------------QKGFTPDVTMYNILI- 510
            L+ G+ ++  I+ A K+   FL                     + G    V+    L+ 
Sbjct: 684 TLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVA 743

Query: 511 HGLCSAG---------------KVEDALQLYSNMKKRNCV-PNLVTYNTLMDGLFKTGDC 554
           +G+C  G                   A  L+    K   V P L TYN L+ GL +    
Sbjct: 744 NGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 803

Query: 555 DKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           + A +++  +      PD+ +YN  L       ++ + FE   +       P TIT +I+
Sbjct: 804 EIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIV 863

Query: 615 VRAVMNNG 622
           +  ++  G
Sbjct: 864 ISGLVKAG 871



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 234/513 (45%), Gaps = 22/513 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + E+     + + ++ +K D  +Y T+   L   G L  A     +M E G   N   YN
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYN 194

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI    K      A E++ R++++    P++ TY+ ++ GL K    +  + +   M+ 
Sbjct: 195 GLIHLLLKSRFCTEAMEVYRRMILD-GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET 253

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + + +T+   I  L +AG +  A  + + M + G   D VTY  +ID  C A K+  
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 313

Query: 295 CFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
             E++  M  GR    + V+Y  L+    +N  +D     W  + +     D  T  +L+
Sbjct: 314 AKEVFAKMKTGRHKP-DRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           + LCK                   G   +A + ++ M   G   N +T N+L+ G ++  
Sbjct: 373 DALCK------------------AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVH 414

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           +L++A+ +F  M   G  PT  +Y   I+   K      A    ++M  KG  P+++  +
Sbjct: 415 RLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 474

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
             +  L ++ +   A ++       G  PD   YN+++      G++++A++L S M + 
Sbjct: 475 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVEN 534

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            C P+++  N+L++ L+K    D+A +++  + E +L+P +++YN  L GL    ++ +A
Sbjct: 535 CCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 594

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            E     + +G  P TIT++ L   +  N   T
Sbjct: 595 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 627



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 38/388 (9%)

Query: 126  LWEKGLKPDV-YSYGTVINGLVKSGDLL---------------GALAVFDEMF-ERGVET 168
            L E G+   V +S   V NG+ + GD +               GA  +F++   + GV+ 
Sbjct: 726  LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQP 785

Query: 169  NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
             +  YN+LI G  +      A++++ + V  T   P+V TYN +++   K G+ DE  E+
Sbjct: 786  KLPTYNLLIGGLLEADMIEIAQDVFLQ-VKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844

Query: 229  WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD-AVTYNAMIDGFC 287
            +  M  +E E ++ T+   I GL KAGNV+ A  +Y +++    F   A TY  +IDG  
Sbjct: 845  YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904

Query: 288  RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
            ++G++ E  +L+E M   GC  N   YNILI G  + G+ D A ++++ + ++    D  
Sbjct: 905  KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 964

Query: 347  THGVLINGLCKNGYLNKAIQILNEVEEGGEG-----------------RLADAASLVNRM 389
            T+ VL++ LC  G +++ +    E++E G                   RL +A  L N M
Sbjct: 965  TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024

Query: 390  DK-HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
             K  G   + YT NSL+     A  +E A  ++ E+ R G  P V ++N LI G     +
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084

Query: 449  FGEAYSFVKEMLEKGWKPDMITYSLLIN 476
               AY+  + M+  G+ P+  TY  L N
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 207/468 (44%), Gaps = 53/468 (11%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           T N M+  L   G+ +E   ++D M+K   ++D+ TY +    L   G +  A    R+M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM-------------------GRK--- 305
            E G  ++A +YN +I    ++    E  E++  M                   G++   
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 306 ----GCL----------NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
               G L          NV ++ I IR L   GK++EA  I + + ++ C  D  T+ VL
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 352 INGLCKNGYLNKAIQILNEVEEGGE-----------GRLADAASL--VNR----MDKHGC 394
           I+ LC    L+ A ++  +++ G              R +D   L  VN+    M+K G 
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             +  T   L++   +A     A      M  +G  P + +YNTLI GL +V R  +A  
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M   G KP   TY + I+   +S     AL+   +   KG  P++   N  ++ L 
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 481

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
            AG+  +A Q++  +K    VP+ VTYN +M    K G+ D+A+++ + ++E    PD+I
Sbjct: 482 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVI 541

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             N  +  L    R+ +A++         + PT +T++ L+  +  NG
Sbjct: 542 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 589



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 17/328 (5%)

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N ++  L  +GK++E   +++L++++    D+ T+  +   L   G L +A   L ++ E
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183

Query: 374 GG----------------EGRL-ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
            G                + R   +A  +  RM   G + +  T +SLM G  +   +E+
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
            + L KEM   G  P V ++   I  L +  +  EAY  +K M ++G  PD++TY++LI+
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
            LC ++K+D A ++  +       PD   Y  L+        ++   Q +S M+K   VP
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP 363

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           ++VT+  L+D L K G+  +A    + + ++ + P++ +YN  + GL    R+ DA E  
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423

Query: 597 NDALCRGILPTTITWHILVRAVMNNGAS 624
           ++    G+ PT  T+ + +     +G S
Sbjct: 424 DNMESLGVKPTAYTYIVFIDYYGKSGDS 451


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 169/607 (27%), Positives = 278/607 (45%), Gaps = 67/607 (11%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++A  +   P +AL+V  R  E        ++       C+      A   L  + EK 
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298

Query: 131 L-KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           L  P   +Y +VI   VK G++  A+ + DEM   G+  NVV    LI G  K  D + A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             +++++  E    PN VT++V+I    K G  ++ LE + +M+        F   + I 
Sbjct: 359 LVLFDKMEKEGP-SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           G  K    E A +++ E  E+G+  +    N ++   C+ GK  E  EL   M  +G   
Sbjct: 418 GWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NVVSYN ++ G      +D A  ++  + EK    ++ T+ +LI+G  +N     A++++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536

Query: 369 NE-----VEEGGE------------GRLADAASLVNRM--DKHGCKLNAYTCNSLMNGFI 409
           N      +E  G             G+ + A  L+  M  +K  C ++  + NS+++GF 
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGFF 595

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++++A+  ++EM   G SP V++Y +L+NGLCK  R  +A     EM  KG K D+ 
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y  LI+G C+   ++ A  L  + L++G  P   +YN LI G  + G +  AL LY  M
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR- 588
            K     +L TY TL+DGL K G+   A E++  +    L PD I Y + + GL    + 
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775

Query: 589 ----------------------------------MSDAFEFLNDALCRGILPTTITWHIL 614
                                             + +AF   ++ L +GILP   T+ IL
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835

Query: 615 VRAVMNN 621
           V   + N
Sbjct: 836 VSGQVGN 842



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/607 (23%), Positives = 270/607 (44%), Gaps = 65/607 (10%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           ++ AY K+   D A+D+  +M E+               L ++    +AK   + +   G
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           +  D  +   ++   ++      AL V     ERG E + + Y++ +    K  D   A 
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMAN 288

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +   +  +    P+  TY  +I    K G  D+ + + D M  +    +     S I G
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
            CK  ++  A  ++ +M + G   ++VT++ +I+ F + G++++  E ++ M   G   +
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V   + +I+G L+  K +EA+ +++   E    A+      +++ LCK G  ++A ++L+
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLS 467

Query: 370 EVEEGGEG----------------RLADAASLV--NRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++E  G G                +  D A +V  N ++K G K N YT + L++G  + 
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYSILIDGCFRN 526

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK--------- 462
              +NA+ +   M+        V Y T+INGLCKV +  +A   +  M+E+         
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586

Query: 463 ---------------------------GWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                                      G  P++ITY+ L+NGLC++ ++D AL++  +  
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG   D+  Y  LI G C    +E A  L+S + +    P+   YN+L+ G    G+  
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            AL+++  +L++ LR D+ +Y   + GL     +  A E   +    G++P  I + ++V
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766

Query: 616 RAVMNNG 622
             +   G
Sbjct: 767 NGLSKKG 773



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 240/505 (47%), Gaps = 24/505 (4%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           + ++S    G + +  ++  ++N   K      A+ + ++M E  V       N  +   
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            ++     AKE++ R+V    V  + VT  +++    +  +  E LE+  R  +   E D
Sbjct: 209 VQRNSLTEAKELYSRMVA-IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGFCRAGKIKECFELW 299
           S  Y   +   CK  ++  A  + REM E  + V +  TY ++I    + G + +   L 
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK 327

Query: 300 EVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           + M   G  +NVV+   LI G  +N  +  A+ +++ + ++  + +S T  VLI    KN
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387

Query: 359 GYLNKAIQILNEVEEGG------------EGRLA-----DAASLVNRMDKHGCKLNAYTC 401
           G + KA++   ++E  G            +G L      +A  L +   + G   N + C
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVC 446

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           N++++   +  K + A  L  +M  +G  P VVSYN ++ G C+ +    A      +LE
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG KP+  TYS+LI+G  ++     AL++           +  +Y  +I+GLC  G+   
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566

Query: 522 ALQLYSNM--KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNIT 579
           A +L +NM  +KR CV + ++YN+++DG FK G+ D A+  +  +    + P++I+Y   
Sbjct: 567 ARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625

Query: 580 LKGLCSCSRMSDAFEFLNDALCRGI 604
           + GLC  +RM  A E  ++   +G+
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGV 650



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 20/407 (4%)

Query: 238 EKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE 297
           E +S  +   ++   K    + A  +  +M+E  +       N  +    +   + E  E
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           L+  M   G   + V+  +L+R  L   K  EA+ +     E+    DS  + + +   C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279

Query: 357 KNGYLNKAIQILNEVEEGG------------------EGRLADAASLVNRMDKHGCKLNA 398
           K   L  A  +L E++E                    +G + DA  L + M   G  +N 
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
               SL+ G  + + L +A+ LF +M ++G SP  V+++ LI    K     +A  F K+
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399

Query: 459 MLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGK 518
           M   G  P +     +I G  + +K + ALKL  +  + G   +V + N ++  LC  GK
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGK 458

Query: 519 VEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
            ++A +L S M+ R   PN+V+YN +M G  +  + D A  ++++ILE+ L+P+  +Y+I
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
            + G        +A E +N      I    + +  ++  +   G ++
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           + LV+     G ++N+   N L+N + +  + ++A+ +  +M      P     N  ++ 
Sbjct: 148 SKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSA 207

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           L +     EA      M+  G   D +T  LL+    + +K   AL++  + +++G  PD
Sbjct: 208 LVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMK-KRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
             +Y++ +   C    +  A  L   MK K+ CVP+  TY +++    K G+ D A+ + 
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK 327

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNN 621
           + +L + +  ++++    + G C  + +  A    +     G  P ++T+ +L+     N
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387

Query: 622 G 622
           G
Sbjct: 388 G 388


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 219/427 (51%), Gaps = 19/427 (4%)

Query: 197  VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
            ++++   P++V +  ++  + K  +FD  + ++ +M+      D +++   IH  C+   
Sbjct: 595  MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 654

Query: 257  VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
            +  A  +  +M++ G     VT  ++++GFC+  + +E   L + M   G + NVV YN 
Sbjct: 655  LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 714

Query: 316  LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
            +I GL +N  ++ A+ ++  + +K   AD+ T+  LI+GL                    
Sbjct: 715  VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL------------------SN 756

Query: 376  EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
             GR  DAA L+  M K     N     +L++ F++   L  A  L+KEM R+   P V +
Sbjct: 757  SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 816

Query: 436  YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
            YN+LING C     G+A      M+ KG  PD++TY+ LI G C+SK+++  +KL C+  
Sbjct: 817  YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 876

Query: 496  QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             +G   D   YN LIHG C AGK+  A ++++ M      P++VTYN L+D L   G  +
Sbjct: 877  YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 936

Query: 556  KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            KAL +   + +  +  DII+YNI ++GLC   ++ +A+        +G+ P  I +  ++
Sbjct: 937  KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 996

Query: 616  RAVMNNG 622
              +   G
Sbjct: 997  SGLCRKG 1003



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 225/464 (48%), Gaps = 20/464 (4%)

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
            G + S     A A+F EM       ++V +  L+        Y       +++ +   +
Sbjct: 44  TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL-YGI 102

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
             ++ ++ ++I+  C+C R    L +  +M K   E    T+ S +HG C    +  A  
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLL 321
           +   MV+SG   + V YN +IDG C+ G++    EL   M +KG   +VV+YN L+ GL 
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 322 ENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLAD 381
            +G+  +A  +   + +++ N D  T   LI+   K G L++A ++  E           
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE----------- 271

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                  M +     N  T NS++NG     +L +A   F  M+ KGC P VV+YNTLI+
Sbjct: 272 -------MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G CK     E     + M  +G+  D+ TY+ LI+G CQ  K+ +AL + C  + +  TP
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D+  + IL+HGLC  G++E AL  + +M++      +V YN ++ GL K    +KA E++
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
             +  E ++PD  +Y I + GLC      +A E +      GI+
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 211/420 (50%), Gaps = 19/420 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++V +  ++       R++  +    +M+      D +++   IH  C+   +  A  V
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
             +M++ G     VT+ +++ GFC   +I + F L  +M + G   NVV YN LI GL +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           NG+++ A+ +   + +K   AD  T+  L+ GLC +G                  R +DA
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG------------------RWSDA 230

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
           A ++  M K     +  T  +L++ F++   L+ A  L+KEM +    P  V+YN++ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC   R  +A      M  KG  P+++TY+ LI+G C+ + +D  +KL  +   +GF  D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
           +  YN LIHG C  GK+  AL ++  M  R   P+++T+  L+ GL   G+ + AL  ++
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + E      I++YNI + GLC   ++  A+E        G+ P   T+ I++  +  NG
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 266/547 (48%), Gaps = 41/547 (7%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +  ++   ++A+     + +  + P+  +Y ++INGL   G L  A   FD M  +G   
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEM 228
           NVV YN LI GF K        ++++R+  E     ++ TYN +I+G C+ G+    L++
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDI 373

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           +  M       D  T+C  +HGLC  G +E A   + +M ES  ++  V YN MI G C+
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKN--CNADS 345
           A K+++ +EL+  +  +G   +  +Y I+I GL +NG   EA  +   ++E+   C  ++
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493

Query: 346 TTHGVLINGLCKNGYLNKAIQI-LNEVEEGGEGR---------LADAASLVNRMDKHGCK 395
                  + L ++   NK I + L E+ E  +           +A ++S+   + +H   
Sbjct: 494 ED-----DHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLL 548

Query: 396 L----NAYTCNSLMNGFIQAS----------------KLENAIFLFKEMSRKGCSPTVVS 435
           L    N  T  SL   F  AS                K ++A  LF EM +    P++V 
Sbjct: 549 LERGNNPET--SLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD 606

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           +  ++  + K+ +F        +M   G   D+ ++++LI+  C+  ++ +AL L  + +
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + GF P +     L++G C   + ++A+ L  +M     VPN+V YNT+++GL K  D +
Sbjct: 667 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 726

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            ALE++  + ++ +R D ++YN  + GL +  R +DA   L D + R I P  I +  L+
Sbjct: 727 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786

Query: 616 RAVMNNG 622
              +  G
Sbjct: 787 DTFVKEG 793



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 241/484 (49%), Gaps = 41/484 (8%)

Query: 114 RQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
           R++E    F   +   G+  D+YS+  +I+   +   L  AL+V  +M + G E ++V +
Sbjct: 85  RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144

Query: 174 NILIDGFF---KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             L+ GF    + GD          L++++   PNVV YN +I+GLCK G  +  LE+ +
Sbjct: 145 GSLLHGFCLVNRIGDAFS----LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M+K     D  TY + + GLC +G    A R+ R+M++  I  D VT+ A+ID F + G
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            + E  EL++ M +     N V+YN +I GL  +G++ +A   ++L+  K C  +  T+ 
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+G CK             V+EG          L  RM   G   + +T N+L++G+ 
Sbjct: 321 TLISGFCK----------FRMVDEG--------MKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           Q  KL  A+ +F  M  +  +P ++++  L++GLC       A     +M E      ++
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+++I+GLC++ K++ A +L C+   +G  PD   Y I+I GLC  G   +A +L   M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKAL-----EIW-----NHILEERLRPDIISYNIT 579
           K+   +  +   N   D L +    +K +     EIW     N    +RL P  I+++ +
Sbjct: 483 KEEGIICQM---NAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIP--IAFSSS 537

Query: 580 LKGL 583
           +KG 
Sbjct: 538 VKGF 541



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 263/545 (48%), Gaps = 33/545 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   ++  A R L  + ++ + PDV ++  +I+  VK G+L  A  ++ EM +  V+ N
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN +I+G    G    AK+ ++ L+     +PNVVTYN +I+G CK    DE ++++
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFD-LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RM       D FTY + IHG C+ G +  A  ++  MV   +  D +T+  ++ G C  
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 290 GKIKECFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I+     ++ M   +  + +V+YNI+I GL +  KV++A  ++  L  +    D+ T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC-------------- 394
            ++I GLCKNG   +A +++  ++E  EG +    +  + +++H                
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKE--EGIICQMNAEDDHLEEHSSSNKEISLSLREIWE 517

Query: 395 ----------KLNAYTCNSLMNGFIQASKL--ENAIFLFKEMSRK--GCSPTVVSYNTLI 440
                     +L     +S + GF++   L  E        +SR   G S        L 
Sbjct: 518 RSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR 577

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           N L  + +F +A+S   EML+    P ++ ++ ++  + +  K D+ + L  +    G +
Sbjct: 578 NELHCI-KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS 636

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D+  + ILIH  C   ++  AL L   M K    P++VT  +L++G  +     +A+ +
Sbjct: 637 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 696

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            + +      P+++ YN  + GLC    +++A E       +GI    +T++ L+  + N
Sbjct: 697 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 756

Query: 621 NGAST 625
           +G  T
Sbjct: 757 SGRWT 761



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 230/468 (49%), Gaps = 20/468 (4%)

Query: 115  QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
            +F+ A      + +    P +  +  V+  + K       + ++ +M   G+  ++  + 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 175  ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            ILI  F +      A  +  ++ M+    P++VT   ++NG C+  RF E + + D M  
Sbjct: 644  ILIHCFCRCSRLSLALALLGKM-MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 235  NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                 +   Y + I+GLCK  ++  A  V+  M + GI  DAVTYN +I G   +G+  +
Sbjct: 703  FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 295  CFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
               L  +++ RK   NV+ +  LI   ++ G + EA ++++ +  ++   +  T+  LIN
Sbjct: 763  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 354  GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            G C +G L                   DA  + + M   GC  +  T N+L+ GF ++ +
Sbjct: 823  GFCIHGCL------------------GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864

Query: 414  LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
            +E+ + LF EM+ +G      +YNTLI+G C+  +   A      M++ G  PD++TY++
Sbjct: 865  VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924

Query: 474  LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
            L++ LC + KI+ AL +     +     D+  YNI+I GLC   K+++A  L+ ++ ++ 
Sbjct: 925  LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984

Query: 534  CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
              P+ + Y T++ GL + G   +A ++   + E+   P    Y+ TL+
Sbjct: 985  VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 195/373 (52%), Gaps = 20/373 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            CR  +   A   L  + + G +P + ++G++++G      +  A ++   M + G E N
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN LIDG  K G+   A E+   +  +  +  +VVTYN ++ GLC  GR+ +   M 
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M K     D  T+ + I    K GN++ A+ +Y+EM++S +  + VTYN++I+G C  
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +  + +++M  KGC  NVV+YN LI G  +   VDE + +++ +  +  NAD  T+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G C+ G L  A+ I                 +V+R        +  T   L++G 
Sbjct: 355 NTLIHGYCQVGKLRVALDIF--------------CWMVSRR----VTPDIITHCILLHGL 396

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++E+A+  F +M        +V+YN +I+GLCK ++  +A+     +  +G KPD 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 469 ITYSLLINGLCQS 481
            TY+++I GLC++
Sbjct: 457 RTYTIMILGLCKN 469



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%), Gaps = 20/363 (5%)

Query: 110  LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
             C+  +F++A   ++S+   G  P+V  Y TVINGL K+ DL  AL VF  M ++G+  +
Sbjct: 684  FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 743

Query: 170  VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
             V YN LI G    G +  A  +   +V +  + PNV+ +  +I+   K G   E   ++
Sbjct: 744  AVTYNTLISGLSNSGRWTDAARLLRDMV-KRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802

Query: 230  DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
              M +     + FTY S I+G C  G +  A+ ++  MV  G F D VTYN +I GFC++
Sbjct: 803  KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862

Query: 290  GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             ++++  +L+  M  +G + +  +YN LI G  + GK++ A  ++  + +   + D  T+
Sbjct: 863  KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 922

Query: 349  GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +L++ LC NG + KA+ ++ ++++             + MD     ++  T N ++ G 
Sbjct: 923  NILLDCLCNNGKIEKALVMVEDLQK-------------SEMD-----VDIITYNIIIQGL 964

Query: 409  IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             +  KL+ A  LF+ ++RKG  P  ++Y T+I+GLC+     EA    + M E G+ P  
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 469  ITY 471
              Y
Sbjct: 1025 RIY 1027



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 155/673 (23%), Positives = 287/673 (42%), Gaps = 107/673 (15%)

Query: 4   SAKRLLNLLKAEKNPH--TALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVS--- 58
           +A+ L +++K   NP   T  AL D   ++     +  L+  +++  +DP  V + S   
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289

Query: 59  ------------RILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCE 106
                       +  +L+  + C+       ++I  + K  M D+ + +FQRM+    CE
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS----CE 345

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
                                  G   D+++Y T+I+G  + G L  AL +F  M  R V
Sbjct: 346 -----------------------GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             +++ + IL+ G    G+   A   ++ +  E+  Y  +V YN+MI+GLCK  + ++  
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDM-RESEKYIGIVAYNIMIHGLCKADKVEKAW 441

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           E++ R+     + D+ TY   I GLCK G    A+ + R M E GI       +  ++  
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501

Query: 287 CRAGK--IKECFELWEV-------MGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
             + K       E+WE        M R   L  ++++  ++G +             LL 
Sbjct: 502 SSSNKEISLSLREIWERSKSNPFWMQR---LIPIAFSSSVKGFVRR---------HYLLL 549

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
           E+  N +++           + Y  +    L+ +      +  DA SL   M +     +
Sbjct: 550 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCI------KFDDAFSLFCEMLQSRPIPS 603

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI----------------- 440
                 ++    + +K +  I+L+ +M   G S  + S+  LI                 
Sbjct: 604 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 663

Query: 441 ------------------NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
                             NG C+  RF EA S V  M   G+ P+++ Y+ +INGLC+++
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            ++ AL++     +KG   D   YN LI GL ++G+  DA +L  +M KR   PN++ + 
Sbjct: 724 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 783

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+D   K G+  +A  ++  ++   + P++ +YN  + G C    + DA    +  + +
Sbjct: 784 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843

Query: 603 GILPTTITWHILV 615
           G  P  +T++ L+
Sbjct: 844 GCFPDVVTYNTLI 856



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L  GF+ + + E+A  LF EM      P++V +  L+     + R+     F ++M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D+ ++++LI+  C+  ++  AL +  + ++ G+ P +  +  L+HG C   ++ DA 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            L   M K    PN+V YNTL+DGL K G+ + ALE+ N + ++ L  D+++YN  L GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C   R SDA   L D + R I P  +T+  L+   +  G
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 219/427 (51%), Gaps = 19/427 (4%)

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           ++++   P++V +  ++  + K  +FD  + ++ +M+      D +++   IH  C+   
Sbjct: 70  MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 129

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           +  A  +  +M++ G     VT  ++++GFC+  + +E   L + M   G + NVV YN 
Sbjct: 130 LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I GL +N  ++ A+ ++  + +K   AD+ T+  LI+GL                    
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL------------------SN 231

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
            GR  DAA L+  M K     N     +L++ F++   L  A  L+KEM R+   P V +
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN+LING C     G+A      M+ KG  PD++TY+ LI G C+SK+++  +KL C+  
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +G   D   YN LIHG C AGK+  A ++++ M      P++VTYN L+D L   G  +
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KAL +   + +  +  DII+YNI ++GLC   ++ +A+        +G+ P  I +  ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471

Query: 616 RAVMNNG 622
             +   G
Sbjct: 472 SGLCRKG 478



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 230/468 (49%), Gaps = 20/468 (4%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           +F+ A      + +    P +  +  V+  + K       + ++ +M   G+  ++  + 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           ILI  F +      A  +  ++ M+    P++VT   ++NG C+  RF E + + D M  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKM-MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +   Y + I+GLCK  ++  A  V+  M + GI  DAVTYN +I G   +G+  +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 295 CFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
              L  +++ RK   NV+ +  LI   ++ G + EA ++++ +  ++   +  T+  LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G C +G L                   DA  + + M   GC  +  T N+L+ GF ++ +
Sbjct: 298 GFCIHGCL------------------GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E+ + LF EM+ +G      +YNTLI+G C+  +   A      M++ G  PD++TY++
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRN 533
           L++ LC + KI+ AL +     +     D+  YNI+I GLC   K+++A  L+ ++ ++ 
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459

Query: 534 CVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
             P+ + Y T++ GL + G   +A ++   + E+   P    Y+ TL+
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%), Gaps = 20/363 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C+  +F++A   ++S+   G  P+V  Y TVINGL K+ DL  AL VF  M ++G+  +
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN LI G    G +  A  +   +V +  + PNV+ +  +I+   K G   E   ++
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMV-KRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     + FTY S I+G C  G +  A+ ++  MV  G F D VTYN +I GFC++
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++++  +L+  M  +G + +  +YN LI G  + GK++ A  ++  + +   + D  T+
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            +L++ LC NG + KA+ ++ ++++             + MD     ++  T N ++ G 
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQK-------------SEMD-----VDIITYNIIIQGL 439

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  KL+ A  LF+ ++RKG  P  ++Y T+I+GLC+     EA    + M E G+ P  
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 469 ITY 471
             Y
Sbjct: 500 RIY 502



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 88/178 (49%)

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +F +A+S   EML+    P ++ ++ ++  + +  K D+ + L  +    G + D+  + 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE 567
           ILIH  C   ++  AL L   M K    P++VT  +L++G  +     +A+ + + +   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 568 RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
              P+++ YN  + GLC    +++A E       +GI    +T++ L+  + N+G  T
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 272/602 (45%), Gaps = 60/602 (9%)

Query: 82  AYGKNSMPDKALDVFQRMNEI-FGCEA----GILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           AY ++ M   AL V  +M ++ F         +L   R  +      N +   G      
Sbjct: 179 AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSEC 238

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +   +I+GL +   L  A++   +   + V  ++V  N ++  F K G    A+  +  L
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSFF-CL 296

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +++  +  +  +YN++++GLC  G  DE L   D M+K+  E D  TY +   G    G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNI 315
           + GA +V ++M+  G+  D VTY  +I G C+ G I+E  +L  E + R   LNV+ YN+
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ--------- 366
           L+  L + G+++EA+++++ +       D   + +LI+GLCK G++ +A Q         
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 367 ----------------------------------------ILNEVEEGGEGRL---ADAA 383
                                                   +L  +   G  RL   A+A 
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  +M + G   +  T N+L+NGF +   L  A  + + +  KG  P+VV+Y TL+N  
Sbjct: 537 QLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAY 596

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+V    E + F+ EM      P  +TY++LI GLC+  K+  +L+L      KG  PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN +I   C   ++  ALQLY+ M   NC P  VTY  L++ L   GD      +   
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I +  +    ++Y   +K  C+  ++S A  + N  L +G + +   +  ++  +   G 
Sbjct: 717 IEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 624 ST 625
            T
Sbjct: 777 IT 778



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 234/498 (46%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     ++A  F + + + G++PDV +Y T+  G +  G + GA  V  +M  +G+  +
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPD 375

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  LI G  + G+   A ++ +   +      NV+ YN++++ LCK GR +E L ++
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQE-TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+    E D   Y   IHGLCK G V+ A ++Y +M     F       A++ G  + 
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I E    ++   R   + +VV YNI+I G +    + EA+ ++  + E+       T 
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C+ G L +A ++L  +      RL             G   +  T  +LMN +
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVI------RLK------------GLVPSVVTYTTLMNAY 596

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++       EM      PT V+Y  LI GLC+  +  E+   ++ M  KG  PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I   C+ K+I  AL+L    L     P    Y +LI+ LC  G ++D  ++  +
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++ RN     VTY T++      G   KAL  +N +L +     I  Y+  +  LC    
Sbjct: 717 IEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 589 MSDAFEFLNDALCRGILP 606
           +++A  F    L  G+ P
Sbjct: 777 ITEAKYFFVMMLSEGVTP 794



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 20/391 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++   ++A +    +  K   P  ++   V+ GL K+G++  A   FD      +  +
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YNI+IDG+ +      A +++ +++ E  + P+VVT+N +ING C+ G   E  +M 
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMI-ERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + ++         TY + ++  C+ GN++       EM  + +    VTY  +I G CR 
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ E  +L E M  KG L + V+YN +I+   +  ++ +A+ ++ ++   NC+    T+
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLIN LC  G                   L D   +V  ++     L   T  +++   
Sbjct: 695 KVLINALCIFG------------------DLKDVDRMVVSIEDRNITLKKVTYMTIIKAH 736

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++  A+  F +M  KG   ++  Y+ +IN LCK     EA  F   ML +G  PD 
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
                ++N   Q        +     ++ GF
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 33/251 (13%)

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT------------------ 438
           N    + L   + +   + +A+F+  +M       +V +YN+                  
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEI 228

Query: 439 --------------LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
                         LI+GLC+  +  +A SF+ +   K   P +++ + +++  C+   I
Sbjct: 229 KVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLI 287

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D+A    C  ++ G   D   YNIL+HGLC AG +++AL    +M+K    P++VTYNTL
Sbjct: 288 DVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTL 347

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
             G    G    A ++   +L + L PD+++Y   + G C    + +A +   + L RG 
Sbjct: 348 AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407

Query: 605 LPTTITWHILV 615
               I +++L+
Sbjct: 408 KLNVIFYNMLL 418



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 35/217 (16%)

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEK--GWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +++I  L   +  G A      +LEK   W  + + + +L     + + I  AL +  + 
Sbjct: 137 DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKM 196

Query: 495 LQKGFTPDVTMYNI--------------------------------LIHGLCSAGKVEDA 522
               F   V  YN                                 LIHGLC   K+EDA
Sbjct: 197 KDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA 256

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +    +  K    P++V+ NT+M    K G  D A   +  +++  L  D  SYNI L G
Sbjct: 257 ISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHG 315

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           LC    M +A  F +D    G+ P  +T++ L +  +
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL 352


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 221/420 (52%), Gaps = 19/420 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++  ++ +++ + K  ++D  + +W++M+      +  T    ++  C+   +  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
             +M++ G     VT+ ++++GFCR  ++ +   +++ M   G   NVV YN +I GL +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           + +VD A+ +   + +     D  T+  LI+GLC +G                  R +DA
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG------------------RWSDA 240

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             +V+ M K     + +T N+L++  ++  ++  A   ++EM R+   P +V+Y+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LC   R  EA      M+ KG  PD++TYS+LING C+SKK++  +KL C+  Q+G   +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              Y ILI G C AGK+  A +++  M      PN++TYN L+ GL   G  +KAL I  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            + +  +  DI++YNI ++G+C    ++DA++      C+G++P   T+  ++  +   G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 228/441 (51%), Gaps = 20/441 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       + ++++M   G+  N+   NIL++ F +      A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             +++ +    P++VT+  ++NG C+  R  + L M+D+M     + +   Y + I GLC
Sbjct: 139 LGKMI-KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K+  V+ A  +   M + GI  D VTYN++I G C +G+  +   +   M ++    +V 
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++N LI   ++ G+V EA   +E +  ++ + D  T+ +LI GLC               
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM-------------- 303

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 RL +A  +   M   GC  +  T + L+NG+ ++ K+E+ + LF EMS++G   
Sbjct: 304 ----YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V+Y  LI G C+  +   A    + M+  G  P++ITY++L++GLC + KI+ AL + 
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
               + G   D+  YNI+I G+C AG+V DA  +Y ++  +  +P++ TY T+M GL+K 
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479

Query: 552 GDCDKALEIWNHILEERLRPD 572
           G   +A  ++  + E+ + P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 214/443 (48%), Gaps = 32/443 (7%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           S  LF H+++    P  +   SR+L  I   K Y   DV + + +      +P       
Sbjct: 65  SLDLFFHMVQCRPLPS-IADFSRLLSAISKMKKY---DVVIYLWEQMQMLGIPHNLCTC- 119

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
              N +  C     CR  Q   A  FL  + + G +P + ++G+++NG  +   +  AL 
Sbjct: 120 ---NILLNC----FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +FD+M   G + NVV YN +IDG  K      A ++  R+  +  + P+VVTYN +I+GL
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGL 231

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C  GR+ +   M   M K E   D FT+ + I    K G V  AE  Y EM+   +  D 
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTY+ +I G C   ++ E  E++  M  KGC  +VV+Y+ILI G  ++ KV+  + ++  
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + ++    ++ T+ +LI G C+ G LN A +I                    RM   G  
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF------------------RRMVFCGVH 393

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N  T N L++G     K+E A+ +  +M + G    +V+YN +I G+CK     +A+  
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453

Query: 456 VKEMLEKGWKPDMITYSLLINGL 478
              +  +G  PD+ TY+ ++ GL
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGL 476



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 170/323 (52%), Gaps = 20/323 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +Q + A   LN + + G+ PDV +Y ++I+GL  SG    A  +   M +R +  +
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +N LID   K+G    A+E +E ++   S+ P++VTY+++I GLC   R DE  EM+
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       D  TY   I+G CK+  VE   +++ EM + G+  + VTY  +I G+CRA
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+    E++  M   G   N+++YN+L+ GL +NGK+++A+ I   +++   +AD  T+
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++I G+CK                   G +ADA  +   ++  G   + +T  ++M G 
Sbjct: 435 NIIIRGMCK------------------AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476

Query: 409 IQASKLENAIFLFKEMSRKGCSP 431
            +      A  LF++M   G  P
Sbjct: 477 YKKGLRREADALFRKMKEDGILP 499



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 140/307 (45%), Gaps = 51/307 (16%)

Query: 5   AKRLLN-LLKAEKNP--HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           A R+++ + K E  P   T  AL D+  +E   + +   +  ++RR +DP +V +   I 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI- 298

Query: 62  ELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKR 121
                                YG                         LC   + ++A+ 
Sbjct: 299 ---------------------YG-------------------------LCMYSRLDEAEE 312

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
               +  KG  PDV +Y  +ING  KS  +   + +F EM +RGV  N V Y ILI G+ 
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           + G    A+EI+ R+V    V+PN++TYNV+++GLC  G+ ++ L +   M+KN  + D 
Sbjct: 373 RAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
            TY   I G+CKAG V  A  +Y  +   G+  D  TY  M+ G  + G  +E   L+  
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491

Query: 302 MGRKGCL 308
           M   G L
Sbjct: 492 MKEDGIL 498



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 121/219 (55%), Gaps = 1/219 (0%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           L NG I+  KL++++ LF  M +    P++  ++ L++ + K++++       ++M   G
Sbjct: 53  LRNG-IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              ++ T ++L+N  C+  ++ +AL    + ++ G  P +  +  L++G C   +V DAL
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            ++  M      PN+V YNT++DGL K+   D AL++ N + ++ + PD+++YN  + GL
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           CS  R SDA   ++    R I P   T++ L+ A +  G
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 260/528 (49%), Gaps = 48/528 (9%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++ + ++A++ L +   +G  PDVY Y  +I    K G+L+ A+  ++ M   G+ETN
Sbjct: 10  LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETN 69

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
               + L+  F K G  M ++ I   L  + S ++ + V YN+ ++  CK G  +E +++
Sbjct: 70  CHIVSYLLQCFRKLG--MTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKL 127

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            + MK      D   Y   I+G C  G ++ A++V+ EM+++ I  D VTYN +  GFC+
Sbjct: 128 LNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCK 187

Query: 289 AGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           +G + E F+L + M   G   N ++Y I I G    G + EA  ++ ++ EK  +     
Sbjct: 188 SGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVM 247

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           +  ++ G   +G+ + A                    L  R+ + G  ++ ++C+ L+N 
Sbjct: 248 YSSMVCGYLLSGWTDHAYM------------------LFVRVARQGNLVDHFSCSKLIND 289

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +   ++ A  + K M      P V+SY+ LI+  C+     +A+ +  +M+++G   D
Sbjct: 290 LCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSID 349

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ--- 524
           +I Y++L+NG C++ ++  A +L  Q    G  PDV  Y +L+      G +++ LQ   
Sbjct: 350 VIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGW 404

Query: 525 ------------------LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
                             L S+MK     P++  Y  L+DG  K     +A E+++ +L+
Sbjct: 405 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 464

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           + L PD  +Y   + G CS   +S A + L + + +GI P  +T+ +L
Sbjct: 465 KGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 215/489 (43%), Gaps = 77/489 (15%)

Query: 207 VTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYRE 266
           + YN++++GLCK  R DE  ++ +   +     D + Y   I   CK GN+  A   Y  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 267 MV-----------------------------------ESGIFVDAVTYNAMIDGFCRAGK 291
           MV                                   +SG+ +D V YN  +D +C+ G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           + E  +L   M   G   + + Y  LI G    G++  A  ++E + + N   D  T+ +
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
           L +G CK+G + +   +L+ + + G                  G L++A  L N +++ G
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
                   +S++ G++ +   ++A  LF  ++R+G      S + LIN LC+V     A 
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 300

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           +  K MLE    PD+I+YS LI+  CQ+  +D A       +Q+G + DV +Y IL++G 
Sbjct: 301 NVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER----- 568
           C AG++++A QL+  M      P+++ Y  L+DG  K    +   + W  I +ER     
Sbjct: 361 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK----ETLQQGWEGIAKERRSFLL 416

Query: 569 ---------------LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
                          + PD+  Y + + G C    + +A E  ++ L +G+ P    +  
Sbjct: 417 RANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTA 476

Query: 614 LVRAVMNNG 622
           L+    + G
Sbjct: 477 LINGYCSQG 485



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 206/458 (44%), Gaps = 26/458 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           ++Q + K  M  + +  F +  +        I+       C+     +A + LN +   G
Sbjct: 76  LLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGG 135

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L PD   Y  +ING    G++  A  VF+EM +  +E ++V YNIL  GF K G  M   
Sbjct: 136 LTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVF 195

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           ++ +R+  +  + PN +TY + I G C+ G   E   +++ +++   +     Y S + G
Sbjct: 196 DLLDRMA-DHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCG 254

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
              +G  + A  ++  +   G  VD  + + +I+  CR G ++    + ++M     + +
Sbjct: 255 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPD 314

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V+SY+ LI    +NG +D+A   +  + ++  + D   + +L+NG CK G L +A Q+  
Sbjct: 315 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLF- 373

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF-------LFK 422
            V+    G   D  +    +D H          +L  G+   +K   +         L  
Sbjct: 374 -VQMTNLGIKPDVIAYTVLLDGH-------LKETLQQGWEGIAKERRSFLLRANHNKLLS 425

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
            M      P V  Y  LI+G CK E   EA     EML+KG  PD   Y+ LING C   
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           +I  A  L  + + KG  PD   +++L      + K++
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 523



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           I C+    +KA  + + + ++GL  DV  Y  ++NG  K+G L  A  +F +M   G++ 
Sbjct: 324 IYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKP 383

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVME-------------------TSVYPNVVTY 209
           +V+ Y +L+DG  K+      ++ WE +  E                     + P+V  Y
Sbjct: 384 DVIAYTVLLDGHLKE----TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCY 439

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
            V+I+G CK     E  E++D M +     D++ Y + I+G C  G +  AE + +EM++
Sbjct: 440 TVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMID 499

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKEC 295
            GI  D +T++ +     R+ KI+ C
Sbjct: 500 KGIEPDELTFSVLNQSSLRSRKIQFC 525


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 253/513 (49%), Gaps = 36/513 (7%)

Query: 112 RKRQFEKAKRFLN-SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           R+    KAK FL+ +L EKG      S    I GL  S       + + EM   G+    
Sbjct: 2   RRSISSKAKSFLHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYMK 61

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           +  +  +D FF               +++    P++  ++ +++ + K  ++D  + +W+
Sbjct: 62  L--DDSLDLFFH--------------MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M+      +  T    ++  C+   +  A     +M++ G   D VT+ ++++GFCR  
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGD 165

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           +I +   +++ M   G   NVV YN +I GL ++ +VD A+ +   +       D+ T+ 
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
            LI+GLC +G                  R  DA  +V+ M K     + +T N+L++  +
Sbjct: 226 SLISGLCNSG------------------RWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +  ++  A  L++EM R+   P +V+Y+ LI GLC   R  EA      M+ KG  PD++
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
           TYS+LING C+SKK++  +KL C+  Q+G   +   Y +LI G C AGK+  A +++  M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
                 PN++TYN L+ GL   G  +KAL I   + +  +  DI++YNI ++G+C    +
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +DA++       +G+ P   T+  ++  +   G
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 228/441 (51%), Gaps = 20/441 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +  +  +++ + K       + ++++M   G+  N+   NIL++ F +      A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
             ++ M+    P++VT+  ++NG C+  R  + L M+DRM +   E +   Y + I GLC
Sbjct: 139 LGKM-MKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVV 311
           K+  V+ A  +   M   GI  DAVTYN++I G C +G+  +   +   M ++    +V 
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           ++N LI   ++ G++ EA  ++E +  ++ + D  T+ +LI GLC               
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM-------------- 303

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                 RL +A  +   M   GC  +  T + L+NG+ ++ K+E+ + LF EMS++G   
Sbjct: 304 ----YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
             V+Y  LI G C+  +   A    K M+  G  P++ITY++L++GLC + KI+ AL + 
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
               + G   D+  YNI+I G+C AG+V DA  LY ++  +   P++ TY  +M GL+K 
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479

Query: 552 GDCDKALEIWNHILEERLRPD 572
           G   +A  ++  + E+ + P+
Sbjct: 480 GLRGEADALFRKMKEDGILPN 500



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 216/443 (48%), Gaps = 32/443 (7%)

Query: 37  SPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVF 96
           S  LF H+++    P  +   SR+L  I   K Y   DV + + +      +P       
Sbjct: 65  SLDLFFHMVQCRPLPS-IADFSRLLSAISKMKKY---DVVIYLWEQMQMLGIPHNLCTC- 119

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALA 156
              N +  C     CR  Q   A  FL  + + G +PD+ ++G+++NG  +   +  AL 
Sbjct: 120 ---NILLNC----FCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALY 172

Query: 157 VFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGL 216
           +FD M E G E NVV YN +IDG  K      A ++  R+ ++  + P+ VTYN +I+GL
Sbjct: 173 MFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSLISGL 231

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           C  GR+D+   M   M K E   D FT+ + I    K G +  AE +Y EM+   +  D 
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWEL 335
           VTY+ +I G C   ++ E  +++  M  KGC  +VV+Y+ILI G  ++ KV+  + ++  
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCK 395
           + ++    ++ T+ VLI G C+ G LN A +I                     M   G  
Sbjct: 352 MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW------------------MVFCGVP 393

Query: 396 LNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
            N  T N L++G     K+E A+ +  +M + G    +V+YN +I G+CK     +A+  
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDL 453

Query: 456 VKEMLEKGWKPDMITYSLLINGL 478
              +  KG  PD+ TY+ ++ GL
Sbjct: 454 YCSLNLKGLTPDIWTYTAMMLGL 476



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 48/286 (16%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQA 82
           AL D+  +E   + +  L+  ++RR +DP +V +   I                      
Sbjct: 261 ALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI---------------------- 298

Query: 83  YGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
           YG                         LC   + ++A++    +  KG  PDV +Y  +I
Sbjct: 299 YG-------------------------LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           NG  KS  +   + +F EM +RGV  N V Y +LI G+ + G    A+EI++ +V    V
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF-CGV 392

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAER 262
            PN++TYNV+++GLC  G+ ++ L +   M+K+  + D  TY   I G+CKAG V  A  
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +Y  +   G+  D  TY AM+ G  + G   E   L+  M   G L
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGIL 498


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 234/483 (48%), Gaps = 21/483 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  KA   L  +    L PDV+SY TVI G  +  +L  AL + +EM   G   +
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V + ILID F K G    A    + +     +  ++V Y  +I G C CG  D    ++
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D + +      + TY + I G CK G ++ A  ++  M+E G+  +  TY  +IDG C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK KE  +   +M  K    N V+YNI+I  L ++G V +A+ I EL++++    D+ T+
Sbjct: 331 GKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390

Query: 349 GVLINGLCKNGYLNKAIQIL-----------------NEVEEG--GEGRLADAASLVNRM 389
            +L+ GLC  G L++A ++L                 N +  G   E RL  A  + + +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
            +     +  T N L+N  ++A  +  A+ L+K++S         +Y  +I+G CK    
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             A   + +M     +P +  Y+ L++ LC+   +D A +L  +  +    PDV  +NI+
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G   AG ++ A  L   M +    P+L TY+ L++   K G  D+A+  ++ +++   
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630

Query: 570 RPD 572
            PD
Sbjct: 631 EPD 633



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 284/635 (44%), Gaps = 89/635 (14%)

Query: 42  HHILRRLIDPKLVVHVSRILELIEIQKCYCPEDV------ALSVIQAY----------GK 85
            H++R+L++P++   +       E +     ED       A+SV Q            G 
Sbjct: 17  EHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGS 76

Query: 86  NSMP--------DKALDVFQRMNEI-----FGCEAGIL---CRKRQFEKAKRFLNSLWEK 129
           N M         + A   +++M E      F   +G+L    + R+   A   L  + ++
Sbjct: 77  NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G   +VY++  ++ GL ++ +   A+++  EM    +  +V  YN +I GF +  +  +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            E+   +      + ++VT+ ++I+  CK G+ DE +     MK    E D   Y S I 
Sbjct: 197 LELANEMKGSGCSW-SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
           G C  G ++  + ++ E++E G    A+TYN +I GFC+ G++KE  E++E M  +G   
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           NV +Y  LI GL   GK  EA+    L+ EK+   ++ T+ ++IN LCK+G +       
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLV------- 368

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                      ADA  +V  M K   + +  T N L+ G      L+ A  L   M +  
Sbjct: 369 -----------ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 429 --CSPTVVSYNTLINGLCKVERFGEA---YSFVKEMLEKG-------------------- 463
               P V+SYN LI+GLCK  R  +A   Y  + E L  G                    
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 464 ----WKP--------DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
               WK         +  TY+ +I+G C++  +++A  L C+       P V  YN L+ 
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC  G ++ A +L+  M++ N  P++V++N ++DG  K GD   A  +   +    L P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
           D+ +Y+  +        + +A  F +  +  G  P
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 248/507 (48%), Gaps = 32/507 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEA-----GIL----CRKRQFEKAKRFLNSLWE 128
           +VI+ + +    +KAL++   M    GC       GIL    C+  + ++A  FL  +  
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
            GL+ D+  Y ++I G    G+L    A+FDE+ ERG     + YN LI GF K G    
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A EI+E  ++E  V PNV TY  +I+GLC  G+  E L+  + M + + E ++ TY   I
Sbjct: 301 ASEIFE-FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIII 359

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           + LCK G V  A  +   M +     D +TYN ++ G C  G + E  +L  +M +    
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 309 ---NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              +V+SYN LI GL +  ++ +A+ I++LL EK    D  T  +L+N   K G +NKA+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++  ++ +    R                  N+ T  ++++GF +   L  A  L  +M 
Sbjct: 480 ELWKQISDSKIVR------------------NSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
                P+V  YN L++ LCK     +A+   +EM      PD+++++++I+G  ++  I 
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L     + G +PD+  Y+ LI+     G +++A+  +  M      P+    ++++
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPD 572
                 G+ DK  E+   ++++ +  D
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIVLD 668



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 214/405 (52%), Gaps = 26/405 (6%)

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
           +F   + +  L ++ N E A   YR+M+E+  F++ V+ + +++ + +  K    F +  
Sbjct: 72  AFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 301 VMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           +M ++G   NV ++NIL++GL  N +  +A+S+   +R  +   D  ++  +I G C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            L KA+++ NE++  G                  G++ +A   +  M   G + +     
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+ GF    +L+    LF E+  +G SP  ++YNTLI G CK+ +  EA    + M+E+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G +P++ TY+ LI+GLC   K   AL+     ++K   P+   YNI+I+ LC  G V DA
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER--LRPDIISYNITL 580
           +++   MKKR   P+ +TYN L+ GL   GD D+A ++   +L++     PD+ISYN  +
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 581 KGLCSCSRMS---DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            GLC  +R+    D ++ L + L  G     +T +IL+ + +  G
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAG 473



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 236/492 (47%), Gaps = 22/492 (4%)

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
            ++   ++  LV+S +   A + + +M E     N V  + L++ + +      A  +  
Sbjct: 72  AFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
            L+++     NV  +N+++ GLC+     + + +   M++N    D F+Y + I G C+ 
Sbjct: 132 -LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSY 313
             +E A  +  EM  SG     VT+  +ID FC+AGK+ E     + M   G   ++V Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LIRG  + G++D   ++++ + E+  +  + T+  LI G CK                
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---------------- 294

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
              G+L +A+ +   M + G + N YT   L++G     K + A+     M  K   P  
Sbjct: 295 --LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNA 352

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+YN +IN LCK     +A   V+ M ++  +PD ITY++L+ GLC    +D A KL   
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 494 FLQ-KGFT-PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            L+   +T PDV  YN LIHGLC   ++  AL +Y  + ++    + VT N L++   K 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
           GD +KA+E+W  I + ++  +  +Y   + G C    ++ A   L       + P+   +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 612 HILVRAVMNNGA 623
           + L+ ++   G+
Sbjct: 533 NCLLSSLCKEGS 544


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 199/376 (52%), Gaps = 23/376 (6%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLCKAGNVEGAERVYRE 266
           TY V++   C  G     +++   M++      + + Y  F+H LCK+G V  A  V + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGK 325
           M +     D VT+N +I G C+AG++ E  ++ + M R G   N+V+YN LI GL   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
             EA+ + + +       D+ T+  +I+G CK+G +++A   L E+++            
Sbjct: 140 SGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQ------------ 184

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLC 444
                + GC  + +T + L+NG  ++S L  A  L +EM  RK C  +VV++NTL++G C
Sbjct: 185 -----RAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC 239

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K +    A   +  MLE G  PD++TYS +I+GLC+   +D    L  + + +G  PDV 
Sbjct: 240 KAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVV 299

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y +L+ GLC AGK+ +A +L   M +  C PN VTY+ + DGL K    D A ++   I
Sbjct: 300 TYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359

Query: 565 LEERLRPDIISYNITL 580
            ++    D++++   L
Sbjct: 360 RDKGRVTDVVAFETLL 375



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 207/374 (55%), Gaps = 20/374 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y +L+      G+   A ++   +  +  + P    YN  ++ LCK G+  E +E+   M
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           K    + D  T+ + I GLCKAG ++ A++V  EM  SG   + VTYN +I+G   AG+ 
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 293 KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK-NCNADSTTHGVL 351
            E   + +  G     +  +YN +I G  ++G++D A    E ++++  C+ D+ T+ +L
Sbjct: 141 GEAVLVMQ--GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           INGLCK+  L KA ++L E              ++ R D   C  +    N+L++G+ +A
Sbjct: 199 INGLCKSSNLRKADELLQE--------------MIGRKD---CCASVVAFNTLVDGYCKA 241

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L+ A  L   M   GC+P VV+Y+T+I+GLC+     + ++ +++M+ +G KPD++TY
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++L+ GLC++ K+  A +L  + L+ G TP+   Y+++  GLC   K++ A  L ++++ 
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361

Query: 532 RNCVPNLVTYNTLM 545
           +  V ++V + TL+
Sbjct: 362 KGRVTDVVAFETLL 375



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 18/362 (4%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS--YNILIRGLLENGKVDEAISI 332
           D  TY  ++   C AG+++   +L   M ++  +      YN  +  L ++GKV EA+ +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDK 391
            + +++  C  D  T   LI GLCK G L++A Q+L+E+E  G    L    +L+N +  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 392 HG-------------CKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYN 437
            G                +  T N++++GF ++ +++ A    +EM  R GCSP   +Y+
Sbjct: 137 AGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 438 TLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            LINGLCK     +A   ++EM+  K     ++ ++ L++G C+++ +D A +L    L+
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PDV  Y+ +I GLC  G V+    L   M  R C P++VTY  L+ GL K G   +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  +   +LE+   P+ ++Y++   GLC   ++  A + L     +G +   + +  L+ 
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376

Query: 617 AV 618
           +V
Sbjct: 377 SV 378



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 23/299 (7%)

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------------EGRLADAASL 385
           D+ T+ VL+   C  G L  A+ +L E+E+                     G++ +A  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M    CK +  T N+L+ G  +A +L+ A  +  EM R G +  +V+YNTLINGL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVT 504
             R GEA   ++ M      PD  TY+ +I+G C+S +ID A     +  Q+ G +PD  
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 505 MYNILIHGLCSAGKVEDALQLYSNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            Y+ILI+GLC +  +  A +L   M  +++C  ++V +NTL+DG  K  D D+A E+ + 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +LE    PD+++Y+  + GLC C  +   F  L   + RG  P  +T+ +LV  +   G
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 19/334 (5%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL- 77
             A+ L     ++PG A +P +++  +  L     V     +++ ++   C  P+ V   
Sbjct: 35  QAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-PDVVTFN 93

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKG------- 130
           ++I    K    D+A  V   M       +G       +      L+S    G       
Sbjct: 94  TLIAGLCKAGRLDEAQQVLDEMER-----SGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148

Query: 131 ---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDY 186
                PD  +Y  +I+G  KSG++  A    +EM +R G   +   Y+ILI+G  K  + 
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            +A E+ + ++       +VV +N +++G CK    D   E+   M ++    D  TY +
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLC+ G+V+    +  +MV  G   D VTY  ++ G C+AGK+ E   L + M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           C  N V+Y+++  GL +  K+D A  +   +R+K
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKR-NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           Y +L+   C AG+++ A+ L   M+++    P    YN  +  L K+G   +A+E+  ++
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            +   +PD++++N  + GLC   R+ +A + L++    G     +T++ L+  + + G S
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 281/605 (46%), Gaps = 36/605 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y H P +++ +L  L   KL     R+L L++ +  Y
Sbjct: 180 VLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIY 239

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
              +    V+ +Y +      AL V   M    G E  +L          R  + EKA R
Sbjct: 240 RTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA-GVEPNLLICNTTIDVFVRANRLEKALR 298

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL  +   G+ P+V +Y  +I G      +  A+ + ++M  +G   + V Y  ++    
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+   +  +++ +++  E  + P+ VTYN +I+ L K    DE L      ++     D 
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESG-IFVDAVTYNAMIDGFCRAGKIKECFELWE 300
             Y + +H LCK G +  A+ +  EM+  G    D VTY A+++GFCR G++ +  +L +
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
           VM   G   N VSY  L+ G+   GK  EA  +  +  E   + +S T+ V+++GL + G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
            L++A  ++ E+   G                 +GR  +A   +      GC +N     
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++++GF Q  +L+ A+ +  +M        V +Y TL++ L K  R  EA   +K+ML K
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P  +TY  +I+  CQ  K+D  + +  + + +      T+YN +I  LC  GK+E+A
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR--TIYNQVIEKLCVLGKLEEA 716

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI-----ISYN 577
             L   + +     +  T   LM+G  K G    A ++   +    L PD+     +S  
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776

Query: 578 ITLKG 582
           + LKG
Sbjct: 777 LVLKG 781



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 225/487 (46%), Gaps = 22/487 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           + D   Y +++  L K+    G+  V   M  RG+      ++ ++  + + G    A +
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +   L+    V PN++  N  I+   +  R ++ L   +RM+      +  TY   I G 
Sbjct: 264 VLT-LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           C    VE A  +  +M   G   D V+Y  ++   C+  +I E  +L + M ++  L  +
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN LI  L ++   DEA+   +  +EK    D   +  +++ LCK            
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK------------ 430

Query: 370 EVEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                 EGR+++A  L+N M   G C  +  T  +++NGF +  +++ A  L + M   G
Sbjct: 431 ------EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  VSY  L+NG+C+  +  EA   +    E  W P+ ITYS++++GL +  K+  A 
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  + + KGF P     N+L+  LC  G+  +A +       + C  N+V + T++ G 
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTT 608
            +  + D AL + + +       D+ +Y   +  L    R+++A E +   L +GI PT 
Sbjct: 605 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664

Query: 609 ITWHILV 615
           +T+  ++
Sbjct: 665 VTYRTVI 671



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 210/445 (47%), Gaps = 23/445 (5%)

Query: 108 GILCRKRQFEKAKRFLNSLW-EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           G LC++++  + +  +  +  E GL PD  +Y T+I+ L K      AL    +  E+G 
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF 414

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             + + Y+ ++    K+G    AK++   ++ +    P+VVTY  ++NG C+ G  D+  
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++   M  +  + ++ +Y + ++G+C+ G    A  +     E     +++TY+ ++ G 
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
            R GK+ E  ++   M  KG     V  N+L++ L  +G+  EA    E    K C  + 
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEV-----------------EEGGEGRLADAASLVNR 388
                +I+G C+N  L+ A+ +L+++                   G +GR+A+A  L+ +
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVE 447
           M   G      T  ++++ + Q  K+++ + + ++M SR+ C      YN +I  LC + 
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI---YNQVIEKLCVLG 711

Query: 448 RFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYN 507
           +  EA + + ++L    + D  T   L+ G  +      A K+ C+   +   PDV M  
Sbjct: 712 KLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCE 771

Query: 508 ILIHGLCSAGKVEDALQLYSNMKKR 532
            L   L   GKV++A +L   + +R
Sbjct: 772 KLSKRLVLKGKVDEADKLMLRLVER 796



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 62/429 (14%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VE 167
           +L +    ++A  FL    EKG + D   Y  +++ L K G +  A  + +EM  +G   
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECL 226
            +VV Y  +++GF + G+  +AK++ +  VM T  + PN V+Y  ++NG+C+ G+  E  
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQ--VMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           EM +  +++    +S TY   +HGL + G +  A  V REMV  G F   V  N ++   
Sbjct: 510 EMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569

Query: 287 CRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           CR G+  E  +  E    KGC +NVV++  +I G  +N ++D A+S+ + +   N +AD 
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T+  L++ L                  G +GR+A+A  L+ +M   G      T  +++
Sbjct: 630 FTYTTLVDTL------------------GKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671

Query: 406 NGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + + Q  K+++ + + ++M SR+ C      YN +I  LC + +  EA + + ++L    
Sbjct: 672 HRYCQMGKVDDLVAILEKMISRQKCRTI---YNQVIEKLCVLGKLEEADTLLGKVLRTAS 728

Query: 465 KPDMITYSLLING---------------------------LCQS--------KKIDMALK 489
           + D  T   L+ G                           +C+          K+D A K
Sbjct: 729 RSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADK 788

Query: 490 LCCQFLQKG 498
           L  + +++G
Sbjct: 789 LMLRLVERG 797



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 2/250 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L DA  ++  M + G + N   CN+ ++ F++A++LE A+   + M   G  P VV+Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +I G C + R  EA   +++M  KG  PD ++Y  ++  LC+ K+I     L  +  +
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375

Query: 497 K-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G  PD   YN LIH L      ++AL    + +++    + + Y+ ++  L K G   
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435

Query: 556 KALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           +A ++ N +L +    PD+++Y   + G C    +  A + L      G  P T+++  L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495

Query: 615 VRAVMNNGAS 624
           +  +   G S
Sbjct: 496 LNGMCRTGKS 505



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 77/152 (50%)

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           ++ D + Y  ++  L ++K    + ++     ++G       ++ ++     AG++ DAL
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++ + M++    PNL+  NT +D   +    +KAL     +    + P++++YN  ++G 
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C   R+ +A E L D   +G LP  ++++ ++
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 203/400 (50%), Gaps = 20/400 (5%)

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
           + +KA+ F+  +   G KP+V SY T+I+G    G++ GA  + D M  +G+E +   Y 
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LI G  K+G    A  +++++V E  + PN VTYN +I+G C  G  +      D M K
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                   TY   +H L   G +  A+ + +EM + GI  DA+TYN +I+G+ R G  K 
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 295 CFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            F+L   M  KG     V+Y  LI  L    ++ EA  ++E + ++  + D      +I+
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
           G C NG + +A  +L E                  MD+     +  T N+LM G  +  K
Sbjct: 427 GHCANGNVERAFMLLKE------------------MDRKSVPPDEVTFNTLMQGRCREGK 468

Query: 414 LENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSL 473
           +E A  L  EM  +G  P  +SYNTLI+G  +     +A+    EML  G+ P ++TY+ 
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 474 LINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
           LI  LC++++ D+A +L  + + KG +PD + Y  LI G+
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 192/374 (51%), Gaps = 21/374 (5%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PNVV+YN +I+G    G  +    + D M+    E DS+TY S I G+CK G +E A  +
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS-YNILIRGLLE 322
           + +MVE G+  +AVTYN +IDG+C  G ++  F   + M +KG +  VS YN+L+  L  
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++ EA  + + +R+K    D+ T+ +LING  + G   +A  + NE+   G       
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                       R+ +A  L  ++   G   +    N++++G      +E A  L KEM 
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           RK   P  V++NTL+ G C+  +  EA   + EM  +G KPD I+Y+ LI+G  +   I 
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIK 505

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  +  + L  GF P +  YN LI  LC   + + A +L   M  +   P+  TY +L+
Sbjct: 506 DAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565

Query: 546 DGLFKTGDCDKALE 559
           +G+   G+ D  +E
Sbjct: 566 EGM---GNVDTLVE 576



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 191/379 (50%), Gaps = 19/379 (5%)

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
           +Y + IHG    GN+EGA R+   M   GI  D+ TY ++I G C+ G+++E   L++ M
Sbjct: 210 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 269

Query: 303 GRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
              G + N V+YN LI G    G ++ A S  + + +K      +T+ +L++ L      
Sbjct: 270 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM---- 325

Query: 362 NKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                         EGR+ +A  ++  M K G   +A T N L+NG+ +    + A  L 
Sbjct: 326 --------------EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            EM  KG  PT V+Y +LI  L +  R  EA    +++L++G  PD+I ++ +I+G C +
Sbjct: 372 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCAN 431

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
             ++ A  L  +  +K   PD   +N L+ G C  GKVE+A  L   MK R   P+ ++Y
Sbjct: 432 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISY 491

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           NTL+ G  + GD   A  + + +L     P +++YN  +K LC       A E L + + 
Sbjct: 492 NTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551

Query: 602 RGILPTTITWHILVRAVMN 620
           +GI P   T+  L+  + N
Sbjct: 552 KGISPDDSTYLSLIEGMGN 570



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 179/368 (48%), Gaps = 54/368 (14%)

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+K+  E    M   G   NVVSYN +I G    G ++ A  I + +R K    DS T+
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           G LI+G+CK                  EGRL +A+ L ++M + G   NA T N+L++G+
Sbjct: 247 GSLISGMCK------------------EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 288

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                LE A     EM +KG  P+V +YN L++ L    R GEA   +KEM +KG  PD 
Sbjct: 289 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 348

Query: 469 ITYSLLING-----------------------------------LCQSKKIDMALKLCCQ 493
           ITY++LING                                   L +  ++  A  L  +
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            L +G +PDV M+N +I G C+ G VE A  L   M +++  P+ VT+NTLM G  + G 
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A  + + +    ++PD ISYN  + G      + DAF   ++ L  G  PT +T++ 
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 614 LVRAVMNN 621
           L++ +  N
Sbjct: 529 LIKCLCKN 536



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 178/377 (47%), Gaps = 55/377 (14%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     +C++ + E+A    + + E GL P+  +Y T+I+G    GDL  A +  DEM 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G+  +V  YN+L+   F +G    A ++ + +  +  + P+ +TYN++ING  +CG  
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNA 364

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
               ++ + M     E    TY S I+ L +   ++ A+ ++ ++++ G+  D + +NAM
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           IDG C  G ++  F L + M RK    + V++N L++G    GKV+EA  + + ++ +  
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             D  ++  LI+G  + G +  A  + +E+                              
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEM------------------------------ 514

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
             L  GF                     +PT+++YN LI  LCK +    A   +KEM+ 
Sbjct: 515 --LSIGF---------------------NPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551

Query: 462 KGWKPDMITYSLLINGL 478
           KG  PD  TY  LI G+
Sbjct: 552 KGISPDDSTYLSLIEGM 568



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 131/247 (53%)

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
           EG+L  A   +  M+  G K N  + N++++G+     +E A  +   M  KG  P   +
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y +LI+G+CK  R  EA     +M+E G  P+ +TY+ LI+G C    ++ A     + +
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +KG  P V+ YN+L+H L   G++ +A  +   M+K+  +P+ +TYN L++G  + G+  
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A ++ N +L + + P  ++Y   +  L   +RM +A +     L +G+ P  I ++ ++
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 616 RAVMNNG 622
                NG
Sbjct: 426 DGHCANG 432



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+ + E+A+  L+ +  +G+KPD  SY T+I+G  + GD+  A  V DEM   G    +
Sbjct: 464 CREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTL 523

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           + YN LI    K  +   A+E+ + +V    + P+  TY  +I G+   G  D  +E
Sbjct: 524 LTYNALIKCLCKNQEGDLAEELLKEMV-NKGISPDDSTYLSLIEGM---GNVDTLVE 576


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 233/490 (47%), Gaps = 56/490 (11%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR  +  ++  FL S+  KG KPDV     +I G   S +L  A+ V  E+ E   + +V
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETYGDPDV 131

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN +I GF K      A ++++R+       P+VVTYN+MI  LC  G+ +   E+ D
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            + K+  +    TY   I      G +  A  ++ E+V  G+  D  TYNA+I G C+ G
Sbjct: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEG 250

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
                 +    +  +GC  +VVSYNIL+R  L   + ++   + + +    C  +  TH 
Sbjct: 251 MEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHS 310

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +LI+  C+                  EGR+ +A +++  M + G   ++Y+ + L++ F 
Sbjct: 311 ILISSFCR------------------EGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK----------VERFGE-------- 451
           +  +L+ AI   ++M   GC P +V+YNT++  LCK           E+  E        
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412

Query: 452 -----------------AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
                            A   + EM+ KG  PD ITY+ LI+ LC+   +D A+ L    
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472

Query: 495 LQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDC 554
               F P V  +NI++ G+C A +V + ++L   M ++ C+PN  +Y  L++G+   G  
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR 532

Query: 555 DKALEIWNHI 564
            +A+E+ N +
Sbjct: 533 AEAMELANSL 542



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 226/476 (47%), Gaps = 56/476 (11%)

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           ++N   ++G    +L   + +  +G + +VV    LI GFF   +  +A  + E  ++ET
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME--ILET 125

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
              P+V +YN M                                   I G  KA  ++ A
Sbjct: 126 YGDPDVYSYNAM-----------------------------------ISGFSKANQIDSA 150

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
            +V+  M   G   D VTYN MI   C  GK++  FE+ + + + GC  +V++Y ILI  
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
            +  G+++EA+ +++ L  +    D  T+  +I G+CK G  ++A+              
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALD------------- 257

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                 V  +   GC  +  + N L+  F+  S+ E+   L K+M   GC P VV+++ L
Sbjct: 258 -----FVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+  C+  R  EA + ++ M EKG  PD  +Y  LI+  C+  ++D+A++   + +  G 
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PD+  YN ++  LC  G  + AL ++  + +  C P +  YNT+   L+  G+  KALE
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + + ++ + + PD I+YN  +  LC    + +A   L D       PT I+++I++
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 212/412 (51%), Gaps = 20/412 (4%)

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           ++N  C+ G+ +E L   + +     + D       I G   + N++ A RV  E++E+ 
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
              D  +YNAMI GF +A +I    ++++ M  +G   +VV+YNI+I  L   GK++ A 
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
            + + L +  C     T+ +LI      G +N+A+++ +E              LV+R  
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDE--------------LVSR-- 230

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G + + YT N+++ G  +    + A+   + +S +GC+P VVSYN L+       R+ 
Sbjct: 231 --GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWE 288

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +    +K+M+  G +P+++T+S+LI+  C+  ++  A+ +     +KG TPD   Y+ LI
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLI 348

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
              C  G+++ A++    M    C+P++V YNT++  L K G  D AL+++  + E    
Sbjct: 349 SAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCP 408

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           P + +YN     L SC     A E +++ + +GI P  IT++ L+  +  +G
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 220/480 (45%), Gaps = 42/480 (8%)

Query: 22  LALFDSATREPGYAHSPHLFHHILRRLIDPKLVV------------HVSRILELIEIQKC 69
           + L + + R   +  S +    ++ +   P +V+            ++ + + ++EI + 
Sbjct: 66  MKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILET 125

Query: 70  YCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKA 119
           Y   DV    ++I  + K +  D A  VF RM           +    G LC + + E A
Sbjct: 126 YGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA 185

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
              ++ L + G KP V +Y  +I   +  G +  AL +FDE+  RG+  ++  YN +I G
Sbjct: 186 FEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRG 245

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K+G   RA + + R +      P+VV+YN+++       R+++   +   M  +  E 
Sbjct: 246 ICKEGMEDRALD-FVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  T+   I   C+ G V  A  V   M E G+  D+ +Y+ +I  FC+ G++    E  
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364

Query: 300 EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
           E M   GCL ++V+YN ++  L + G  D A+ ++E L E  C      +  + + L   
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           G   KA+++++E                  M + G   +  T NSL++   +   ++ AI
Sbjct: 425 GNKIKALEMISE------------------MIRKGIDPDEITYNSLISCLCRDGLVDEAI 466

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L  +M      PTV+S+N ++ G+CK  R  E    +  M+EKG  P+  +Y LLI G+
Sbjct: 467 GLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 3/201 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C++ + + A  +L  +   G  PD+ +Y T++  L K G    AL VF+++ E G    
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN +    +  G+ ++A E+   ++ +  + P+ +TYN +I+ LC+ G  DE + + 
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRK-GIDPDEITYNSLISCLCRDGLVDEAIGLL 469

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNV-EGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
             M+    +    ++   + G+CKA  V EG E +   MVE G   +  +Y  +I+G   
Sbjct: 470 VDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLI-TMVEKGCLPNETSYVLLIEGIAY 528

Query: 289 AGKIKECFELWEVMGRKGCLN 309
           AG   E  EL   + R G ++
Sbjct: 529 AGWRAEAMELANSLYRLGVIS 549


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 250/503 (49%), Gaps = 30/503 (5%)

Query: 80  IQAYGKNSMPDKALDVFQRMNE----IFGCE----AGILCRKRQFEKAKRFLNSLWEKGL 131
           I +Y K  + D+AL  F  M +    +F  +     G+L R+ +F+ A+++ + +  +G 
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
             + ++Y   I+GL K  + +    + ++M   G   ++  YNI ++    +     A  
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           + + +V E    P++VTY ++INGLC+ GRFD  +E+W  M +     D     + + GL
Sbjct: 136 VVQTMV-EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNV 310
           C  G V+ A  +    +   I      YN++I+GFC+AG I +   +   M R GC  ++
Sbjct: 195 CHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDL 254

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           V+YN+L+    +   ++EA ++ + +       D  ++  L+ GLCK   L+KA  +   
Sbjct: 255 VTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM--- 311

Query: 371 VEEGGEGRLADAASLVNRMDKHG-CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                         +VN+M+  G C + +Y  N+++     AS  + A  LF+EM  KG 
Sbjct: 312 --------------MVNKMEAKGLCDVVSY--NTIIKALCTASHTKRAYKLFEEMGGKGI 355

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           +P VV++  LI    +      A   + +M   G  PD + Y+ +++ LC++ K+ MA  
Sbjct: 356 TPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHS 415

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           + C  ++ G TPDV  YN LI+GLC A +V +A+ LY +M      P+ VT+  ++ GL 
Sbjct: 416 VFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLI 475

Query: 550 KTGDCDKALEIWNHILEERLRPD 572
                  A  +W+ ++E+    D
Sbjct: 476 WEKKLSVACRVWDQMMEKGFTLD 498



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 231/480 (48%), Gaps = 20/480 (4%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +Y   I+  VK+G +  AL  FDEM +       + YN  I    ++  +  A++ ++R+
Sbjct: 11  AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM 70

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           + +     N  TY+  I+GLCK   F    ++ + M +     D + Y  +++ LC    
Sbjct: 71  IPQ-GFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNI 315
           ++ A  V + MVE G   D VTY  +I+G CRAG+     E+W  M RKG   +  +   
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           L+ GL  +GKVD A  +             + +  LING C+ G+++KA           
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKA----------- 238

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                   S+++ M ++GC+ +  T N L+N       LE A  L K+M R G  P V S
Sbjct: 239 -------QSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYS 291

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           YN L+ GLCK  R  +AY  +   +E     D+++Y+ +I  LC +     A KL  +  
Sbjct: 292 YNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMG 351

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            KG TPDV  + ILI      G    A +L   M     +P+ V Y T++D L KTG   
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A  ++  ++E  + PD++SYN  + GLC  SR+S+A     D    G  P  +T+ +++
Sbjct: 412 MAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLII 471



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 201/441 (45%), Gaps = 53/441 (12%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ + F   ++ L  +   G  PD+++Y   +N L     L  AL V   M E+G E +
Sbjct: 89  LCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPD 148

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLV-------------------------------- 197
           +V Y I+I+G  + G +  A EIW  +V                                
Sbjct: 149 IVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTV 208

Query: 198 --METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
             M   +  +   YN +ING C+ G  D+   +   M++N  E D  TY   ++  C   
Sbjct: 209 GAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDEL 268

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYN 314
            +E AE + ++M  SG+  D  +YN ++ G C+A ++ + + +    M  KG  +VVSYN
Sbjct: 269 LLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYN 328

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I+ L        A  ++E +  K    D  T  +LI    + G  N A ++L+++   
Sbjct: 329 TIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMT-- 386

Query: 375 GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVV 434
           G G L D       +D H CK                 K+  A  +F +M   G +P VV
Sbjct: 387 GLGLLPDRVLYTTIVD-HLCK---------------TGKMGMAHSVFCDMVESGITPDVV 430

Query: 435 SYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           SYN LINGLC+  R  EA    ++M   G  PD +T+ L+I GL   KK+ +A ++  Q 
Sbjct: 431 SYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQM 490

Query: 495 LQKGFTPDVTMYNILIHGLCS 515
           ++KGFT D  +   L++ + S
Sbjct: 491 MEKGFTLDGAVSETLVNAIHS 511



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
           + Y A I  + +AG I +  + ++ M +  C +  + YN  I  L+   + D A   ++ 
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGR 378
           +  +  + +S T+   I+GLCK        ++L +++  G                 E +
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
           L  A  +V  M + G + +  T   ++NG  +A + ++A+ +++ M RKG SP   +   
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           L+ GLC   +   AY      +    K     Y+ LING CQ+  ID A  +     + G
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             PD+  YN+L++  C    +E+A  L   M++    P++ +YN L+ GL K    DKA 
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +  + +E +   D++SYN  +K LC+ S    A++   +   +GI P  +T+ IL++A 
Sbjct: 310 MMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAF 369

Query: 619 MNNGAS 624
           +  G+S
Sbjct: 370 LREGSS 375


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 244/512 (47%), Gaps = 66/512 (12%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G    +++  +++  LV+ G L  AL  F        E NV  +NIL+ GF  + D+   
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDF--- 144

Query: 190 KEIWERLVMETS---VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            E+   L+ E     +  N  T+ V+++ LC     D+ +  ++ +  N+ E   FTY  
Sbjct: 145 -EVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTV 203

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            + GLCKA  VE A  V+ EM+  G   D + Y+++IDG  +AG++ E  +L ++M  +G
Sbjct: 204 LVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARG 263

Query: 307 ------------------------------------CLNVVSYNILIRGLLENGKVDEAI 330
                                                  V +Y+ ++ G +  GKV++A 
Sbjct: 264 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAF 323

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
           ++ E + +++C  D+ ++ + I  L   G   +A ++   + E G               
Sbjct: 324 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 383

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG +A A  ++  MDK   K N Y    +M+GF+++S+LE A+ L++ + + G  P+ 
Sbjct: 384 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 443

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKG--WKPDMITYSLLINGLCQSKKIDMALKLC 491
           V+YNT+IN LCK+++  EA   ++EM  +    +P ++TYS++I+GL +    + A  L 
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 503

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + +  G  PD   Y  LI  L  AGKV  A++L   M K    P+  TY TL+  L ++
Sbjct: 504 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 563

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            D D A ++   ++     P+  ++    KG 
Sbjct: 564 -DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 215/442 (48%), Gaps = 23/442 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC +R  +KA  + NS+     +P +++Y  +++GL K+  +  A  VF+EM  +G + +
Sbjct: 173 LCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPD 232

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           ++ Y+ LIDG  K G    A+++ + L++     P  V Y  ++ GLCKCGR  E ++  
Sbjct: 233 IIAYSSLIDGLSKAGRVDEARKLVD-LMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 291

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++        TY   + G    G VE A  V  EM +     D ++Y   I+     
Sbjct: 292 QEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSI 351

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+ +E  +++E M  KGC  ++ +Y I+I    + G +  A  +  L+ +     +   +
Sbjct: 352 GRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIY 411

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++++G  K+  L +A++                  L  R+ K G   +  T N+++N  
Sbjct: 412 TMIMDGFVKSSRLEEALE------------------LYQRILKDGILPSTVTYNTVINAL 453

Query: 409 IQASKLENAIFLFKEMSRKG--CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            +  K++ A+ L +EM R+     P++V+Y+ +I+GL KV     A+  + EM++ G  P
Sbjct: 454 CKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP 513

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           D  TY+ LI  L  + K+  A++L  + L+ G  PD   Y  L+  LC +  V+ A  L 
Sbjct: 514 DCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLL 572

Query: 527 SNMKKRNCVPNLVTYNTLMDGL 548
             M +    PN  T+  +  G 
Sbjct: 573 QEMMRNGHTPNEFTFKAVEKGF 594



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 175/376 (46%), Gaps = 55/376 (14%)

Query: 278 TYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           T N+++    R G + +    ++    +   NV S+NIL+RG       +   ++   ++
Sbjct: 98  TRNSLLLALVRGGHLSDALGFFQSSISEP--NVSSFNILLRGFAARDDFEVVNALLREMK 155

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            +   ++  THGV+++ LC    L+KA+   N V                    + C+  
Sbjct: 156 SRGITSNGATHGVILSALCARRDLDKAVSYFNSV------------------SPNKCEPT 197

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +T   L++G  +A K+E A  +F+EM RKG  P +++Y++LI+GL K  R  EA   V 
Sbjct: 198 LFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVD 257

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
            M+ +G  P  + Y+ ++ GLC+  +I  A+K   +  ++   P V  Y+ ++ G    G
Sbjct: 258 LMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 317

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           KVE A  +   M  R+C P+ ++Y   ++ L+  G  ++A +++  ++E+  +PD+ +Y 
Sbjct: 318 KVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 377

Query: 578 ITLKGLC-----------------------------------SCSRMSDAFEFLNDALCR 602
           I +   C                                     SR+ +A E     L  
Sbjct: 378 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD 437

Query: 603 GILPTTITWHILVRAV 618
           GILP+T+T++ ++ A+
Sbjct: 438 GILPSTVTYNTVINAL 453



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 190/421 (45%), Gaps = 24/421 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
            + T N ++  L + G   + L  +   + +  E +  ++   + G     + E    + 
Sbjct: 95  TLFTRNSLLLALVRGGHLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVVNALL 151

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           REM   GI  +  T+  ++   C    + +    +  +    C   + +Y +L+ GL + 
Sbjct: 152 REMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKA 211

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            KV+ A  ++E +  K    D   +  LI+GL K                   GR+ +A 
Sbjct: 212 HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK------------------AGRVDEAR 253

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            LV+ M   G    A    S++ G  +  +++ A+   +EM R+   P V +Y+ ++ G 
Sbjct: 254 KLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 313

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
             + +  +A++ ++EM ++   PD I+Y++ I  L    + + A K+    ++KG  PD+
Sbjct: 314 IGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 373

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             Y I+I   C  G +  A  +   M K    PN   Y  +MDG  K+   ++ALE++  
Sbjct: 374 HTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQR 433

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG--ILPTTITWHILVRAVMNN 621
           IL++ + P  ++YN  +  LC   +M +A E L +   R   + P+ +T+ +++  +   
Sbjct: 434 ILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKV 493

Query: 622 G 622
           G
Sbjct: 494 G 494


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 293/624 (46%), Gaps = 68/624 (10%)

Query: 66  IQKCYCPEDVALS-----VIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LCR 112
           + +C CPE          +I  Y +   PD  L VF R+       ++F   A I    +
Sbjct: 177 MDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSK 236

Query: 113 KRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC 172
           + + +KA      + E+G+ P+V +Y ++INGL K+ ++  A  V  +M   GV  N + 
Sbjct: 237 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMT 296

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           YN LI G+   G +  +  +++ +   + + P+V   N  +  LCK GR  E  +++D M
Sbjct: 297 YNCLIHGYSTSGMWKESVRVFKEMS-SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                + D  +Y + +HG   AG + G + ++  MV  G+  D   +N +I+ + R G +
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI---------------SIWELL 336
            +   ++E M ++G   ++++++ +I      G++D+A+               +++  L
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475

Query: 337 REKNCN-----------ADSTTHGV----------LINGLCKNGYLNKAIQILNEVEEGG 375
            +  CN           +D  + G+          +IN LCK G + +   +++ +   G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 376 E-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
           +                 G + +A  L++ M+  G + + YT N+L++G+ +  ++++A+
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            LF++M  K  + T VSYN +++GL +  R   A     EM+E G    + TY+ ++ GL
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655

Query: 479 CQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNL 538
           C++   D A  L  +        D+  +NI+I  +   G+ ++A +L++ +     VP +
Sbjct: 656 CRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTI 715

Query: 539 VTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLND 598
           +TY  ++  L K    + A  +++ + +    PD    N  ++ L +   ++ A  +L+ 
Sbjct: 716 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 775

Query: 599 ALCRGILPTTITWHILVRAVMNNG 622
              +GILP   T  +L+     NG
Sbjct: 776 IDKKGILPEATTTSLLIYLFSVNG 799



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 230/497 (46%), Gaps = 70/497 (14%)

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC-------LEMWDRMKK---NERE 238
           A+ +++ L++           N +++ L +      C       +E++ RM +    E  
Sbjct: 127 ARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAA 186

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
              +TY   I+   +A   +    V+  ++ +G+  D  +YNA+IDGF + G++ +  +L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +  M  +G + NVV+Y+ LI GL +  ++D+A  +   +       ++ T+  LI+G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 358 NGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCK----- 395
           +G   +++++  E+                      GR+ +A  + + M   G K     
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 396 --------------------LNAYTC----------NSLMNGFIQASKLENAIFLFKEMS 425
                                N   C          N+L+N + +   ++ ++ +F++M+
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++G +P +++++T+I+  C++ R  +A      M++ G  PD   YS LI G C  + + 
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 486 MALKLCCQFLQKGFTPD-VTMYNILIHGLCSAGKV---EDALQLYSNMKKRNCVPNLVTY 541
            A +L    L KG  P  +  +  +I+ LC  G+V   +D + L  +  +R   PNL+T+
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR---PNLITF 543

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N+L+DG    G+  +A+ + + +    + PDI +YN  + G C   R+ DA     D L 
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 603

Query: 602 RGILPTTITWHILVRAV 618
           + +  T+++++I++  +
Sbjct: 604 KRVTLTSVSYNIILHGL 620



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/598 (21%), Positives = 265/598 (44%), Gaps = 82/598 (13%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---- 78
           AL D  ++E     +  LF+ +  + I P +V + S I  L + ++    E V       
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288

Query: 79  -----------VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKA 119
                      +I  Y  + M  +++ VF+ M+      ++  C + +  LC+  + ++A
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           +   +S+  KG KPDV SYG +++G   +G + G   +F+ M   GV  +   +N LI+ 
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 408

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + + G   ++  ++E +  +  V P+++T++ +I+  C+ GR D+ +E ++ M       
Sbjct: 409 YARLGMMDKSLLMFEDMTKQ-GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 467

Query: 240 DSFTYCSFIHG------------------------------------LCKAGNVEGAERV 263
           D+  Y   I G                                    LCK G V   + V
Sbjct: 468 DTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDV 527

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              ++ +G   + +T+N+++DG+C  G +KE   L + M   G   ++ +YN L+ G  +
Sbjct: 528 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 587

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
           +G++D+A++++  +  K     S ++ ++++GL +      A ++ +E+ E G       
Sbjct: 588 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 647

Query: 376 ---------EGRLADAAS-LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                         D A+ L+ ++     K +  T N ++    +  + + A  LF  +S
Sbjct: 648 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 707

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  PT+++Y  +I  L K E F +A +    M +    PD    + +I  L    ++ 
Sbjct: 708 TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVA 767

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL----YSNMKKRNCVPNLV 539
            A     +  +KG  P+ T  ++LI+     GK  + ++L    Y  ++++  V N +
Sbjct: 768 KAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAVDNCI 825



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 29/352 (8%)

Query: 280 NAMIDGFCRAGKIKEC-------FELWEVMGRKGCL----NVVSYNILIRGLLENGKVDE 328
           N ++    RA     C        EL++ M R  C      + +YNILI       + D 
Sbjct: 148 NELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDL 207

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
            + ++  L       D  ++  LI+G  K G ++KA                    L  +
Sbjct: 208 GLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA------------------HDLFYK 249

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M++ G   N  T +SL+NG  +  +++ A  + ++M   G  P  ++YN LI+G      
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           + E+    KEM      PD+   +  +  LC+  +I  A  +    + KG  PDV  Y  
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 369

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+HG  +AG +     L++ M     VP+   +NTL++   + G  DK+L ++  + ++ 
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           + PDII+++  +   C   R+ DA E  N  +  G+ P T  +  L++   N
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 199/376 (52%), Gaps = 23/376 (6%)

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFT-YCSFIHGLCKAGNVEGAERVYRE 266
           TY V++   C  G     +++   M++      + + Y  F+H LCK+G V  A  V + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 267 MVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGK 325
           M +     D VT+N +I G C+AG++ E  ++ + M R G   N+V+YN LI GL   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 326 VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASL 385
             EA+ + + +       D+ T+  +I+G CK+G +++A   L E+++            
Sbjct: 140 SGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQ------------ 184

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLC 444
                + GC  + +T + L+NG  ++S L  A  L +EM  RK C  +VV++NTL++G C
Sbjct: 185 -----RAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC 239

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           K +    A   +  MLE G  PD++TYS +I+GLC+   +D    L  + + +G  PDV 
Sbjct: 240 KAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVV 299

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            Y +L+ GLC AGK+ +A +L   M +  C PN VTY+ + DGL K    D A ++   I
Sbjct: 300 TYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359

Query: 565 LEERLRPDIISYNITL 580
            ++    D++++   L
Sbjct: 360 RDKGRITDVVAFEALL 375



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 206/374 (55%), Gaps = 20/374 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y +L+      G+   A ++   +  +  + P    YN  ++ LCK G+  E +E+   M
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
           K    + D  T+ + I GLCKAG ++ A++V  EM  SG   + VTYN +I+G   AG+ 
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 293 KECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK-NCNADSTTHGVL 351
            E   + +  G     +  +YN +I G  ++G++D A    E ++++  C+ D+ T+ +L
Sbjct: 141 GEAVLVMQ--GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           INGLCK+  L KA ++L E              ++ R D   C  +    N+L++G+ +A
Sbjct: 199 INGLCKSSNLRKADELLQE--------------MIGRKD---CCASVVAFNTLVDGYCKA 241

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             L+ A  L   M   GC+P VV+Y+T+I+GLC+     + ++ +++M+ +G KPD++TY
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           ++L+ GLC++ K+  A +L  + L+ G TP+   Y+++  GLC   K++ A  L ++++ 
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361

Query: 532 RNCVPNLVTYNTLM 545
           +  + ++V +  L+
Sbjct: 362 KGRITDVVAFEALL 375



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 18/362 (4%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVS--YNILIRGLLENGKVDEAISI 332
           D  TY  ++   C AG+++   +L   M ++  +      YN  +  L ++GKV EA+ +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-EGRLADAASLVNRMDK 391
            + +++  C  D  T   LI GLCK G L++A Q+L+E+E  G    L    +L+N +  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 392 HG-------------CKLNAYTCNSLMNGFIQASKLENAIFLFKEM-SRKGCSPTVVSYN 437
            G                +  T N++++GF ++ +++ A    +EM  R GCSP   +Y+
Sbjct: 137 AGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 438 TLINGLCKVERFGEAYSFVKEML-EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
            LINGLCK     +A   ++EM+  K     ++ ++ L++G C+++ +D A +L    L+
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  PDV  Y+ +I GLC  G V+    L   M  R C P++VTY  L+ GL K G   +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A  +   +LE+   P+ ++Y++   GLC   ++  A + L     +G +   + +  L+ 
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLL 376

Query: 617 AV 618
           +V
Sbjct: 377 SV 378



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 23/299 (7%)

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------------EGRLADAASL 385
           D+ T+ VL+   C  G L  A+ +L E+E+                     G++ +A  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 386 VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
           V  M    CK +  T N+L+ G  +A +L+ A  +  EM R G +  +V+YNTLINGL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 446 VERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK-GFTPDVT 504
             R GEA   ++ M      PD  TY+ +I+G C+S +ID A     +  Q+ G +PD  
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 505 MYNILIHGLCSAGKVEDALQLYSNM-KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            Y+ILI+GLC +  +  A +L   M  +++C  ++V +NTL+DG  K  D D+A E+ + 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +LE    PD+++Y+  + GLC C  +   F  L   + RG  P  +T+ +LV  +   G
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 19/334 (5%)

Query: 19  HTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVAL- 77
             A+ L     ++PG A +P +++  +  L     V     +++ ++   C  P+ V   
Sbjct: 35  QAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-PDVVTFN 93

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKG------- 130
           ++I    K    D+A  V   M       +G       +      L+S    G       
Sbjct: 94  TLIAGLCKAGRLDEAQQVLDEMER-----SGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148

Query: 131 ---LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER-GVETNVVCYNILIDGFFKKGDY 186
                PD  +Y  +I+G  KSG++  A    +EM +R G   +   Y+ILI+G  K  + 
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
            +A E+ + ++       +VV +N +++G CK    D   E+   M ++    D  TY +
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            I GLC+ G+V+    +  +MV  G   D VTY  ++ G C+AGK+ E   L + M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREK 339
           C  N V+Y+++  GL +  K+D A  +   +R+K
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 506 YNILIHGLCSAGKVEDALQLYSNMKKR-NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           Y +L+   C AG+++ A+ L   M+++    P    YN  +  L K+G   +A+E+  ++
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            +   +PD++++N  + GLC   R+ +A + L++    G     +T++ L+  + + G S
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 265/535 (49%), Gaps = 49/535 (9%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI------------ 64
           +P   L  F+ + RE    +S  L   +L  L + K    +  IL+              
Sbjct: 86  DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI 145

Query: 65  --EIQKC---YCPEDV-ALSVIQAYGKNSMPDKALDVFQRMNE------IFGCEA--GIL 110
              +  C   +C   + A  ++ AY +NS     L+ F+R  +      +  C      L
Sbjct: 146 FHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSAL 205

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
            ++ +F   +     +  + + P++ ++ TVINGL K G L  A  V D+M   G   NV
Sbjct: 206 VKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265

Query: 171 VCYNILIDGFFKKG---DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
           V YN LIDG+ K G      +A  I + +V E  V PN VT+NV+I+G CK       L+
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEMV-ENKVSPNSVTFNVLIDGFCKDENLSAALK 324

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           +++ M+    +    TY S ++GLC  G +  A+ +  EM+ S +  + +TYNA+I+G+C
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384

Query: 288 RAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           +   ++E  EL++ +G++G   NV+++N L+ G  + GK++EA  + +++ EK    +++
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS 444

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  LI G C+                  EG++ +  +L+N M   G K +  T N L++
Sbjct: 445 TYNCLIVGFCR------------------EGKMEEVKNLLNEMQCRGVKADTVTYNILIS 486

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
            + +  + + A  L  EM  KG  P+ ++YN L+NG C       A +  K+M ++G   
Sbjct: 487 AWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWA 546

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +++TY++LI G C+  K++ A  L  + L+KG  P+ T Y I+   +   G + D
Sbjct: 547 NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 220/422 (52%), Gaps = 22/422 (5%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           +V++ N +++ L K   F     ++  M + +   +  T+ + I+GLCK G +  A  V 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFE----LWEVMGRKGCLNVVSYNILIRGL 320
            +M   G + + VTYN +IDG+C+ G++ + ++    L E++  K   N V++N+LI G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            ++  +  A+ ++E ++ +       T+  L+NGLC                   EG+L 
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC------------------NEGKLN 355

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
           +A  L++ M     K N  T N+L+NG+ +   LE A  LF  + ++G +P V+++NTL+
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +G CK  +  EA+   K MLEKG+ P+  TY+ LI G C+  K++    L  +   +G  
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
            D   YNILI   C   + + A +L   M  +   P+ +TYN L++G    G+   AL +
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
              + +E    ++++YN+ ++G C   ++ DA   LN+ L +G++P   T+ I+   +M 
Sbjct: 536 RKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595

Query: 621 NG 622
            G
Sbjct: 596 KG 597



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 212/449 (47%), Gaps = 49/449 (10%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSV-IQ 81
            L  +  +E  +     ++  ++RR I P L+   + I  L ++ K     DV   + + 
Sbjct: 200 PLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVW 259

Query: 82  AYGKNSMPDKALDVFQRMNEIFG-CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGT 140
            +  N +    L        I G C+ G   R  +  KA   L  + E  + P+  ++  
Sbjct: 260 GFWPNVVTYNTL--------IDGYCKMG---RVGKMYKADAILKEMVENKVSPNSVTFNV 308

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMET 200
           +I+G  K  +L  AL VF+EM  +G++  VV YN L++G   +G    AK + + + + +
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM-LSS 367

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           ++ PNV+TYN +ING CK    +E  E++D + K     +  T+ + +HG CK G +E A
Sbjct: 368 NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRG 319
             + + M+E G   +A TYN +I GFCR GK++E   L   M  +G   + V+YNILI  
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISA 487

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
             E  +  +A  + + + +K       T+ +L+NG C                   EG L
Sbjct: 488 WCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM------------------EGNL 529

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
             A +L  +M+K G   N  T N L+ G+ +  KLE+A  L  EM  KG  P   +Y  +
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDM 468
                            +EM+EKG+ PD+
Sbjct: 590 ----------------KEEMMEKGFLPDI 602



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFV 456
           N+   + L+  +++ SK    +  FK         +V+S N L++ L K   FG      
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218

Query: 457 KEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA 516
           KEM+ +   P++IT                                   +N +I+GLC  
Sbjct: 219 KEMIRRKISPNLIT-----------------------------------FNTVINGLCKV 243

Query: 517 GKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD---KALEIWNHILEERLRPDI 573
           GK+  A  +  +MK     PN+VTYNTL+DG  K G      KA  I   ++E ++ P+ 
Sbjct: 244 GKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNS 303

Query: 574 ISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +++N+ + G C    +S A +   +   +G+ PT +T++ LV  + N G
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 248/477 (51%), Gaps = 20/477 (4%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           K + PD+ ++G +I+    +G L    A   ++ + G+  + V +  L+     K     
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNER--EKDSFTYCS 246
           A  I  R + E    P+V +Y+ ++ GLC   + +E  E+   M ++      D  +Y +
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
            IHG  K G+V  A  ++ +M++ GI  + VT N++IDG C+   + +   + + M  + 
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 307 CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
            + N  +YN LI G L +G+  EA+ I + +       +  T+ +LI+ LCK+G+  +A 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 366 QILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
           +I N + + G                 EG L +  ++ + M ++G + N +T +  +  +
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +  +L+ A   F +M + G  P +V+Y T+I+GLCK+ R  +A S   +M++ G  P++
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           IT++ LI+G     K + A +L  + + +G  PDVT++  +I  L   GKV +A +L+  
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           M +    PN+V+YNT++ G F  G+  + +++ + +L   L+P  +++N  L G+ S
Sbjct: 427 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS 483



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 226/477 (47%), Gaps = 47/477 (9%)

Query: 95  VFQRMNEIFGCEAGI---------LCRKRQFEKAKRFLNSLWEKG--LKPDVYSYGTVIN 143
           V +RM E+ GC   +         LC +++ E+A   ++ + E G    PDV SY TVI+
Sbjct: 71  VLRRMPEL-GCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G  K GD+  A  +F +M + G+  NVV  N +IDG  K     +A+ + ++++ E  + 
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-HIM 188

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           PN  TYN +I+G    G++ E + +   M ++ +  +  TY   I  LCK+G    A  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           +  M++SG   DA TY +++ G+   G + E   + ++M + G   N  +++I I    +
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++DEA   +  +++     D  T+  +I+GLCK G L+ A+    ++ + G       
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G+   A  L   M   G   +     ++++   +  K+  A  LF  M 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           R G  P VVSYNT+I+G       GE    + +ML  G KP  +T++ L++G+     + 
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM-----VS 483

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
           M LK           PDV     LI   C  G++ED L L+  M  +    + +T N
Sbjct: 484 MGLK-----------PDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 202/428 (47%), Gaps = 22/428 (5%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC-KAGNVEGA 260
           V P++ T+ ++I+  C  G  +       ++ K     D+  +   +  LC K    +  
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG---CLNVVSYNILI 317
             V R M E G   D  +Y+ ++ G C   K +E  EL  +M   G     +VVSY+ +I
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G  + G V +A +++  + +     +  T   +I+GLCK   ++KA  +L ++      
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM------ 182

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      +D+H    N  T NSL++G++ + +   A+ + KEMSR G  P VV+YN
Sbjct: 183 -----------IDEH-IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYN 230

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            LI+ LCK     EA      M++ G KPD  TY  L++G      +     +    +Q 
Sbjct: 231 MLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQN 290

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           G   +   ++I I+  C  G++++A   +  M++   +P++VTY T++DGL K G  D A
Sbjct: 291 GMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 350

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
           +  +  ++++ L P+II++   + G     +   A E   + + RGI P    +  ++  
Sbjct: 351 MSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDR 410

Query: 618 VMNNGAST 625
           +   G  T
Sbjct: 411 LFKEGKVT 418



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 50/520 (9%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHH--ILRRLIDPKLVVHVSR 59
            ++   LL  L A+K    A+ +     R P    +P +F +  +L+ L   K     + 
Sbjct: 48  AVAFTPLLRTLCAKKRTSDAMNIV--LRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAE 105

Query: 60  ILELIEIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNE------IFGCEAGI-- 109
           ++ ++      CP DV    +VI  + K     KA  +F +M +      +  C + I  
Sbjct: 106 LIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDG 165

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ +  +KA+  L  + ++ + P+  +Y ++I+G + SG    A+ +  EM   G   N
Sbjct: 166 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 225

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YN+LID   K G +  A+EI+  ++ ++   P+  TY  +++G    G   E   + 
Sbjct: 226 VVTYNMLIDCLCKSGFHAEAREIFNSMI-QSGPKPDATTYGSLLHGYATEGNLVEMNNVK 284

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M +N    +  T+   I+  CK G ++ A   + +M + G   D VTY  +IDG C+ 
Sbjct: 285 DLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKI 344

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G++ +    +  M   G   N++++  LI G    GK ++A  ++  + ++    D T  
Sbjct: 345 GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIF 404

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             +I+ L K                  EG++ +A  L + M + G K N  + N++++G+
Sbjct: 405 TAMIDRLFK------------------EGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGY 446

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
             A ++   + L  +M   G  PT V++NTL++G                M+  G KPD+
Sbjct: 447 FIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDV 490

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
            T   LI+  C+  +I+  L L  + L K    D    NI
Sbjct: 491 DTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 247/534 (46%), Gaps = 69/534 (12%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNI 175
           F K KRF        + P   S   +++   K G   G    F +M   G +  V  YNI
Sbjct: 86  FSKMKRFR-------VFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNI 138

Query: 176 LIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKN 235
           +ID  +K+GD   A+ ++E +     + P+ VTYN MI+G  K GR D+ +  ++ MK  
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFR-GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197

Query: 236 EREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC 295
             E D  TY S I+  CK+G +      YREM +SG+  + V+Y+ ++D FC+   +++ 
Sbjct: 198 SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 296 FELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLING 354
            + +  M R G + N  +Y  L+    + G + +A  +   + E     +  T+  LI+G
Sbjct: 258 IKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317

Query: 355 LCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKL 414
           LC                     R+ +A  L  +M   G   N  + N+L++GF++A  +
Sbjct: 318 LCD------------------AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD------- 467
           + A+ L  E+  +G  P ++ Y T I GLC +E+   A   + EM E G K +       
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419

Query: 468 ----------------------------MITYSLLINGLCQ----SKKIDMALKLCCQFL 495
                                       ++T+ +LI+GLC+    SK ID   ++   F 
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDF- 478

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
             G  P+  +Y  +I GLC   +V+ A  L+  M +   VP+   Y +LMDG  K G+  
Sbjct: 479 --GLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNML 536

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +AL + + + E  ++ D+++Y   + G   C+++  A  FL + +   ILP  +
Sbjct: 537 EALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 228/477 (47%), Gaps = 20/477 (4%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++   E A+     +  +GL PD  +Y ++I+G  K G L   +  F+EM     E +V+
Sbjct: 145 KEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LI+ F K G   +  E + R + ++ + PNVV+Y+ +++  CK     + ++ +  
Sbjct: 205 TYNSLINCFCKSGKLPKGLEFY-REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVD 263

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M++     + FTY S +   CK GN+  A R+  EM+E G+  + VTY A+IDG C A +
Sbjct: 264 MRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAER 323

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +KE  +L+  M   G + N+ SYN LI G ++   +D A+ +   L+ +    D   +G 
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383

Query: 351 LINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHG 393
            I GLC    +  A  ++NE++E G                  G   +   L+  M +  
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEA 452
            ++   T   L++G  +   +  AI  F  MS   G  P    Y  +I+GLCK  +   A
Sbjct: 444 HEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAA 503

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
            +  ++M ++G  PD   Y+ L++G  +   +  AL L  +  + G   D+  Y  L+ G
Sbjct: 504 TTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWG 563

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
                +++ A      M     +P+ V    ++   ++ G  D+A+ + +++++ +L
Sbjct: 564 FSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQL 620



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 199/411 (48%), Gaps = 18/411 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P    ++ + + L   G  +E  + + +MK+      + +    +H   K G  +G +R 
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           +++M+ +G      TYN MID   + G I+    L+E M  +G + + V+YN +I G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
            G++D+ +  +E ++  +C  D  T+  LIN  CK+G L K ++   E+++ G       
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 376 ----------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                     E  +  A      M + G   N +T  SL++   +   L +A  L  EM 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G    VV+Y  LI+GLC  ER  EA     +M+  G  P++ +Y+ LI+G  ++K +D
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            AL+L  +   +G  PD+ +Y   I GLC   K+E A  + + M++     N + Y TLM
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFL 596
           D  FK+G+  + L +   + E      ++++ + + GLC    +S A ++ 
Sbjct: 421 DAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYF 471



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 230/512 (44%), Gaps = 30/512 (5%)

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVC------YNILIDGFFKKGDYMRA 189
           Y   +++  +V S   L    VFDE++     T  VC      ++ L       G    A
Sbjct: 27  YDANSILREIVLSKAELEECDVFDELWS----TRNVCVPGFGVFDALFSVLIDLGMLEEA 82

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            + + ++     V+P   + N +++   K G+ D     +  M     +   FTY   I 
Sbjct: 83  TQCFSKM-KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMID 141

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            + K G++E A  ++ EM   G+  D VTYN+MIDG+ + G++ +    +E M    C  
Sbjct: 142 CMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP 201

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           +V++YN LI    ++GK+ + +  +  +++     +  ++  L++  CK   + +AI+  
Sbjct: 202 DVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFY 261

Query: 369 NEVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
            ++   G                  G L+DA  L N M + G + N  T  +L++G   A
Sbjct: 262 VDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDA 321

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            +++ A  LF +M   G  P + SYN LI+G  K +    A   + E+  +G +PD++ Y
Sbjct: 322 ERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLY 381

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
              I GLC  +KI+ A  +  +  + G   +  +Y  L+     +G   + L L   M++
Sbjct: 382 GTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQE 441

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMS 590
            +    +VT+  L+DGL K     KA++ +  +  +  L+P+   Y   + GLC  +++ 
Sbjct: 442 LDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVK 501

Query: 591 DAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            A          G++P    +  L+   +  G
Sbjct: 502 AATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 184/378 (48%), Gaps = 23/378 (6%)

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK---IKECFELWEVMGRKGC 307
           L   G +E A + + +M    +F    + N ++  F + GK   +K  F+  +++G    
Sbjct: 73  LIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK--DMIGAGSK 130

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
             V +YNI+I  + + G ++ A  ++E ++ +    D+ T+  +I+G             
Sbjct: 131 PTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY------------ 178

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
                 G  GRL D       M    C+ +  T NSL+N F ++ KL   +  ++EM + 
Sbjct: 179 ------GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P VVSY+TL++  CK +   +A  F  +M   G  P+  TY+ L++  C+   +  A
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDA 292

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  + L+ G   +V  Y  LI GLC A ++++A +L+  M     +PNL +YN L+ G
Sbjct: 293 FRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             K  + D+ALE+ N +    ++PD++ Y   + GLC   ++  A   +N+    GI   
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412

Query: 608 TITWHILVRAVMNNGAST 625
           T+ +  L+ A   +G  T
Sbjct: 413 TLIYTTLMDAYFKSGNPT 430



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 199/417 (47%), Gaps = 31/417 (7%)

Query: 65  EIQKCYCPEDVAL--SVIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKR 114
           E++   C  DV    S+I  + K+    K L+ ++ M +         +       C++ 
Sbjct: 193 EMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKED 252

Query: 115 QFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYN 174
             ++A +F   +   G  P+ ++Y ++++   K G+L  A  + +EM E GVE NVV Y 
Sbjct: 253 MMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYT 312

Query: 175 ILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
            LIDG         A++++ ++V    V PN+ +YN +I+G  K    D  LE+ + +K 
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVT-AGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 371

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
              + D   Y +FI GLC    +E A+ V  EM E+GI  + + Y  ++D + ++G   E
Sbjct: 372 RGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTE 431

Query: 295 CFELWEVMGR-KGCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADSTTHGVLI 352
              L E M      + VV++ +LI GL +N  V +AI  +  +  +     ++  +  +I
Sbjct: 432 GLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMI 491

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           +GLCK                  E ++  A +L  +M + G   +     SLM+G ++  
Sbjct: 492 DGLCK------------------ENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
            +  A+ L  +M+  G    +++Y +L+ G  +  +  +A SF++EM+ +   PD +
Sbjct: 534 NMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 23/285 (8%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  + K    D+AL++   +          ++G     LC   + E AK  +N + E 
Sbjct: 348 ALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQEN 407

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+K +   Y T+++   KSG+    L + +EM E   E  VV + +LIDG  K     +A
Sbjct: 408 GIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKA 467

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            + + R+  +  + PN   Y  MI+GLCK  +      ++++M +     D   Y S + 
Sbjct: 468 IDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMD 527

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCL 308
           G  K GN+  A  +  +M E G+ +D + Y +++ GF +  ++++    L E++G +   
Sbjct: 528 GNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEE--- 584

Query: 309 NVVSYNILIRGLL----ENGKVDEAISIW------ELLREKNCNA 343
            ++   +L  G+L    E G +DEA+ +       +LL   N NA
Sbjct: 585 -ILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNA 628


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 243/490 (49%), Gaps = 23/490 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R R F   +   + +  + L+    +Y T+IN    +GD+  A      +   G+  +
Sbjct: 51  LARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPD 106

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y   + G+ + G    A  ++  + +   +     TY  +++GL   G   E + ++
Sbjct: 107 SYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMTVF 165

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+ +    D+  Y + +HGLC+AG  E AE +  E + +G   + V YNA+IDG+C A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++   +++E M G +   NV +Y  LI GL ++GKV+ A+ ++  + E     +  T+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G C  G+L  A ++L+ +E  G                   ++ +A   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K+N     SL++G  +  K++ A  L ++M  +G  P   SY++LI+GLC+ ++  +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   +++M+EKG +   +TY+++I+ L +    +   K+  + +  G  PD+  Y + + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++EDA  +   M  R   PNLVTYNTL+ G    G   +A   +  ++ +  +P
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 572 DIISYNITLK 581
           +  SY + L+
Sbjct: 526 NEDSYTVLLR 535



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 230/487 (47%), Gaps = 59/487 (12%)

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSFI 248
           + +  R++  ++  P +   N ++  L +   F +   +  RM  +N R     TY + I
Sbjct: 25  RRLSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR-----TYTTLI 79

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +  C AG++  A++    ++ +G+  D+  Y + + G+CRAG +     ++ +M  +GCL
Sbjct: 80  NAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCL 139

Query: 309 NVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY------- 360
               +Y  L+ GLL  G V EA++++  +R  +C  D+  +  +++GLC+ G        
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVL 199

Query: 361 --------LNKAIQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
                       I + N + +G    G +  A  +   MD + C  N  T   L++G  +
Sbjct: 200 LEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCK 259

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLING---------------------------- 442
           + K+E A+ LF  M   G  P VV+Y  LI G                            
Sbjct: 260 SGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWT 319

Query: 443 -------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                  LCK E+  EA  F+  +++KG K + + Y+ LI+GLC++ KID A +L  + +
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +GF PD   Y+ LI GLC   K+  A  +  +M ++    + VTY  ++D L +    +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              +I++ ++   + PDI++Y + ++  C   RM DA   +   + RG+ P  +T++ L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 616 RAVMNNG 622
           R   N G
Sbjct: 500 RGYANLG 506



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 243/558 (43%), Gaps = 72/558 (12%)

Query: 86  NSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           + MP + L  +  +   + C AG          AK+ L SL   GL PD Y+Y + + G 
Sbjct: 65  SRMPARNLRTYTTLINAY-CLAG------DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGY 117

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW-----ERLVMET 200
            ++G L  A  VF  M  RG       Y  L+ G    G    A  ++     +    +T
Sbjct: 118 CRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDT 177

Query: 201 SVY-----------------------------PNVVTYNVMINGLCKCGRFDECLEMWDR 231
            VY                             PN+V YN +I+G C  G  +  L++++ 
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEG 237

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  N    +  TY   IHGLCK+G VE A  ++  MVE+G+  + VTY A+I G C  G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++  F L  +M   G + N  ++++LI  L +  KV+EA      L +K    +   +  
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK G ++ A +                  L+ +M   G   +A++ +SL++G  +
Sbjct: 358 LIDGLCKTGKIDAADE------------------LMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             KL  A  + ++M  KG   + V+Y  +I+ L +            +M+  G  PD++T
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++ +   C+  +++ A  +  Q + +G  P++  YN LI G  + G V  A   +  M 
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN------------HILEERLRPDIISYNI 578
            +   PN  +Y  L+  + K    D +++IW              I E +L      Y+ 
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC 579

Query: 579 TLKGLCSCSRMSDAFEFL 596
            ++ LC   R+ +A  F 
Sbjct: 580 FIRCLCRVDRLEEAKHFF 597



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 230/515 (44%), Gaps = 40/515 (7%)

Query: 53  LVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFG 104
           ++ H  R+  L+ ++ C        +++       M  +A+ VF  M          ++ 
Sbjct: 122 MLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYA 181

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC   + E+A+  L      G +P++  Y  +I+G   +G++  AL VF+ M   
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
               NV  Y  LI G  K G   RA  ++ R+V E  + PNVVTY  +I G C  G    
Sbjct: 242 RCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +   M+ N    + +T+   I  LCK   VE A+     +V+ G+ V+ V Y ++ID
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+ GKI    EL + M  +G + +  SY+ LI GL    K+ +A  + E + EK   A
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
              T+ ++I+ L +              E G EG       + ++M   G   +  T   
Sbjct: 421 SPVTYTIIIDELVR--------------EVGSEG----PKKIFDKMIATGINPDIVTYTV 462

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            +  + +  ++E+A  +  +M  +G  P +V+YNTLI G   +    +A+S  + M+ KG
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 464 WKPDMITYSLLINGLCQSKKIDMALK------------LCCQFLQKGFTPDVTMYNILIH 511
           WKP+  +Y++L+  + +    D ++             L     ++       +Y+  I 
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
            LC   ++E+A   +  M+  N  P+   Y +++D
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 177/646 (27%), Positives = 293/646 (45%), Gaps = 82/646 (12%)

Query: 58  SRILELIEIQKC--YCPEDVALS-VIQAYGKNSMPDKALDVFQR-------MNEIFGCEA 107
           S +  L++I K     P   A S VI  +    + D+AL+ ++        + ++F C +
Sbjct: 83  SEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNS 142

Query: 108 --GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG 165
              +L +  + E A +  + + ++  + D Y+   ++ GL K G +     + ++ + RG
Sbjct: 143 LLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRG 202

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
              N+V YN LIDG+ KKGD  RA  +++ L M+    P V TY  +ING CK G+F+  
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK-GFLPTVKTYGAIINGFCKKGKFEVV 261

Query: 226 ----LEMWDR-------------------------------MKKNEREKDSFTYCSFIHG 250
               +EM +R                               M K+  + D  TY   I G
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
            C  G V  AE++  + ++ G+  + V+Y  +I  +C+ G+     +L   M  +G   +
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           +V+Y  LI GL+  G+VD A+++   + EK    D+  + VL++GLCK G L  A  +L 
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLA 441

Query: 370 EVEEGGEGRLADA---ASLVNRMDKHG-----CKLNAYTC-----------NSLMNGFIQ 410
           E+ +  +    DA   A+LV+   +HG      KL   T            N+++ G+ +
Sbjct: 442 EMLD--QNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              +++A+  FK M +   SP   +Y+T+I+G  K+     A      M++   KP+++T
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+LLING C S  I+ A K   Q L     P+V  Y ILI   C    +  A   +  M 
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQML 619

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDC------------DKALEIWNHILEERLRPDIISYNI 578
              C+PN VTYN LM+GL    D                LE +  ++ +       SYN 
Sbjct: 620 MEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNS 679

Query: 579 TLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAS 624
            L  LC    +  A    +  + +G LP  ++   L+  +   G S
Sbjct: 680 ILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRS 725



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 241/563 (42%), Gaps = 74/563 (13%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMN--------EIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  Y K    ++A  +F+ +         + +G      C+K +FE   + L  + E+
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           GL   ++ Y  +I+   K G  + A      M + G + ++  YNILI G    G+  +A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +++ E+ + +  + PN V+Y  +I+  CK G +   L++  +M +   + D  TY + IH
Sbjct: 332 EQLLEQAI-KRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIH 390

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKEC-FELWEVMGRKGCL 308
           GL  AG V+ A  V  +MVE G+  DA  YN ++ G C+ G++      L E++ +    
Sbjct: 391 GLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAP 450

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA---- 364
           +      L+ G + +G  +EA  ++EL  EK  +     +  +I G CK G +  A    
Sbjct: 451 DAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCF 510

Query: 365 ---IQILNEVEEGGEGRLAD----------AASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
              IQ L+  +E     + D          A  +   M K  CK N  T   L+NGF  +
Sbjct: 511 KRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLS 570

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A   FK+M      P VV+Y  LI   CK     +A SF ++ML +   P+ +TY
Sbjct: 571 GDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTY 630

Query: 472 SLLINGL-----------------------------------------------CQSKKI 484
           + L+NGL                                               CQ K +
Sbjct: 631 NYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMV 690

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
             AL L  + + KGF PD      L+HGLC  G+ +D   + S       +   V Y+  
Sbjct: 691 KHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEK 750

Query: 545 MDGLFKTGDCDKALEIWNHILEE 567
           +D     G   +A  I + + ++
Sbjct: 751 LDAFLSQGQTSEASLILHSLADQ 773


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 212/409 (51%), Gaps = 20/409 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G++ D+Y++  VIN       +  AL+V  +M + G E + V    L++GF ++     A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
             + +++V E    P++V YN +I+ LCK  R ++ L+ +  + +     +  TY + ++
Sbjct: 175 VSLVDKMV-EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
           GLC +G    A R+ R+M++  I  + +TY+A++D F + GK+ E  E++E M R     
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           ++V+Y+ LI GL  + ++DEA  +++L+  K C  D  ++  LING CK           
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCK----------- 342

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R+ D   L  +M + G   N  T N+L+ GF Q   ++ A   F +M   G
Sbjct: 343 -------AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG 395

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
            SP + +YN L+ GLC      +A    ++M +     D++TY+ +I G+C++ K++ A 
Sbjct: 396 VSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAW 455

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            L C    KG  PD+  Y  ++ GLC+ G   +   LY+ MK+   + N
Sbjct: 456 GLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 222/429 (51%), Gaps = 19/429 (4%)

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           R +++T  +P++V +N +++ + K  ++D  + +  +M+      D +T+   I+  C  
Sbjct: 74  REMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             V  A  V  +M++ G   D VT  ++++GFCR  ++ +   L + M   G   ++V+Y
Sbjct: 134 FQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAY 193

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
           N +I  L +  +V++A+  ++ +  K    +  T+  L+NGLC +G  N           
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN----------- 242

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
                  DAA L+  M K     N  T ++L++ F++  K+  A  +F+EM R    P +
Sbjct: 243 -------DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V+Y++LINGLC  +R  EA      M+ KG  PD+++Y+ LING C++K+++  +KL  +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             Q+G   +   YN LI G    G V+ A + +S M      P++ TYN L+ GL   G 
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            +KAL I+  + +  +  DI++Y   ++G+C   ++ DA+        +G+ P  +T+  
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTT 475

Query: 614 LVRAVMNNG 622
           ++  +   G
Sbjct: 476 MMSGLCTKG 484



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 251/535 (46%), Gaps = 51/535 (9%)

Query: 30  REPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMP 89
           R+     + +LF  +++    P  +V  +R+L  I   K Y   DV +S+          
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPS-IVDFNRLLSAIVKMKKY---DVVISL---------- 107

Query: 90  DKALDVFQRMNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
            K ++V    N+++     I   C   Q   A   L  + + G +PD  + G+++NG  +
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
              +  A+++ D+M E G   ++V YN +ID   K      A + ++  +    + PNVV
Sbjct: 168 RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKE-IGRKGIRPNVV 226

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
           TY  ++NGLC  GR+++   +   M K +   +  TY + +    K G V  A+ ++ EM
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKV 326
           V   I  D VTY+++I+G C   +I E  +++++M  KGC  +VVSYN LI G  +  +V
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           ++ + ++  + ++    ++ T+  LI G  + G ++KA +  ++                
Sbjct: 347 EDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ---------------- 390

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
             MD  G   + +T N L+ G      LE A+ +F++M +      +V+Y T+I G+CK 
Sbjct: 391 --MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  +A+     +  KG KPD++TY+ +++GLC          L  +  Q+G   + +M 
Sbjct: 449 GKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSM- 507

Query: 507 NILIHGLC-SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
                 LC   G +  + +L   M      P+L+       G  K   C KAL +
Sbjct: 508 ------LCLGDGDITISAELIKKMLSCGYAPSLL-------GDIKPVGCKKALSL 549



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 119/210 (56%)

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
           KL +AI LF+EM +    P++V +N L++ + K++++    S  K+M   G + D+ T++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           ++IN  C   ++ +AL +  + L+ G+ PD      L++G C   +V DA+ L   M + 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
              P++V YN ++D L KT   + AL+ +  I  + +RP++++Y   + GLC+  R +DA
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 593 FEFLNDALCRGILPTTITWHILVRAVMNNG 622
              L D + R I P  IT+  L+ A + NG
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNG 274


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 253/530 (47%), Gaps = 29/530 (5%)

Query: 98  RMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAV 157
           R  E FG       R  +   A R L  + + G++PD+    T I+ LV    L  A+  
Sbjct: 230 RRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 158 FDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV---YPNVVTYNVMIN 214
            + M    +E NV+ YN LI G+    D  R ++  E L+ E       P+ ++Y  ++ 
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGY---CDLHRLEDAME-LIAEMPFKGCSPDKISYYTVMG 345

Query: 215 GLCKCGRFDECLEMWDRMKKNERE-KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIF 273
            LCK  R  E   + ++M K+     D  TY +F+H L K G+ + A    RE  E    
Sbjct: 346 FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFR 405

Query: 274 VDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISI 332
           VD V Y+A++  FCR G++ +  E+   M  KGC+ +VV+Y  +I GL +  KVD+A  +
Sbjct: 406 VDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 465

Query: 333 WELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKH 392
              + +  C  ++ ++  L+NGLCKNG   +A +++N  EE                   
Sbjct: 466 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW----------------- 508

Query: 393 GCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEA 452
               NA T + LM+GF +  K   A  L +EM +KG  PT V  N LI  LC+ E+  EA
Sbjct: 509 -WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA 567

Query: 453 YSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
             F+++ L  G   +++ ++ +I+G CQ   ++ AL L          PDV  Y  +I  
Sbjct: 568 KRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDA 627

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
           L   G++E+A +L   M +   +P  VTY T++    + G  +  L++   +L    +  
Sbjct: 628 LGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QEC 685

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             +YN  ++ LCS   +  A++ L   L         T H+L+ + ++ G
Sbjct: 686 RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 735



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 271/605 (44%), Gaps = 52/605 (8%)

Query: 3   ISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILE 62
           +  +++  +L+ + +   AL  F  A R+  Y H P     I R      ++V  SR  +
Sbjct: 193 LKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDP-----IRRPEAFGYVMVSYSRAGK 247

Query: 63  LIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI--LCRKRQFEKAK 120
           L    +        L+++Q  G    PD ++           C   I  L    + +KA 
Sbjct: 248 LRNAMR-------VLTMMQKAGIE--PDLSI-----------CNTAIHVLVMGNRLDKAV 287

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           RFL  +    ++P+V +Y  +I G      L  A+ +  EM  +G   + + Y  ++   
Sbjct: 288 RFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFL 347

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            K+      + + E+++ ++++ P+ VTYN  ++ L K G  DE LE     ++     D
Sbjct: 348 CKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 407

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
              Y + +H  C+ G ++ A+ +  EM   G   D VTY ++I+G C+  K+ +  ++  
Sbjct: 408 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 467

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            M + GC  N VSY  L+ GL +NG   EA  +  +  E     ++ T+ VL++G  + G
Sbjct: 468 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREG 527

Query: 360 YLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCN 402
             ++A  ++ E+ + G                 E ++ +A   + +   +GC +N     
Sbjct: 528 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 587

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           ++++GF Q   LE A+ L  +M      P VV+Y T+I+ L K  R  EA     +ML  
Sbjct: 588 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 647

Query: 463 GWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDA 522
           G  P  +TY  +I+  C+  +++  LKL  + L +      T YN +I  LCS G +E A
Sbjct: 648 GLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQA 705

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI-----ISYN 577
            +L   + +     +  T + L++     G    +  +   +    L PD+     +S  
Sbjct: 706 YKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKK 765

Query: 578 ITLKG 582
           + L+G
Sbjct: 766 LMLEG 770



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 1/249 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L +A  ++  M K G + +   CN+ ++  +  ++L+ A+   + M      P V++Y
Sbjct: 246 GKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITY 305

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LI G C + R  +A   + EM  KG  PD I+Y  ++  LC+ K+I     L  + L+
Sbjct: 306 NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 365

Query: 497 KG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                PD   YN  +H L   G  ++AL+     ++R    + V Y+ ++    + G  D
Sbjct: 366 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 425

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KA EI N +  +   PD+++Y   + GLC   ++  A + L      G  P T+++  L+
Sbjct: 426 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 485

Query: 616 RAVMNNGAS 624
             +  NG S
Sbjct: 486 NGLCKNGNS 494


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/625 (23%), Positives = 293/625 (46%), Gaps = 68/625 (10%)

Query: 65  EIQKCYCPEDVALS-----VIQAYGKNSMPDKALDVFQRM------NEIFGCEAGI--LC 111
            + +C CPE          +I  Y +   PD  L VF R+       ++F   A I    
Sbjct: 105 RMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFS 164

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           ++ + +KA      + E+G+ P+V +Y ++INGL K+ ++  A  V  +M   GV  N +
Sbjct: 165 KEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM 224

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            YN LI G+   G +  +  +++ +   + + P+V   N  +  LCK GR  E  +++D 
Sbjct: 225 TYNCLIHGYSTSGMWKESVRVFKEMS-SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDS 283

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M     + D  +Y + +HG   AG + G + ++  MV  G+  D   +N +I+ + R G 
Sbjct: 284 MVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 343

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI---------------SIWEL 335
           + +   ++E M ++G   ++++++ +I      G++D+A+               +++  
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403

Query: 336 LREKNCN-----------ADSTTHGV----------LINGLCKNGYLNKAIQILNEVEEG 374
           L +  CN           +D  + G+          +IN LCK G + +   +++ +   
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463

Query: 375 GE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G+                 G + +A  L++ M+  G + + YT N+L++G+ +  ++++A
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           + LF++M  K  + T VSYN +++GL +  R   A     EM+E G    + TY+ ++ G
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 583

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
           LC++   D A  L  +        D+  +NI+I  +   G+ ++A +L++ +     VP 
Sbjct: 584 LCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPT 643

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           ++TY  ++  L K    + A  +++ + +    PD    N  ++ L +   ++ A  +L+
Sbjct: 644 ILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLS 703

Query: 598 DALCRGILPTTITWHILVRAVMNNG 622
               +GILP   T  +L+     NG
Sbjct: 704 KIDKKGILPEATTTSLLIYLFSVNG 728



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 230/497 (46%), Gaps = 70/497 (14%)

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC-------LEMWDRMKK---NERE 238
           A+ +++ L++           N +++ L +      C       +E++ RM +    E  
Sbjct: 56  ARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAA 115

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
              +TY   I+   +A   +    V+  ++ +G+  D  +YNA+IDGF + G++ +  +L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 299 WEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
           +  M  +G + NVV+Y+ LI GL +  ++D+A  +   +       ++ T+  LI+G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 358 NGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCK----- 395
           +G   +++++  E+                      GR+ +A  + + M   G K     
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 396 --------------------LNAYTC----------NSLMNGFIQASKLENAIFLFKEMS 425
                                N   C          N+L+N + +   ++ ++ +F++M+
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++G +P +++++T+I+  C++ R  +A      M++ G  PD   YS LI G C  + + 
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 486 MALKLCCQFLQKGFTPD-VTMYNILIHGLCSAGKV---EDALQLYSNMKKRNCVPNLVTY 541
            A +L    L KG  P  +  +  +I+ LC  G+V   +D + L  +  +R   PNL+T+
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR---PNLITF 472

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
           N+L+DG    G+  +A+ + + +    + PDI +YN  + G C   R+ DA     D L 
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532

Query: 602 RGILPTTITWHILVRAV 618
           + +  T+++++I++  +
Sbjct: 533 KRVTLTSVSYNIILHGL 549



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/598 (21%), Positives = 265/598 (44%), Gaps = 82/598 (13%)

Query: 23  ALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALS---- 78
           AL D  ++E     +  LF+ +  + I P +V + S I  L + ++    E V       
Sbjct: 158 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 217

Query: 79  -----------VIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKA 119
                      +I  Y  + M  +++ VF+ M+      ++  C + +  LC+  + ++A
Sbjct: 218 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           +   +S+  KG KPDV SYG +++G   +G + G   +F+ M   GV  +   +N LI+ 
Sbjct: 278 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 337

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           + + G   ++  ++E +  +  V P+++T++ +I+  C+ GR D+ +E ++ M       
Sbjct: 338 YARLGMMDKSLLMFEDMTKQ-GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 396

Query: 240 DSFTYCSFIHG------------------------------------LCKAGNVEGAERV 263
           D+  Y   I G                                    LCK G V   + V
Sbjct: 397 DTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDV 456

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLE 322
              ++ +G   + +T+N+++DG+C  G +KE   L + M   G   ++ +YN L+ G  +
Sbjct: 457 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 516

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
           +G++D+A++++  +  K     S ++ ++++GL +      A ++ +E+ E G       
Sbjct: 517 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 576

Query: 376 ---------EGRLADAAS-LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                         D A+ L+ ++     K +  T N ++    +  + + A  LF  +S
Sbjct: 577 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 636

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  PT+++Y  +I  L K E F +A +    M +    PD    + +I  L    ++ 
Sbjct: 637 TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVA 696

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL----YSNMKKRNCVPNLV 539
            A     +  +KG  P+ T  ++LI+     GK  + ++L    Y  ++++  V N +
Sbjct: 697 KAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAVDNCI 754



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 29/352 (8%)

Query: 280 NAMIDGFCRAGKIKEC-------FELWEVMGRKGCL----NVVSYNILIRGLLENGKVDE 328
           N ++    RA     C        EL++ M R  C      + +YNILI       + D 
Sbjct: 77  NELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDL 136

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
            + ++  L       D  ++  LI+G  K G ++KA                    L  +
Sbjct: 137 GLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA------------------HDLFYK 178

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M++ G   N  T +SL+NG  +  +++ A  + ++M   G  P  ++YN LI+G      
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           + E+    KEM      PD+   +  +  LC+  +I  A  +    + KG  PDV  Y  
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 298

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L+HG  +AG +     L++ M     VP+   +NTL++   + G  DK+L ++  + ++ 
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
           + PDII+++  +   C   R+ DA E  N  +  G+ P T  +  L++   N
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 243/490 (49%), Gaps = 23/490 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R R F   +   + +  + L+    +Y T+IN    +GD+  A      +   G+  +
Sbjct: 51  LARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPD 106

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y   + G+ + G    A  ++  + +   +     TY  +++GL   G   E + ++
Sbjct: 107 SYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVF 165

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+ +    D+  Y + +HGLC+AG  E AE +  E + +G   + V YNA+IDG+C A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 290 GKIKECFELWEVM-GRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+++   +++E M G +   NV +Y  LI GL ++GKV+ A+ ++  + E     +  T+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI G C  G+L  A ++L+ +E  G                   ++ +A   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K+N     SL++G  +  K++ A  L ++M  +G  P   SY++LI+GLC+ ++  +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   +++M+EKG +   +TY+++I+ L +    +   K+  + +  G  PD+  Y + + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
             C  G++EDA  +   M  R   PNLVTYNTL+ G    G   +A   +  ++ +  +P
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 572 DIISYNITLK 581
           +  SY + L+
Sbjct: 526 NEDSYTVLLR 535



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 230/487 (47%), Gaps = 59/487 (12%)

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK-KNEREKDSFTYCSFI 248
           + +  R++  ++  P +   N ++  L +   F +   +  RM  +N R     TY + I
Sbjct: 25  RRLSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR-----TYTTLI 79

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
           +  C AG++  A++    ++ +G+  D+  Y + + G+CRAG +     ++ +M  +GCL
Sbjct: 80  NAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCL 139

Query: 309 NVV-SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY------- 360
               +Y  L+ GLL  G V EA++++  +R  +C  D+  +  +++GLC+ G        
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVL 199

Query: 361 --------LNKAIQILNEVEEG--GEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
                       I + N + +G    G +  A  +   MD + C  N  T   L++G  +
Sbjct: 200 LEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCK 259

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLING---------------------------- 442
           + K+E A+ LF  M   G  P VV+Y  LI G                            
Sbjct: 260 SGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWT 319

Query: 443 -------LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
                  LCK E+  EA  F+  +++KG K + + Y+ LI+GLC++ KID A +L  + +
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            +GF PD   Y+ LI GLC   K+  A  +  +M ++    + VTY  ++D L +    +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              +I++ ++   + PDI++Y + ++  C   RM DA   +   + RG+ P  +T++ L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 616 RAVMNNG 622
           R   N G
Sbjct: 500 RGYANLG 506



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 243/558 (43%), Gaps = 72/558 (12%)

Query: 86  NSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGL 145
           + MP + L  +  +   + C AG          AK+ L SL   GL PD Y+Y + + G 
Sbjct: 65  SRMPARNLRTYTTLINAY-CLAG------DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGY 117

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW-----ERLVMET 200
            ++G L  A  VF  M  RG       Y  L+ G    G    A  ++     +    +T
Sbjct: 118 CRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDT 177

Query: 201 SVY-----------------------------PNVVTYNVMINGLCKCGRFDECLEMWDR 231
            VY                             PN+V YN +I+G C  G  +  L++++ 
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEG 237

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           M  N    +  TY   IHGLCK+G VE A  ++  MVE+G+  + VTY A+I G C  G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 292 IKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           ++  F L  +M   G + N  ++++LI  L +  KV+EA      L +K    +   +  
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LI+GLCK G ++ A +                  L+ +M   G   +A++ +SL++G  +
Sbjct: 358 LIDGLCKTGKIDAADE------------------LMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
             KL  A  + ++M  KG   + V+Y  +I+ L +            +M+  G  PD++T
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y++ +   C+  +++ A  +  Q + +G  P++  YN LI G  + G V  A   +  M 
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN------------HILEERLRPDIISYNI 578
            +   PN  +Y  L+  + K    D +++IW              I E +L      Y+ 
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC 579

Query: 579 TLKGLCSCSRMSDAFEFL 596
            ++ LC   R+ +A  F 
Sbjct: 580 FIRCLCRVDRLEEAKHFF 597



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 259/592 (43%), Gaps = 40/592 (6%)

Query: 53  LVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRM--------NEIFG 104
           ++ H  R+  L+ ++ C        +++       M  +A+ VF  M          ++ 
Sbjct: 122 MLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYA 181

Query: 105 CEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 164
                LC   + E+A+  L      G +P++  Y  +I+G   +G++  AL VF+ M   
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 165 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 224
               NV  Y  LI G  K G   RA  ++ R+V E  + PNVVTY  +I G C  G    
Sbjct: 242 RCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
              +   M+ N    + +T+   I  LCK   VE A+     +V+ G+ V+ V Y ++ID
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+ GKI    EL + M  +G + +  SY+ LI GL    K+ +A  + E + EK   A
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
              T+ ++I+ L +              E G EG       + ++M   G   +  T   
Sbjct: 421 SPVTYTIIIDELVR--------------EVGSEG----PKKIFDKMIATGINPDIVTYTV 462

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
            +  + +  ++E+A  +  +M  +G  P +V+YNTLI G   +    +A+S  + M+ KG
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 464 WKPDMITYSLLINGLCQSKKIDMALK------------LCCQFLQKGFTPDVTMYNILIH 511
           WKP+  +Y++L+  + +    D ++             L     ++       +Y+  I 
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
            LC   ++E+A   +  M+  N  P+   Y +++D   +      AL + + + +    P
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLP 642

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
            + SY I +  LC       A E   D L +      I W IL+  ++  G+
Sbjct: 643 HLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGS 694



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 233/502 (46%), Gaps = 19/502 (3%)

Query: 56  HVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL----- 110
           H  ++ E ++  +C         +I    K+   ++A+ +F RM E  G E  ++     
Sbjct: 230 HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLEPNVVTYTAL 288

Query: 111 ----CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
               C +   + A R L+ +   GL P+ +++  +I+ L K   +  A      + ++GV
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           + N V Y  LIDG  K G    A E+ ++++ E  V P+  +Y+ +I+GLC+  +  +  
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV-PDAHSYSSLIDGLCRQKKLSQAT 407

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
            M + M +   +    TY   I  L +    EG ++++ +M+ +GI  D VTY   +  +
Sbjct: 408 LMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSY 467

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C  G++++   +   M  +G   N+V+YN LIRG    G V +A S +E++  K    + 
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            ++ VL+  + K    + ++ I    +      + D   L+  + +    L A   +  +
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIAD------MKDLQVLLEDITERQLPLAADIYSCFI 581

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
               +  +LE A   F  M     +P+   Y ++I+  C+++   +A + +  M + G+ 
Sbjct: 582 RCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYL 641

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           P + +Y ++I+ LC+      A ++    L K    D  ++ ILI+GL   G V +   L
Sbjct: 642 PHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSL 701

Query: 526 YSNMKKRNCVPNLVTYNTLMDG 547
            S MK+    P+  T N ++ G
Sbjct: 702 LSVMKEHGYQPS-NTINAMITG 722


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 261/542 (48%), Gaps = 60/542 (11%)

Query: 79  VIQAYGKNSMPDKALD-VFQR-----MNEIFGCEAGI--LCRKRQFEKAKRFLNSLWEKG 130
           +++AY +  M D+A+D +FQ      +  I  C   +  L    + + A      L   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L P+ Y+YG  I  L + G+   A+ VF EM E GV  N V  +  I+G      + R+ 
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGL---CSHKRSD 279

Query: 191 EIWERL-VMETSVYP-NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             +E L  +  + +P +   Y  +I G C   +  E  +++  M       D + Y + I
Sbjct: 280 LGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALI 339

Query: 249 HGLCKAGNVEGAERVYREMV----------------ESGIFVDAVTYNAMIDGFCRAGKI 292
           H  CKAGN+  A  ++ +MV                +SGIF+D V YN ++D  C+ GK+
Sbjct: 340 HAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKV 399

Query: 293 KECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E  EL  E+ GR+  L+VV Y  LI G    GK+ +A +++E ++E+    D  T+ +L
Sbjct: 400 EEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNIL 459

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           + G  +NG   +A+++L+ +                     G K N+ T N ++ G   A
Sbjct: 460 VGGFSRNGLKKEALELLDCI------------------GTQGLKPNSATHNRIIEGLCMA 501

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW------- 464
            K++ A      +  K     + +Y+ +++G CK     +AY     + ++G        
Sbjct: 502 GKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALD 557

Query: 465 -KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
            +P+ I Y  LI   C+   +  A  +    +++G TPDV  Y ++I+G C    + +A 
Sbjct: 558 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 617

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            ++++MK+R   P+++TY  ++DG  KT +   A+ +++ ++   L+PDI++Y   L G 
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGK 677

Query: 584 CS 585
           C+
Sbjct: 678 CN 679



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 246/518 (47%), Gaps = 47/518 (9%)

Query: 1   MVISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRI 60
           M ++  R L  L    N +T      +  R+  +  +  +F  +    ++P  V   + I
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 61  LELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK 120
             L   ++     D+    ++A    + P   +D F     I G      C + + ++A+
Sbjct: 270 EGLCSHKR----SDLGYEALRALRAANWP---IDTFAYTAVIRG-----FCSEMKLKEAE 317

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
                +  +G+ PD Y YG +I+   K+G+LL A+A+ ++M   G++TN      L+D F
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTN------LVDQF 371

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
                    KE       ++ ++ + V YN++++ LCK G+ +E +E+ + MK      D
Sbjct: 372 ---------KEF-----RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 417

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
              Y + I G C  G +  A+ ++ EM E GI  D VTYN ++ GF R G  KE  EL +
Sbjct: 418 VVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLD 477

Query: 301 VMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNG 359
            +G +G   N  ++N +I GL   GKV EA +    L +K        +  +++G CK  
Sbjct: 478 CIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKAN 533

Query: 360 YLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           +  KA ++ + + + G          + RM     + N      L+  F +   ++ A  
Sbjct: 534 FTRKAYELFSRLSKQG----------ILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 583

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           +F  +  +G +P V++Y  +ING C+V    EA     +M E+G KPD+ITY+++++G  
Sbjct: 584 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 643

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           ++  +  A+ L  + + +G  PD+  Y  L+ G C+ G
Sbjct: 644 KTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 247/537 (45%), Gaps = 48/537 (8%)

Query: 112 RKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           R   F++A   L     +G  P + S   ++N L++ G +  A+A++  +   G+  N  
Sbjct: 169 RVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDY 228

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y I I    +KG++  A +++ R + E  V PN VT +  I GLC   R D   E    
Sbjct: 229 TYGIFIKALCRKGNFEEAVDVF-REMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRA 287

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++      D+F Y + I G C    ++ AE V+ +MV  GI  D   Y A+I  +C+AG 
Sbjct: 288 LRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGN 347

Query: 292 IKECFELWEVMGRKGC-----------------LNVVSYNILIRGLLENGKVDEAISIWE 334
           + +   L   M   G                  L+ V YNI++  L + GKV+EA+ +  
Sbjct: 348 LLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLN 407

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            ++ +  + D   +  LI G C                   +G+L DA ++   M + G 
Sbjct: 408 EMKGRRMSLDVVHYTTLIAGYCL------------------QGKLVDAKNMFEEMKERGI 449

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + +  T N L+ GF +    + A+ L   +  +G  P   ++N +I GLC   +  EA +
Sbjct: 450 EPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEA 509

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF--------TPDVTMY 506
           F+  + +K  +     YS +++G C++     A +L  +  ++G          P+  MY
Sbjct: 510 FLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMY 565

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
             LI   C  G ++ A  ++  + +R   P+++TY  +++G  +     +A +I+N + E
Sbjct: 566 GKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKE 625

Query: 567 ERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
             ++PD+I+Y + L G    + + DA    ++ + RG+ P  +T+  L+    N G+
Sbjct: 626 RGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGS 682



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 34/352 (9%)

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
           + ++  + R G   E  +      R+G + +++S N L+  L+E+GK+D A++I+  L+ 
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------------EGRLADAAS-- 384
              N +  T+G+ I  LC+ G   +A+ +  E+EE G            EG  +   S  
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 385 ---LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
               +  +      ++ +   +++ GF    KL+ A  +F +M  +G +P    Y  LI+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKP----------------DMITYSLLINGLCQSKKID 485
             CK     +A +   +M+  G K                 D + Y+++++ LC+  K++
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A++L  +   +  + DV  Y  LI G C  GK+ DA  ++  MK+R   P++VTYN L+
Sbjct: 401 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            G  + G   +ALE+ + I  + L+P+  ++N  ++GLC   ++ +A  FLN
Sbjct: 461 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLN 512



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 88/193 (45%)

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
           S  ++  + L+    +V  F EA   + +   +G+ P +++ + L+N L +  KIDMA+ 
Sbjct: 154 SVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVA 213

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +     + G  P+   Y I I  LC  G  E+A+ ++  M++    PN VT +T ++GL 
Sbjct: 214 IYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLC 273

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
                D   E    +       D  +Y   ++G CS  ++ +A +   D +  GI P   
Sbjct: 274 SHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY 333

Query: 610 TWHILVRAVMNNG 622
            +  L+ A    G
Sbjct: 334 IYGALIHAYCKAG 346



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 26/185 (14%)

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQ---SKKIDMALKLCCQFLQKGFTPDVT---- 504
           A+SF  ++ E G++ ++ TY+ LI  LC+    +K+   L       +     D+T    
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 505 -------------------MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
                              + ++L+      G  ++A+      K+R  VP++++ N LM
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           + L + G  D A+ I+ H+    L P+  +Y I +K LC      +A +   +    G+ 
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 606 PTTIT 610
           P  +T
Sbjct: 260 PNAVT 264


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 271/602 (45%), Gaps = 60/602 (9%)

Query: 82  AYGKNSMPDKALDVFQRMNEI-FGCEA----GILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
           AY ++ M   AL V  +M ++ F         +L   R  +      N +   G      
Sbjct: 179 AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSEC 238

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           +   +I+GL +   L  A++   +   + V  ++V  N ++  F K G    A+  +  L
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSXF-CL 296

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +++  +  +  +YN++++GLC  G  DE L   D M+K+  E D  TY +   G    G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL-WEVMGRKGCLNVVSYNI 315
           + GA +V ++M+  G+  D VTY  +I G C+ G I+E  +L  E + R   LNV+ YN+
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQ--------- 366
           L+  L + G+++EA+++++ +       D   + +LI+GLCK G++ +A Q         
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 367 ----------------------------------------ILNEVEEGGEGRL---ADAA 383
                                                   +L  +   G  RL   A+A 
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
            L  +M + G   +  T N+L+NGF +   L  A  + + +  KG  P+VV+Y TL+N  
Sbjct: 537 QLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAY 596

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+V    E + F+ EM      P  +TY++LI GLC+  K+  +L+L      KG  PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
             YN +I   C   ++  ALQLY+ M   NC P  VTY  L++ L   GD      +   
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGA 623
           I +  +     +Y   +K  C+  ++S A  + N  L +G + +   +  ++  +   G 
Sbjct: 717 IEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 624 ST 625
            T
Sbjct: 777 IT 778



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 233/498 (46%), Gaps = 20/498 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC     ++A  F + + + G++PDV +Y T+  G +  G + GA  V  +M  +G+  +
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPD 375

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           +V Y  LI G  + G+   A ++ +   +      NV+ YN++++ LCK GR +E L ++
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQE-TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M+    E D   Y   IHGLCK G V+ A ++Y +M     F       A++ G  + 
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I E    ++   R   + +VV YNI+I G +    + EA+ ++  + E+       T 
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LING C+ G L +A ++L  +      RL             G   +  T  +LMN +
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVI------RLK------------GLVPSVVTYTTLMNAY 596

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   ++       EM      PT V+Y  LI GLC+  +  E+   ++ M  KG  PD 
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           +TY+ +I   C+ K+I  AL+L    L     P    Y +LI+ LC  G ++D  ++  +
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           ++ RN      TY T++      G   KAL  +N +L +     I  Y+  +  LC    
Sbjct: 717 IEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 589 MSDAFEFLNDALCRGILP 606
           +++A  F    L  G+ P
Sbjct: 777 ITEAKYFFVMMLSEGVTP 794



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 20/391 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC++   ++A +    +  K   P  ++   V+ GL K+G++  A   FD      +  +
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV YNI+IDG+ +      A +++ +++ E  + P+VVT+N +ING C+ G   E  +M 
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMI-ERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + ++         TY + ++  C+ GN++       EM  + +    VTY  +I G CR 
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            K+ E  +L E M  KG L + V+YN +I+   +  ++ +A+ ++ ++   NC+    T+
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            VLIN LC  G                   L D   +V  ++     L   T  +++   
Sbjct: 695 KVLINALCIFG------------------DLKDVDRMVVSIEDRNITLKKXTYMTIIKAH 736

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
               ++  A+  F +M  KG   ++  Y+ +IN LCK     EA  F   ML +G  PD 
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
                ++N   Q        +     ++ GF
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 33/251 (13%)

Query: 397 NAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT------------------ 438
           N    + L   + +   + +A+F+  +M       +V +YN+                  
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEI 228

Query: 439 --------------LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI 484
                         LI+GLC+  +  +A SF+ +   K   P +++ + +++  C+   I
Sbjct: 229 KVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLI 287

Query: 485 DMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTL 544
           D+A    C  ++ G   D   YNIL+HGLC AG +++AL    +M+K    P++VTYNTL
Sbjct: 288 DVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTL 347

Query: 545 MDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
             G    G    A ++   +L + L PD+++Y   + G C    + +A +   + L RG 
Sbjct: 348 AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407

Query: 605 LPTTITWHILV 615
               I +++L+
Sbjct: 408 KLNVIFYNMLL 418



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 35/217 (16%)

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEK--GWKPDMITYSLLINGLCQSKKIDMALKLCCQF 494
           +++I  L   +  G A      +LEK   W  + + + +L     + + I  AL +  + 
Sbjct: 137 DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKM 196

Query: 495 LQKGFTPDVTMYNI--------------------------------LIHGLCSAGKVEDA 522
               F   V  YN                                 LIHGLC   K+EDA
Sbjct: 197 KDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA 256

Query: 523 LQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
           +    +  K    P++V+ NT+M    K G  D A   +  +++  L  D  SYNI L G
Sbjct: 257 ISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHG 315

Query: 583 LCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           LC    M +A  F +D    G+ P  +T++ L +  +
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL 352


>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 821

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 171/658 (25%), Positives = 299/658 (45%), Gaps = 97/658 (14%)

Query: 59  RILELIEIQKCYCPED--VALSVIQAYGKNSMPDKALDVFQRMNE---------IFGCEA 107
            +LE++  +K   P D  V+ +VI  + K   P+ AL  F+   +          +    
Sbjct: 6   EVLEMMTNKKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVV 65

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
             LC+  + ++ +  +  L ++G + D   Y   I+G  K G L+ AL    +M E+G+ 
Sbjct: 66  SALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGIN 125

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +VV Y+ILIDG  ++G+  +A  +  +++ E  + PN++TY  +I GLCK G+ ++   
Sbjct: 126 RDVVSYSILIDGLSREGNIEKALGLLGKMIKE-GIEPNLITYTAIIRGLCKKGKLEDAFV 184

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           ++DR+     E D F Y + I G+CK GN+  A  +  +M + GI    +TYN +I+G C
Sbjct: 185 LFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 244

Query: 288 RAGKIKECFEL---------------------------WEVMGR----KGCLNVVSYNIL 316
           +AG++ E  ++                            E+  R    K  +++V  NIL
Sbjct: 245 KAGRVSEADDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNIL 304

Query: 317 IRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG- 375
           ++  L  G   EA +++  + E     D+ T+  +I G CK G +  A+++ NE+ +   
Sbjct: 305 LKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKSSV 364

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN-------------- 406
                          +G L  A  ++  + + G  L+ +T  +L++              
Sbjct: 365 SAAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDL 424

Query: 407 -------------GFIQASKL--------ENAIFLFKEMSRKGCSPTVVSYNTLINGLCK 445
                        G +  + L        E AI ++  M RK  + T  S  T++  L  
Sbjct: 425 VYKVEQLNSDICLGMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPS--TILKTLVD 482

Query: 446 VERFGEAYSFVKEMLEKGWKP-DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
             R  +AY  V    E      D+I Y+++INGLC+   +  AL LC     KG T +  
Sbjct: 483 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTI 542

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN LI+GLC  G + +AL+L+ ++     VP+ VTY  L+D L K G    A ++ + +
Sbjct: 543 TYNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 602

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           + + L P+I+ YN  + G C   +  DA   L+  +   + P   T   +++     G
Sbjct: 603 VSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKG 660



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 253/577 (43%), Gaps = 92/577 (15%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L R+   EKA   L  + ++G++P++ +Y  +I GL K G L  A  +FD +   G+E +
Sbjct: 138 LSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVD 197

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y  LIDG  KKG+  RA  +   +  +  + P+++TYN +INGLCK GR  E     
Sbjct: 198 EFLYVTLIDGICKKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCKAGRVSEA---- 252

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEG------------------------------ 259
           D + K     D  TY + +    K  N++                               
Sbjct: 253 DDISKGVV-GDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLV 311

Query: 260 -----AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYN 314
                A+ +YR M E G+  D  TY  MI+G+C+ G+I++  E++  + +      V YN
Sbjct: 312 GAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKSSVSAAVCYN 371

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
            +I  L + G ++ A+ +   L EK    D  T   L++ +  NG     + ++ +VE+ 
Sbjct: 372 HIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQL 431

Query: 375 GE----GRLADAASLV-NR------------------------------------MDKHG 393
                 G L DA  L+ NR                                    +D + 
Sbjct: 432 NSDICLGMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYL 491

Query: 394 CKLNA--YTCNSL--------MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGL 443
             +NA   T +S+        +NG  +   L  A+ L      KG +   ++YN+LINGL
Sbjct: 492 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGL 551

Query: 444 CKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDV 503
           C+     EA      +   G  P  +TY +LI+ LC+      A KL    + KG  P++
Sbjct: 552 CQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 611

Query: 504 TMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNH 563
            +YN ++ G C  G+ EDA+++ S        P+  T ++++ G  K GD ++AL ++  
Sbjct: 612 LIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAE 671

Query: 564 ILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
             EE +  D + +   +K  C+  RM +A   L + L
Sbjct: 672 FKEENISADFLGFLFLIKCFCTKGRMEEARGLLREML 708



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 256/602 (42%), Gaps = 104/602 (17%)

Query: 24  LFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED--VALSVIQ 81
           L D  +RE     +  L   +++  I+P L+ + + I  L +  K    ED  V    I 
Sbjct: 134 LIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKL---EDAFVLFDRIL 190

Query: 82  AYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTV 141
           ++G        +D F  +  I G     +C+K    +A   L  + ++G++P + +Y TV
Sbjct: 191 SFGIE------VDEFLYVTLIDG-----ICKKGNLNRAFSMLGDMEQRGIQPSILTYNTV 239

Query: 142 INGLVKSG--------------DLLGALAVFD------------EMFERGVETNV----V 171
           INGL K+G              D++    + D            E+  R VE  +    V
Sbjct: 240 INGLCKAGRVSEADDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLV 299

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
             NIL+  F   G Y  A  ++ R + E  + P+  TY  MI G CK G+ ++ LEM++ 
Sbjct: 300 MCNILLKAFLLVGAYGEADALY-RAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNE 358

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           ++K+     +  Y   I  LCK G +E A  V  E+ E G+++D  T   ++      G 
Sbjct: 359 LRKSSVSA-AVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGG 417

Query: 292 IKECFELW---EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN-------- 340
            K   +L    E +    CL +++  IL+  L   G  + AI ++ ++  K+        
Sbjct: 418 DKGILDLVYKVEQLNSDICLGMLNDAILL--LCNRGSFEAAIEVYMIMMRKDLTVTFPST 475

Query: 341 ------------------CNADSTT--------HGVLINGLCKNGYLNKAIQILNEVEEG 374
                              NA  TT        + ++INGLCK G+L KA+ + N  +  
Sbjct: 476 ILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSK 535

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                 +G L +A  L + +D  G   +  T   L++   +     +A
Sbjct: 536 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDA 595

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L   M  KG  P ++ YN++++G CK+ +  +A   +   +    KPD  T S +I G
Sbjct: 596 EKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKG 655

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C+   ++ AL++  +F ++  + D   +  LI   C+ G++E+A  L   M     V  
Sbjct: 656 YCKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLREMLVSESVVK 715

Query: 538 LV 539
           L+
Sbjct: 716 LI 717



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 60/352 (17%)

Query: 326 VDEAISIWELLREKNCNA--DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE------- 376
           +D AI + E++  K  N   D+     +I+G CK G    A+       + G        
Sbjct: 1   MDNAIEVLEMMTNKKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVT 60

Query: 377 -----------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      G++ +   LV R++  G + +    ++ ++G+ +   L +A+   ++M 
Sbjct: 61  YTAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMV 120

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
            KG +  VVSY+ LI+GL +     +A   + +M+++G +P++ITY+ +I GLC+  K++
Sbjct: 121 EKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLE 180

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A  L  + L  G   D  +Y  LI G+C  G +  A  +  +M++R   P+++TYNT++
Sbjct: 181 DAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 240

Query: 546 DGLFKTG------------------------------DCDKALEIWNHILEERLRPDIIS 575
           +GL K G                              + D  LEI    +E ++  D++ 
Sbjct: 241 NGLCKAGRVSEADDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVM 300

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCR-----GILPTTITWHILVRAVMNNG 622
            NI LK         +A     DAL R     G+ P T T+  ++      G
Sbjct: 301 CNILLKAFLLVGAYGEA-----DALYRAMPEMGLTPDTATYATMIEGYCKTG 347



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 27/212 (12%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C+  Q E A R L+      +KPD ++  ++I G  K GD+  AL VF E  E  +  + 
Sbjct: 622 CKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADF 681

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYP--NVVTYNVM----ING----LCKCG 220
           + +  LI  F  KG    A+ +   +++  SV    N V   ++    I G    LC+ G
Sbjct: 682 LGFLFLIKCFCTKGRMEEARGLLREMLVSESVVKLINRVDAELVESESIRGFLVELCEQG 741

Query: 221 RFDECLEMWDRMKK----NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           R  + +++ D +      + +   S+    F++G+ +           +E+ +     D 
Sbjct: 742 RVPQAIKILDEISSTIYLSGKNPGSYQRLQFLNGVNE-----------KEIKKEDYVHDF 790

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            + ++ I   C +GK+++  E   VM    C+
Sbjct: 791 HSLHSTISSLCTSGKLEQANEF--VMSVLSCM 820


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 235/488 (48%), Gaps = 21/488 (4%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+ PDV     V+  L  +       AV +EM + G+E ++V YN L+D F K+G   + 
Sbjct: 164 GVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKV 223

Query: 190 KEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
             + + +    S   PN VTYNV+I GL + G  +E  E+ + M+ + ++  SFTY   I
Sbjct: 224 AMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS-KKASSFTYNPLI 282

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL 308
            GL   G V+    +  EM   GI    VTYNAMI G  ++G ++     +  M   G L
Sbjct: 283 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 342

Query: 309 -NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            +V++YN L+ G  + G + EA+ ++  LR         T+ + I+G C+ G L +A +I
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA-RI 401

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
           L E                  M + GC  N  T   LM G +    L  A   F EM  K
Sbjct: 402 LKE-----------------EMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P   +YNT I     +     A    + ++ +G   D +TY++LI+GLC++  +  A
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDG 547
            +L  + +  G  PD   Y  LIH  C  G + +A ++++NM     +P+ VT+  ++  
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 548 LFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPT 607
             + G+   A   +  +LEE + P+ I+YN+ +  LC   R   A    ++ L RG++  
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624

Query: 608 TITWHILV 615
             T+ +L+
Sbjct: 625 KYTYTLLI 632



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 190/380 (50%), Gaps = 21/380 (5%)

Query: 263 VYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--CL-NVVSYNILIRG 319
           V+ EM++ GI    VTYN ++D F + G+  +   L + M  +G  CL N V+YN++I G
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 250

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
           L   G ++EA  + E +R     A S T+  LI GL   G + K   +  E+E  G    
Sbjct: 251 LTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 309

Query: 376 ------------EGRLADAASL-VNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFK 422
                       +  L +AA +    M   G   +  T NSL+NG+ +A  L+ A+ LF 
Sbjct: 310 VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 369

Query: 423 EMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSK 482
           ++ R G +PTV++YN  I+G C++    EA    +EM E+G  P++ TY++L+ G     
Sbjct: 370 DLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVC 429

Query: 483 KIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYN 542
            + MA +   + L KG  PD   YN  I      G +  AL+L   +       + VTYN
Sbjct: 430 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYN 489

Query: 543 TLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCR 602
            L+ GL KTG+   A E+   ++   L+PD I+Y   +   C    + +A +  N+ +  
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549

Query: 603 GILPTTITWHILVRAVMNNG 622
           G+LP+ +T+ +++ A    G
Sbjct: 550 GLLPSAVTFTVIIHAYCRRG 569



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 182/386 (47%), Gaps = 20/386 (5%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+ P V +Y  +I+GL++SG +  A   F EM   G+  +V+ YN L++G+ K G+   
Sbjct: 304 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKE 363

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++  L     + P V+TYN+ I+G C+ G  +E   + + M +     +  TY   +
Sbjct: 364 ALLLFGDL-RRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILM 422

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            G     ++  A   + EM+  G+  D   YN  I      G I    EL EV+  +G  
Sbjct: 423 KGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGIS 482

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            + V+YNILI GL + G + +A  +   +       D  T+  LI+  C+ G L +A +I
Sbjct: 483 SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKI 542

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            N                   M   G   +A T   +++ + +   L +A   F++M  +
Sbjct: 543 FNN------------------MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 584

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMA 487
           G  P  ++YN LI+ LC++ R   A     EMLE+G   +  TY+LLI+G C+    + A
Sbjct: 585 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 644

Query: 488 LKLCCQFLQKGFTPDVTMYNILIHGL 513
           ++   +  Q G  PD   +  L+ G 
Sbjct: 645 MRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 2/266 (0%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR    E+A+     + E+G  P+V +Y  ++ G +    L  A   FDEM  +G++ + 
Sbjct: 391 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDC 450

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
             YN  I      GD  RA E+ E L++E  +  + VTYN++I+GLCK G   +  E+  
Sbjct: 451 FAYNTRICAELILGDIARALELREVLMLE-GISSDTVTYNILIHGLCKTGNLKDAKELQM 509

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M  N  + D  TY   IH  C+ G +  A +++  M+  G+   AVT+  +I  +CR G
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            +   +  +  M  +G   N ++YN+LI  L   G+   A   +  + E+   A+  T+ 
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 629

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGG 375
           +LI+G CK G    A++   E+ + G
Sbjct: 630 LLIDGNCKVGNWEDAMRFYFEMHQNG 655



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 133/254 (52%), Gaps = 4/254 (1%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A+ F + +  KGL+PD ++Y T I   +  GD+  AL + + +   G+ ++ V YNILI 
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  K G+   AKE+  ++V    + P+ +TY  +I+  C+ G   E  ++++ M  +   
Sbjct: 494 GLCKTGNLKDAKELQMKMV-SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 552

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK-ECFE 297
             + T+   IH  C+ GN+  A   +R+M+E G+  + +TYN +I   CR G+ +     
Sbjct: 553 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHH 612

Query: 298 LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
             E++ R    N  +Y +LI G  + G  ++A+  +  + +   + D  TH  L+ G   
Sbjct: 613 FHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF-- 670

Query: 358 NGYLNKAIQILNEV 371
           +G+++  I+ L+ V
Sbjct: 671 DGHVHHTIEYLDIV 684



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+    + AK     +   GL+PD  +Y  +I+   + G L  A  +F+ M   G+  +
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V + ++I  + ++G+   A   W R ++E  V PN +TYNV+I+ LC+ GR       +
Sbjct: 555 AVTFTVIIHAYCRRGNLYSAYG-WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 613

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M +     + +TY   I G CK GN E A R Y EM ++GI  D +T+ A++ GF   
Sbjct: 614 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF--D 671

Query: 290 GKIKECFELWEVM 302
           G +    E  +++
Sbjct: 672 GHVHHTIEYLDIV 684


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 210/413 (50%), Gaps = 26/413 (6%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           N V+Y +++ G CK G F + LE+ D MK N    +   + + I GLC AG V  A   +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLEN 323
           R + E     +  TY+ ++D  C++G+  E + L   M +KGC  NVV+YN LI G  + 
Sbjct: 89  RRIGED-CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            ++DE + + + + ++ C AD  T+ ++++  CKN  +++A ++LN +E           
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----------- 196

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQA--SKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      K N  T NSL      A   +   A+ L ++M ++G  P  V+Y T++ 
Sbjct: 197 -----------KRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLL 245

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LCK  R  EAY  +  M  +G K D ++Y +L+     + +   +L+L  + L  G+  
Sbjct: 246 MLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYIL 305

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D    N++IH  C AG + +A QL+ +M +R  +P+ VTYNTL+    K    D A+++ 
Sbjct: 306 DTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLL 365

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
           + +++   +P++I+YN  +K  C   R  +A       +  G  P  +++  L
Sbjct: 366 HQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 24/392 (6%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SYG ++ G  K+G+   AL + DEM   GV  NVV +  +I G    G   +A   + R+
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             + +  PNV TY+ +++ LCK G+  E   +   M K     +  TY + I G  K   
Sbjct: 92  GEDCA--PNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           ++    + +EM + G   D +TY  ++D FC+   I E + L   + ++   NVV+YN L
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR---NVVTYNSL 206

Query: 317 IRGL--LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
              L   E  +  EA+S+ E + ++    +   +  ++  LCKN  L++A Q+L  +   
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR  D+  L+ RM   G  L+  T N +++ F +A  L  A
Sbjct: 267 GCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LFK M ++G  P+ V+YNTLI   CK ++   A   + +M++  +KP++ITY+ +I  
Sbjct: 327 HQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            C+ ++ + A  +    +  G  PD   Y  L
Sbjct: 387 FCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 165/338 (48%), Gaps = 28/338 (8%)

Query: 282 MIDGFCRAGKIKECFELWE--VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           M+  F  + + ++ +E +   ++G    +N VSY IL++G  + G+  +A+ + + ++  
Sbjct: 1   MLQIFVDSKRHRDGYEFYRHRLLGSYA-VNEVSYGILMQGFCKAGEFQQALELLDEMKSN 59

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               +   H  +I GLC  G +++A+     + E                    C  N Y
Sbjct: 60  GVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-------------------CAPNVY 100

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T ++L++   ++ +   A  L  EM +KGCSP VV+YN LI+G  K+ER  E    +KEM
Sbjct: 101 TYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA--G 517
            ++G + D+ITY+++++  C++  ID A +L     ++    +V  YN L   L +A   
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGD 216

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +  +AL L   M +    PN V Y T++  L K    D+A ++   +  +  + D +SY 
Sbjct: 217 RTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYK 276

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           I +    +  R  D+ E L   L  G +  T T ++++
Sbjct: 277 ILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVI 314



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 176/376 (46%), Gaps = 36/376 (9%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK----KGDYMR 188
           P+VY+Y T+++ L KSG    A  +  EM ++G   NVV YN LIDGF K        M 
Sbjct: 97  PNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLML 156

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
            KE+ +R         +V+TY ++++  CK    DE   + + ++K    ++  TY S  
Sbjct: 157 LKEMSQR-----GCRADVITYTMILDIFCKNNSIDEAYRLLNALEK----RNVVTYNSLF 207

Query: 249 HGLCKAGNVEGAE--RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
             L  A      E   +  +M++ G   + V Y  ++   C+  ++ E +++   M  +G
Sbjct: 208 TALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQG 267

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  + VSY IL+      G+  +++ +   +       D+ T  V+I+  CK G L++A 
Sbjct: 268 CKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAH 327

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           Q                  L   M + G   +  T N+L+  F +A + + A+ L  +M 
Sbjct: 328 Q------------------LFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMI 369

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           +    P V++YN++I   C+ +R  EA    + M++ G  PD ++Y+ L   L +++   
Sbjct: 370 QADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL--KLSKNEAAI 427

Query: 486 MALKLCCQFLQKGFTP 501
              K+   +L+K F P
Sbjct: 428 YDQKVHDTYLRKHFDP 443



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 33/359 (9%)

Query: 91  KALDVFQRMNE-------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           +AL  F+R+ E        +      LC+  Q  +A   +  + +KG  P+V +Y  +I+
Sbjct: 83  QALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALID 142

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G  K   L   L +  EM +RG   +V+ Y +++D F K      A  +   L       
Sbjct: 143 GFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR---- 198

Query: 204 PNVVTYNVMINGLCKC--GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
            NVVTYN +   L      R  E L + ++M +     +   Y + +  LCK   ++ A 
Sbjct: 199 -NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAY 257

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
           +V   M   G   D V+Y  ++  F  AG+  +  EL   ++G    L+  + N++I   
Sbjct: 258 QVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKF 317

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G + EA  +++ + ++     + T+  LI   CK    + A+++L++          
Sbjct: 318 CKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQ---------- 367

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                   M +   K N  T NS++  F +  + E A  +F+ M   GC P  VSY TL
Sbjct: 368 --------MIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 271/587 (46%), Gaps = 40/587 (6%)

Query: 67  QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSL 126
             CY    +A  +  A     +   ++D+      +     G + +    +  +  L  +
Sbjct: 126 HNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGAISKSGSIDLVEMRLKEM 185

Query: 127 WEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERG-VETNVVCYNILIDGFFKKGD 185
            + G +PD Y+  +V+     S     AL+VF+E++ RG V+ +V+  +IL+  F K G+
Sbjct: 186 CDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVL--SILVLTFSKCGE 243

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
             +A E+ ER+  +  +  N  T+ V+I+G  +  R D+ L+++ +M+K+    D   Y 
Sbjct: 244 VDKAFELIERM-EDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYD 302

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGR 304
           + I GLC    +E A  +  EM E GI  D    + +I        I    E   E +  
Sbjct: 303 ALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDT 362

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN----------------CNADSTTH 348
           +  L  + YN ++ GL+    VD+A  +   +   N                    +T+ 
Sbjct: 363 EAML--LLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSF 420

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            ++I+GLC  G L+ A+ +  ++   G                   RL +   L+  M  
Sbjct: 421 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG 480

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G +   +T NS+     +   +  A+ + +EM   G  P +  Y  L+  LCK +R  E
Sbjct: 481 SGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAE 540

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A +F+ EM+ +G+ PD++ YS  I+G  + K +D AL++      +G+ PDV  YN LI+
Sbjct: 541 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 600

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C   +V +A  +   M  +  VP++VTYN L+DG  K GD D+A    + ++ +   P
Sbjct: 601 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREP 660

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           ++I+Y   + GLC+  R  DA    N+   +G  P  I++  L+  +
Sbjct: 661 NVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 707



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 262/557 (47%), Gaps = 49/557 (8%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           ++  + K    DKA ++ +RM ++        F        R+ + +KA +    + + G
Sbjct: 234 LVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSG 293

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
             PDV  Y  +I GL    ++  AL +  EM E G++ ++   + LI    ++ D  R  
Sbjct: 294 FAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLI 353

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E  ERL  +      ++ YN ++NGL      D+   +   M   +   D+F    F   
Sbjct: 354 E--ERL-EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMT-GDNYTDNFEVNKFF-- 407

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LN 309
                           MV+  +     +++ +IDG C  GK+     L+  M R GC  N
Sbjct: 408 ----------------MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQN 451

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V+ YN LI  L  + +++E   + + ++         TH  +   LC+   +  A+ ++ 
Sbjct: 452 VLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVR 511

Query: 370 EVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E+   G                   R A+A + +  M + G   +    ++ ++GF++  
Sbjct: 512 EMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIK 571

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            ++ A+ +F+++  +G  P VV+YNTLING CKV+R  EA+  + EM+ KG  P ++TY+
Sbjct: 572 AVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYN 631

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
           LLI+G C++  ID A     + + K   P+V  Y  LI GLC+AG+ +DA+ L++ M+ +
Sbjct: 632 LLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGK 691

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDA 592
            C PN +++  L+ GL K G  D AL ++   + ER  PD I Y   +    S    + A
Sbjct: 692 GCSPNRISFIALIHGLCKCGWPDAAL-LYFREMGERETPDTIVYVALITSFISNKNPTLA 750

Query: 593 FEFLNDALCRGILPTTI 609
           FE L + + +G  P  +
Sbjct: 751 FEILKEMVAKGKFPDPL 767


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 271/589 (46%), Gaps = 28/589 (4%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y H   +++ +L  L   +L     RIL L+  +   
Sbjct: 170 VLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIE 229

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMN------EIFGCEAGI--LCRKRQFEKAKRF 122
              +    V+ +Y +  M   AL +   M       ++  C   I  L +  + EKA RF
Sbjct: 230 RSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF 289

Query: 123 LNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK 182
           L  +   G++PD+ SY  +I G      +  AL +  EM  +G   + V Y  ++    K
Sbjct: 290 LERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCK 349

Query: 183 KGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSF 242
                  K + E +V  +++ P+ VTYN +I  L K G  D+ L      ++     D  
Sbjct: 350 DRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409

Query: 243 TYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVM 302
            Y + +   CK  N++ A+ +  +M   G   D VTY A+IDGFCR GKI E  ++ + M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469

Query: 303 GRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYL 361
            + GC  N V+Y +L+ GL  NGK  EA  +  +  E     ++ T+  +++GL + G L
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529

Query: 362 NKAIQILNE-VEEGGEGRLADAASLVNRMDKH----------------GCKLNAYTCNSL 404
           ++A  +  E +E+G      D   L+  + ++                GC +N     S+
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + GF Q   L+ A+ + ++M      P  ++Y TL + L K  R  EA   + +ML KG 
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P  +TY  +I+  CQ  ++D  +KL  + + +   P  T+YN +I  LC  G  E+A +
Sbjct: 650 DPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEK 707

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
           L   + +     +  T + L++     G+   A ++   +    L PD+
Sbjct: 708 LLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDL 756



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 237/504 (47%), Gaps = 25/504 (4%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLK--PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           IL + R  + A+R L  +  +G++  P+ +SY  V+    ++G L  AL +   M + GV
Sbjct: 206 ILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALRILTLMQKAGV 263

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
           E ++   N  I    K     +A    ER+ +   + P++V+YN +I G C   R D+ L
Sbjct: 264 EPDLSICNTAIYVLVKGNKLEKALRFLERMKV-AGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE-SGIFVDAVTYNAMIDG 285
           E+   M       D  +Y + +  LCK   VE  +R+   MV+ S +  D VTYN +I  
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382

Query: 286 FCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
             + G   +          KG  ++ V Y+ ++    +N  +D+A S+   +  K CN D
Sbjct: 383 LSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T+  +I+G C+ G +++A ++L +                  M KHGCK N  T   L
Sbjct: 443 VVTYTAIIDGFCRVGKIDEAKKMLQQ------------------MYKHGCKPNTVTYTVL 484

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           +NG     K   A  +         +P  ++Y+ +++GL +  +  EA    +EM+EKG+
Sbjct: 485 LNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGF 544

Query: 465 KPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQ 524
            P+ +  +LLI  LC+++ +  A K   + L KG   +V  +  +I+G C  G ++ AL 
Sbjct: 545 LPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALS 604

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLC 584
           +  +M   N  P+ +TY TL D L K    D+A E+   +L + + P  ++Y   +   C
Sbjct: 605 MLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFC 664

Query: 585 SCSRMSDAFEFLNDALCRGILPTT 608
              R+ D  + L   + R    T 
Sbjct: 665 QWGRVDDMMKLLEKMIARQPFKTV 688



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 225/486 (46%), Gaps = 21/486 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           + D   Y T+++ L K+    GA  +   M  RG+E +   ++ ++  + + G    A  
Sbjct: 194 RHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALR 253

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           I   L+ +  V P++   N  I  L K  + ++ L   +RMK    E D  +Y   I G 
Sbjct: 254 ILT-LMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           C    ++ A  +  EM   G   D V+Y  ++   C+  K++E   L E M +   L  +
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPD 372

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN LI  L ++G  D+A+       EK  + D   +  +++  CKN  ++KA     
Sbjct: 373 QVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA----- 427

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                         SLV  M   GC  +  T  ++++GF +  K++ A  + ++M + GC
Sbjct: 428 -------------KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGC 474

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  V+Y  L+NGLC   +  EA   +    E  W P+ ITYS +++GL +  K+  A  
Sbjct: 475 KPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACD 534

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + ++KGF P+    N+LI  LC    V  A +       + C  N+V + +++ G  
Sbjct: 535 LTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFC 594

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           + GD D AL +   +      PD I+Y      L   SR+ +A E +   L +GI PT +
Sbjct: 595 QIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPV 654

Query: 610 TWHILV 615
           T+  ++
Sbjct: 655 TYRAVI 660



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 20/384 (5%)

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D+  Y + +  L K    +GA R+ R M   GI      ++ ++  + RAG ++    + 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 300 EVMGRKGCLNVVSY-NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
            +M + G    +S  N  I  L++  K+++A+   E ++      D  ++  LI G C  
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCD- 314

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                              R+ DA  L+  M   GC  +  +  ++M    +  K+E   
Sbjct: 315 -----------------VHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVK 357

Query: 419 FLFKEMSRKG-CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
            L + M +     P  V+YNTLI  L K     +A  F++E  EKG+  D + YS +++ 
Sbjct: 358 RLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDS 417

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPN 537
            C++K ID A  L      KG  PDV  Y  +I G C  GK+++A ++   M K  C PN
Sbjct: 418 FCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPN 477

Query: 538 LVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
            VTY  L++GL   G   +A E+ N   E    P+ I+Y+  + GL    ++S+A +   
Sbjct: 478 TVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTR 537

Query: 598 DALCRGILPTTITWHILVRAVMNN 621
           + + +G LP  +  ++L++++  N
Sbjct: 538 EMIEKGFLPNPVDINLLIQSLCRN 561



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G L +A  ++  M K G + +   CN+ +   ++ +KLE A+   + M   G  P +VSY
Sbjct: 246 GMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSY 305

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N LI G C V R  +A   + EM  KG  PD ++Y  ++  LC+ +K++   +L    +Q
Sbjct: 306 NCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ 365

Query: 497 KG-FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
                PD   YN LI+ L   G  +DAL      +++    + V Y+ ++D   K  + D
Sbjct: 366 NSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNID 425

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           KA  +   +  +   PD+++Y   + G C   ++ +A + L      G  P T+T+ +L+
Sbjct: 426 KAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLL 485

Query: 616 RAVMNNGAS 624
             + +NG S
Sbjct: 486 NGLCHNGKS 494



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 20/350 (5%)

Query: 275 DAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW 333
           DA+ Y  M+D   +    +    +  +M R+G   +  +++ ++      G +  A+ I 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
            L+++     D +     I  L K   L KA++ L                   RM   G
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLE------------------RMKVAG 297

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
            + +  + N L+ G+    ++++A+ L  EM  KGC P  VSY T++  LCK  +  E  
Sbjct: 298 IEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVK 357

Query: 454 SFVKEMLEKG-WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHG 512
             ++ M++     PD +TY+ LI  L +    D AL    +  +KGF  D   Y+ ++  
Sbjct: 358 RLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDS 417

Query: 513 LCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPD 572
            C    ++ A  L  +M  + C P++VTY  ++DG  + G  D+A ++   + +   +P+
Sbjct: 418 FCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPN 477

Query: 573 IISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++Y + L GLC   +  +A E +N +      P  IT+  ++  +   G
Sbjct: 478 TVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREG 527



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 75/152 (49%)

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           ++ D I Y  +++ L +++    A ++     ++G       ++ ++     AG + +AL
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++ + M+K    P+L   NT +  L K    +KAL     +    + PDI+SYN  +KG 
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C   R+ DA E + +   +G  P  ++++ ++
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVM 344


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 244/491 (49%), Gaps = 4/491 (0%)

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
           YSY  +I  L K+G +     +  E++  G++  VV YN+L+D   K G    A  +  R
Sbjct: 12  YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 71

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           +  +  + P+VVT+ ++INGL +  RF E   +   M++     +   Y   I   C+ G
Sbjct: 72  ME-QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKG 130

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYN 314
           +   A R++ EMV   +   AVTYN +    C+ G+++    + E M   G  ++   +N
Sbjct: 131 HCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN 190

Query: 315 ILIRGLLENGK-VDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            ++  LL+  + ++  +SI   +  +    +       +  LCK G   +A+ I  +   
Sbjct: 191 TVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 250

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
            G+  + +A  ++  M   G +L++ T N ++ G  + SK+E AI L  +M+R+G  P +
Sbjct: 251 KGK-YMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
            ++NTL++  C + +  E +  + +M  +G +PD+++Y  +I+G C++K I  A +   +
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
            + +G  P+V +YN LI G    G +  A+     MK     P  VTY +LM  +   G 
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            ++A  I++   E  +   +I Y I ++G C   +M +A  +  +   RGI P  +T+  
Sbjct: 430 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 489

Query: 614 LVRAVMNNGAS 624
           L+ A   +G S
Sbjct: 490 LMYAYSKSGNS 500



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 243/535 (45%), Gaps = 38/535 (7%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + +     L  LW  GL+P V +Y  +++ L KSG +  A  +   M + G+  +
Sbjct: 21  LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 80

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV + ILI+G   +G+      I  + + +  V PN V YN +I   C+ G   + L ++
Sbjct: 81  VVTFGILINGL-ARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 139

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC-R 288
           D M   + +  + TY      LCK G +E AER+  +M+  G+ V    +N ++     R
Sbjct: 140 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 199

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIW-------------- 333
             +++    +   M  +G   N       +R L + GK  EA+ IW              
Sbjct: 200 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEAT 259

Query: 334 ---ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMD 390
              + +  K    DS T+ ++I G CK+  + +AI++  +                  M 
Sbjct: 260 KVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD------------------MT 301

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
           + G K + +T N+L++ +    K+E    L  +M  +G  P +VSY T+I+G CK +   
Sbjct: 302 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 361

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
           +A  ++ E++++G KP++  Y+ LI G  ++  I  A+         G  P    Y  L+
Sbjct: 362 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLR 570
           + +C AG VE+A  ++S  ++ N    ++ Y  ++ G  K G   +A+  +  +    + 
Sbjct: 422 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 481

Query: 571 PDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           P+ ++Y   +          +A +  ++ +  G++P  IT+  L+      G  T
Sbjct: 482 PNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKT 536



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 196/434 (45%), Gaps = 37/434 (8%)

Query: 201 SVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGA 260
           +V  N  +Y  MI  LCK G+ D   EM   + +   +    TY   +  LCK+G VE A
Sbjct: 6   NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 65

Query: 261 ERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRG 319
            R+   M + G+    VT+  +I+G  R  +  E   + + M + G   N V YN LI  
Sbjct: 66  FRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGW 125

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG---- 375
               G   +A+ +++ +  K     + T+ ++   LCK G + +A +IL ++   G    
Sbjct: 126 HCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH 185

Query: 376 --------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLF 421
                           RL    S+ N M   G + N     + M    +  K + A+ ++
Sbjct: 186 CGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIW 245

Query: 422 KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQS 481
            +   KG                  +   EA   ++ ML KG + D ITY+++I G C+ 
Sbjct: 246 FKTLNKG------------------KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKD 287

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
            K++ A+KL     ++GF PD+  +N L+H  C+ GK+E+   L   MK     P++V+Y
Sbjct: 288 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 347

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
            T++DG  K  D  KA E    +++  L+P++  YN  + G      +S A + +     
Sbjct: 348 GTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKS 407

Query: 602 RGILPTTITWHILV 615
            GI PT +T+  L+
Sbjct: 408 NGIQPTNVTYGSLM 421



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 175/387 (45%), Gaps = 36/387 (9%)

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAI 330
           + ++  +Y AMI   C+AGK+   FE+   + R G    VV+YN+L+  L ++G+V+EA 
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
            +   + +        T G+LINGL +     +   +L E+E+ G               
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G  + A  L + M     K  A T N +     +  ++E A  + ++M   G +   
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 434 VSYNTLINGLC-KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK--------- 483
             +NT++  L  +  R     S   EM+ +G +P+    +  +  LC+  K         
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 484 --------IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
                   +  A K+    L KG   D   YNI+I G C   K+E+A++L+ +M +R   
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
           P+L T+NTL+      G  ++   + + +  E L+PDI+SY   + G C    +  A E+
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 366

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           L + + RG+ P    ++ L+     NG
Sbjct: 367 LTELMDRGLKPNVFIYNALIGGYGRNG 393



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 36/337 (10%)

Query: 304 RKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           R   LN  SY  +I+ L + GKVD    +   L          T+ VL++ LCK+     
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS----- 59

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        GR+ +A  L  RM++ G   +  T   L+NG  +  +      + +E
Sbjct: 60  -------------GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQE 106

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M + G SP  V YN LI   C+     +A     EM+ K  KP  +TY+L+   LC+  +
Sbjct: 107 MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE 166

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCS-AGKVEDALQLYSNMKKRNCVPNLVTYN 542
           ++ A ++    L  G T    ++N ++  L     ++E  + + + M  R   PN     
Sbjct: 167 MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMT 226

Query: 543 TLMDGLFKTGDCDKALEIW-----------------NHILEERLRPDIISYNITLKGLCS 585
             M  L K G   +A+ IW                   +L + +  D I+YNI ++G C 
Sbjct: 227 ACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCK 286

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            S+M +A +   D   RG  P   T++ L+ A  N G
Sbjct: 287 DSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 323



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  YG+N     A+D  + M        N  +G     +C     E+AK   +   E 
Sbjct: 384 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 443

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            +   V  Y  +I G  K G ++ A+A F+EM  RG+  N + Y  L+  + K G+   A
Sbjct: 444 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 503

Query: 190 KEIWERLVMETSVYPNVVTYNVMI 213
            ++++ +V  + V P+ +TY  +I
Sbjct: 504 SKLFDEMV-GSGVIPDNITYGTLI 526



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 43/89 (48%)

Query: 530 KKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           + RN   N  +Y  ++  L K G  D   E+   +    L+P +++YN+ +  LC   R+
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 590 SDAFEFLNDALCRGILPTTITWHILVRAV 618
            +AF         G+ P+ +T+ IL+  +
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGL 91


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 275/591 (46%), Gaps = 35/591 (5%)

Query: 4   SAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILEL 63
           S + +  L+  +K+   AL  F  A+  P + HS   +  ++ +L   +    V ++L+ 
Sbjct: 35  SQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDE 94

Query: 64  IEIQKCYCP-EDVALSVIQAYGKNSMPD---KALDVFQRMN-----EIFGCEAGILCRKR 114
           +       P +D+ +++I+  G+  M     K LD+  + +     +IF     +L  K 
Sbjct: 95  MPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLV-KE 153

Query: 115 QFEKAKRFL-NSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCY 173
             + A+ F   S+   G++ D Y++G ++ GL  +  +     +   +  RGV  N V Y
Sbjct: 154 DIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVY 213

Query: 174 NILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMK 233
           N L+    + G   RA+ +     ME    PN VT+N++I+G CK G   + L + ++  
Sbjct: 214 NTLLHALCRNGKVGRARNLMNE--MED---PNDVTFNILISGYCKEGNSVQALVLLEKSF 268

Query: 234 KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIK 293
                 D  +    +  LC AG    A  V   +   G  +D V YN +I GFC AGK+K
Sbjct: 269 SMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVK 328

Query: 294 ECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLI 352
                 + M  KGCL NV +YN+LI G  E+G +D A+ ++  ++      +  T   LI
Sbjct: 329 VGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLI 388

Query: 353 NGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
            GLC    +     IL  +EE                 K G + +    NS++ G ++ +
Sbjct: 389 RGLCSEERIEDGFSILELMEES----------------KEGSRGHISPYNSIIYGLLKKN 432

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
             + +     +M      P  V  + +I   CK     +A     +M+++G  P ++ Y+
Sbjct: 433 GFDESAEFLTKMG--NLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYN 490

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            L++G  +   +  A++L  + +     P  + +N +I G C  GKVE AL+L  ++  R
Sbjct: 491 CLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITAR 550

Query: 533 NCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            CVPN  TY+ L+D L + GD  KA++++  ++++ + PD+  +N  L  L
Sbjct: 551 GCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSL 601



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 217/516 (42%), Gaps = 97/516 (18%)

Query: 200 TSVYPNVV----TYNVMINGLCKCGRFDECLEMWDRMKKN-EREKDSFTYCSFIHGLCKA 254
            S  PN V    TY  +I+ LC   RFD   ++ D M  +         + + I GL +A
Sbjct: 59  ASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRA 118

Query: 255 ----------------------------------GNVEGAERVYRE-MVESGIFVDAVTY 279
                                              +++ A   YR+ M+ SG+  D  T+
Sbjct: 119 RMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTF 178

Query: 280 NAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
             ++ G C   +I E F+L +++  +G   N V YN L+  L  NGKV  A ++   + +
Sbjct: 179 GILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED 238

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLAD 381
            N      T  +LI+G CK G   +A+ +L +    G                  GR  +
Sbjct: 239 PN----DVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTME 294

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
           AA ++ R++  G  L+    N+L+ GF  A K++  +   K+M  KGC P V +YN LI+
Sbjct: 295 AAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLIS 354

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC--CQFLQKGF 499
           G  +      A     +M   G K + +T+  LI GLC  ++I+    +    +  ++G 
Sbjct: 355 GFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGS 414

Query: 500 TPDVTMYNILIHGL---------------------------------CSAGKVEDALQLY 526
              ++ YN +I+GL                                 C  G +EDA ++Y
Sbjct: 415 RGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVY 474

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
             M     +P+++ YN L+ G  K G+  +A+E+ N ++     P   ++N  + G C  
Sbjct: 475 DQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQ 534

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++  A + + D   RG +P T T+  L+  +  NG
Sbjct: 535 GKVESALKLVEDITARGCVPNTETYSPLIDVLCRNG 570



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 1/123 (0%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           ++ C      ++    +A   +N +      P   ++  VI G  + G +  AL + +++
Sbjct: 488 VYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDI 547

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
             RG   N   Y+ LID   + GD  +A +++ ++V +  + P++  +N ++  L +   
Sbjct: 548 TARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMV-DKGILPDLFIWNSLLLSLSQERH 606

Query: 222 FDE 224
           F +
Sbjct: 607 FSK 609


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 229/429 (53%), Gaps = 23/429 (5%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
           L+ +  + P +VT N ++NGLC  G  +  L + ++M+      ++ TY + ++GLCK G
Sbjct: 135 LMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIG 194

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
           +  GA    ++MV+  +  + V YNA++DG C+ G + E   L   MG      NVV+YN
Sbjct: 195 DTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYN 254

Query: 315 ILIRGLL-ENGKVDEAISIW-ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
            LI+GL  E G   E + ++ E++ EK    D  T  +L++G CK               
Sbjct: 255 CLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCK--------------- 299

Query: 373 EGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG--CS 430
              EG L  A S+V  M + G + N  T NSL+ G+   S++E A+ +F  M R+G  C 
Sbjct: 300 ---EGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCL 356

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P+VV++N+LI+G CKV+   +A S + EM+ KG  PD+ T++ LI G C+ KK   A +L
Sbjct: 357 PSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAREL 416

Query: 491 CCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
                + G  P++    +++ GL       +A+ L+  M K     ++V YN ++DG+ K
Sbjct: 417 FFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCK 476

Query: 551 TGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
            G  + A ++ + +L + L+ D  +YNI +KGLC    + DA E L      G  P   +
Sbjct: 477 MGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCS 536

Query: 611 WHILVRAVM 619
           +++ V+ ++
Sbjct: 537 YNVFVQGLL 545



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 264/552 (47%), Gaps = 48/552 (8%)

Query: 28  ATREPGYAHSPH--LFHHILRRLIDPKLVVHVSRILELIEIQKCYCPED----------- 74
           +T  P  + + H  L  + +R L     VV V     ++ +    C +D           
Sbjct: 28  STSPPPISDAAHRTLLLNSIRTLETADAVVAVDFFHRMLTLTPFPCIQDFNLLFGLVAKS 87

Query: 75  ----VALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
                A+S+I+    +S+ D + DV   +N    C    LC  R+       L  + + G
Sbjct: 88  QHYATAISLIKIL--HSLGDGSADVCT-LNIAINC----LCHMRKTTLGFAVLGLMTKIG 140

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           L+P + +  T++NGL   GD+  AL + ++M   G   N   Y  L++G  K GD   A 
Sbjct: 141 LEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGAL 200

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           E  +++V + ++ PNVV YN +++GLCK G   E L +   M     E +  TY   I G
Sbjct: 201 ECLKKMV-KRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQG 259

Query: 251 LC-KAGNVEGAERVYREMV-ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC- 307
           LC + G       ++ EMV E GI  D  T++ ++DGFC+ G +     +   M R G  
Sbjct: 260 LCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVE 319

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELL-RE-KNCNADSTTHGVLINGLCKNGYLNKAI 365
            NVV+YN LI G     +++EA+ ++ L+ RE + C     TH  LI+G CK   ++KA+
Sbjct: 320 PNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAM 379

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            +L+E                  M   G   + +T  SL+ GF +  K   A  LF  M 
Sbjct: 380 SLLSE------------------MVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK 421

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P + +   +++GL K     EA +  + M++ G   D++ Y+++++G+C+  K++
Sbjct: 422 EHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLN 481

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
            A KL    L KG   D   YNI+I GLC  G ++DA +L   MK+  C PN  +YN  +
Sbjct: 482 DARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 541

Query: 546 DGLFKTGDCDKA 557
            GL +  D  ++
Sbjct: 542 QGLLRKYDIARS 553



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 191/379 (50%), Gaps = 24/379 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLV-KSGDLLGALAVFDEMF-ERGVE 167
           LC++    +A   L+ +    ++P+V +Y  +I GL  + G     + +F+EM  E+G+ 
Sbjct: 225 LCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIV 284

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
            +V  ++IL+DGF K+G  +RA+ +   +V    V PNVVTYN +I G C   + +E + 
Sbjct: 285 PDVQTFSILVDGFCKEGLLLRAESVVGFMV-RIGVEPNVVTYNSLIAGYCLRSQMEEAMR 343

Query: 228 MWDRMKKNERE--KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
           ++  M +          T+ S IHG CK   V+ A  +  EMV  G+  D  T+ ++I G
Sbjct: 344 VFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGG 403

Query: 286 FCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
           FC   K     EL+  M   G + N+ +  +++ GLL+     EA++++  + +   + D
Sbjct: 404 FCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLD 463

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
              + ++++G+CK G LN                  DA  L++ +   G K+++YT N +
Sbjct: 464 IVIYNIMLDGMCKMGKLN------------------DARKLLSCVLVKGLKIDSYTYNIM 505

Query: 405 MNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGW 464
           + G  +   L++A  L ++M   GC P   SYN  + GL +      +  +++ M +KG+
Sbjct: 506 IKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGF 565

Query: 465 KPDMITYSLLINGLCQSKK 483
             D  T  LLI  L  +++
Sbjct: 566 PVDATTAELLIRFLSANEE 584



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 131/257 (50%), Gaps = 12/257 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRM-NEIFGCEAGIL---------CRKRQFEKAKRFLNSLW 127
           S+I  Y   S  ++A+ VF  M  E  GC   ++         C+ ++ +KA   L+ + 
Sbjct: 327 SLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV 386

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
            KGL PDV+++ ++I G  +    L A  +F  M E G   N+    +++DG  K     
Sbjct: 387 GKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDS 446

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A  ++ R +M++ +  ++V YN+M++G+CK G+ ++  ++   +     + DS+TY   
Sbjct: 447 EAVTLF-RAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIM 505

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG- 306
           I GLC+ G ++ AE + R+M E+G   +  +YN  + G  R   I    +  ++M  KG 
Sbjct: 506 IKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGF 565

Query: 307 CLNVVSYNILIRGLLEN 323
            ++  +  +LIR L  N
Sbjct: 566 PVDATTAELLIRFLSAN 582


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 165/658 (25%), Positives = 297/658 (45%), Gaps = 71/658 (10%)

Query: 2   VISAKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
            I+   + +L     +PHTAL      ++ P + H+   +  +L  +   K+V  V +I+
Sbjct: 65  AITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKII 124

Query: 62  ELIEIQKCYCPEDVA-------------------------LSVIQAYG----KNSMPDKA 92
            +  I+ CY   D                           L+++  +G     N +  + 
Sbjct: 125 -VSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEM 183

Query: 93  LDVFQRMN-EIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDL 151
           L+ F  M+   F     + C+    ++AK+F+  + + GL PD ++  + I G  +S D+
Sbjct: 184 LEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDV 243

Query: 152 LGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNV 211
             A  VF+EM  R    N V YN LI G  + G    A  ++ R+  +   YPNV TY  
Sbjct: 244 DSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRM-KDDCCYPNVYTYTA 298

Query: 212 MINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
           +I GLC+     + + + D M +     D  TY S I G C+AG+++ A R+   M E G
Sbjct: 299 LIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG 357

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAI 330
           +  D  TY   ID  C++ +++E   L++ +  +G   NV+ Y++LI G  + GKVDEA 
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG--------------- 375
            ++E +  KNC+ ++ T   LI+GLC  G L +A+ + +++ + G               
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRM 477

Query: 376 --EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             +G   DA   + +M   G K  A T N+ +  +  A K++ A  +  +M  +G  P  
Sbjct: 478 LKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDD 537

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKI-----DMAL 488
            +Y +LI    K+     A+  +K M +   +P   T+  LI  L   + +     +  +
Sbjct: 538 FTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGV 597

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           +    F   G  P   M+ ++        + +  ++L+  M+K  C P+   Y  L+ G+
Sbjct: 598 ESVSNF---GDVPGSNMWKMM--------EFDIVIELFEEMEKHGCTPDSKCYEKLISGI 646

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            K  +   AL++ + + +E + P  + +N  +   C   +  +A   + D +C G  P
Sbjct: 647 CKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 213/409 (52%), Gaps = 22/409 (5%)

Query: 209 YNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV 268
           YN ++  L + G  DE  +++  M +     D +T+   I+  CK G V+ A++   +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 269 ESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNILIRGLLENGKVDE 328
           ++G+  D  T  + I G+CR+  +   F ++E M  +   N VSYN LI GL E G++DE
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR---NEVSYNQLIHGLCEAGRIDE 276

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A+S++  +++  C  +  T+  LI GLC+   ++KA+ +L+E+ E          +LV  
Sbjct: 277 AVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLE---------RNLVPD 326

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           +          T NSL+ G  +A  L++A  L   M  +G  P   +Y   I+ LCK  R
Sbjct: 327 L---------ITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNR 377

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
             EA      + E+G   ++I YS+LI+G C+  K+D A  L  + L K  +P+   +N 
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA 437

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LIHGLCSAG +++AL L+  M K    P + T+N L+  + K GD D A +    ++   
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            +P   +YN  ++  CS  ++ +A + +      G+ P   T+  L++A
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 224/459 (48%), Gaps = 31/459 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR    + A R L+ + E+GL PD  +YG  I+ L KS  +  A  +FD + E GV  NV
Sbjct: 338 CRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANV 397

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y++LIDG+ K G    A  ++E++ +  +  PN  T+N +I+GLC  G   E L ++D
Sbjct: 398 IMYSVLIDGYCKVGKVDEAGCLFEKM-LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFD 456

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
           +M K   +   +T+   I  + K G+ + A +  ++M+ SG    A TYNA I+ +C AG
Sbjct: 457 QMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAG 516

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           K++E  ++   M  +G   +  +Y  LI+   + G    A  + + + + +C     T  
Sbjct: 517 KVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFL 576

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS--------------------LVNRM 389
            LI  L    Y+         VE+ GE  +   ++                    L   M
Sbjct: 577 SLIKQLFDKRYV---------VEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
           +KHGC  ++     L++G  +   L  A+ L  +M ++G SP+ + +N +I+  CK++++
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
           GEA + V++M+  G  P +     LI GL +  + +    +  +    G+  D   + IL
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
           I G+   G VE+  QL+  M+K  C  +  TY+ L   L
Sbjct: 748 IDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 194/394 (49%), Gaps = 25/394 (6%)

Query: 231 RMKKNEREKDSFT-YCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           +M K++  K S   Y   +  L + G V+   ++Y EM+E  + +D  T+N MI+ +C+ 
Sbjct: 146 KMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +KE  +    M + G   +  +    I G   +  VD A  ++E +  +N      ++
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSY 261

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+GLC+                   GR+ +A SL  RM    C  N YT  +L+ G 
Sbjct: 262 NQLIHGLCE------------------AGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGL 303

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            + + +  A+ L  EM  +   P +++YN+LI G C+      AY  +  M E+G  PD 
Sbjct: 304 CRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQ 362

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
            TY   I+ LC+S +++ A +L     ++G + +V MY++LI G C  GKV++A  L+  
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEK 422

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSR 588
           M  +NC PN  T+N L+ GL   G+  +AL +++ +++  L+P + ++NI +  +     
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482

Query: 589 MSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
             DA + L   +  G  P   T++  +    + G
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAG 516


>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 678

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 289/633 (45%), Gaps = 47/633 (7%)

Query: 5   AKRLLNLLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELI 64
            K++  L   ++    AL L D   R  GY      F  I+  L D K          L 
Sbjct: 61  TKKIHLLCTQQRKVDEALTLLDH-LRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLC 119

Query: 65  EIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNE---------------IFGCEAGI 109
               C   E     +I     +  P   L V  R+                 I+ C    
Sbjct: 120 IASDCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQC---- 175

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
            C   Q + A R L  +  +G  P+V ++ +++ G  + G++  A  +FDEM E  V  N
Sbjct: 176 -CEFSQPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPN 234

Query: 170 VVCYNILIDGFFKKGDYMRAKE----IWERLV-METSVYPNVVTYNVMINGLCKCGRFDE 224
            + Y++LI G  ++GD+   +E    +WE +   E +   N   +  +I+ LC+ G  ++
Sbjct: 235 SLTYSVLIRGLLRQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLND 294

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
             ++ + M + +     F Y   I  LC+AG   GA R+   M + G+    V+YN++I 
Sbjct: 295 VFKIAEDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIH 354

Query: 285 GFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNA 343
           G C+       ++L+E     G L +  +Y +L+  L +   +D+A  I E +  K+   
Sbjct: 355 GLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVD 414

Query: 344 DSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNS 403
            +  + + +  LC     N A ++LN               ++  M +  C+ +  T N+
Sbjct: 415 RTRIYNIYLRALCLT---NSATELLN---------------VLVSMLQTECQPDVITLNT 456

Query: 404 LMNGFIQASKLENAIFLFKEMSR-KGCSPTVVSYNTLINGLCKVERFGEAYSFV-KEMLE 461
           ++NGF +  ++E A+ +  +M+  K C+P  V++ T+I GL    R  EA + + K M E
Sbjct: 457 VVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHE 516

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           KG  P + TY+ +I+GL + +  + A++   + L  G   D   Y ++I GLC +G ++ 
Sbjct: 517 KGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDK 576

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
           A +L+ ++   + + +   Y +++ GL + G  D+A      +++  + P+IISYNI + 
Sbjct: 577 AKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVID 636

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHIL 614
             C      +A++ + +    G+ P  +TW IL
Sbjct: 637 SACKLGMKREAYQVVTEMRKNGLTPDAVTWRIL 669



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 224/478 (46%), Gaps = 34/478 (7%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER--LVMETSVYPNVVTYNV 211
           AL + D +   G   + + ++ +I       D  R KE   R  L + +   P+  T NV
Sbjct: 77  ALTLLDHLRLSGYRPDSLNFSSIIHAL---CDAKRFKEAHHRFLLCIASDCVPDERTCNV 133

Query: 212 MINGLCKCGRFDECLEMWDRM--KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
           +I  L         L +  R+   K +       Y  FI+  C+    + A R+  +M+ 
Sbjct: 134 LIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMIS 193

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDE 328
            G   + VT+ +++ G+CR G++   ++L++ M     + N ++Y++LIRGLL  G  + 
Sbjct: 194 RGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEH 253

Query: 329 A----ISIWELLR--EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
                 ++WE ++  EKN + ++     +I+ LC+ G+LN   +I  ++ +G        
Sbjct: 254 GRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKS------ 307

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
              VN+          +    +++   +A K   A  +   M +KG +P++VSYN++I+G
Sbjct: 308 ---VNQ---------EFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHG 355

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCK      AY   +E +E G+ P   TY +L+  LCQ   +D A ++    L K     
Sbjct: 356 LCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDR 415

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
             +YNI +  LC      + L +  +M +  C P+++T NT+++G  K    ++AL I  
Sbjct: 416 TRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILT 475

Query: 563 HILEERL-RPDIISYNITLKGLCSCSRMSDAFEFLNDALC-RGILPTTITWHILVRAV 618
            +   +   PD +++   + GL +  R  +A   L   +  +GI P   T++ ++  +
Sbjct: 476 DMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGL 533



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 58/356 (16%)

Query: 311 VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           ++++ +I  L +  +  EA   + L    +C  D  T  VLI  L  + Y +  + +L  
Sbjct: 94  LNFSSIIHALCDAKRFKEAHHRFLLCIASDCVPDERTCNVLIARLLDSQYPHATLHVLYR 153

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCS 430
           +      +     SL+N              N  +    + S+ + A  L  +M  +G  
Sbjct: 154 L---FHVKPQFVPSLINY-------------NRFIYQCCEFSQPDVAHRLLFDMISRGHC 197

Query: 431 PTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKL 490
           P VV++ +L+ G C+V   G AY    EM E    P+ +TYS+LI GL +    +   +L
Sbjct: 198 PNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEHGREL 257

Query: 491 CCQFLQ-------------------------KGFTPDVT----------------MYNIL 509
            C   +                         +GF  DV                  Y  +
Sbjct: 258 MCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYAHM 317

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I  LC AGK   A ++   MKK+   P+LV+YN+++ GL K   C +A +++   +E   
Sbjct: 318 IDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGY 377

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV-MNNGAS 624
            P   +Y + ++ LC    +  A   +   L +  +  T  ++I +RA+ + N A+
Sbjct: 378 LPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSAT 433


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 252/510 (49%), Gaps = 50/510 (9%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNIL 176
           + A    N L  +   P  + +  ++  LVKS      L++  +M  RG++ N+   NIL
Sbjct: 68  DDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNIL 127

Query: 177 IDGFFKKG----DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           I  F + G       +A    ++LV     + + V+Y  +I+GLCK G     L++  R+
Sbjct: 128 IYCFCQLGLIPCQIHQAFLFHDKLV-ALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                + ++  Y + I+G+CK  +V  A  +Y EMV  GI  + VTY+A+I GF   GK+
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 293 KECFELW-EVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           K+  +L+ +++      +  ++NIL+ G  ++ K+ E  +++ ++ ++    D  T+  L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++G C    +N A  I N + +GG          VN        + +Y  N L+NGF + 
Sbjct: 307 MDGYCLVKEVNTAKSIFNTMAQGG----------VNP------DIRSY--NILINGFCKI 348

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
            K++ A+ LF EM  K   P VV+YN+LI+GL K  R   A   V +M ++G  P+++TY
Sbjct: 349 KKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTY 408

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTP------------------DVTM--YNILIH 511
           + +I+ L ++ ++D A+ L  +F  +G  P                  D+T+  YN++IH
Sbjct: 409 NSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIH 468

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G C  G  ++AL L S MK  +C+PN VTY   +  L    + DKA +++  ++   L  
Sbjct: 469 GFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLN 528

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALC 601
              SY       CS  ++  +   +    C
Sbjct: 529 RSASYP------CSSMKIHQSLTMVQHTWC 552



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 44/481 (9%)

Query: 166 VETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            + N + Y+     F    D   A  ++ RL+ +    P    +N ++  L K   +   
Sbjct: 47  TKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPT-PPAFEFNKILGSLVKSKHYHTV 105

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAG----NVEGAERVYREMVESGIFVDAVTYNA 281
           L +  +M+    + + F     I+  C+ G     +  A   + ++V  G  +D V+Y  
Sbjct: 106 LSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGT 165

Query: 282 MIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKN 340
           +I G C+ G+ +   +L + V G+   LN V YN +I G+ ++  V++A  ++  +  K 
Sbjct: 166 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225

Query: 341 CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYT 400
            + +  T+  LI+G                      G+L DA  L N++     K + YT
Sbjct: 226 ISPNVVTYSALISGFFV------------------VGKLKDAIDLFNKIILENIKPDGYT 267

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L++GF +  K++    +F  M ++G  P VV+YN+L++G C V+    A S    M 
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMA 327

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           + G  PD+ +Y++LING C+ KK+D A+ L  +   K   P+V  YN LI GL  +G++ 
Sbjct: 328 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 387

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            ALQL   M  R   PN++TYN+++D LFKT   DKA+ +     ++ ++P + +Y I +
Sbjct: 388 YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 447

Query: 581 KGLCS------------------CSR--MSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            GLC                   C +    +A   L+       +P  +T+ I +R++++
Sbjct: 448 DGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLD 507

Query: 621 N 621
           N
Sbjct: 508 N 508



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 241/522 (46%), Gaps = 62/522 (11%)

Query: 21  ALALFDSATRE----PGYAHSPHLFHHILRRLIDPK---LVVHVSRILELIEIQK----- 68
           A++LF+   R+    P +      F+ IL  L+  K    V+ +S+ +E   I+      
Sbjct: 70  AVSLFNRLLRQNPTPPAFE-----FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124

Query: 69  ---CYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEI-FGCEAGILCRKRQFEKAKRFLN 124
               YC   + L   Q +      DK + +   ++++ +G     LC+  +   A   L 
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 125 SLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKG 184
            +  K ++ +   Y TVI G+ K   +  A  ++ EM  +G+  NVV Y+ LI GFF  G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 185 DYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTY 244
               A +++ ++++E ++ P+  T+N++++G CK  +  E   ++  M K     D  TY
Sbjct: 245 KLKDAIDLFNKIILE-NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 303

Query: 245 CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
            S + G C    V  A+ ++  M + G+  D  +YN +I+GFC+  K+ +   L+  M  
Sbjct: 304 NSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 363

Query: 305 KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
           K  + NVV+YN LI GL ++G++  A+ + + + ++    +  T+  +I+ L K   ++K
Sbjct: 364 KNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 423

Query: 364 AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
           AI                  +L+ +    G + + YT   L++G  +             
Sbjct: 424 AI------------------ALITKFKDQGIQPSMYTYTILIDGLCKV------------ 453

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
              +G   TV +YN +I+G CK   F EA S + +M +    P+ +TY + I  L  + +
Sbjct: 454 ---EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D A KL  + + +G       Y       CS+ K+  +L +
Sbjct: 511 NDKAEKLFREMITRGLLNRSASYP------CSSMKIHQSLTM 546



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 163/336 (48%), Gaps = 21/336 (6%)

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
           +N +SY+        N  VD+A+S++  L  +N    +     ++  L K+ + +  + +
Sbjct: 49  INFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSL 108

Query: 368 LNEVEEGG---------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
             ++E  G                       ++  A    +++   G  L+  +  +L++
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIH 168

Query: 407 GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKP 466
           G  +  +   A+ L + +  K      V YNT+I G+CK +   +A+    EM+ KG  P
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228

Query: 467 DMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY 526
           +++TYS LI+G     K+  A+ L  + + +   PD   +NIL+ G C   K+++   ++
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288

Query: 527 SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSC 586
           + M K+  +P++VTYN+LMDG     + + A  I+N + +  + PDI SYNI + G C  
Sbjct: 289 AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKI 348

Query: 587 SRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            ++  A    N+  C+ I+P  +T++ L+  +  +G
Sbjct: 349 KKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSG 384


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 241/507 (47%), Gaps = 29/507 (5%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R+ +  W     P+V+     +    +  D   A  V   M  RGV      +  L+  +
Sbjct: 115 RWADRQWRYRHAPEVFDEMLSLLSNTRLHD--PARRVVRLMIRRGVRRGTEQFAQLMLSY 172

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + G    A  +   L+ +    P++   N+ +N L   GR D+ LE  +RM++   E D
Sbjct: 173 SRAGKLRSAMRVLH-LMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPD 231

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +TY   I GLC A  V  A  +   M+++G   D ++Y  ++   C+  +++E   L +
Sbjct: 232 VYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQ 291

Query: 301 VMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLRE---KNCNADSTTHGVLINGL 355
            M     L  + V+YN+LI GL ++G  DEA+   E LRE   K    D   +  +++  
Sbjct: 292 RMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL---EFLRESEGKRFRVDEVGYSAIVHSF 348

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C NG                  R+A+A  +V  M   GC+ +  T +++++GF +  +L+
Sbjct: 349 CLNG------------------RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELD 390

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  + K M +  C P  V++  L+NGLCKV +  EA+  + +  E+ W P  ITYS+++
Sbjct: 391 QARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVM 450

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +G  +  K+  +  +  Q LQKGF P     N+LIH LC   K  +A       + + C 
Sbjct: 451 HGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCT 510

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            N+V + T++ G  + GD + AL + + +      PD+++Y + +  L    R+ +A   
Sbjct: 511 INVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGL 570

Query: 596 LNDALCRGILPTTITWHILVRAVMNNG 622
           +   L RG+LPT +T+  ++      G
Sbjct: 571 VEKMLNRGVLPTPVTYRTVIHRYCEKG 597



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 149/604 (24%), Positives = 279/604 (46%), Gaps = 38/604 (6%)

Query: 2   VISAKRLLNLLKAEK--NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           V+S  ++  +L+A+   +   A   F  A R+  Y H+P +F  +L  L + +L     R
Sbjct: 89  VLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARR 148

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------L 110
           ++ L+  +      +    ++ +Y +      A+ V   M +  GC   I         L
Sbjct: 149 VVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKD-GCAPDISICNMAVNVL 207

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
               + +KA  F   +   G++PDVY+Y  +I GL  +  ++ A+ +   M + G   + 
Sbjct: 208 VVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDK 267

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  ++    K+      + + +R+  +  ++P+ VTYNV+I+GL K G  DE LE   
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLR 327

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D   Y + +H  C  G +  A+ +  EM+  G   D VTY+ ++DGFCR G
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELL---REKNCNADST 346
           ++ +  ++ + M +  C  N V++  L+ GL + GK  EA   WELL    E+       
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA---WELLNKSEEEWWTPSDI 444

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+ V+++G  + G L ++  ++ ++ + G                 + + A+A   + + 
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC +N     ++++GF +   LE+A+ L  +M      P VV+Y  +++ L K  R 
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   V++ML +G  P  +TY  +I+  C+   ++  L L  + L +      + YN +
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMK--SAYNQV 622

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  LC+ GK+ +A  L   + +   V +  T + LM+     G   +A  +   +    L
Sbjct: 623 VEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNL 682

Query: 570 RPDI 573
            PD+
Sbjct: 683 IPDV 686



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 252/562 (44%), Gaps = 54/562 (9%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           ++   E+F     +L   R  + A+R +  +  +G++     +  ++    ++G L  A+
Sbjct: 123 YRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAM 182

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            V   M + G   ++   N+ ++     G   +A E  ER+     V P+V TYN +I G
Sbjct: 183 RVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM-RRVGVEPDVYTYNCLIKG 241

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFV 274
           LC   R  + +EM   M +N    D  +Y + +  LCK   VE    + + M  ++G+F 
Sbjct: 242 LCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFP 301

Query: 275 DAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           D VTYN +I G  + G   E  E L E  G++  ++ V Y+ ++     NG++ EA  I 
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIV 361

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             +  K C  D  T+  +++G C+ G L++                  A  ++  M K+ 
Sbjct: 362 GEMISKGCQPDVVTYSTVVDGFCRIGELDQ------------------ARKMMKHMYKND 403

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           CK N  T  +L+NG  +  K   A  L  +   +  +P+ ++Y+ +++G  +  +  E+ 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             V +ML+KG+ P  +  +LLI+ LC+ +K   A     Q   KG T +V  +  +IHG 
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              G +E AL L  +M   N  P++VTY  ++D L K G   +A  +   +L   + P  
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583

Query: 574 IS---------------------------------YNITLKGLCSCSRMSDAFEFLNDAL 600
           ++                                 YN  ++ LC+  ++++A+  L   L
Sbjct: 584 VTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643

Query: 601 CRGILPTTITWHILVRAVMNNG 622
               +    T HIL+ + +N G
Sbjct: 644 RTASVRDAQTCHILMESFLNRG 665


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 240/500 (48%), Gaps = 29/500 (5%)

Query: 121 RFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGF 180
           R+ +  W     P+V+     +    +  D   A  V   M  RGV      +  L+  +
Sbjct: 115 RWADRQWRYRHAPEVFDEMLSLLSNTRLHD--PARRVVRLMIRRGVRRGTEQFAQLMLSY 172

Query: 181 FKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKD 240
            + G    A  +   L+ +    P++   N+ +N L   GR D+ LE  +RM++   E D
Sbjct: 173 SRAGKLRSAMRVLH-LMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPD 231

Query: 241 SFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE 300
            +TY   I GLC A  V  A  +   M+++G   D ++Y  ++   C+  +++E   L +
Sbjct: 232 VYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQ 291

Query: 301 VMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLRE---KNCNADSTTHGVLINGL 355
            M     L  + V+YN+LI GL ++G  DEA+   E LRE   K    D   +  +++  
Sbjct: 292 RMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL---EFLRESEGKRFRVDEVGYSAIVHSF 348

Query: 356 CKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           C NG                  R+A+A  +V  M   GC+ +  T +++++GF +  +L+
Sbjct: 349 CLNG------------------RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELD 390

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A  + K M +  C P  V++  L+NGLCKV +  EA+  + +  E+ W P  ITYS+++
Sbjct: 391 QARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVM 450

Query: 476 NGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCV 535
           +G  +  K+  +  +  Q LQKGF P     N+LIH LC   K  +A       + + C 
Sbjct: 451 HGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCT 510

Query: 536 PNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEF 595
            N+V + T++ G  + GD + AL + + +      PD+++Y + +  L    R+ +A   
Sbjct: 511 INVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGL 570

Query: 596 LNDALCRGILPTTITWHILV 615
           +   L RG+LPT +T+  ++
Sbjct: 571 VEKMLNRGVLPTPVTYRTVI 590



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 149/604 (24%), Positives = 279/604 (46%), Gaps = 38/604 (6%)

Query: 2   VISAKRLLNLLKAEK--NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSR 59
           V+S  ++  +L+A+   +   A   F  A R+  Y H+P +F  +L  L + +L     R
Sbjct: 89  VLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARR 148

Query: 60  ILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGI---------L 110
           ++ L+  +      +    ++ +Y +      A+ V   M +  GC   I         L
Sbjct: 149 VVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKD-GCAPDISICNMAVNVL 207

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
               + +KA  F   +   G++PDVY+Y  +I GL  +  ++ A+ +   M + G   + 
Sbjct: 208 VVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDK 267

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  ++    K+      + + +R+  +  ++P+ VTYNV+I+GL K G  DE LE   
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLR 327

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
             +      D   Y + +H  C  G +  A+ +  EM+  G   D VTY+ ++DGFCR G
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387

Query: 291 KIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELL---REKNCNADST 346
           ++ +  ++ + M +  C  N V++  L+ GL + GK  EA   WELL    E+       
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA---WELLNKSEEEWWTPSDI 444

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRM 389
           T+ V+++G  + G L ++  ++ ++ + G                 + + A+A   + + 
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              GC +N     ++++GF +   LE+A+ L  +M      P VV+Y  +++ L K  R 
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   V++ML +G  P  +TY  +I+  C+   ++  L L  + L +      + YN +
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMK--SAYNQV 622

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           +  LC+ GK+ +A  L   + +   V +  T + LM+     G   +A  +   +    L
Sbjct: 623 VEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNL 682

Query: 570 RPDI 573
            PD+
Sbjct: 683 IPDV 686



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/622 (24%), Positives = 275/622 (44%), Gaps = 71/622 (11%)

Query: 45  LRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKNSMPDKALDVFQ------- 97
           LR    PKL   + ++L ++       P  V  +V++A  +  +  +A + F+       
Sbjct: 71  LRESWSPKLEAQLRQLLRVLS------PPQVR-AVLRAQARGDV-RRAFEFFRWADRQWR 122

Query: 98  --RMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
                E+F     +L   R  + A+R +  +  +G++     +  ++    ++G L  A+
Sbjct: 123 YRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAM 182

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            V   M + G   ++   N+ ++     G   +A E  ER+     V P+V TYN +I G
Sbjct: 183 RVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM-RRVGVEPDVYTYNCLIKG 241

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMV-ESGIFV 274
           LC   R  + +EM   M +N    D  +Y + +  LCK   VE    + + M  ++G+F 
Sbjct: 242 LCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFP 301

Query: 275 DAVTYNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
           D VTYN +I G  + G   E  E L E  G++  ++ V Y+ ++     NG++ EA  I 
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIV 361

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHG 393
             +  K C  D  T+  +++G C+ G L++                  A  ++  M K+ 
Sbjct: 362 GEMISKGCQPDVVTYSTVVDGFCRIGELDQ------------------ARKMMKHMYKND 403

Query: 394 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAY 453
           CK N  T  +L+NG  +  K   A  L  +   +  +P+ ++Y+ +++G  +  +  E+ 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 454 SFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGL 513
             V +ML+KG+ P  +  +LLI+ LC+ +K   A     Q   KG T +V  +  +IHG 
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523

Query: 514 CSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI 573
              G +E AL L  +M   N  P++VTY  ++D L K G   +A  +   +L   + P  
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583

Query: 574 IS---------------------------------YNITLKGLCSCSRMSDAFEFLNDAL 600
           ++                                 YN  ++ LC+  ++++A+  L   L
Sbjct: 584 VTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643

Query: 601 CRGILPTTITWHILVRAVMNNG 622
               +    T HIL+ + +N G
Sbjct: 644 RTASVRDAQTCHILMESFLNRG 665


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 237/491 (48%), Gaps = 24/491 (4%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFE-RGVETNVVCYNILIDGFFKKG 184
           L  +   P V +   ++  L ++G+L     VFDEM + + V  N   Y  +I    K G
Sbjct: 184 LSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVG 243

Query: 185 DYMRAKEIWERLV---METSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
                 +I   L+   ++ S     V YN++++ LCK GR DE + +  RM+++      
Sbjct: 244 KVDDGFKILSDLIHAGLQQSA--GAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSM 301

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-E 300
            T+   I+GL ++        + REM   GI  + V  N +ID  CR G   E   L+ E
Sbjct: 302 VTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDE 361

Query: 301 VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           ++ ++     V+YN++ R L + G+++ A    E + E+  +   T H  L N +   G 
Sbjct: 362 MVSKEMKSTAVTYNLIARALCKEGEMERA----ERILEEMLSTGMTIHSGLFNSVVA-GL 416

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L +             GRL     L++ M K G K N     +      Q  + + A+ +
Sbjct: 417 LQRT------------GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGI 464

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           + +M  KG    + + N LI+GLC+ +    A   ++ M+ KG + D ITY+++I G C+
Sbjct: 465 WLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCK 524

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
             KI+ ALKL    ++KGF PD  M+N +IH  C  GK+E+AL L   MK     P++V+
Sbjct: 525 DSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVS 584

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y T++DG  K  D  KA E  N ++   L+P+ + YN  + G      +S A   L+   
Sbjct: 585 YGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTME 644

Query: 601 CRGILPTTITW 611
             GI PT +T+
Sbjct: 645 SIGIQPTNVTY 655



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 243/508 (47%), Gaps = 21/508 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+  + ++A R    + E  + P + ++G +INGL +S       A+  EM   G+  N
Sbjct: 276 LCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPN 335

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V  N LID   +KG +  A  +++ +V +  +    VTYN++   LCK G  +    + 
Sbjct: 336 EVICNELIDWHCRKGHFTEAIRLFDEMVSK-EMKSTAVTYNLIARALCKEGEMERAERIL 394

Query: 230 DRMKKNEREKDSFTYCSFIHGLC-KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
           + M        S  + S + GL  + G +E   R+  EMV+ G+  +     A     C+
Sbjct: 395 EEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQ 454

Query: 289 AGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
             + +E   +W  M  KG C+N+ + N LI GL E   +  A  +   +  K    D+ T
Sbjct: 455 GRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNIT 514

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
           + ++I G CK+  + +A+++ ++                  M + G K +AY  NS+++ 
Sbjct: 515 YNIMIQGCCKDSKIEEALKLRDD------------------MIRKGFKPDAYMFNSIIHA 556

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
           +    K+E A+ L  +M  +G  P VVSY T+I+G CK +   +A  ++ E++  G KP+
Sbjct: 557 YCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPN 616

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
            + Y+ LI G  ++  I  A+ +       G  P    Y  L+H +C AG V++A  ++ 
Sbjct: 617 AVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFE 676

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
             +K +    +V Y  ++ GL K G  D+A+  +  +    + P+ I+Y   +   C   
Sbjct: 677 QSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSG 736

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILV 615
              +A +  ++ +  GI+P  ++++ LV
Sbjct: 737 NNEEASKLFDEMVSSGIVPDNVSYNTLV 764



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 247/533 (46%), Gaps = 58/533 (10%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV--VCYNILIDGFFKKGDY 186
           K + P+ YSY ++I  L K G +     +  ++   G++ +   V YN+L+D   K G  
Sbjct: 223 KTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRV 282

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGL------------------------------ 216
             A  +  R+  E+ V P++VT+ ++INGL                              
Sbjct: 283 DEAIRLKGRM-EESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNE 341

Query: 217 -----CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESG 271
                C+ G F E + ++D M   E +  + TY      LCK G +E AER+  EM+ +G
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401

Query: 272 IFVDAVTYNAMIDGFC-RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEA 329
           + + +  +N+++ G   R G+++    L   M ++G   N        + L +  +  EA
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461

Query: 330 ISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRM 389
           + IW  + EK    +  T   LI+GLC+   +  A ++L               ++VN+ 
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLR--------------TMVNK- 506

Query: 390 DKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERF 449
              G +L+  T N ++ G  + SK+E A+ L  +M RKG  P    +N++I+  C + + 
Sbjct: 507 ---GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKM 563

Query: 450 GEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            EA   + +M  +G +PD+++Y  +I+G C++K I  A +   + +  G  P+  +YN L
Sbjct: 564 EEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNAL 623

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I G    G +  A+ +   M+     P  VTY +LM  +   G  D+A  ++    +  +
Sbjct: 624 IGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSI 683

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
              ++ Y I ++GLC   +M +A  +  +   R I P  IT+  L+ A   +G
Sbjct: 684 EVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSG 736



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 245/526 (46%), Gaps = 29/526 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           ++ A  K+   D+A+ +  RM E         FG     L R  +F +    L  +   G
Sbjct: 272 LMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLG 331

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+      +I+   + G    A+ +FDEM  + +++  V YN++     K+G+  RA+
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAE 391

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLC-KCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            I E + + T +  +   +N ++ GL  + GR +  + +   M K   + +     +   
Sbjct: 392 RILEEM-LSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-L 308
            LC+    + A  ++ +M+E G+ ++  T NA+I G C    +K   E+   M  KG  L
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           + ++YNI+I+G  ++ K++EA+ + + +  K    D+     +I+  C  G + +A+ +L
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
            +                  M   G + +  +  ++++G+ +A  ++ A     E+   G
Sbjct: 571 GQ------------------MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACG 612

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMAL 488
             P  V YN LI G  +      A   +  M   G +P  +TY  L++ +C +  +D A 
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAK 672

Query: 489 KLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGL 548
            +  Q  +      V  Y I+I GLC  GK+++A+  +  M+ R+  PN +TY TLM   
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732

Query: 549 FKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFE 594
            K+G+ ++A ++++ ++   + PD +SYN  + G      +  A E
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 19/371 (5%)

Query: 107 AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
           AG+L R  + E   R ++ + ++G+KP+          L +      A+ ++ +M E+G+
Sbjct: 414 AGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGL 473

Query: 167 ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
             N+   N LI G  +  +   A E+   +V +     N+ TYN+MI G CK  + +E L
Sbjct: 474 CINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI-TYNIMIQGCCKDSKIEEAL 532

Query: 227 EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
           ++ D M +   + D++ + S IH  C  G +E A  +  +M   G+  D V+Y  +IDG+
Sbjct: 533 KLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGY 592

Query: 287 CRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+A  I++  E L E+M      N V YN LI G   NG +  AI + + +        +
Sbjct: 593 CKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTN 652

Query: 346 TTHGVLINGLCKNGYLNKAIQIL-----NEVEEG------------GEGRLADAASLVNR 388
            T+  L++ +C  G +++A  +      N +E G              G++ +A +    
Sbjct: 653 VTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEE 712

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M       N  T  +LM  + ++   E A  LF EM   G  P  VSYNTL+ G  +V+ 
Sbjct: 713 MRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDS 772

Query: 449 FGEAYSFVKEM 459
             +A     E+
Sbjct: 773 LDKAIEKAAEI 783



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 159/334 (47%), Gaps = 19/334 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+ R+ ++A      + EKGL  ++ +   +I+GL +  ++ GA  V   M  +G+E +
Sbjct: 452 LCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELD 511

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            + YNI+I G  K      A ++ + ++ +    P+   +N +I+  C  G+ +E L + 
Sbjct: 512 NITYNIMIQGCCKDSKIEEALKLRDDMIRK-GFKPDAYMFNSIIHAYCDLGKMEEALHLL 570

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            +MK    + D  +Y + I G CKA +++ A     E++  G+  +AV YNA+I G+ R 
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630

Query: 290 GKIKECFELWEVMGRKGCLNV-VSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I     + + M   G     V+Y  L+  +   G VDEA +++E  R+ +       +
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGY 690

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
            ++I GLCK G +++A+    E+                      G   +A+ L + M  
Sbjct: 691 TIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVS 750

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
            G   +  + N+L+ GF Q   L+ AI    E+S
Sbjct: 751 SGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEIS 784


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 259/533 (48%), Gaps = 22/533 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR  +  +    L  +  K + P+  SY T+ING VK G +  A  VF+EM E  +  N
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETS-VYPNVVTYNVMINGLCKCGRFDECLEM 228
           ++ YNILI+G+   G++  A  + +  VME + V PN VT   ++NGL K  +FD    +
Sbjct: 315 LITYNILINGYCINGNFEEALRVLD--VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 229 WDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCR 288
            +R   N    +  ++   I GLC+ G ++ A ++  EM + G+  D +T++ +I+GFC+
Sbjct: 373 LERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCK 432

Query: 289 AGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
            G I +  E+   + R+G + N V ++ LI    + G V EA+  +  +     NAD+ T
Sbjct: 433 VGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFT 492

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMD 390
              L+  LC+NG L +A + L+ +   G                  G  + A S+ +RM 
Sbjct: 493 CNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMI 552

Query: 391 KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFG 450
             G   + +T  SL+    +      A  L K++     +   +SYNTLI  + K     
Sbjct: 553 SCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLL 612

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG-FTPDVTMYNIL 509
           EA    +EM++    PD  TY+ +++GL +  ++  A     + +QK   T +  +Y   
Sbjct: 613 EAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCF 672

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GL  AG+ + AL L+  M+++    +L+  N++ DG  + G    A  + +    + +
Sbjct: 673 IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNV 732

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            P++ ++NI L G      +   F+  N     G  P  +T+H L+  + N+G
Sbjct: 733 IPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 254/541 (46%), Gaps = 40/541 (7%)

Query: 97  QRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEK--------GLKPDVYS--------YGT 140
             +  I G    +L + R +  AK  L  L +K        G+  D Y         +  
Sbjct: 51  NHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDL 110

Query: 141 VINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE--RLVM 198
           +I   ++ G +  A+  F  M  RG + +V   N+++    K     RA  +W   + ++
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN---CRAHLVWSFFKQML 167

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
            + V PNV ++N++I+ LC  G+  + + +   M++N       +Y + +   CK G  +
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A  +   M   GI  D  TYN  ID  CR  +  + + + + M  K    N VSYN LI
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            G ++ GK+  A  ++  + E N + +  T+ +LING C NG   +A+++L+        
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDV------- 340

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      M+ +  + N  T  +L+NG  +++K + A  + +       S   +S+ 
Sbjct: 341 -----------MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHT 389

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I+GLC+     EA+  + EM + G  PD+IT+S+LING C+   I+ A ++  +  ++
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYRE 449

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           GF P+  +++ LI+  C  G V +A++ Y+ M       +  T N+L+  L + G   +A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509

Query: 558 LEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRA 617
            E  +HI    L P+ ++++  + G  +    S AF   +  +  G  P+  T+  L++ 
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKV 569

Query: 618 V 618
           +
Sbjct: 570 L 570



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 245/555 (44%), Gaps = 58/555 (10%)

Query: 103  FGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDE 160
            F C + +  LC   +  +A+ FL+ +   GL P+  ++  +ING    GD  GA +VFD 
Sbjct: 491  FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDR 550

Query: 161  M---------FERGVETNVVC--------------------------YNILIDGFFKKGD 185
            M         F  G    V+C                          YN LI    K G+
Sbjct: 551  MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGN 610

Query: 186  YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR-MKKNEREKDSFTY 244
             + A  ++E ++ + ++ P+  TY  +++GL + GR         R M+K     +S  Y
Sbjct: 611  LLEAVRLFEEMI-QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVY 669

Query: 245  CSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGR 304
              FI GL KAG  + A  +++EM E G+ +D +  N++ DG+ R GK+     L      
Sbjct: 670  TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 305  KGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNK 363
            K  + N+ ++NIL+ G      +     ++ L+R      +  T+  LI GLC +G L  
Sbjct: 730  KNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLEL 789

Query: 364  AIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
             I++L          +A+++++           +  T N L+    + + L+  I L   
Sbjct: 790  GIKMLKMF-------IAESSTI-----------DDLTFNMLIRKCCEINDLDKVIDLTHN 831

Query: 424  MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
            M     S    +   + + L +       + F+ EML+KG+ P    Y  ++  +C+   
Sbjct: 832  MEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGD 891

Query: 484  IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
            I  A KL  Q +  G + D      ++ GL   GK+E+A+ +   M +   +P   T+ T
Sbjct: 892  IQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTT 951

Query: 544  LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
            LM    K  +  +A  +   +   R++ DI++YN+ +   C+   +  A +F  +   +G
Sbjct: 952  LMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKG 1011

Query: 604  ILPTTITWHILVRAV 618
            +LP   T+ +LV A+
Sbjct: 1012 LLPNMTTYRVLVSAI 1026



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/576 (23%), Positives = 261/576 (45%), Gaps = 34/576 (5%)

Query: 79  VIQAYGKNSMPDKALDVFQRM------NEIFGCEA--GILCRKRQFEKAKRFLNSLWEKG 130
           +I+ Y +  M   A++ F  M        ++ C      + +  +      F   +    
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170

Query: 131 LKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAK 190
           + P+V S+  +I+ L   G L  A+ +   M   G    +V YN L+    KKG +  A 
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
            +   +  +  +  +V TYN+ I+ LC+  R  +   +  +M+      +  +Y + I+G
Sbjct: 231 VLIHHMECK-GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLING 289

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-N 309
             K G +  A RV+ EM+E  +  + +TYN +I+G+C  G  +E   + +VM       N
Sbjct: 290 FVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPN 349

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+   L+ GL ++ K D A +I E       + +  +H V+I+GLC+NG L++A Q+L 
Sbjct: 350 EVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 370 EVEEGGE-----------------GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQAS 412
           E+ + G                  G +  A  +++++ + G   N    ++L+    +  
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVG 469

Query: 413 KLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYS 472
            +  A+  +  M+  G +    + N+L+  LC+  +  EA  F+  +   G  P+ +T+ 
Sbjct: 470 NVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFD 529

Query: 473 LLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKR 532
            +ING         A  +  + +  G  P    Y  L+  LC      +A +L   +KK 
Sbjct: 530 CIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL---LKKL 586

Query: 533 NCVP---NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRM 589
           +C+P   + ++YNTL+  + K+G+  +A+ ++  +++  + PD  +Y   L GL    R+
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646

Query: 590 SDAFEFLNDALCRGILP-TTITWHILVRAVMNNGAS 624
             AF FL   + + IL   +I +   +  +   G S
Sbjct: 647 VCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQS 682



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/560 (23%), Positives = 238/560 (42%), Gaps = 36/560 (6%)

Query: 56   HVSRILELIEIQKCYCPEDVALS-VIQAYGKNSMPDKALDVFQRMNE--------IFGCE 106
            H+SRI           P  V    +I  Y        A  VF RM           +G  
Sbjct: 515  HISRI--------GLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSL 566

Query: 107  AGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGV 166
              +LC+ + F +A++ L  L    L  D  SY T+I  + KSG+LL A+ +F+EM +  +
Sbjct: 567  LKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNI 626

Query: 167  ETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECL 226
              +   Y  ++ G  ++G  + A     RL+ +  +  N + Y   I+GL K G+    L
Sbjct: 627  LPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAAL 686

Query: 227  EMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGF 286
             ++  M++     D     S   G  + G V  A  +  +     +  +  T+N ++ G+
Sbjct: 687  YLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGY 746

Query: 287  CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
             R   I  CF+L+ +M R G   N ++Y+ LI GL  +G ++  I + ++   ++   D 
Sbjct: 747  SRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDD 806

Query: 346  TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
             T  +LI   C+   L+K I                   L + M+     L+  T  ++ 
Sbjct: 807  LTFNMLIRKCCEINDLDKVID------------------LTHNMEVFRVSLDKDTQKAVT 848

Query: 406  NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            +  ++    +N      EM +KG  PT   Y T++  +C+V     A+    +M+  G  
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908

Query: 466  PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
             D      ++ GL    KI+ A+ +  + L+    P  + +  L+H  C     ++A  L
Sbjct: 909  LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968

Query: 526  YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
               M+      ++V YN L+      GD   AL+ +  I ++ L P++ +Y + +  + +
Sbjct: 969  KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIST 1028

Query: 586  CSRMSDAFEFLNDALCRGIL 605
               +S     L D   RG++
Sbjct: 1029 KHYVSRGEIVLKDLNDRGLV 1048



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMI----------------TYSLLINGLCQSKKIDM 486
           L K   +G A S +K + +K    + +                 + LLI    +   +  
Sbjct: 64  LVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGH 123

Query: 487 ALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           A+      L +GF P V   N+++  +    +       +  M      PN+ ++N L+ 
Sbjct: 124 AVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILIS 183

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILP 606
            L   G   KA+ I   +      P I+SYN  L   C   R   A   ++   C+GI  
Sbjct: 184 VLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQA 243

Query: 607 TTITWHILVRAVMNNGAST 625
              T+++ + ++  N  S 
Sbjct: 244 DVCTYNMFIDSLCRNSRSA 262


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 232/477 (48%), Gaps = 20/477 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR +        L ++++ GL+P V +   +INGL   G++  A+ + D M +     +
Sbjct: 122 LCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLD 181

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  Y +LI+G  K GD + A E W R + E +  PNVV Y+ +++GLCK G   E L + 
Sbjct: 182 VYTYGVLINGLCKTGDTLAAVE-WLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M       +  TY   I GLC  G  +    +  EM++ G+ +D  T N ++D FC+ 
Sbjct: 241 SEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKE 300

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK+ +   +   M   G   +V +YN LI       K++EA+ ++ L+  + C  D    
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVF 360

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK+  +NK + +L E                  M K G   +  T  +L+ GF
Sbjct: 361 TSLIHGWCKDKNINKVMHLLEE------------------MAKMGFVPDVVTWTTLIGGF 402

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            QA +   A  LF  M + G  P + +   +++GLCK     EA S  + M +     ++
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNI 462

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + YS+L++G+C + K++ A +L      KG   +V  Y I+I GLC  G ++ A  L  N
Sbjct: 463 VIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLIN 522

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           M++  C+P+  TYN  + GL    +  ++++    + ++    D  +  IT+  L +
Sbjct: 523 MEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLST 579



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 254/547 (46%), Gaps = 64/547 (11%)

Query: 84  GKNSMPDKALDVFQRMNEI--------FGCEAGILCRKRQFEKAKRFLNSLWEK-GLKPD 134
           GK    D+ALD+FQ M  +        F    G++ R + +  A   +  ++   G++ D
Sbjct: 52  GKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEAD 111

Query: 135 VYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWE 194
             +   VIN L +   +    +V   MF+ G+E                           
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLE--------------------------- 144

Query: 195 RLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
                    P V+T   +INGLC  G   + + + D M+K     D +TY   I+GLCK 
Sbjct: 145 ---------PTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKT 195

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
           G+   A    R+M E     + V Y+ ++DG C+ G + E   L   M  KG   N+V+Y
Sbjct: 196 GDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTY 255

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
             LI+GL   G+  E  S+ + + +     D  T  +L++  CK                
Sbjct: 256 ACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCK---------------- 299

Query: 374 GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTV 433
             EG++  A S++  M   G   + +T NSL++ +   +K+  A+ +F  M  +GC P +
Sbjct: 300 --EGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDI 357

Query: 434 VSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQ 493
           V + +LI+G CK +   +    ++EM + G+ PD++T++ LI G CQ+ +   A +L   
Sbjct: 358 VVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLN 417

Query: 494 FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGD 553
             + G  P++    +++ GLC    + +A+ L   M+K N   N+V Y+ L+DG+   G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 554 CDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHI 613
            + A E+++ +  + L+ ++ +Y I +KGLC    +  A + L +    G LP   T+++
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537

Query: 614 LVRAVMN 620
            V+ ++ 
Sbjct: 538 FVQGLLT 544



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 233/498 (46%), Gaps = 26/498 (5%)

Query: 134 DVYSYGT----VINGLVKSG---DLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDY 186
           D +S GT     +  L KSG   ++  AL +F  M       +V  + +L+    +   Y
Sbjct: 33  DSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHY 92

Query: 187 MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCS 246
             A  + + +     +  + +T N++IN LC+         +   M K   E    T  +
Sbjct: 93  TTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTA 152

Query: 247 FIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFE-LWEVMGRK 305
            I+GLC  GNV  A  +   M +    +D  TY  +I+G C+ G      E L ++  R 
Sbjct: 153 LINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN 212

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
              NVV Y+ ++ GL ++G V EA+++   +  K    +  T+  LI GLC         
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCN-------- 264

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                      GR  +  SL++ M K G +L+  T N L++ F +  K+  A  +   M 
Sbjct: 265 ----------FGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMI 314

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P V +YN+LI+  C   +  EA      M+ +G  PD++ ++ LI+G C+ K I+
Sbjct: 315 LTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNIN 374

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
             + L  +  + GF PDV  +  LI G C AG+   A +L+ NM K   VPNL T   ++
Sbjct: 375 KVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVIL 434

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           DGL K     +A+ +   + +  L  +I+ Y+I L G+CS  +++ A+E  +    +G+ 
Sbjct: 435 DGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQ 494

Query: 606 PTTITWHILVRAVMNNGA 623
               T+ I+++ +   G+
Sbjct: 495 INVYTYTIMIKGLCKQGS 512


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 227/464 (48%), Gaps = 31/464 (6%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           +++F   +   G+K  V++Y  +I+ L K GDL  A ++F +M E G   ++V YN LID
Sbjct: 40  SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 99

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           G  K G       I+E++  +    P+V+TYN +IN  CK  R  +  E    MK N  +
Sbjct: 100 GHGKLGLLDECICIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 158

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +  TY +FI   CK G ++ A + + +M    +  +  TY ++ID  C+AG + E  +L
Sbjct: 159 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 218

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            E + + G  LNVV+Y  L+ GL E G++ EA  ++  +       +  T+  L++G  K
Sbjct: 219 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 278

Query: 358 NGYLNKAIQILNEVEEG-----------------GEGRLADAASLVNRMDKHGCKLNAYT 400
              +  A  IL E++E                   E RL +A  L+  + + G   NA  
Sbjct: 279 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 338

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
             +LM+ + ++ +   A+ L +EM              L++GLCK   F  A     EML
Sbjct: 339 YTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNCFEVAKKLFDEML 386

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           +KG  PD I Y+ LI+G  +   +  AL L  + ++ G   D+  Y  LI GL  +G+V+
Sbjct: 387 DKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQ 446

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            A  L   M  +  +P+ V Y  L+   +  G  D+ALE+ N +
Sbjct: 447 KARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 490



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 235/491 (47%), Gaps = 46/491 (9%)

Query: 146 VKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPN 205
           V  GDL  +   F +M   G++ +V  YNI+ID   K+GD   A+ ++ ++  E    P+
Sbjct: 34  VGRGDL--SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPD 90

Query: 206 VVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYR 265
           +VTYN +I+G  K G  DEC+ ++++MK  + + D  TY + I+  CK   +  A     
Sbjct: 91  IVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLH 150

Query: 266 EMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENG 324
           EM  +G+  + VTY+  ID FC+ G ++E  + +  M R     N  +Y  LI    + G
Sbjct: 151 EMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG 210

Query: 325 KVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAAS 384
            + EA+ + E + +     +  T+  L++GLC+                  EGR+ +A  
Sbjct: 211 NLAEALKLVEEILQAGIKLNVVTYTALLDGLCE------------------EGRMKEAEE 252

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
           +   M   G   N  T  +L++GFI+A ++E A  + KEM  K   P ++ Y T++ GLC
Sbjct: 253 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 312

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLL-----------------------INGLCQS 481
              R  EA   + E+ E G   + + Y+ L                       ++GLC++
Sbjct: 313 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKN 372

Query: 482 KKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTY 541
              ++A KL  + L KG  PD   Y  LI G    G +++AL L   M +     +L  Y
Sbjct: 373 NCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAY 432

Query: 542 NTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALC 601
             L+ GL  +G   KA  + + ++ + + PD + Y   +K   +  ++ +A E  N+   
Sbjct: 433 TALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 492

Query: 602 RGILPTTITWH 612
           RG++ T ++ H
Sbjct: 493 RGMI-TGLSDH 502



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 212/456 (46%), Gaps = 41/456 (8%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           V+P   + N +++ L K GR D   + +  M     ++  FTY   I  LCK G++E A 
Sbjct: 17  VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 76

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++ +M E+G   D VTYN++IDG  + G + EC  ++E M    C  +V++YN LI   
Sbjct: 77  SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 136

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG----- 375
            +  ++ +A      ++      +  T+   I+  CK G L +AI+   ++         
Sbjct: 137 CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 196

Query: 376 ------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKE 423
                        G LA+A  LV  + + G KLN  T  +L++G  +  +++ A  +F+ 
Sbjct: 197 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 256

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           M   G +P   +Y  L++G  K +    A   +KEM EK  KPD++ Y  ++ GLC   +
Sbjct: 257 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 316

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNI-----------------------LIHGLCSAGKVE 520
           ++ A  L  +  + G   +  +Y                         L+ GLC     E
Sbjct: 317 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFE 376

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            A +L+  M  +  +P+ + Y  L+DG  K G+  +AL + + ++E  +  D+ +Y   +
Sbjct: 377 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 436

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
            GL    ++  A   L++ + +G+LP  + +  L++
Sbjct: 437 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 196/395 (49%), Gaps = 30/395 (7%)

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRK 305
           + +H L K G  + + + +++M  +GI     TYN MID  C+ G ++    L+  M   
Sbjct: 26  ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 85

Query: 306 G-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           G   ++V+YN LI G  + G +DE I I+E +++ +C+ D  T+  LIN  CK   + KA
Sbjct: 86  GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 145

Query: 365 IQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
            + L+E++  G                 EG L +A      M +     N +T  SL++ 
Sbjct: 146 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 205

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD 467
             +A  L  A+ L +E+ + G    VV+Y  L++GLC+  R  EA    + ML  G  P+
Sbjct: 206 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 265

Query: 468 MITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
             TY+ L++G  ++K+++ A  +  +  +K   PD+ +Y  ++ GLC+  ++E+A  L  
Sbjct: 266 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 325

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
            +K+     N V Y TLMD  FK+G   +AL +   +L+             + GLC  +
Sbjct: 326 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNN 373

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
               A +  ++ L +G++P  I +  L+   M +G
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 19/370 (5%)

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNI 315
           +E A   + +M +  +F    + NA++    + G+     + ++ MG  G   +V +YNI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG 375
           +I  L + G ++ A S++  ++E     D  T+  LI+G  K G L++ I I  ++++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 376 EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVS 435
                             C  +  T N+L+N F +  ++  A     EM   G  P VV+
Sbjct: 122 ------------------CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 163

Query: 436 YNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL 495
           Y+T I+  CK     EA  F  +M      P+  TY+ LI+  C++  +  ALKL  + L
Sbjct: 164 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 223

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           Q G   +V  Y  L+ GLC  G++++A +++  M      PN  TY  L+ G  K  + +
Sbjct: 224 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 283

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            A +I   + E+ ++PD++ Y   L GLC+ SR+ +A   + +    GI    + +  L+
Sbjct: 284 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 343

Query: 616 RAVMNNGAST 625
            A   +G +T
Sbjct: 344 DAYFKSGQAT 353



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 208/440 (47%), Gaps = 43/440 (9%)

Query: 70  YCPEDVAL-SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKA 119
           + P+ V   S+I  +GK  + D+ + +F++M +   C+  ++         C+  +  KA
Sbjct: 87  FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA-DCDPDVITYNALINCFCKFERMPKA 145

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
             FL+ +   GLKP+V +Y T I+   K G L  A+  F +M    +  N   Y  LID 
Sbjct: 146 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 205

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K G+   A ++ E  +++  +  NVVTY  +++GLC+ GR  E  E++  M       
Sbjct: 206 NCKAGNLAEALKLVEE-ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           +  TY + +HG  KA  +E A+ + +EM E  I  D + Y  ++ G C   +++E   L 
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             +   G   N V Y  L+    ++G+  EA+++ E + +            L++GLCKN
Sbjct: 325 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKN 372

Query: 359 GYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAI 418
                A ++ +E+ +  +G + D                AYT  +L++G ++   L+ A+
Sbjct: 373 NCFEVAKKLFDEMLD--KGMMPDKI--------------AYT--ALIDGNMKHGNLQEAL 414

Query: 419 FLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGL 478
            L   M   G    + +Y  LI GL    +  +A + + EM+ KG  PD + Y  LI   
Sbjct: 415 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474

Query: 479 CQSKKIDMALKLCCQFLQKG 498
               K+D AL+L  +  ++G
Sbjct: 475 YALGKVDEALELQNEMAKRG 494



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 26/335 (7%)

Query: 17  NPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVA 76
           N  T  +L D+  +    A +  L   IL+  I   +V + + +  L E  +    E+V 
Sbjct: 195 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 254

Query: 77  LSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVY 136
            +++ A      P++         E +        + ++ E AK  L  + EK +KPD+ 
Sbjct: 255 RAMLNA---GVAPNQ---------ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 302

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
            YGT++ GL     L  A  +  E+ E G+ TN V Y  L+D +FK G    A  + E +
Sbjct: 303 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
           +              +++GLCK   F+   +++D M       D   Y + I G  K GN
Sbjct: 363 L-------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNI 315
           ++ A  +   M+E G+ +D   Y A+I G   +G++++   L + M  KG L + V Y  
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 316 LIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           LI+     GKVDEA+ +   + ++      + H V
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 238/495 (48%), Gaps = 27/495 (5%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           +   G+ PDV     V+  L  +       AV  EM + G+E ++V YN L+D F K+G 
Sbjct: 187 MASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGR 246

Query: 186 Y----MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
                M  KE+  R    +S  PN VTYNV+I GL + G  +E  E+ + M+ +++   S
Sbjct: 247 KDKIDMLLKEMEAR---GSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKK-ASS 302

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           FTY   I GL   G V+  + +  EM   GI    VTYNAMI G  ++G+I+     +  
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 302 MGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G L +V++YN L+ G  + G   EA+ ++  LR         T+ +LI+G C+ G 
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 361 LNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
           L +A ++  E+ E                   GC  + YT   LM G      L      
Sbjct: 423 LEEARRLKEEMVE------------------QGCLPDVYTYTILMKGSHNVCSLAMTREF 464

Query: 421 FKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           F EM  KG  P   +YNT I     +    +++   + ++ +G   D +TY++LI+GLC+
Sbjct: 465 FDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCK 524

Query: 481 SKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVT 540
           +  +  A +L  Q +  G  PD   Y  LIH  C  G + +A + +++M      P+ VT
Sbjct: 525 TGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVT 584

Query: 541 YNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDAL 600
           Y  ++    + G+   A   +  +LEE + P+ I+YN+ +  LC   R   A+    + L
Sbjct: 585 YTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEML 644

Query: 601 CRGILPTTITWHILV 615
            RG++P   T+ +L+
Sbjct: 645 ERGLVPNKYTYTLLI 659



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 201/418 (48%), Gaps = 21/418 (5%)

Query: 225 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 284
           CL  +  M  +    D       +  L  A   +    V+ EM++ GI    VTYN ++D
Sbjct: 180 CLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLD 239

Query: 285 GFCRAGKIKECFELWEVMGRKG--CL-NVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
            F + G+  +   L + M  +G  CL N V+YN++I GL   G ++EA  + E +R    
Sbjct: 240 SFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK- 298

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAAS 384
            A S T+  LI GL   G++ K   +  E+E  G                  G++  A +
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 385 LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLC 444
               M   G   +  T NSL+NG+ +A   + A+ LF ++ R G +PTV++YN LI+G C
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC 418

Query: 445 KVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVT 504
           ++    EA    +EM+E+G  PD+ TY++L+ G      + M  +   + L KG  PD  
Sbjct: 419 RLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCF 478

Query: 505 MYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
            YN  I    + G +  + QL   +       + VTYN L+DGL KTG+   A E+   +
Sbjct: 479 AYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQM 538

Query: 565 LEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +   L+PD I+Y   +   C    + +A +F ND +  G+ P+ +T+ +++ A    G
Sbjct: 539 ISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRG 596



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 174/350 (49%), Gaps = 20/350 (5%)

Query: 129 KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMR 188
           +G+ P V +Y  +I+GL++SG +  A A F EM   G+  +V+ YN L++G+ K G+   
Sbjct: 331 EGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKE 390

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
           A  ++  L     + P V+TYN++I+G C+ G  +E   + + M +     D +TY   +
Sbjct: 391 ALLLFGDL-RRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILM 449

Query: 249 HGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-C 307
            G     ++      + EM+  G+  D   YN  I      G I + F+L EV+  +G  
Sbjct: 450 KGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGIS 509

Query: 308 LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI 367
            + V+YNILI GL + G + +A  +   +       D  T+  LI+  C+ G+L +A + 
Sbjct: 510 SDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKF 569

Query: 368 LNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK 427
            N+                  M   G   +A T   +++ + +   L +A   F++M  +
Sbjct: 570 FND------------------MISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEE 611

Query: 428 GCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
           G  P  ++YN LI+ LC++ R   AY    EMLE+G  P+  TY+LLI+G
Sbjct: 612 GVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 20/334 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +  Q E A+     +   GL PDV +Y +++NG  K+G+   AL +F ++   G+   
Sbjct: 347 LLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPT 406

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YNILIDG+ + GD   A+ + E +V E    P+V TY +++ G           E +
Sbjct: 407 VLTYNILIDGYCRLGDLEEARRLKEEMV-EQGCLPDVYTYTILMKGSHNVCSLAMTREFF 465

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           D M       D F Y + I      G++  + ++   ++  GI  D VTYN +IDG C+ 
Sbjct: 466 DEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKT 525

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G +K+  EL   M   G   + ++Y  LI    E G + EA   +  +        + T+
Sbjct: 526 GNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTY 585

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            V+I+  C+                   G L  A     +M + G + N  T N L++  
Sbjct: 586 TVIIHAYCR------------------RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
            +  + + A   F EM  +G  P   +Y  LI+G
Sbjct: 628 CRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 264/584 (45%), Gaps = 68/584 (11%)

Query: 79  VIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEKG 130
           +++A  +   P++A+ +F+R+          +F       C+ +    A   L  + EKG
Sbjct: 245 LMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKG 304

Query: 131 LKP-DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
             P    +Y +VI   VK G++  A+ V DEM   G+  +V+    LI GF    +  +A
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKA 364

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            + + R+  E  + P+ V ++VMI   CK    ++ +E++ RMK       S      I 
Sbjct: 365 LDFFNRM-EEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQ 423

Query: 250 G----------------------------------LCKAGNVEGAERVYREMVESGIFVD 275
           G                                  LCK G V+ A    R M   GI  +
Sbjct: 424 GCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPN 483

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            V YN M+   CR   +     ++  M  KG   N  +Y+ILI G  +N     A   WE
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNA---WE 540

Query: 335 LLRE---KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
           ++ +    N  A+   +  +INGLCK G  +KA ++L  + +  E R +           
Sbjct: 541 VINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK--EKRYS----------- 587

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            GC     + NS+++GF +    ++A+  ++EMS  G SP VV++ +LING CK  R   
Sbjct: 588 MGCT----SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDL 643

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIH 511
           A   + EM  K  K D+  Y  LI+G C+   +  A  L  + L+ G  P+V++YN LI 
Sbjct: 644 ALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLIS 703

Query: 512 GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRP 571
           G  + GK++ A+ LY  M       +L TY T++DGL K G+   A ++++ +L   + P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVP 763

Query: 572 DIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           D I Y + + GL    +   A + L +   +   P  + +  ++
Sbjct: 764 DEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVI 807



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 241/517 (46%), Gaps = 30/517 (5%)

Query: 76  ALSVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLW 127
           A S+I  +   +   KALD F RM E        +F       C+  + EKA      + 
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMK 407

Query: 128 EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYM 187
             G+ P       +I G +K+     AL +F++ FE  +    +C  I +     K   +
Sbjct: 408 SVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFL--LLCKQGKV 465

Query: 188 RAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSF 247
            A   + R++    + PNVV YN M+   C+    D    ++  M +   + ++FTY   
Sbjct: 466 DAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSIL 525

Query: 248 IHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWE--VMGRK 305
           I G  K  + + A  V  +M+ S    + V YN +I+G C+ G+  +  E+ +  +  ++
Sbjct: 526 IDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585

Query: 306 GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
             +   SYN +I G  + G  D A+  +  + E   + +  T   LING CK+  ++ A+
Sbjct: 586 YSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLAL 645

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           ++++E                  M     KL+     +L++GF + + ++ A  LF E+ 
Sbjct: 646 EMIHE------------------MKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELL 687

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
             G  P V  YN LI+G   + +   A    K+M+  G   D+ TY+ +I+GL +   + 
Sbjct: 688 ELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLI 747

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
           +A  L  + L  G  PD  +Y +L++GL   G+   A ++   MKK++  PN++ Y+T++
Sbjct: 748 LASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVI 807

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKG 582
            G  + G+ ++A  + + +LE+ L  D   +N+ + G
Sbjct: 808 AGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 189/454 (41%), Gaps = 43/454 (9%)

Query: 196 LVMETSVYPNVVTYNVMINGLCKCG-RFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA 254
           LVM  S  P ++  + M+N L     RFD   E+  R         +F Y   ++   + 
Sbjct: 137 LVMFVSSNPTLIP-SAMVNNLVDSSKRFD--FELSSR---------AFNY--LLNAYIRN 182

Query: 255 GNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSY 313
             ++ A   +  MV+  +       N ++    R+  I E  E++  M   G   + V+ 
Sbjct: 183 RRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTT 242

Query: 314 NILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE 373
            +L+R  L   K +EA+ I+  +  +    D     + +   CK   L  A+ +L E+ E
Sbjct: 243 QLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMRE 302

Query: 374 GG------------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
            G                  EG + +A  + + M   G  ++     SL+ GF   ++L 
Sbjct: 303 KGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELG 362

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
            A+  F  M  +G +P  V ++ +I   CK     +A    K M   G  P  +    +I
Sbjct: 363 KALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMI 422

Query: 476 NGLCQSKKIDMALKLCCQ----FLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
            G  +++  + AL++       ++  GF     M N +   LC  GKV+ A      M+ 
Sbjct: 423 QGCLKAESPEAALEIFNDSFETWIAHGF-----MCNKIFLLLCKQGKVDAATSFLRMMEN 477

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +   PN+V YN +M    +  + D A  I++ +LE+ L+P+  +Y+I + G        +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQN 537

Query: 592 AFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           A+E +N  +        + ++ ++  +   G ++
Sbjct: 538 AWEVINQMIASNFEANEVIYNTIINGLCKVGQTS 571



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           L +K QF +A + L  + +K   P+V  Y TVI G  + G+L  A  V DEM E+G+  +
Sbjct: 775 LSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHD 834

Query: 170 VVCYNILIDGFFKK 183
              +N+L+ G  +K
Sbjct: 835 DTIFNLLVSGRVEK 848


>gi|356566730|ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Glycine max]
          Length = 650

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 244/503 (48%), Gaps = 25/503 (4%)

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A R    +  +G  P+V S+ T+ING      +  A  VFDEM E GVE N V Y++LI 
Sbjct: 138 AHRLFFDMRNRGHCPNVVSFTTLINGYCSVRAMRDARKVFDEMLESGVEPNSVTYSVLIG 197

Query: 179 GFFKKGDYMRAKEI----WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKK 234
           G  ++ D    +E+    WER+ +E         +  +++ LC+ G F E   + + +  
Sbjct: 198 GVLRERDLEGGRELMCRLWERMSVEVEDSVKTAAFANLVDSLCREGFFGEVFRIAEELPF 257

Query: 235 NEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKE 294
                +  +Y   +  LC+ G   GA R+   + + G     V+YN +I G  R G    
Sbjct: 258 GSCFSEEVSYGQMVDSLCRVGRYNGAARIVYLVRKRGFVPSDVSYNHVIHGLSRDGDCMR 317

Query: 295 CFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLIN 353
            ++L E     G  L+  +Y +L+  L     VD+A  + +L+  K     +  + + + 
Sbjct: 318 AYQLLEEGAEFGFMLSEHTYKVLVEALCHVMDVDKAREVLKLMLRKEGVDKTRIYNIYLR 377

Query: 354 GLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASK 413
            LC   ++N   ++LN               ++  M +  C+ +  T N+++NGF +  +
Sbjct: 378 ALC---FVNNPTELLN---------------VLVFMLESQCQADVITLNTVINGFCKMGR 419

Query: 414 LENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYS-FVKEMLEKGWKPDMITY 471
           ++ A  +  +M + K  +P VV++ T+I+G+    R  EA   F K M E G +P ++TY
Sbjct: 420 VDEASKVLHDMLAGKFAAPDVVTFTTVISGMLDAARVDEALDLFHKVMPENGLRPSVVTY 479

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L+ GL + K++  AL      + +G T D T Y +++ GLC + +VE+A   + N+  
Sbjct: 480 NALLRGLFKLKRVSDALMAFNNMVSEGITADSTTYTVVVEGLCESDQVEEAKSFWHNVIW 539

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
            + V +   Y  ++ GL  +G  ++A      +++  + P+I SYNI +   C+     +
Sbjct: 540 PSGVHDNFVYAAILKGLCHSGKLNEACHFLYELVDSGISPNIFSYNILINCACNLGLKIE 599

Query: 592 AFEFLNDALCRGILPTTITWHIL 614
           A++ + +    G+ P ++TW IL
Sbjct: 600 AYQIVREMKKNGLTPDSVTWRIL 622



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 248/515 (48%), Gaps = 35/515 (6%)

Query: 121 RFLNSLW--EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           R L SL   + G  P + +Y  +++    +     A  +F +M  RG   NVV +  LI+
Sbjct: 103 RLLRSLIASKPGFVPSLVNYNRLMDQFCGAHLPRDAHRLFFDMRNRGHCPNVVSFTTLIN 162

Query: 179 GFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK-----CGRFDECLEMWDRMK 233
           G+        A+++++ + +E+ V PN VTY+V+I G+ +      GR   C  +W+RM 
Sbjct: 163 GYCSVRAMRDARKVFDEM-LESGVEPNSVTYSVLIGGVLRERDLEGGRELMC-RLWERMS 220

Query: 234 -KNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
            + E    +  + + +  LC+ G      R+  E+     F + V+Y  M+D  CR G+ 
Sbjct: 221 VEVEDSVKTAAFANLVDSLCREGFFGEVFRIAEELPFGSCFSEEVSYGQMVDSLCRVGRY 280

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
                +  ++ ++G + + VSYN +I GL  +G    A  + E   E        T+ VL
Sbjct: 281 NGAARIVYLVRKRGFVPSDVSYNHVIHGLSRDGDCMRAYQLLEEGAEFGFMLSEHTYKVL 340

Query: 352 INGLCKNGYLNKAIQILNEV--EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           +  LC    ++KA ++L  +  +EG      D   + N   +  C +N  T   L+N   
Sbjct: 341 VEALCHVMDVDKAREVLKLMLRKEG-----VDKTRIYNIYLRALCFVNNPT--ELLN--- 390

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE-KGWKPDM 468
                   + +F  M    C   V++ NT+ING CK+ R  EA   + +ML  K   PD+
Sbjct: 391 --------VLVF--MLESQCQADVITLNTVINGFCKMGRVDEASKVLHDMLAGKFAAPDV 440

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFL-QKGFTPDVTMYNILIHGLCSAGKVEDALQLYS 527
           +T++ +I+G+  + ++D AL L  + + + G  P V  YN L+ GL    +V DAL  ++
Sbjct: 441 VTFTTVISGMLDAARVDEALDLFHKVMPENGLRPSVVTYNALLRGLFKLKRVSDALMAFN 500

Query: 528 NMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCS 587
           NM       +  TY  +++GL ++   ++A   W++++      D   Y   LKGLC   
Sbjct: 501 NMVSEGITADSTTYTVVVEGLCESDQVEEAKSFWHNVIWPSGVHDNFVYAAILKGLCHSG 560

Query: 588 RMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           ++++A  FL + +  GI P   +++IL+    N G
Sbjct: 561 KLNEACHFLYELVDSGISPNIFSYNILINCACNLG 595



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 227/475 (47%), Gaps = 25/475 (5%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER---GVE 167
           C  R    A++  + + E G++P+  +Y  +I G+++  DL G   +   ++ER    VE
Sbjct: 165 CSVRAMRDARKVFDEMLESGVEPNSVTYSVLIGGVLRERDLEGGRELMCRLWERMSVEVE 224

Query: 168 TNV--VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDEC 225
            +V    +  L+D   ++G +     I E L    S +   V+Y  M++ LC+ GR++  
Sbjct: 225 DSVKTAAFANLVDSLCREGFFGEVFRIAEELPF-GSCFSEEVSYGQMVDSLCRVGRYNGA 283

Query: 226 LEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDG 285
             +   ++K        +Y   IHGL + G+   A ++  E  E G  +   TY  +++ 
Sbjct: 284 ARIVYLVRKRGFVPSDVSYNHVIHGLSRDGDCMRAYQLLEEGAEFGFMLSEHTYKVLVEA 343

Query: 286 FCRAGKIKECFELWEVMGRK-GCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNAD 344
            C    + +  E+ ++M RK G      YNI +R L       E +++   + E  C AD
Sbjct: 344 LCHVMDVDKAREVLKLMLRKEGVDKTRIYNIYLRALCFVNNPTELLNVLVFMLESQCQAD 403

Query: 345 STTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSL 404
             T   +ING CK G +++A ++L+++     G+ A                +  T  ++
Sbjct: 404 VITLNTVINGFCKMGRVDEASKVLHDML---AGKFAAP--------------DVVTFTTV 446

Query: 405 MNGFIQASKLENAIFLF-KEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++G + A++++ A+ LF K M   G  P+VV+YN L+ GL K++R  +A      M+ +G
Sbjct: 447 ISGMLDAARVDEALDLFHKVMPENGLRPSVVTYNALLRGLFKLKRVSDALMAFNNMVSEG 506

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
              D  TY++++ GLC+S +++ A       +      D  +Y  ++ GLC +GK+ +A 
Sbjct: 507 ITADSTTYTVVVEGLCESDQVEEAKSFWHNVIWPSGVHDNFVYAAILKGLCHSGKLNEAC 566

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNI 578
                +      PN+ +YN L++     G   +A +I   + +  L PD +++ I
Sbjct: 567 HFLYELVDSGISPNIFSYNILINCACNLGLKIEAYQIVREMKKNGLTPDSVTWRI 621



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 185/376 (49%), Gaps = 24/376 (6%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           +G     LCR  ++  A R +  + ++G  P   SY  VI+GL + GD + A  + +E  
Sbjct: 267 YGQMVDSLCRVGRYNGAARIVYLVRKRGFVPSDVSYNHVIHGLSRDGDCMRAYQLLEEGA 326

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           E G   +   Y +L++      D  +A+E+ + ++ +  V    + YN+ +  LC     
Sbjct: 327 EFGFMLSEHTYKVLVEALCHVMDVDKAREVLKLMLRKEGVDKTRI-YNIYLRALCFVNNP 385

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFV--DAVTYN 280
            E L +   M +++ + D  T  + I+G CK G V+ A +V  +M+ +G F   D VT+ 
Sbjct: 386 TELLNVLVFMLESQCQADVITLNTVINGFCKMGRVDEASKVLHDML-AGKFAAPDVVTFT 444

Query: 281 AMIDGFCRAGKIKECFELW-EVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLRE 338
            +I G   A ++ E  +L+ +VM   G   +VV+YN L+RGL +  +V +A+  +  +  
Sbjct: 445 TVISGMLDAARVDEALDLFHKVMPENGLRPSVVTYNALLRGLFKLKRVSDALMAFNNMVS 504

Query: 339 KNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNA 398
           +   ADSTT+ V++ GLC++          ++VEE        A S  + +       + 
Sbjct: 505 EGITADSTTYTVVVEGLCES----------DQVEE--------AKSFWHNVIWPSGVHDN 546

Query: 399 YTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKE 458
           +   +++ G   + KL  A     E+   G SP + SYN LIN  C +    EAY  V+E
Sbjct: 547 FVYAAILKGLCHSGKLNEACHFLYELVDSGISPNIFSYNILINCACNLGLKIEAYQIVRE 606

Query: 459 MLEKGWKPDMITYSLL 474
           M + G  PD +T+ +L
Sbjct: 607 MKKNGLTPDSVTWRIL 622



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 185/409 (45%), Gaps = 26/409 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+  F +  R    L       +  SYG +++ L + G   GA  +   + +RG   +
Sbjct: 239 LCREGFFGEVFRIAEELPFGSCFSEEVSYGQMVDSLCRVGRYNGAARIVYLVRKRGFVPS 298

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
            V YN +I G  + GD MRA ++ E    E     +  TY V++  LC     D+  E+ 
Sbjct: 299 DVSYNHVIHGLSRDGDCMRAYQLLEEGA-EFGFMLSEHTYKVLVEALCHVMDVDKAREVL 357

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M + E    +  Y  ++  LC   N      V   M+ES    D +T N +I+GFC+ 
Sbjct: 358 KLMLRKEGVDKTRIYNIYLRALCFVNNPTELLNVLVFMLESQCQADVITLNTVINGFCKM 417

Query: 290 GKIKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIW-ELLREKNCNADST 346
           G++ E  ++   M  G+    +VV++  +I G+L+  +VDEA+ ++ +++ E        
Sbjct: 418 GRVDEASKVLHDMLAGKFAAPDVVTFTTVISGMLDAARVDEALDLFHKVMPENGLRPSVV 477

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  L+ GL K                    R++DA    N M   G   ++ T   ++ 
Sbjct: 478 TYNALLRGLFK------------------LKRVSDALMAFNNMVSEGITADSTTYTVVVE 519

Query: 407 GFIQASKLENA-IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           G  ++ ++E A  F    +   G     V Y  ++ GLC   +  EA  F+ E+++ G  
Sbjct: 520 GLCESDQVEEAKSFWHNVIWPSGVHDNFV-YAAILKGLCHSGKLNEACHFLYELVDSGIS 578

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL--IHG 512
           P++ +Y++LIN  C       A ++  +  + G TPD   + IL  +HG
Sbjct: 579 PNIFSYNILINCACNLGLKIEAYQIVREMKKNGLTPDSVTWRILDKLHG 627



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFL-- 495
           T+I+ LC   RF EA+      L     PD  T ++L+  L  S+      +L    +  
Sbjct: 52  TIIHSLCNSHRFSEAHHRFSLSLASASLPDERTCNVLLARLLASRTPRATWRLLRSLIAS 111

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + GF P +  YN L+   C A    DA +L+ +M+ R   PN+V++ TL++G        
Sbjct: 112 KPGFVPSLVNYNRLMDQFCGAHLPRDAHRLFFDMRNRGHCPNVVSFTTLINGYCSVRAMR 171

Query: 556 KALEIWNHILEERLRPDIISYNITLKGL 583
            A ++++ +LE  + P+ ++Y++ + G+
Sbjct: 172 DARKVFDEMLESGVEPNSVTYSVLIGGV 199


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/640 (25%), Positives = 289/640 (45%), Gaps = 76/640 (11%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           L++ +++P  A   F  +    G+ HS   +  +   L   ++    + +L+ + + K  
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQ-FEKAKRFLNSLWEK 129
           C  DV   V+ +     +P     VF  +  +   + G+L    Q F K KRF       
Sbjct: 175 C--DV-FDVLWSTRNVCVP--GFGVFDALFSVL-IDLGMLEEAIQCFSKMKRF------- 221

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
            + P   S   +++   K G        F +M   G    V  YNI+ID   K+GD   A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           + ++E +     V P+ VTYN MI+G  K GR D+ +  ++ MK    E D  TY + I+
Sbjct: 282 RGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL- 308
             CK G +      YREM  +G+  + V+Y+ ++D FC+ G +++  + +  M R G + 
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400

Query: 309 NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL 368
           N  +Y  LI    + G + +A  +   + +     +  T+  LI+GLC            
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD----------- 449

Query: 369 NEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKG 428
                    R+ +A  L  +MD  G   N  + N+L++GF++A  ++ A+ L  E+  +G
Sbjct: 450 -------AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502

Query: 429 CSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPD--------------------- 467
             P ++ Y T I GLC +E+   A   + EM E G K +                     
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562

Query: 468 --------------MITYSLLINGLCQ----SKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
                         ++T+ +LI+GLC+    SK +D   ++   F   G   +  ++  +
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTAM 619

Query: 510 IHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
           I GLC   +VE A  L+  M ++  VP+   Y +LMDG FK G+  +AL + + + E  +
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679

Query: 570 RPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           + D+++Y   + GL  C+++  A  FL + +  GI P  +
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 232/479 (48%), Gaps = 20/479 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           +C++   E A+     +  +GL PD  +Y ++I+G  K G L   +  F+EM +   E +
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V+ YN LI+ F K G      E + R +    + PNVV+Y+ +++  CK G   + ++ +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFY-REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M++     + +TY S I   CK GN+  A R+  EM++ G+  + VTY A+IDG C A
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450

Query: 290 GKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
            ++KE  EL+  M   G + N+ SYN LI G ++   +D A+ +   L+ +    D   +
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
           G  I GLC    +  A  ++NE++E G                  G   +   L++ M +
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFG 450
              ++   T   L++G  +   +  A+  F  +S   G       +  +I+GLCK  +  
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630

Query: 451 EAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            A +  ++M++KG  PD   Y+ L++G  +   +  AL L  +  + G   D+  Y  L+
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690

Query: 511 HGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERL 569
            GL    +++ A      M      P+ V   +++   ++ G  D+A+E+ +++++ +L
Sbjct: 691 WGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 221/492 (44%), Gaps = 21/492 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P    +  + + L+  G L  A+  F +M    V       N L+  F K G     K  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
           ++ ++      P V TYN+MI+ +CK G  +    +++ MK      D+ TY S I G  
Sbjct: 250 FKDMI-GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVV 311
           K G ++     + EM +     D +TYNA+I+ FC+ GK+    E +  M   G   NVV
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
           SY+ L+    + G + +AI  +  +R      +  T+  LI+  CK G            
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG------------ 416

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                  L+DA  L N M + G + N  T  +L++G   A +++ A  LF +M   G  P
Sbjct: 417 ------NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            + SYN LI+G  K +    A   + E+  +G KPD++ Y   I GLC  +KI+ A  + 
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +  + G   +  +Y  L+     +G   + L L   MK+ +    +VT+  L+DGL K 
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590

Query: 552 GDCDKALEIWNHILEE-RLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTIT 610
               KA++ +N I  +  L+ +   +   + GLC  +++  A       + +G++P    
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650

Query: 611 WHILVRAVMNNG 622
           +  L+      G
Sbjct: 651 YTSLMDGNFKQG 662



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 19/376 (5%)

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLN 309
           L   G +E A + + +M    +F    + N ++  F + GK  +    + +++G      
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
           V +YNI+I  + + G V+ A  ++E ++ +    D+ T+  +I+G               
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF-------------- 307

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
               G  GRL D       M    C+ +  T N+L+N F +  KL   +  ++EM   G 
Sbjct: 308 ----GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P VVSY+TL++  CK     +A  F  +M   G  P+  TY+ LI+  C+   +  A +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L  + LQ G   +V  Y  LI GLC A ++++A +L+  M     +PNL +YN L+ G  
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           K  + D+ALE+ N +    ++PD++ Y   + GLCS  ++  A   +N+    GI   ++
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 610 TWHILVRAVMNNGAST 625
            +  L+ A   +G  T
Sbjct: 544 IYTTLMDAYFKSGNPT 559



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 27/287 (9%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNE--------IFGCEAGILCRKRQFEKAKRFLNSLWEK 129
           ++I  + K    D+AL++   +          ++G     LC   + E AK  +N + E 
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G+K +   Y T+++   KSG+    L + DEM E  +E  VV + +LIDG  K     +A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
            + + R+  +  +  N   +  MI+GLCK  + +    ++++M +     D   Y S + 
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656

Query: 250 GLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG--- 306
           G  K GNV  A  +  +M E G+ +D + Y +++ G     ++++     E M  +G   
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716

Query: 307 ----CLNVVSYNILIRGLLENGKVDEAISIW------ELLREKNCNA 343
               C++V      ++   E G +DEA+ +       +LL   N NA
Sbjct: 717 DEVLCISV------LKKHYELGCIDEAVELQSYLMKHQLLTSDNDNA 757


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 214/416 (51%), Gaps = 32/416 (7%)

Query: 205 NVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVY 264
           N V+Y +++ G CK G F + LE+ D MK N    +   + + I GLC AG V  A   +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 265 REMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLEN 323
           R + E     +  TY+ ++D  C++G+  E + L   M +KGC  NVV+YN LI G  + 
Sbjct: 89  RRIGED-CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 324 GKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAA 383
            ++DE + + + + ++ C AD  T+ ++++  CKN  +++A ++LN +E           
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----------- 196

Query: 384 SLVNRMDKHGCKLNAYTCNSLMNGFIQA--SKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
                      K N  T NSL      A   +   A+ L ++M ++G  P  V+Y T++ 
Sbjct: 197 -----------KRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLL 245

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
            LCK  R  EAY  +  M  +G K D ++Y +L+     + +   +L+L  + L  G+  
Sbjct: 246 MLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYIL 305

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           D    N++IH  C AG + +A QL+ +M +R  +P+ VTYNTL+    K    D A+++ 
Sbjct: 306 DTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLL 365

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDA---FEFLNDALCRGILPTTITWHIL 614
           + +++   +P++I+YN  +K  C   R  +A   F+ + D+ C    P  +++  L
Sbjct: 366 HQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGC---FPDRVSYTTL 418



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 191/392 (48%), Gaps = 24/392 (6%)

Query: 137 SYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERL 196
           SYG ++ G  K+G+   AL + DEM   GV  NVV +  +I G    G   +A   + R+
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 197 VMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGN 256
             + +  PNV TY+++++ LCK G+  E   +   M K     +  TY + I G  K   
Sbjct: 92  GEDCA--PNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 257 VEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNVVSYNIL 316
           ++    + +EM + G   D +TY  ++D FC+   I E + L   + ++   NVV+YN L
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR---NVVTYNSL 206

Query: 317 IRGL--LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEG 374
              L   E  +  EA+S+ E + ++    +   +  ++  LCKN  L++A Q+L  +   
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 375 G-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
           G                  GR  D+  L+ RM   G  L+  T N +++ F +A  L  A
Sbjct: 267 GCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             LFK M ++G  P+ V+YNTLI   CK ++   A   + +M++  +KP++ITY+ +I  
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
            C+ ++ + A  +    +  G  PD   Y  L
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 164/345 (47%), Gaps = 28/345 (8%)

Query: 282 MIDGFCRAGKIKECFELWE--VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLREK 339
           M+  F  + + +  +E +   ++G    +N VSY IL++G  + G+  +A+ + + ++  
Sbjct: 1   MLQIFVDSKRHRHGYEFYRHRLLGSYA-VNEVSYGILMQGFCKAGEFQQALELLDEMKSN 59

Query: 340 NCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAY 399
               +   H  +I GLC  G +++A+     + E                    C  N Y
Sbjct: 60  GVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-------------------CAPNVY 100

Query: 400 TCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
           T + L++   ++ +   A  L  EM +KGCSP VV+YN LI+G  K+ER  E    +KEM
Sbjct: 101 TYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160

Query: 460 LEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSA--G 517
            ++G + D+ITY+++++  C++  ID A +L     ++    +V  YN L   L +A   
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGD 216

Query: 518 KVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYN 577
           +  +AL L   M +    PN V Y T++  L K    D+A ++   +  +  + D +SY 
Sbjct: 217 RTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYK 276

Query: 578 ITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           I +    S  R  D+ E L   L  G +  T T ++++      G
Sbjct: 277 ILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAG 321



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 163/349 (46%), Gaps = 34/349 (9%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFK----KGDYMR 188
           P+VY+Y  +++ L KSG    A  +  EM ++G   NVV YN LIDGF K        M 
Sbjct: 97  PNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLML 156

Query: 189 AKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFI 248
            KE+ +R         +V+TY ++++  CK    DE   + + ++K    ++  TY S  
Sbjct: 157 LKEMSQR-----GCRADVITYTMILDIFCKNNSIDEAYRLLNALEK----RNVVTYNSLF 207

Query: 249 HGLCKAGNVEGAE--RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG 306
             L  A      E   +  +M++ G   + V Y  ++   C+  ++ E +++   M  +G
Sbjct: 208 TALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQG 267

Query: 307 C-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAI 365
           C  + VSY IL+      G+  +++ +   +       D+ T  V+I+  CK G L++A 
Sbjct: 268 CKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAH 327

Query: 366 QILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
           Q                  L   M + G   +  T N+L+  F +A + + A+ L  +M 
Sbjct: 328 Q------------------LFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMI 369

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           +    P V++YN++I   C+ +R  EA    + M++ G  PD ++Y+ L
Sbjct: 370 QADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 33/359 (9%)

Query: 91  KALDVFQRMNE-------IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVIN 143
           +AL  F+R+ E        +      LC+  Q  +A   +  + +KG  P+V +Y  +I+
Sbjct: 83  QALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALID 142

Query: 144 GLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY 203
           G  K   L   L +  EM +RG   +V+ Y +++D F K      A  +   L       
Sbjct: 143 GFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR---- 198

Query: 204 PNVVTYNVMINGLCKC--GRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
            NVVTYN +   L      R  E L + ++M +     +   Y + +  LCK   ++ A 
Sbjct: 199 -NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAY 257

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVVSYNILIRGL 320
           +V   M   G   D V+Y  ++  F  AG+  +  EL   ++G    L+  + N++I   
Sbjct: 258 QVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKF 317

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
            + G + EA  +++ + ++     + T+  LI   CK    + A+++L++          
Sbjct: 318 CKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQ---------- 367

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                   M +   K N  T NS++  F +  + E A  +F+ M   GC P  VSY TL
Sbjct: 368 --------MIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 256/520 (49%), Gaps = 42/520 (8%)

Query: 74  DVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKP 133
           D    V+QA+ + ++P   +DV+  +  I G      C + + ++A+  L  + ++ L  
Sbjct: 286 DFGYQVLQAWKEGNIP---IDVYAYVAVIRG-----FCNEMKMDRAEVVLGDMEKQELIS 337

Query: 134 DVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIW 193
           D   Y  +I G  K+GDL  ALA+ ++M  +G++TN V  + ++  F +KG + +  E +
Sbjct: 338 DARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEF 397

Query: 194 ERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCK 253
           +R   +  ++ + V+YN++++ LCK  + D+ + + D MK  + + D   Y + I+G C 
Sbjct: 398 KRF-KDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCH 456

Query: 254 AGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVS 312
            G +  A RV+ EM   G+  D VT+N ++  F R G   E  +L+E M  +    N ++
Sbjct: 457 VGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAIT 516

Query: 313 YNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVE 372
           +N++I GL   GKV EA + +  + +K+ +     +G +I G C+  +  KA ++  E+ 
Sbjct: 517 HNVMIEGLCIGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKASELFFELS 572

Query: 373 EGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLE 415
           E G                 EG    A  L+  M     + +      ++    +A  + 
Sbjct: 573 ERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMR 632

Query: 416 NAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLI 475
           NA  +F  + + G +P + +Y T+IN  C+  R  EA +  ++M  +G KPD++T+++L+
Sbjct: 633 NAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLL 692

Query: 476 NGLC----------QSKKIDMALKLCCQFLQKG-FTPDVTMYNILIHGLCSAGKVEDALQ 524
           +G            + K++++A     + +Q     PDV  Y  LI G C   ++EDA+ 
Sbjct: 693 DGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIG 752

Query: 525 LYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHI 564
           LY  M  R   P+  T   L+ G    GD D  L   N I
Sbjct: 753 LYDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLNLI 792



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 244/515 (47%), Gaps = 28/515 (5%)

Query: 123 LNSLWE---KGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           +N+L++   +G  P ++++  ++N L+ +G +  ALA++ ++   G+  N   Y+I+I  
Sbjct: 184 INALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKA 243

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
           F +KG  + A  +++ + +   V PN   Y   I GLC   R D   ++    K+     
Sbjct: 244 FCRKGSLVEASNVFQEMEL-CGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPI 302

Query: 240 DSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW 299
           D + Y + I G C    ++ AE V  +M +  +  DA  Y+ +I G+C+AG + +   L 
Sbjct: 303 DVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALH 362

Query: 300 EVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKN 358
             M  KG   N V  + +++   E G   + +  ++  ++     D  ++ ++++ LCK 
Sbjct: 363 NDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKL 422

Query: 359 GYLNKAIQILNEVEEGGE------------------GRLADAASLVNRMDKHGCKLNAYT 400
             +++A+ +L+E+ +G +                  G+L DA  +   M+  G + +  T
Sbjct: 423 EKVDQAVALLDEM-KGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVT 481

Query: 401 CNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEML 460
            N L+  F +      A+ L++ M  +   P  +++N +I GLC   +  EA +F   M 
Sbjct: 482 FNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNME 541

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVE 520
           +K     +  Y  +I G C++K  + A +L  +  ++G   D      L+  LC  G+ +
Sbjct: 542 DKS----IDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKD 597

Query: 521 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
            AL L   M   N  P+   Y  ++   ++ GD   A  +++ + +  L PDI +Y   +
Sbjct: 598 RALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMI 657

Query: 581 KGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
              C  +R+S+A     D   RGI P  +T+ +L+
Sbjct: 658 NVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLL 692



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/440 (21%), Positives = 190/440 (43%), Gaps = 19/440 (4%)

Query: 204 PNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERV 263
           P++  Y  +I  LC  G       ++  + +N  +  SF     +  L    +++     
Sbjct: 93  PDIPAYAAIIRILCHWGLHKMLHSIFLHLHQNNNDFTSFDISHLLDTLSLPHHIDIDLEK 152

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
              +     F+  V Y+A++  +  AG + E       + R+G L ++ ++N L+  L+ 
Sbjct: 153 EDTVKHRSSFLIQV-YDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIA 211

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG------- 375
           NGKVD A++I++ L+    N +  T+ ++I   C+ G L +A  +  E+E  G       
Sbjct: 212 NGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYA 271

Query: 376 -----EGRLADAAS-----LVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMS 425
                EG  A+  S     ++    +    ++ Y   +++ GF    K++ A  +  +M 
Sbjct: 272 YTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDME 331

Query: 426 RKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           ++        Y+ LI G CK     +A +   +M  KG K + +  S ++   C+     
Sbjct: 332 KQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHS 391

Query: 486 MALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLM 545
             ++   +F       D   YNI++  LC   KV+ A+ L   MK +    +++ Y TL+
Sbjct: 392 QVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLI 451

Query: 546 DGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +G    G    A  ++  +  + L PD++++NI L         ++A +       + + 
Sbjct: 452 NGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLK 511

Query: 606 PTTITWHILVRAVMNNGAST 625
           P  IT ++++  +   G  T
Sbjct: 512 PNAITHNVMIEGLCIGGKVT 531



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 22/293 (7%)

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQIL--------NEVEEGGEGRLA 380
           A SI+  L+    N D   +  +I  LC  G L+K +  +        N+        L 
Sbjct: 83  AFSIFSHLK----NPDIPAYAAIIRILCHWG-LHKMLHSIFLHLHQNNNDFTSFDISHLL 137

Query: 381 DAASLVNRMD---------KHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
           D  SL + +D         KH         ++L+  ++ A  L+ AI    ++ R+G  P
Sbjct: 138 DTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLP 197

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
            + ++N L+N L    +   A +  K++   G  P+  TYS++I   C+   +  A  + 
Sbjct: 198 HIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVF 257

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            +    G  P+   Y   I GLC+  + +   Q+    K+ N   ++  Y  ++ G    
Sbjct: 258 QEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNE 317

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGI 604
              D+A  +   + ++ L  D   Y+  ++G C    +S A    ND   +GI
Sbjct: 318 MKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGI 370


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 238/473 (50%), Gaps = 34/473 (7%)

Query: 126 LWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGD 185
           L  K   P ++ +G ++  LVK+      +++  +M   G+ +N+V  +ILI+ + + G 
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 186 YMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYC 245
              +  ++   +++     + +T+  +I GLC  G   + L   D++     + +  +Y 
Sbjct: 63  NALSFSVFAN-ILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 246 SFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGR 304
           + I+GLCK G    A    R +    +  D V YN +IDG C+   + + F L+ E++ +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 305 KGCLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKA 364
           + C +VV+YN LI GL    ++ +AI +   +  ++ N    T  +LI+  CK       
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCK------- 234

Query: 365 IQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG--FIQASKLENAIF--- 419
                      EG++ +A ++   M K   K N  T NSLM+G   +   K   +IF   
Sbjct: 235 -----------EGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM 283

Query: 420 ---------LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
                    LF+EM  K   P +V YN+LI+GLCK  R   A  F+ EM  +G  PD+ T
Sbjct: 284 IKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFT 343

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMK 530
           Y+ L++ LC++  +D A++L  +   +G  P V  YNILI+GLC +G+++DA +++ ++ 
Sbjct: 344 YNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLL 403

Query: 531 KRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
            +    ++ TYN ++ G  K G  D+ L + + + +    PD  +  I ++ L
Sbjct: 404 VKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSL 456



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 220/456 (48%), Gaps = 6/456 (1%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           FG   G L +   +         +   GL  ++ +   +IN   + G    + +VF  + 
Sbjct: 15  FGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANIL 74

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRF 222
           ++G  ++ + +  LI G   KG+  +A    +++V +     N V+Y  +INGLCK G+ 
Sbjct: 75  KKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQ-GFKLNQVSYGTLINGLCKVGQT 133

Query: 223 DECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAM 282
              LE   R+     + D   Y + I GLCK   V  A  +Y EMV   I    VTYN +
Sbjct: 134 RAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTL 193

Query: 283 IDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNC 341
           I G C   ++K+   L   M  +     V +++ILI    + GK+ EA +++ ++ +++ 
Sbjct: 194 ICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDV 253

Query: 342 NADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTC 401
             +  T+  L++G      + KA  I N + +     + +A +L   M       +    
Sbjct: 254 KPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIK----MVDEAMNLFEEMHFKQIYPDMVIY 309

Query: 402 NSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLE 461
           NSL++G  ++ +   A+    EM  +G  P + +YN+L++ LCK     +A   + ++ +
Sbjct: 310 NSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKD 369

Query: 462 KGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVED 521
           +G +P + TY++LINGLC+S ++  A K+    L KG+  DV  YN +I G C  G  ++
Sbjct: 370 QGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDE 429

Query: 522 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
            L + S MK   C P+      ++  LF  G+ DKA
Sbjct: 430 TLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 147/293 (50%), Gaps = 14/293 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC   Q + A   L+ +  + + P VY++  +I+   K G +  A  VF  M +  V+ N
Sbjct: 197 LCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPN 256

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMET-------------SVYPNVVTYNVMINGL 216
           +V YN L+DG        +AK I+  ++                 +YP++V YN +I+GL
Sbjct: 257 IVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGL 316

Query: 217 CKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDA 276
           CK GR    L+    M    +  D FTY S +  LCK  +V+ A  +  ++ + GI    
Sbjct: 317 CKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSV 376

Query: 277 VTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWEL 335
            TYN +I+G C++G++K+  +++E +  KG   +V +YN +I+G  + G  DE +++   
Sbjct: 377 CTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSK 436

Query: 336 LREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           +++  C+ D+    ++I  L   G  +KA +    +  G   R A A+++  R
Sbjct: 437 MKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCHREAPASTIRKR 489



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 116/219 (52%)

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           ++   ++A+     + L ++M   G +  +V+ + LIN   ++ +   ++S    +L+KG
Sbjct: 18  ILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKG 77

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           +  D IT++ LI GLC   +I  AL    + + +GF  +   Y  LI+GLC  G+   AL
Sbjct: 78  YGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAAL 137

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           +    +  +   P++V YNT++DGL K    + A  ++  ++ +R+ P +++YN  + GL
Sbjct: 138 EFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGL 197

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           C  +++ DA   L+  +   I PT  T+ IL+ A    G
Sbjct: 198 CIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEG 236



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 118/234 (50%)

Query: 382 AASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
             SL  +M+ +G   N  T + L+N + Q  +   +  +F  + +KG     +++ TLI 
Sbjct: 31  VVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIK 90

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           GLC      +A  F  +++ +G+K + ++Y  LINGLC+  +   AL+   +   K   P
Sbjct: 91  GLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQP 150

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIW 561
           DV MYN +I GLC    V DA  LY  M  +   P++VTYNTL+ GL        A+ + 
Sbjct: 151 DVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLL 210

Query: 562 NHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           + ++ E + P + +++I +   C   +M +A       +   + P  +T++ L+
Sbjct: 211 HKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLM 264



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 424 MSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKK 483
           +  K  +P++  +  ++  L K   +    S  ++M   G   +++T S+LIN   Q  +
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 484 IDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNT 543
             ++  +    L+KG+  D   +  LI GLC  G++  AL  +  +  +    N V+Y T
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 544 LMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG 603
           L++GL K G    ALE    I  + ++PD++ YN  + GLC    ++DAF    + + + 
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 604 ILPTTITWHILV 615
           I P+ +T++ L+
Sbjct: 183 ICPSVVTYNTLI 194



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/129 (20%), Positives = 56/129 (43%)

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
            K  TP +  +  ++  L  A      + L+  M+      NLVT + L++   + G   
Sbjct: 5   HKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNA 64

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +  ++ +IL++    D I++   +KGLC    +  A  F +  + +G     +++  L+
Sbjct: 65  LSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124

Query: 616 RAVMNNGAS 624
             +   G +
Sbjct: 125 NGLCKVGQT 133


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 251/531 (47%), Gaps = 26/531 (4%)

Query: 117 EKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER----GVETNVVC 172
           E A RF    W    +P        I  LV    + G  A+  E   R    GV  +   
Sbjct: 104 ETAVRFY---WWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSL 160

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           Y IL+ G+ + G +    E ++ +VM +      V YN  I  L K   FD   + +D  
Sbjct: 161 YRILLSGYVRAGKFDSVIETFDEMVM-SGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMA 219

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                    FTY  +I  LC++  +E  + +  +M + G   D    N  I   C+  ++
Sbjct: 220 LAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRL 279

Query: 293 KECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
            +  ++ E M  KG   +VV+Y  ++ GL +N K  EAI +WE + +++   D  + G L
Sbjct: 280 PDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGAL 339

Query: 352 INGLCKNGYLNKAIQ---------------ILNEVEEG--GEGRLADAASLVNRMDKHGC 394
           I GLCKN  +++A +               I N +  G    G +  A  +++ M  +GC
Sbjct: 340 IFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGC 399

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
           + +  T N L+N +     +E A  L ++M   G +P   SYN L+ GLCK  +  +A++
Sbjct: 400 EPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA 459

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
           FV + +E G   D ++ ++LI+  C++KK+  AL+L  +   KG   D   Y  LI+GL 
Sbjct: 460 FVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLF 519

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
           S G    A +L+  M      PN+  YN ++  L K G   +A  I++H++++ + PD +
Sbjct: 520 SVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTV 579

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNGAST 625
           ++N  +  L   SR  +A     D   RG+ P T+T+  L+  +++ G ST
Sbjct: 580 TFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKST 630



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 265/567 (46%), Gaps = 32/567 (5%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +++   +  TA+  +  A   PG+ HS     +++  L        +S  L  ++ Q   
Sbjct: 96  VVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVA 155

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEA---------GILCRKRQFEKAKR 121
               +   ++  Y +    D  ++ F  M  + GC           G+L +   F+  ++
Sbjct: 156 LHRSLYRILLSGYVRAGKFDSVIETFDEM-VMSGCREFGVDYNRYIGVLVKNCCFDLVEK 214

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           + +    KG     ++Y   I+ L +S  +     +  +M + G   ++   NI I    
Sbjct: 215 YYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLC 274

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+     A ++ E++  + +  P+VVTY  +++GLC   +F E + +W+ M K + + D 
Sbjct: 275 KQNRLPDALQMVEKMRTKGTS-PDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDV 333

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
           F+  + I GLCK   V+ A  +   M+   I +    YNA+I GF RAG I + +++   
Sbjct: 334 FSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISF 393

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   GC  ++V+YNIL+      G +++A  +   +     N D  ++  L+ GLCK   
Sbjct: 394 MRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQ 453

Query: 361 LNKAIQILNE-VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIF 419
           L+KA   +++ +E GG     D  S                CN L++ F +  K+++A+ 
Sbjct: 454 LDKAFAFVSDHMEVGG---FCDTVS----------------CNILIDAFCKTKKVKSALE 494

Query: 420 LFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLC 479
           LFKEM  KG     V+Y TLINGL  V  +  A    ++ML     P++  Y+++++ LC
Sbjct: 495 LFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554

Query: 480 QSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLV 539
           +      A  +    +QK  +PD   +N LI+ L    +  +AL L+ +M+ R   P+ +
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTL 614

Query: 540 TYNTLMDGLFKTGDCDKALEIWNHILE 566
           T+  L+ GL   G    A E+W +++E
Sbjct: 615 TFKYLISGLLDEGKSTLAYEVWEYMME 641



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 229/525 (43%), Gaps = 53/525 (10%)

Query: 116 FEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF-----ERGVETN- 169
           F     FL  +  +G+      Y  +++G V++G     +  FDEM      E GV+ N 
Sbjct: 139 FALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNR 198

Query: 170 ---VVCYNILIDGFFKKGDYMRAK----------------------EIWERLVMETS--- 201
              V+  N   D   K  D   AK                      E+ + L+++     
Sbjct: 199 YIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLG 258

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
             P++   N+ I  LCK  R  + L+M ++M+      D  TY + + GLC       A 
Sbjct: 259 CSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAI 318

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGL 320
            ++ EMV+  +  D  +  A+I G C+  K+ E FEL   M      L+V  YN LI G 
Sbjct: 319 GLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGF 378

Query: 321 LENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLA 380
              G +D+A  I   +R   C  D  T+ +L+N  C  G + KA                
Sbjct: 379 WRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKA---------------- 422

Query: 381 DAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLI 440
               L+ +M+  G   + Y+ N L+ G  +  +L+ A     +    G     VS N LI
Sbjct: 423 --EKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILI 480

Query: 441 NGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFT 500
           +  CK ++   A    KEM  KG + D +TY  LINGL      ++A +L  Q L     
Sbjct: 481 DAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQID 540

Query: 501 PDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEI 560
           P+V +YNI++H LC  G  + A  ++S+M ++   P+ VT+NTL+  L K     +AL +
Sbjct: 541 PNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNL 600

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGIL 605
           +  +    + PD +++   + GL    + + A+E     +  GI+
Sbjct: 601 FKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGII 645



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 206/421 (48%), Gaps = 22/421 (5%)

Query: 101 EIFGCEAGI--LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVF 158
           +I+ C   I  LC++ +   A + +  +  KG  PDV +Y TV++GL  +     A+ ++
Sbjct: 262 DIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLW 321

Query: 159 DEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCK 218
           +EM +R ++ +V     LI G  K      A E+  R+ +   +  +V  YN +I+G  +
Sbjct: 322 EEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRM-LTLDIELSVCIYNALISGFWR 380

Query: 219 CGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVT 278
            G  D+  ++   M+ N  E D  TY   ++  C  G +E AE++ R+M  SG+  D  +
Sbjct: 381 AGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYS 440

Query: 279 YNAMIDGFCRAGKIKECFE-LWEVMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
           YN ++ G C+  ++ + F  + + M   G  + VS NILI    +  KV  A+ +++ + 
Sbjct: 441 YNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMG 500

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            K   AD+ T+G LINGL   GY N A ++    E+    ++    +L N M  H CK+ 
Sbjct: 501 YKGMQADAVTYGTLINGLFSVGYYNLAEELF---EQMLNAQIDPNVNLYNIMLHHLCKVG 557

Query: 398 AYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVK 457
            +               + A  +F  M +K  SP  V++NTLI  L K  R  EA +  K
Sbjct: 558 HF---------------KRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFK 602

Query: 458 EMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAG 517
           +M  +G +PD +T+  LI+GL    K  +A ++    ++ G   D  +   LI  L S  
Sbjct: 603 DMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKSKN 662

Query: 518 K 518
           K
Sbjct: 663 K 663


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 226/491 (46%), Gaps = 24/491 (4%)

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEI 192
           P +    T++  L + G L    ++   M  R + T    Y  LI+ +   GD   AK  
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLHT----YTTLINAYCHAGDLPAAKRH 96

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              L +   + P+   Y   + G C+ G F     ++  M +    +  FTY + + GLC
Sbjct: 97  LSSL-LRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
            AG V  A  V+  M   G   D+  Y+ M+ G C AG+  E   L  + MG+    NV 
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 312 SYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEV 371
            YN LI G    G ++ AI I++ ++ K C  +  T+  LI G CK+G + +A+      
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM------ 269

Query: 372 EEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSP 431
                        L +RM + G   N  T  +L+ G      LE+A  L   M   G +P
Sbjct: 270 ------------VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAP 317

Query: 432 TVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLC 491
              +   LI+ LCK  R  EA  F+  +++KG K + + Y+ +I+ LC+S K D A  L 
Sbjct: 318 NEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLM 377

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + + +GF PD  MY+ LI GLC   K+ +A+ L ++M +     N V +  L+D   + 
Sbjct: 378 QKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLRE 437

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITW 611
              D    I + +    ++PD+++Y + ++  C   RM DA   +   +  G+ P   T+
Sbjct: 438 FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497

Query: 612 HILVRAVMNNG 622
           + L++   N G
Sbjct: 498 NTLIKGYANLG 508



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 227/494 (45%), Gaps = 27/494 (5%)

Query: 88  MPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVK 147
           MP + L  +  +   + C AG L        AKR L+SL   GL PD ++Y + + G  +
Sbjct: 69  MPVRNLHTYTTLINAY-CHAGDL------PAAKRHLSSLLRAGLAPDSHAYTSFVLGYCR 121

Query: 148 SGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVV 207
           +G    A  +F  M +RG       Y  L+ G    G    A  ++  +  +    P+  
Sbjct: 122 TGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCA-PDSH 180

Query: 208 TYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREM 267
            Y++M++GLC  GR  E + +           +   Y + I G C  G++E A  +++ M
Sbjct: 181 VYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240

Query: 268 VESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKV 326
              G   +  TY  +I GFC++GK++    L+  M   G   NVV+Y  LI+G    G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300

Query: 327 DEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLV 386
           + A  +   +       +  T  VLI+ LCK+G + +A Q L               SLV
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL--------------GSLV 346

Query: 387 NRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKV 446
            +    G K+N     S+++   ++ K + A  L +++  +G  P    Y++LI+GLC+ 
Sbjct: 347 QK----GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 447 ERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMY 506
            +  EA S + +M+E G + + + +++LI+   +  + D    +  +    G  PDV  Y
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462

Query: 507 NILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILE 566
            + I   C  G++EDA  +   M      PNL TYNTL+ G    G   +A     ++++
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522

Query: 567 ERLRPDIISYNITL 580
              +P+  SY + L
Sbjct: 523 NGCKPNDESYTVLL 536



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 245/547 (44%), Gaps = 35/547 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC      +A      +W  G  PD + Y  +++GL  +G    A+A+  +   +G   N
Sbjct: 154 LCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPN 213

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  YN LIDG+   GD   A +I++ +       PNV TY  +I G CK G+ +  + ++
Sbjct: 214 VAVYNALIDGYCSTGDLELAIDIFKGM-QSKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
            RM +     +  TY + I G C  G++E A R+   M   G+  +  T   +ID  C+ 
Sbjct: 273 SRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKH 332

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G+I+E  +    + +KG  +N V Y  +I  L ++GK D A ++ + +  +    D+  +
Sbjct: 333 GRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDK 391
             LI+GLC+   L +AI +LN++ E G                 E R      + +RM  
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAA 452

Query: 392 HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGE 451
            G K +  T    +  + Q  ++E+A  +  +M   G  P + +YNTLI G   +    +
Sbjct: 453 AGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQ 512

Query: 452 AYSFVKEMLEKGWKPDMITYSLLINGLCQS--------------KKIDMAL--KLCCQFL 495
           A+S +K M++ G KP+  +Y++L+  L +               K +DM +  +L  + +
Sbjct: 513 AFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVI 572

Query: 496 QKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           +   +    +Y+  I  L    ++E+A      M+  N  P+   Y  +++  ++     
Sbjct: 573 KLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLK 632

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +AL   + +++    P + SY   +  LC       A     D L +      I W IL+
Sbjct: 633 EALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILI 692

Query: 616 RAVMNNG 622
             ++  G
Sbjct: 693 DGLLQKG 699



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 23/417 (5%)

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
           ++  P +   N ++  L + G   +   +  RM      ++  TY + I+  C AG++  
Sbjct: 37  SAPVPPIRCLNTLLMALARHGMLSDMESLAARMPV----RNLHTYTTLINAYCHAGDLPA 92

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCLNV-VSYNILIR 318
           A+R    ++ +G+  D+  Y + + G+CR G       L+ +M ++GC     +Y  L++
Sbjct: 93  AKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQ 152

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           GL   G V EA++++  +    C  DS  + ++++GLC                  G GR
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLC------------------GAGR 194

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
             +A +L+      G   N    N+L++G+     LE AI +FK M  KGC P V +Y  
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI G CK  +   A      M+E G  P+++TY+ LI G C    ++ A +L       G
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG 314

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
             P+     +LI  LC  G++E+A Q   ++ ++    N V Y +++D L K+G  D A 
Sbjct: 315 LAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAH 374

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
            +   I+ E   PD   Y+  + GLC  +++ +A   LND +  G+    + + IL+
Sbjct: 375 NLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 149/628 (23%), Positives = 248/628 (39%), Gaps = 78/628 (12%)

Query: 27  SATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCYCPEDVALSVIQAYGKN 86
           S+    G A   H +   +       L  H  R+  L+  + C        +++Q     
Sbjct: 98  SSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGA 157

Query: 87  SMPDKALDVFQRM--------NEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 138
            M  +A+ VF  M        + ++      LC   +  +A   L     KG  P+V  Y
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
             +I+G   +GDL  A+ +F  M  +G   NV  Y  LI GF K G   RA  ++ R++ 
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI- 276

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           E  + PNVVTY  +I G C  G  +    +   M+      + +T    I  LCK G +E
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILI 317
            A++    +V+ GI V+ V Y +MID  C++GK      L + +  +G + +   Y+ LI
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGG-- 375
            GL    K+ EAIS+   + E    A++    +LI+   +    +    I + +   G  
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVK 456

Query: 376 ---------------EGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFL 420
                          +GR+ DA S++ +M  HG + N  T N+L+ G+     +  A   
Sbjct: 457 PDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSS 516

Query: 421 FKEMSRKGCSPTVVSYNTL----------------------------------------- 439
            K M   GC P   SY  L                                         
Sbjct: 517 LKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQC 576

Query: 440 ----------INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
                     I  L KV+R  EA SF+  M      P    Y+ +I    + K +  AL+
Sbjct: 577 SSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALR 636

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
                +++ + P +  Y  +I  LC  G    A  ++ ++  +    + + +  L+DGL 
Sbjct: 637 FLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLL 696

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYN 577
           + G+      + + + E+  RP    Y+
Sbjct: 697 QKGNTADCSRLLSFMEEQNCRPGSAIYS 724


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 259/542 (47%), Gaps = 20/542 (3%)

Query: 96  FQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGAL 155
           F+ +   F      LC     + AK FL  + + GL PD Y+Y T+I+GL K G L  A+
Sbjct: 234 FKPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAV 293

Query: 156 AVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMING 215
            +F+ + E G++   V YN LI+G+   G      +I + +  +  + P++VTY ++I G
Sbjct: 294 DLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQ-GIEPDIVTYTILIAG 352

Query: 216 LCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVD 275
            C+ G  +E +++ + +     + +  TY   ++ L K G V  AE +  E+   G+ +D
Sbjct: 353 HCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMD 412

Query: 276 AVTYNAMIDGFCRAGKIKECFELWEVM--GRKGCLNVVSYNILIRGLLENGKVDEAISIW 333
            + Y+ +I G+C+ G+I+   E+ +VM   +K     +++  ++ GL + G + EA    
Sbjct: 413 IIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYL 472

Query: 334 ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGE----------------- 376
           E +  K    D   + V+I+G  K G ++ A+ + +++   G                  
Sbjct: 473 ENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKC 532

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G L  A S    +          T  +LM+   +A K+   + +  EM  KG  P  ++Y
Sbjct: 533 GDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITY 592

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           + +I GLCK  RF +A  F+  M  +G   D +TY+ LI G C+ + I MA  +  + + 
Sbjct: 593 SVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVY 652

Query: 497 KGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDK 556
            G  P    YN LI+ LC  G+V  A  L  ++++R        Y TL+      G   +
Sbjct: 653 CGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYE 712

Query: 557 ALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVR 616
           A+ ++  +L++     +  ++  +  LC      +A  F+   L  G+ P T  +++LVR
Sbjct: 713 AISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVR 772

Query: 617 AV 618
           A+
Sbjct: 773 AL 774



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 267/566 (47%), Gaps = 28/566 (4%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEI-----FGCEAGILCRKRQFEKAKRFLNSLWEKGLK 132
           ++  +Y +  M   AL V  +MN +           +L   R  + A      +   G+ 
Sbjct: 140 ALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELFEEMEAYGIS 199

Query: 133 PDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV--CYNILIDGFFKKGDYMRAK 190
              YS+  +I+GL K   +  AL+   E   +G     +   +N+L+      G +++  
Sbjct: 200 KSEYSHSIIIDGLCKQDKVGEALSFLQEA-RKGERFKPLGMSFNVLMSALCNWG-FIQPA 257

Query: 191 EIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHG 250
           + +  L+++  + P+  TY+ +I+GLCK G  DE +++++R+ +   + ++ TY S I+G
Sbjct: 258 KSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLING 317

Query: 251 LCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLN 309
               G      ++ + M   GI  D VTY  +I G C +G ++E  ++  +++ +   LN
Sbjct: 318 YRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLN 377

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQI-- 367
           +V+Y++L+  L + G V EA ++   +     + D   + +LI+G CK G + +A+++  
Sbjct: 378 IVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCD 437

Query: 368 ------------LNE----VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
                       LN     V    +G L +A   +  +       +    N +++G+ + 
Sbjct: 438 VMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKI 497

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             + NA+ L+ ++   G  PT+V+ N+++ G CK      A S+ + +      P M+TY
Sbjct: 498 GDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTY 557

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + L++ L ++ K++  L +  + ++KG  P+   Y+++I GLC   +  DA+    NM  
Sbjct: 558 TTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHG 617

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
                + VTYNTL+ G  +  D   A  I + ++   + P  ++YN  +  LC   ++  
Sbjct: 618 EGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQ 677

Query: 592 AFEFLNDALCRGILPTTITWHILVRA 617
           A   L     RGI      +  L++A
Sbjct: 678 AEYLLESLRERGIELRKFAYTTLIKA 703



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 201/441 (45%), Gaps = 19/441 (4%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           C     E+  +  N + ++GL+ ++ +Y  ++N L K G +  A  +  E+   G++ ++
Sbjct: 354 CESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDI 413

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y+ILI G+ K G+  RA E+ + +     V P  + +  ++ GLCK G   E     +
Sbjct: 414 IAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLE 473

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            +    +  D   Y   I G  K G++  A  +Y ++V +G+F   VT N+++ G+C+ G
Sbjct: 474 NVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCG 533

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
            ++     +  +     L  +V+Y  L+  L E GKV+  +SI   + EK    ++ T+ 
Sbjct: 534 DLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYS 593

Query: 350 VLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFI 409
           V+I GLCK                  E R  DA   ++ M   G   +  T N+L+ GF 
Sbjct: 594 VVIKGLCK------------------ELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFC 635

Query: 410 QASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMI 469
           +   ++ A  +   M   G  PT V+YN LIN LC   +  +A   ++ + E+G +    
Sbjct: 636 EVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKF 695

Query: 470 TYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM 529
            Y+ LI   C       A+ L  + L  GF   V  ++  I+ LC     ++A+     M
Sbjct: 696 AYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFM 755

Query: 530 KKRNCVPNLVTYNTLMDGLFK 550
                 P+   Y  L+  L K
Sbjct: 756 LSAGVFPDTQVYYVLVRALQK 776



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)

Query: 490 LCCQFLQKGF---TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 546
           + C  L+ GF    P   M++ L +    A  + DAL + S M   N   ++ TY++L+ 
Sbjct: 119 ILCDILRNGFRECDPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLY 178

Query: 547 GLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRG--I 604
           GL  T   D ALE++  +    +     S++I + GLC   ++ +A  FL +A  +G   
Sbjct: 179 GLRMT---DMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEAR-KGERF 234

Query: 605 LPTTITWHILVRAVMNNG 622
            P  +++++L+ A+ N G
Sbjct: 235 KPLGMSFNVLMSALCNWG 252


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 231/472 (48%), Gaps = 24/472 (5%)

Query: 84  GKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAK---RFLNSLWEKG-LKPDVYSYG 139
             N M   AL VF  + E      G  C  ++  K +   RF   + E G +   V S  
Sbjct: 127 ADNRMFRDALKVFDYVMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLT 186

Query: 140 TVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVME 199
            V++ L + G++  A  + +EM  RGV   V  YN L++    + D     EI   L+  
Sbjct: 187 IVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILG-LMER 245

Query: 200 TSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEG 259
             V  ++VTY ++I       R  E  ++++ M +   E D + Y S I   C+AGNV  
Sbjct: 246 EGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRR 305

Query: 260 AERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIR 318
           A  ++ EM+  GI  +  T+ A+I G C+AG+++    L E M  KG  LNVV +N ++ 
Sbjct: 306 ASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMD 365

Query: 319 GLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGR 378
           G  + G +DEA  + +++  K   AD  T+ +L +GLCK          L+  EE     
Sbjct: 366 GYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCK----------LHRYEE----- 410

Query: 379 LADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNT 438
              A  ++N M + G   N  TC + +  + Q   L       + + ++G  P +V+YNT
Sbjct: 411 ---AKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNT 467

Query: 439 LINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKG 498
           LI+   K E+  +A+    EM+EKG  PD+ TY+ LI+G C   K+D ALKL  + L KG
Sbjct: 468 LIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKG 527

Query: 499 FTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFK 550
              +V  Y  +I GL   G+ ++AL+LY  M +   +P+   +  L+  L K
Sbjct: 528 IRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 200/408 (49%), Gaps = 22/408 (5%)

Query: 218 KCGRFDECLEMWDRMKKNEREKDSFTYCSFI-HGLCKAGNVEGAERVYREMVESGIFVDA 276
           KC + + C+  + RM ++ R        + +   LC+ G V  A+ +  EM   G+    
Sbjct: 158 KCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTV 217

Query: 277 VTYNAMIDGFCRAGKIKECF-ELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWE 334
            TYN +++  C   K +E   E+  +M R+G + ++V+Y ILI     + ++ EA  ++E
Sbjct: 218 FTYNTLLNA-CVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYE 276

Query: 335 LLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGC 394
            + E+N   D   +  +I+  C+ G + +A                  ++L + M   G 
Sbjct: 277 EMCERNVEMDVYVYTSMISWNCRAGNVRRA------------------SALFDEMICRGI 318

Query: 395 KLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYS 454
             N  T  +L++G  +A ++E A  L +EM  KG    VV +NT+++G CK     EA+ 
Sbjct: 319 VPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFR 378

Query: 455 FVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLC 514
               M  KG++ D+ TY++L +GLC+  + + A ++    ++KG  P+V      I   C
Sbjct: 379 LQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYC 438

Query: 515 SAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDII 574
             G + +  +   N++KR  VPN+VTYNTL+D   K     +A  +   ++E+ L PD+ 
Sbjct: 439 QEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVF 498

Query: 575 SYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
           +Y   + G C   ++ +A +  N+ L +GI     T+  ++  +   G
Sbjct: 499 TYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 216/467 (46%), Gaps = 32/467 (6%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDG---FFKKGDYMR-AKEIWERLVMETSVYPNVVTY 209
           AL VFD + E+G         ++++G   F KK + +      + R+V    V   V + 
Sbjct: 135 ALKVFDYVMEKG---------LVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSL 185

Query: 210 NVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVE 269
            ++++ LC+ G      E+ + M         FTY + ++      + EG + +   M  
Sbjct: 186 TIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMER 245

Query: 270 SGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDE 328
            G+    VTY  +I+ +  + +I E  +++E M  +   ++V  Y  +I      G V  
Sbjct: 246 EGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRR 305

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNR 388
           A ++++ +  +    ++ T G LI+G+CK G +  A  +L E                  
Sbjct: 306 ASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEE------------------ 347

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           M   G  LN    N++M+G+ +   ++ A  L   M RKG    V +YN L +GLCK+ R
Sbjct: 348 MQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHR 407

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
           + EA   +  M+EKG  P+++T +  I   CQ   +    +      ++G  P++  YN 
Sbjct: 408 YEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNT 467

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           LI       KV+ A  L + M ++  +P++ TY +L+ G       D+AL+++N +L + 
Sbjct: 468 LIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKG 527

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +R ++ +Y   + GL    R  +A +  ++ +  G++P    +  LV
Sbjct: 528 IRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV 574



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 21/193 (10%)

Query: 5   AKRLLNLLKAE---KNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRIL 61
           AKR+LN++  +    N  T     +   +E   A       +I +R + P +V + + I 
Sbjct: 411 AKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLID 470

Query: 62  ELIEIQKCYCPEDVALSVIQAYG-KNSMPDKAL--DVFQRMNEIFGCEAGILCRKRQFEK 118
              + +K          V QA+  K  M +K L  DVF   + I G      C   + ++
Sbjct: 471 AYSKNEK----------VKQAHXLKAEMVEKGLLPDVFTYTSLIHG-----ECIVDKVDE 515

Query: 119 AKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILID 178
           A +  N +  KG++ +V +Y  +I+GL K G    AL ++DEM   G+  +   +  L+ 
Sbjct: 516 ALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVG 575

Query: 179 GFFKKGDYMRAKE 191
              K   +   K+
Sbjct: 576 SLHKPSSHAALKQ 588


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 33/521 (6%)

Query: 115 QFEKAKRFLNSLW---EKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVV 171
           +F +   F ++LW   E    PD  +   ++NGLV+          +  M  RG+  +V 
Sbjct: 175 EFLEMGLFEDALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 234

Query: 172 CYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDR 231
            Y++L    FK+G   + +++ + +     V PNV  Y + I  LC+  + +E  +M++ 
Sbjct: 235 IYSVLFQCCFKQGFPSKKEKLLDEMT-SLGVKPNVYIYTIYIRDLCRENKMEEAEKMFEL 293

Query: 232 MKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGK 291
           MK +    + +TY + I G CK GN+  A  +Y+E++ + +  + V +  ++DGFC+A +
Sbjct: 294 MKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 353

Query: 292 IKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGV 350
           +     L+  M + G   N+  YN LI G  ++G + EA+ +   +   N + D  T+ +
Sbjct: 354 LVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTI 413

Query: 351 LINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQ 410
           LINGLC                   E RLA+A  L  RM       ++ T NSL++GF +
Sbjct: 414 LINGLCT------------------EERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCK 455

Query: 411 ASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMIT 470
              +E A+ L  EM+  G  P +++++TLI+G CKV     A     EM  KG  PD++T
Sbjct: 456 EYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVT 515

Query: 471 YSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLY---- 526
           Y+ LI+   +   +  AL+L    L+ G  P+   +  L+ G    G++ DA+  Y    
Sbjct: 516 YTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENN 575

Query: 527 -----SNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 581
                 ++ +R+C    V +  L++GL + G   +A   ++ +    + PDI SY   LK
Sbjct: 576 QAATGKSIVQRSCW-KYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLK 634

Query: 582 GLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
                 R++D      D +  GILP  +   +L      NG
Sbjct: 635 AHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENG 675



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 193/424 (45%), Gaps = 23/424 (5%)

Query: 173 YNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRM 232
           +++LI  F + G +  A  +W    M  S  P+      ++NGL +  RFD     +  M
Sbjct: 169 FSLLIMEFLEMGLFEDA--LWVSREMRCS--PDSKACLAILNGLVRRRRFDSVWVDYQLM 224

Query: 233 KKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKI 292
                  D   Y        K G     E++  EM   G+  +   Y   I   CR  K+
Sbjct: 225 ISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284

Query: 293 KECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVL 351
           +E  +++E+M   G + N+ +Y+ +I G  + G + +A  +++ +       +    G L
Sbjct: 285 EEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 352 INGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQA 411
           ++G CK                     L  A SL   M K G   N Y  N L++G  ++
Sbjct: 345 VDGFCK------------------ARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKS 386

Query: 412 SKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITY 471
             +  A+ L  EM     SP V +Y  LINGLC  ER  EA    + M  +   P  +TY
Sbjct: 387 GNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTY 446

Query: 472 SLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKK 531
           + LI+G C+   I+ AL LC +    G  P++  ++ LI G C    ++ A+ LY  M  
Sbjct: 447 NSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTI 506

Query: 532 RNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSD 591
           +  VP++VTY TL+D  FK  +  +AL +++ +LE  + P+  ++   + G     R+SD
Sbjct: 507 KGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSD 566

Query: 592 AFEF 595
           A +F
Sbjct: 567 AIDF 570



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 28/409 (6%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LCR+ + E+A++    +   G+ P++Y+Y  +I+G  K+G+L  A  ++ E+    +  N
Sbjct: 278 LCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPN 337

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           VV +  L+DGF K  + + A+ ++  +V +  V PN+  YN +I+G CK G   E + + 
Sbjct: 338 VVVFGTLVDGFCKARELVAARSLFVHMV-KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLL 396

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M+      D FTY   I+GLC    +  A R+++ M    IF  +VTYN++I GFC+ 
Sbjct: 397 SEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKE 456

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
             I++  +L   M   G   N+++++ LI G  +   +  A+ ++  +  K    D  T+
Sbjct: 457 YNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTY 516

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+   K   + +A+++ +++ E                   G   N +T   L++GF
Sbjct: 517 TTLIDAHFKEANMKEALRLYSDMLEA------------------GIHPNDHTFACLVDGF 558

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVS--------YNTLINGLCKVERFGEAYSFVKEML 460
            +  +L +AI  + E ++     ++V         +  LI GLC+      A  F  +M 
Sbjct: 559 WKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMK 618

Query: 461 EKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNIL 509
             G  PD+ +Y  ++    + K+I   + L C  ++ G  P++ +  +L
Sbjct: 619 SGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLL 667



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 150/301 (49%), Gaps = 14/301 (4%)

Query: 102 IFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEM 161
           +FG      C+ R+   A+     + + G+ P++Y Y  +I+G  KSG++L A+ +  EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 162 FERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGR 221
               +  +V  Y ILI+G   +     A  +++R+  E  ++P+ VTYN +I+G CK   
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE-RIFPSSVTYNSLIHGFCKEYN 458

Query: 222 FDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNA 281
            ++ L++   M  +  E +  T+ + I G CK  N++ A  +Y EM   GI  D VTY  
Sbjct: 459 IEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 282 MIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIW------- 333
           +ID   +   +KE   L+  M   G   N  ++  L+ G  + G++ +AI  +       
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAA 578

Query: 334 --ELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDK 391
             + + +++C         LI GLC+NGY+ +A +  ++++ GG     D  S V+ +  
Sbjct: 579 TGKSIVQRSC-WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVT--PDIWSYVSMLKA 635

Query: 392 H 392
           H
Sbjct: 636 H 636



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 103 FGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMF 162
           F C    LC+     +A RF + +   G+ PD++SY +++   ++   +   + +  +M 
Sbjct: 594 FTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMI 653

Query: 163 ERGVETNVVCYNILIDGFFKKGDYMRA 189
           + G+  N++  N L+  F+++  Y+R+
Sbjct: 654 KTGILPNLMV-NQLLAMFYQENGYLRS 679


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 200/388 (51%), Gaps = 20/388 (5%)

Query: 139 GTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVM 198
           G +++ ++ S   +     + E+ E G    V  YNILI+ F K+G    AK I+   + 
Sbjct: 192 GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE-IR 250

Query: 199 ETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVE 258
           +  + P  V++N +INGLCK    DE   +   M++N    D FTY   IHGLCK G ++
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310

Query: 259 GAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILI 317
            AE+++ EM + G+  + +T+ A+IDG CR+ +I      +  M   G   ++V YN L+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLL 370

Query: 318 RGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEG 377
            GL + G V++A  + + +R      D  T+  LI+G CK G L  A+    E+ +G   
Sbjct: 371 NGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM----EIRKG--- 423

Query: 378 RLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYN 437
                      M++ G  L+     +L++GF +  ++ +A    +EM   G  P   +Y 
Sbjct: 424 -----------MNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472

Query: 438 TLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQK 497
            +I+G CK       +  +KEM   G KP +ITY++L+NGLC+  ++  A  L    L  
Sbjct: 473 MVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532

Query: 498 GFTPDVTMYNILIHGLCSAGKVEDALQL 525
           G TPD   YNIL+ G C  GK ED L+L
Sbjct: 533 GVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 197/393 (50%), Gaps = 29/393 (7%)

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           F + + E G  P V  Y  +IN   K G +  A  +F+E+ +RG+    V +N LI+G  
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 182 KKGDY---MRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNERE 238
           K  +     R K+  E    E  +YP+V TY+V+I+GLCK GR D   +++D M++    
Sbjct: 270 KSRNLDEGFRLKKTME----ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325

Query: 239 KDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFEL 298
            +  T+ + I G C++  ++ A   Y +M+  G+  D V YN +++G C+ G + +  +L
Sbjct: 326 PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385

Query: 299 WEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCK 357
            + M   G   + ++Y  LI G  + G ++ A+ I + + E+    D+     LI+G C+
Sbjct: 386 VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445

Query: 358 NGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENA 417
                             +GR+ DA   +  M + G K +  T   +++G+ +   ++  
Sbjct: 446 ------------------DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMG 487

Query: 418 IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLING 477
             L KEM   G  P V++YN L+NGLCK  +   A   ++ ML  G  PD ITY++L+ G
Sbjct: 488 FKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547

Query: 478 LCQSKKIDMALKLCCQFLQKGFTPDVTMYNILI 510
            C++ K +  LKL     +KG   D   Y  L+
Sbjct: 548 HCKNGKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 183/362 (50%), Gaps = 19/362 (5%)

Query: 264 YREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLE 322
           Y E++E G       YN +I+ FC+ G I++   ++  + ++G     VS+N LI GL +
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 323 NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADA 382
           +  +DE   + + + E     D  T+ VLI+GLCK                  EGRL  A
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK------------------EGRLDVA 312

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L + M + G + N  T  +L++G  ++ ++++A+  + +M   G  P +V YNTL+NG
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPD 502
           LCKV    +A   V EM   G KPD ITY+ LI+G C+   ++ A+++     ++G   D
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 503 VTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWN 562
              +  LI G C  G+V DA +    M +    P+  TY  ++DG  K G+     ++  
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 563 HILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMNNG 622
            +     +P +I+YN+ + GLC   +M +A   L   L  G+ P  IT++IL+     NG
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552

Query: 623 AS 624
            +
Sbjct: 553 KA 554



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 288 RAGKIKECFELWEVMGRKG--CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           R GK         ++   G  C N V ++ L+    ++G V +AI  + L+R  N     
Sbjct: 130 RKGKDSAASVFAAILDTAGTRCSNFV-FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPF 188

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGG-----------------EGRLADAASLVNR 388
              G L++ +  +          +E+ E G                 EG + DA  + N 
Sbjct: 189 HGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE 248

Query: 389 MDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVER 448
           + K G +    + N+L+NG  ++  L+    L K M      P V +Y+ LI+GLCK  R
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 449 FGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNI 508
              A     EM ++G +P+ IT++ LI+G C+S++ID A+    Q L  G  PD+ MYN 
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 509 LIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEER 568
           L++GLC  G V  A +L   M+     P+ +TY TL+DG  K GD + A+EI   + EE 
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428

Query: 569 LRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +  D +++   + G C   R+ DA   L + +  G+ P   T+ +++
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 128/244 (52%), Gaps = 5/244 (2%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR R+ + A    + +   G+KPD+  Y T++NGL K GD+  A  + DEM   G++ + 
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWD 230
           + Y  LIDG+ K+GD   A EI + +  E  V  NV  +  +I+G C+ GR  +      
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA-FTALISGFCRDGRVRDAERTLR 457

Query: 231 RMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAG 290
            M +   + D  TY   I G CK GNV+   ++ +EM  +G     +TYN +++G C+ G
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 291 KIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHG 349
           ++K    L E M   G   + ++YNIL+ G  +NGK ++   + +L  EK    D   + 
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYT 574

Query: 350 VLIN 353
            L++
Sbjct: 575 SLVS 578


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 245/514 (47%), Gaps = 56/514 (10%)

Query: 108 GILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVE 167
           GI+ + + +      +  ++  G+KPDVY+   +IN L      +   +V   MF+ GV+
Sbjct: 79  GIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVD 138

Query: 168 TNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLE 227
                                               P VVT+  +INGLC  G       
Sbjct: 139 ------------------------------------PTVVTFATLINGLCAEGNVARAAR 162

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAV-TYNAMIDGF 286
             D ++    + +S+TY + I+GLCKAG+  GA     ++      +D V  Y+ ++D  
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 287 CRAGKIKECFELWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADS 345
           C+ G + E   L+  M  KG   ++V+YN LI GL   G+  EA ++   +  K    + 
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 346 TTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLM 405
            T  VL++  CK+G +++A                   +++  M   G + +  T NS++
Sbjct: 283 QTFNVLVDNFCKDGMISRA------------------KTIMGFMVHVGVEPDVVTYNSVI 324

Query: 406 NGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
           +G    S++ +A+ +F+ M  KG  P +V+Y++LI+G CK +   +A   + EM+  G  
Sbjct: 325 SGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLN 384

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
           PD++T+S LI G C++ K + A +L C   +    P++    I++ GL       +A+ L
Sbjct: 385 PDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISL 444

Query: 526 YSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGLCS 585
           +  M+K N   N+V YN ++DG+   G  + A E+++ +  + ++ D+++Y   +KGLC 
Sbjct: 445 FREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCK 504

Query: 586 CSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
              + DA   L      G LP   T+++ VR ++
Sbjct: 505 EGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLL 538



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 215/423 (50%), Gaps = 20/423 (4%)

Query: 202 VYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAE 261
           + P+V T  ++IN LC          +   M K   +    T+ + I+GLC  GNV  A 
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIK-ECFELWEVMGRKGCLNVV-SYNILIRG 319
           R    + + G   ++ TY A+I+G C+AG        L ++ GR   L+VV +Y+ ++  
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221

Query: 320 LLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
           L ++G V EA++++  +  K    D   +  LI+GLC                    GR 
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCN------------------FGRW 263

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
            +A +L+  M + G   N  T N L++ F +   +  A  +   M   G  P VV+YN++
Sbjct: 264 KEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSV 323

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGF 499
           I+G C + + G+A    + M+ KG+ P+++TYS LI+G C++K I+ AL L  + +  G 
Sbjct: 324 ISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGL 383

Query: 500 TPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALE 559
            PDV  ++ LI G C AGK E A +L+  M + +  PNL T   ++DGLFK     +A+ 
Sbjct: 384 NPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAIS 443

Query: 560 IWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVM 619
           ++  + +  L  +++ YNI L G+CS  +++DA E  +    +GI    + +  +++ + 
Sbjct: 444 LFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503

Query: 620 NNG 622
             G
Sbjct: 504 KEG 506



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 213/449 (47%), Gaps = 19/449 (4%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC           L  +++ G+ P V ++ T+INGL   G++  A    D + + G ++N
Sbjct: 116 LCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSN 175

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
              Y  +I+G  K GD   A    E++         V+ Y+ +++ LCK G   E L ++
Sbjct: 176 SYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLF 235

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
             M     + D   Y S IHGLC  G  + A  +   M+  GI  +  T+N ++D FC+ 
Sbjct: 236 SGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKD 295

Query: 290 GKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           G I     +   M   G   +VV+YN +I G     ++ +A+ ++EL+  K    +  T+
Sbjct: 296 GMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTY 355

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
             LI+G CK   +NKA+ +L E                  M   G   +  T ++L+ GF
Sbjct: 356 SSLIHGWCKTKNINKALFLLGE------------------MVNSGLNPDVVTWSTLIGGF 397

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +A K E A  LF  M      P + +   +++GL K +   EA S  +EM +   + ++
Sbjct: 398 CKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNV 457

Query: 469 ITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSN 528
           + Y+++++G+C   K++ A +L      KG   DV  Y  +I GLC  G ++DA  L   
Sbjct: 458 VIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMK 517

Query: 529 MKKRNCVPNLVTYNTLMDGLFKTGDCDKA 557
           M++  C+PN  TYN  + GL +  D  ++
Sbjct: 518 MEENGCLPNEFTYNVFVRGLLQRYDISRS 546



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 181/375 (48%), Gaps = 20/375 (5%)

Query: 110 LCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETN 169
           LC+     +A    + +  KG++PD+ +Y ++I+GL   G    A  +   M  +G+  N
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281

Query: 170 VVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMW 229
           V  +N+L+D F K G   RAK I   +V    V P+VVTYN +I+G C   +  + ++++
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMV-HVGVEPDVVTYNSVISGHCLLSQMGDAVKVF 340

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           + M       +  TY S IHG CK  N+  A  +  EMV SG+  D VT++ +I GFC+A
Sbjct: 341 ELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400

Query: 290 GKIKECFELWEVMGRKG-CLNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTH 348
           GK +   EL+  M       N+ +  I++ GL +     EAIS++  + + N   +   +
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 349 GVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGF 408
            ++++G+C  G LN                  DA  L + +   G K++     +++ G 
Sbjct: 461 NIVLDGMCSFGKLN------------------DAQELFSCLPSKGIKIDVVAYTTMIKGL 502

Query: 409 IQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDM 468
            +   L++A  L  +M   GC P   +YN  + GL +      +  ++  M  KG   D 
Sbjct: 503 CKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADA 562

Query: 469 ITYSLLINGLCQSKK 483
            T  LLI+    +K+
Sbjct: 563 TTTELLISYFSANKE 577



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 36/244 (14%)

Query: 415 ENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLL 474
           E A+  F +M      P    +  L   + K++ +    S +K +   G KPD+ T +++
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 475 INGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNM----- 529
           IN LC          +     + G  P V  +  LI+GLC+ G V  A +   ++     
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 530 ------------------------------KKRNC-VPNLVTYNTLMDGLFKTGDCDKAL 558
                                         K RNC +  ++ Y+T+MD L K G   +AL
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
            +++ +  + ++PD+++YN  + GLC+  R  +A   L + + +GI+P   T+++LV   
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 619 MNNG 622
             +G
Sbjct: 293 CKDG 296


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/604 (26%), Positives = 279/604 (46%), Gaps = 38/604 (6%)

Query: 11  LLKAEKNPHTALALFDSATREPGYAHSPHLFHHILRRLIDPKLVVHVSRILELIEIQKCY 70
           +L+++ +   AL  F  A R+  Y H P +++ +L  L   KL     R+L L++ +  Y
Sbjct: 180 VLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIY 239

Query: 71  CPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGIL---------CRKRQFEKAKR 121
              +    V+ +Y +      AL V   M    G E  +L          R  + EKA R
Sbjct: 240 RTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA-GVEPNLLICNTTIDVFVRANRLEKALR 298

Query: 122 FLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFF 181
           FL  +   G+ P+V +Y  +I G      +  A+ + ++M  +G   + V Y  ++    
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358

Query: 182 KKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDS 241
           K+   +  +++ +++  E  + P+ VTYN +I+ L K    DE L      ++     D 
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418

Query: 242 FTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEV 301
             Y + +H LCK G +  A+ +  EM       D VTY A+++GFCR G++ +  +L +V
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 475

Query: 302 MGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGY 360
           M   G   N VSY  L+ G+   GK  EA  +  +  E   + +S T+ V+++GL + G 
Sbjct: 476 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 535

Query: 361 LNKAIQILNEVEEGG-----------------EGRLADAASLVNRMDKHGCKLNAYTCNS 403
           L++A  ++ E+   G                 +GR  +A   +      GC +N     +
Sbjct: 536 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 595

Query: 404 LMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKG 463
           +++GF Q  +L+ A+ +  +M        V +Y TL++ L K  R  EA   +K+ML KG
Sbjct: 596 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 655

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
             P  +TY  +I+  CQ  K+D  + +  + + +      T+YN +I  LC  GK+E+A 
Sbjct: 656 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR--TIYNQVIEKLCVLGKLEEAD 713

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDI-----ISYNI 578
            L   + +     +  T   LM+G  K G    A ++   +    L PD+     +S  +
Sbjct: 714 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 773

Query: 579 TLKG 582
            LKG
Sbjct: 774 VLKG 777



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 225/486 (46%), Gaps = 24/486 (4%)

Query: 132 KPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKE 191
           + D   Y +++  L K+    G+  V   M  RG+      ++ ++  + + G    A +
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263

Query: 192 IWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGL 251
           +   L+    V PN++  N  I+   +  R ++ L   +RM+      +  TY   I G 
Sbjct: 264 VLT-LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 252 CKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGCL--N 309
           C    VE A  +  +M   G   D V+Y  ++   C+  +I E  +L + M ++  L  +
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382

Query: 310 VVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILN 369
            V+YN LI  L ++   DEA+   +  +EK    D   +  +++ LCK            
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK------------ 430

Query: 370 EVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGC 429
                 EGR+++A  L+N MD   C  +  T  +++NGF +  +++ A  L + M   G 
Sbjct: 431 ------EGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 481

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P  VSY  L+NG+C+  +  EA   +    E  W P+ ITYS++++GL +  K+  A  
Sbjct: 482 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 541

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           +  + + KGF P     N+L+  LC  G+  +A +       + C  N+V + T++ G  
Sbjct: 542 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 601

Query: 550 KTGDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTI 609
           +  + D AL + + +       D+ +Y   +  L    R+++A E +   L +GI PT +
Sbjct: 602 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 661

Query: 610 TWHILV 615
           T+  ++
Sbjct: 662 TYRTVI 667



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 29/427 (6%)

Query: 109 ILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVET 168
           +L +    ++A  FL    EKG + D   Y  +++ L K G +  A  + +EM       
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPP 448

Query: 169 NVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVY-PNVVTYNVMINGLCKCGRFDECLE 227
           +VV Y  +++GF + G+  +AK++ +  VM T  + PN V+Y  ++NG+C+ G+  E  E
Sbjct: 449 DVVTYTAVVNGFCRLGEVDKAKKLLQ--VMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 506

Query: 228 MWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFC 287
           M +  +++    +S TY   +HGL + G +  A  V REMV  G F   V  N ++   C
Sbjct: 507 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 566

Query: 288 RAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAISIWELLREKNCNADST 346
           R G+  E  +  E    KGC +NVV++  +I G  +N ++D A+S+ + +   N +AD  
Sbjct: 567 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 626

Query: 347 THGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMN 406
           T+  L++ L                  G +GR+A+A  L+ +M   G      T  ++++
Sbjct: 627 TYTTLVDTL------------------GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 668

Query: 407 GFIQASKLENAIFLFKEM-SRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWK 465
            + Q  K+++ + + ++M SR+ C      YN +I  LC + +  EA + + ++L    +
Sbjct: 669 RYCQMGKVDDLVAILEKMISRQKCRTI---YNQVIEKLCVLGKLEEADTLLGKVLRTASR 725

Query: 466 PDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQL 525
            D  T   L+ G  +      A K+ C+   +   PDV M   L   L   GKV++A +L
Sbjct: 726 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKL 785

Query: 526 YSNMKKR 532
              + +R
Sbjct: 786 MLRLVER 792



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 4/249 (1%)

Query: 377 GRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSY 436
           G+L DA  ++  M + G + N   CN+ ++ F++A++LE A+   + M   G  P VV+Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315

Query: 437 NTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQ 496
           N +I G C + R  EA   +++M  KG  PD ++Y  ++  LC+ K+I     L  +  +
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375

Query: 497 K-GFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCD 555
           + G  PD   YN LIH L      ++AL    + +++    + + Y+ ++  L K G   
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435

Query: 556 KALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           +A ++ N   E    PD+++Y   + G C    +  A + L      G  P T+++  L+
Sbjct: 436 EAKDLIN---EMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 492

Query: 616 RAVMNNGAS 624
             +   G S
Sbjct: 493 NGMCRTGKS 501



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 77/152 (50%)

Query: 464 WKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDAL 523
           ++ D + Y  ++  L ++K    + ++     ++G       ++ ++     AG++ DAL
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 524 QLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLKGL 583
           ++ + M++    PNL+  NT +D   +    +KAL     +    + P++++YN  ++G 
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 584 CSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           C   R+ +A E L D   +G LP  ++++ ++
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 237/466 (50%), Gaps = 37/466 (7%)

Query: 154 ALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMI 213
           A  +F+ M    ++ N++  N LI+   +   Y     +     +  +++ NV+ + V  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVR---YPSKPSV----CLSKAIFTNVIKFGVK- 205

Query: 214 NGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH--GLCKAGNVEGAERVYREMVESG 271
                  +  E + +  +MK      D+ +Y + +    LC++G  + +     E++ESG
Sbjct: 206 ------NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESG 259

Query: 272 IFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYNILIRGLLENGKVDEAI 330
           +    +TYN +I G+CR G++++ F+    M  K    ++ + NIL+RGL   G +D A+
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319

Query: 331 SIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEE----------------- 373
            ++     K    D+ T+  +I+GLCK G   +A  +L E+EE                 
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCAL 379

Query: 374 -GGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPT 432
              EG++  A    N+M +   K + +TCN L+ G      L+NA+ LF     KG +  
Sbjct: 380 ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439

Query: 433 VVSYNTLINGLCKVERFGEAYSFVKEMLEK-GWKPDMITYSLLINGLCQSKKIDMALKLC 491
            V+YNT+I+GLCK  RF EA+  + EM EK G  PD  TY+ +I G C+  +++ A +  
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFR 499

Query: 492 CQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT 551
            + ++K F PD+   NIL+ GLC  G +  AL+L++    +    + VTYNT++ GL K 
Sbjct: 500 NKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKE 559

Query: 552 GDCDKALEIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLN 597
           G  ++A ++   + E++L PD  +YN  L  L    RM +A EF++
Sbjct: 560 GRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMS 604



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 239/483 (49%), Gaps = 35/483 (7%)

Query: 78  SVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDVYS 137
           + I AY   + P  A  +F RM  +   +  +L R          +N+L     KP V  
Sbjct: 140 TSIGAYVSCNRPHHAAQIFNRMKRLH-LKPNLLTRNT-------LINALVRYPSKPSVCL 191

Query: 138 YGTVINGLVKSG---DLLGALAVFDEMFERGVETNVVCYNILIDGFF--KKGDYMRAKEI 192
              +   ++K G    L  A+ +  +M +     +   YN ++D  +  + G   ++ + 
Sbjct: 192 SKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDK 251

Query: 193 WERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLC 252
              L +E+ + P+ +TYN +I+G C+ G+ ++  +  ++M +   + D FT    + GLC
Sbjct: 252 LNEL-LESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLC 310

Query: 253 KAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELW-EVMGRKGCLNVV 311
             G ++ A +++   +  G  +DAVTYN +I G C+ G+ +E F+L  E+  +K   +  
Sbjct: 311 TEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCY 370

Query: 312 SYNILIRGLLE-NGKVDEAISIWELLREKNCNADSTTHGVLINGLCKNGYLNKAIQILNE 370
           +YN ++  L +  G+V++A      + EK+   D  T  +L+ GLC  G L+ A+++ N 
Sbjct: 371 TYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 430

Query: 371 VEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GC 429
               G+                   ++A T N++++G  +  + E A  L  EM  K G 
Sbjct: 431 WISKGKA------------------IDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGL 472

Query: 430 SPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALK 489
            P   +YNT+I G C+  +  +A+ F  +M+EK +KPD+ T ++L+ GLC+   +  ALK
Sbjct: 473 VPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALK 532

Query: 490 LCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLF 549
           L   ++ KG   D   YN +I GLC  G+ E+A  L + MK++   P+  TYN ++  L 
Sbjct: 533 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALA 592

Query: 550 KTG 552
             G
Sbjct: 593 DAG 595



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 223/466 (47%), Gaps = 36/466 (7%)

Query: 36  HSPHLFHHILRRLIDPKLVVHVSRILELIEI--QKCYCPEDVALSVIQAYGKNSMPDKAL 93
           H+  +F+ + R  + P L+   + I  L+    +   C      + +  +G  +   +A+
Sbjct: 153 HAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAI 212

Query: 94  DVFQRMNEIFGC-----------EAGILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVI 142
            +  +M + F C           +   LCR  + +++   LN L E GL P   +Y T+I
Sbjct: 213 GLIGKMKD-FSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTII 271

Query: 143 NGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSV 202
           +G  + G +  A    ++M E+  + ++   NIL+ G   +G    A +++   + +   
Sbjct: 272 HGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKA 331

Query: 203 YPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKA-GNVEGAE 261
             + VTYN +I+GLCK GRF+E  ++   M++ +   D +TY + +  L  A G VE A 
Sbjct: 332 I-DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAF 390

Query: 262 RVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKG-CLNVVSYNILIRGL 320
           +   +MVE     D  T N ++ G C  G +    +L+     KG  ++ V+YN +I GL
Sbjct: 391 QFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGL 450

Query: 321 LENGKVDEAISIWELLREKN-CNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRL 379
            + G+ +EA  +   + EKN    D TT+  +I G C+ G + KA Q             
Sbjct: 451 CKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQ------------- 497

Query: 380 ADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTL 439
                  N+M +   K + +TCN L+ G  +   L  A+ LF     KG +   V+YNT+
Sbjct: 498 -----FRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTI 552

Query: 440 INGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKID 485
           I+GLCK  RF EA+  + EM EK   PD  TY+ ++  L  + +++
Sbjct: 553 ISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 111 CRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNV 170
           CR+ Q EKA +F N + EK  KPD+++   ++ GL   G L  AL +F+    +G   + 
Sbjct: 275 CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 334

Query: 171 VCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKC-GRFDECLEMW 229
           V YN +I G  K+G +  A ++   +  E  + P+  TYN ++  L    G+ ++  +  
Sbjct: 335 VTYNTIISGLCKEGRFEEAFDLLAEM-EEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 230 DRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMIDGFCRA 289
           ++M +   + D FT    + GLC  G ++ A +++   +  G  +DAVTYN +I G C+ 
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 453

Query: 290 GKIKECFELWEVMGRKGCL--NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTT 347
           G+ +E F+L   M  K  L  +  +YN +I G    G+V++A      + EK+   D  T
Sbjct: 454 GRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFT 513

Query: 348 HGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNG 407
             +L+ GLC+ G L KA+++ N     G+                   ++A T N++++G
Sbjct: 514 CNILLRGLCREGMLVKALKLFNTWISKGKA------------------IDAVTYNTIISG 555

Query: 408 FIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEM 459
             +  + E A  L  EM  K   P   +YN ++  L    R  EA  F+ ++
Sbjct: 556 LCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 160/302 (52%), Gaps = 9/302 (2%)

Query: 329 AISIWELLREKNCNADSTTHGVLINGLCKNGY-----LNKAIQILNEVEEGGEGRLADAA 383
           A  I+  ++  +   +  T   LIN L +        L+KAI   N ++ G + +L++A 
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAI-FTNVIKFGVKNKLSEAI 212

Query: 384 SLVNRMDKHGCKLNAYTCNSLMN--GFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLIN 441
            L+ +M    C  +  + N++++     ++ K + +I    E+   G  P  ++YNT+I+
Sbjct: 213 GLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIH 272

Query: 442 GLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTP 501
           G C+  +  +A+ F  +M+EK +KPD+ T ++L+ GLC    +D ALKL   ++ KG   
Sbjct: 273 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 332

Query: 502 DVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKT-GDCDKALEI 560
           D   YN +I GLC  G+ E+A  L + M+++   P+  TYN ++  L    G  +KA + 
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQF 392

Query: 561 WNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAVMN 620
            N ++E+  +PD+ + NI L+GLC+   + +A +  N  + +G     +T++ ++  +  
Sbjct: 393 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452

Query: 621 NG 622
            G
Sbjct: 453 EG 454



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 24/244 (9%)

Query: 403 SLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEK 462
           SL+  FI A +             K      V  +T I       R   A      M   
Sbjct: 105 SLLTAFISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRL 164

Query: 463 GWKPDMITYSLLINGL---------CQSK-------------KIDMALKLCCQFLQKGFT 500
             KP+++T + LIN L         C SK             K+  A+ L  +       
Sbjct: 165 HLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCF 224

Query: 501 PDVTMYNILIH--GLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKAL 558
           PD   YN ++    LC +GK + ++   + + +   VP+ +TYNT++ G  + G  +KA 
Sbjct: 225 PDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAF 284

Query: 559 EIWNHILEERLRPDIISYNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILVRAV 618
           +  N ++E+  +PD+ + NI L+GLC+   + +A +  N  + +G     +T++ ++  +
Sbjct: 285 QFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGL 344

Query: 619 MNNG 622
              G
Sbjct: 345 CKEG 348


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 251/524 (47%), Gaps = 46/524 (8%)

Query: 73  EDVALSVIQAYGKNSMPD---KALDVFQRMNE-----IFGCEAGILCRK-----RQFEKA 119
           E + +++++  G+  M     K LD+  +  E     IF     +L ++     R+F + 
Sbjct: 11  ESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRK 70

Query: 120 KRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDG 179
           K  +N     G+  D Y++G ++ GL  +  +  A  +   M  RG   N V YN +I  
Sbjct: 71  KMMMN-----GVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHA 125

Query: 180 FFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREK 239
             K G   RA     R +M   V P+ VT+NV+I+  C+     + L + ++        
Sbjct: 126 LCKNGKVGRA-----RSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 180

Query: 240 DSFTYCSFIHGLCKAGNV-EGAERVYREMVES-GIFVDAVTYNAMIDGFCRAGKIKECFE 297
           D  T    +  LCKAG V EG E + R  VES G  VD V YN +I GFC  GK K    
Sbjct: 181 DVVTATKVVGILCKAGRVTEGVEVLER--VESMGGVVDVVAYNTLIKGFCMLGKAKVGHR 238

Query: 298 LWEVMGRKGCL-NVVSYNILIRGLLENGKVDEAISIWELLREKNCNADSTTHGVLINGLC 356
           + + M  KGCL NV +YNIL  G  ++G +D AI ++  ++    N +  T+  LI GLC
Sbjct: 239 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC 298

Query: 357 KNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLEN 416
             G +    +IL  +EE   G               G +++ Y  NS++ G  + ++ E 
Sbjct: 299 SGGRMEDGFKILELMEESRGG--------------AGGRISPY--NSIIYGLYKKNQFEE 342

Query: 417 AIFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSFVKEMLEKGWKPDMITYSLLIN 476
           A+    +M +    P  V  +  I G C     G+A     +M+++G  P ++ Y  LI+
Sbjct: 343 ALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIH 400

Query: 477 GLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVP 536
           G CQ   +  A +L  + +  G+ P    +N LI   C  GKV  AL+L  +M  R C+P
Sbjct: 401 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 460

Query: 537 NLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 580
           ++ +Y+ ++D L   GD  KA+ ++  ++E+ + PD  ++N  L
Sbjct: 461 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 227/520 (43%), Gaps = 55/520 (10%)

Query: 130 GLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRA 189
           G  PD   + T++ GL ++  +   + V D + + G   ++  +N ++D   K+ D   A
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE-DIDLA 64

Query: 190 KEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIH 249
           +E + + +M   V  +  T+ +++ GLC   R  +  ++   MK   +  ++  Y + IH
Sbjct: 65  REFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIH 124

Query: 250 GLCKAGNVEGAERVYREMVES-------------------------------GIFVDAVT 278
            LCK G V  A  +  EMVE                                G   D VT
Sbjct: 125 ALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 184

Query: 279 YNAMIDGFCRAGKIKECFELWE-VMGRKGCLNVVSYNILIRGLLENGKVDEAISIWELLR 337
              ++   C+AG++ E  E+ E V    G ++VV+YN LI+G    GK      + + + 
Sbjct: 185 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDME 244

Query: 338 EKNCNADSTTHGVLINGLCKNGYLNKAIQILNEVEEGGEGRLADAASLVNRMDKHGCKLN 397
            K C  +  T+ +L +G C +G L+ AI + N+                  M   G   N
Sbjct: 245 IKGCLPNVDTYNILASGYCDSGMLDSAIDLFND------------------MKTDGINWN 286

Query: 398 AYTCNSLMNGFIQASKLENA--IFLFKEMSRKGCSPTVVSYNTLINGLCKVERFGEAYSF 455
             T ++L+ G     ++E+   I    E SR G    +  YN++I GL K  +F EA  F
Sbjct: 287 FMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEF 346

Query: 456 VKEMLEKGWKPDMITYSLLINGLCQSKKIDMALKLCCQFLQKGFTPDVTMYNILIHGLCS 515
           + +M EK + P  +  SL I G C    I  A ++  Q +++G  P V +Y  LIHG C 
Sbjct: 347 LTKM-EKLF-PRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQ 404

Query: 516 AGKVEDALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIIS 575
            G V +A +L + M      P   T+N L+      G    AL++   ++     PD+ S
Sbjct: 405 DGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGS 464

Query: 576 YNITLKGLCSCSRMSDAFEFLNDALCRGILPTTITWHILV 615
           Y+  +  LC+      A       + + ILP   TW+ ++
Sbjct: 465 YSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 227/518 (43%), Gaps = 79/518 (15%)

Query: 32  PGYAHSP---HLFHHILRRLIDPKLVVHVSRILELI-------------EIQKCYCPEDV 75
           P    SP    +F  I+R L   ++V  + ++L+LI              I      ED+
Sbjct: 2   PSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDI 61

Query: 76  ALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGILCRKRQFEKAKRFLNSLWEKGLKPDV 135
            L+  + Y K  M    ++     +  FG     LC   +   A + L  +  +G  P+ 
Sbjct: 62  DLAR-EFYRKKMM----MNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNT 116

Query: 136 YSYGTVINGLVKSGDLLGALAVFDEMFERGVETNVVCYNILIDGFFKKGDYMRAKEIWER 195
             Y T+I+ L K+G +  A ++ +EM    VE + V +N+LI  + ++ + ++A  + E+
Sbjct: 117 VIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEK 172

Query: 196 LVMETSVYPNVVTYNVMINGLCKCGRFDECLEMWDRMKKNEREKDSFTYCSFIHGLCKAG 255
                   P+VVT   ++  LCK GR  E +E+ +R++      D   Y + I G C  G
Sbjct: 173 -SFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLG 231

Query: 256 NVEGAERVYREMVESGIFVDAVTYNAMIDGFCRAGKIKECFELWEVMGRKGC-LNVVSYN 314
             +   RV ++M   G   +  TYN +  G+C +G +    +L+  M   G   N ++Y+
Sbjct: 232 KAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYD 291

Query: 315 ILIRGLLENGKVDEAISIWELLREKNCNADS--TTHGVLINGLCKNGYLNKAIQILNEVE 372
            LIRGL   G++++   I EL+ E    A    + +  +I GL K     +A++ L ++E
Sbjct: 292 TLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME 351

Query: 373 ----------------------------------EGG----------------EGRLADA 382
                                             EGG                +G + +A
Sbjct: 352 KLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREA 411

Query: 383 ASLVNRMDKHGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRKGCSPTVVSYNTLING 442
             L+N M  HG    A T N+L++ F    K+ +A+ L ++M  +GC P + SY+ +++ 
Sbjct: 412 FELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDA 471

Query: 443 LCKVERFGEAYSFVKEMLEKGWKPDMITYSLLINGLCQ 480
           LC    F +A     +M+EK   PD  T++ ++  L Q
Sbjct: 472 LCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQ 509


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.139    0.427 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,634,701,354
Number of Sequences: 23463169
Number of extensions: 398520128
Number of successful extensions: 1252037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8328
Number of HSP's successfully gapped in prelim test: 4512
Number of HSP's that attempted gapping in prelim test: 891803
Number of HSP's gapped (non-prelim): 96972
length of query: 625
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 476
effective length of database: 8,863,183,186
effective search space: 4218875196536
effective search space used: 4218875196536
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)