Query 038113
Match_columns 112
No_of_seqs 166 out of 1045
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 13:00:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 1.1E-29 3.9E-34 179.2 12.6 108 1-112 237-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 4.1E-26 1.4E-30 161.6 13.5 112 1-112 253-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 2.7E-25 9.1E-30 157.5 13.5 112 1-112 255-366 (368)
4 3lst_A CALO1 methyltransferase 99.9 1.5E-22 5E-27 142.3 12.2 107 1-112 241-347 (348)
5 1zg3_A Isoflavanone 4'-O-methy 99.9 2.3E-22 7.9E-27 141.7 11.8 111 1-112 245-358 (358)
6 3gwz_A MMCR; methyltransferase 99.9 2.4E-22 8.1E-27 142.3 11.2 106 1-112 261-368 (369)
7 3i53_A O-methyltransferase; CO 99.9 2.4E-22 8E-27 140.3 10.1 103 1-112 228-331 (332)
8 1fp2_A Isoflavone O-methyltran 99.9 1.8E-21 6E-26 136.9 12.2 110 1-112 240-352 (352)
9 2ip2_A Probable phenazine-spec 99.9 1.5E-21 5.2E-26 136.1 11.6 107 1-112 226-333 (334)
10 1fp1_D Isoliquiritigenin 2'-O- 99.9 8.7E-22 3E-26 139.4 10.1 111 1-112 261-372 (372)
11 3dp7_A SAM-dependent methyltra 99.8 2E-20 6.9E-25 132.2 9.6 108 4-112 244-354 (363)
12 3mcz_A O-methyltransferase; ad 99.8 1.2E-19 4.1E-24 127.3 10.3 103 5-112 245-348 (352)
13 1tw3_A COMT, carminomycin 4-O- 99.8 1.4E-19 4.7E-24 127.3 8.1 107 1-112 242-355 (360)
14 1qzz_A RDMB, aclacinomycin-10- 99.8 2.7E-19 9.3E-24 126.2 8.0 107 1-112 241-355 (374)
15 2r3s_A Uncharacterized protein 99.8 9.9E-19 3.4E-23 121.6 9.9 105 4-111 228-333 (335)
16 1x19_A CRTF-related protein; m 99.8 4.1E-18 1.4E-22 120.0 12.0 102 4-112 253-358 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.4 7.2E-13 2.4E-17 90.0 7.4 106 7-112 139-256 (261)
18 3dtn_A Putative methyltransfer 99.4 3.4E-12 1.2E-16 84.4 8.6 102 9-112 111-225 (234)
19 3dh0_A SAM dependent methyltra 99.3 3.8E-11 1.3E-15 78.5 9.8 85 9-112 108-192 (219)
20 3ou2_A SAM-dependent methyltra 99.2 7.6E-11 2.6E-15 76.8 8.4 90 9-100 109-204 (218)
21 1xtp_A LMAJ004091AAA; SGPP, st 99.2 9.3E-11 3.2E-15 78.1 8.2 80 9-102 160-239 (254)
22 3i9f_A Putative type 11 methyl 99.2 7.6E-11 2.6E-15 74.4 7.0 82 9-111 77-158 (170)
23 3hnr_A Probable methyltransfer 99.2 2.8E-10 9.5E-15 74.4 9.5 103 9-112 108-211 (220)
24 1kpg_A CFA synthase;, cyclopro 99.1 1.8E-10 6.1E-15 78.3 8.4 97 5-101 126-228 (287)
25 3dlc_A Putative S-adenosyl-L-m 99.1 1.5E-11 5E-16 80.1 2.8 97 9-108 113-210 (219)
26 2ex4_A Adrenal gland protein A 99.1 2.2E-10 7.7E-15 76.1 8.4 79 9-102 148-226 (241)
27 3ujc_A Phosphoethanolamine N-m 99.1 2.2E-10 7.5E-15 76.6 8.3 85 9-101 122-206 (266)
28 3h2b_A SAM-dependent methyltra 99.1 2.6E-10 9E-15 73.7 7.7 81 9-103 104-184 (203)
29 3pfg_A N-methyltransferase; N, 99.1 5.9E-11 2E-15 79.8 4.1 104 9-112 112-248 (263)
30 3bxo_A N,N-dimethyltransferase 99.1 6.2E-11 2.1E-15 78.3 4.1 104 9-112 102-238 (239)
31 1vl5_A Unknown conserved prote 99.1 1.6E-10 5.6E-15 77.5 6.2 86 9-101 105-190 (260)
32 3dli_A Methyltransferase; PSI- 99.1 1.1E-09 3.6E-14 72.8 9.8 88 4-102 96-185 (240)
33 1ve3_A Hypothetical protein PH 99.1 1.1E-10 3.6E-15 76.6 4.2 102 9-112 105-226 (227)
34 3lcc_A Putative methyl chlorid 99.1 5.9E-10 2E-14 73.7 7.6 75 9-102 134-208 (235)
35 2o57_A Putative sarcosine dime 99.1 5.8E-10 2E-14 76.1 7.8 83 9-101 152-234 (297)
36 1xxl_A YCGJ protein; structura 99.1 2.7E-10 9.1E-15 75.8 5.9 86 9-101 89-174 (239)
37 2fk8_A Methoxy mycolic acid sy 99.0 1.7E-09 5.7E-14 74.6 9.5 97 5-101 152-254 (318)
38 3bus_A REBM, methyltransferase 99.0 6.7E-10 2.3E-14 74.8 7.4 86 9-101 131-216 (273)
39 2qe6_A Uncharacterized protein 99.0 7E-10 2.4E-14 75.7 7.2 81 8-97 158-238 (274)
40 3ocj_A Putative exported prote 99.0 2.4E-09 8.1E-14 73.6 9.5 104 9-112 189-303 (305)
41 3e23_A Uncharacterized protein 99.0 9.1E-10 3.1E-14 71.6 6.9 78 9-101 104-182 (211)
42 3sm3_A SAM-dependent methyltra 99.0 1.2E-09 4.3E-14 71.6 7.3 90 9-101 103-207 (235)
43 3l8d_A Methyltransferase; stru 99.0 1.8E-09 6E-14 71.4 7.6 83 9-101 118-200 (242)
44 4fsd_A Arsenic methyltransfera 99.0 1.9E-09 6.5E-14 76.5 7.9 88 4-100 161-250 (383)
45 2zfu_A Nucleomethylin, cerebra 99.0 1.8E-09 6E-14 70.5 6.9 74 9-112 117-190 (215)
46 3g2m_A PCZA361.24; SAM-depende 99.0 1E-09 3.5E-14 75.1 5.9 104 9-112 152-291 (299)
47 3mgg_A Methyltransferase; NYSG 98.9 1.5E-09 5.1E-14 73.3 6.3 88 9-101 107-198 (276)
48 1vlm_A SAM-dependent methyltra 98.9 8.4E-09 2.9E-13 67.6 9.1 85 9-101 104-188 (219)
49 2aot_A HMT, histamine N-methyl 98.9 5.1E-09 1.7E-13 71.5 8.0 82 9-98 137-218 (292)
50 2ld4_A Anamorsin; methyltransf 98.9 4.8E-09 1.6E-13 66.5 7.1 63 9-93 65-128 (176)
51 2p7i_A Hypothetical protein; p 98.9 4.9E-09 1.7E-13 69.2 7.1 89 9-101 105-199 (250)
52 3hem_A Cyclopropane-fatty-acyl 98.9 9.9E-09 3.4E-13 70.3 8.9 94 9-102 139-244 (302)
53 1nkv_A Hypothetical protein YJ 98.9 3.7E-09 1.3E-13 70.5 6.1 83 9-101 105-187 (256)
54 3vc1_A Geranyl diphosphate 2-C 98.9 6.2E-09 2.1E-13 71.7 7.3 83 9-101 187-269 (312)
55 1y8c_A S-adenosylmethionine-de 98.9 4.9E-09 1.7E-13 69.2 6.5 104 9-112 103-244 (246)
56 3d2l_A SAM-dependent methyltra 98.9 1.3E-08 4.4E-13 67.2 8.5 104 9-112 98-242 (243)
57 3bkw_A MLL3908 protein, S-aden 98.9 2.9E-08 1E-12 65.5 10.1 91 9-101 109-214 (243)
58 3e8s_A Putative SAM dependent 98.9 3.8E-09 1.3E-13 68.9 5.7 89 9-100 118-208 (227)
59 2a14_A Indolethylamine N-methy 98.9 4.2E-09 1.4E-13 71.1 6.0 80 8-101 157-238 (263)
60 3f4k_A Putative methyltransfer 98.9 6.4E-09 2.2E-13 69.4 6.7 82 9-102 116-197 (257)
61 3cc8_A Putative methyltransfer 98.8 3.4E-09 1.2E-13 69.2 4.7 88 9-101 95-185 (230)
62 3g5l_A Putative S-adenosylmeth 98.8 6.3E-09 2.2E-13 69.4 5.7 91 9-101 110-216 (253)
63 3bkx_A SAM-dependent methyltra 98.8 2.5E-08 8.5E-13 67.1 8.5 90 9-101 124-219 (275)
64 3kkz_A Uncharacterized protein 98.8 1E-08 3.5E-13 69.0 6.4 82 9-102 116-197 (267)
65 4htf_A S-adenosylmethionine-de 98.8 5.1E-09 1.7E-13 71.1 4.3 92 9-102 138-233 (285)
66 2p8j_A S-adenosylmethionine-de 98.8 6.4E-09 2.2E-13 67.3 4.4 88 9-98 91-180 (209)
67 2xvm_A Tellurite resistance pr 98.8 2E-08 7E-13 64.3 6.3 74 9-100 99-172 (199)
68 2i62_A Nicotinamide N-methyltr 98.7 1.8E-08 6.1E-13 67.3 5.9 80 9-102 159-240 (265)
69 3cgg_A SAM-dependent methyltra 98.7 5.4E-08 1.8E-12 61.9 7.6 66 9-101 109-175 (195)
70 4e2x_A TCAB9; kijanose, tetron 98.7 3.7E-08 1.3E-12 70.3 7.2 82 9-102 173-254 (416)
71 2g72_A Phenylethanolamine N-me 98.7 1.3E-08 4.6E-13 69.3 4.5 79 9-101 176-256 (289)
72 3ege_A Putative methyltransfer 98.7 9.4E-08 3.2E-12 64.2 8.2 83 9-101 96-178 (261)
73 3gu3_A Methyltransferase; alph 98.7 2.6E-08 8.9E-13 67.8 4.9 88 9-100 91-189 (284)
74 3ccf_A Cyclopropane-fatty-acyl 98.6 3.7E-08 1.3E-12 66.6 5.5 89 9-101 119-210 (279)
75 2yqz_A Hypothetical protein TT 98.6 4.3E-08 1.5E-12 65.3 5.6 88 9-100 106-195 (263)
76 1pjz_A Thiopurine S-methyltran 98.6 9.3E-08 3.2E-12 62.2 6.7 74 9-101 103-176 (203)
77 3jwg_A HEN1, methyltransferase 98.6 1.7E-07 5.7E-12 61.2 7.8 81 9-97 104-188 (219)
78 3jwh_A HEN1; methyltransferase 98.6 1.7E-07 5.7E-12 61.1 7.7 81 9-97 104-188 (217)
79 1ri5_A MRNA capping enzyme; me 98.6 1.9E-08 6.4E-13 68.2 3.2 93 9-101 135-250 (298)
80 3ggd_A SAM-dependent methyltra 98.6 2.6E-08 9.1E-13 66.0 3.6 89 8-101 125-219 (245)
81 3giw_A Protein of unknown func 98.5 1.2E-07 4.2E-12 64.8 5.6 80 10-97 163-243 (277)
82 2p35_A Trans-aconitate 2-methy 98.5 1.5E-07 5.1E-12 62.6 5.2 86 9-96 97-185 (259)
83 3thr_A Glycine N-methyltransfe 98.5 5.8E-08 2E-12 66.0 2.2 40 9-48 132-177 (293)
84 2kw5_A SLR1183 protein; struct 98.4 1.5E-06 5.2E-11 55.8 8.6 76 9-101 96-171 (202)
85 2vdw_A Vaccinia virus capping 98.4 7.7E-07 2.6E-11 61.4 5.9 93 9-101 131-246 (302)
86 2gs9_A Hypothetical protein TT 98.3 1.2E-06 4.2E-11 56.6 6.0 75 9-92 97-171 (211)
87 3m70_A Tellurite resistance pr 98.3 1.3E-06 4.4E-11 59.2 5.8 73 9-99 186-258 (286)
88 3g07_A 7SK snRNA methylphospha 98.3 1.2E-07 4.2E-12 64.8 0.5 85 9-101 179-269 (292)
89 3grz_A L11 mtase, ribosomal pr 98.3 1.1E-06 3.8E-11 56.7 4.9 70 9-112 127-196 (205)
90 2gb4_A Thiopurine S-methyltran 98.3 2.2E-06 7.5E-11 57.7 6.5 74 9-101 154-227 (252)
91 1fbn_A MJ fibrillarin homologu 98.1 8.3E-06 2.9E-10 53.7 6.9 79 9-112 145-227 (230)
92 1wzn_A SAM-dependent methyltra 98.1 2.5E-05 8.6E-10 51.7 8.9 37 9-45 107-144 (252)
93 3g5t_A Trans-aconitate 3-methy 97.9 9.4E-06 3.2E-10 55.3 4.3 80 9-94 115-197 (299)
94 1af7_A Chemotaxis receptor met 97.9 6.2E-06 2.1E-10 56.3 3.4 36 9-44 215-250 (274)
95 3bgv_A MRNA CAP guanine-N7 met 97.9 8.7E-06 3E-10 55.9 4.2 93 9-101 116-232 (313)
96 3q87_B N6 adenine specific DNA 97.9 0.00015 5.1E-09 45.6 8.9 69 3-101 72-149 (170)
97 3ofk_A Nodulation protein S; N 97.8 1.5E-05 5.2E-10 51.5 4.1 39 9-47 116-155 (216)
98 1dus_A MJ0882; hypothetical pr 97.8 8.4E-05 2.9E-09 46.8 6.8 73 9-112 121-193 (194)
99 4hg2_A Methyltransferase type 97.8 1.8E-05 6.2E-10 53.4 3.7 44 4-50 94-139 (257)
100 4df3_A Fibrillarin-like rRNA/T 97.7 4.6E-05 1.6E-09 50.9 5.1 78 9-110 149-229 (233)
101 1zx0_A Guanidinoacetate N-meth 97.7 4.8E-06 1.6E-10 54.9 0.1 45 4-48 123-172 (236)
102 1g8a_A Fibrillarin-like PRE-rR 97.7 0.00015 5E-09 47.4 6.8 79 9-112 145-226 (227)
103 2b3t_A Protein methyltransfera 97.7 0.00026 8.8E-09 47.7 8.0 60 23-112 215-275 (276)
104 3evz_A Methyltransferase; NYSG 97.6 0.00021 7.3E-09 46.5 6.7 81 3-111 117-218 (230)
105 3e05_A Precorrin-6Y C5,15-meth 97.6 0.00036 1.2E-08 44.7 7.4 56 8-98 109-164 (204)
106 3hp7_A Hemolysin, putative; st 97.5 0.00012 4E-09 50.5 4.9 81 8-101 152-232 (291)
107 3iv6_A Putative Zn-dependent a 97.5 0.00011 3.8E-09 49.8 4.7 38 9-47 112-149 (261)
108 2ipx_A RRNA 2'-O-methyltransfe 97.5 0.00011 3.9E-09 48.1 4.6 79 9-111 149-230 (233)
109 2nxc_A L11 mtase, ribosomal pr 97.5 0.00032 1.1E-08 46.9 6.2 65 9-107 186-250 (254)
110 3htx_A HEN1; HEN1, small RNA m 97.4 0.0016 5.5E-08 50.9 10.0 92 9-102 798-898 (950)
111 3orh_A Guanidinoacetate N-meth 97.4 5.7E-06 2E-10 54.9 -3.2 73 9-98 130-207 (236)
112 2pxx_A Uncharacterized protein 97.3 7.9E-05 2.7E-09 47.8 2.0 40 9-48 109-161 (215)
113 3p2e_A 16S rRNA methylase; met 97.3 0.00047 1.6E-08 45.4 5.6 85 9-102 96-186 (225)
114 3id6_C Fibrillarin-like rRNA/T 97.3 0.00077 2.6E-08 44.9 6.6 81 8-112 147-230 (232)
115 3bwc_A Spermidine synthase; SA 97.3 0.00057 2E-08 47.0 6.1 68 9-101 171-240 (304)
116 3b5i_A S-adenosyl-L-methionine 97.2 0.0029 9.8E-08 45.0 9.2 96 4-100 145-297 (374)
117 2avn_A Ubiquinone/menaquinone 97.2 0.00012 4.1E-09 48.8 1.8 40 9-49 116-155 (260)
118 4dzr_A Protein-(glutamine-N5) 97.2 0.00081 2.8E-08 42.9 5.5 56 26-110 144-202 (215)
119 1l3i_A Precorrin-6Y methyltran 97.2 0.00056 1.9E-08 42.8 4.7 54 8-95 101-154 (192)
120 1nt2_A Fibrillarin-like PRE-rR 97.1 0.0028 9.7E-08 41.1 7.3 75 9-112 128-209 (210)
121 3uwp_A Histone-lysine N-methyl 97.0 0.00068 2.3E-08 49.0 4.3 44 7-53 252-295 (438)
122 3opn_A Putative hemolysin; str 97.0 0.00056 1.9E-08 45.4 3.4 68 26-101 117-184 (232)
123 2pjd_A Ribosomal RNA small sub 97.0 0.00043 1.5E-08 48.2 2.9 39 9-47 263-304 (343)
124 1m6e_X S-adenosyl-L-methionnin 96.9 0.015 5E-07 41.1 10.6 97 3-99 133-278 (359)
125 3fzg_A 16S rRNA methylase; met 96.9 0.0017 5.9E-08 42.3 4.9 71 9-103 117-189 (200)
126 2h00_A Methyltransferase 10 do 96.8 3E-05 1E-09 51.5 -3.9 84 9-101 142-238 (254)
127 3lcv_B Sisomicin-gentamicin re 96.8 0.0014 4.7E-08 44.8 4.1 73 8-103 199-273 (281)
128 3m33_A Uncharacterized protein 96.8 0.00015 5.1E-09 47.4 -0.8 54 9-100 113-166 (226)
129 3mq2_A 16S rRNA methyltransfer 96.7 0.0012 4.1E-08 42.6 3.4 65 26-101 120-184 (218)
130 2efj_A 3,7-dimethylxanthine me 96.7 0.0069 2.4E-07 43.2 7.5 97 3-99 143-290 (384)
131 3hm2_A Precorrin-6Y C5,15-meth 96.7 0.0016 5.4E-08 40.4 3.6 34 8-47 95-128 (178)
132 3lpm_A Putative methyltransfer 96.7 0.0095 3.3E-07 39.6 7.6 59 24-112 154-218 (259)
133 1rjd_A PPM1P, carboxy methyl t 96.6 0.011 3.8E-07 41.3 7.5 81 9-94 196-281 (334)
134 3eey_A Putative rRNA methylase 96.5 0.0024 8.2E-08 40.5 3.6 41 9-49 95-142 (197)
135 1u2z_A Histone-lysine N-methyl 96.4 0.0033 1.1E-07 45.5 4.3 42 8-52 324-365 (433)
136 1o9g_A RRNA methyltransferase; 96.4 0.0068 2.3E-07 40.0 5.4 39 9-47 170-215 (250)
137 3iei_A Leucine carboxyl methyl 96.4 0.02 6.9E-07 40.0 7.9 89 9-101 193-281 (334)
138 2vz8_A Fatty acid synthase; tr 96.4 0.0012 4.1E-08 56.5 1.9 82 9-100 1313-1394(2512)
139 1xdz_A Methyltransferase GIDB; 96.3 0.0039 1.3E-07 41.0 3.9 60 9-101 143-202 (240)
140 2qm3_A Predicted methyltransfe 96.3 0.025 8.7E-07 39.7 8.2 38 9-49 243-280 (373)
141 3mti_A RRNA methylase; SAM-dep 96.2 0.0054 1.9E-07 38.4 4.1 72 9-101 91-169 (185)
142 4dcm_A Ribosomal RNA large sub 96.2 0.0032 1.1E-07 44.6 3.3 45 2-46 285-334 (375)
143 1yb2_A Hypothetical protein TA 96.2 0.0016 5.4E-08 43.8 1.6 62 3-100 173-236 (275)
144 1ej0_A FTSJ; methyltransferase 96.1 0.0049 1.7E-07 37.7 3.4 40 9-48 90-138 (180)
145 3mb5_A SAM-dependent methyltra 96.1 0.0038 1.3E-07 41.2 2.8 62 3-100 156-221 (255)
146 2y1w_A Histone-arginine methyl 96.0 0.0018 6E-08 45.3 1.2 41 5-45 113-154 (348)
147 3duw_A OMT, O-methyltransferas 96.0 0.021 7.2E-07 36.8 6.3 37 9-50 135-171 (223)
148 3bzb_A Uncharacterized protein 95.9 0.0096 3.3E-07 40.2 4.3 35 9-45 165-204 (281)
149 2pwy_A TRNA (adenine-N(1)-)-me 95.8 0.0036 1.2E-07 41.2 1.8 56 9-100 168-223 (258)
150 3b3j_A Histone-arginine methyl 95.8 0.0023 7.9E-08 46.8 0.9 41 4-44 220-261 (480)
151 2hnk_A SAM-dependent O-methylt 95.7 0.018 6.1E-07 37.7 4.9 37 9-50 149-185 (239)
152 3p9n_A Possible methyltransfer 95.7 0.041 1.4E-06 34.5 6.4 41 9-50 115-157 (189)
153 2frn_A Hypothetical protein PH 95.6 0.054 1.9E-06 36.4 7.2 60 9-97 194-253 (278)
154 2uyo_A Hypothetical protein ML 95.6 0.018 6.1E-07 39.8 4.8 87 9-96 181-274 (310)
155 3r3h_A O-methyltransferase, SA 95.5 0.029 1E-06 37.0 5.3 38 9-51 138-175 (242)
156 3dmg_A Probable ribosomal RNA 95.4 0.0092 3.1E-07 42.3 2.8 38 9-46 300-340 (381)
157 3fpf_A Mtnas, putative unchara 95.3 0.018 6.1E-07 39.7 3.9 34 9-47 190-223 (298)
158 3g89_A Ribosomal RNA small sub 95.1 0.012 4E-07 39.2 2.4 70 9-111 153-227 (249)
159 3sso_A Methyltransferase; macr 95.1 0.0063 2.1E-07 43.8 1.2 38 9-49 290-327 (419)
160 1o54_A SAM-dependent O-methylt 95.1 0.0089 3E-07 40.1 1.8 31 9-46 183-213 (277)
161 2zwa_A Leucine carboxyl methyl 95.1 0.21 7.2E-06 37.9 9.5 88 9-100 219-308 (695)
162 3frh_A 16S rRNA methylase; met 95.0 0.058 2E-06 36.3 5.6 42 4-46 164-206 (253)
163 3njr_A Precorrin-6Y methylase; 94.9 0.039 1.3E-06 35.4 4.5 57 7-99 122-178 (204)
164 1ixk_A Methyltransferase; open 94.8 0.024 8.2E-07 39.0 3.5 25 26-50 226-250 (315)
165 3u81_A Catechol O-methyltransf 94.8 0.016 5.6E-07 37.4 2.4 38 9-49 136-173 (221)
166 3tfw_A Putative O-methyltransf 94.8 0.046 1.6E-06 36.1 4.6 37 9-50 138-174 (248)
167 3tr6_A O-methyltransferase; ce 94.4 0.048 1.7E-06 35.0 4.1 37 9-50 142-178 (225)
168 3lbf_A Protein-L-isoaspartate 94.4 0.016 5.3E-07 37.0 1.7 32 9-48 145-176 (210)
169 2yxe_A Protein-L-isoaspartate 94.4 0.017 5.7E-07 37.0 1.8 31 9-47 148-178 (215)
170 3kr9_A SAM-dependent methyltra 94.3 0.47 1.6E-05 31.3 8.7 74 3-111 77-156 (225)
171 1vbf_A 231AA long hypothetical 94.3 0.019 6.4E-07 37.2 1.9 31 9-47 136-166 (231)
172 2nyu_A Putative ribosomal RNA 94.3 0.015 5.2E-07 36.5 1.4 39 9-47 99-146 (196)
173 2yxd_A Probable cobalt-precorr 94.0 0.13 4.3E-06 31.5 5.3 54 8-98 101-154 (183)
174 2plw_A Ribosomal RNA methyltra 93.8 0.06 2E-06 33.9 3.5 38 9-46 108-154 (201)
175 3q7e_A Protein arginine N-meth 93.8 0.026 8.8E-07 39.4 1.8 36 9-44 135-171 (349)
176 3r0q_C Probable protein argini 93.5 0.024 8E-07 40.0 1.2 41 8-48 130-171 (376)
177 2ozv_A Hypothetical protein AT 93.4 0.034 1.2E-06 37.1 1.9 22 25-46 149-170 (260)
178 2p41_A Type II methyltransfera 93.4 0.12 4.1E-06 35.5 4.6 37 8-44 149-189 (305)
179 2gpy_A O-methyltransferase; st 93.3 0.025 8.5E-07 36.8 1.1 36 9-49 128-163 (233)
180 1p91_A Ribosomal RNA large sub 93.2 0.058 2E-06 35.7 2.8 32 9-49 150-181 (269)
181 2avd_A Catechol-O-methyltransf 93.1 0.11 3.8E-06 33.4 4.0 37 9-50 147-183 (229)
182 2bm8_A Cephalosporin hydroxyla 93.1 0.088 3E-06 34.6 3.5 34 9-47 154-188 (236)
183 1jg1_A PIMT;, protein-L-isoasp 93.0 0.04 1.4E-06 35.9 1.8 31 9-47 160-190 (235)
184 1yzh_A TRNA (guanine-N(7)-)-me 92.9 0.17 5.7E-06 32.3 4.6 37 9-46 113-156 (214)
185 3dr5_A Putative O-methyltransf 92.9 0.066 2.3E-06 34.9 2.7 36 9-49 131-166 (221)
186 1ws6_A Methyltransferase; stru 92.7 0.091 3.1E-06 31.9 3.0 38 8-49 111-150 (171)
187 1g6q_1 HnRNP arginine N-methyl 92.6 0.049 1.7E-06 37.6 1.8 36 9-44 107-143 (328)
188 3dxy_A TRNA (guanine-N(7)-)-me 92.6 0.049 1.7E-06 35.4 1.7 37 9-46 107-150 (218)
189 2fca_A TRNA (guanine-N(7)-)-me 92.5 0.15 5.1E-06 32.8 3.9 21 26-46 133-153 (213)
190 2fyt_A Protein arginine N-meth 92.5 0.083 2.8E-06 36.7 2.8 35 9-43 133-168 (340)
191 1dl5_A Protein-L-isoaspartate 92.5 0.055 1.9E-06 37.1 1.9 31 9-47 146-176 (317)
192 1jsx_A Glucose-inhibited divis 92.4 0.056 1.9E-06 34.2 1.8 31 9-45 134-164 (207)
193 3c3p_A Methyltransferase; NP_9 92.3 0.05 1.7E-06 34.7 1.4 38 8-50 127-164 (210)
194 2yvl_A TRMI protein, hypotheti 92.1 0.099 3.4E-06 33.9 2.7 32 9-47 160-191 (248)
195 1r18_A Protein-L-isoaspartate( 91.8 0.073 2.5E-06 34.4 1.8 30 9-46 165-194 (227)
196 2i7c_A Spermidine synthase; tr 91.7 0.072 2.5E-06 36.0 1.8 37 9-45 153-191 (283)
197 1sui_A Caffeoyl-COA O-methyltr 91.4 0.16 5.3E-06 33.6 3.1 36 9-49 158-193 (247)
198 2ift_A Putative methylase HI07 91.3 0.093 3.2E-06 33.4 1.9 39 8-49 126-166 (201)
199 3ajd_A Putative methyltransfer 91.0 0.18 6.2E-06 33.7 3.1 26 26-51 191-216 (274)
200 1mjf_A Spermidine synthase; sp 90.9 0.1 3.4E-06 35.3 1.8 38 9-46 154-193 (281)
201 3lec_A NADB-rossmann superfami 90.9 2.4 8.1E-05 28.0 9.0 69 8-111 91-162 (230)
202 2fhp_A Methylase, putative; al 90.8 0.24 8.1E-06 30.5 3.4 38 9-49 118-157 (187)
203 2yxl_A PH0851 protein, 450AA l 90.8 0.15 5E-06 36.8 2.7 42 9-50 332-393 (450)
204 3ckk_A TRNA (guanine-N(7)-)-me 90.5 0.15 5.2E-06 33.5 2.4 21 26-46 148-168 (235)
205 3cbg_A O-methyltransferase; cy 90.5 0.1 3.5E-06 34.0 1.6 37 9-50 150-186 (232)
206 2xyq_A Putative 2'-O-methyl tr 90.5 0.17 5.8E-06 34.6 2.7 22 25-46 150-171 (290)
207 2frx_A Hypothetical protein YE 90.1 0.28 9.6E-06 35.8 3.7 25 26-50 226-250 (479)
208 3m6w_A RRNA methylase; rRNA me 90.0 0.17 5.7E-06 36.9 2.4 25 26-50 209-233 (464)
209 3adn_A Spermidine synthase; am 90.0 0.14 4.8E-06 34.9 1.9 38 9-46 159-198 (294)
210 2oxt_A Nucleoside-2'-O-methylt 89.9 0.32 1.1E-05 32.6 3.6 39 8-47 141-186 (265)
211 2pbf_A Protein-L-isoaspartate 89.9 0.15 5.1E-06 32.8 1.9 31 9-47 164-194 (227)
212 2b2c_A Spermidine synthase; be 89.8 0.12 4E-06 35.7 1.4 37 9-46 183-222 (314)
213 3ntv_A MW1564 protein; rossman 89.8 0.083 2.8E-06 34.4 0.6 36 9-49 144-179 (232)
214 1uir_A Polyamine aminopropyltr 89.8 0.14 4.8E-06 35.1 1.8 38 9-46 153-195 (314)
215 1i9g_A Hypothetical protein RV 89.7 0.095 3.2E-06 34.8 0.9 32 9-47 173-204 (280)
216 2esr_A Methyltransferase; stru 89.6 0.13 4.3E-06 31.7 1.4 39 9-50 102-142 (177)
217 2f8l_A Hypothetical protein LM 89.6 0.29 1E-05 33.8 3.4 39 9-47 203-257 (344)
218 3c3y_A Pfomt, O-methyltransfer 89.6 0.15 5.2E-06 33.3 1.8 36 9-49 149-184 (237)
219 3gjy_A Spermidine synthase; AP 89.5 0.16 5.4E-06 35.3 1.9 39 9-47 161-201 (317)
220 2qy6_A UPF0209 protein YFCK; s 89.5 0.18 6.3E-06 33.8 2.2 29 82-110 216-244 (257)
221 1i1n_A Protein-L-isoaspartate 89.0 0.18 6.3E-06 32.3 1.9 31 9-47 153-183 (226)
222 1sqg_A SUN protein, FMU protei 88.2 0.33 1.1E-05 34.7 2.9 25 26-50 354-378 (429)
223 2wa2_A Non-structural protein 87.9 0.44 1.5E-05 32.2 3.2 38 8-46 149-193 (276)
224 2o07_A Spermidine synthase; st 87.3 0.21 7.3E-06 34.1 1.4 38 9-46 170-209 (304)
225 2b25_A Hypothetical protein; s 87.0 0.23 8E-06 34.0 1.5 32 9-47 189-220 (336)
226 2pt6_A Spermidine synthase; tr 86.9 0.25 8.4E-06 34.1 1.5 36 9-45 191-229 (321)
227 2vdv_E TRNA (guanine-N(7)-)-me 86.8 0.15 5.2E-06 33.4 0.4 20 26-45 153-172 (246)
228 2fpo_A Methylase YHHF; structu 86.4 0.39 1.3E-05 30.5 2.2 38 9-49 124-163 (202)
229 1xj5_A Spermidine synthase 1; 86.3 0.24 8.4E-06 34.4 1.3 36 9-45 196-234 (334)
230 1iy9_A Spermidine synthase; ro 85.8 0.17 5.9E-06 34.0 0.3 37 9-45 150-188 (275)
231 3dou_A Ribosomal RNA large sub 85.5 0.4 1.4E-05 30.3 1.9 23 25-47 118-140 (191)
232 3gnl_A Uncharacterized protein 84.8 6.7 0.00023 26.0 7.7 69 8-111 91-162 (244)
233 2km1_A Protein DRE2; yeast, an 84.6 0.54 1.8E-05 28.7 2.0 19 26-44 78-96 (136)
234 3k6r_A Putative transferase PH 84.1 1.1 3.9E-05 30.3 3.7 60 8-96 193-252 (278)
235 3gdh_A Trimethylguanosine synt 83.5 0.02 7E-07 37.3 -5.0 77 9-104 146-222 (241)
236 2cmg_A Spermidine synthase; tr 83.0 0.44 1.5E-05 31.9 1.3 30 9-45 141-170 (262)
237 1inl_A Spermidine synthase; be 82.7 0.46 1.6E-05 32.3 1.3 37 9-45 165-204 (296)
238 3tka_A Ribosomal RNA small sub 81.3 0.59 2E-05 32.9 1.5 30 23-52 251-280 (347)
239 1wg8_A Predicted S-adenosylmet 80.9 0.67 2.3E-05 31.7 1.6 30 23-52 210-239 (285)
240 3a27_A TYW2, uncharacterized p 80.4 0.44 1.5E-05 31.9 0.6 37 9-51 188-224 (272)
241 3tma_A Methyltransferase; thum 80.1 2.2 7.7E-05 29.4 4.1 38 9-46 274-317 (354)
242 2cz4_A Hypothetical protein TT 77.9 4.1 0.00014 24.0 4.3 27 21-47 82-110 (119)
243 1nv8_A HEMK protein; class I a 77.4 3.3 0.00011 27.8 4.2 18 27-44 229-247 (284)
244 2as0_A Hypothetical protein PH 77.2 1.7 6E-05 30.5 2.9 26 23-48 312-337 (396)
245 4azs_A Methyltransferase WBDD; 76.7 0.47 1.6E-05 35.2 -0.2 44 9-52 136-179 (569)
246 1wxx_A TT1595, hypothetical pr 76.1 2.1 7E-05 30.0 3.0 25 23-47 302-326 (382)
247 1m6y_A S-adenosyl-methyltransf 75.6 1 3.6E-05 30.8 1.3 27 23-49 222-248 (301)
248 2igt_A SAM dependent methyltra 75.5 3.3 0.00011 28.6 3.9 25 24-48 250-274 (332)
249 1ne2_A Hypothetical protein TA 73.6 1.9 6.4E-05 26.9 2.1 38 5-45 107-145 (200)
250 2ih2_A Modification methylase 72.9 3.6 0.00012 28.8 3.6 21 27-47 145-165 (421)
251 1ssz_A Pulmonary surfactant-as 72.6 2 6.7E-05 19.0 1.4 18 25-42 4-21 (34)
252 3evf_A RNA-directed RNA polyme 72.1 3.7 0.00013 27.9 3.4 37 8-44 141-182 (277)
253 1wy7_A Hypothetical protein PH 72.0 9.4 0.00032 23.6 5.2 29 8-36 113-141 (207)
254 4hc4_A Protein arginine N-meth 69.2 2 6.8E-05 30.4 1.6 40 5-44 146-187 (376)
255 2hiy_A Hypothetical protein; C 66.9 10 0.00034 24.0 4.4 34 75-109 17-51 (183)
256 3dmg_A Probable ribosomal RNA 65.9 5.8 0.0002 27.9 3.4 34 9-47 103-140 (381)
257 3m4x_A NOL1/NOP2/SUN family pr 65.7 1.7 5.9E-05 31.5 0.7 25 26-50 214-238 (456)
258 1zq9_A Probable dimethyladenos 65.6 2 6.8E-05 28.9 1.0 38 5-43 91-144 (285)
259 4fzv_A Putative methyltransfer 65.0 2.8 9.6E-05 29.5 1.7 28 26-53 264-291 (359)
260 3fpn_B Geobacillus stearotherm 63.2 3 0.0001 24.0 1.3 29 75-103 19-47 (106)
261 1whz_A Hypothetical protein; a 62.8 6.5 0.00022 20.5 2.5 19 79-97 5-23 (70)
262 2zig_A TTHA0409, putative modi 61.8 3.3 0.00011 27.9 1.5 20 26-45 77-96 (297)
263 3c0k_A UPF0064 protein YCCW; P 60.5 5.9 0.0002 27.8 2.7 23 24-46 317-339 (396)
264 2okc_A Type I restriction enzy 60.1 2.7 9.1E-05 30.1 0.8 22 26-47 287-308 (445)
265 4dcm_A Ribosomal RNA large sub 59.5 26 0.00088 24.5 5.8 42 4-48 96-138 (375)
266 4dmg_A Putative uncharacterize 57.9 5.2 0.00018 28.3 2.0 24 25-48 305-328 (393)
267 3fpn_A Geobacillus stearotherm 57.1 27 0.00092 20.5 6.2 47 26-98 7-53 (119)
268 4dfc_B Uvrabc system protein A 56.2 29 0.00099 20.5 4.9 47 26-98 9-55 (126)
269 2dwf_A Pulmonary surfactant-as 55.5 6.2 0.00021 17.7 1.3 18 25-42 4-21 (34)
270 1cee_B Wiskott-aldrich syndrom 54.3 4.3 0.00015 20.8 0.8 20 80-99 34-53 (59)
271 2rbg_A Putative uncharacterize 51.4 10 0.00035 22.4 2.2 33 13-46 63-95 (126)
272 3o4f_A Spermidine synthase; am 51.0 4.2 0.00014 27.9 0.6 21 26-46 178-198 (294)
273 3lap_A Arginine repressor; arg 50.5 8 0.00027 24.3 1.8 23 75-97 31-53 (170)
274 3tm4_A TRNA (guanine N2-)-meth 50.4 26 0.00089 24.3 4.6 21 81-101 332-352 (373)
275 2b78_A Hypothetical protein SM 49.6 5.7 0.00019 27.9 1.1 38 9-46 287-331 (385)
276 1boo_A Protein (N-4 cytosine-s 49.4 6.9 0.00024 26.8 1.5 21 25-45 63-83 (323)
277 3ouv_A Serine/threonine protei 48.9 23 0.00077 18.2 3.3 20 79-98 16-35 (71)
278 2lnh_A N-WAsp, neural wiskott- 48.8 5 0.00017 21.1 0.5 17 81-97 24-40 (65)
279 2wbr_A GW182, gawky, LD47780P; 46.2 37 0.0013 18.8 4.0 31 79-110 19-50 (89)
280 3ijw_A Aminoglycoside N3-acety 44.4 25 0.00086 23.7 3.6 41 7-47 31-73 (268)
281 1x4c_A Splicing factor, argini 44.0 40 0.0014 18.6 5.0 32 78-110 26-57 (108)
282 1lfp_A Hypothetical protein AQ 43.1 43 0.0015 22.4 4.5 34 19-52 60-106 (249)
283 2yx1_A Hypothetical protein MJ 42.9 7.3 0.00025 26.7 0.8 36 9-50 260-295 (336)
284 3v4g_A Arginine repressor; vib 42.0 12 0.00042 23.7 1.6 21 75-95 44-64 (180)
285 3aaf_A Werner syndrome ATP-dep 41.6 13 0.00044 22.2 1.6 70 19-96 13-85 (134)
286 3t9z_A GLNK3, nitrogen regulat 41.4 29 0.00098 20.2 3.1 28 20-47 65-96 (118)
287 3ncq_A Nitrogen regulatory pro 41.2 29 0.00098 20.3 3.1 28 20-47 65-96 (119)
288 3beg_B Splicing factor, argini 41.1 42 0.0014 18.8 3.8 31 79-110 28-58 (115)
289 2nyg_A YOKD protein; PFAM02522 41.0 30 0.001 23.4 3.5 39 7-45 29-69 (273)
290 1vfj_A Nitrogen regulatory pro 40.5 31 0.0011 19.8 3.2 27 20-46 65-95 (116)
291 3v97_A Ribosomal RNA large sub 40.3 11 0.00038 28.8 1.5 23 24-46 635-657 (703)
292 1jdq_A TM006 protein, hypothet 40.3 48 0.0017 18.5 8.5 27 81-107 66-93 (98)
293 3c6k_A Spermine synthase; sper 39.7 8.5 0.00029 27.4 0.7 20 26-45 311-330 (381)
294 1f3m_A Serine/threonine-protei 39.5 18 0.00061 19.7 1.9 19 80-98 30-48 (80)
295 3dfe_A Putative PII-like signa 39.3 33 0.0011 19.8 3.1 27 21-47 69-97 (111)
296 3l7p_A Putative nitrogen regul 39.3 33 0.0011 19.8 3.2 27 20-46 68-98 (115)
297 3vyw_A MNMC2; tRNA wobble urid 39.1 39 0.0013 23.2 4.0 30 81-110 228-257 (308)
298 1g60_A Adenine-specific methyl 39.1 13 0.00044 24.5 1.5 21 25-45 53-73 (260)
299 3sma_A FRBF; N-acetyl transfer 38.6 37 0.0012 23.2 3.7 42 7-48 38-81 (286)
300 3mhy_A PII-like protein PZ; PI 38.4 28 0.00096 19.9 2.8 27 21-47 66-96 (112)
301 1wwu_A Hypothetical protein FL 38.3 19 0.00065 20.6 1.9 20 79-98 24-43 (99)
302 1ej5_A WAsp, wiskott-aldrich s 38.0 19 0.00066 20.8 2.0 17 81-97 23-39 (107)
303 2ns1_B Nitrogen regulatory pro 37.6 28 0.00095 20.0 2.7 27 21-47 70-100 (116)
304 1pc6_A Protein NINB; structura 37.4 69 0.0023 19.4 6.0 25 75-100 63-87 (146)
305 4aff_A Nitrogen regulatory pro 37.2 30 0.001 20.0 2.8 28 20-47 65-96 (116)
306 3qoe_A Heterocyst differentiat 36.8 6.1 0.00021 26.2 -0.4 29 14-42 67-95 (302)
307 2c71_A Glycoside hydrolase, fa 36.4 30 0.001 22.1 2.9 30 18-47 127-157 (216)
308 1mhm_B Adometdc, samdc, S-aden 36.1 51 0.0018 17.6 3.9 25 77-101 38-62 (72)
309 2lmc_A Bacterial RNA polymeras 35.9 48 0.0016 18.0 3.1 23 79-101 54-80 (84)
310 3twe_A Alpha4H; unknown functi 35.7 16 0.00056 15.1 1.0 16 24-39 12-27 (27)
311 1hwu_A PII protein; herbaspiri 35.2 41 0.0014 19.0 3.1 26 21-46 66-95 (112)
312 2eg2_A Nitrogen regulatory pro 35.2 41 0.0014 19.1 3.1 27 21-47 66-96 (112)
313 2jvr_A Nucleolar protein 3; RN 34.9 61 0.0021 18.3 3.9 32 79-110 40-74 (111)
314 1yg0_A COP associated protein; 34.0 26 0.00089 16.6 1.9 16 80-95 50-65 (66)
315 3ce8_A Putative PII-like nitro 33.5 49 0.0017 19.4 3.3 25 21-45 86-111 (120)
316 2fi0_A Conserved domain protei 33.1 31 0.001 18.5 2.2 18 79-96 61-78 (81)
317 1eg2_A Modification methylase 32.6 18 0.00063 24.7 1.5 22 24-45 84-105 (319)
318 3a1y_A 50S ribosomal protein P 32.5 43 0.0015 16.9 2.6 22 75-96 13-34 (58)
319 2yjg_A Lactate racemase apopro 38.4 9.6 0.00033 27.5 0.0 46 7-52 276-323 (436)
320 1b4a_A Arginine repressor; hel 32.0 24 0.00082 21.5 1.8 20 77-96 18-37 (149)
321 2cw5_A Bacterial fluorinating 31.5 1.1E+02 0.0037 20.5 5.0 48 5-52 28-76 (255)
322 2zbv_A Uncharacterized conserv 31.4 96 0.0033 20.8 4.8 47 6-52 27-74 (263)
323 2e8m_A Epidermal growth factor 31.2 16 0.00056 20.8 0.9 19 79-97 34-52 (99)
324 3q7r_A Transcriptional regulat 31.2 59 0.002 18.8 3.2 24 5-31 70-94 (121)
325 2gw8_A PII signal transduction 30.6 41 0.0014 19.1 2.6 27 21-47 68-98 (114)
326 1x8d_A Hypothetical protein YI 30.2 78 0.0027 17.9 3.9 30 81-110 26-58 (104)
327 4e8u_A Putative uncharacterize 29.9 62 0.0021 20.3 3.4 32 80-111 34-70 (172)
328 2wr8_A Putative uncharacterize 29.9 1.1E+02 0.0037 20.5 4.9 47 6-52 30-77 (259)
329 3ggo_A Prephenate dehydrogenas 29.8 81 0.0028 21.3 4.4 32 7-43 94-125 (314)
330 1cc8_A Protein (metallochapero 29.7 57 0.0019 16.1 3.4 20 79-98 51-70 (73)
331 3eld_A Methyltransferase; flav 29.5 89 0.0031 21.5 4.4 37 8-45 148-190 (300)
332 1je3_A EC005, hypothetical 8.6 29.5 54 0.0018 18.3 2.9 25 82-106 68-92 (97)
333 2qfm_A Spermine synthase; sper 28.7 19 0.00063 25.5 1.0 21 26-46 290-314 (364)
334 4i8i_A Hypothetical protein; 5 28.7 1.3E+02 0.0045 20.0 5.7 44 9-52 95-143 (271)
335 1kon_A Protein YEBC, YEBC; alp 28.6 34 0.0012 22.9 2.2 16 37-52 94-109 (249)
336 2ar0_A M.ecoki, type I restric 28.5 17 0.00059 26.8 0.8 21 26-46 292-312 (541)
337 3hz7_A Uncharacterized protein 28.5 60 0.0021 17.6 2.9 23 81-103 42-64 (87)
338 3bzq_A Nitrogen regulatory pro 28.1 40 0.0014 19.2 2.3 27 21-47 68-98 (114)
339 2o66_A PII protein; regulation 27.5 49 0.0017 19.7 2.6 27 21-47 79-109 (135)
340 2g5c_A Prephenate dehydrogenas 27.2 1.1E+02 0.0037 19.8 4.6 33 7-44 62-94 (281)
341 1j26_A Immature colon carcinom 27.1 63 0.0022 18.7 2.9 36 10-45 43-81 (112)
342 3lvj_C Sulfurtransferase TUSA; 27.0 78 0.0027 16.8 7.2 53 25-106 23-75 (82)
343 3hjh_A Transcription-repair-co 26.8 26 0.00087 25.6 1.5 31 75-105 132-162 (483)
344 2j9c_A GLNK1, hypothetical nit 26.7 43 0.0015 19.3 2.2 27 21-47 68-98 (119)
345 3iwl_A Copper transport protei 26.7 64 0.0022 15.8 3.0 19 79-97 46-64 (68)
346 1mw7_A Hypothetical protein HP 26.5 34 0.0012 22.7 1.9 16 77-92 102-117 (240)
347 4e5v_A Putative THUA-like prot 26.5 1.5E+02 0.005 19.8 5.5 39 8-50 59-97 (281)
348 2dnp_A RNA-binding protein 14; 26.3 76 0.0026 16.5 4.4 30 79-110 21-50 (90)
349 3lkd_A Type I restriction-modi 26.2 50 0.0017 24.5 2.9 20 27-46 338-358 (542)
350 2h80_A STAR-related lipid tran 25.9 46 0.0016 18.0 2.0 16 80-95 20-35 (81)
351 2d8c_A Phosphatidylcholine:cer 25.7 28 0.00097 19.5 1.2 19 77-95 18-36 (97)
352 2wh0_Q Pkcev3, protein kinase 25.7 49 0.0017 14.0 2.0 17 22-38 12-28 (31)
353 2cq1_A PTB-like protein L; RRM 25.5 91 0.0031 17.1 3.7 31 79-110 27-58 (101)
354 3m05_A Uncharacterized protein 25.5 92 0.0032 18.1 3.5 24 80-103 17-40 (114)
355 3rht_A (gatase1)-like protein; 25.3 1.1E+02 0.0037 20.3 4.2 34 9-46 52-86 (259)
356 1y60_A Formaldehyde-activating 25.1 31 0.0011 21.6 1.4 27 9-35 110-136 (169)
357 3n1g_B Desert hedgehog protein 25.1 1.3E+02 0.0045 18.8 5.5 85 9-100 65-158 (170)
358 4dvj_A Putative zinc-dependent 25.1 48 0.0017 22.7 2.6 20 27-46 251-270 (363)
359 3ua3_A Protein arginine N-meth 25.0 70 0.0024 24.9 3.5 37 7-43 495-531 (745)
360 1thf_D HISF protein; thermophI 24.5 39 0.0013 21.7 1.9 21 75-96 201-221 (253)
361 3gge_A PDZ domain-containing p 24.3 76 0.0026 17.7 2.9 25 8-32 50-76 (95)
362 1sjq_A Polypyrimidine tract-bi 24.1 1E+02 0.0036 17.3 4.8 31 79-110 28-59 (105)
363 3iek_A Ribonuclease TTHA0252; 24.1 1.1E+02 0.0038 21.6 4.3 41 8-48 180-224 (431)
364 2qif_A Copper chaperone COPZ; 24.0 46 0.0016 15.5 1.8 16 80-95 52-67 (69)
365 1pqw_A Polyketide synthase; ro 23.9 18 0.00063 22.2 0.2 22 27-48 118-139 (198)
366 3s1s_A Restriction endonucleas 23.7 69 0.0023 25.5 3.3 22 26-47 445-466 (878)
367 2jig_A Prolyl-4 hydroxylase; h 23.6 72 0.0025 20.3 3.1 28 9-39 21-48 (224)
368 4gqb_A Protein arginine N-meth 23.4 33 0.0011 26.1 1.5 38 5-42 425-463 (637)
369 3khk_A Type I restriction-modi 23.4 24 0.00083 26.1 0.8 20 27-46 376-395 (544)
370 4fak_A Ribosomal RNA large sub 23.3 1.4E+02 0.0047 18.4 6.5 65 25-90 20-98 (163)
371 4a2a_A Cell division protein F 23.0 1.1E+02 0.0038 21.6 4.2 81 18-100 104-189 (419)
372 2roe_A Heavy metal binding pro 23.0 55 0.0019 15.6 2.0 18 79-96 46-63 (66)
373 3eti_A X (ADRP) domain, macro 23.0 71 0.0024 19.8 2.8 34 4-37 70-114 (168)
374 2jvo_A Nucleolar protein 3; nu 22.9 1E+02 0.0036 16.9 3.7 30 79-110 43-72 (108)
375 4fpp_A Phosphotransferase; fou 22.6 61 0.0021 20.7 2.6 22 25-46 151-172 (247)
376 1cpz_A Protein (COPZ); copper 22.6 67 0.0023 15.0 2.3 17 80-96 50-66 (68)
377 2ad9_A Polypyrimidine tract-bi 22.5 1E+02 0.0036 17.7 3.4 31 79-110 43-74 (119)
378 2f3n_A SH3 and multiple ankyri 22.5 59 0.002 17.0 2.1 16 79-94 5-20 (76)
379 2dgt_A RNA-binding protein 30; 22.5 94 0.0032 16.2 4.6 30 79-110 22-51 (92)
380 4h62_V Mediator of RNA polymer 22.3 59 0.002 13.8 2.2 18 18-35 7-24 (31)
381 3fxd_A Protein ICMQ; helix bun 22.3 31 0.0011 17.5 0.8 21 19-39 4-24 (57)
382 3t7v_A Methylornithine synthas 22.2 41 0.0014 22.9 1.8 21 78-98 321-341 (350)
383 2pln_A HP1043, response regula 22.2 1E+02 0.0034 17.0 3.3 29 9-46 64-93 (137)
384 1pl8_A Human sorbitol dehydrog 22.0 60 0.0021 22.0 2.6 21 27-47 254-274 (356)
385 3r27_A HnRNP L, heterogeneous 21.9 1.1E+02 0.0039 17.0 5.0 31 79-110 33-64 (100)
386 4a4j_A Pacszia, cation-transpo 21.9 63 0.0021 15.6 2.1 18 79-96 50-67 (69)
387 3itq_A Prolyl 4-hydroxylase, a 21.9 74 0.0025 20.5 2.8 21 20-40 48-68 (216)
388 3m6i_A L-arabinitol 4-dehydrog 21.6 62 0.0021 22.0 2.6 21 27-47 264-284 (363)
389 1wex_A Hypothetical protein (r 21.3 1.2E+02 0.0039 16.8 4.7 31 79-110 27-58 (104)
390 3k96_A Glycerol-3-phosphate de 21.3 1.8E+02 0.0061 20.0 4.9 33 8-45 100-132 (356)
391 3ny7_A YCHM protein, sulfate t 21.1 1.2E+02 0.0041 16.9 3.7 36 10-46 49-84 (118)
392 3cvo_A Methyltransferase-like 21.0 59 0.002 20.8 2.2 35 9-51 124-158 (202)
393 2xmm_A SSR2857 protein, ATX1; 21.0 76 0.0026 14.6 2.3 16 80-95 48-63 (64)
394 4f3q_A Transcriptional regulat 20.9 21 0.00073 23.8 0.1 20 79-98 149-168 (247)
395 2dgu_A Heterogeneous nuclear r 20.9 1.1E+02 0.0038 16.4 4.4 30 79-110 23-52 (103)
396 1cqm_A Ribosomal protein S6; a 20.6 91 0.0031 17.4 2.7 28 20-47 14-42 (101)
397 3gcz_A Polyprotein; flavivirus 20.6 28 0.00097 23.7 0.6 38 8-45 157-200 (282)
398 2cpd_A Apobec-1 stimulating pr 20.5 1.1E+02 0.0037 16.2 5.1 31 79-110 27-58 (99)
399 2lbf_A 60S acidic ribosomal pr 20.3 72 0.0025 16.7 2.1 22 75-96 19-40 (69)
400 2jso_A Polymyxin resistance pr 20.3 73 0.0025 17.5 2.1 18 75-92 68-85 (88)
401 2kuf_A PKNB, serine/threonine- 20.1 96 0.0033 18.0 2.9 24 75-98 78-101 (139)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.96 E-value=1.1e-29 Score=179.16 Aligned_cols=108 Identities=23% Similarity=0.434 Sum_probs=96.5
Q ss_pred CCC-CCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceec
Q 038113 1 MFQ-NVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKER 79 (112)
Q Consensus 1 ~f~-~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 79 (112)
||+ +.|++|+|+++++||+|+|+++.+||++|+++|+|||+++|+|.+.+++...+. ....+|+.|+..+ +|++|
T Consensus 237 ~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~g~er 312 (353)
T 4a6d_A 237 FFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-EGQER 312 (353)
T ss_dssp TTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-SCCCC
T ss_pred cccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-CCcCC
Confidence 674 456679999999999999999999999999999999999999999987765442 2456889998865 99999
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 80 TKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|.+||++||++|||+.+++.++++..++|+++|
T Consensus 313 t~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 313 TPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred CHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 999999999999999999999999999999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.94 E-value=4.1e-26 Score=161.56 Aligned_cols=112 Identities=46% Similarity=0.939 Sum_probs=97.6
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
||+++|++|+|+++++||+|+|+++.++|++++++|+|||+++|+|.+.++.+..+........+++.|+....+|+.||
T Consensus 253 ~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt 332 (364)
T 3p9c_A 253 MFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERY 332 (364)
T ss_dssp TTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCB
T ss_pred cCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCC
Confidence 56788878999999999999999999999999999999999999999988765433222234567888875445899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 81 KHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.+||+++|++|||+.+++.++.+..++||++|
T Consensus 333 ~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 333 EREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 99999999999999999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.93 E-value=2.7e-25 Score=157.54 Aligned_cols=112 Identities=52% Similarity=0.983 Sum_probs=97.7
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
||+++|++|+|+++++||+|+|+++.++|++++++|+|||+++|+|.+.++.+..+........+++.|+....+|+.||
T Consensus 255 ~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt 334 (368)
T 3reo_A 255 MFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERT 334 (368)
T ss_dssp TTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCC
T ss_pred CCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCC
Confidence 56888878999999999999999999999999999999999999999988765443223334567888876545899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 81 KHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.+||+++|++|||+.+++.+..+..++||++|
T Consensus 335 ~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 335 EKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 99999999999999999999999999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.89 E-value=1.5e-22 Score=142.31 Aligned_cols=107 Identities=25% Similarity=0.472 Sum_probs=92.8
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
||+++|..|+|+++++||+|+|+++.++|++++++|+|||+++|.|.+.++..... ....+++.|+.. .+|+.||
T Consensus 241 ~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~-~~~~~~t 315 (348)
T 3lst_A 241 FLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLAA-RTGQERT 315 (348)
T ss_dssp TTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC----HHHHHHHHHHHT-TSCCCCB
T ss_pred CCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc----hhhhcChhhhhc-CCCcCCC
Confidence 35788855999999999999999999999999999999999999999887664322 234577777765 4899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 81 KHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.++|.++|+++||+.+++.+..+..++||++|
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 99999999999999999999888899999986
No 5
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.88 E-value=2.3e-22 Score=141.71 Aligned_cols=111 Identities=35% Similarity=0.636 Sum_probs=94.4
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCC---CCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCce
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPK---DGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGK 77 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 77 (112)
||+++|.+|+|+++++||+|+|+++.++|++++++|+| ||+++|+|.+.++....+........+++.|+.. .+|+
T Consensus 245 ~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~g~ 323 (358)
T 1zg3_A 245 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM-FLGK 323 (358)
T ss_dssp TTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHH-HSCC
T ss_pred cCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhcc-CCCC
Confidence 46777878999999999999999999999999999999 9999999999876654321112345677777764 4889
Q ss_pred ecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 78 ERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.||.++|.++|+++||+.+++.+.++..++||++|
T Consensus 324 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 324 ERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp CEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999999999999888899999987
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.88 E-value=2.4e-22 Score=142.34 Aligned_cols=106 Identities=20% Similarity=0.470 Sum_probs=92.4
Q ss_pred CCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceec
Q 038113 1 MFQNVAK-GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKER 79 (112)
Q Consensus 1 ~f~~~P~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 79 (112)
||+++|. .|+|+++++||+|+|+++.++|++++++|+|||+++|+|.+.++..... ...+++.|+.. .+|+.|
T Consensus 261 ~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~-~~g~~~ 334 (369)
T 3gwz_A 261 FFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-----TLFVDLLLLVL-VGGAER 334 (369)
T ss_dssp TTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-----HHHHHHHHHHH-HSCCCB
T ss_pred CCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-----hhHhhHHHHhh-cCCccC
Confidence 4578885 5999999999999999999999999999999999999999988764321 34577777765 489999
Q ss_pred CHHHHHHHHHhcCCCeeEEEE-eCCceEEEEEEC
Q 038113 80 TKHELMTLVTGAGFGGIRFES-FICNLWVMEFYK 112 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~~ 112 (112)
|.++|+++|+++||+.+++.+ ..+..++||++|
T Consensus 335 t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 335 SESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp CHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 999999999999999999999 578899999986
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.88 E-value=2.4e-22 Score=140.27 Aligned_cols=103 Identities=23% Similarity=0.412 Sum_probs=88.7
Q ss_pred CCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceec
Q 038113 1 MFQNVAK-GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKER 79 (112)
Q Consensus 1 ~f~~~P~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 79 (112)
||+++|. .|+|+++++||+|+|+++.++|++++++|+|||+++|.|.+.++. .+ ...+++.|+.. .+|+.|
T Consensus 228 ~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~-----~~~~d~~~~~~-~~~~~~ 299 (332)
T 3i53_A 228 FFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HA-----GTGMDLRMLTY-FGGKER 299 (332)
T ss_dssp TTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-----CHHHHHHHHHH-HSCCCC
T ss_pred CCCCCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Cc-----cHHHHHHHHhh-CCCCCC
Confidence 4578884 599999999999999999999999999999999999999988765 22 13567777665 489999
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 80 TKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|.++|.++|+++||+.+++.+.++ .++||++|
T Consensus 300 t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 300 SLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 999999999999999999999988 99999985
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.87 E-value=1.8e-21 Score=136.92 Aligned_cols=110 Identities=32% Similarity=0.624 Sum_probs=92.6
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCC---CCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCce
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPK---DGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGK 77 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 77 (112)
||+++|+.|+|+++++||+|+|+++.++|++++++|+| ||+++|.|.+.++....+........+++.|+. . +|+
T Consensus 240 ~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~ 317 (352)
T 1fp2_A 240 MFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGK 317 (352)
T ss_dssp TTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCC
T ss_pred ccCCCCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCC
Confidence 45777878999999999999999999999999999999 999999999987654332111233456777765 3 588
Q ss_pred ecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 78 ERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.||.++|.++|+++||+.+++.+.++..++||++|
T Consensus 318 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 318 ERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp CEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred CCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999999999999888899999987
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.87 E-value=1.5e-21 Score=136.08 Aligned_cols=107 Identities=21% Similarity=0.386 Sum_probs=91.4
Q ss_pred CCCCCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceec
Q 038113 1 MFQNVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKER 79 (112)
Q Consensus 1 ~f~~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 79 (112)
+++++|+. |+|++++++|+|+++++.++|++++++|+|||+++|.|.+.++.... . ....+++.|+... +|+.|
T Consensus 226 ~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~---~~~~~~~~~~~~~-~~~~~ 300 (334)
T 2ip2_A 226 MLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS-P---MSVLWDVHLFMAC-AGRHR 300 (334)
T ss_dssp TTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC-H---HHHHHHHHHHHHH-SCCCC
T ss_pred CCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc-c---hhHHhhhHhHhhC-CCcCC
Confidence 45677764 99999999999999999999999999999999999999988765332 1 2345677776543 78999
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 80 TKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|.++|.++|+++||+.+++.+.++..++||++|
T Consensus 301 t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 301 TTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp BHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred CHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 999999999999999999999988899999986
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.87 E-value=8.7e-22 Score=139.45 Aligned_cols=111 Identities=42% Similarity=0.725 Sum_probs=91.3
Q ss_pred CCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 1 MFQNVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 1 ~f~~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
||+++|.+|+|+++++||+|+|+++.++|++++++|+|||+++|.|.+.++....+...+....+++.|+.. .+|+.||
T Consensus 261 ~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~t 339 (372)
T 1fp1_D 261 MFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFIT-VGGRERT 339 (372)
T ss_dssp TTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHH-HSCCCEE
T ss_pred cccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhc-cCCccCC
Confidence 456777789999999999999999999999999999999999999999876643322121344567766653 3789999
Q ss_pred HHHHHHHHHhcCCCeeEEEEe-CCceEEEEEEC
Q 038113 81 KHELMTLVTGAGFGGIRFESF-ICNLWVMEFYK 112 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 112 (112)
.++|+++|+++||+.+++.+. .+..++||++|
T Consensus 340 ~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 340 EKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 999999999999999999985 44269999987
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.83 E-value=2e-20 Score=132.18 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=85.1
Q ss_pred CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hhhhhhhhchhhhhcCCCceecCH
Q 038113 4 NVAK-GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRT-LSKIISQGDVLMMTQNPGGKERTK 81 (112)
Q Consensus 4 ~~P~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~ 81 (112)
|+|+ .|+|+++++||+|+|+++.++|++++++|+|||+++|+|.+.++....+. ........++.++. ..+++.||.
T Consensus 244 ~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~ 322 (363)
T 3dp7_A 244 PFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA-NGNSKMFHS 322 (363)
T ss_dssp CCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSS-CSSCCSCCH
T ss_pred CCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhh-CCCCcccCH
Confidence 4674 49999999999999999999999999999999999999998876543221 10111223344443 346889999
Q ss_pred HHHHHHHHhcCCCeeEEEEeC-CceEEEEEEC
Q 038113 82 HELMTLVTGAGFGGIRFESFI-CNLWVMEFYK 112 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~~ 112 (112)
+||+++|++|||+.+++.+.. ...++|+++|
T Consensus 323 ~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 323 DDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp HHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 999999999999999998764 4599999875
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.81 E-value=1.2e-19 Score=127.27 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=86.2
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHH
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHE 83 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e 83 (112)
.|++ |+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++....+. ....+++.|+....+|+.||.++
T Consensus 245 ~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~t~~e 321 (352)
T 3mcz_A 245 EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA---LSADFSLHMMVNTNHGELHPTPW 321 (352)
T ss_dssp TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH---HHHHHHHHHHHHSTTCCCCCHHH
T ss_pred CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc---hHHHhhHHHHhhCCCCCcCCHHH
Confidence 4554 9999999999999999999999999999999999999999887654332 23567777776555799999999
Q ss_pred HHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 84 LMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 84 ~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|+++|+++||+.++.. .+..+++.++|
T Consensus 322 ~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 322 IAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred HHHHHHHCCCceeeec--cCceEEEEEec
Confidence 9999999999999842 46688888876
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.80 E-value=1.4e-19 Score=127.31 Aligned_cols=107 Identities=21% Similarity=0.387 Sum_probs=88.7
Q ss_pred CCCCCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee-cCCCCCCchhhhhhhhhchhhhhcCCCcee
Q 038113 1 MFQNVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETI-LPKLPETRTLSKIISQGDVLMMTQNPGGKE 78 (112)
Q Consensus 1 ~f~~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 78 (112)
+++++|.. |+|++++++|+|+++++.++|++++++|+|||+++|.|.+ .++..... ....+++.|+... +++.
T Consensus 242 ~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~ 316 (360)
T 1tw3_A 242 FFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNE----QFTELDLRMLVFL-GGAL 316 (360)
T ss_dssp TTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSH----HHHHHHHHHHHHH-SCCC
T ss_pred CCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcc----hhhhccHHHhhhc-CCcC
Confidence 35677874 9999999999999999999999999999999999999988 65443221 2334666665543 7899
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCc-----eEEEEEEC
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICN-----LWVMEFYK 112 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~-----~~vie~~~ 112 (112)
+|.++|.++|+++||+.+++.+.++. .++||++|
T Consensus 317 ~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 317 RTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 99999999999999999999988765 89999986
No 14
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=2.7e-19 Score=126.24 Aligned_cols=107 Identities=21% Similarity=0.438 Sum_probs=85.4
Q ss_pred CCCCCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee--ecCCCCCCchhhhhhhhhchhhhhcCCCce
Q 038113 1 MFQNVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET--ILPKLPETRTLSKIISQGDVLMMTQNPGGK 77 (112)
Q Consensus 1 ~f~~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 77 (112)
+++++|.. |+|++++++|+|+++++.++|++++++|+|||+++|.|. +.++.... . ....+++.|+... +|+
T Consensus 241 ~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~-~---~~~~~~~~~~~~~-~~~ 315 (374)
T 1qzz_A 241 FFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADR-F---FSTLLDLRMLTFM-GGR 315 (374)
T ss_dssp TTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------H-H---HHHHHHHHHHHHH-SCC
T ss_pred CCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCc-c---hhhhcchHHHHhC-CCc
Confidence 35678874 999999999999999999999999999999999999998 76654321 1 2345666665543 789
Q ss_pred ecCHHHHHHHHHhcCCCeeEEEEeCCce-----EEEEEEC
Q 038113 78 ERTKHELMTLVTGAGFGGIRFESFICNL-----WVMEFYK 112 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~-----~vie~~~ 112 (112)
.+|.++|.++|+++||+.+++.+.++.. ++|+++|
T Consensus 316 ~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 316 VRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp CCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 9999999999999999999999988777 9999875
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.78 E-value=9.9e-19 Score=121.62 Aligned_cols=105 Identities=19% Similarity=0.282 Sum_probs=87.9
Q ss_pred CCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHH
Q 038113 4 NVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKH 82 (112)
Q Consensus 4 ~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~ 82 (112)
++|++ |+|++++++|+|+++++.++|++++++|+|||+++|+|...++....+. ....+++.|+....+++.+|.+
T Consensus 228 ~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~t~~ 304 (335)
T 2r3s_A 228 DYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPP---DAAAFSLVMLATTPNGDAYTFA 304 (335)
T ss_dssp CCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSH---HHHHHHHHHHHHSSSCCCCCHH
T ss_pred CCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCch---HHHHHHHHHHeeCCCCCcCCHH
Confidence 55654 9999999999999999999999999999999999999998876543322 2345667776655578999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCceEEEEEE
Q 038113 83 ELMTLVTGAGFGGIRFESFICNLWVMEFY 111 (112)
Q Consensus 83 e~~~ll~~aGf~~~~~~~~~~~~~vie~~ 111 (112)
+|.++|+++||+.+++.+..+..++|+++
T Consensus 305 ~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 305 EYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 99999999999999999988777877765
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.77 E-value=4.1e-18 Score=119.95 Aligned_cols=102 Identities=11% Similarity=0.187 Sum_probs=83.2
Q ss_pred CCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCcee----c
Q 038113 4 NVAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKE----R 79 (112)
Q Consensus 4 ~~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----r 79 (112)
++|++|+|++++++|+|+|+++.++|++++++|+|||+++|+|...++. ..+.. ...+ .|+....+|+. +
T Consensus 253 ~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~---~~~~--~~~~~~~~g~~~~~~~ 326 (359)
T 1x19_A 253 SYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPNF---DYLS--HYILGAGMPFSVLGFK 326 (359)
T ss_dssp CCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCCH---HHHH--HHGGGGGSSCCCCCCC
T ss_pred CCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCchH---HHHH--HHHHhcCCCCcccCCC
Confidence 4555699999999999999999999999999999999999999988765 22211 1222 33332335777 9
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 80 TKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|.++|.++|+++||+.+++.+.+ ..++|+++|
T Consensus 327 t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 327 EQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp CGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred CHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 99999999999999999999887 889999987
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.40 E-value=7.2e-13 Score=90.04 Aligned_cols=106 Identities=11% Similarity=0.063 Sum_probs=70.5
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hhhhhhhh----chhhh-------hcCC
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRT-LSKIISQG----DVLMM-------TQNP 74 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~----~~~~~-------~~~~ 74 (112)
+.|+|++..+||++++++..++|++++++|+|||++++.|....+++.... .......+ ..... ....
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~ 218 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLEN 218 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHH
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcc
Confidence 459999999999999998899999999999999999999988765532110 00000000 00000 0000
Q ss_pred CceecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 75 GGKERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
--...|.+++.++|++|||+.++++.-..++.-+.++|
T Consensus 219 ~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 219 VMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp HCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred cccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 01245889999999999999998765433444455554
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=3.4e-12 Score=84.37 Aligned_cols=102 Identities=17% Similarity=0.171 Sum_probs=73.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhh-------chh------hhhcCCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQG-------DVL------MMTQNPG 75 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~ 75 (112)
|+|++.+++|++++++..++|+++++.|+|||++++.+...++....... ....+ ... .......
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENL--NKTIWRQYVENSGLTEEEIAAGYERSKL 188 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHH--HHHHHHHHHHTSSCCHHHHHTTC----C
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhH--HHHHHHHHHHhcCCCHHHHHHHHHhccc
Confidence 99999999999999888899999999999999999999887654211100 00000 000 0000113
Q ss_pred ceecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 76 GKERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 76 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
...+|.+++.++|++|||+.+++.....+++++-.+|
T Consensus 189 ~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 189 DKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp CCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred ccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 3456899999999999999999988777777766554
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.28 E-value=3.8e-11 Score=78.52 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=68.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++ ...+|+++++.|+|||++++.+.........+. ....++.++|.+++
T Consensus 108 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l 168 (219)
T 3dh0_A 108 DFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPP-----------------PEEVYSEWEVGLIL 168 (219)
T ss_dssp EEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCC-----------------GGGSCCHHHHHHHH
T ss_pred eEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCCc-----------------hhcccCHHHHHHHH
Confidence 99999999999987 468999999999999999999977665432211 11235899999999
Q ss_pred HhcCCCeeEEEEeCCceEEEEEEC
Q 038113 89 TGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
+++||+.++.....+....+.++|
T Consensus 169 ~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 169 EDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHCCCEEEEEEeeCCceEEEEEEe
Confidence 999999999998887777776664
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.20 E-value=7.6e-11 Score=76.76 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=59.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCc------eecCHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGG------KERTKH 82 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~rt~~ 82 (112)
|+|++.+++|++++++...+|+++++.|+|||++++.+...+...............-.... ..+. ...+.+
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTL--QDGRSFRIVKVFRSPA 186 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEEC--TTSCEEEEECCCCCHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeec--CCcchhhHhhcCCCHH
Confidence 99999999999999888999999999999999999999866432211000000000000000 0011 234999
Q ss_pred HHHHHHHhcCCCeeEEEE
Q 038113 83 ELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 83 e~~~ll~~aGf~~~~~~~ 100 (112)
+|.++|+++||++.....
T Consensus 187 ~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDEV 204 (218)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEeeec
Confidence 999999999999544433
No 21
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.18 E-value=9.3e-11 Score=78.14 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=63.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++++..++|+++++.|+|||++++.+........ ..+. ......++.++|.++|
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---------LVDK-----EDSSLTRSDIHYKRLF 225 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------EEET-----TTTEEEBCHHHHHHHH
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------eecc-----cCCcccCCHHHHHHHH
Confidence 9999999999999988999999999999999999999975543211 0110 1134567999999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+.+++....
T Consensus 226 ~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 226 NESGVRVVKEAFQE 239 (254)
T ss_dssp HHHTCCEEEEEECT
T ss_pred HHCCCEEEEeeecC
Confidence 99999999887654
No 22
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.17 E-value=7.6e-11 Score=74.36 Aligned_cols=82 Identities=15% Similarity=0.078 Sum_probs=66.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++ ...+++++++.|+|||++++.+.........+. ....++.++|.++|
T Consensus 77 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l 137 (170)
T 3i9f_A 77 DFILFANSFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGPP-----------------LSIRMDEKDYMGWF 137 (170)
T ss_dssp EEEEEESCSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC-----------------GGGCCCHHHHHHHT
T ss_pred EEEEEccchhcccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCch-----------------HhhhcCHHHHHHHH
Confidence 99999999999986 468999999999999999999987655432211 11226899999999
Q ss_pred HhcCCCeeEEEEeCCceEEEEEE
Q 038113 89 TGAGFGGIRFESFICNLWVMEFY 111 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~vie~~ 111 (112)
+ ||+.++..........+.++
T Consensus 138 ~--Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 138 S--NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp T--TEEEEEEECSSTTEEEEEEE
T ss_pred h--CcEEEEccCCCCceEEEEEe
Confidence 9 99999999888777766665
No 23
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.16 E-value=2.8e-10 Score=74.42 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=67.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhh-cCCCceecCHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMT-QNPGGKERTKHELMTL 87 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~rt~~e~~~l 87 (112)
|+|++.+++|++++.+...+|+++++.|+|||++++.++..+..................... ........|.++|.++
T Consensus 108 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (220)
T 3hnr_A 108 DTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTI 187 (220)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHH
T ss_pred EEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHH
Confidence 999999999999998888899999999999999999987665332110000000000000000 0001123488999999
Q ss_pred HHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 88 VTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 88 l~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
|+++||+++.+. ..+..-++++.|
T Consensus 188 l~~aGf~v~~~~-~~~~~w~~~~~~ 211 (220)
T 3hnr_A 188 FENNGFHVTFTR-LNHFVWVMEATK 211 (220)
T ss_dssp HHHTTEEEEEEE-CSSSEEEEEEEE
T ss_pred HHHCCCEEEEee-ccceEEEEeehh
Confidence 999999766544 446666776654
No 24
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.15 E-value=1.8e-10 Score=78.32 Aligned_cols=97 Identities=15% Similarity=0.185 Sum_probs=68.1
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCC----C-chhhhhhhhhchhhhhcCCCcee
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPE----T-RTLSKIISQGDVLMMTQNPGGKE 78 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~g~~ 78 (112)
+|+. |+|++..++|++++++..++|+++++.|+|||++++.+...+.... . +.........+.......+++..
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (287)
T 1kpg_A 126 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRL 205 (287)
T ss_dssp CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCC
T ss_pred CCCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCC
Confidence 4433 9999999999998777889999999999999999999987654211 0 00000000111110111246777
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.|.+++.++++++||+++++...
T Consensus 206 ~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 206 PSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcEEEEEEeC
Confidence 89999999999999999988765
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.15 E-value=1.5e-11 Score=80.05 Aligned_cols=97 Identities=13% Similarity=0.199 Sum_probs=63.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhh-chhhhhcCCCceecCHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQG-DVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~rt~~e~~~l 87 (112)
|+|++.+++|++++ ..++|+++++.|+|||++++.+...+............... ...... ..+...++.++|.++
T Consensus 113 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 189 (219)
T 3dlc_A 113 DLIVSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFN-RKNISQENVERFQNV 189 (219)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHH-HHHSSHHHHHHHHHH
T ss_pred cEEEECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhh-hhccccCCHHHHHHH
Confidence 99999999999976 46899999999999999999875543311000000000000 000000 012234578999999
Q ss_pred HHhcCCCeeEEEEeCCceEEE
Q 038113 88 VTGAGFGGIRFESFICNLWVM 108 (112)
Q Consensus 88 l~~aGf~~~~~~~~~~~~~vi 108 (112)
|+++||+.+++.....+..++
T Consensus 190 l~~aGf~~v~~~~~~~~~~~~ 210 (219)
T 3dlc_A 190 LDEIGISSYEIILGDEGFWII 210 (219)
T ss_dssp HHHHTCSSEEEEEETTEEEEE
T ss_pred HHHcCCCeEEEEecCCceEEE
Confidence 999999999998776655443
No 26
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.14 E-value=2.2e-10 Score=76.10 Aligned_cols=79 Identities=18% Similarity=0.381 Sum_probs=64.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++++..++|+++++.|+|||++++.+...+. .. .++. ..+...++.++|.++|
T Consensus 148 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~-------~~~~-----~~~~~~~~~~~~~~~l 212 (241)
T 2ex4_A 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE---GV-------ILDD-----VDSSVCRDLDVVRRII 212 (241)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS---SE-------EEET-----TTTEEEEBHHHHHHHH
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC---cc-------eecc-----cCCcccCCHHHHHHHH
Confidence 9999999999999988889999999999999999999987764 11 0110 1234457999999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+.+++....
T Consensus 213 ~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 213 CSAGLSLLAEERQE 226 (241)
T ss_dssp HHTTCCEEEEEECC
T ss_pred HHcCCeEEEeeecC
Confidence 99999999987653
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.13 E-value=2.2e-10 Score=76.62 Aligned_cols=85 Identities=21% Similarity=0.240 Sum_probs=64.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++++..++|+++++.|+|||++++.+...+....-.. .+.... . ..+...++.++|.++|
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--~~~~~~----~--~~~~~~~~~~~~~~~l 193 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD--EFKEYV----K--QRKYTLITVEEYADIL 193 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH--HHHHHH----H--HHTCCCCCHHHHHHHH
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH--HHHHHH----h--cCCCCCCCHHHHHHHH
Confidence 9999999999998888899999999999999999999987765211110 010001 0 0133457999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 194 ~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 194 TACNFKNVVSKDL 206 (266)
T ss_dssp HHTTCEEEEEEEC
T ss_pred HHcCCeEEEEEeC
Confidence 9999999988765
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=2.6e-10 Score=73.75 Aligned_cols=81 Identities=11% Similarity=-0.053 Sum_probs=64.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++++..++|+++++.|+|||++++.+...+... . +... ......++.++|.++|
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~--------~~~~----~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 104 AGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE--P--------MYHP----VATAYRWPLPELAQAL 169 (203)
T ss_dssp EEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE--E--------ECCS----SSCEEECCHHHHHHHH
T ss_pred EEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh--h--------hhch----hhhhccCCHHHHHHHH
Confidence 999999999999977789999999999999999999886554311 0 0000 1134567999999999
Q ss_pred HhcCCCeeEEEEeCC
Q 038113 89 TGAGFGGIRFESFIC 103 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~ 103 (112)
+++||+++++....+
T Consensus 170 ~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 170 ETAGFQVTSSHWDPR 184 (203)
T ss_dssp HHTTEEEEEEEECTT
T ss_pred HHCCCcEEEEEecCC
Confidence 999999999887643
No 29
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.10 E-value=5.9e-11 Score=79.77 Aligned_cols=104 Identities=11% Similarity=0.059 Sum_probs=68.1
Q ss_pred cEEEecc-ccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch------------hhh--------hhhhhc
Q 038113 9 DAIYMKW-ILHDWSD-EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRT------------LSK--------IISQGD 66 (112)
Q Consensus 9 D~v~~~~-vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~------------~~~--------~~~~~~ 66 (112)
|+|++.. ++|++++ ++..++|+++++.|+|||+++|.+...++.-.... ... ....+.
T Consensus 112 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
T 3pfg_A 112 SAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIE 191 (263)
T ss_dssp EEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred CEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEE
Confidence 9999998 9999975 56889999999999999999997544433211000 000 000011
Q ss_pred hhhhhcCCC-----------ceecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 67 VLMMTQNPG-----------GKERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 67 ~~~~~~~~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
+.+.....+ .+.+|.++|.++|+++||+++++....+...++.++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 192 VHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 111110001 2345899999999999999998876666666676664
No 30
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.09 E-value=6.2e-11 Score=78.25 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=67.0
Q ss_pred cEEE-eccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchh------------hh--------hhhhhc
Q 038113 9 DAIY-MKWILHDWSD-EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTL------------SK--------IISQGD 66 (112)
Q Consensus 9 D~v~-~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~------------~~--------~~~~~~ 66 (112)
|+|+ ..+++|++++ ++..++|+++++.|+|||++++.+...++....... .. ......
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRME 181 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEE
Confidence 9999 4559999864 668899999999999999999987655443211000 00 000011
Q ss_pred hhhhhcCCCc-----------eecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 67 VLMMTQNPGG-----------KERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 67 ~~~~~~~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
..++....++ +.+|.++|+++|+++||+++.+....+...++.++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 182 VHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 1111101011 346999999999999997766554456678888875
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.09 E-value=1.6e-10 Score=77.47 Aligned_cols=86 Identities=13% Similarity=0.292 Sum_probs=62.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|+++|. .++|++++++|+|||++++.+...+..+ .......... ..........++.++|.++|
T Consensus 105 D~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 177 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPEND---AFDVFYNYVE--KERDYSHHRAWKKSDWLKML 177 (260)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSSH---HHHHHHHHHH--HHHCTTCCCCCBHHHHHHHH
T ss_pred EEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCCH---HHHHHHHHHH--HhcCccccCCCCHHHHHHHH
Confidence 999999999999985 5899999999999999999998766432 1111111111 11111134567899999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 178 ~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 178 EEAGFELEELHCF 190 (260)
T ss_dssp HHHTCEEEEEEEE
T ss_pred HHCCCeEEEEEEe
Confidence 9999998877654
No 32
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.08 E-value=1.1e-09 Score=72.77 Aligned_cols=88 Identities=15% Similarity=0.256 Sum_probs=65.0
Q ss_pred CCCcc--cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCH
Q 038113 4 NVAKG--DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTK 81 (112)
Q Consensus 4 ~~P~~--D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~ 81 (112)
++|++ |+|++.+++|++++++..++|+++++.|+|||++++..+.... . . ...... ....+....+.
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~--~----~~~~~~--~~~~~~~~~~~ 164 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS---L--Y----SLINFY--IDPTHKKPVHP 164 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS---H--H----HHHHHT--TSTTCCSCCCH
T ss_pred hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch---h--H----HHHHHh--cCccccccCCH
Confidence 45643 9999999999999888899999999999999999997654221 1 0 001100 11123455689
Q ss_pred HHHHHHHHhcCCCeeEEEEeC
Q 038113 82 HELMTLVTGAGFGGIRFESFI 102 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~~ 102 (112)
+++.++++++||+.+++....
T Consensus 165 ~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 165 ETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHCCCeEEEEEEec
Confidence 999999999999999887654
No 33
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.06 E-value=1.1e-10 Score=76.58 Aligned_cols=102 Identities=11% Similarity=-0.009 Sum_probs=68.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc--h-hhhhhhhhchhhhhcC------------
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETR--T-LSKIISQGDVLMMTQN------------ 73 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~--~-~~~~~~~~~~~~~~~~------------ 73 (112)
|+|++..++|.+..++..++|+++++.|+|||++++.+...+...... . ......... ......
T Consensus 105 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 183 (227)
T 1ve3_A 105 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWIS-KVIPDQEERTVVIEFKSE 183 (227)
T ss_dssp EEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CC-EEEEETTTTEEEEEC---
T ss_pred EEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeec-ccccCccccEEEEEeccc
Confidence 999999998888887889999999999999999999987532211000 0 000000000 000000
Q ss_pred -----CCceecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEEEC
Q 038113 74 -----PGGKERTKHELMTLVTGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 74 -----~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
.....++ .+|.++|+++||+.+++.+++...++|+++|
T Consensus 184 ~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 184 QDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp --CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 0011222 4899999999999999999988888999876
No 34
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.06 E-value=5.9e-10 Score=73.75 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=62.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+...++|++++++..++|+++++.|+|||++++.+.........+ ....+.++|.++|
T Consensus 134 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l 194 (235)
T 3lcc_A 134 DLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP-------------------PYKVDVSTFEEVL 194 (235)
T ss_dssp EEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS-------------------SCCCCHHHHHHHH
T ss_pred eEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC-------------------CccCCHHHHHHHH
Confidence 999999999999988889999999999999999999886554332221 1125889999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+.+++....
T Consensus 195 ~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 195 VPIGFKAVSVEENP 208 (235)
T ss_dssp GGGTEEEEEEEECT
T ss_pred HHcCCeEEEEEecC
Confidence 99999999887663
No 35
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.06 E-value=5.8e-10 Score=76.09 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=62.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|++++ ..++|+++++.|+|||++++.+...+........ ...+.... .....+.++|.++|
T Consensus 152 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~l 221 (297)
T 2o57_A 152 DFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI---QPILDRIK-----LHDMGSLGLYRSLA 221 (297)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG---HHHHHHHT-----CSSCCCHHHHHHHH
T ss_pred eEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH---HHHHHHhc-----CCCCCCHHHHHHHH
Confidence 99999999999998 5799999999999999999999877654322111 11111111 12245899999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+++++...
T Consensus 222 ~~aGf~~~~~~~~ 234 (297)
T 2o57_A 222 KECGLVTLRTFSR 234 (297)
T ss_dssp HHTTEEEEEEEEC
T ss_pred HHCCCeEEEEEEC
Confidence 9999999988764
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.05 E-value=2.7e-10 Score=75.78 Aligned_cols=86 Identities=16% Similarity=0.327 Sum_probs=62.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|+++|. ..+|+++++.|+|||++++.+...+..+ .......... ......+.+.++.++|.++|
T Consensus 89 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll 161 (239)
T 1xxl_A 89 DIITCRYAAHHFSDV--RKAVREVARVLKQDGRFLLVDHYAPEDP---VLDEFVNHLN--RLRDPSHVRESSLSEWQAMF 161 (239)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECBCSSH---HHHHHHHHHH--HHHCTTCCCCCBHHHHHHHH
T ss_pred EEEEECCchhhccCH--HHHHHHHHHHcCCCcEEEEEEcCCCCCh---hHHHHHHHHH--HhccccccCCCCHHHHHHHH
Confidence 999999999999874 6899999999999999999998765432 1111111111 11111234567999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 162 ~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 162 SANQLAYQDIQKW 174 (239)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHCCCcEEEEEee
Confidence 9999998877654
No 37
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.04 E-value=1.7e-09 Score=74.62 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=67.8
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc----hhh-hhhhhhchhhhhcCCCcee
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETR----TLS-KIISQGDVLMMTQNPGGKE 78 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~g~~ 78 (112)
+|.. |+|++..++|++++++..++|+++++.|+|||++++.+...+...... +.. ......+........++..
T Consensus 152 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T 2fk8_A 152 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRL 231 (318)
T ss_dssp CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred CCCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcC
Confidence 3443 999999999999887789999999999999999999998765421100 000 0000001111011236677
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
++.+++.++++++||+++++...
T Consensus 232 ~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 232 PSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CCHHHHHHHHHHTTCBCCCCEEC
T ss_pred CCHHHHHHHHHhCCCEEEEEEec
Confidence 89999999999999999887664
No 38
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.04 E-value=6.7e-10 Score=74.82 Aligned_cols=86 Identities=16% Similarity=0.065 Sum_probs=63.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|++++. .++|+++++.|+|||++++.+.......... .. ..++..... ...+...+.++|.+++
T Consensus 131 D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~~~~~~~~l 203 (273)
T 3bus_A 131 DAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGA-KK---EAVDAFRAG-GGVLSLGGIDEYESDV 203 (273)
T ss_dssp EEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHH-HH---HHHHHHHHH-HTCCCCCCHHHHHHHH
T ss_pred cEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChh-HH---HHHHHHHhh-cCccCCCCHHHHHHHH
Confidence 999999999999875 6899999999999999999998776432211 10 111111011 1245678999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+++++...
T Consensus 204 ~~aGf~~~~~~~~ 216 (273)
T 3bus_A 204 RQAELVVTSTVDI 216 (273)
T ss_dssp HHTTCEEEEEEEC
T ss_pred HHcCCeEEEEEEC
Confidence 9999999988765
No 39
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.03 E-value=7e-10 Score=75.68 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=59.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|+|++..+||+++|++..++|++++++|+|||+|++.+...+. + ..... ..+..... ......||.+|+.++
T Consensus 158 ~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~--~~~~~---~~~~~~~~-~~~~~~~s~~ei~~~ 230 (274)
T 2qe6_A 158 PAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-L--PAQQK---LARITREN-LGEGWARTPEEIERQ 230 (274)
T ss_dssp CCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-C--HHHHH---HHHHHHHH-HSCCCCBCHHHHHHT
T ss_pred CEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-h--HHHHH---HHHHHHhc-CCCCccCCHHHHHHH
Confidence 49999999999999988899999999999999999999977542 1 11111 11111111 114567899999999
Q ss_pred HHhcCCCeeE
Q 038113 88 VTGAGFGGIR 97 (112)
Q Consensus 88 l~~aGf~~~~ 97 (112)
| +||++++
T Consensus 231 l--~G~~l~~ 238 (274)
T 2qe6_A 231 F--GDFELVE 238 (274)
T ss_dssp T--TTCEECT
T ss_pred h--CCCeEcc
Confidence 9 6998765
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.01 E-value=2.4e-09 Score=73.62 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=67.0
Q ss_pred cEEEeccccccCChHH-HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchh-h--hh------hhhhchhhhhcCCCcee
Q 038113 9 DAIYMKWILHDWSDEH-CLKLFKKCYKSIPKDGMVIIVETILPKLPETRTL-S--KI------ISQGDVLMMTQNPGGKE 78 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~-~--~~------~~~~~~~~~~~~~~g~~ 78 (112)
|+|++..++|++++.+ ..++|+++++.|+|||++++.+...+........ . .. .................
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNAL 268 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhcc
Confidence 9999999999997654 5679999999999999999988665433211100 0 00 00000000000001134
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeC-CceEEEEEEC
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFI-CNLWVMEFYK 112 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~~~ 112 (112)
++.+++.++|+++||+++++.... +....+.++|
T Consensus 269 ~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 269 RTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp CCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred CCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 799999999999999999988653 3444555554
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.01 E-value=9.1e-10 Score=71.64 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=60.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++++...+|+++++.|+|||++++........... ... .....++.++|.++|
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~l 168 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD--------KLA-------RYYNYPSEEWLRARY 168 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC--------TTS-------CEECCCCHHHHHHHH
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc--------ccc-------hhccCCCHHHHHHHH
Confidence 99999999999998889999999999999999999986433321100 000 012346899999999
Q ss_pred HhcC-CCeeEEEEe
Q 038113 89 TGAG-FGGIRFESF 101 (112)
Q Consensus 89 ~~aG-f~~~~~~~~ 101 (112)
+++| |+++++...
T Consensus 169 ~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 169 AEAGTWASVAVESS 182 (211)
T ss_dssp HHHCCCSEEEEEEE
T ss_pred HhCCCcEEEEEEec
Confidence 9999 999988754
No 42
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.00 E-value=1.2e-09 Score=71.62 Aligned_cols=90 Identities=18% Similarity=0.122 Sum_probs=62.1
Q ss_pred cEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhc--------------C
Q 038113 9 DAIYMKWILHDWSDE-HCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQ--------------N 73 (112)
Q Consensus 9 D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 73 (112)
|+|++.+++|++++. +..++|+++++.|+|||++++.+....... +.... ........... .
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL--KLYRK-RYLHDFPITKEEGSFLARDPETGETE 179 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS--HHHHH-HHHHHHHHHCSTTEEEEECTTTCCEE
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH--HHHHH-HhhhhccchhhhcceEecccccCCcc
Confidence 999999999999864 467999999999999999999987654321 11110 00001000000 0
Q ss_pred CCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 74 PGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 74 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.....++.++|.++|+++||+++++...
T Consensus 180 ~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 180 FIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 0124579999999999999999988643
No 43
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.98 E-value=1.8e-09 Score=71.42 Aligned_cols=83 Identities=16% Similarity=0.061 Sum_probs=60.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++. ..+|+++++.|+|||++++.+.......... ........ .......+.+++.+++
T Consensus 118 D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~l 187 (242)
T 3l8d_A 118 EAIMAINSLEWTEEP--LRALNEIKRVLKSDGYACIAILGPTAKPREN---SYPRLYGK-----DVVCNTMMPWEFEQLV 187 (242)
T ss_dssp EEEEEESCTTSSSCH--HHHHHHHHHHEEEEEEEEEEEECTTCGGGGG---GGGGGGTC-----CCSSCCCCHHHHHHHH
T ss_pred cEEEEcChHhhccCH--HHHHHHHHHHhCCCeEEEEEEcCCcchhhhh---hhhhhccc-----cccccCCCHHHHHHHH
Confidence 999999999999874 5899999999999999999986443322111 11111111 1133457899999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||++++...+
T Consensus 188 ~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 188 KEQGFKVVDGIGV 200 (242)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHcCCEEEEeecc
Confidence 9999999988755
No 44
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.97 E-value=1.9e-09 Score=76.52 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=64.0
Q ss_pred CCCcc--cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCH
Q 038113 4 NVAKG--DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTK 81 (112)
Q Consensus 4 ~~P~~--D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~ 81 (112)
++|++ |+|++..++|+++|. .++|+++++.|+|||++++.+...+...... . ........ ...+...+.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~-----~~~~~~~~-~~~~~~~~~ 231 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRDGGELYFSDVYADRRLSEA-A-----QQDPILYG-ECLGGALYL 231 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEESSCCCHH-H-----HHCHHHHH-TTCTTCCBH
T ss_pred CCCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCCCCEEEEEEeccccccCHh-H-----hhhHHHhh-cccccCCCH
Confidence 45543 999999999999884 6999999999999999999998776432211 1 01111111 113455788
Q ss_pred HHHHHHHHhcCCCeeEEEE
Q 038113 82 HELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~ 100 (112)
++|.++|+++||+.+++..
T Consensus 232 ~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 232 EDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHCCCceEEEEe
Confidence 9999999999999887654
No 45
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.96 E-value=1.8e-09 Score=70.46 Aligned_cols=74 Identities=14% Similarity=0.208 Sum_probs=60.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++| +++ ...+|+++++.|+|||++++.+.... ..+.++|.+++
T Consensus 117 D~v~~~~~l~-~~~--~~~~l~~~~~~L~~gG~l~i~~~~~~---------------------------~~~~~~~~~~l 166 (215)
T 2zfu_A 117 DVAVFCLSLM-GTN--IRDFLEEANRVLKPGGLLKVAEVSSR---------------------------FEDVRTFLRAV 166 (215)
T ss_dssp EEEEEESCCC-SSC--HHHHHHHHHHHEEEEEEEEEEECGGG---------------------------CSCHHHHHHHH
T ss_pred eEEEEehhcc-ccC--HHHHHHHHHHhCCCCeEEEEEEcCCC---------------------------CCCHHHHHHHH
Confidence 9999999998 444 57899999999999999999874210 02788999999
Q ss_pred HhcCCCeeEEEEeCCceEEEEEEC
Q 038113 89 TGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
+++||++++.....+...++.++|
T Consensus 167 ~~~Gf~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 167 TKLGFKIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp HHTTEEEEEEECCSTTCEEEEEEE
T ss_pred HHCCCEEEEEecCCCeEEEEEEEe
Confidence 999999988766666677777764
No 46
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.96 E-value=1e-09 Score=75.11 Aligned_cols=104 Identities=8% Similarity=0.142 Sum_probs=66.9
Q ss_pred cEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-----h----hh-hhh---------hhchh
Q 038113 9 DAIYMK-WILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRT-----L----SK-IIS---------QGDVL 68 (112)
Q Consensus 9 D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-----~----~~-~~~---------~~~~~ 68 (112)
|+|++. .++|.+++++..++|+++++.|+|||++++.....+....... . .. +.. ...+.
T Consensus 152 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEIT 231 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEE
T ss_pred CEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEE
Confidence 988854 7888888888999999999999999999998765432100000 0 00 000 00000
Q ss_pred hhh----------cCCCceecCHHHHHHHHHhcCCCeeEEEEeC------CceEEEEEEC
Q 038113 69 MMT----------QNPGGKERTKHELMTLVTGAGFGGIRFESFI------CNLWVMEFYK 112 (112)
Q Consensus 69 ~~~----------~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~------~~~~vie~~~ 112 (112)
... .....+.+|.++|.++|+++||+++++.+.. ....++|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 232 IHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp EEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred EEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 000 0011235699999999999999999998874 2356777653
No 47
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.95 E-value=1.5e-09 Score=73.30 Aligned_cols=88 Identities=19% Similarity=0.263 Sum_probs=61.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC---CCCchhhh-hhhhhchhhhhcCCCceecCHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKL---PETRTLSK-IISQGDVLMMTQNPGGKERTKHEL 84 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~g~~rt~~e~ 84 (112)
|+|++.+++|++++. ..+|+++++.|+|||.+++.+...... +..+.... ....... .. ..++..++..++
T Consensus 107 D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~l 181 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRV--QA-YMKGNSLVGRQI 181 (276)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHH--HH-HTTCCTTGGGGH
T ss_pred eEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHH--HH-hcCCCcchHHHH
Confidence 999999999999986 489999999999999999998654322 11111110 0111111 11 124555677899
Q ss_pred HHHHHhcCCCeeEEEEe
Q 038113 85 MTLVTGAGFGGIRFESF 101 (112)
Q Consensus 85 ~~ll~~aGf~~~~~~~~ 101 (112)
.++|+++||+++++...
T Consensus 182 ~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 182 YPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHCCCCeEEEeeE
Confidence 99999999999988754
No 48
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.92 E-value=8.4e-09 Score=67.58 Aligned_cols=85 Identities=19% Similarity=0.175 Sum_probs=60.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++. .++|+++++.|+|||++++.+..... . ........... .........++.++|.++|
T Consensus 104 D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~----~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l 175 (219)
T 1vlm_A 104 DFALMVTTICFVDDP--ERALKEAYRILKKGGYLIVGIVDRES----F-LGREYEKNKEK-SVFYKNARFFSTEELMDLM 175 (219)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHHHHHEEEEEEEEEEEECSSS----H-HHHHHHHTTTC--CCSTTCCCCCHHHHHHHH
T ss_pred eEEEEcchHhhccCH--HHHHHHHHHHcCCCcEEEEEEeCCcc----H-HHHHHHHHhcC-cchhcccccCCHHHHHHHH
Confidence 999999999999874 68999999999999999998764321 1 11110001000 0011134557999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 176 ~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 176 RKAGFEEFKVVQT 188 (219)
T ss_dssp HHTTCEEEEEEEE
T ss_pred HHCCCeEEEEecc
Confidence 9999999988754
No 49
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.91 E-value=5.1e-09 Score=71.54 Aligned_cols=82 Identities=15% Similarity=0.055 Sum_probs=56.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+++++||+++|. .+.|+++++.|+|||++++.+...+ .. .......+...+. .......++.++|.++|
T Consensus 137 D~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 208 (292)
T 2aot_A 137 DFIHMIQMLYYVKDI--PATLKFFHSLLGTNAKMLIIVVSGS----SG-WDKLWKKYGSRFP-QDDLCQYITSDDLTQML 208 (292)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEECTT----SH-HHHHHHHHGGGSC-CCTTCCCCCHHHHHHHH
T ss_pred eEEEEeeeeeecCCH--HHHHHHHHHHcCCCcEEEEEEecCC----cc-HHHHHHHHHHhcc-CCCcccCCCHHHHHHHH
Confidence 999999999999985 5799999999999999999964321 11 1111000100000 00012456899999999
Q ss_pred HhcCCCeeEE
Q 038113 89 TGAGFGGIRF 98 (112)
Q Consensus 89 ~~aGf~~~~~ 98 (112)
+++||+.+..
T Consensus 209 ~~aGf~~~~~ 218 (292)
T 2aot_A 209 DNLGLKYECY 218 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCceEEE
Confidence 9999998764
No 50
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.90 E-value=4.8e-09 Score=66.53 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=50.3
Q ss_pred cEEEeccccccC-ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 9 DAIYMKWILHDW-SDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 9 D~v~~~~vlh~~-~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
|+|+..+++|++ ++. .++|+++++.|+|||++++.++....... ....++.++|.++
T Consensus 65 D~V~~~~~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 122 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVDN--------------------NSKVKTASKLCSA 122 (176)
T ss_dssp EEEEECCSTTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSCS--------------------SSSSCCHHHHHHH
T ss_pred eEEEECChhhhcccCH--HHHHHHHHHHCCCCEEEEEEccccccccc--------------------ccccCCHHHHHHH
Confidence 999999999999 664 68999999999999999997654332110 1123688999999
Q ss_pred HHhcCC
Q 038113 88 VTGAGF 93 (112)
Q Consensus 88 l~~aGf 93 (112)
|+++||
T Consensus 123 l~~aGf 128 (176)
T 2ld4_A 123 LTLSGL 128 (176)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 999999
No 51
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.89 E-value=4.9e-09 Score=69.17 Aligned_cols=89 Identities=15% Similarity=0.121 Sum_probs=60.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHH-hhCCCCCEEEEEeeecCCCCCCchhhhhhhhhc----hh-hhhcCCCceecCHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCY-KSIPKDGMVIIVETILPKLPETRTLSKIISQGD----VL-MMTQNPGGKERTKH 82 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~-~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~g~~rt~~ 82 (112)
|+|++.++||+++|. .++|++++ +.|+|||++++.++...... .........+. +. ......+.+.+|.+
T Consensus 105 D~v~~~~~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (250)
T 2p7i_A 105 DNIVLTHVLEHIDDP--VALLKRINDDWLAEGGRLFLVCPNANAVS--RQIAVKMGIISHNSAVTEAEFAHGHRCTYALD 180 (250)
T ss_dssp EEEEEESCGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEECTTCHH--HHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHH
T ss_pred cEEEEhhHHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcCChHHHH--HHHHHHcCccccchhcccccccccccccCCHH
Confidence 999999999999875 68999999 99999999999876432110 00000000000 00 00001234567999
Q ss_pred HHHHHHHhcCCCeeEEEEe
Q 038113 83 ELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 83 e~~~ll~~aGf~~~~~~~~ 101 (112)
++.++|+++||+++++...
T Consensus 181 ~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 181 TLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp HHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEeee
Confidence 9999999999999987653
No 52
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.89 E-value=9.9e-09 Score=70.30 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=66.3
Q ss_pred cEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-----hhhhhchhhhhcCCCc
Q 038113 9 DAIYMKWILHDWSD-------EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSK-----IISQGDVLMMTQNPGG 76 (112)
Q Consensus 9 D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g 76 (112)
|+|++..++|+++| ++..++|+++++.|+|||++++.+...++......... .....+.......+++
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 218 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG 218 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC
Confidence 99999999999955 56789999999999999999999987664321000000 0000011111113467
Q ss_pred eecCHHHHHHHHHhcCCCeeEEEEeC
Q 038113 77 KERTKHELMTLVTGAGFGGIRFESFI 102 (112)
Q Consensus 77 ~~rt~~e~~~ll~~aGf~~~~~~~~~ 102 (112)
...+.+++.++++++||+++++...+
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 78899999999999999999887654
No 53
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.88 E-value=3.7e-09 Score=70.49 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=62.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|++++ ..++|+++++.|+|||++++.+......+..... ...+. . ......++.++|.++|
T Consensus 105 D~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~----~-~~~~~~~~~~~~~~~l 174 (256)
T 1nkv_A 105 DVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEI---AQACG----V-SSTSDFLTLPGLVGAF 174 (256)
T ss_dssp EEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHH---HHTTT----C-SCGGGSCCHHHHHHHH
T ss_pred CEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHH---HHHHh----c-ccccccCCHHHHHHHH
Confidence 99999999999987 4789999999999999999999877654432211 11110 0 1123457999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 175 ~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 175 DDLGYDVVEMVLA 187 (256)
T ss_dssp HTTTBCCCEEEEC
T ss_pred HHCCCeeEEEEeC
Confidence 9999999887543
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.87 E-value=6.2e-09 Score=71.74 Aligned_cols=83 Identities=8% Similarity=0.004 Sum_probs=61.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|+++ ..++|+++++.|+|||++++.+....+....... ....+.... ....++.++|.++|
T Consensus 187 D~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~s~~~~~~~l 256 (312)
T 3vc1_A 187 TASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSK--WVSQINAHF-----ECNIHSRREYLRAM 256 (312)
T ss_dssp EEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCH--HHHHHHHHH-----TCCCCBHHHHHHHH
T ss_pred eEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhH--HHHHHHhhh-----cCCCCCHHHHHHHH
Confidence 9999999999994 6799999999999999999999877664321110 011111111 11357899999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+++++...
T Consensus 257 ~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 257 ADNRLVPHTIVDL 269 (312)
T ss_dssp HTTTEEEEEEEEC
T ss_pred HHCCCEEEEEEeC
Confidence 9999999988765
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.87 E-value=4.9e-09 Score=69.19 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=63.8
Q ss_pred cEEEecc-ccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCC----CCCc---hhhhhh-----------hhhchh
Q 038113 9 DAIYMKW-ILHDWSD-EHCLKLFKKCYKSIPKDGMVIIVETILPKL----PETR---TLSKII-----------SQGDVL 68 (112)
Q Consensus 9 D~v~~~~-vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~----~~~~---~~~~~~-----------~~~~~~ 68 (112)
|+|++.+ ++|++++ ++..++|+++++.|+|||++++.-...... +... ...... ....+.
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYIS 182 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEE
Confidence 9999998 9999954 668999999999999999998733211000 0000 000000 000011
Q ss_pred hhhcC----------CCceecCHHHHHHHHHhcCCCeeEEEEe--------CCceEEEEEEC
Q 038113 69 MMTQN----------PGGKERTKHELMTLVTGAGFGGIRFESF--------ICNLWVMEFYK 112 (112)
Q Consensus 69 ~~~~~----------~~g~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~vie~~~ 112 (112)
++... ...+.+|.++|.++|+++||+.+++... .....++.++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 183 FFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred EEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 11000 0124459999999999999999998754 22445666665
No 56
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.87 E-value=1.3e-08 Score=67.18 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=62.8
Q ss_pred cEEEecc-ccccC-ChHHHHHHHHHHHhhCCCCCEEEEEeeecC-------CC-----CCCchh--h------hhhhhhc
Q 038113 9 DAIYMKW-ILHDW-SDEHCLKLFKKCYKSIPKDGMVIIVETILP-------KL-----PETRTL--S------KIISQGD 66 (112)
Q Consensus 9 D~v~~~~-vlh~~-~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~-------~~-----~~~~~~--~------~~~~~~~ 66 (112)
|+|++.. ++|++ +.++..++|+++++.|+|||++++.-.... .. ...... . .......
T Consensus 98 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (243)
T 3d2l_A 98 DAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHE 177 (243)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEE
T ss_pred CEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEE
Confidence 9999886 99998 456788999999999999999987322110 00 000000 0 0000001
Q ss_pred hhhhhcCCCc-----------eecCHHHHHHHHHhcCCCeeEEEEe--------CCceEEEEEEC
Q 038113 67 VLMMTQNPGG-----------KERTKHELMTLVTGAGFGGIRFESF--------ICNLWVMEFYK 112 (112)
Q Consensus 67 ~~~~~~~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~vie~~~ 112 (112)
+.+.....+| +.+|.+++.++|+++||+++++... .+...++.++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 178 LTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 1111100011 3569999999999999999998753 12345666665
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.86 E-value=2.9e-08 Score=65.46 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=58.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC-CCchh-----hh----hhhhh-----chhhhhcC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLP-ETRTL-----SK----IISQG-----DVLMMTQN 73 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~-~~~~~-----~~----~~~~~-----~~~~~~~~ 73 (112)
|+|++.+++|++++ ..++|+++++.|+|||++++......... ..... .. ....+ ........
T Consensus 109 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 109 DLAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred eEEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 99999999999986 46899999999999999999875321000 00000 00 00000 00000001
Q ss_pred CCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 74 PGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 74 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.....+|.++|.++|+++||+++++...
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 1234469999999999999999988764
No 58
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.86 E-value=3.8e-09 Score=68.86 Aligned_cols=89 Identities=15% Similarity=0.045 Sum_probs=58.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhh-h-hhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKI-I-SQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++.+++| +++ ..++|+++++.|+|||++++.+............... . ................+|.++|.+
T Consensus 118 D~v~~~~~l~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 118 DLICANFALL-HQD--IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN 194 (227)
T ss_dssp EEEEEESCCC-SSC--CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH
T ss_pred cEEEECchhh-hhh--HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH
Confidence 9999999999 655 4689999999999999999988765433221100000 0 000000000001124569999999
Q ss_pred HHHhcCCCeeEEEE
Q 038113 87 LVTGAGFGGIRFES 100 (112)
Q Consensus 87 ll~~aGf~~~~~~~ 100 (112)
+|+++||+++++..
T Consensus 195 ~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 195 ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHTTEEEEEEEC
T ss_pred HHHHcCCeEEEEec
Confidence 99999999998875
No 59
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.86 E-value=4.2e-09 Score=71.10 Aligned_cols=80 Identities=11% Similarity=-0.040 Sum_probs=57.8
Q ss_pred ccEEEeccccccCC--hHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHH
Q 038113 8 GDAIYMKWILHDWS--DEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELM 85 (112)
Q Consensus 8 ~D~v~~~~vlh~~~--d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 85 (112)
.|+|+.+.+||+.. .++..++|+++++.|+|||++++.+...... . ...-.. ......+.+++.
T Consensus 157 fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-----~-----~~g~~~----~~~~~~~~~~l~ 222 (263)
T 2a14_A 157 ADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-----Y-----MVGKRE----FSCVALEKGEVE 222 (263)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-----E-----EETTEE----EECCCCCHHHHH
T ss_pred CCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-----c-----eeCCeE----eeccccCHHHHH
Confidence 49999999999853 2567899999999999999999987542210 0 000000 011235899999
Q ss_pred HHHHhcCCCeeEEEEe
Q 038113 86 TLVTGAGFGGIRFESF 101 (112)
Q Consensus 86 ~ll~~aGf~~~~~~~~ 101 (112)
++|+++||+++++...
T Consensus 223 ~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 223 QAVLDAGFDIEQLLHS 238 (263)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCEEEEEeec
Confidence 9999999999988764
No 60
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.85 E-value=6.4e-09 Score=69.35 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=60.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|+++ ..++|+++++.|+|||++++.+............ ...+.-. ....++.++|.++|
T Consensus 116 D~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~l 183 (257)
T 3f4k_A 116 DLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEI---EDFWMDA------YPEISVIPTCIDKM 183 (257)
T ss_dssp EEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHH---HHHHHHH------CTTCCBHHHHHHHH
T ss_pred EEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHH---HHHHHHh------CCCCCCHHHHHHHH
Confidence 9999999999994 3679999999999999999999875543322111 1111110 12246899999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+.++....+
T Consensus 184 ~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 184 ERAGYTPTAHFILP 197 (257)
T ss_dssp HHTTEEEEEEEECC
T ss_pred HHCCCeEEEEEECC
Confidence 99999999877654
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.83 E-value=3.4e-09 Score=69.19 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=59.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhh-hhhhchhh--hhcCCCceecCHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKI-ISQGDVLM--MTQNPGGKERTKHELM 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~g~~rt~~e~~ 85 (112)
|+|++.+++|++++. .++|+++++.|+|||++++..+..... ...... ...+.... .......+.+|.++|.
T Consensus 95 D~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEML 169 (230)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHH
T ss_pred CEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCCcceEEEecHHHHH
Confidence 999999999999875 589999999999999999987543211 000000 00000000 0000122457999999
Q ss_pred HHHHhcCCCeeEEEEe
Q 038113 86 TLVTGAGFGGIRFESF 101 (112)
Q Consensus 86 ~ll~~aGf~~~~~~~~ 101 (112)
++|+++||+.+++...
T Consensus 170 ~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 170 RMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCeEEEEEec
Confidence 9999999999988765
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.82 E-value=6.3e-09 Score=69.37 Aligned_cols=91 Identities=13% Similarity=0.071 Sum_probs=57.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC----------CCCchhh-hhhhhhc-----hhhhhc
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKL----------PETRTLS-KIISQGD-----VLMMTQ 72 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~----------~~~~~~~-~~~~~~~-----~~~~~~ 72 (112)
|+|++.+++|++++ ..++|+++++.|+|||++++........ ..+.... .....++ ......
T Consensus 110 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (253)
T 3g5l_A 110 NVVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGE 187 (253)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTE
T ss_pred EEEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccc
Confidence 99999999999976 5789999999999999999975432100 0000000 0000000 000000
Q ss_pred CCCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 73 NPGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 73 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
......+|.++|.++|+++||+++++...
T Consensus 188 ~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 188 DVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred cCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 00122349999999999999999998754
No 63
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.81 E-value=2.5e-08 Score=67.14 Aligned_cols=90 Identities=9% Similarity=-0.023 Sum_probs=60.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhh-hhhhchhh--hh---cCCCceecCHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKI-ISQGDVLM--MT---QNPGGKERTKH 82 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~~g~~rt~~ 82 (112)
|+|++.+++|++++.+ .+++.++..++|||++++.+...+...... .... ........ .. .......+|.+
T Consensus 124 D~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 200 (275)
T 3bkx_A 124 DRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLITPD 200 (275)
T ss_dssp SEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCCHH
T ss_pred EEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCCHH
Confidence 9999999999999865 478888888888999999998876543211 1110 00000000 00 00012357999
Q ss_pred HHHHHHHhcCCCeeEEEEe
Q 038113 83 ELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 83 e~~~ll~~aGf~~~~~~~~ 101 (112)
++.++++++||+++++..+
T Consensus 201 ~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 201 TLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHCCCeeEEEEEe
Confidence 9999999999999887655
No 64
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.80 E-value=1e-08 Score=69.00 Aligned_cols=82 Identities=11% Similarity=-0.014 Sum_probs=61.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|+++ ..++|+++++.|+|||++++.+............ ...+. .. ....++.+++.++|
T Consensus 116 D~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~---~~---~~~~~~~~~~~~~l 183 (267)
T 3kkz_A 116 DLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEI---NDFWM---DA---YPEIDTIPNQVAKI 183 (267)
T ss_dssp EEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHH---HHHHH---HH---CTTCEEHHHHHHHH
T ss_pred EEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHH---HHHHH---Hh---CCCCCCHHHHHHHH
Confidence 9999999999993 3689999999999999999999876544322111 11111 00 12346899999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+.+++..++
T Consensus 184 ~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 184 HKAGYLPVATFILP 197 (267)
T ss_dssp HHTTEEEEEEEECC
T ss_pred HHCCCEEEEEEECC
Confidence 99999999887764
No 65
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.78 E-value=5.1e-09 Score=71.07 Aligned_cols=92 Identities=10% Similarity=0.045 Sum_probs=60.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchh-hhhhhhhchh---hhhcCCCceecCHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTL-SKIISQGDVL---MMTQNPGGKERTKHEL 84 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~g~~rt~~e~ 84 (112)
|+|++.+++|++++. .++|+++++.|+|||++++.+............ .......... ..........++.+++
T Consensus 138 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 138 DLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred eEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 999999999999875 689999999999999999988754321100000 0000000000 0000012345689999
Q ss_pred HHHHHhcCCCeeEEEEeC
Q 038113 85 MTLVTGAGFGGIRFESFI 102 (112)
Q Consensus 85 ~~ll~~aGf~~~~~~~~~ 102 (112)
.++|+++||+++++..+.
T Consensus 216 ~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHHHTTCEEEEEEEES
T ss_pred HHHHHHCCCceeeeeeEE
Confidence 999999999999888764
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.77 E-value=6.4e-09 Score=67.27 Aligned_cols=88 Identities=6% Similarity=-0.101 Sum_probs=61.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc--hhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETR--TLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++.+++|+++.++..++++++++.|+|||++++.+...++..... .... ..+..........+...+.+++.+
T Consensus 91 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~ 168 (209)
T 2p8j_A 91 SFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGE--GEFLQLERGEKVIHSYVSLEEADK 168 (209)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEET--TEEEECC-CCCEEEEEECHHHHHH
T ss_pred eEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhcc--ccceeccCCCceeEEecCHHHHHH
Confidence 999999999999888889999999999999999999998765433211 0000 000000000001235669999999
Q ss_pred HHHhcCCCeeEE
Q 038113 87 LVTGAGFGGIRF 98 (112)
Q Consensus 87 ll~~aGf~~~~~ 98 (112)
+++++||...+.
T Consensus 169 ~~~~~g~~~~~~ 180 (209)
T 2p8j_A 169 YFKDMKVLFKED 180 (209)
T ss_dssp TTTTSEEEEEEE
T ss_pred HHhhcCceeeee
Confidence 999999876654
No 67
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.75 E-value=2e-08 Score=64.27 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=58.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|++++++..++|+++++.|+|||++++++....+....+ ......++.+++++++
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~ 162 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRRYY 162 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHHHT
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHHHh
Confidence 999999999999987789999999999999999999887765432111 0122345888999999
Q ss_pred HhcCCCeeEEEE
Q 038113 89 TGAGFGGIRFES 100 (112)
Q Consensus 89 ~~aGf~~~~~~~ 100 (112)
++ |++++...
T Consensus 163 ~~--f~~~~~~~ 172 (199)
T 2xvm_A 163 EG--WERVKYNE 172 (199)
T ss_dssp TT--SEEEEEEC
T ss_pred cC--CeEEEecc
Confidence 76 99887653
No 68
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.74 E-value=1.8e-08 Score=67.29 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=57.6
Q ss_pred cEEEeccccccCCh--HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSD--EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d--~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++..++|+.++ ++...+|+++++.|+|||++++.+..... .. ..-+.. ......+.+++.+
T Consensus 159 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-----~~----~~~~~~-----~~~~~~~~~~~~~ 224 (265)
T 2i62_A 159 DCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-----YY----MIGEQK-----FSSLPLGWETVRD 224 (265)
T ss_dssp EEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-----EE----EETTEE-----EECCCCCHHHHHH
T ss_pred cEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-----eE----EcCCcc-----ccccccCHHHHHH
Confidence 99999999995543 35789999999999999999998843221 00 000000 0112358899999
Q ss_pred HHHhcCCCeeEEEEeC
Q 038113 87 LVTGAGFGGIRFESFI 102 (112)
Q Consensus 87 ll~~aGf~~~~~~~~~ 102 (112)
+|+++||+++++....
T Consensus 225 ~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 225 AVEEAGYTIEQFEVIS 240 (265)
T ss_dssp HHHHTTCEEEEEEEEC
T ss_pred HHHHCCCEEEEEEEec
Confidence 9999999999887654
No 69
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.72 E-value=5.4e-08 Score=61.85 Aligned_cols=66 Identities=9% Similarity=0.011 Sum_probs=55.6
Q ss_pred cEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 9 DAIYMK-WILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 9 D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
|+|++. .++|++++++..++|+++++.|+|||++++..... ..++.+++.++
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~---------------------------~~~~~~~~~~~ 161 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG---------------------------RGWVFGDFLEV 161 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT---------------------------SSCCHHHHHHH
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC---------------------------CCcCHHHHHHH
Confidence 999998 89999998888999999999999999999864211 11578899999
Q ss_pred HHhcCCCeeEEEEe
Q 038113 88 VTGAGFGGIRFESF 101 (112)
Q Consensus 88 l~~aGf~~~~~~~~ 101 (112)
++++||+.++....
T Consensus 162 l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 162 AERVGLELENAFES 175 (195)
T ss_dssp HHHHTEEEEEEESS
T ss_pred HHHcCCEEeeeecc
Confidence 99999999887643
No 70
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.71 E-value=3.7e-08 Score=70.30 Aligned_cols=82 Identities=11% Similarity=0.150 Sum_probs=61.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|+++| ...+|+++++.|+|||++++..+..... .. ...++... ..+...+|.++|.+++
T Consensus 173 D~I~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~-----~~--~~~~~~~~---~~~~~~~s~~~l~~ll 240 (416)
T 4e2x_A 173 NVIYAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLGDI-----VA--KTSFDQIF---DEHFFLFSATSVQGMA 240 (416)
T ss_dssp EEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHHHH-----HH--HTCGGGCS---TTCCEECCHHHHHHHH
T ss_pred EEEEECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChHHh-----hh--hcchhhhh---hhhhhcCCHHHHHHHH
Confidence 99999999999986 5789999999999999999876543211 00 00111111 1245567999999999
Q ss_pred HhcCCCeeEEEEeC
Q 038113 89 TGAGFGGIRFESFI 102 (112)
Q Consensus 89 ~~aGf~~~~~~~~~ 102 (112)
+++||+++++...+
T Consensus 241 ~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 241 QRCGFELVDVQRLP 254 (416)
T ss_dssp HHTTEEEEEEEEEC
T ss_pred HHcCCEEEEEEEcc
Confidence 99999999988764
No 71
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.70 E-value=1.3e-08 Score=69.25 Aligned_cols=79 Identities=10% Similarity=0.194 Sum_probs=57.5
Q ss_pred cEEEeccccccCChH--HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDE--HCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++..+||+++++ +..++|+++++.|+|||++++.+...... . ..-+. ......++.++|.+
T Consensus 176 D~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~-----~----~~~~~-----~~~~~~~~~~~l~~ 241 (289)
T 2g72_A 176 DALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW-----Y----LAGEA-----RLTVVPVSEEEVRE 241 (289)
T ss_dssp EEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE-----E----EETTE-----EEECCCCCHHHHHH
T ss_pred CEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce-----E----EcCCe-----eeeeccCCHHHHHH
Confidence 999999999996543 57899999999999999999986432110 0 00000 00112358999999
Q ss_pred HHHhcCCCeeEEEEe
Q 038113 87 LVTGAGFGGIRFESF 101 (112)
Q Consensus 87 ll~~aGf~~~~~~~~ 101 (112)
+|+++||+++++...
T Consensus 242 ~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 242 ALVRSGYKVRDLRTY 256 (289)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCeEEEeeEe
Confidence 999999999887654
No 72
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.68 E-value=9.4e-08 Score=64.20 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=57.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|+++| ..++|+++++.|+ ||++++.+...+.....- . ...+.. ... ......++.+++. +|
T Consensus 96 D~v~~~~~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~-~---~~~~~~-~~~-~~~~~~~~~~~~~-~l 165 (261)
T 3ege_A 96 DGVISILAIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIW-L---YDYFPF-LWE-DALRFLPLDEQIN-LL 165 (261)
T ss_dssp SEEEEESCGGGCSS--HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCG-G---GGTCHH-HHH-HHHTSCCHHHHHH-HH
T ss_pred eEEEEcchHhhccC--HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHH-H---HHHHHH-Hhh-hhhhhCCCHHHHH-HH
Confidence 99999999999977 4689999999999 999999997544322110 0 000000 000 0012345678888 99
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+.+++...
T Consensus 166 ~~aGF~~v~~~~~ 178 (261)
T 3ege_A 166 QENTKRRVEAIPF 178 (261)
T ss_dssp HHHHCSEEEEEEC
T ss_pred HHcCCCceeEEEe
Confidence 9999999888765
No 73
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.66 E-value=2.6e-08 Score=67.75 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=58.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec-----C---CCCCCch---hhhhhhhhchhhhhcCCCce
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL-----P---KLPETRT---LSKIISQGDVLMMTQNPGGK 77 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~-----~---~~~~~~~---~~~~~~~~~~~~~~~~~~g~ 77 (112)
|+|++.+++|+++|. .++|+++++.|+|||++++.++.. . ++...+. .......+.-... ..+..
T Consensus 91 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 166 (284)
T 3gu3_A 91 DIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQ--RNGKD 166 (284)
T ss_dssp EEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHH--HTCCC
T ss_pred eEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhh--hhccc
Confidence 999999999999885 589999999999999999998761 1 1111110 0001111111111 11333
Q ss_pred ecCHHHHHHHHHhcCCCeeEEEE
Q 038113 78 ERTKHELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~~~ 100 (112)
..+..++.++|++|||+.+++..
T Consensus 167 ~~~~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 167 GNIGMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp TTGGGTHHHHHHHTTCEEEEEEE
T ss_pred ccHHHHHHHHHHHcCCCeEEEEE
Confidence 44667899999999999987743
No 74
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.65 E-value=3.7e-08 Score=66.65 Aligned_cols=89 Identities=12% Similarity=0.058 Sum_probs=58.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchh---hhhcCCCceecCHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVL---MMTQNPGGKERTKHELM 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~rt~~e~~ 85 (112)
|+|++.+++|+++|. .++|+++++.|+|||++++.....+.. ..........+... ..........++.++|.
T Consensus 119 D~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 3ccf_A 119 DAVFSNAMLHWVKEP--EAAIASIHQALKSGGRFVAEFGGKGNI--KYILEALYNALETLGIHNPQALNPWYFPSIGEYV 194 (279)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECTTTT--HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHH
T ss_pred CEEEEcchhhhCcCH--HHHHHHHHHhcCCCcEEEEEecCCcch--HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHH
Confidence 999999999999874 589999999999999999876543221 11000000000000 00000012345899999
Q ss_pred HHHHhcCCCeeEEEEe
Q 038113 86 TLVTGAGFGGIRFESF 101 (112)
Q Consensus 86 ~ll~~aGf~~~~~~~~ 101 (112)
++|+++||+.+++...
T Consensus 195 ~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 195 NILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHTEEEEEEEEE
T ss_pred HHHHHcCCEEEEEEEe
Confidence 9999999999877654
No 75
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.64 E-value=4.3e-08 Score=65.34 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=55.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc--hhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETR--TLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++.+++|+++| ..++|+++++.|+|||++++. ...+ ..... ............-..........+.+++.+
T Consensus 106 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (263)
T 2yqz_A 106 HGVIVVHLWHLVPD--WPKVLAEAIRVLKPGGALLEG-WDQA-EASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEE 181 (263)
T ss_dssp EEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEE-EEEE-CCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred eEEEECCchhhcCC--HHHHHHHHHHHCCCCcEEEEE-ecCC-CccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHH
Confidence 99999999999987 468999999999999999988 2222 11110 000001111100000000123458899999
Q ss_pred HHHhcCCCeeEEEE
Q 038113 87 LVTGAGFGGIRFES 100 (112)
Q Consensus 87 ll~~aGf~~~~~~~ 100 (112)
+|+++||+.+.+..
T Consensus 182 ~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 182 ALRRLGLKPRTREV 195 (263)
T ss_dssp HHHHTTCCCEEEEE
T ss_pred HHHHcCCCcceEEE
Confidence 99999999876543
No 76
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.63 E-value=9.3e-08 Score=62.18 Aligned_cols=74 Identities=7% Similarity=0.022 Sum_probs=55.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+.+.++|++++++..++++++++.|+|||+++++....+..... ......+.+++.+++
T Consensus 103 D~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~------------------~~~~~~~~~el~~~~ 164 (203)
T 1pjz_A 103 AAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLE------------------GPPFSVPQTWLHRVM 164 (203)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSS------------------SCCCCCCHHHHHHTS
T ss_pred EEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccC------------------CCCCCCCHHHHHHHh
Confidence 99999999999998888899999999999999955554333211000 011125789999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
++ ||+++.+...
T Consensus 165 ~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 165 SG-NWEVTKVGGQ 176 (203)
T ss_dssp CS-SEEEEEEEES
T ss_pred cC-CcEEEEeccc
Confidence 98 9998776654
No 77
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.62 E-value=1.7e-07 Score=61.16 Aligned_cols=81 Identities=9% Similarity=-0.002 Sum_probs=52.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHH---
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELM--- 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~--- 85 (112)
|+|++.+++|++++++..++|+++++.|+|||.+++... .+....-+ ........ ........+.+++.
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~-~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~l~~~~ 175 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN-KEYNFHYG------NLFEGNLR-HRDHRFEWTRKEFQTWA 175 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB-GGGGGCCC------CT-----G-GGCCTTSBCHHHHHHHH
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc-hhhhhhhc------ccCccccc-ccCceeeecHHHHHHHH
Confidence 999999999999998889999999999999996555443 21110000 00000000 01122345888888
Q ss_pred -HHHHhcCCCeeE
Q 038113 86 -TLVTGAGFGGIR 97 (112)
Q Consensus 86 -~ll~~aGf~~~~ 97 (112)
++++++||++..
T Consensus 176 ~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 176 VKVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHHTEEEEE
T ss_pred HHHHHHCCcEEEE
Confidence 788899996643
No 78
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.62 E-value=1.7e-07 Score=61.13 Aligned_cols=81 Identities=7% Similarity=-0.004 Sum_probs=53.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHH---
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELM--- 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~--- 85 (112)
|+|++.+++|++++++..++|+++++.|+|||.+++........ .+.. +..............+.+++.
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 175 (217)
T 3jwh_A 104 DAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNV-------KFAN-LPAGKLRHKDHRFEWTRSQFQNWA 175 (217)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHH-------HTC------------CCSCBCHHHHHHHH
T ss_pred CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccch-------hhcc-cccccccccccccccCHHHHHHHH
Confidence 99999999999999888999999999999999766654321000 0000 000000001123346888998
Q ss_pred -HHHHhcCCCeeE
Q 038113 86 -TLVTGAGFGGIR 97 (112)
Q Consensus 86 -~ll~~aGf~~~~ 97 (112)
++++++||+++.
T Consensus 176 ~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 176 NKITERFAYNVQF 188 (217)
T ss_dssp HHHHHHSSEEEEE
T ss_pred HHHHHHcCceEEE
Confidence 888999997743
No 79
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.61 E-value=1.9e-08 Score=68.24 Aligned_cols=93 Identities=11% Similarity=0.035 Sum_probs=60.4
Q ss_pred cEEEecccccc--CChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC--------CCchhh-------h----hhhhhc-
Q 038113 9 DAIYMKWILHD--WSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLP--------ETRTLS-------K----IISQGD- 66 (112)
Q Consensus 9 D~v~~~~vlh~--~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~--------~~~~~~-------~----~~~~~~- 66 (112)
|+|++..++|+ .+.++..++|+++++.|+|||++++..+...... ...... . ....+.
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 214 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRF 214 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEE
Confidence 99999999998 6677789999999999999999999876432100 000000 0 000000
Q ss_pred -hhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 67 -VLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 67 -~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
+............+.+++.++|+++||+++++...
T Consensus 215 ~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 215 TLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp EETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred EEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00000000134568999999999999999988764
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.60 E-value=2.6e-08 Score=66.02 Aligned_cols=89 Identities=15% Similarity=0.098 Sum_probs=59.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhh-----hchh-hhhcCCCceecCH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQ-----GDVL-MMTQNPGGKERTK 81 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~g~~rt~ 81 (112)
.|+|++.+++|++++++..++|+++++.|+|||+++|.+...++.. ........ ..+. ...........+.
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCID---FFNSLLEKYGQLPYELLLVMEHGIRPGIFTA 201 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHH---HHHHHHHHHSSCCHHHHHHHTTTCCCCCCCH
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccH---HHHHHHhCCCCCchhhhhccccCCCCCccCH
Confidence 3899999999999988889999999999999999999998654311 00000000 0000 0000001123689
Q ss_pred HHHHHHHHhcCCCeeEEEEe
Q 038113 82 HELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~ 101 (112)
+++.+++ +||+++....+
T Consensus 202 ~~~~~~~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 202 EDIELYF--PDFEILSQGEG 219 (245)
T ss_dssp HHHHHHC--TTEEEEEEECC
T ss_pred HHHHHHh--CCCEEEecccc
Confidence 9999999 99999876543
No 81
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.54 E-value=1.2e-07 Score=64.84 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=56.4
Q ss_pred EEEeccccccCChHH-HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 10 AIYMKWILHDWSDEH-CLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 10 ~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
++++..+||+++|++ ...+|++++++|+|||.|++.+...+..+. ........+. .. ......||.+|+.++|
T Consensus 163 av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~--~~~~~~~~~~---~~-g~p~~~rs~~ei~~~f 236 (277)
T 3giw_A 163 ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQ--EVGRVAREYA---AR-NMPMRLRTHAEAEEFF 236 (277)
T ss_dssp EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHH--HHHHHHHHHH---HT-TCCCCCCCHHHHHHTT
T ss_pred hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHH--HHHHHHHHHH---hc-CCCCccCCHHHHHHHh
Confidence 688889999999976 689999999999999999999977653221 1111111111 10 1134568999999999
Q ss_pred HhcCCCeeE
Q 038113 89 TGAGFGGIR 97 (112)
Q Consensus 89 ~~aGf~~~~ 97 (112)
. ||+.++
T Consensus 237 ~--Glelve 243 (277)
T 3giw_A 237 E--GLELVE 243 (277)
T ss_dssp T--TSEECT
T ss_pred C--CCcccC
Confidence 4 998664
No 82
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.50 E-value=1.5e-07 Score=62.63 Aligned_cols=86 Identities=7% Similarity=0.015 Sum_probs=54.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhh--hchhhhh-cCCCceecCHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQ--GDVLMMT-QNPGGKERTKHELM 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~rt~~e~~ 85 (112)
|+|++.+++|+++| ..++|+++++.|+|||++++..+.....+........... +...... ........+.++|.
T Consensus 97 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (259)
T 2p35_A 97 DLLYANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYF 174 (259)
T ss_dssp EEEEEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHH
T ss_pred CEEEEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHH
Confidence 99999999999977 4689999999999999999988533221100000000000 0000000 00123456899999
Q ss_pred HHHHhcCCCee
Q 038113 86 TLVTGAGFGGI 96 (112)
Q Consensus 86 ~ll~~aGf~~~ 96 (112)
++|+++||++.
T Consensus 175 ~~l~~aGf~v~ 185 (259)
T 2p35_A 175 NALSPKSSRVD 185 (259)
T ss_dssp HHHGGGEEEEE
T ss_pred HHHHhcCCceE
Confidence 99999999743
No 83
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.45 E-value=5.8e-08 Score=65.95 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=36.7
Q ss_pred cEEEec-cccccCCh-----HHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 9 DAIYMK-WILHDWSD-----EHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 9 D~v~~~-~vlh~~~d-----~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
|+|++. +++|++++ ++..++|+++++.|+|||++++..+.
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999998 89999998 77899999999999999999988653
No 84
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.44 E-value=1.5e-06 Score=55.81 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=54.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++. +++++.++..++|+++++.|+|||++++.+........ ..... ......++.+++.++|
T Consensus 96 D~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~l~~~l 160 (202)
T 2kw5_A 96 EGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY---------NTGGP----KDLDLLPKLETLQSEL 160 (202)
T ss_dssp SEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG---------TSCCS----SSGGGCCCHHHHHHHC
T ss_pred cEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC---------CCCCC----CcceeecCHHHHHHHh
Confidence 999984 34567777899999999999999999998875432210 00000 0122357999999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+ ||+++++...
T Consensus 161 ~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 161 P--SLNWLIANNL 171 (202)
T ss_dssp S--SSCEEEEEEE
T ss_pred c--CceEEEEEEE
Confidence 8 9999887653
No 85
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.35 E-value=7.7e-07 Score=61.42 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=56.9
Q ss_pred cEEEecccccc-CChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC------------CCchhhhhhhh----hch--hh
Q 038113 9 DAIYMKWILHD-WSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLP------------ETRTLSKIISQ----GDV--LM 69 (112)
Q Consensus 9 D~v~~~~vlh~-~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~------------~~~~~~~~~~~----~~~--~~ 69 (112)
|+|++..++|. +++++..++|+++++.|+|||++++..+..+.-. .......+... .+. ..
T Consensus 131 D~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 210 (302)
T 2vdw_A 131 NIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVY 210 (302)
T ss_dssp EEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEB
T ss_pred eEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccccee
Confidence 99999999997 4545568999999999999999988766321100 00000000000 000 00
Q ss_pred hhc--CCC--ceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 70 MTQ--NPG--GKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 70 ~~~--~~~--g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
... ..+ -...+.+++.++++++||+++.....
T Consensus 211 ~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 211 NPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp CTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred eccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 000 001 12457899999999999999887653
No 86
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.32 E-value=1.2e-06 Score=56.59 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=50.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++.+++|++++ ..++|+++++.|+|||++++.+...... ...........-.......+.+|.++++++|
T Consensus 97 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l 169 (211)
T 2gs9_A 97 DVVLLFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEALSP-----WAALYRRLGEKGVLPWAQARFLAREDLKALL 169 (211)
T ss_dssp EEEEEESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTTSH-----HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHH
T ss_pred EEEEEcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCcCc-----HHHHHHHHhhccCccccccccCCHHHHHHHh
Confidence 99999999999986 4689999999999999999988643211 1100000000000001134567999999999
Q ss_pred HhcC
Q 038113 89 TGAG 92 (112)
Q Consensus 89 ~~aG 92 (112)
+ |
T Consensus 170 ~--G 171 (211)
T 2gs9_A 170 G--P 171 (211)
T ss_dssp C--S
T ss_pred c--C
Confidence 8 8
No 87
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.29 E-value=1.3e-06 Score=59.17 Aligned_cols=73 Identities=14% Similarity=0.102 Sum_probs=55.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..++|++++++..++|+++++.|+|||.++++.....+....+ .......+.+++.+++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~ 249 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKEYY 249 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHHHT
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHHHh
Confidence 999999999999998889999999999999999888876654432111 0112345778899998
Q ss_pred HhcCCCeeEEE
Q 038113 89 TGAGFGGIRFE 99 (112)
Q Consensus 89 ~~aGf~~~~~~ 99 (112)
+ +|+.+...
T Consensus 250 ~--~~~~~~~~ 258 (286)
T 3m70_A 250 K--DWEFLEYN 258 (286)
T ss_dssp T--TSEEEEEE
T ss_pred c--CCEEEEEE
Confidence 5 48887664
No 88
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.28 E-value=1.2e-07 Score=64.85 Aligned_cols=85 Identities=13% Similarity=0.214 Sum_probs=54.5
Q ss_pred cEEEeccccccC----ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHH
Q 038113 9 DAIYMKWILHDW----SDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHEL 84 (112)
Q Consensus 9 D~v~~~~vlh~~----~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 84 (112)
|+|++.+++|++ ++++..++|+++++.|+|||++++............... ..... .. .......+++
T Consensus 179 D~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~--~~~~~-~~-----~~~~~~p~~~ 250 (292)
T 3g07_A 179 DVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLT--ETIYK-NY-----YRIQLKPEQF 250 (292)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSC--HHHHH-HH-----HHCCCCGGGH
T ss_pred CEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhccc--HHHHh-hh-----hcEEEcHHHH
Confidence 999999999554 778899999999999999999988543221100000000 00000 00 1122346899
Q ss_pred HHHHHh--cCCCeeEEEEe
Q 038113 85 MTLVTG--AGFGGIRFESF 101 (112)
Q Consensus 85 ~~ll~~--aGf~~~~~~~~ 101 (112)
.++|++ +||+.++++..
T Consensus 251 ~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 251 SSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhcCCCceEEEEecc
Confidence 999999 99998887654
No 89
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.27 E-value=1.1e-06 Score=56.67 Aligned_cols=70 Identities=14% Similarity=-0.030 Sum_probs=57.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++...+|+ ...+++++++.|+|||++++.+.... +.+++.+++
T Consensus 127 D~i~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~~~ 172 (205)
T 3grz_A 127 DLIVANILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------QLPKIEQAL 172 (205)
T ss_dssp EEEEEESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------GHHHHHHHH
T ss_pred eEEEECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCcc-----------------------------cHHHHHHHH
Confidence 99998877765 36899999999999999999654321 366789999
Q ss_pred HhcCCCeeEEEEeCCceEEEEEEC
Q 038113 89 TGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
+++||+.+++....+..+++.-+|
T Consensus 173 ~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 173 AENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp HHTTEEEEEEEEETTEEEEEEEEC
T ss_pred HHcCCceEEeeccCCEEEEEEecc
Confidence 999999999988888888887664
No 90
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.27 E-value=2.2e-06 Score=57.71 Aligned_cols=74 Identities=11% Similarity=-0.052 Sum_probs=56.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+...++|++++++..++++++++.|+|||+++++....+..... ......+.+|+.+++
T Consensus 154 D~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~------------------g~~~~~~~~el~~~l 215 (252)
T 2gb4_A 154 DRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA------------------GPPFYVPSAELKRLF 215 (252)
T ss_dssp EEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCC------------------CSSCCCCHHHHHHHH
T ss_pred EEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCC------------------CCCCCCCHHHHHHHh
Confidence 99999999999998888899999999999999998766543321100 001125789999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+. +|+++.....
T Consensus 216 ~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 216 GT-KCSMQCLEEV 227 (252)
T ss_dssp TT-TEEEEEEEEE
T ss_pred hC-CeEEEEEecc
Confidence 87 5998776543
No 91
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.13 E-value=8.3e-06 Score=53.68 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=53.1
Q ss_pred cEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 9 DAIYMKWILHDWSDE-HCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 9 D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
|+|+ |++++. +...+++++++.|+|||++++. ......+..+.. .....+++. +
T Consensus 145 D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~------------------~~~~~~~l~-~ 199 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDP------------------KEIFKEQKE-I 199 (230)
T ss_dssp EEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCH------------------HHHHHHHHH-H
T ss_pred EEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCH------------------HHhhHHHHH-H
Confidence 8887 666653 3567899999999999999997 322111111100 001236777 9
Q ss_pred HHhcCCCeeEEEEeCCc---eEEEEEEC
Q 038113 88 VTGAGFGGIRFESFICN---LWVMEFYK 112 (112)
Q Consensus 88 l~~aGf~~~~~~~~~~~---~~vie~~~ 112 (112)
|+++||+.++..++.++ +.++.++|
T Consensus 200 l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 200 LEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp HHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred HHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 99999999998887654 67776654
No 92
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.10 E-value=2.5e-05 Score=51.65 Aligned_cols=37 Identities=27% Similarity=0.355 Sum_probs=32.1
Q ss_pred cEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMK-WILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++. ..+|.+++++..++|+++++.|+|||.+++.
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 999876 5677788888899999999999999998764
No 93
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.93 E-value=9.4e-06 Score=55.32 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=49.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-hhhhh-ch-hhhhcCCCceecCHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSK-IISQG-DV-LMMTQNPGGKERTKHELM 85 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~g~~rt~~e~~ 85 (112)
|+|++..++|++ + ..++|+++++.|+|||.+++.+...+.....+.... ..... +- .+... -.....+.+.
T Consensus 115 D~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---w~~p~~~~~~ 188 (299)
T 3g5t_A 115 DMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPY---WEQPGRSRLR 188 (299)
T ss_dssp EEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGG---SCTTHHHHHH
T ss_pred eEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccch---hhchhhHHHH
Confidence 999999999999 4 578999999999999999996554322111111100 00110 00 11100 0013466789
Q ss_pred HHHHhcCCC
Q 038113 86 TLVTGAGFG 94 (112)
Q Consensus 86 ~ll~~aGf~ 94 (112)
++++++||.
T Consensus 189 ~~l~~~gfp 197 (299)
T 3g5t_A 189 NMLKDSHLD 197 (299)
T ss_dssp TTTTTCCCC
T ss_pred HhhhccCCC
Confidence 999999994
No 94
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.93 E-value=6.2e-06 Score=56.30 Aligned_cols=36 Identities=14% Similarity=0.354 Sum_probs=34.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEE
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 44 (112)
|+|+++|+|++++++...+++++++++|+|||.|++
T Consensus 215 DlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 215 DAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred eEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 999999999999998889999999999999999987
No 95
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.93 E-value=8.7e-06 Score=55.86 Aligned_cols=93 Identities=10% Similarity=-0.028 Sum_probs=57.8
Q ss_pred cEEEeccccccC--ChHHHHHHHHHHHhhCCCCCEEEEEeeecCC-------CCCCchhhh-----hhh---------hh
Q 038113 9 DAIYMKWILHDW--SDEHCLKLFKKCYKSIPKDGMVIIVETILPK-------LPETRTLSK-----IIS---------QG 65 (112)
Q Consensus 9 D~v~~~~vlh~~--~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~-------~~~~~~~~~-----~~~---------~~ 65 (112)
|+|++..++|.. +.++...+|+++++.|+|||.+++..+..+. ......... +.. ..
T Consensus 116 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 195 (313)
T 3bgv_A 116 DICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKY 195 (313)
T ss_dssp EEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEE
T ss_pred EEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceE
Confidence 999999999987 3466789999999999999999998763211 000000000 000 00
Q ss_pred chhh-hhcCCCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 66 DVLM-MTQNPGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 66 ~~~~-~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.+.+ ..........+.+++.++++++||+.+.....
T Consensus 196 ~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 196 DFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp EEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred EEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 0000 00000122357899999999999999987653
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.87 E-value=0.00015 Score=45.60 Aligned_cols=69 Identities=10% Similarity=0.168 Sum_probs=52.7
Q ss_pred CCCCcc--cEEEeccccccCChH-------HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcC
Q 038113 3 QNVAKG--DAIYMKWILHDWSDE-------HCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQN 73 (112)
Q Consensus 3 ~~~P~~--D~v~~~~vlh~~~d~-------~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
++++++ |+|++...+|..++. +...+++++.+.+ |||++++.+...
T Consensus 72 ~~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------ 126 (170)
T 3q87_B 72 CSINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------ 126 (170)
T ss_dssp TTBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------
T ss_pred hhcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------
Confidence 445533 999998888866554 4567899999999 999999977311
Q ss_pred CCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 74 PGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 74 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.+.+++.++++++||+.+.+...
T Consensus 127 -----~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 127 -----NRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp -----GCHHHHHHHHHHTTCEEEEEEEE
T ss_pred -----CCHHHHHHHHHHCCCcEEEEEee
Confidence 13568899999999999887765
No 97
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.85 E-value=1.5e-05 Score=51.55 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=35.6
Q ss_pred cEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSD-EHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++.+++|++++ ++..++|+++++.|+|||.+++...
T Consensus 116 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 116 DLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99999999999997 5567999999999999999998765
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.79 E-value=8.4e-05 Score=46.76 Aligned_cols=73 Identities=12% Similarity=0.168 Sum_probs=54.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++...+|. +.++...+++++++.|+|||++++...... ...++.+++
T Consensus 121 D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~~l 170 (194)
T 1dus_A 121 NKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ-----------------------------GAKSLAKYM 170 (194)
T ss_dssp EEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH-----------------------------HHHHHHHHH
T ss_pred eEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC-----------------------------ChHHHHHHH
Confidence 99999888774 455678999999999999999999865321 022466777
Q ss_pred HhcCCCeeEEEEeCCceEEEEEEC
Q 038113 89 TGAGFGGIRFESFICNLWVMEFYK 112 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~vie~~~ 112 (112)
++. |..+++.....+..++.++|
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 171 KDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHH-hcceEEEecCCcEEEEEEee
Confidence 776 66677777767777777765
No 99
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.78 E-value=1.8e-05 Score=53.38 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=36.2
Q ss_pred CCCcc--cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 4 NVAKG--DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 4 ~~P~~--D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
++|++ |+|++..++|.++. .+.++++++.|+|||+++++....+
T Consensus 94 ~~~~~sfD~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 94 GLPPASVDVAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCSSCEEEEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccCCcccEEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 34554 99999999987764 3689999999999999999887543
No 100
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.74 E-value=4.6e-05 Score=50.88 Aligned_cols=78 Identities=8% Similarity=0.035 Sum_probs=48.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+++.. +++. ++...+++++++.|||||+++|.......+...+. + ...++-.+.|
T Consensus 149 DvVf~d--~~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~-------------------~-~~~~~ev~~L 204 (233)
T 4df3_A 149 DGLYAD--VAQP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEP-------------------S-EVYKREIKTL 204 (233)
T ss_dssp EEEEEC--CCCT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCC-------------------C-HHHHHHHHHH
T ss_pred EEEEEe--ccCC--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCCh-------------------H-HHHHHHHHHH
Confidence 777643 2222 23568999999999999999997532221111100 0 0123345678
Q ss_pred HhcCCCeeEEEEeCC---ceEEEEE
Q 038113 89 TGAGFGGIRFESFIC---NLWVMEF 110 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~---~~~vie~ 110 (112)
+++||+.++...+.+ .+.++-+
T Consensus 205 ~~~GF~l~e~i~L~pf~~~H~lv~~ 229 (233)
T 4df3_A 205 MDGGLEIKDVVHLDPFDRDHAMIYA 229 (233)
T ss_dssp HHTTCCEEEEEECTTTSTTEEEEEE
T ss_pred HHCCCEEEEEEccCCCCCceEEEEE
Confidence 899999999988755 3555544
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.72 E-value=4.8e-06 Score=54.94 Aligned_cols=45 Identities=11% Similarity=0.319 Sum_probs=34.4
Q ss_pred CCCcc--cEEEe-ccc--cccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 4 NVAKG--DAIYM-KWI--LHDWSDEHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 4 ~~P~~--D~v~~-~~v--lh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
++|++ |+|++ .+. .+++..++...+++++++.|+|||++++++..
T Consensus 123 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 45543 99988 554 45555555678999999999999999988754
No 102
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.68 E-value=0.00015 Score=47.35 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=51.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++... ..++...+++++++.|+|||++++. .........++ ....+.+++.++
T Consensus 145 D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~------------------~~~~~~~~l~~l- 200 (227)
T 1g8a_A 145 DVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKE------------------PEQVFREVEREL- 200 (227)
T ss_dssp EEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSC------------------HHHHHHHHHHHH-
T ss_pred eEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCC------------------hhhhhHHHHHHH-
Confidence 99985433 2333456699999999999999998 32221111110 011236677777
Q ss_pred HhcCCCeeEEEEeCCc---eEEEEEEC
Q 038113 89 TGAGFGGIRFESFICN---LWVMEFYK 112 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~---~~vie~~~ 112 (112)
+++ |+.++...+.++ +.++.++|
T Consensus 201 ~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 201 SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 777 999998887655 66776654
No 103
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.67 E-value=0.00026 Score=47.74 Aligned_cols=60 Identities=8% Similarity=0.014 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEe-
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESF- 101 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~- 101 (112)
+...++++++.+.|+|||++++.. + ..+.+++.++++++||+.+++...
T Consensus 215 ~~~~~~l~~~~~~LkpgG~l~~~~--------~----------------------~~~~~~~~~~l~~~Gf~~v~~~~d~ 264 (276)
T 2b3t_A 215 ADIVHIIEQSRNALVSGGFLLLEH--------G----------------------WQQGEAVRQAFILAGYHDVETCRDY 264 (276)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEC--------C----------------------SSCHHHHHHHHHHTTCTTCCEEECT
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEE--------C----------------------chHHHHHHHHHHHCCCcEEEEEecC
Confidence 345789999999999999998841 0 014678899999999998877654
Q ss_pred CCceEEEEEEC
Q 038113 102 ICNLWVMEFYK 112 (112)
Q Consensus 102 ~~~~~vie~~~ 112 (112)
.+...++.+++
T Consensus 265 ~g~~r~~~~~~ 275 (276)
T 2b3t_A 265 GDNERVTLGRY 275 (276)
T ss_dssp TSSEEEEEEEC
T ss_pred CCCCcEEEEEE
Confidence 55566666653
No 104
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.60 E-value=0.00021 Score=46.53 Aligned_cols=81 Identities=14% Similarity=0.145 Sum_probs=51.0
Q ss_pred CCCCcc--cEEEeccccccCChHH-----------------HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhh
Q 038113 3 QNVAKG--DAIYMKWILHDWSDEH-----------------CLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIIS 63 (112)
Q Consensus 3 ~~~P~~--D~v~~~~vlh~~~d~~-----------------~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~ 63 (112)
+++|++ |+|++.-.+|..++.+ ..++++++.+.|+|||++++.-.. . .
T Consensus 117 ~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~---~------- 183 (230)
T 3evz_A 117 KGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---K---E------- 183 (230)
T ss_dssp TTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES---C---H-------
T ss_pred hhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc---c---H-------
Confidence 345533 9999876666544422 378999999999999999986211 0 0
Q ss_pred hhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEeCC--ceEEEEEE
Q 038113 64 QGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESFIC--NLWVMEFY 111 (112)
Q Consensus 64 ~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~--~~~vie~~ 111 (112)
.+.+++.++++++||+...+....+ ...++.+.
T Consensus 184 ---------------~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~ 218 (230)
T 3evz_A 184 ---------------KLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFF 218 (230)
T ss_dssp ---------------HHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEE
T ss_pred ---------------hHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEe
Confidence 1256888999999997766544433 24444443
No 105
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.57 E-value=0.00036 Score=44.72 Aligned_cols=56 Identities=9% Similarity=0.235 Sum_probs=42.5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|++++...++ +..++++++.+.|+|||++++..... .+.+++.++
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~ 154 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL-----------------------------DTLTKAVEF 154 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH-----------------------------HHHHHHHHH
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc-----------------------------ccHHHHHHH
Confidence 49999988876 34689999999999999999854321 135577888
Q ss_pred HHhcCCCeeEE
Q 038113 88 VTGAGFGGIRF 98 (112)
Q Consensus 88 l~~aGf~~~~~ 98 (112)
++++|| .+++
T Consensus 155 l~~~g~-~~~~ 164 (204)
T 3e05_A 155 LEDHGY-MVEV 164 (204)
T ss_dssp HHHTTC-EEEE
T ss_pred HHHCCC-ceeE
Confidence 999998 4443
No 106
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.53 E-value=0.00012 Score=50.45 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=50.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|++++..++|++ ..+|+++++.|+|||+++++ +.|.-..++. ..+..-.+-...-..++.+++.++
T Consensus 152 fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l--vkPqfe~~~~------~~~~~G~vrd~~~~~~~~~~v~~~ 218 (291)
T 3hp7_A 152 PSFASIDVSFISL-----NLILPALAKILVDGGQVVAL--VKPQFEAGRE------QIGKNGIVRESSIHEKVLETVTAF 218 (291)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE--ECGGGTSCGG------GCC-CCCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE--ECcccccChh------hcCCCCccCCHHHHHHHHHHHHHH
Confidence 3999888888765 56999999999999999996 2222111110 010000000000122367899999
Q ss_pred HHhcCCCeeEEEEe
Q 038113 88 VTGAGFGGIRFESF 101 (112)
Q Consensus 88 l~~aGf~~~~~~~~ 101 (112)
++++||+...+..-
T Consensus 219 ~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 219 AVDYGFSVKGLDFS 232 (291)
T ss_dssp HHHTTEEEEEEEEC
T ss_pred HHHCCCEEEEEEEC
Confidence 99999998877653
No 107
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.53 E-value=0.00011 Score=49.77 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=35.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++..++|+++.++....++++++.| |||++++.-.
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999999999999988999999999999 9999998754
No 108
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.52 E-value=0.00011 Score=48.14 Aligned_cols=79 Identities=9% Similarity=-0.017 Sum_probs=49.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++... ..++...+++++++.|+|||++++ ............. ..+-..+ .++|
T Consensus 149 D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i-~~~~~~~~~~~~~------------------~~~~~~~-~~~l 204 (233)
T 2ipx_A 149 DVIFADVA----QPDQTRIVALNAHTFLRNGGHFVI-SIKANCIDSTASA------------------EAVFASE-VKKM 204 (233)
T ss_dssp EEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEE-EEEHHHHCSSSCH------------------HHHHHHH-HHTT
T ss_pred EEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEE-EEcccccccCCCH------------------HHHHHHH-HHHH
Confidence 99987433 334456789999999999999999 3322110000000 0001123 5899
Q ss_pred HhcCCCeeEEEEeCCc---eEEEEEE
Q 038113 89 TGAGFGGIRFESFICN---LWVMEFY 111 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~---~~vie~~ 111 (112)
+++||+.++...+.++ +.++.++
T Consensus 205 ~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 205 QQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp GGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred HHCCCceEEEEecCCccCCcEEEEEE
Confidence 9999999998776543 6666554
No 109
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.46 E-value=0.00032 Score=46.92 Aligned_cols=65 Identities=11% Similarity=0.087 Sum_probs=49.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+.....| ....+++++++.|+|||++++.+.... +.+++.+++
T Consensus 186 D~Vv~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------~~~~v~~~l 231 (254)
T 2nxc_A 186 DLLVANLYAE-----LHAALAPRYREALVPGGRALLTGILKD-----------------------------RAPLVREAM 231 (254)
T ss_dssp EEEEEECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------GHHHHHHHH
T ss_pred CEEEECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------CHHHHHHHH
Confidence 9998754433 357899999999999999999654221 256889999
Q ss_pred HhcCCCeeEEEEeCCceEE
Q 038113 89 TGAGFGGIRFESFICNLWV 107 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~~~v 107 (112)
+++||+.+++....+..++
T Consensus 232 ~~~Gf~~~~~~~~~~W~~l 250 (254)
T 2nxc_A 232 AGAGFRPLEEAAEGEWVLL 250 (254)
T ss_dssp HHTTCEEEEEEEETTEEEE
T ss_pred HHCCCEEEEEeccCCeEEE
Confidence 9999999988877655544
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.40 E-value=0.0016 Score=50.85 Aligned_cols=92 Identities=10% Similarity=0.039 Sum_probs=55.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCC-----CchhhhhhhhhchhhhhcCCCceecCHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPE-----TRTLSKIISQGDVLMMTQNPGGKERTKHE 83 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~rt~~e 83 (112)
|+|++..++|++++++...+++++++.|+|| .++|..+..+.... ...............+........++.++
T Consensus 798 DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReE 876 (950)
T 3htx_A 798 DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQ 876 (950)
T ss_dssp CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHH
T ss_pred eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHH
Confidence 9999999999999998889999999999999 77776544321100 00000000000000111112344578888
Q ss_pred HHH----HHHhcCCCeeEEEEeC
Q 038113 84 LMT----LVTGAGFGGIRFESFI 102 (112)
Q Consensus 84 ~~~----ll~~aGf~~~~~~~~~ 102 (112)
++. +.++.||++ ++..++
T Consensus 877 Fr~Wae~LAer~GYsV-efvGVG 898 (950)
T 3htx_A 877 FNQWASKLGKRHNYSV-EFSGVG 898 (950)
T ss_dssp HHHHHHHHHHHTTEEE-EEEEES
T ss_pred HHHHHHHHHHhcCcEE-EEEccC
Confidence 888 555669865 556654
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.37 E-value=5.7e-06 Score=54.89 Aligned_cols=73 Identities=10% Similarity=-0.036 Sum_probs=44.5
Q ss_pred cEEEe-----ccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHH
Q 038113 9 DAIYM-----KWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHE 83 (112)
Q Consensus 9 D~v~~-----~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e 83 (112)
|.+++ ...++++++ ...+++++++.|||||++++.+........ ...++ +-.....+.
T Consensus 130 D~i~~D~~~~~~~~~~~~~--~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~-------~~~~~--------~~~~~~~~~ 192 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQ--FNFIKNHAFRLLKPGGVLTYCNLTSWGELM-------KSKYS--------DITIMFEET 192 (236)
T ss_dssp EEEEECCCCCBGGGTTTHH--HHHHHHTHHHHEEEEEEEEECCHHHHHHHT-------TTTCS--------CHHHHHHHH
T ss_pred ceEEEeeeecccchhhhcc--hhhhhhhhhheeCCCCEEEEEecCCchhhh-------hhhhh--------hhhhhhHHH
Confidence 66653 555666655 578999999999999999876532211100 00000 111123456
Q ss_pred HHHHHHhcCCCeeEE
Q 038113 84 LMTLVTGAGFGGIRF 98 (112)
Q Consensus 84 ~~~ll~~aGf~~~~~ 98 (112)
+...|.++||+.+.+
T Consensus 193 ~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 193 QVPALLEAGFRRENI 207 (236)
T ss_dssp THHHHHHHTCCGGGE
T ss_pred HHHHHHHcCCeEEEE
Confidence 777888999997654
No 112
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.34 E-value=7.9e-05 Score=47.78 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=34.7
Q ss_pred cEEEeccccccCC-------------hHHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 9 DAIYMKWILHDWS-------------DEHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 9 D~v~~~~vlh~~~-------------d~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
|+|+...++|++. .++..++|+++++.|+|||++++.++.
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 9999999888765 445789999999999999999998854
No 113
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.31 E-value=0.00047 Score=45.38 Aligned_cols=85 Identities=11% Similarity=0.068 Sum_probs=45.6
Q ss_pred cEEEeccccccCChHH------HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHH
Q 038113 9 DAIYMKWILHDWSDEH------CLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKH 82 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~------~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~ 82 (112)
|.+....+.+.|+... ...+|+++++.|+|||++++.....+.....+ .. ...... . .......+
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~-~~----~~~~~~---~-~~~~~~~~ 166 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAE-IK----KRGLPL---L-SKAYFLSE 166 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC----------------------C-CHHHHHSH
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhch-hh----hcCCCC---C-ChhhcchH
Confidence 5555444444444321 13689999999999999999554333211100 00 000000 0 00011223
Q ss_pred HHHHHHHhcCCCeeEEEEeC
Q 038113 83 ELMTLVTGAGFGGIRFESFI 102 (112)
Q Consensus 83 e~~~ll~~aGf~~~~~~~~~ 102 (112)
++.++++++||++..+...+
T Consensus 167 el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 167 QYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHcCCCeeeeeecC
Confidence 69999999999998876553
No 114
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.31 E-value=0.00077 Score=44.85 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=47.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|+|++.... + ++...+++++++.|+|||++++.-.....+... +-. -..++..+.
T Consensus 147 ~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~-------------------~~~-e~~~~~~~~ 202 (232)
T 3id6_C 147 VDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK-------------------DPK-EIYKTEVEK 202 (232)
T ss_dssp EEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC-------C-------------------CSS-SSTTHHHHH
T ss_pred eEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCC-------------------CHH-HHHHHHHHH
Confidence 3988765332 2 334455667777999999999973111100000 000 012244567
Q ss_pred HHhcCCCeeEEEEeCCc---eEEEEEEC
Q 038113 88 VTGAGFGGIRFESFICN---LWVMEFYK 112 (112)
Q Consensus 88 l~~aGf~~~~~~~~~~~---~~vie~~~ 112 (112)
|+++||+..+...+.++ +.++.+++
T Consensus 203 L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 203 LENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp HHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred HHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 77899999999988554 66666653
No 115
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.30 E-value=0.00057 Score=46.96 Aligned_cols=68 Identities=9% Similarity=0.129 Sum_probs=44.9
Q ss_pred cEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHC--LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++....+.+++... .+++++++++|+|||.+++... .+. . . ..+..++.+
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~----------~---------~--~~~~~~~~~ 225 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE----SIW----------L---------D--LELIEKMSR 225 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC----CTT----------T---------C--HHHHHHHHH
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC----Ccc----------c---------c--hHHHHHHHH
Confidence 99998776666554332 5899999999999999988631 110 0 0 124668899
Q ss_pred HHHhcCCCeeEEEEe
Q 038113 87 LVTGAGFGGIRFESF 101 (112)
Q Consensus 87 ll~~aGf~~~~~~~~ 101 (112)
.++++||..++....
T Consensus 226 ~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 226 FIRETGFASVQYALM 240 (304)
T ss_dssp HHHHHTCSEEEEEEC
T ss_pred HHHhCCCCcEEEEEe
Confidence 999999998887654
No 116
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.23 E-value=0.0029 Score=44.97 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=59.1
Q ss_pred CCCcc--cEEEeccccccCChH------------------------------------HHHHHHHHHHhhCCCCCEEEEE
Q 038113 4 NVAKG--DAIYMKWILHDWSDE------------------------------------HCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 4 ~~P~~--D~v~~~~vlh~~~d~------------------------------------~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
.+|+. |+++.+++||-+++. +-..+|+..++.|+|||++++.
T Consensus 145 lfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 145 LFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp CSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45764 999999999987721 3455799999999999999987
Q ss_pred eeecCCCCCCchhhhhhhhh-ch---h--hhhc------------CCCceecCHHHHHHHHH-hcCCCeeEEEE
Q 038113 46 ETILPKLPETRTLSKIISQG-DV---L--MMTQ------------NPGGKERTKHELMTLVT-GAGFGGIRFES 100 (112)
Q Consensus 46 e~~~~~~~~~~~~~~~~~~~-~~---~--~~~~------------~~~g~~rt~~e~~~ll~-~aGf~~~~~~~ 100 (112)
-.-.++........ ....+ +. . -++. ...-..+|.+|++++++ +.||++..+..
T Consensus 225 ~~gr~~~~~~~~~~-~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~ 297 (374)
T 3b5i_A 225 CLGRTSVDPTDQGG-AGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVV 297 (374)
T ss_dssp EEECCCSSTTCCHH-HHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred EecCCCCccccccc-hhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEE
Confidence 76554321000000 00001 10 0 0100 00123469999999998 59999887654
No 117
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.21 E-value=0.00012 Score=48.84 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=33.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++.++++++.++ ..++|+++++.|+|||++++.....
T Consensus 116 D~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 116 EAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999998876666433 6799999999999999999987643
No 118
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.18 E-value=0.00081 Score=42.89 Aligned_cols=56 Identities=9% Similarity=-0.081 Sum_probs=39.1
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHH--hcCCCeeEEEEeC-
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVT--GAGFGGIRFESFI- 102 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~~- 102 (112)
..+++++++.|+|||++++++... ...+++.++++ ++||..+++....
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~ 194 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGH-----------------------------NQADEVARLFAPWRERGFRVRKVKDLR 194 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTT-----------------------------SCHHHHHHHTGGGGGGTEECCEEECTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEECC-----------------------------ccHHHHHHHHHHhhcCCceEEEEEecC
Confidence 789999999999999966665310 12456778888 8899888777653
Q ss_pred CceEEEEE
Q 038113 103 CNLWVMEF 110 (112)
Q Consensus 103 ~~~~vie~ 110 (112)
+...++.+
T Consensus 195 ~~~r~~~~ 202 (215)
T 4dzr_A 195 GIDRVIAV 202 (215)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 33444443
No 119
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.18 E-value=0.00056 Score=42.81 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=41.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|+|++..++|++ ..+++++.+.|+|||++++..... .+..++.++
T Consensus 101 ~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~~~~~~~~ 146 (192)
T 1l3i_A 101 IDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAILL-----------------------------ETKFEAMEC 146 (192)
T ss_dssp EEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECBH-----------------------------HHHHHHHHH
T ss_pred CCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecCc-----------------------------chHHHHHHH
Confidence 3999998887643 679999999999999999865311 024577888
Q ss_pred HHhcCCCe
Q 038113 88 VTGAGFGG 95 (112)
Q Consensus 88 l~~aGf~~ 95 (112)
+++.||..
T Consensus 147 l~~~g~~~ 154 (192)
T 1l3i_A 147 LRDLGFDV 154 (192)
T ss_dssp HHHTTCCC
T ss_pred HHHCCCce
Confidence 99999954
No 120
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.06 E-value=0.0028 Score=41.13 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=46.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHH----
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHEL---- 84 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~---- 84 (112)
|+|++. +.+ .++...+++++++.|+|||++++.-...+. +. . .+.+++
T Consensus 128 D~V~~~-~~~---~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~--------------~~-----~-----~~~~~~~~~~ 179 (210)
T 1nt2_A 128 DLIYQD-IAQ---KNQIEILKANAEFFLKEKGEVVIMVKARSI--------------DS-----T-----AEPEEVFKSV 179 (210)
T ss_dssp EEEEEC-CCS---TTHHHHHHHHHHHHEEEEEEEEEEEEHHHH--------------CT-----T-----SCHHHHHHHH
T ss_pred eEEEEe-ccC---hhHHHHHHHHHHHHhCCCCEEEEEEecCCc--------------cc-----c-----CCHHHHHHHH
Confidence 999875 332 234556799999999999999998321100 00 0 112222
Q ss_pred HHHHHhcCCCeeEEEEeCC---ceEEEEEEC
Q 038113 85 MTLVTGAGFGGIRFESFIC---NLWVMEFYK 112 (112)
Q Consensus 85 ~~ll~~aGf~~~~~~~~~~---~~~vie~~~ 112 (112)
.+.|+++ |+.++.....+ .+.++.+++
T Consensus 180 ~~~l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 180 LKEMEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HHHHHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred HHHHHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 1237888 99999988743 556776653
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.03 E-value=0.00068 Score=49.01 Aligned_cols=44 Identities=9% Similarity=0.153 Sum_probs=35.8
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLP 53 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~ 53 (112)
.+|+|++.++++ + ++....|+++++.|+|||++++.|.+.+++.
T Consensus 252 ~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 252 NTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp TCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred CccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 359999888774 3 3456778999999999999999999888754
No 122
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.99 E-value=0.00056 Score=45.36 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=40.2
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.++|+++++.|+|||++++.- .+...... ...+-.-..-......++.+++.++++++||++..+...
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~~--~p~~e~~~------~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAALI--KPQFEAGR------EQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEEE--CHHHHSCH------HHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHHhccCCCEEEEEE--CcccccCH------HHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 579999999999999999852 11100000 000000000000112237889999999999999887643
No 123
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.98 E-value=0.00043 Score=48.24 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=34.4
Q ss_pred cEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHD---WSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++...+|+ ++.+...++++++++.|+|||+++++..
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 99999999986 3456678999999999999999999865
No 124
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.95 E-value=0.015 Score=41.13 Aligned_cols=97 Identities=8% Similarity=-0.045 Sum_probs=57.6
Q ss_pred CCCCcc--cEEEeccccccCChH-------------------------------HHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 3 QNVAKG--DAIYMKWILHDWSDE-------------------------------HCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 3 ~~~P~~--D~v~~~~vlh~~~d~-------------------------------~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
..+|.. |+++.++.||=+++. +-..+|+..++.|+|||++++.-.-.
T Consensus 133 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 356765 999999999966541 23456999999999999998876655
Q ss_pred CCCCC-C----chhhhhh-hhhchhhhh---------cCCCceecCHHHHHHHHHhcCC-CeeEEE
Q 038113 50 PKLPE-T----RTLSKII-SQGDVLMMT---------QNPGGKERTKHELMTLVTGAGF-GGIRFE 99 (112)
Q Consensus 50 ~~~~~-~----~~~~~~~-~~~~~~~~~---------~~~~g~~rt~~e~~~ll~~aGf-~~~~~~ 99 (112)
++... . ...+... .+.++..-. ....-..++.+|++++++++|. ++..+.
T Consensus 213 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 213 RSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp SSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 44310 0 0011111 111110000 0011234689999999999965 665543
No 125
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.87 E-value=0.0017 Score=42.28 Aligned_cols=71 Identities=8% Similarity=-0.018 Sum_probs=47.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe--eecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE--TILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
|+|++.++||.+ ++ ....+.+++++|+|||.++-.+ .+.+.++.. ...-.+.|++
T Consensus 117 DvVLa~k~LHlL-~~-~~~al~~v~~~L~pggvfISfptksl~Gr~~gm---------------------~~~Y~~~~~~ 173 (200)
T 3fzg_A 117 DVVFLLKMLPVL-KQ-QDVNILDFLQLFHTQNFVISFPIKSLSGKEKGM---------------------EENYQLWFES 173 (200)
T ss_dssp EEEEEETCHHHH-HH-TTCCHHHHHHTCEEEEEEEEEECCCCC--CTTC---------------------CCCHHHHHHH
T ss_pred ChhhHhhHHHhh-hh-hHHHHHHHHHHhCCCCEEEEeChHHhcCCCcch---------------------hhhHHHHHHH
Confidence 999999999999 43 3556669999999999988887 333332210 1122446666
Q ss_pred HHHhcCCCeeEEEEeCC
Q 038113 87 LVTGAGFGGIRFESFIC 103 (112)
Q Consensus 87 ll~~aGf~~~~~~~~~~ 103 (112)
.+ ...+..++...+++
T Consensus 174 ~~-~~~~~~~~~~~~~n 189 (200)
T 3fzg_A 174 FT-KGWIKILDSKVIGN 189 (200)
T ss_dssp HT-TTTSCEEEEEEETT
T ss_pred hc-cCcceeeeeeeeCc
Confidence 66 56667777776654
No 126
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.81 E-value=3e-05 Score=51.54 Aligned_cols=84 Identities=11% Similarity=-0.012 Sum_probs=46.9
Q ss_pred cEEEeccccccCCh-------------HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCC
Q 038113 9 DAIYMKWILHDWSD-------------EHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPG 75 (112)
Q Consensus 9 D~v~~~~vlh~~~d-------------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
|+|++.-.+|...+ +....+++++++.|+|||++.+++.+..... .......... ...
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~--------~~l~~~g~~~-~~~ 212 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL--------QLKKRLRWYS-CML 212 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH--------HHGGGBSCEE-EEE
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH--------hcccceEEEE-ECC
Confidence 99988755554431 1124678899999999999988875443210 0000011111 112
Q ss_pred ceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 76 GKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 76 g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
+...+.+++.++|+++||+.+++...
T Consensus 213 ~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp SSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred CChhHHHHHHHHHHHcCCCceEEEEE
Confidence 33445689999999999999887766
No 127
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.80 E-value=0.0014 Score=44.77 Aligned_cols=73 Identities=7% Similarity=-0.029 Sum_probs=51.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee--ecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET--ILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELM 85 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 85 (112)
+|++++.-++|++.+++....+ ++.++|+|+|.++-.+. +.+.++.. + ..-.++|.
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm----------~-----------~~Y~~~~e 256 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGM----------F-----------QNYSQSFE 256 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CH----------H-----------HHHHHHHH
T ss_pred cchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcch----------h-----------hHHHHHHH
Confidence 4999999999999998877788 99999999999988887 44433221 0 11256899
Q ss_pred HHHHhcCCCeeEEEEeCC
Q 038113 86 TLVTGAGFGGIRFESFIC 103 (112)
Q Consensus 86 ~ll~~aGf~~~~~~~~~~ 103 (112)
+.+.+.|.. ++...+++
T Consensus 257 ~~~~~~g~~-~~~~~~~n 273 (281)
T 3lcv_B 257 SQARERSCR-IQRLEIGN 273 (281)
T ss_dssp HHHHHHTCC-EEEEEETT
T ss_pred HHHHhcCCc-eeeeeecC
Confidence 999999974 44455543
No 128
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.75 E-value=0.00015 Score=47.41 Aligned_cols=54 Identities=11% Similarity=0.101 Sum_probs=38.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+.. . +..++|+++++.|+|||+++.. + ...+.+++.+++
T Consensus 113 D~v~~~------~--~~~~~l~~~~~~LkpgG~l~~~-----------------------------~-~~~~~~~~~~~l 154 (226)
T 3m33_A 113 GLIVSR------R--GPTSVILRLPELAAPDAHFLYV-----------------------------G-PRLNVPEVPERL 154 (226)
T ss_dssp EEEEEE------S--CCSGGGGGHHHHEEEEEEEEEE-----------------------------E-SSSCCTHHHHHH
T ss_pred EEEEeC------C--CHHHHHHHHHHHcCCCcEEEEe-----------------------------C-CcCCHHHHHHHH
Confidence 999876 1 2357899999999999999800 0 012345788888
Q ss_pred HhcCCCeeEEEE
Q 038113 89 TGAGFGGIRFES 100 (112)
Q Consensus 89 ~~aGf~~~~~~~ 100 (112)
+++||+..++..
T Consensus 155 ~~~Gf~~~~~~~ 166 (226)
T 3m33_A 155 AAVGWDIVAEDH 166 (226)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHCCCeEEEEEe
Confidence 888888876654
No 129
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.73 E-value=0.0012 Score=42.60 Aligned_cols=65 Identities=8% Similarity=0.053 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
..+|+++++.|+|||++++.-....-.+..+. ..+. ......+..+++.++++++||++.++..+
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 120 PEMLRGMAAVCRPGASFLVALNLHAWRPSVPE------VGEH-----PEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGG------GTTC-----CCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeccccccccccc------cccC-----CccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 68999999999999999994332211111110 0000 00111223456889999999999887654
No 130
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.72 E-value=0.0069 Score=43.19 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=56.4
Q ss_pred CCCCcc--cEEEeccccccCChHH-------------------------H------------HHHHHHHHhhCCCCCEEE
Q 038113 3 QNVAKG--DAIYMKWILHDWSDEH-------------------------C------------LKLFKKCYKSIPKDGMVI 43 (112)
Q Consensus 3 ~~~P~~--D~v~~~~vlh~~~d~~-------------------------~------------~~iL~~~~~aL~pgg~l~ 43 (112)
..+|.. |+++.+++||=+++.. + ..+|+..++.|+|||+++
T Consensus 143 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mv 222 (384)
T 2efj_A 143 RLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRML 222 (384)
T ss_dssp CCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEE
Confidence 346765 9999999999655421 2 123788899999999999
Q ss_pred EEeeecCCCC-CCchhhhh-hhhhchhhh---------hcCCCceecCHHHHHHHHHhcC-CCeeEEE
Q 038113 44 IVETILPKLP-ETRTLSKI-ISQGDVLMM---------TQNPGGKERTKHELMTLVTGAG-FGGIRFE 99 (112)
Q Consensus 44 i~e~~~~~~~-~~~~~~~~-~~~~~~~~~---------~~~~~g~~rt~~e~~~ll~~aG-f~~~~~~ 99 (112)
+.-.-.++.. .+...... ..+.++.-- .....-..++.+|++++++++| |++..+.
T Consensus 223 l~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 223 LTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp EEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred EEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 8766544320 11100001 111111000 0000123469999999999985 7777654
No 131
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.69 E-value=0.0016 Score=40.43 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=29.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
.|+|++...+|+ ..+++++++.|+|||++++.+.
T Consensus 95 ~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 95 PDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 399999999987 4799999999999999998764
No 132
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.68 E-value=0.0095 Score=39.58 Aligned_cols=59 Identities=10% Similarity=0.066 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEeC-
Q 038113 24 HCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESFI- 102 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~- 102 (112)
....+++.+.+.|+|||+++++- +. ....++.+++++.||...++..+.
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~~~---~~---------------------------~~~~~~~~~l~~~~~~~~~~~~v~~ 203 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANFVH---RP---------------------------ERLLDIIDIMRKYRLEPKRIQFVHP 203 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE---CT---------------------------TTHHHHHHHHHHTTEEEEEEEEEES
T ss_pred CHHHHHHHHHHHccCCcEEEEEE---cH---------------------------HHHHHHHHHHHHCCCceEEEEEeec
Confidence 35679999999999999999842 11 124567888888999888776652
Q ss_pred -----CceEEEEEEC
Q 038113 103 -----CNLWVMEFYK 112 (112)
Q Consensus 103 -----~~~~vie~~~ 112 (112)
....+++++|
T Consensus 204 ~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 204 RSDREANTVLVEGIK 218 (259)
T ss_dssp STTSCCSEEEEEEEE
T ss_pred CCCCCcEEEEEEEEe
Confidence 2466777654
No 133
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.55 E-value=0.011 Score=41.29 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=56.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-hhhh----hchhhhhcCCCceecCHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSK-IISQ----GDVLMMTQNPGGKERTKHE 83 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~g~~rt~~e 83 (112)
.+++.--+|+.++.+++.++|+.+.+.. |+|.+++.|.+.+..+..+ ..+ .... .+..+ ..-..-.|.++
T Consensus 196 tl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~-fg~~m~~~l~~~rg~~l---~~~~~y~s~~~ 270 (334)
T 1rjd_A 196 TIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDR-FGAIMQSNLKESRNLEM---PTLMTYNSKEK 270 (334)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCC-HHHHHHHHHHHHHCCCC---TTTTTTCSHHH
T ss_pred EEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcch-HHHHHHHHhhcccCCcc---cccccCCCHHH
Confidence 7888889999999999999999999977 7888889999887332222 111 1000 11111 10112358899
Q ss_pred HHHHHHhcCCC
Q 038113 84 LMTLVTGAGFG 94 (112)
Q Consensus 84 ~~~ll~~aGf~ 94 (112)
..+.|.++||+
T Consensus 271 ~~~rl~~~Gf~ 281 (334)
T 1rjd_A 271 YASRWSAAPNV 281 (334)
T ss_dssp HHGGGTTSSEE
T ss_pred HHHHHHHCCCC
Confidence 99999999997
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.51 E-value=0.0024 Score=40.48 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=30.4
Q ss_pred cEEEeccccc-------cCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILH-------DWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh-------~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++...+. ....++..++++++.+.|+|||++++.....
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 9998776551 1123345679999999999999999987543
No 135
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.43 E-value=0.0033 Score=45.51 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=34.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
.|+|++.++++ . ++....|+++.+.|+|||++++.+...+..
T Consensus 324 FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 324 CDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp CSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred CCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 49999887773 2 345678899999999999999998777654
No 136
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.39 E-value=0.0068 Score=40.00 Aligned_cols=39 Identities=8% Similarity=0.268 Sum_probs=31.6
Q ss_pred cEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSD-------EHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++...++...+ +....+++++++.|+|||++++++.
T Consensus 170 D~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 170 DVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp SEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred eEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 99998876655443 5578999999999999999998544
No 137
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.37 E-value=0.02 Score=40.02 Aligned_cols=89 Identities=10% Similarity=0.029 Sum_probs=57.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
-+++.--+|..++.+++.++|+.+.+..+ +|.+++.|++.+.++.+..........+..+.. -..-.|.++..++|
T Consensus 193 tl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl~s---l~~y~t~~~~~~r~ 268 (334)
T 3iei_A 193 TLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDRFGQIMIENLRRRQCDLAG---VETCKSLESQKERL 268 (334)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSHHHHHHHHHHHTTTCCCTT---GGGGGCHHHHHHHH
T ss_pred EEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCHHHHHHHHHHHHhCCCCcc---cccCCCHHHHHHHH
Confidence 47777789999999999999999998765 556667898865432110000000011111110 01224788999999
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
.++||+.+++..+
T Consensus 269 ~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 269 LSNGWETASAVDM 281 (334)
T ss_dssp HTTTCSEEEEEEH
T ss_pred HHcCCCcceeecH
Confidence 9999999877654
No 138
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.36 E-value=0.0012 Score=56.51 Aligned_cols=82 Identities=10% Similarity=0.094 Sum_probs=31.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+.+++||.-++ ..+.|+++++.|+|||++++.+...+.. .+.. ...+...- ..++...+.++|.++|
T Consensus 1313 dlvia~~vl~~t~~--~~~~l~~~~~lL~p~G~l~~~e~~~~~~-~g~~----~~~~~~~~---r~~~~~~~~~~w~~~l 1382 (2512)
T 2vz8_A 1313 DLLVCNCALATLGD--PAVAVGNMAATLKEGGFLLLHTLLAGHP-LGEM----VGFLTSPE---QGGRHLLSQDQWESLF 1382 (2512)
T ss_dssp CEEEEECC----------------------CCEEEEEEC----------------------------------CTTTTSS
T ss_pred eEEEEccccccccc--HHHHHHHHHHhcCCCcEEEEEecccccc-cccc----cccccccc---ccCCcccCHHHHHHHH
Confidence 99999999997665 3578999999999999999987532110 0000 00000000 0012234677999999
Q ss_pred HhcCCCeeEEEE
Q 038113 89 TGAGFGGIRFES 100 (112)
Q Consensus 89 ~~aGf~~~~~~~ 100 (112)
+++||+.+....
T Consensus 1383 ~~~gf~~~~~~~ 1394 (2512)
T 2vz8_A 1383 AGASLHLVALKR 1394 (2512)
T ss_dssp TTTTEEEEEEEE
T ss_pred HhCCCceeeecc
Confidence 999999876643
No 139
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.32 E-value=0.0039 Score=41.00 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=43.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++..+ .+ ...+++++.+.|+|||++++.+.. . .. ...+++.+.+
T Consensus 143 D~V~~~~~----~~--~~~~l~~~~~~LkpgG~l~~~~g~---~--~~----------------------~~~~~~~~~l 189 (240)
T 1xdz_A 143 DIVTARAV----AR--LSVLSELCLPLVKKNGLFVALKAA---S--AE----------------------EELNAGKKAI 189 (240)
T ss_dssp EEEEEECC----SC--HHHHHHHHGGGEEEEEEEEEEECC------CH----------------------HHHHHHHHHH
T ss_pred cEEEEecc----CC--HHHHHHHHHHhcCCCCEEEEEeCC---C--ch----------------------HHHHHHHHHH
Confidence 99998763 33 568999999999999999886310 0 00 0134677889
Q ss_pred HhcCCCeeEEEEe
Q 038113 89 TGAGFGGIRFESF 101 (112)
Q Consensus 89 ~~aGf~~~~~~~~ 101 (112)
+++||+..++...
T Consensus 190 ~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 190 TTLGGELENIHSF 202 (240)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHcCCeEeEEEEE
Confidence 9999998877653
No 140
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.30 E-value=0.025 Score=39.72 Aligned_cols=38 Identities=3% Similarity=-0.213 Sum_probs=30.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++...+|... ...+|+++.++|+|||++++++...
T Consensus 243 D~Vi~~~p~~~~~---~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 243 DTFITDPPETLEA---IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp SEEEECCCSSHHH---HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred cEEEECCCCchHH---HHHHHHHHHHHcccCCeEEEEEEec
Confidence 9999987766542 4789999999999999887777654
No 141
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.24 E-value=0.0054 Score=38.39 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=42.1
Q ss_pred cEEEec-ccccc----C--ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCH
Q 038113 9 DAIYMK-WILHD----W--SDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTK 81 (112)
Q Consensus 9 D~v~~~-~vlh~----~--~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~ 81 (112)
|+|++. ..+++ + ..++...+|+++.+.|+|||++++......+.. .. .....
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~--------------------~~~~~ 149 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGG-DM--------------------EKDAV 149 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-------CH--------------------HHHHH
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCC-HH--------------------HHHHH
Confidence 999766 23332 0 224567899999999999999999865322111 00 00123
Q ss_pred HHHHHHHHhcCCCeeEEEEe
Q 038113 82 HELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~ 101 (112)
.+|.+.+...+|+.......
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 150 LEYVIGLDQRVFTAMLYQPL 169 (185)
T ss_dssp HHHHHHSCTTTEEEEEEEES
T ss_pred HHHHHhCCCceEEEEEehhh
Confidence 45666666677888777665
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.23 E-value=0.0032 Score=44.57 Aligned_cols=45 Identities=18% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCCCCcc--cEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 2 FQNVAKG--DAIYMKWILHD---WSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 2 f~~~P~~--D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
++++|.+ |+|++.-.+|. .++....++++++.+.|+|||+++++.
T Consensus 285 ~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 285 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TTTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 3455643 99999888885 445556789999999999999999964
No 143
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.23 E-value=0.0016 Score=43.83 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=42.9
Q ss_pred CCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 3 QNVAK--GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 3 ~~~P~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
+++|+ .|+|++ ++++. .++|+++.+.|+|||++++...... .
T Consensus 173 ~~~~~~~fD~Vi~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~-----------------------------~ 216 (275)
T 1yb2_A 173 DFISDQMYDAVIA-----DIPDP--WNHVQKIASMMKPGSVATFYLPNFD-----------------------------Q 216 (275)
T ss_dssp TCCCSCCEEEEEE-----CCSCG--GGSHHHHHHTEEEEEEEEEEESSHH-----------------------------H
T ss_pred ccCcCCCccEEEE-----cCcCH--HHHHHHHHHHcCCCCEEEEEeCCHH-----------------------------H
Confidence 34454 399987 45553 5799999999999999999763110 1
Q ss_pred HHHHHHHHHhcCCCeeEEEE
Q 038113 81 KHELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~ 100 (112)
.+++.++++++||+.++...
T Consensus 217 ~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 217 SEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHHHHHSGGGTEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEE
Confidence 34566677778888776654
No 144
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.13 E-value=0.0049 Score=37.71 Aligned_cols=40 Identities=5% Similarity=0.037 Sum_probs=32.7
Q ss_pred cEEEeccccccCChHH---------HHHHHHHHHhhCCCCCEEEEEeee
Q 038113 9 DAIYMKWILHDWSDEH---------CLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~---------~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
|+|+....+|..++.. ..++++++.+.|+|||++++....
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9999988888766531 168999999999999999987653
No 145
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.06 E-value=0.0038 Score=41.18 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=43.3
Q ss_pred CCCCcc--cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecC
Q 038113 3 QNVAKG--DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERT 80 (112)
Q Consensus 3 ~~~P~~--D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt 80 (112)
+++|+. |+|++ ++++. ..+++++.+.|+|||++++..+..+ .
T Consensus 156 ~~~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~ 199 (255)
T 3mb5_A 156 EGIEEENVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCSN-----------------------------Q 199 (255)
T ss_dssp GCCCCCSEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSHH-----------------------------H
T ss_pred hccCCCCcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCHH-----------------------------H
Confidence 345543 88876 45553 5789999999999999998642110 1
Q ss_pred HHHHHHHHHhcC--CCeeEEEE
Q 038113 81 KHELMTLVTGAG--FGGIRFES 100 (112)
Q Consensus 81 ~~e~~~ll~~aG--f~~~~~~~ 100 (112)
.+++.++++++| |..+++..
T Consensus 200 ~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 200 VMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHHHHHHHTGGGBSCCEEEC
T ss_pred HHHHHHHHHHcCCCccccEEEE
Confidence 346677888888 88877654
No 146
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.05 E-value=0.0018 Score=45.27 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=34.7
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
+|+. |+|+...++|++..++....+.++++.|+|||++++.
T Consensus 113 ~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3443 9999999999988777788899999999999999854
No 147
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.04 E-value=0.021 Score=36.77 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++... .+....+++++.+.|+|||.+++.+....
T Consensus 135 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 135 DFIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp SEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred CEEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 88876543 33456899999999999998887665543
No 148
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.89 E-value=0.0096 Score=40.22 Aligned_cols=35 Identities=6% Similarity=0.116 Sum_probs=30.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCC---C--CCEEEEE
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIP---K--DGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~---p--gg~l~i~ 45 (112)
|+|+++.++|+.++ ...+++.+.+.|+ | ||+++++
T Consensus 165 D~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 165 QVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 99999999998655 5789999999999 9 9998774
No 149
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=95.81 E-value=0.0036 Score=41.21 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=39.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++ ++++. ..+|+++.+.|+|||++++..+... ...+..+.+
T Consensus 168 D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~~l 211 (258)
T 2pwy_A 168 DGVAL-----DLMEP--WKVLEKAALALKPDRFLVAYLPNIT-----------------------------QVLELVRAA 211 (258)
T ss_dssp EEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEESCHH-----------------------------HHHHHHHHH
T ss_pred CEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeCCHH-----------------------------HHHHHHHHH
Confidence 99986 35553 4799999999999999999773110 123556677
Q ss_pred HhcCCCeeEEEE
Q 038113 89 TGAGFGGIRFES 100 (112)
Q Consensus 89 ~~aGf~~~~~~~ 100 (112)
+++||..+++..
T Consensus 212 ~~~gf~~~~~~~ 223 (258)
T 2pwy_A 212 EAHPFRLERVLE 223 (258)
T ss_dssp TTTTEEEEEEEE
T ss_pred HHCCCceEEEEE
Confidence 778888776554
No 150
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.79 E-value=0.0023 Score=46.76 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=34.7
Q ss_pred CCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEE
Q 038113 4 NVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 4 ~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 44 (112)
++|+. |+|+...++|++.+++....+.++++.|+|||++++
T Consensus 220 ~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 220 SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred ccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 34544 999998888988888888889999999999999985
No 151
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.69 E-value=0.018 Score=37.69 Aligned_cols=37 Identities=14% Similarity=0.242 Sum_probs=28.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++... .+....+++++.+.|+|||++++.+...+
T Consensus 149 D~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 149 DLFFLDAD-----KENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred CEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 99987643 33356789999999999999998765443
No 152
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.66 E-value=0.041 Score=34.52 Aligned_cols=41 Identities=2% Similarity=-0.124 Sum_probs=32.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHh--hCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYK--SIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~--aL~pgg~l~i~e~~~~ 50 (112)
|+|++...+|.. .++..++++++.+ .|+|||++++......
T Consensus 115 D~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 115 DLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp SEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred cEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 999988776643 4557889999999 9999999999665443
No 153
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.63 E-value=0.054 Score=36.45 Aligned_cols=60 Identities=13% Similarity=0.199 Sum_probs=43.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++... ....++++++.+.|+|||.+++.+........ ....+++.+.+
T Consensus 194 D~Vi~~~p------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----------------------~~~~~~i~~~~ 244 (278)
T 2frn_A 194 DRILMGYV------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP-----------------------REPFETFKRIT 244 (278)
T ss_dssp EEEEECCC------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT-----------------------TTTHHHHHHHH
T ss_pred cEEEECCc------hhHHHHHHHHHHHCCCCeEEEEEEeecccccc-----------------------ccHHHHHHHHH
Confidence 88877432 12357899999999999999998875421110 12466888999
Q ss_pred HhcCCCeeE
Q 038113 89 TGAGFGGIR 97 (112)
Q Consensus 89 ~~aGf~~~~ 97 (112)
+++||+...
T Consensus 245 ~~~G~~~~~ 253 (278)
T 2frn_A 245 KEYGYDVEK 253 (278)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeeEE
Confidence 999998766
No 154
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.60 E-value=0.018 Score=39.82 Aligned_cols=87 Identities=10% Similarity=-0.046 Sum_probs=52.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hhhhh-hhh-chh--hhhcCCCcee-cC-H
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRT-LSKII-SQG-DVL--MMTQNPGGKE-RT-K 81 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-~~~~~-~~~-~~~--~~~~~~~g~~-rt-~ 81 (112)
=++++-.+||.+++++..++++.+.+.+.||+.|++ |.+.++.+.... ..... ..+ ... .......... ++ .
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~-d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV-ETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE-ECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE-EecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 477788899999999999999999999889887755 555443321100 00000 001 000 0000001112 25 7
Q ss_pred HHHHHHHHhcCCCee
Q 038113 82 HELMTLVTGAGFGGI 96 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~ 96 (112)
++..++|.+.||+.+
T Consensus 260 ~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 260 AVVADWLNRHGWRAT 274 (310)
T ss_dssp CCHHHHHTTTTEEEE
T ss_pred HHHHHHHHHCcCccc
Confidence 799999999999987
No 155
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.47 E-value=0.029 Score=37.05 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=29.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPK 51 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~ 51 (112)
|+|++... .+.....++++.+.|+|||.+++-+.....
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 138 DFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred eEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 88877543 333567999999999999999987766543
No 156
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=95.39 E-value=0.0092 Score=42.34 Aligned_cols=38 Identities=13% Similarity=0.101 Sum_probs=33.1
Q ss_pred cEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHD---WSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++...+|. ...+...++++++++.|+|||+++|+.
T Consensus 300 D~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 300 DIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp EEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 99999989887 445667899999999999999999974
No 157
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.28 E-value=0.018 Score=39.71 Aligned_cols=34 Identities=9% Similarity=0.159 Sum_probs=28.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++... .++ ..++++++++.|+|||++++.+.
T Consensus 190 DvV~~~a~---~~d--~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAAL---AEP--KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTT---CSC--HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCC---ccC--HHHHHHHHHHHcCCCcEEEEEcC
Confidence 99988654 233 57899999999999999999763
No 158
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.09 E-value=0.012 Score=39.24 Aligned_cols=70 Identities=7% Similarity=-0.099 Sum_probs=46.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|+...+ .+ ...+++.+.+.|+|||++++.... ... . ..+++.+.+
T Consensus 153 D~I~s~a~----~~--~~~ll~~~~~~LkpgG~l~~~~g~---~~~-~-----------------------e~~~~~~~l 199 (249)
T 3g89_A 153 ARAVARAV----AP--LCVLSELLLPFLEVGGAAVAMKGP---RVE-E-----------------------ELAPLPPAL 199 (249)
T ss_dssp EEEEEESS----CC--HHHHHHHHGGGEEEEEEEEEEECS---CCH-H-----------------------HHTTHHHHH
T ss_pred eEEEECCc----CC--HHHHHHHHHHHcCCCeEEEEEeCC---CcH-H-----------------------HHHHHHHHH
Confidence 99987654 22 357999999999999999986521 110 0 022456777
Q ss_pred HhcCCCeeEEEEe--C---CceEEEEEE
Q 038113 89 TGAGFGGIRFESF--I---CNLWVMEFY 111 (112)
Q Consensus 89 ~~aGf~~~~~~~~--~---~~~~vie~~ 111 (112)
+..||+..++.+. + ....++.+.
T Consensus 200 ~~~G~~~~~~~~~~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 200 ERLGGRLGEVLALQLPLSGEARHLVVLE 227 (249)
T ss_dssp HHHTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred HHcCCeEEEEEEeeCCCCCCcEEEEEEE
Confidence 7889998887765 2 235566554
No 159
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.09 E-value=0.0063 Score=43.83 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=31.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|+.. ..|.+++ ..+.|+++++.|+|||.+++.|...
T Consensus 290 DlVisd-gsH~~~d--~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 290 DIVIDD-GSHINAH--VRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp EEEEEC-SCCCHHH--HHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred cEEEEC-Ccccchh--HHHHHHHHHHhcCCCeEEEEEeccc
Confidence 999764 5676644 5789999999999999999988763
No 160
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.09 E-value=0.0089 Score=40.08 Aligned_cols=31 Identities=26% Similarity=0.564 Sum_probs=25.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++ +.++. ..+|+++.+.|+|||++++.+
T Consensus 183 D~V~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 183 DALFL-----DVPDP--WNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp EEEEE-----CCSCG--GGTHHHHHHHEEEEEEEEEEE
T ss_pred CEEEE-----CCcCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 98886 34543 579999999999999999976
No 161
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.07 E-value=0.21 Score=37.88 Aligned_cols=88 Identities=17% Similarity=0.133 Sum_probs=57.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhh--cCCCceecCHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMT--QNPGGKERTKHELMT 86 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~rt~~e~~~ 86 (112)
-+++.--+|..++.+++.++|+.+.+ + |+|.+++.|.+.+..+..+. .+.. .-.+.... +..-....+.++..+
T Consensus 219 tl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f-~~~m-~~~~~~~g~~l~~~~~~~~~~~~~~ 294 (695)
T 2zwa_A 219 KVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPF-SKQM-LAHFKRNDSPLQSVLKYNTIESQVQ 294 (695)
T ss_dssp EEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHH-HHHH-HHHHHHTTCCCCGGGTCCSHHHHHH
T ss_pred EEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChH-HHHH-HHHHHHcCCCCCccccCCCHHHHHH
Confidence 46777779999999999999999985 5 68888899988775443321 1110 00010000 000012347899999
Q ss_pred HHHhcCCCeeEEEE
Q 038113 87 LVTGAGFGGIRFES 100 (112)
Q Consensus 87 ll~~aGf~~~~~~~ 100 (112)
.|.++||+.+....
T Consensus 295 ~~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 295 RFNKLGFAYVNVGD 308 (695)
T ss_dssp HHHHTTCCEEEEEE
T ss_pred HHHHCCCCCcceee
Confidence 99999999876654
No 162
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=94.99 E-value=0.058 Score=36.31 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=34.6
Q ss_pred CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 4 NVAK-GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 4 ~~P~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
+.|+ +|++++.-++|++.+++....+ ++.++|++++.++-.+
T Consensus 164 ~~~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 164 PPAEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CCCCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred CCCCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 3444 4999999999999988876677 8999999998777776
No 163
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.91 E-value=0.039 Score=35.41 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=40.9
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHH
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMT 86 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 86 (112)
..|++++...+ + .. +++++.+.|+|||++++..... .+..++.+
T Consensus 122 ~~D~v~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~~-----------------------------~~~~~~~~ 165 (204)
T 3njr_A 122 LPEAVFIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVTL-----------------------------ESETLLTQ 165 (204)
T ss_dssp CCSEEEECSCC----C--HH-HHHHHHHHSCTTCEEEEEECSH-----------------------------HHHHHHHH
T ss_pred CCCEEEECCcc----c--HH-HHHHHHHhcCCCcEEEEEecCc-----------------------------ccHHHHHH
Confidence 34999877644 2 23 9999999999999998854311 12456778
Q ss_pred HHHhcCCCeeEEE
Q 038113 87 LVTGAGFGGIRFE 99 (112)
Q Consensus 87 ll~~aGf~~~~~~ 99 (112)
++++.|+++.++.
T Consensus 166 ~l~~~g~~i~~i~ 178 (204)
T 3njr_A 166 LHARHGGQLLRID 178 (204)
T ss_dssp HHHHHCSEEEEEE
T ss_pred HHHhCCCcEEEEE
Confidence 8888898877653
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=94.82 E-value=0.024 Score=38.99 Aligned_cols=25 Identities=16% Similarity=0.391 Sum_probs=21.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.++|+++.+.|+|||++++......
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 5899999999999999998776443
No 165
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.77 E-value=0.016 Score=37.43 Aligned_cols=38 Identities=16% Similarity=0.331 Sum_probs=29.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++....|++.+ ..++++.+ +.|+|||.+++.+...
T Consensus 136 D~V~~d~~~~~~~~--~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 136 DMVFLDHWKDRYLP--DTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp SEEEECSCGGGHHH--HHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEEEcCCcccchH--HHHHHHhc-cccCCCeEEEEeCCCC
Confidence 99999887777644 35788888 9999999998866543
No 166
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=94.75 E-value=0.046 Score=36.09 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=28.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++.. +.+.....++++.+.|+|||.+++.+....
T Consensus 138 D~V~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 138 DLIFIDA-----DKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp SEEEECS-----CGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 9998743 334456799999999999998888665443
No 167
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.43 E-value=0.048 Score=35.02 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=28.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++.. +.+....+++++.+.|+|||.+++.+....
T Consensus 142 D~v~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 142 DLIYIDA-----DKANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred cEEEECC-----CHHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 8887543 234457899999999999999998776654
No 168
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.41 E-value=0.016 Score=36.99 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
|+|++..++|++++ ++.+.|+|||++++.-..
T Consensus 145 D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred cEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999999986 478899999999996543
No 169
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=94.40 E-value=0.017 Score=36.98 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=27.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++..++|++++ ++.+.|+|||++++...
T Consensus 148 D~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 148 DRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEEEESSBBSSCCH--------HHHHTEEEEEEEEEEES
T ss_pred eEEEECCchHHHHH--------HHHHHcCCCcEEEEEEC
Confidence 99999999998874 67899999999998753
No 170
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.35 E-value=0.47 Score=31.26 Aligned_cols=74 Identities=7% Similarity=0.036 Sum_probs=51.1
Q ss_pred CCCCc---ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceec
Q 038113 3 QNVAK---GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKER 79 (112)
Q Consensus 3 ~~~P~---~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 79 (112)
+++|. .|++++.++ ..+-...||..+.+.|+|+|++++ .+. .
T Consensus 77 ~~l~~~~~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVl-q~~---~--------------------------- 121 (225)
T 3kr9_A 77 AAFEETDQVSVITIAGM----GGRLIARILEEGLGKLANVERLIL-QPN---N--------------------------- 121 (225)
T ss_dssp GGCCGGGCCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEE-EES---S---------------------------
T ss_pred hhcccCcCCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEE-ECC---C---------------------------
Confidence 45552 498887765 344468899999999999999776 322 1
Q ss_pred CHHHHHHHHHhcCCCeeEEEEe---CCceEEEEEE
Q 038113 80 TKHELMTLVTGAGFGGIRFESF---ICNLWVMEFY 111 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~---~~~~~vie~~ 111 (112)
.....+++|++.||..++..-+ +-++.|+.+.
T Consensus 122 ~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 122 REDDLRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp CHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 1446789999999998876432 3356666654
No 171
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=94.32 E-value=0.019 Score=37.17 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=27.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++..++|++++ ++.+.|+|||++++...
T Consensus 136 D~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 136 DRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred cEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 99999999999875 47889999999999864
No 172
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=94.28 E-value=0.015 Score=36.54 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=28.1
Q ss_pred cEEEecccccc----CChHH-----HHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHD----WSDEH-----CLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~----~~d~~-----~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|+....+|. ..|.. ..++++++.+.|+|||++++...
T Consensus 99 D~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 99 DVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 99997554432 12221 15899999999999999998764
No 173
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=94.02 E-value=0.13 Score=31.54 Aligned_cols=54 Identities=9% Similarity=0.105 Sum_probs=39.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|+|++..+ ++...+++++++. |||++++.+...+ +..++.++
T Consensus 101 ~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~-----------------------------~~~~~~~~ 143 (183)
T 2yxd_A 101 FNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE-----------------------------NAAKIINE 143 (183)
T ss_dssp CSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH-----------------------------HHHHHHHH
T ss_pred CcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc-----------------------------cHHHHHHH
Confidence 399999888 2246789998887 9999998763110 13467888
Q ss_pred HHhcCCCeeEE
Q 038113 88 VTGAGFGGIRF 98 (112)
Q Consensus 88 l~~aGf~~~~~ 98 (112)
++++||....+
T Consensus 144 l~~~g~~~~~~ 154 (183)
T 2yxd_A 144 FESRGYNVDAV 154 (183)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHcCCeEEEE
Confidence 99999876544
No 174
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=93.80 E-value=0.06 Score=33.90 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=28.1
Q ss_pred cEEEeccccccCC----hHH-----HHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWS----DEH-----CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~----d~~-----~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|+....+|... |.. ..++|+++++.|+|||++++..
T Consensus 108 D~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 108 DIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999877776532 221 1358999999999999998743
No 175
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=93.75 E-value=0.026 Score=39.36 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=27.6
Q ss_pred cEEEeccccccCC-hHHHHHHHHHHHhhCCCCCEEEE
Q 038113 9 DAIYMKWILHDWS-DEHCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 9 D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~l~i 44 (112)
|+|+...+.|.+. .+....+++++.+.|+|||+++.
T Consensus 135 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 135 DIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 9999876654442 23367899999999999999873
No 176
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.47 E-value=0.024 Score=40.00 Aligned_cols=41 Identities=10% Similarity=0.034 Sum_probs=32.1
Q ss_pred ccEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 8 GDAIYMKWILHDWSD-EHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
.|+|++..+.|.... +....+++++.+.|+|||.+++.+..
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 399998776666653 33678999999999999999876654
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.38 E-value=0.034 Score=37.05 Aligned_cols=22 Identities=5% Similarity=0.138 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhCCCCCEEEEEe
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e 46 (112)
...+++.+.+.|+|||+++++-
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEE
Confidence 5789999999999999998853
No 178
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=93.37 E-value=0.12 Score=35.45 Aligned_cols=37 Identities=5% Similarity=0.022 Sum_probs=26.0
Q ss_pred ccEEEeccccc---cCChHH-HHHHHHHHHhhCCCCCEEEE
Q 038113 8 GDAIYMKWILH---DWSDEH-CLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 8 ~D~v~~~~vlh---~~~d~~-~~~iL~~~~~aL~pgg~l~i 44 (112)
.|+|+.....+ ...|+. ...+|+.+++.|+|||.+++
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 49998866543 222322 22689999999999998877
No 179
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=93.31 E-value=0.025 Score=36.77 Aligned_cols=36 Identities=8% Similarity=0.286 Sum_probs=29.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++....+ +...+++++.+.|+|||++++.+...
T Consensus 128 D~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 128 DVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp EEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred cEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 9999877654 34679999999999999999876443
No 180
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=93.23 E-value=0.058 Score=35.67 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=26.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|+...+. ..++++++.|+|||++++..+..
T Consensus 150 D~v~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 150 DAIIRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEEEEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred eEEEEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 999976552 25899999999999999988654
No 181
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=93.14 E-value=0.11 Score=33.36 Aligned_cols=37 Identities=14% Similarity=0.450 Sum_probs=28.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++... ......+++++.+.|+|||.+++.+....
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 183 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLWR 183 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCcC
Confidence 88887432 33356899999999999999998775543
No 182
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=93.08 E-value=0.088 Score=34.59 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=27.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHh-hCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYK-SIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~-aL~pgg~l~i~e~ 47 (112)
|+|++... |. +...+|+++.+ .|+|||++++.+.
T Consensus 154 D~I~~d~~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNA-HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SEEEEESS-CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CEEEECCc-hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 99887655 53 34679999997 9999999999775
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=93.05 E-value=0.04 Score=35.87 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=26.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++..++|++++ ++.+.|+|||++++.-.
T Consensus 160 D~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 160 DVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEEEECSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred cEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEe
Confidence 99999999998875 56889999999998653
No 184
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=92.95 E-value=0.17 Score=32.34 Aligned_cols=37 Identities=14% Similarity=0.448 Sum_probs=26.6
Q ss_pred cEEEeccccccCChH-------HHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDE-------HCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~-------~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++....+ |... ....+++++.+.|+|||.+++..
T Consensus 113 D~i~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 113 DRLYLNFSDP-WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SEEEEESCCC-CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CEEEEECCCC-ccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9998775432 2221 12479999999999999998853
No 185
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=92.92 E-value=0.066 Score=34.87 Aligned_cols=36 Identities=8% Similarity=0.263 Sum_probs=27.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++.... ......++++.+.|+|||.+++-+...
T Consensus 131 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 131 QLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp EEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 999875432 234568999999999999998855544
No 186
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=92.67 E-value=0.091 Score=31.94 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=26.4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHH--hhCCCCCEEEEEeeec
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCY--KSIPKDGMVIIVETIL 49 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~--~aL~pgg~l~i~e~~~ 49 (112)
.|+|++...+| -..+ ++++.+. +.|+|||.+++.....
T Consensus 111 ~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 111 FTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred eEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 39999988777 2222 3444444 9999999998866543
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=92.60 E-value=0.049 Score=37.56 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=27.5
Q ss_pred cEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEE
Q 038113 9 DAIYMKWILHDWSD-EHCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 9 D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i 44 (112)
|+|+...+.+.+.. +....+++++.+.|+|||+++.
T Consensus 107 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 107 DIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99998765554432 2356899999999999999974
No 188
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=92.60 E-value=0.049 Score=35.43 Aligned_cols=37 Identities=5% Similarity=0.150 Sum_probs=25.6
Q ss_pred cEEEeccccccCChHH-H------HHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEH-C------LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~-~------~~iL~~~~~aL~pgg~l~i~e 46 (112)
|.|++..... |+... . ..+++++++.|+|||.+++..
T Consensus 107 d~v~~~~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 107 RMVQLFFPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEEEESCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred heEEEeCCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 8887764322 33221 1 259999999999999998864
No 189
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.48 E-value=0.15 Score=32.79 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=18.7
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e 46 (112)
..+|+++++.|+|||.+++..
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 579999999999999998864
No 190
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=92.48 E-value=0.083 Score=36.68 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=26.1
Q ss_pred cEEEeccccccCC-hHHHHHHHHHHHhhCCCCCEEE
Q 038113 9 DAIYMKWILHDWS-DEHCLKLFKKCYKSIPKDGMVI 43 (112)
Q Consensus 9 D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~l~ 43 (112)
|+|+...+.+.+. ......+|+++++.|+|||+++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9999766322222 2335689999999999999987
No 191
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=92.48 E-value=0.055 Score=37.06 Aligned_cols=31 Identities=16% Similarity=0.343 Sum_probs=27.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++..++|+++ +++.+.|+|||++++...
T Consensus 146 D~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 146 DVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred EEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 9999999999987 467789999999999754
No 192
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=92.38 E-value=0.056 Score=34.19 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=24.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++.. ++ + ...+++++++.|+|||.+++.
T Consensus 134 D~i~~~~-~~---~--~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 134 DGVISRA-FA---S--LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEEECSC-SS---S--HHHHHHHHTTSEEEEEEEEEE
T ss_pred CEEEEec-cC---C--HHHHHHHHHHhcCCCcEEEEE
Confidence 9998643 22 2 458999999999999999986
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=92.31 E-value=0.05 Score=34.72 Aligned_cols=38 Identities=13% Similarity=0.290 Sum_probs=27.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.|+|++.. +..+...+++++.+.|+|||.+++.+....
T Consensus 127 fD~v~~~~-----~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 127 IDILFMDC-----DVFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp EEEEEEET-----TTSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred CCEEEEcC-----ChhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 37776652 223357899999999999999988665443
No 194
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=92.09 E-value=0.099 Score=33.94 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=25.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++ +.++ ...+++++.+.|+|||++++...
T Consensus 160 D~v~~-----~~~~--~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 160 HAAFV-----DVRE--PWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp SEEEE-----CSSC--GGGGHHHHHHHBCTTCEEEEEES
T ss_pred cEEEE-----CCcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 99886 3343 35789999999999999999775
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=91.80 E-value=0.073 Score=34.38 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=25.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++...+|++. +++.+.|+|||++++.-
T Consensus 165 D~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 165 NAIHVGAAAPDTP--------TELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEEECSCBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred cEEEECCchHHHH--------HHHHHHhcCCCEEEEEE
Confidence 9999999998865 56788999999998864
No 196
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=91.75 E-value=0.072 Score=36.03 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=27.0
Q ss_pred cEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDEHC--LKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++....+.-+.+.. .+++++++++|+|||.+++.
T Consensus 153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99988544332222222 68999999999999999875
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=91.39 E-value=0.16 Score=33.61 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=27.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++... ......+++++.+.|+|||.+++-+...
T Consensus 158 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 99987543 2335789999999999999998766444
No 198
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=91.33 E-value=0.093 Score=33.42 Aligned_cols=39 Identities=5% Similarity=0.071 Sum_probs=29.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHH--HhhCCCCCEEEEEeeec
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKC--YKSIPKDGMVIIVETIL 49 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~l~i~e~~~ 49 (112)
.|+|++...+| ..+ ...+++.+ .+.|+|||.+++.....
T Consensus 126 fD~I~~~~~~~-~~~--~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 126 FDVVFLDPPFH-FNL--AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEEEECCCSS-SCH--HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCEEEECCCCC-Ccc--HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 59999887765 333 46788888 55799999998876543
No 199
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=90.96 E-value=0.18 Score=33.74 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=22.2
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPK 51 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~ 51 (112)
.++|+++.+.|+|||++++.......
T Consensus 191 ~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 191 KELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred HHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 68999999999999999988765543
No 200
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.89 E-value=0.1 Score=35.26 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=25.8
Q ss_pred cEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEH--CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++....+.-+.+. ..++++++++.|+|||.+++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8888755433222222 2678999999999999998863
No 201
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=90.88 E-value=2.4 Score=27.97 Aligned_cols=69 Identities=6% Similarity=0.010 Sum_probs=49.5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|++++.++. -+-...||....+.|+++|++++.- + ...+++++|
T Consensus 91 ~D~IviaGmG----g~lI~~IL~~~~~~l~~~~~lIlqp-~------------------------------~~~~~lr~~ 135 (230)
T 3lec_A 91 IDTITICGMG----GRLIADILNNDIDKLQHVKTLVLQP-N------------------------------NREDDLRKW 135 (230)
T ss_dssp CCEEEEEEEC----HHHHHHHHHHTGGGGTTCCEEEEEE-S------------------------------SCHHHHHHH
T ss_pred cCEEEEeCCc----hHHHHHHHHHHHHHhCcCCEEEEEC-C------------------------------CChHHHHHH
Confidence 4998877654 3457889999999999999876632 1 025678999
Q ss_pred HHhcCCCeeEEEEe---CCceEEEEEE
Q 038113 88 VTGAGFGGIRFESF---ICNLWVMEFY 111 (112)
Q Consensus 88 l~~aGf~~~~~~~~---~~~~~vie~~ 111 (112)
|.+.||..++..-+ +-++.|+.+.
T Consensus 136 L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 136 LAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp HHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 99999998876533 3456677664
No 202
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=90.83 E-value=0.24 Score=30.54 Aligned_cols=38 Identities=5% Similarity=0.034 Sum_probs=26.8
Q ss_pred cEEEeccccccCChHHHHHHHHHH--HhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKC--YKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~l~i~e~~~ 49 (112)
|+|++...+|....+ ..++.+ .+.|+|||.+++.....
T Consensus 118 D~i~~~~~~~~~~~~---~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIV---SQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEECCCGGGCCHH---HHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CEEEECCCCCchhHH---HHHHHHHHhcccCCCCEEEEEeCCc
Confidence 999988776643333 445555 78899999998865543
No 203
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=90.76 E-value=0.15 Score=36.82 Aligned_cols=42 Identities=7% Similarity=0.132 Sum_probs=31.5
Q ss_pred cEEEe------ccccccCChH-------HH-------HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYM------KWILHDWSDE-------HC-------LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~------~~vlh~~~d~-------~~-------~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++ ..+++..+|. +. .++|+++.+.|+|||++++.++...
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 99996 3455554442 11 6799999999999999999887654
No 204
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=90.52 E-value=0.15 Score=33.45 Aligned_cols=21 Identities=14% Similarity=0.218 Sum_probs=18.6
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e 46 (112)
..+|+++++.|+|||.+++.-
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEEEe
Confidence 369999999999999998864
No 205
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=90.49 E-value=0.1 Score=33.97 Aligned_cols=37 Identities=11% Similarity=0.298 Sum_probs=28.6
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++... .++...+++++.+.|+|||.+++.+...+
T Consensus 150 D~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 150 DLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred CEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 88876543 33457899999999999999988766543
No 206
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=90.48 E-value=0.17 Score=34.62 Aligned_cols=22 Identities=9% Similarity=0.007 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEEe
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e 46 (112)
...+|+++++.|+|||++++..
T Consensus 150 ~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 150 FTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 5689999999999999999864
No 207
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=90.09 E-value=0.28 Score=35.82 Aligned_cols=25 Identities=12% Similarity=0.327 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.++|+++.+.|+|||+|+...+...
T Consensus 226 ~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 226 RELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred HHHHHHHHHhcCCCCEEEEecccCC
Confidence 5789999999999999998876554
No 208
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=89.98 E-value=0.17 Score=36.93 Aligned_cols=25 Identities=8% Similarity=0.228 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.++|+++.+.|+|||+|+...+...
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhcCCCcEEEEEeccCc
Confidence 7899999999999999998776443
No 209
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=89.97 E-value=0.14 Score=34.92 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=24.1
Q ss_pred cEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEHC--LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++-..-+.-+.... ..++++++++|+|||.+++.-
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99887443332222211 679999999999999998864
No 210
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=89.89 E-value=0.32 Score=32.61 Aligned_cols=39 Identities=15% Similarity=0.053 Sum_probs=26.8
Q ss_pred ccEEEeccccccCCh---H-H-HHHHHHHHHhhCCCCC--EEEEEee
Q 038113 8 GDAIYMKWILHDWSD---E-H-CLKLFKKCYKSIPKDG--MVIIVET 47 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d---~-~-~~~iL~~~~~aL~pgg--~l~i~e~ 47 (112)
.|+|+.... |..++ + . ...+|+.+++.|+||| .+++...
T Consensus 141 fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 141 TDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 399988755 43322 1 1 2248999999999999 8887543
No 211
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=89.89 E-value=0.15 Score=32.77 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=26.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++...+|++ ++++.+.|+|||++++.-.
T Consensus 164 D~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 164 DAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp EEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 999999998865 4677899999999998754
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=89.82 E-value=0.12 Score=35.72 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=23.0
Q ss_pred cEEEeccccccCChHHH---HHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEHC---LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~---~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++... +.+..... .++++++++.|+|||.+++..
T Consensus 183 D~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 183 DVIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99987443 33332221 689999999999999998854
No 213
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=89.76 E-value=0.083 Score=34.40 Aligned_cols=36 Identities=19% Similarity=0.356 Sum_probs=26.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++... .+....+++++.+.|+|||.+++-+...
T Consensus 144 D~V~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 144 DMIFIDAA-----KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp EEEEEETT-----SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred cEEEEcCc-----HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 99985432 2335679999999999999997755444
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=89.76 E-value=0.14 Score=35.13 Aligned_cols=38 Identities=5% Similarity=0.099 Sum_probs=28.3
Q ss_pred cEEEecccccc---CChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHD---WSDEH--CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~---~~d~~--~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++....|. -+.+. ..+++++++++|+|||.+++..
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99988766544 11111 3689999999999999999864
No 215
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=89.68 E-value=0.095 Score=34.81 Aligned_cols=32 Identities=9% Similarity=0.239 Sum_probs=25.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++ +.++. ..+|+++.+.|+|||++++...
T Consensus 173 D~v~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 173 DRAVL-----DMLAP--WEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEES
T ss_pred eEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeC
Confidence 98887 33332 3789999999999999999764
No 216
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=89.63 E-value=0.13 Score=31.72 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=27.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHH--hhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCY--KSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~--~aL~pgg~l~i~e~~~~ 50 (112)
|+|++...+|. .....+++.+. +.|+|||.+++......
T Consensus 102 D~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 102 DLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp EEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 99988766542 22345666665 89999999998765443
No 217
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=89.61 E-value=0.29 Score=33.77 Aligned_cols=39 Identities=8% Similarity=0.205 Sum_probs=30.3
Q ss_pred cEEEeccccccCChHHH----------------HHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHC----------------LKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~----------------~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|+..--++.++.++. ..+++++.+.|+|||+++++-+
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 99988777766665442 2689999999999999988763
No 218
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=89.59 E-value=0.15 Score=33.33 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=27.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
|+|++.. +......+++++.+.|+|||.+++-+...
T Consensus 149 D~I~~d~-----~~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 149 DFGFVDA-----DKPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred CEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 9888642 23446789999999999999987755433
No 219
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=89.54 E-value=0.16 Score=35.27 Aligned_cols=39 Identities=13% Similarity=0.317 Sum_probs=28.0
Q ss_pred cEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEH--CLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++....+...... ..++++++++.|+|||.+++.-.
T Consensus 161 DvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 161 DVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 9998765444322221 25799999999999999987654
No 220
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=89.53 E-value=0.18 Score=33.78 Aligned_cols=29 Identities=14% Similarity=-0.082 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 82 HELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
..+++-|.++||++.++...+....++.+
T Consensus 216 ~~vrr~L~~aGF~v~~~~g~~~kr~m~~a 244 (257)
T 2qy6_A 216 GFVRRGLQEAGFTMQKRKGFGRKREMLCG 244 (257)
T ss_dssp HHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence 35678888899997765444444444443
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=89.04 E-value=0.18 Score=32.29 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=25.7
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++...++++. +++.+.|+|||++++...
T Consensus 153 D~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 153 DAIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CEEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 9999998887654 577899999999999753
No 222
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=88.24 E-value=0.33 Score=34.70 Aligned_cols=25 Identities=4% Similarity=0.215 Sum_probs=21.9
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.++|+++.+.|+|||++++..+...
T Consensus 354 ~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 354 SEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhcCCCCEEEEEECCCC
Confidence 5899999999999999999886554
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=87.90 E-value=0.44 Score=32.19 Aligned_cols=38 Identities=5% Similarity=-0.006 Sum_probs=26.2
Q ss_pred ccEEEeccccccCCh----HH-HHHHHHHHHhhCCCCC--EEEEEe
Q 038113 8 GDAIYMKWILHDWSD----EH-CLKLFKKCYKSIPKDG--MVIIVE 46 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d----~~-~~~iL~~~~~aL~pgg--~l~i~e 46 (112)
.|+|+.... +..+. .. ..++|+.+.+.|+||| .+++..
T Consensus 149 fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 149 ADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred cCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 399988765 33222 11 2248999999999999 888744
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=87.29 E-value=0.21 Score=34.13 Aligned_cols=38 Identities=13% Similarity=0.048 Sum_probs=24.6
Q ss_pred cEEEeccccccCChH--HHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHDWSDE--HCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++....+.-+.. ...++++++++.|+|||.+++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999875443322211 13578999999999999998865
No 225
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=86.99 E-value=0.23 Score=34.05 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=24.3
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++.. ++. ..+++++.+.|+|||++++...
T Consensus 189 D~V~~~~-----~~~--~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 189 DAVALDM-----LNP--HVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp EEEEECS-----SST--TTTHHHHGGGEEEEEEEEEEES
T ss_pred eEEEECC-----CCH--HHHHHHHHHhcCCCcEEEEEeC
Confidence 9888732 221 2389999999999999998765
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=86.90 E-value=0.25 Score=34.09 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=25.9
Q ss_pred cEEEeccccccCCh-HHH--HHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSD-EHC--LKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d-~~~--~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++... +.+.. +.. .++++++++.|+|||.+++.
T Consensus 191 DvIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 191 DVIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99987543 22322 111 68999999999999999885
No 227
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=86.84 E-value=0.15 Score=33.37 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=18.2
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 038113 26 LKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~ 45 (112)
..+++++.+.|+|||.+++.
T Consensus 153 ~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 153 NTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEE
Confidence 37999999999999999984
No 228
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=86.42 E-value=0.39 Score=30.48 Aligned_cols=38 Identities=0% Similarity=0.069 Sum_probs=27.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhh--CCCCCEEEEEeeec
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKS--IPKDGMVIIVETIL 49 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~a--L~pgg~l~i~e~~~ 49 (112)
|+|++...+| +.+ ...+++.+.+. |+|||.+++.....
T Consensus 124 D~V~~~~p~~-~~~--~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 124 NIVFVDPPFR-RGL--LEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp EEEEECCSSS-TTT--HHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CEEEECCCCC-CCc--HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 9999877755 333 35677777664 99999998876543
No 229
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=86.28 E-value=0.24 Score=34.39 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=25.9
Q ss_pred cEEEeccccccCChHH---HHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDEH---CLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~---~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++... +.+...+ ..++++++++.|+|||.+++.
T Consensus 196 DlIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 196 DAVIVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99987443 2222111 368999999999999999885
No 230
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=85.81 E-value=0.17 Score=34.02 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=26.0
Q ss_pred cEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDEH--CLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++-...+..+.+. ..+++++++++|+|||.+++.
T Consensus 150 D~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9998854433222111 257999999999999999885
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=85.46 E-value=0.4 Score=30.34 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEEee
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
+..+|+.+.+.|+|||++++...
T Consensus 118 ~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 118 GQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHccCCCEEEEEEc
Confidence 46789999999999999987654
No 232
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=84.76 E-value=6.7 Score=26.04 Aligned_cols=69 Identities=7% Similarity=-0.032 Sum_probs=48.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
.|+|++.++ ..+-...||....+.|++++++++.-. . ....+++|
T Consensus 91 ~D~Iviagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~----~---------------------------~~~~lr~~ 135 (244)
T 3gnl_A 91 IDTIVIAGM----GGTLIRTILEEGAAKLAGVTKLILQPN----I---------------------------AAWQLREW 135 (244)
T ss_dssp CCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEES----S---------------------------CHHHHHHH
T ss_pred ccEEEEeCC----chHHHHHHHHHHHHHhCCCCEEEEEcC----C---------------------------ChHHHHHH
Confidence 488887654 345578899999999999888876421 0 25577999
Q ss_pred HHhcCCCeeEEEEe---CCceEEEEEE
Q 038113 88 VTGAGFGGIRFESF---ICNLWVMEFY 111 (112)
Q Consensus 88 l~~aGf~~~~~~~~---~~~~~vie~~ 111 (112)
|.+.||.+++..-+ +-++-++.+.
T Consensus 136 L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 136 SEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp HHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 99999998654432 3356666654
No 233
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=84.56 E-value=0.54 Score=28.67 Aligned_cols=19 Identities=26% Similarity=0.244 Sum_probs=17.7
Q ss_pred HHHHHHHHhhCCCCCEEEE
Q 038113 26 LKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i 44 (112)
+++++.++++|+|||++.-
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 6899999999999999976
No 234
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=84.10 E-value=1.1 Score=30.29 Aligned_cols=60 Identities=13% Similarity=0.181 Sum_probs=40.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHH
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTL 87 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 87 (112)
+|.|++... . .+...|..+.+.|+|||.|.+.+.+..+... ....+.++++
T Consensus 193 ~D~Vi~~~p-----~-~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~-----------------------~~~~e~i~~~ 243 (278)
T 3k6r_A 193 ADRILMGYV-----V-RTHEFIPKALSIAKDGAIIHYHNTVPEKLMP-----------------------REPFETFKRI 243 (278)
T ss_dssp EEEEEECCC-----S-SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT-----------------------TTTHHHHHHH
T ss_pred CCEEEECCC-----C-cHHHHHHHHHHHcCCCCEEEEEeeecccccc-----------------------hhHHHHHHHH
Confidence 487765432 1 1346888889999999999888876543211 0235567788
Q ss_pred HHhcCCCee
Q 038113 88 VTGAGFGGI 96 (112)
Q Consensus 88 l~~aGf~~~ 96 (112)
.++.|++..
T Consensus 244 ~~~~g~~v~ 252 (278)
T 3k6r_A 244 TKEYGYDVE 252 (278)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCcEE
Confidence 888998754
No 235
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=83.51 E-value=0.02 Score=37.28 Aligned_cols=77 Identities=9% Similarity=-0.006 Sum_probs=47.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHH
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLV 88 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 88 (112)
|+|++...+|+.++.+ ..+.++++.|+|||.+++ +......... ... --+..+.+++.+++
T Consensus 146 D~v~~~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~-~~~~~~~~~~------------~~~----lp~~~~~~~~~~~l 206 (241)
T 3gdh_A 146 DVVFLSPPWGGPDYAT--AETFDIRTMMSPDGFEIF-RLSKKITNNI------------VYF----LPRNADIDQVASLA 206 (241)
T ss_dssp SEEEECCCCSSGGGGG--SSSBCTTTSCSSCHHHHH-HHHHHHCSCE------------EEE----EETTBCHHHHHHTT
T ss_pred CEEEECCCcCCcchhh--hHHHHHHhhcCCcceeHH-HHHHhhCCce------------EEE----CCCCCCHHHHHHHh
Confidence 9999999999877653 377789999999999544 3211111100 000 01123577888888
Q ss_pred HhcCCCeeEEEEeCCc
Q 038113 89 TGAGFGGIRFESFICN 104 (112)
Q Consensus 89 ~~aGf~~~~~~~~~~~ 104 (112)
...|.-.+......+.
T Consensus 207 ~~~g~~~i~~~~~~~~ 222 (241)
T 3gdh_A 207 GPGGQVEIEQNFLNNK 222 (241)
T ss_dssp CTTCCEEEEEEEETTE
T ss_pred ccCCCEEEEehhhcCc
Confidence 8777666555554443
No 236
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=82.99 E-value=0.44 Score=31.86 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=23.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++. .+|.. ..++++++.|+|||.+++.
T Consensus 141 D~Ii~d-----~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 141 DLIFCL-----QEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEEES-----SCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred CEEEEC-----CCChH--HHHHHHHHhcCCCcEEEEE
Confidence 777754 34432 4999999999999999885
No 237
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=82.68 E-value=0.46 Score=32.26 Aligned_cols=37 Identities=16% Similarity=0.342 Sum_probs=23.6
Q ss_pred cEEEeccccccCChH---HHHHHHHHHHhhCCCCCEEEEE
Q 038113 9 DAIYMKWILHDWSDE---HCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 9 D~v~~~~vlh~~~d~---~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
|+|++...-+..... ...++++++++.|+|||.+++.
T Consensus 165 D~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 165 DVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998864322101111 1268999999999999999885
No 238
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=81.30 E-value=0.59 Score=32.86 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
++..+.|..+.+.|+|||||+|+-+..-++
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLED 280 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLED 280 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhH
Confidence 446788999999999999999998765443
No 239
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=80.90 E-value=0.67 Score=31.72 Aligned_cols=30 Identities=3% Similarity=0.112 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
++....|..+.+.|+|||+|+|+-+..-++
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLED 239 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLED 239 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHH
Confidence 446789999999999999999998765544
No 240
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=80.42 E-value=0.44 Score=31.87 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=28.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPK 51 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~ 51 (112)
|+|++.... ...++++++.+.|+|||.+++.+....+
T Consensus 188 D~Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 188 DRVIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp EEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred eEEEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCccc
Confidence 888776543 2456899999999999999988876543
No 241
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=80.11 E-value=2.2 Score=29.37 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=25.7
Q ss_pred cEEEecccccc-CCh-HH----HHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILHD-WSD-EH----CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~-~~d-~~----~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++.--.+. +.+ .+ -..+++++++.|+|||+++++.
T Consensus 274 D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 274 DRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp SEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 88877433222 111 11 2689999999999999999964
No 242
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=77.87 E-value=4.1 Score=24.00 Aligned_cols=27 Identities=11% Similarity=0.210 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHhhCCCC--CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPKD--GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~pg--g~l~i~e~ 47 (112)
+|+.+.+++..+.+++..| |++++.+-
T Consensus 82 ~de~ve~vv~~I~~~~~tg~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEYFPHYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEEEEe
Confidence 7788999999999888887 99988875
No 243
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=77.44 E-value=3.3 Score=27.82 Aligned_cols=18 Identities=6% Similarity=0.431 Sum_probs=16.8
Q ss_pred HHHHHHH-hhCCCCCEEEE
Q 038113 27 KLFKKCY-KSIPKDGMVII 44 (112)
Q Consensus 27 ~iL~~~~-~aL~pgg~l~i 44 (112)
.+++++. +.|+|||.+++
T Consensus 229 ~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 229 DFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp HHHHHHHHHCCCTTCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEE
Confidence 7899999 99999999986
No 244
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=77.25 E-value=1.7 Score=30.48 Aligned_cols=26 Identities=4% Similarity=0.105 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
.....+++++.+.|+|||.+++....
T Consensus 312 ~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 312 RAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 34678999999999999999887753
No 245
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=76.66 E-value=0.47 Score=35.20 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=35.5
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
|+|+...+|||++|++...-+.++.+.|+++++.++...+..+.
T Consensus 136 D~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 136 DLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp SEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred cEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 99999999999999875555667888889999888887655443
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=76.14 E-value=2.1 Score=30.02 Aligned_cols=25 Identities=8% Similarity=0.151 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
+...++++++.+.|+|||.+++...
T Consensus 302 ~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 302 RAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3357899999999999999988764
No 247
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=75.57 E-value=1 Score=30.80 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeec
Q 038113 23 EHCLKLFKKCYKSIPKDGMVIIVETIL 49 (112)
Q Consensus 23 ~~~~~iL~~~~~aL~pgg~l~i~e~~~ 49 (112)
++..+.|..+.+.|+|||++.|+-+..
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhs 248 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHS 248 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCc
Confidence 346789999999999999999998544
No 248
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=75.47 E-value=3.3 Score=28.56 Aligned_cols=25 Identities=8% Similarity=0.308 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 24 HCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
+..++++++.+.|+|||.+++....
T Consensus 250 ~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 250 HLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCcCcEEEEEECC
Confidence 3578999999999999998776543
No 249
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=73.58 E-value=1.9 Score=26.88 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=23.0
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
+|.. |+|++...+|.+++....++++++.+.+ | .++++
T Consensus 107 ~~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g-~~~~~ 145 (200)
T 1ne2_A 107 ISGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--M-WIYSI 145 (200)
T ss_dssp CCCCEEEEEECCCC-------CHHHHHHHHHHE--E-EEEEE
T ss_pred CCCCeeEEEECCCchhccCchhHHHHHHHHHhc--C-cEEEE
Confidence 3443 9999999999998755568899999987 4 44443
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=72.87 E-value=3.6 Score=28.76 Aligned_cols=21 Identities=14% Similarity=0.404 Sum_probs=18.3
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 038113 27 KLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e~ 47 (112)
.+++++.+.|+|||+++++-+
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEC
Confidence 679999999999999988754
No 251
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=72.64 E-value=2 Score=19.00 Aligned_cols=18 Identities=39% Similarity=0.678 Sum_probs=14.4
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 038113 25 CLKLFKKCYKSIPKDGMV 42 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l 42 (112)
|+.+++++....+.||++
T Consensus 4 cr~likriqa~ipk~grm 21 (34)
T 1ssz_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCSSSCCC
T ss_pred HHHHHHHHHHHccccchh
Confidence 577888888888888875
No 252
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=72.08 E-value=3.7 Score=27.92 Aligned_cols=37 Identities=5% Similarity=0.041 Sum_probs=26.1
Q ss_pred ccEEEeccccc---cCChH-HHHHHHHHHHhhCCCC-CEEEE
Q 038113 8 GDAIYMKWILH---DWSDE-HCLKLFKKCYKSIPKD-GMVII 44 (112)
Q Consensus 8 ~D~v~~~~vlh---~~~d~-~~~~iL~~~~~aL~pg-g~l~i 44 (112)
.|+|+.-...+ .|-|+ ....+|+.+.+.|+|| |.+++
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 39998766544 12233 2346789999999999 99887
No 253
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=72.03 E-value=9.4 Score=23.62 Aligned_cols=29 Identities=10% Similarity=0.015 Sum_probs=23.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhC
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSI 36 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL 36 (112)
.|+|++.-.+|.+......++++++.+.+
T Consensus 113 ~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 113 VDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 39999888888887554567899998887
No 254
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=69.19 E-value=2 Score=30.40 Aligned_cols=40 Identities=18% Similarity=0.261 Sum_probs=26.6
Q ss_pred CCc-ccEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEE
Q 038113 5 VAK-GDAIYMKWILHDWSDE-HCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 5 ~P~-~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~i 44 (112)
+|+ .|+++.-++-+.+-.+ ....++....+.|+|||+++-
T Consensus 146 lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 146 LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 464 4999764433333322 256788888899999998763
No 255
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=66.93 E-value=10 Score=24.02 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=24.6
Q ss_pred Cc-eecCHHHHHHHHHhcCCCeeEEEEeCCceEEEE
Q 038113 75 GG-KERTKHELMTLVTGAGFGGIRFESFICNLWVME 109 (112)
Q Consensus 75 ~g-~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie 109 (112)
+| ..-.-+|++++|+++||+.++.+ +.++.-|++
T Consensus 17 GG~nkv~MadLr~~l~~lGf~~V~Ty-I~SGNvvF~ 51 (183)
T 2hiy_A 17 GGKNKVVMAELRQELTNLGLEKVESY-INSGNIFFT 51 (183)
T ss_dssp C-CCCCCHHHHHHHHHHHTCEEEEEE-TTTTEEEEE
T ss_pred CCCCcccHHHHHHHHHHcCCccceEE-EecCCEEEe
Confidence 44 34578999999999999998754 555555554
No 256
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=65.85 E-value=5.8 Score=27.92 Aligned_cols=34 Identities=6% Similarity=0.117 Sum_probs=26.6
Q ss_pred cEEEeccccccCCh----HHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 9 DAIYMKWILHDWSD----EHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 9 D~v~~~~vlh~~~d----~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
|+|++. ||. ..+...|.++.+.|+|||.|++.-.
T Consensus 103 d~v~~~-----~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 103 DLVVLA-----LPAGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp EEEEEE-----CCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEE-----CCcchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 776654 552 3578999999999999999988763
No 257
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=65.72 E-value=1.7 Score=31.53 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=21.0
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.++|+++.+.|+|||+|+...+...
T Consensus 214 ~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 214 QEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhcCCCcEEEEEEeecc
Confidence 3899999999999999998776443
No 258
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=65.65 E-value=2 Score=28.89 Aligned_cols=38 Identities=11% Similarity=-0.064 Sum_probs=24.4
Q ss_pred CCcccEEEeccccccCChHHHHHHHHHH----------------HhhCCCCCEEE
Q 038113 5 VAKGDAIYMKWILHDWSDEHCLKLFKKC----------------YKSIPKDGMVI 43 (112)
Q Consensus 5 ~P~~D~v~~~~vlh~~~d~~~~~iL~~~----------------~~aL~pgg~l~ 43 (112)
+|..|+++. +.-++|+.+....+|.+. +.+++|||+++
T Consensus 91 ~~~fD~vv~-nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 91 LPFFDTCVA-NLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCCCSEEEE-ECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred chhhcEEEE-ecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 343487766 655667766666666432 36899999753
No 259
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=64.99 E-value=2.8 Score=29.47 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=22.9
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCC
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLP 53 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~ 53 (112)
.+||+++.+.|+|||+|+-....+....
T Consensus 264 ~~iL~~a~~~lkpGG~LVYsTCSl~~~E 291 (359)
T 4fzv_A 264 VQLLAAGLLATKPGGHVVYSTCSLSHLQ 291 (359)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCCTTT
T ss_pred HHHHHHHHhcCCCCcEEEEEeCCCchhh
Confidence 5799999999999999988877665443
No 260
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=63.17 E-value=3 Score=24.04 Aligned_cols=29 Identities=10% Similarity=0.069 Sum_probs=23.3
Q ss_pred CceecCHHHHHHHHHhcCCCeeEEEEeCC
Q 038113 75 GGKERTKHELMTLVTGAGFGGIRFESFIC 103 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 103 (112)
-|...+.+++.+.|.+.||+.+.....+|
T Consensus 19 ~G~~i~~~~l~~~L~~~GY~r~~~v~~~G 47 (106)
T 3fpn_B 19 VGMEIERNALLRRLVDIQYDRNDIDFRRG 47 (106)
T ss_dssp TTCBCCHHHHHHHHHHTTCEECTTCCCTT
T ss_pred CCCCcCHHHHHHHHHHcCCEECCccCCcE
Confidence 67788999999999999998876544433
No 261
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=62.80 E-value=6.5 Score=20.53 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=16.5
Q ss_pred cCHHHHHHHHHhcCCCeeE
Q 038113 79 RTKHELMTLVTGAGFGGIR 97 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~ 97 (112)
.+..|+.++|++.||..++
T Consensus 5 ~~~~elik~L~~~G~~~~r 23 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERM 23 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHCCCEEeC
Confidence 4788999999999998764
No 262
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=61.77 E-value=3.3 Score=27.93 Aligned_cols=20 Identities=15% Similarity=0.524 Sum_probs=17.5
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 038113 26 LKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~ 45 (112)
..+++++++.|+|||.+++.
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 46889999999999999775
No 263
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=60.54 E-value=5.9 Score=27.77 Aligned_cols=23 Identities=4% Similarity=0.125 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEe
Q 038113 24 HCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
....++.++.+.|+|||.+++..
T Consensus 317 ~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 317 GYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEe
Confidence 36789999999999999998865
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=60.10 E-value=2.7 Score=30.10 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=19.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEee
Q 038113 26 LKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
...++++.+.|+|||++.++-+
T Consensus 287 ~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 287 LNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCEEEEEEC
Confidence 4789999999999999988764
No 265
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=59.45 E-value=26 Score=24.47 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=30.5
Q ss_pred CCCcc-cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 4 NVAKG-DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 4 ~~P~~-D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
+.|.. |++++..- =+..+....|+.+...|+||+++++....
T Consensus 96 ~~~~~~~~v~~~lp---k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 96 DYPQQPGVVLIKVP---KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp CCCSSCSEEEEECC---SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred ccccCCCEEEEEcC---CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 34543 88776433 13466889999999999999999887653
No 266
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=57.94 E-value=5.2 Score=28.34 Aligned_cols=24 Identities=8% Similarity=0.346 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeee
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
-.++++.+.+.|+|||.|+++...
T Consensus 305 ~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 305 LVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECC
Confidence 358999999999999999977653
No 267
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=57.09 E-value=27 Score=20.46 Aligned_cols=47 Identities=15% Similarity=0.260 Sum_probs=32.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEE
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 98 (112)
.+|+.++. +++.|.++.|.-++..... .+..+..+++.+.||..+++
T Consensus 7 ~qivd~il-~~~egtri~iLAPvv~~rK-------------------------g~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 7 EQMVDRLL-SYPERTKMQILAPIVSGKK-------------------------GTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHH-TSCTTCEEEEEEEEEEEEC-------------------------SCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-hCCCCCEEEEEEEEeeCCC-------------------------CcHHHHHHHHHhCCCeEEEE
Confidence 45666666 4788999999888764332 13446677777888887765
No 268
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=56.25 E-value=29 Score=20.54 Aligned_cols=47 Identities=11% Similarity=0.270 Sum_probs=31.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEE
Q 038113 26 LKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 98 (112)
.+|+.++. +++.|.++.|.-++.... ..+..+..++|.+.||..+++
T Consensus 9 ~qivd~il-~~~egtki~iLAPvv~~r-------------------------Kg~~~~ll~~l~~~Gf~Rvrv 55 (126)
T 4dfc_B 9 SQMVDNVL-SQPEGKRLMLLAPIIKER-------------------------KGEHTKTLENLASQGYIRARI 55 (126)
T ss_dssp HHHHHHTT-SSCTTCCEEEEEEEEEEE-------------------------ESCCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH-hCCCCCEEEEEeEEEeCC-------------------------CCcHHHHHHHHHhCCCeEEEE
Confidence 45666666 477899998887775432 123456677777788887765
No 269
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=55.53 E-value=6.2 Score=17.74 Aligned_cols=18 Identities=39% Similarity=0.678 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 038113 25 CLKLFKKCYKSIPKDGMV 42 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l 42 (112)
|..+++++-...+.||++
T Consensus 4 Crtlikriq~vIPk~~r~ 21 (34)
T 2dwf_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHhhcCCcccc
Confidence 567888888877777554
No 270
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=54.35 E-value=4.3 Score=20.85 Aligned_cols=20 Identities=20% Similarity=0.358 Sum_probs=16.1
Q ss_pred CHHHHHHHHHhcCCCeeEEE
Q 038113 80 TKHELMTLVTGAGFGGIRFE 99 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~ 99 (112)
-..+|+++|.++|.+..++.
T Consensus 34 ~pp~W~~ll~~sGIt~~e~k 53 (59)
T 1cee_B 34 LDPDLRSLFSRAGISEAQLT 53 (59)
T ss_dssp CCHHHHHHHTTTTSCSSCCC
T ss_pred CCHHHHHHHHHcCCCHHHHh
Confidence 36799999999999876543
No 271
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=51.37 E-value=10 Score=22.35 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=26.2
Q ss_pred eccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 13 MKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 13 ~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
+..-+|-|..+|..++++++.+. ...|.++-+|
T Consensus 63 lG~el~~WKp~eVdkm~~k~~q~-~~dGl~iYCD 95 (126)
T 2rbg_A 63 IGYELFLWKKNEVDIFLKNLEKS-EVDGLLVYCD 95 (126)
T ss_dssp SEEEEEEECGGGHHHHHHHHTTC-CCCEEEEEEC
T ss_pred cceEEEEeCHHHHHHHHHHHHHh-CCCceEEEeC
Confidence 34456789999999999998886 7888887665
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=51.01 E-value=4.2 Score=27.86 Aligned_cols=21 Identities=10% Similarity=0.464 Sum_probs=18.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e 46 (112)
.+.++.|+++|+|||.++..-
T Consensus 178 ~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 178 SAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEec
Confidence 468999999999999998753
No 273
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=50.47 E-value=8 Score=24.30 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=19.5
Q ss_pred CceecCHHHHHHHHHhcCCCeeE
Q 038113 75 GGKERTKHELMTLVTGAGFGGIR 97 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~ 97 (112)
+....|.+|+.+.|++.||.+.+
T Consensus 31 ~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 31 SAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred hCCCCCHHHHHHHHHHcCCCcCc
Confidence 45667999999999999999764
No 274
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=50.40 E-value=26 Score=24.31 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEe
Q 038113 81 KHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~ 101 (112)
.+.+.+.+++.||+..+...+
T Consensus 332 ~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 332 KKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEE
Confidence 345567888899998887766
No 275
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=49.58 E-value=5.7 Score=27.88 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=25.7
Q ss_pred cEEEecccc-----ccCCh--HHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWIL-----HDWSD--EHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vl-----h~~~d--~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++---. +...+ +...++++.+.+.|+|||.+++..
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 888873211 12222 235678999999999999998765
No 276
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=49.45 E-value=6.9 Score=26.77 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 038113 25 CLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~ 45 (112)
...+|+.+++.|+|||.+++.
T Consensus 63 l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 63 FLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHCcCCcEEEEE
Confidence 568899999999999999885
No 277
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=48.91 E-value=23 Score=18.23 Aligned_cols=20 Identities=15% Similarity=0.034 Sum_probs=16.8
Q ss_pred cCHHHHHHHHHhcCCCeeEE
Q 038113 79 RTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~ 98 (112)
.+.++-+++|+++||+....
T Consensus 16 ~~~~~A~~~L~~~Gl~~~~~ 35 (71)
T 3ouv_A 16 QTVDVAQKNMNVYGFTKFSQ 35 (71)
T ss_dssp CBHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 57889999999999987644
No 278
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=48.80 E-value=5 Score=21.11 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=13.9
Q ss_pred HHHHHHHHHhcCCCeeE
Q 038113 81 KHELMTLVTGAGFGGIR 97 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~ 97 (112)
..||+++|+.+|.+..+
T Consensus 24 p~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 24 DPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CTTHHHHHHHHTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 46999999999988543
No 279
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=46.25 E-value=37 Score=18.85 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe-CCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF-ICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~ 110 (112)
-|++++++++.+.| .+.++.-. ..+++.||.
T Consensus 19 ~te~~L~~lF~q~G-~V~~~~l~~~kGfaFVey 50 (89)
T 2wbr_A 19 IDGPTLRTLCMQHG-PLVSFHPYLNQGIALCKY 50 (89)
T ss_dssp CCCHHHHHHHHHHS-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHhhC-CEEEEEEcCCCcEEEEEE
Confidence 47899999999999 77776644 357888775
No 280
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=44.39 E-value=25 Score=23.71 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=31.6
Q ss_pred cccEEEeccccccCC--hHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 7 KGDAIYMKWILHDWS--DEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~--d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
++|.+++...|-.+. .--+..++..+.+++.|.|.|++=-.
T Consensus 31 ~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~ 73 (268)
T 3ijw_A 31 KGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQ 73 (268)
T ss_dssp TTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred CCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 468888877776555 23478999999999999999987654
No 281
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=44.05 E-value=40 Score=18.56 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=22.6
Q ss_pred ecCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 78 ERTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
.-|+++++++|.+.| .+..+.-...+++.|++
T Consensus 26 ~~t~~~l~~~F~~~G-~i~~~~i~~~g~afV~f 57 (108)
T 1x4c_A 26 SGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 57 (108)
T ss_dssp SCCHHHHHHHHGGGS-CEEEEEEETTTEEEEEE
T ss_pred CCCHHHHHHHHHhcC-CEeEEEEecCCEEEEEE
Confidence 358999999999998 55554433336777765
No 282
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=43.10 E-value=43 Score=22.37 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=24.3
Q ss_pred cCChHHHHHHHHHHHhhC-------------CCCCEEEEEeeecCCC
Q 038113 19 DWSDEHCLKLFKKCYKSI-------------PKDGMVIIVETILPKL 52 (112)
Q Consensus 19 ~~~d~~~~~iL~~~~~aL-------------~pgg~l~i~e~~~~~~ 52 (112)
++|.+-..+.+++....+ .|||.-+|+|...+..
T Consensus 60 nmPkd~IerAIkk~~G~~~~~~~eei~YEgyGPgGvaiiVe~lTDN~ 106 (249)
T 1lfp_A 60 NMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNR 106 (249)
T ss_dssp TCCHHHHHHHHHHHHSCSSSCCCEEEEEEEEETTTEEEEEEEEESCH
T ss_pred CCCHHHHHHHHHHhcCCCcccceEEEEEEEECCCceEEEEEEecCCH
Confidence 456666677777765432 3999999999888753
No 283
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=42.88 E-value=7.3 Score=26.73 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=26.4
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
|+|++.- + ....++++.+.+.|+|||.+++.+....
T Consensus 260 D~Vi~dp-----P-~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 260 NRVIMNL-----P-KFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEEEECC-----T-TTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred cEEEECC-----c-HhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 7777631 1 1134799999999999999999887554
No 284
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=41.99 E-value=12 Score=23.75 Aligned_cols=21 Identities=14% Similarity=0.297 Sum_probs=16.6
Q ss_pred CceecCHHHHHHHHHhcCCCe
Q 038113 75 GGKERTKHELMTLVTGAGFGG 95 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~ 95 (112)
+....|.+|+.+.|++.||.+
T Consensus 44 ~~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 44 EERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp HTCCCSHHHHHHHHHHTTCTT
T ss_pred hCCcCCHHHHHHHHHHCCCcc
Confidence 344568888888888888887
No 285
>3aaf_A Werner syndrome ATP-dependent helicase; helix-turn-helix, winged-helix, protein-DNA complex, DNA-BIN helicase; HET: DNA; 1.90A {Homo sapiens} PDB: 2axl_A
Probab=41.55 E-value=13 Score=22.22 Aligned_cols=70 Identities=16% Similarity=0.057 Sum_probs=41.2
Q ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHh---cCCCe
Q 038113 19 DWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTG---AGFGG 95 (112)
Q Consensus 19 ~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~---aGf~~ 95 (112)
|+++ ++.++|+.+++.=..-|.-.|+|...+..... .. .. ++.. ...+-|+..+..+|++++++ .||=.
T Consensus 13 D~T~-~AqkiLs~V~r~~~rfG~~~iidvLrGs~~~k--i~--~~-~~~l--~tfGigk~~s~~~w~~lirqLi~~G~L~ 84 (134)
T 3aaf_A 13 DFGP-QAFKLLSAVDILGEKFGIGLPILFLRGSNSQR--LA--DQ-YRRH--SLFGTGKDQTESWWKAFSRQLITEGFLV 84 (134)
T ss_dssp ECHH-HHHHHHHHHHHTTTCSCTHHHHHHHTTCCCTT--SC--GG-GGGS--TTTTTTTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CchH-HHHHHHHHHHHHcCcccccchhhhhcCCcHHH--HH--HH-hCCC--CccCCCCCCCHHHHHHHHHHHHHcCCce
Confidence 4443 47899999988522236666777666554221 10 11 2221 22335788999999998875 47544
Q ss_pred e
Q 038113 96 I 96 (112)
Q Consensus 96 ~ 96 (112)
.
T Consensus 85 ~ 85 (134)
T 3aaf_A 85 E 85 (134)
T ss_dssp E
T ss_pred e
Confidence 3
No 286
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=41.39 E-value=29 Score=20.25 Aligned_cols=28 Identities=14% Similarity=0.192 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHhhCC---CC-CEEEEEee
Q 038113 20 WSDEHCLKLFKKCYKSIP---KD-GMVIIVET 47 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~---pg-g~l~i~e~ 47 (112)
.+|+++.++++.+.++.+ +| |++++.+-
T Consensus 65 V~de~ve~Vv~~I~~~a~TG~~GDGkIFV~~V 96 (118)
T 3t9z_A 65 VSDDAVDEVVEAIVSSARTGKFGDGRIFVIPV 96 (118)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EChHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 467778888888888877 44 99998863
No 287
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=41.24 E-value=29 Score=20.27 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=21.5
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 20 WSDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
.+|+++.++++.+.++.+. | |++++.+-
T Consensus 65 V~de~ve~vv~~I~~~a~TG~~GDGkIFV~~V 96 (119)
T 3ncq_A 65 VKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPV 96 (119)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCCEEEEEEh
Confidence 4677788888888887774 4 99998863
No 288
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=41.10 E-value=42 Score=18.81 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=21.4
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
-|+++++++|++.| .+..+.-...+++.|++
T Consensus 28 ~t~~~l~~~F~~~G-~v~~~~i~~~g~afV~f 58 (115)
T 3beg_B 28 GSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 58 (115)
T ss_dssp CCTTHHHHHHGGGS-CEEEEEECTTSEEEEEE
T ss_pred CCHHHHHHHHHhcC-CeEEEEEecCCEEEEEE
Confidence 47889999999988 55554433336777765
No 289
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=41.03 E-value=30 Score=23.35 Aligned_cols=39 Identities=10% Similarity=0.289 Sum_probs=30.6
Q ss_pred cccEEEeccccccCC--hHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 7 KGDAIYMKWILHDWS--DEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~--d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
++|.+++...|-.+. .-.+..++..+.+++.|.|.|++=
T Consensus 29 ~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmP 69 (273)
T 2nyg_A 29 KGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMP 69 (273)
T ss_dssp TTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEe
Confidence 468888877666655 334789999999999999999883
No 290
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=40.50 E-value=31 Score=19.76 Aligned_cols=27 Identities=15% Similarity=0.231 Sum_probs=20.4
Q ss_pred CChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 038113 20 WSDEHCLKLFKKCYKSIPK----DGMVIIVE 46 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~p----gg~l~i~e 46 (112)
.+|++..++++.+.++++. +|++++.+
T Consensus 65 v~de~v~~vv~~I~~~~~tg~~GdGkiFV~p 95 (116)
T 1vfj_A 65 VSEPFVKPTVEAILKAARTGEVGDGKIFVLP 95 (116)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 3677788888888887775 47888875
No 291
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=40.34 E-value=11 Score=28.80 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEe
Q 038113 24 HCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
.-.++++++.+.|+|||.|++..
T Consensus 635 ~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 635 DHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEE
Confidence 46789999999999999998654
No 292
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=40.33 E-value=48 Score=18.52 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEe-CCceEE
Q 038113 81 KHELMTLVTGAGFGGIRFESF-ICNLWV 107 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~-~~~~~v 107 (112)
..++.+|+++.|+++...... ++.+.+
T Consensus 66 ~~dI~~~~~~~G~~v~~~e~~~~g~~~i 93 (98)
T 1jdq_A 66 KERIPETVKKLGHEVLEIEEVGPSEWKI 93 (98)
T ss_dssp HHHHHHHHHHSSCCEEEEEECSSSCEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEecCCEEEE
Confidence 567889999999999877665 344433
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=39.73 E-value=8.5 Score=27.37 Aligned_cols=20 Identities=15% Similarity=0.208 Sum_probs=17.2
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 038113 26 LKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~ 45 (112)
.+.++.|+++|+|||.++..
T Consensus 311 ~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 311 RLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEe
Confidence 57889999999999988664
No 294
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=39.53 E-value=18 Score=19.72 Aligned_cols=19 Identities=5% Similarity=0.008 Sum_probs=15.3
Q ss_pred CHHHHHHHHHhcCCCeeEE
Q 038113 80 TKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~ 98 (112)
-..+|+++|..+|.+..++
T Consensus 30 lP~eW~~ll~~sGIs~~e~ 48 (80)
T 1f3m_A 30 MPEQWARLLQTSNITKSEQ 48 (80)
T ss_dssp CCHHHHHHHHTSCCCHHHH
T ss_pred CCHHHHHHHHHcCCCHHHH
Confidence 3579999999999886543
No 295
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=39.29 E-value=33 Score=19.78 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHh-hCCC-CCEEEEEee
Q 038113 21 SDEHCLKLFKKCYK-SIPK-DGMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~-aL~p-gg~l~i~e~ 47 (112)
+|+.+.+++..+.+ +++. +|.+++.|.
T Consensus 69 ~de~vd~vv~~I~~~~~t~~~G~ifVsdV 97 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFTDYAGIIYICEA 97 (111)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEEEEe
Confidence 47889999999854 5554 588888775
No 296
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=39.26 E-value=33 Score=19.81 Aligned_cols=27 Identities=7% Similarity=0.196 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEe
Q 038113 20 WSDEHCLKLFKKCYKSIPK---D-GMVIIVE 46 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e 46 (112)
.+|+++.+++..+.++.+. | |++++.+
T Consensus 68 V~d~~ve~vv~~I~~~a~tg~~GDGkIFV~~ 98 (115)
T 3l7p_A 68 AHDAAVEEMITTISQAVKTGEVGDGKIFVSP 98 (115)
T ss_dssp ECGGGHHHHHHHHHHHHCCC----CEEEEEE
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence 4677788888888888775 3 8998876
No 297
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=39.13 E-value=39 Score=23.22 Aligned_cols=30 Identities=7% Similarity=-0.238 Sum_probs=20.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 81 KHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
...+++-|++|||++.++-..++-.-.+.+
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIGRKRKGTVA 257 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC---CEEEEE
T ss_pred cHHHHHHHHHCCCEEEecCCCCCCCceeEE
Confidence 468899999999999887665554444444
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=39.07 E-value=13 Score=24.45 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=18.0
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 038113 25 CLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~ 45 (112)
....|+.+++.|+|||.++|.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEE
Confidence 467888899999999998876
No 299
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=38.61 E-value=37 Score=23.18 Aligned_cols=42 Identities=10% Similarity=0.104 Sum_probs=33.0
Q ss_pred cccEEEeccccccCCh--HHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 7 KGDAIYMKWILHDWSD--EHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d--~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
++|.+++...|-.+.- -.+..++..+.+++.|.|.|++=-+.
T Consensus 38 ~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 38 PGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp TTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 4688888887777662 23678999999999999999886543
No 300
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=38.39 E-value=28 Score=19.94 Aligned_cols=27 Identities=15% Similarity=0.347 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
+|+++.++++.+.++.+. | |++++.+-
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkIfV~~v 96 (112)
T 3mhy_A 66 SDDQYEQVVEAIQKAANTGRIGDGKIFVLDI 96 (112)
T ss_dssp CTTTHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 566677777777777764 4 89988763
No 301
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=38.28 E-value=19 Score=20.57 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=16.9
Q ss_pred cCHHHHHHHHHhcCCCeeEE
Q 038113 79 RTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~ 98 (112)
-+.+|.++||++.||....+
T Consensus 24 Ssp~EV~~WL~~kgFS~~tv 43 (99)
T 1wwu_A 24 SGPDEVRAWLEAKAFSPRIV 43 (99)
T ss_dssp CCHHHHHHHHHHHTCCTTHH
T ss_pred CCHHHHHHHHHHcCCCHHHH
Confidence 37899999999999997543
No 302
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=37.95 E-value=19 Score=20.79 Aligned_cols=17 Identities=24% Similarity=0.409 Sum_probs=14.2
Q ss_pred HHHHHHHHHhcCCCeeE
Q 038113 81 KHELMTLVTGAGFGGIR 97 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~ 97 (112)
..+|+++|+.+|.+..+
T Consensus 23 ppeWk~LL~~aGITe~e 39 (107)
T 1ej5_A 23 DPDLRSLFSRAGISEAQ 39 (107)
T ss_dssp CHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 57999999999987543
No 303
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=37.62 E-value=28 Score=20.01 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK----DGMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p----gg~l~i~e~ 47 (112)
+|++..++++.+.++++. +|++++.+-
T Consensus 70 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 100 (116)
T 2ns1_B 70 ADDQLDEVIDIVSKAAYTGKIGDGKIFVAEL 100 (116)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 567778888888887775 488888764
No 304
>1pc6_A Protein NINB; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.51A {Enterobacteria phage lambda} SCOP: d.262.1.1
Probab=37.39 E-value=69 Score=19.40 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=18.7
Q ss_pred CceecCHHHHHHHHHhcCCCeeEEEE
Q 038113 75 GGKERTKHELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~~~~ 100 (112)
.|+.++.++|+++|... |...++.+
T Consensus 63 ~G~~~~~e~wK~~~~~~-~~~~~~~~ 87 (146)
T 1pc6_A 63 HGRWLDAESWKCVFTAA-LKQQDVVP 87 (146)
T ss_dssp TTBCCCHHHHHHHHHHH-HSCCEEEE
T ss_pred cCCcCCHHHHHHHHHHH-hccceeEe
Confidence 78889999999999743 44455555
No 305
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=37.18 E-value=30 Score=20.05 Aligned_cols=28 Identities=11% Similarity=0.169 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 20 WSDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
.+|+++.++++.+.++.+. | |++++.+-
T Consensus 65 V~d~~ve~vv~~I~~~a~Tg~~GDGkIFV~~V 96 (116)
T 4aff_A 65 VEDAQVDTVIDKIVAAARTGENGDGKIFVSPV 96 (116)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCEEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 3677788888888888774 4 88888763
No 306
>3qoe_A Heterocyst differentiation protein; MCSG, PSI biology, structural genomics, midwest center for S genomics, helix-turn-helix; 3.00A {Fischerella thermalis} PDB: 3qod_A
Probab=36.83 E-value=6.1 Score=26.24 Aligned_cols=29 Identities=7% Similarity=0.188 Sum_probs=24.9
Q ss_pred ccccccCChHHHHHHHHHHHhhCCCCCEE
Q 038113 14 KWILHDWSDEHCLKLFKKCYKSIPKDGMV 42 (112)
Q Consensus 14 ~~vlh~~~d~~~~~iL~~~~~aL~pgg~l 42 (112)
..-|||+....+..|..+++++|..|..|
T Consensus 67 TGHLHHiEPKRVKvIVeEvrqaltegklL 95 (302)
T 3qoe_A 67 TGHLHHLEPKRVKAIVEEVRQALTEGKLL 95 (302)
T ss_dssp HHHHTTCCHHHHHHGGGTTTCSSSSCCCC
T ss_pred eccccccCchhhhhHHHHHHHHHhhhhHH
Confidence 34589999998999999999999998765
No 307
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=36.38 E-value=30 Score=22.06 Aligned_cols=30 Identities=7% Similarity=0.295 Sum_probs=21.6
Q ss_pred ccCC-hHHHHHHHHHHHhhCCCCCEEEEEee
Q 038113 18 HDWS-DEHCLKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 18 h~~~-d~~~~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
.+|. .....++.+++.+.+++|+.+++.|.
T Consensus 127 ~Dw~~~~~~~~i~~~v~~~~~~g~IiL~Hd~ 157 (216)
T 2c71_A 127 NDWIPSTTAEQRAAAVINGVRDGTIILLHDV 157 (216)
T ss_dssp STTCTTSCHHHHHHHHHHHCCTTBEEEEESC
T ss_pred ccccCCCCHHHHHHHHHhcCCCCcEEEEECC
Confidence 3565 44467888888888999987766654
No 308
>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1
Probab=36.07 E-value=51 Score=17.58 Aligned_cols=25 Identities=16% Similarity=0.007 Sum_probs=21.2
Q ss_pred eecCHHHHHHHHHhcCCCeeEEEEe
Q 038113 77 KERTKHELMTLVTGAGFGGIRFESF 101 (112)
Q Consensus 77 ~~rt~~e~~~ll~~aGf~~~~~~~~ 101 (112)
|..+.++|.++|..++-+++.....
T Consensus 38 R~i~r~~w~~~L~~a~C~IlS~~sn 62 (72)
T 1mhm_B 38 RSLSKAQLDEILGPAECTIVDNLSN 62 (72)
T ss_dssp GGCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred ccCCHHHHHHHHhhcCCEEEEEecC
Confidence 4458999999999999999887764
No 309
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=35.90 E-value=48 Score=18.01 Aligned_cols=23 Identities=30% Similarity=0.361 Sum_probs=16.8
Q ss_pred cCHHHHHHHHH----hcCCCeeEEEEe
Q 038113 79 RTKHELMTLVT----GAGFGGIRFESF 101 (112)
Q Consensus 79 rt~~e~~~ll~----~aGf~~~~~~~~ 101 (112)
++.+|-.++.+ ++||.+.++.|-
T Consensus 54 ~sLdEAlE~AE~eYeeaGF~V~RVRPe 80 (84)
T 2lmc_A 54 ETLDEALELAEWQYVPAGFEVTRVRPC 80 (84)
T ss_dssp SSHHHHHHHHHHTTGGGTCEEEEEEEE
T ss_pred ccHHHHHHHHHHHhhhccceEEEeccc
Confidence 46666555555 789999998875
No 310
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=35.66 E-value=16 Score=15.09 Aligned_cols=16 Identities=13% Similarity=0.133 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhhCCCC
Q 038113 24 HCLKLFKKCYKSIPKD 39 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pg 39 (112)
+.++-|+++++.|++|
T Consensus 12 dlqerlrklrkklrsg 27 (27)
T 3twe_A 12 DLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhcCC
Confidence 4566677777776654
No 311
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=35.23 E-value=41 Score=19.05 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=20.0
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 038113 21 SDEHCLKLFKKCYKSIPK----DGMVIIVE 46 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p----gg~l~i~e 46 (112)
+|++..++++.+.+++.. +|++++.+
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~~ 95 (112)
T 1hwu_A 66 DDKVVEQAVDAIIKAARTGKIGDGKIFVQE 95 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 677788888888887775 38888875
No 312
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=35.20 E-value=41 Score=19.07 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
+|++..++++.+.++++. | |++++.+-
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (112)
T 2eg2_A 66 RDEDVEKVVETIVKTAQTGRVGDGKIFIIPV 96 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 677778888888877764 3 78888763
No 313
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=34.94 E-value=61 Score=18.31 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=20.3
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe---CCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF---ICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~---~~~~~vie~ 110 (112)
-|+++++++|++.|..+..+.-. ..+++.|++
T Consensus 40 ~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F 74 (111)
T 2jvr_A 40 CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEF 74 (111)
T ss_dssp CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEE
T ss_pred CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEE
Confidence 37888999999988644433221 235666665
No 314
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=34.01 E-value=26 Score=16.56 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=13.6
Q ss_pred CHHHHHHHHHhcCCCe
Q 038113 80 TKHELMTLVTGAGFGG 95 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~ 95 (112)
+.+++.+.++++||+.
T Consensus 50 ~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 50 TQDLIKEALLDAGQEV 65 (66)
T ss_dssp CHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHcCCCc
Confidence 6788899999999975
No 315
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=33.46 E-value=49 Score=19.42 Aligned_cols=25 Identities=8% Similarity=-0.041 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHhhCCCCC-EEEEE
Q 038113 21 SDEHCLKLFKKCYKSIPKDG-MVIIV 45 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~pgg-~l~i~ 45 (112)
+|+++.+++..+.++.+.|. +++|.
T Consensus 86 ~d~~ve~vv~aI~~~a~tg~IKIfV~ 111 (120)
T 3ce8_A 86 PAAQQAALLTALALVCKHNPCRYWIM 111 (120)
T ss_dssp EGGGHHHHHHHHHHHTTTSCCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 67788999999999987776 44443
No 316
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=33.07 E-value=31 Score=18.53 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=15.6
Q ss_pred cCHHHHHHHHHhcCCCee
Q 038113 79 RTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~ 96 (112)
.+.+++.+-|+++||+++
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 477899999999999875
No 317
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=32.59 E-value=18 Score=24.72 Aligned_cols=22 Identities=9% Similarity=0.246 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhhCCCCCEEEEE
Q 038113 24 HCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 24 ~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
.....|..+++.|+|||.++|.
T Consensus 84 ~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 84 WAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEE
Confidence 3567888999999999999885
No 318
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=32.51 E-value=43 Score=16.89 Aligned_cols=22 Identities=27% Similarity=0.335 Sum_probs=18.5
Q ss_pred CceecCHHHHHHHHHhcCCCee
Q 038113 75 GGKERTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~ 96 (112)
.|...|.+.+.++++.+|-++.
T Consensus 13 ~g~~~t~~~I~~il~aaGveve 34 (58)
T 3a1y_A 13 VGKEINEENLKAVLQAAGVEPE 34 (58)
T ss_dssp TTCCCCHHHHHHHHHHTTCCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCcc
Confidence 5678899999999999997653
No 319
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=38.37 E-value=9.6 Score=27.55 Aligned_cols=46 Identities=13% Similarity=-0.004 Sum_probs=33.8
Q ss_pred cccEEEecccc--ccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 7 KGDAIYMKWIL--HDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 7 ~~D~v~~~~vl--h~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
++|+++.+.-= -+.+--++.+-+.++..++++||.++++-.+.+.-
T Consensus 276 ~~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~g~ 323 (436)
T 2yjg_A 276 PADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECADGH 323 (436)
Confidence 35888877531 23344556889999999999999999988776543
No 320
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=32.02 E-value=24 Score=21.54 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=14.9
Q ss_pred eecCHHHHHHHHHhcCCCee
Q 038113 77 KERTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 77 ~~rt~~e~~~ll~~aGf~~~ 96 (112)
...|.+|+.+.|++.||.+.
T Consensus 18 ~~~tq~eL~~~L~~~G~~Vt 37 (149)
T 1b4a_A 18 DIETQDELVDRLREAGFNVT 37 (149)
T ss_dssp CCCSHHHHHHHHHHTTCCCC
T ss_pred CCccHHHHHHHHHHcCCCcC
Confidence 44578888888888888754
No 321
>2cw5_A Bacterial fluorinating enzyme homolog; alpha and beta protein (A/B), beta barrel, structural genomics, NPPSFA; 1.94A {Thermus thermophilus}
Probab=31.53 E-value=1.1e+02 Score=20.49 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=35.9
Q ss_pred CCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE-EEeeecCCC
Q 038113 5 VAKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVI-IVETILPKL 52 (112)
Q Consensus 5 ~P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~-i~e~~~~~~ 52 (112)
.|++.++=++|-+--++-.++.-+|.++++..++|...+ ++|+-...+
T Consensus 28 ~p~~~IvDitH~I~p~~i~~aa~~L~~~~~yfP~gTVhv~VVDPGVGt~ 76 (255)
T 2cw5_A 28 APGPAVVDLAHALPPQDLRRAAYALFEALPYLPEGAVVLAVVDPGVGTA 76 (255)
T ss_dssp CCCCCEEEEESCSCTTCHHHHHHHHHHHGGGSCTTCEEEEECCTTTTSS
T ss_pred CcCCeEEEecCCCCCcCHHHHHHHHHHhhccCCCCCEEEEEECCCCCCC
Confidence 355667777777767777889999999999999998766 566544444
No 322
>2zbv_A Uncharacterized conserved protein; NPPSFA, national project protein structural and functional analyses; HET: ADN; 2.05A {Thermotoga maritima} PDB: 2zbu_A*
Probab=31.42 E-value=96 Score=20.77 Aligned_cols=47 Identities=6% Similarity=0.147 Sum_probs=35.1
Q ss_pred CcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE-EEeeecCCC
Q 038113 6 AKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVI-IVETILPKL 52 (112)
Q Consensus 6 P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~-i~e~~~~~~ 52 (112)
|++.++=++|-+--++-.++.-+|.++++..++|...+ ++|+-...+
T Consensus 27 p~~~IvDitH~I~p~~i~~aa~~L~~~~~yfP~gTVhv~VVDPGVGt~ 74 (263)
T 2zbv_A 27 PSAEIIDITHEVEPFNVRKASHVLYRASLDFPPSTVFLVVVDYGVGTS 74 (263)
T ss_dssp TTCCEEEEESCSCTTCHHHHHHHHHHHHTTSCTTCEEEEECCTTTTSS
T ss_pred cCCeEEEecCCCCCcCHHHHHHHHHHhhccCCCCCEEEEEECCCCCCC
Confidence 55567767776666777889999999999999998766 667655444
No 323
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.20 E-value=16 Score=20.83 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=16.2
Q ss_pred cCHHHHHHHHHhcCCCeeE
Q 038113 79 RTKHELMTLVTGAGFGGIR 97 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~ 97 (112)
-+.+|.++||++.||....
T Consensus 34 Ssp~EV~~WL~~kgFS~~t 52 (99)
T 2e8m_A 34 STPEDVKTWLQSKGFNPVT 52 (99)
T ss_dssp CCTTHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHcCCCHHH
Confidence 3788999999999998753
No 324
>3q7r_A Transcriptional regulatory protein; CHXR, receiver domain, transcription factor, OMPR, chlamydia transcription; 1.60A {Chlamydia trachomatis} PDB: 3q7s_A* 3q7t_A
Probab=31.16 E-value=59 Score=18.80 Aligned_cols=24 Identities=13% Similarity=0.272 Sum_probs=15.2
Q ss_pred CCcc-cEEEeccccccCChHHHHHHHHH
Q 038113 5 VAKG-DAIYMKWILHDWSDEHCLKLFKK 31 (112)
Q Consensus 5 ~P~~-D~v~~~~vlh~~~d~~~~~iL~~ 31 (112)
++.+ |++++..++ ++|.+.++|.+
T Consensus 70 ~~~~~dliVLfD~F---~EEa~v~vLd~ 94 (121)
T 3q7r_A 70 SLEGSFVLVLLDFF---DEETSVDLLDR 94 (121)
T ss_dssp TCCSCEEEEEESSC---CHHHHHHHHHT
T ss_pred CCCcccEEEEehhh---chHHHHHHHhC
Confidence 4444 888776664 56666666654
No 325
>2gw8_A PII signal transduction protein; transcriptional regulation, neisse structural genomics, oxford protein production facility; 1.85A {Neisseria meningitidis}
Probab=30.59 E-value=41 Score=19.15 Aligned_cols=27 Identities=7% Similarity=0.204 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
+|++..++++.+.+++.. | |++++.+-
T Consensus 68 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 2gw8_A 68 ADDAVERAIDVIVEVARSGKIGDGKIFVLPV 98 (114)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 566677888888877664 4 88888764
No 326
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=30.20 E-value=78 Score=17.90 Aligned_cols=30 Identities=13% Similarity=0.005 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCC---ceEEEEE
Q 038113 81 KHELMTLVTGAGFGGIRFESFIC---NLWVMEF 110 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~---~~~vie~ 110 (112)
..|+.+.|+++|.+.-++...+. .+.++|+
T Consensus 26 WPEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 26 WPELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp CHHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred CHHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 35889999999999999887753 4777775
No 327
>4e8u_A Putative uncharacterized protein T8P19.180; XS domain, RNA binding protein, RNA directed DNA methylation; 2.70A {Arabidopsis thaliana}
Probab=29.90 E-value=62 Score=20.34 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=24.5
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCC-----ceEEEEEE
Q 038113 80 TKHELMTLVTGAGFGGIRFESFIC-----NLWVMEFY 111 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~-----~~~vie~~ 111 (112)
+-.++++-|+.+||...++.++.+ +.+|+++.
T Consensus 34 s~~~l~~~~~~~~F~p~kv~~l~~~~Gh~g~aIv~F~ 70 (172)
T 4e8u_A 34 SGSKLRDEYILRGFNPTRVRPLWNYLGHSGTAIVEFN 70 (172)
T ss_dssp CSHHHHHHHHHTTCCCSEEEEEECSSBEEEEEEEECC
T ss_pred CHHHHHHHHHhcCCCCceeEecccCCCCceeEEEEec
Confidence 567888888889999999998842 35676653
No 328
>2wr8_A Putative uncharacterized protein PH0463; transferase, SAM, SAM hydroxide adenosyltransferase (DUF-62) water activation; HET: SAH; 1.77A {Pyrococcus horikoshii} PDB: 1wu8_A*
Probab=29.88 E-value=1.1e+02 Score=20.46 Aligned_cols=47 Identities=9% Similarity=0.064 Sum_probs=34.2
Q ss_pred CcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE-EEeeecCCC
Q 038113 6 AKGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVI-IVETILPKL 52 (112)
Q Consensus 6 P~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~-i~e~~~~~~ 52 (112)
|++.++=++|-+--++-.++.-+|.++++..++|...+ ++|+-...+
T Consensus 30 p~~~IvDitH~I~p~~i~~aa~~L~~~~~yfP~gTVhv~VVDPGVGt~ 77 (259)
T 2wr8_A 30 PNAKIVDVTHSVTRHSILEGSFVMEQVVKYSPKGTVHVGVIDPGVGTE 77 (259)
T ss_dssp TTCEEEEEESCSCTTCHHHHHHHHHHHHHHSCTTCEEEEECCTTCC-C
T ss_pred cCCeEEEecCCCCCcCHHHHHHHHHHhhccCCCCCEEEEEECCCCCCC
Confidence 45566666666666777889999999999999998766 567644433
No 329
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=29.79 E-value=81 Score=21.27 Aligned_cols=32 Identities=16% Similarity=0.112 Sum_probs=23.3
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVI 43 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 43 (112)
++|+|+++ .+.....++++++.+.++||..++
T Consensus 94 ~aDvVila-----vp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 94 SPDFVMLS-----SPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CCSEEEEC-----SCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred cCCEEEEe-----CCHHHHHHHHHHHhhccCCCcEEE
Confidence 35888765 355556788999999999987543
No 330
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=29.73 E-value=57 Score=16.13 Aligned_cols=20 Identities=5% Similarity=-0.167 Sum_probs=15.9
Q ss_pred cCHHHHHHHHHhcCCCeeEE
Q 038113 79 RTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~ 98 (112)
.+.+++.+.++++||+...+
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 51 LPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp SCHHHHHHHHHTTSSCEEEE
T ss_pred CCHHHHHHHHHHhCCCceee
Confidence 36788999999999986543
No 331
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=29.50 E-value=89 Score=21.45 Aligned_cols=37 Identities=8% Similarity=0.032 Sum_probs=24.6
Q ss_pred ccEEEeccccccCC----hH-HHHHHHHHHHhhCCCC-CEEEEE
Q 038113 8 GDAIYMKWILHDWS----DE-HCLKLFKKCYKSIPKD-GMVIIV 45 (112)
Q Consensus 8 ~D~v~~~~vlh~~~----d~-~~~~iL~~~~~aL~pg-g~l~i~ 45 (112)
.|+|+.--.-+ -. |+ ....+|.-+.+.|+|| |.+++-
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 38887644433 11 21 1356788889999999 998875
No 332
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=29.47 E-value=54 Score=18.32 Aligned_cols=25 Identities=4% Similarity=-0.011 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCceE
Q 038113 82 HELMTLVTGAGFGGIRFESFICNLW 106 (112)
Q Consensus 82 ~e~~~ll~~aGf~~~~~~~~~~~~~ 106 (112)
.++.+|+++.|++.......++.+.
T Consensus 68 ~dIp~~~~~~G~~v~~~e~~~~~~~ 92 (97)
T 1je3_A 68 NNIPLDARNHGYTVLDIQQDGPTIR 92 (97)
T ss_dssp CHHHHHHHHHTCSEEEEEECSSSEE
T ss_pred HHHHHHHHHCCCEEEEEEeeCCEEE
Confidence 4667889999999887655544443
No 333
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=28.72 E-value=19 Score=25.47 Aligned_cols=21 Identities=14% Similarity=0.265 Sum_probs=15.8
Q ss_pred HHHHHHH----HhhCCCCCEEEEEe
Q 038113 26 LKLFKKC----YKSIPKDGMVIIVE 46 (112)
Q Consensus 26 ~~iL~~~----~~aL~pgg~l~i~e 46 (112)
.+.++.+ +++|+|||.+++.-
T Consensus 290 ~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 290 WEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 3455555 99999999998763
No 334
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=28.71 E-value=1.3e+02 Score=20.01 Aligned_cols=44 Identities=14% Similarity=-0.030 Sum_probs=30.6
Q ss_pred cEEEeccccccCChH-----HHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 038113 9 DAIYMKWILHDWSDE-----HCLKLFKKCYKSIPKDGMVIIVETILPKL 52 (112)
Q Consensus 9 D~v~~~~vlh~~~d~-----~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 52 (112)
|.|++...-+.=... ...+++..+++..+||.++++.++.....
T Consensus 95 D~VilQe~S~~~~~~~~~~~~~~~l~~~ir~~~~p~ak~il~~TWa~~~ 143 (271)
T 4i8i_A 95 DYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYAT 143 (271)
T ss_dssp SEEEECCCGGGTTCHHHHHHHHHHHHHHHHTTSCTTCEEEEEECCCCCT
T ss_pred CEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCEEEEEeccCCCC
Confidence 999988865443322 24666676666666999999999876554
No 335
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=28.60 E-value=34 Score=22.87 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=13.1
Q ss_pred CCCCEEEEEeeecCCC
Q 038113 37 PKDGMVIIVETILPKL 52 (112)
Q Consensus 37 ~pgg~l~i~e~~~~~~ 52 (112)
.|||.-+|+|...+..
T Consensus 94 GPgGvaiiVe~lTDN~ 109 (249)
T 1kon_A 94 GPGGTAIMIECLSDNR 109 (249)
T ss_dssp ETTTEEEEEEEEESCH
T ss_pred CCCceEEEEEEecCCH
Confidence 3899999999888753
No 336
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=28.54 E-value=17 Score=26.80 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=18.6
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 038113 26 LKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e 46 (112)
...++++.+.|+|||++.++-
T Consensus 292 ~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 292 LCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEe
Confidence 478999999999999999874
No 337
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=28.47 E-value=60 Score=17.62 Aligned_cols=23 Identities=17% Similarity=0.286 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCC
Q 038113 81 KHELMTLVTGAGFGGIRFESFIC 103 (112)
Q Consensus 81 ~~e~~~ll~~aGf~~~~~~~~~~ 103 (112)
..++.+|+++.|+++......++
T Consensus 42 ~~dI~~~~~~~G~~v~~~~~~~g 64 (87)
T 3hz7_A 42 RQNLQKMAEGMGYQSEYLEKDNG 64 (87)
T ss_dssp HHHHHHHHHHHTCEEEEEECGGG
T ss_pred HHHHHHHHHHCCCEEEEEEecCC
Confidence 45778889999998876543333
No 338
>3bzq_A Nitrogen regulatory protein P-II; GLNB, GLNK, signal transdu protein, nucleotide-binding, transcription; 1.40A {Mycobacterium tuberculosis H37RV} PDB: 3lf0_A*
Probab=28.10 E-value=40 Score=19.16 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=18.8
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK----DGMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p----gg~l~i~e~ 47 (112)
+|++..++++.+.+++.. +|++++.+-
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 3bzq_A 68 DDSIVDKVVDSIVRAARTGKIGDGKVWVSPV 98 (114)
T ss_dssp ETTTHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 456677777777777665 378888763
No 339
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=27.46 E-value=49 Score=19.70 Aligned_cols=27 Identities=4% Similarity=0.218 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
+|+++.++++.+.++++. | |++++.+-
T Consensus 79 ~de~ve~Vv~~I~~~~~tg~~GdGkIFV~pV 109 (135)
T 2o66_A 79 KKDQVESVINTIIEGARTGEIGDGKIFVLPV 109 (135)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 567788888888887774 3 88888864
No 340
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=27.24 E-value=1.1e+02 Score=19.82 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=23.0
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEE
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVII 44 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 44 (112)
++|+|++. .+......+++++.+.++++..++.
T Consensus 62 ~aDvVila-----vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 62 SPDFVMLS-----SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CCSEEEEC-----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEc-----CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 34777664 4555667888888888998875443
No 341
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=27.13 E-value=63 Score=18.72 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=25.6
Q ss_pred EEEec-cccc--cCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 10 AIYMK-WILH--DWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 10 ~v~~~-~vlh--~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
.|-+. ++-. -++++....+++.....+..+|.|+|.
T Consensus 43 aV~Lrf~i~t~~~Lp~~~k~rl~~~~~~ri~~~G~ivv~ 81 (112)
T 1j26_A 43 KAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLT 81 (112)
T ss_dssp EEEEEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEEE
T ss_pred eEEEEEeccccccCCHHHHHHHHHhhccccccCCeEEEE
Confidence 45444 4332 467888889999988889988876663
No 342
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=26.99 E-value=78 Score=16.81 Aligned_cols=53 Identities=9% Similarity=0.039 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcCCCeeEEEEeCCc
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVETILPKLPETRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAGFGGIRFESFICN 104 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~ 104 (112)
..-.+++..+.|++|..|.|. .++.. +..++.+|+++.|++........+.
T Consensus 23 Pvl~~kkal~~l~~G~~l~V~---~dd~~--------------------------a~~di~~~~~~~G~~~~~~~~~~~~ 73 (82)
T 3lvj_C 23 PVMMVRKTVRNMQPGETLLII---ADDPA--------------------------TTRDIPGFCTFMEHELVAKETDGLP 73 (82)
T ss_dssp HHHHHHHHHHTSCTTCEEEEE---ECCTT--------------------------HHHHHHHHHHHTTCEEEEEECSSSS
T ss_pred HHHHHHHHHHhCCCCCEEEEE---ECCcc--------------------------HHHHHHHHHHHCCCEEEEEEecCCE
Confidence 344556666677888776553 23221 2457788999999998776544343
Q ss_pred eE
Q 038113 105 LW 106 (112)
Q Consensus 105 ~~ 106 (112)
+.
T Consensus 74 ~~ 75 (82)
T 3lvj_C 74 YR 75 (82)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 343
>3hjh_A Transcription-repair-coupling factor; MFD, mutation frequency decline, ATP-binding, DNA DAMA repair, DNA-binding, helicase, hydrolase; 1.95A {Escherichia coli} PDB: 2b2n_A* 4dfc_A
Probab=26.81 E-value=26 Score=25.60 Aligned_cols=31 Identities=16% Similarity=0.181 Sum_probs=25.0
Q ss_pred CceecCHHHHHHHHHhcCCCeeEEEEeCCce
Q 038113 75 GGKERTKHELMTLVTGAGFGGIRFESFICNL 105 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~ 105 (112)
-|...+.+++.+.|.+.||+.+..+..+|-+
T Consensus 132 ~G~~~~~~~l~~~L~~~GY~r~~~V~~~Gef 162 (483)
T 3hjh_A 132 KGQRLSRDALRTQLDSAGYRHVDQVMEHGEY 162 (483)
T ss_dssp TTCCCCHHHHHHHHHHTTCEECSSCCSTTEE
T ss_pred CCCCcCHHHHHHHHHHcCCeeccccCCceEE
Confidence 5777899999999999999988776555433
No 344
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=26.72 E-value=43 Score=19.27 Aligned_cols=27 Identities=7% Similarity=0.234 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 038113 21 SDEHCLKLFKKCYKSIPK---D-GMVIIVET 47 (112)
Q Consensus 21 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 47 (112)
+|+++.++++.+.+++.. | |++++.+-
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (119)
T 2j9c_A 68 KEEDVDNVIDIICENARTGNPGDGKIFVIPV 98 (119)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 566677888888877664 4 78888764
No 345
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=26.71 E-value=64 Score=15.78 Aligned_cols=19 Identities=11% Similarity=0.069 Sum_probs=15.8
Q ss_pred cCHHHHHHHHHhcCCCeeE
Q 038113 79 RTKHELMTLVTGAGFGGIR 97 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~ 97 (112)
.+.+++.+.++++||...-
T Consensus 46 ~~~~~i~~~i~~~Gy~~~~ 64 (68)
T 3iwl_A 46 HSMDTLLATLKKTGKTVSY 64 (68)
T ss_dssp SCHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHHcCCceEe
Confidence 3688999999999998753
No 346
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=26.48 E-value=34 Score=22.73 Aligned_cols=16 Identities=19% Similarity=0.162 Sum_probs=10.9
Q ss_pred eecCHHHHHHHHHhcC
Q 038113 77 KERTKHELMTLVTGAG 92 (112)
Q Consensus 77 ~~rt~~e~~~ll~~aG 92 (112)
+.||..+++.+|.+.|
T Consensus 102 ~nRt~~~vR~~f~K~g 117 (240)
T 1mw7_A 102 PTRTIANLKSYFNKTQ 117 (240)
T ss_dssp HHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHHhhcC
Confidence 4466777777777766
No 347
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=26.46 E-value=1.5e+02 Score=19.84 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=24.3
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILP 50 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 50 (112)
.|++++..--..|++++...+.+ .++.||-++.+.....
T Consensus 59 ~D~vV~~~~~~~l~~~~~~~l~~----yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 59 YQLVVLDYNGDSWPEETNRRFLE----YVQNGGGVVIYHAADN 97 (281)
T ss_dssp CSEEEECCCSSCCCHHHHHHHHH----HHHTTCEEEEEGGGGG
T ss_pred CCEEEEeCCCCcCCHHHHHHHHH----HHHcCCCEEEEecccc
Confidence 49999766545566654433333 3445888888876444
No 348
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.33 E-value=76 Score=16.51 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
-|.++++++|++.| .+..+. +...++.|++
T Consensus 21 ~t~~~l~~~F~~~G-~v~~~~-~~~~~afV~f 50 (90)
T 2dnp_A 21 CTSQELRSLFERRG-RVIECD-VVKDYAFVHM 50 (90)
T ss_dssp CCHHHHHHHHHHHS-CEEEEE-ECSSCEEEEE
T ss_pred CCHHHHHHHHHcCC-CEEEEE-EECCEEEEEE
Confidence 48999999999988 444443 3344666664
No 349
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=26.25 E-value=50 Score=24.46 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=17.5
Q ss_pred HHHHHHHhhCC-CCCEEEEEe
Q 038113 27 KLFKKCYKSIP-KDGMVIIVE 46 (112)
Q Consensus 27 ~iL~~~~~aL~-pgg~l~i~e 46 (112)
..++++.+.|+ |||++.++-
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEE
T ss_pred HHHHHHHHHhCCCceeEEEEe
Confidence 58999999999 999998864
No 350
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=25.91 E-value=46 Score=18.04 Aligned_cols=16 Identities=25% Similarity=0.343 Sum_probs=12.4
Q ss_pred CHHHHHHHHHhcCCCe
Q 038113 80 TKHELMTLVTGAGFGG 95 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~ 95 (112)
...|--+||++|||..
T Consensus 20 eA~eAC~WLRaaGFPQ 35 (81)
T 2h80_A 20 EAKEACDWLRAAGFPQ 35 (81)
T ss_dssp HHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCCcH
Confidence 4557788999999963
No 351
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=25.72 E-value=28 Score=19.55 Aligned_cols=19 Identities=0% Similarity=-0.064 Sum_probs=16.3
Q ss_pred eecCHHHHHHHHHhcCCCe
Q 038113 77 KERTKHELMTLVTGAGFGG 95 (112)
Q Consensus 77 ~~rt~~e~~~ll~~aGf~~ 95 (112)
...|.+++..||++.||..
T Consensus 18 ~~Ws~edV~~WL~~~Gl~~ 36 (97)
T 2d8c_A 18 VYWSPKKVADWLLENAMPE 36 (97)
T ss_dssp SSCCTTHHHHHHHHTTCTT
T ss_pred hhCCHHHHHHHHHHcCCHH
Confidence 4568999999999999875
No 352
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=25.67 E-value=49 Score=14.05 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHhhCCC
Q 038113 22 DEHCLKLFKKCYKSIPK 38 (112)
Q Consensus 22 d~~~~~iL~~~~~aL~p 38 (112)
|.+..++-.+++++|.=
T Consensus 12 dqeikelennirkalsf 28 (31)
T 2wh0_Q 12 DQEIKELENNIRKALSF 28 (31)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 56677888888888753
No 353
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.53 E-value=91 Score=17.14 Aligned_cols=31 Identities=19% Similarity=0.091 Sum_probs=21.7
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeC-CceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFI-CNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~ 110 (112)
-|+++++++|++-| .+.++.-.. .+++.|++
T Consensus 27 ~te~~L~~~F~~fG-~v~~v~i~~~kg~aFVef 58 (101)
T 2cq1_A 27 VTETEVIALGLPFG-KVTNILMLKGKNQAFLEL 58 (101)
T ss_dssp CCHHHHHHTTTTTS-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHhcC-CEEEEEEECCCCEEEEEE
Confidence 48899999998888 665554332 36777775
No 354
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=25.46 E-value=92 Score=18.07 Aligned_cols=24 Identities=4% Similarity=-0.058 Sum_probs=19.9
Q ss_pred CHHHHHHHHHhcCCCeeEEEEeCC
Q 038113 80 TKHELMTLVTGAGFGGIRFESFIC 103 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~~~~ 103 (112)
..++.++-|.++||...++...+|
T Consensus 17 kld~V~~AL~~~G~~~t~v~~~gG 40 (114)
T 3m05_A 17 DANYLSDQFIDQNVRATKLSTTGG 40 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHHHHHHHHHHCCCCEEEEEEecc
Confidence 567999999999999877776654
No 355
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=25.25 E-value=1.1e+02 Score=20.32 Aligned_cols=34 Identities=6% Similarity=0.066 Sum_probs=21.5
Q ss_pred cEEEeccccc-cCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 9 DAIYMKWILH-DWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh-~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
|+|++.++-. .+++++ .+.|++..+ .||.|+++-
T Consensus 52 DvIIl~d~~~~~l~~~~-~~~L~~yV~---~GGgLi~~g 86 (259)
T 3rht_A 52 DLVILSDYPAERMTAQA-IDQLVTMVK---AGCGLVMLG 86 (259)
T ss_dssp SEEEEESCCGGGBCHHH-HHHHHHHHH---TTCEEEEEC
T ss_pred CEEEEcCCccccCCHHH-HHHHHHHHH---hCCeEEEec
Confidence 9999987654 355543 444444444 488888774
No 356
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=25.10 E-value=31 Score=21.64 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=18.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhh
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKS 35 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~a 35 (112)
|++++..++-+|.-++-.+|.+.=|++
T Consensus 110 dl~Iiv~Vfi~p~a~D~~kiy~~NY~A 136 (169)
T 1y60_A 110 DLYVLVGVFIHWEAADDAKIQKYNYEA 136 (169)
T ss_dssp GEEEEEEECCCTTCCCHHHHHHHHHHH
T ss_pred cEEEEEEeecCccccCHHHHHHHHHHH
Confidence 888888877778755556777665554
No 357
>3n1g_B Desert hedgehog protein; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence, fibronectins; 1.90A {Homo sapiens} SCOP: d.65.1.2 PDB: 3n1q_B
Probab=25.06 E-value=1.3e+02 Score=18.80 Aligned_cols=85 Identities=15% Similarity=0.089 Sum_probs=46.3
Q ss_pred cEEEe----ccccccCChHHHHHHHHHHHhhCC---CCCEEEEEeeecCCCCCCch-hhhhhhhhchhhhhcCCCceec-
Q 038113 9 DAIYM----KWILHDWSDEHCLKLFKKCYKSIP---KDGMVIIVETILPKLPETRT-LSKIISQGDVLMMTQNPGGKER- 79 (112)
Q Consensus 9 D~v~~----~~vlh~~~d~~~~~iL~~~~~aL~---pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~r- 79 (112)
|+++- .+-.+.++ ..+...|..+...+. +|..|.|.+..-.+...... .--...+.|+.+. ++..
T Consensus 65 divFrDee~tg~~~~Md-~rl~d~L~~L~~~v~~~~~g~pi~V~SGYRsp~~Na~~SlH~~GrAaDI~~~-----~~~~~ 138 (170)
T 3n1g_B 65 DIIFKDEENSGADRLMT-ERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTS-----DRDRN 138 (170)
T ss_dssp TEEECCTTSSSGGGEEC-HHHHHHHHHHHHHHHHHSTTCCEEEEESSCCSCCSCTTCGGGGTCEEEEEET-----TCCGG
T ss_pred CcEEecccccCCcccCC-HHHHHHHHHHHHHHhcccCCCcEEEEecccCccccCCcCchheeEEEEEEeC-----CccHH
Confidence 66655 22344443 446777777776654 57788888876554332211 1111234454432 2111
Q ss_pred CHHHHHHHHHhcCCCeeEEEE
Q 038113 80 TKHELMTLVTGAGFGGIRFES 100 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~~~~~ 100 (112)
....+.++..++||.-+ ..+
T Consensus 139 k~~~La~~A~~~gfd~V-~Y~ 158 (170)
T 3n1g_B 139 KYGLLARLAVEAGFDWV-YYE 158 (170)
T ss_dssp GHHHHHHHHHHTTCSEE-ECC
T ss_pred HHHHHHHHHHHCCCCEE-EeC
Confidence 22366788889999988 544
No 358
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=25.05 E-value=48 Score=22.70 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=17.2
Q ss_pred HHHHHHHhhCCCCCEEEEEe
Q 038113 27 KLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e 46 (112)
..++.+.++|++||+++++.
T Consensus 251 ~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 251 KHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp HHHHHHHHHSCTTCEEEECS
T ss_pred hhHHHHHHHhcCCCEEEEEC
Confidence 47788899999999999873
No 359
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=24.97 E-value=70 Score=24.94 Aligned_cols=37 Identities=11% Similarity=-0.006 Sum_probs=25.0
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE
Q 038113 7 KGDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVI 43 (112)
Q Consensus 7 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 43 (112)
.+|+++.-+.=.....|-..+.|..+.+-|+|||.++
T Consensus 495 kVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 495 QPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3599976665332233335678888889999999753
No 360
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=24.48 E-value=39 Score=21.71 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=15.6
Q ss_pred CceecCHHHHHHHHHhcCCCee
Q 038113 75 GGKERTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~ 96 (112)
+|...+.++..++++ +|...+
T Consensus 201 ~GGI~~~~d~~~~~~-~Gadgv 221 (253)
T 1thf_D 201 SGGAGKMEHFLEAFL-AGADAA 221 (253)
T ss_dssp ESCCCSHHHHHHHHH-TTCSEE
T ss_pred ECCCCCHHHHHHHHH-cCChHH
Confidence 567778889998884 786554
No 361
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=24.34 E-value=76 Score=17.72 Aligned_cols=25 Identities=24% Similarity=0.264 Sum_probs=20.3
Q ss_pred ccEEEecc--ccccCChHHHHHHHHHH
Q 038113 8 GDAIYMKW--ILHDWSDEHCLKLFKKC 32 (112)
Q Consensus 8 ~D~v~~~~--vlh~~~d~~~~~iL~~~ 32 (112)
||.++--| .+..|+..++.++|+++
T Consensus 50 GD~I~~VNG~~v~g~~h~evv~lLk~~ 76 (95)
T 3gge_A 50 GDHIESINGENIVGWRHYDVAKKLKEL 76 (95)
T ss_dssp TCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCEEEEECCEEccCCCHHHHHHHHHhC
Confidence 58777766 67789999999999884
No 362
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.06 E-value=1e+02 Score=17.29 Aligned_cols=31 Identities=19% Similarity=0.093 Sum_probs=22.7
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeC-CceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFI-CNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~ 110 (112)
-|+++++++|++-| ++.++.-+. .+++.|++
T Consensus 28 vte~dL~~lF~~fG-~V~~v~i~~~kGfaFVeF 59 (105)
T 1sjq_A 28 VTEGEVISLGLPFG-KVTNLLMLKGKNQAFIEM 59 (105)
T ss_dssp SCHHHHHHHHHHHC-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHhcC-CEEEEEEEcCCCEEEEEE
Confidence 48999999999999 666655332 46777775
No 363
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=24.06 E-value=1.1e+02 Score=21.61 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=26.8
Q ss_pred ccEEEecccccc--C-C-hHHHHHHHHHHHhhCCCCCEEEEEeee
Q 038113 8 GDAIYMKWILHD--W-S-DEHCLKLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 8 ~D~v~~~~vlh~--~-~-d~~~~~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
+|+.++-...-+ + + .+...++.+.+.++++.||+++|--..
T Consensus 180 ~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 180 ADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp CSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred ccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 488886554322 2 2 233566777777888889999886654
No 364
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=24.02 E-value=46 Score=15.48 Aligned_cols=16 Identities=6% Similarity=0.322 Sum_probs=13.0
Q ss_pred CHHHHHHHHHhcCCCe
Q 038113 80 TKHELMTLVTGAGFGG 95 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~ 95 (112)
+.+++.+.++.+||..
T Consensus 52 ~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 52 SVKDIADAIEDQGYDV 67 (69)
T ss_dssp CHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHcCCCc
Confidence 5678888899999864
No 365
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=23.91 E-value=18 Score=22.21 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=17.5
Q ss_pred HHHHHHHhhCCCCCEEEEEeee
Q 038113 27 KLFKKCYKSIPKDGMVIIVETI 48 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e~~ 48 (112)
..++.+.+.|+|||+++++-..
T Consensus 118 ~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 118 EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp HHHHHHHHTEEEEEEEEECSCG
T ss_pred HHHHHHHHHhccCCEEEEEcCC
Confidence 3577888999999999987543
No 366
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=23.71 E-value=69 Score=25.48 Aligned_cols=22 Identities=0% Similarity=0.043 Sum_probs=18.0
Q ss_pred HHHHHHHHhhCCCCCEEEEEee
Q 038113 26 LKLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 26 ~~iL~~~~~aL~pgg~l~i~e~ 47 (112)
..+++++.+.|+|||++.++=+
T Consensus 445 ~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 445 ALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEC
Confidence 3478889999999999988643
No 367
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=23.57 E-value=72 Score=20.27 Aligned_cols=28 Identities=32% Similarity=0.438 Sum_probs=21.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKD 39 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pg 39 (112)
-++++.++| ++++|..|++.+...+++.
T Consensus 21 ~i~~~~~fL---s~~Ec~~li~~~~~~~~~s 48 (224)
T 2jig_A 21 RAFLLKNFL---SDEECDYIVEKARPKMVKS 48 (224)
T ss_dssp TEEEETTCS---CHHHHHHHHHHHGGGCEEC
T ss_pred CEEEEcccC---CHHHHHHHHHHhhccCeee
Confidence 356666665 8899999999988766654
No 368
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=23.45 E-value=33 Score=26.11 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=25.2
Q ss_pred CCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEE
Q 038113 5 VAK-GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMV 42 (112)
Q Consensus 5 ~P~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l 42 (112)
+|+ +|+++.-++=...-.|-.-++|....+-|+|||.+
T Consensus 425 LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 425 APEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred CCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 565 59987665433333333456777778899999875
No 369
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=23.38 E-value=24 Score=26.10 Aligned_cols=20 Identities=5% Similarity=0.104 Sum_probs=17.6
Q ss_pred HHHHHHHhhCCCCCEEEEEe
Q 038113 27 KLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e 46 (112)
..++++.+.|+|||++.++-
T Consensus 376 ~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 376 AWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCceEEEEe
Confidence 58999999999999998863
No 370
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=23.32 E-value=1.4e+02 Score=18.45 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=38.3
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc-h--h--------hhhhhhh---chhhhhcCCCceecCHHHHHHHHHh
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVETILPKLPETR-T--L--------SKIISQG---DVLMMTQNPGGKERTKHELMTLVTG 90 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~-~--~--------~~~~~~~---~~~~~~~~~~g~~rt~~e~~~ll~~ 90 (112)
....+.+..+.|++-..+=++|.-....+... . . .+..... +.... ...+|+..|.+++.+++++
T Consensus 20 ~~~~i~eY~kRl~~~~~~ei~ei~~~k~~~~~s~~~~~~~~~~Eg~~il~~i~~~~~vI~-LD~~Gk~~sS~~fA~~l~~ 98 (163)
T 4fak_A 20 WKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVIT-LEIQGKMLSSEGLAQELNQ 98 (163)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTCCTTSEEEE-EEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCcCCeEEEEecccccccccchhhHHHHHHHHHHHHHHhCCCCCEEEE-EcCCCCcCCHHHHHHHHHH
Confidence 45677888888888888888887544332210 0 0 0000000 11111 2347899999999999987
No 371
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=23.03 E-value=1.1e+02 Score=21.61 Aligned_cols=81 Identities=6% Similarity=-0.008 Sum_probs=43.9
Q ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEEE----eeecCCCCC-CchhhhhhhhhchhhhhcCCCceecCHHHHHHHHHhcC
Q 038113 18 HDWSDEHCLKLFKKCYKSIPKDGMVIIV----ETILPKLPE-TRTLSKIISQGDVLMMTQNPGGKERTKHELMTLVTGAG 92 (112)
Q Consensus 18 h~~~d~~~~~iL~~~~~aL~pgg~l~i~----e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aG 92 (112)
..+++++..++++.+...--|.++.++. ++.++.... ..+.......+...+.. .-++.-....+.+.++.||
T Consensus 104 ~~i~~~di~~~i~~a~~~~~p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~--v~~~~~~v~n~~~~~~~AG 181 (419)
T 4a2a_A 104 RSITLDILSEMQSEALEKLKENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTS--IVVPLKVYEMFYNFLQDTV 181 (419)
T ss_dssp EECCHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEE--EEEEHHHHHHHHHHHHTTS
T ss_pred CEECHHHHHHHHHHhhhhcCCCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEE--EEEeHHHHHHHHHHHHHcC
Confidence 4678889888988877644566666552 445544321 11111000001111111 1223335678899999999
Q ss_pred CCeeEEEE
Q 038113 93 FGGIRFES 100 (112)
Q Consensus 93 f~~~~~~~ 100 (112)
+++..+..
T Consensus 182 L~v~~lv~ 189 (419)
T 4a2a_A 182 KSPFQLKS 189 (419)
T ss_dssp CSCEEEEE
T ss_pred CcEEEEEE
Confidence 99887653
No 372
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=22.97 E-value=55 Score=15.57 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=14.4
Q ss_pred cCHHHHHHHHHhcCCCee
Q 038113 79 RTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~ 96 (112)
.+.+++.+.++++||...
T Consensus 46 ~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 46 ADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHcCCCcE
Confidence 367889999999999753
No 373
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=22.97 E-value=71 Score=19.77 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=21.3
Q ss_pred CCCcccEEEec------ccccc----CChHHHHHHHHHHHh-hCC
Q 038113 4 NVAKGDAIYMK------WILHD----WSDEHCLKLFKKCYK-SIP 37 (112)
Q Consensus 4 ~~P~~D~v~~~------~vlh~----~~d~~~~~iL~~~~~-aL~ 37 (112)
+.|.|++++.. +|+|- |..++..++|++|++ +|+
T Consensus 70 ~~~~G~a~iT~g~l~~~~VIHtVgP~~~~~~~~~~L~~~y~~~L~ 114 (168)
T 3eti_A 70 AIAPGNAVLFENVLEHLSVMNAVGPRNGDSRVEGKLCNVYKAIAK 114 (168)
T ss_dssp CCCTTEEEEEEEEETTEEEEEEECCCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEecCCCCccEEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 34555555543 68885 665556788888885 444
No 374
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=22.89 E-value=1e+02 Score=16.88 Aligned_cols=30 Identities=17% Similarity=0.144 Sum_probs=20.4
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
-|.++++++|.+.| .+..+.-. .+++.|++
T Consensus 43 ~t~~~L~~~F~~~G-~i~~v~i~-kg~afV~f 72 (108)
T 2jvo_A 43 VQESELNEIFGPFG-PMKEVKIL-NGFAFVEF 72 (108)
T ss_dssp CCHHHHHHHHTTTS-CCCEEEEE-TTEEEEEC
T ss_pred CCHHHHHHHHHhcC-CEEEEEEE-CCEEEEEE
Confidence 48999999998887 44444333 55666654
No 375
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=22.63 E-value=61 Score=20.74 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhCCCCCEEEEEe
Q 038113 25 CLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 25 ~~~iL~~~~~aL~pgg~l~i~e 46 (112)
..-++.|+.+++++||.+-|.-
T Consensus 151 l~NLl~NA~~a~~~gg~I~v~~ 172 (247)
T 4fpp_A 151 VLNIAQIAASALPAGGVATVKG 172 (247)
T ss_dssp HHHHHHHHHTTCTTCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEEE
Confidence 4457788888999999876653
No 376
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=22.55 E-value=67 Score=15.03 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=13.8
Q ss_pred CHHHHHHHHHhcCCCee
Q 038113 80 TKHELMTLVTGAGFGGI 96 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~~ 96 (112)
+.+++.+.++++||+..
T Consensus 50 ~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 50 QATEICQAINELGYQAE 66 (68)
T ss_dssp CHHHHHHHHHTTSSCEE
T ss_pred CHHHHHHHHHHcCCCcc
Confidence 56788999999999753
No 377
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.55 E-value=1e+02 Score=17.68 Aligned_cols=31 Identities=19% Similarity=0.067 Sum_probs=20.9
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe-CCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF-ICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~ 110 (112)
-|+++++++|++-| ++.++.-+ .-+++.||+
T Consensus 43 vte~dL~~lF~~fG-~V~~v~i~~~kG~AFVeF 74 (119)
T 2ad9_A 43 VTEGEVISLGLPFG-KVTNLLMLKGKNQAFIEM 74 (119)
T ss_dssp CCHHHHHHHHTTTS-CCCEEEEEGGGTEEEEEC
T ss_pred CCHHHHHHHHHhcC-CEEEEEEeCCCCEEEEEE
Confidence 48899999999888 55554433 235666664
No 378
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=22.54 E-value=59 Score=16.98 Aligned_cols=16 Identities=13% Similarity=0.248 Sum_probs=12.2
Q ss_pred cCHHHHHHHHHhcCCC
Q 038113 79 RTKHELMTLVTGAGFG 94 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~ 94 (112)
.|.++..+||+..||.
T Consensus 5 Ws~~~V~~WL~~lgl~ 20 (76)
T 2f3n_A 5 WSKFDVGDWLESIHLG 20 (76)
T ss_dssp CCHHHHHHHHHHTTCG
T ss_pred CCHHHHHHHHHHCCCH
Confidence 4677888888888875
No 379
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.49 E-value=94 Score=16.21 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=20.5
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
-|.++++++|++.| .+..+. +...++.|++
T Consensus 22 ~t~~~l~~~F~~~G-~v~~v~-~~~~~afV~f 51 (92)
T 2dgt_A 22 CTNQELRAKFEEYG-PVIECD-IVKDYAFVHM 51 (92)
T ss_dssp CCHHHHHHHHHTTS-CCCEEE-ECSSEEEEEE
T ss_pred CCHHHHHHHHHhcC-CeEEEE-EECCEEEEEE
Confidence 48999999999888 554443 3344666664
No 380
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=22.35 E-value=59 Score=13.79 Aligned_cols=18 Identities=11% Similarity=0.495 Sum_probs=12.5
Q ss_pred ccCChHHHHHHHHHHHhh
Q 038113 18 HDWSDEHCLKLFKKCYKS 35 (112)
Q Consensus 18 h~~~d~~~~~iL~~~~~a 35 (112)
..+++.+..++|.+|.+.
T Consensus 7 trfdekqieelldnciet 24 (31)
T 4h62_V 7 TRFDEKQIEELLDNCIET 24 (31)
T ss_dssp ---CHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHH
Confidence 356778889999998764
No 381
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=22.25 E-value=31 Score=17.50 Aligned_cols=21 Identities=29% Similarity=0.311 Sum_probs=17.2
Q ss_pred cCChHHHHHHHHHHHhhCCCC
Q 038113 19 DWSDEHCLKLFKKCYKSIPKD 39 (112)
Q Consensus 19 ~~~d~~~~~iL~~~~~aL~pg 39 (112)
.++++++..||+.+-+++..|
T Consensus 4 ~lt~eq~~aILkaLdeaIe~G 24 (57)
T 3fxd_A 4 QLSDEQKETILKALNDAIEKG 24 (57)
T ss_dssp CCCHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHHHcC
Confidence 468889999999988887666
No 382
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=22.24 E-value=41 Score=22.90 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=17.9
Q ss_pred ecCHHHHHHHHHhcCCCeeEE
Q 038113 78 ERTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 78 ~rt~~e~~~ll~~aGf~~~~~ 98 (112)
.++.+++.++++++||+.++.
T Consensus 321 ~~~~~~~~~~i~~~G~~~~~r 341 (350)
T 3t7v_A 321 DRDIKSVVRRLEIMGMKPARQ 341 (350)
T ss_dssp CCCHHHHHHHHHHHTCEECCH
T ss_pred cCCHHHHHHHHHHcCCccccH
Confidence 368999999999999987653
No 383
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=22.15 E-value=1e+02 Score=17.01 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=19.0
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCC-CCEEEEEe
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPK-DGMVIIVE 46 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p-gg~l~i~e 46 (112)
|+++ .++.+...+++.+++. + +..++++-
T Consensus 64 dlvi-------~~~~~g~~~~~~l~~~--~~~~~ii~ls 93 (137)
T 2pln_A 64 DLVM-------VSDKNALSFVSRIKEK--HSSIVVLVSS 93 (137)
T ss_dssp SEEE-------ECSTTHHHHHHHHHHH--STTSEEEEEE
T ss_pred CEEE-------EcCccHHHHHHHHHhc--CCCccEEEEe
Confidence 6776 3444456788888877 5 66666653
No 384
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=22.01 E-value=60 Score=22.05 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=17.1
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 038113 27 KLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e~ 47 (112)
..++.+.++|+|||+++++-.
T Consensus 254 ~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 254 ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 357788899999999998754
No 385
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=21.89 E-value=1.1e+02 Score=16.96 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=22.1
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEe-CCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESF-ICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~ 110 (112)
-|++++++++++-| ++.++.-+ ..+++.||+
T Consensus 33 ~te~~L~~lF~~fG-~V~~v~i~~~kg~AFVef 64 (100)
T 3r27_A 33 VVEADLVEALQEFG-PISYVVVMPKKRQALVEF 64 (100)
T ss_dssp CCHHHHHHHHGGGS-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHhccC-CEEEEEEEcCCCEEEEEE
Confidence 48899999999888 66555433 246777775
No 386
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=21.87 E-value=63 Score=15.60 Aligned_cols=18 Identities=28% Similarity=0.289 Sum_probs=14.7
Q ss_pred cCHHHHHHHHHhcCCCee
Q 038113 79 RTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~ 96 (112)
.+.+++.+.++++||+..
T Consensus 50 ~~~~~i~~~i~~~Gy~~~ 67 (69)
T 4a4j_A 50 TTPQILTDAVERAGYHAR 67 (69)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCceE
Confidence 367899999999999753
No 387
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=21.87 E-value=74 Score=20.47 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=15.7
Q ss_pred CChHHHHHHHHHHHhhCCCCC
Q 038113 20 WSDEHCLKLFKKCYKSIPKDG 40 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~pgg 40 (112)
++++||..|++.+...|++.+
T Consensus 48 Ls~~Ec~~Li~~a~~~l~~s~ 68 (216)
T 3itq_A 48 LSDEECDELIELSKSKLARSK 68 (216)
T ss_dssp SCHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhhcccccce
Confidence 589999999999888777643
No 388
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=21.64 E-value=62 Score=21.99 Aligned_cols=21 Identities=10% Similarity=0.159 Sum_probs=17.4
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 038113 27 KLFKKCYKSIPKDGMVIIVET 47 (112)
Q Consensus 27 ~iL~~~~~aL~pgg~l~i~e~ 47 (112)
..++.+.+.|++||+++++-.
T Consensus 264 ~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 264 SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEEcc
Confidence 367888899999999998754
No 389
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.34 E-value=1.2e+02 Score=16.78 Aligned_cols=31 Identities=13% Similarity=0.043 Sum_probs=22.5
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeC-CceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFI-CNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vie~ 110 (112)
-|+++++++|++-| .+.++.-.. .+++.||+
T Consensus 27 ~te~~L~~~F~~fG-~V~~v~i~~~kg~aFVef 58 (104)
T 1wex_A 27 VVEADLVEALEKFG-TICYVMMMPFKRQALVEF 58 (104)
T ss_dssp CCHHHHHHHHTTTS-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHhCC-CEEEEEEECCCCEEEEEE
Confidence 48999999999988 666654333 36777775
No 390
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=21.25 E-value=1.8e+02 Score=20.04 Aligned_cols=33 Identities=6% Similarity=-0.088 Sum_probs=24.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 038113 8 GDAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIV 45 (112)
Q Consensus 8 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 45 (112)
+|++++. .+......+++++...++|+..++.+
T Consensus 100 aDvVila-----Vp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 100 VTDILIV-----VPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp CCEEEEC-----CCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCEEEEC-----CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4777664 46667889999999999988766544
No 391
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=21.11 E-value=1.2e+02 Score=16.95 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=21.5
Q ss_pred EEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 038113 10 AIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVE 46 (112)
Q Consensus 10 ~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 46 (112)
+++=..-+..++ ......|.++.+.++.|++++++.
T Consensus 49 vilDl~~v~~iD-ssgl~~L~~~~~~~~~g~~l~l~~ 84 (118)
T 3ny7_A 49 VILKWDAVPVLD-AGGLDAFQRFVKRLPEGCELRVCN 84 (118)
T ss_dssp EEEEEEECCCBC-HHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred EEEEcCCCCeec-HHHHHHHHHHHHHHHCCCEEEEec
Confidence 333333444554 445677777777666687887765
No 392
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=21.04 E-value=59 Score=20.76 Aligned_cols=35 Identities=9% Similarity=0.034 Sum_probs=21.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 038113 9 DAIYMKWILHDWSDEHCLKLFKKCYKSIPKDGMVIIVETILPK 51 (112)
Q Consensus 9 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~ 51 (112)
|+|++-.-- ...-+..+.+.|+|||.| |+|.+...
T Consensus 124 DlIfIDg~k-------~~~~~~~~l~~l~~GG~I-v~DNv~~r 158 (202)
T 3cvo_A 124 DVVLVDGRF-------RVGCALATAFSITRPVTL-LFDDYSQR 158 (202)
T ss_dssp SEEEECSSS-------HHHHHHHHHHHCSSCEEE-EETTGGGC
T ss_pred CEEEEeCCC-------chhHHHHHHHhcCCCeEE-EEeCCcCC
Confidence 888776521 124445566889999988 55655443
No 393
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=20.99 E-value=76 Score=14.56 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=13.0
Q ss_pred CHHHHHHHHHhcCCCe
Q 038113 80 TKHELMTLVTGAGFGG 95 (112)
Q Consensus 80 t~~e~~~ll~~aGf~~ 95 (112)
+.+++.+.++.+||..
T Consensus 48 ~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 48 GEEQLRTAIASAGYEV 63 (64)
T ss_dssp CHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHcCCCC
Confidence 5678888899999864
No 394
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=20.94 E-value=21 Score=23.80 Aligned_cols=20 Identities=10% Similarity=0.248 Sum_probs=15.5
Q ss_pred cCHHHHHHHHHhcCCCeeEE
Q 038113 79 RTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~ 98 (112)
.+++++.+.+-++|-..+..
T Consensus 149 ~~~d~~~e~aieaGAeDv~~ 168 (247)
T 4f3q_A 149 SDEEKIMEIALEVGAEDVTT 168 (247)
T ss_dssp CCHHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHhCCCceeee
Confidence 37888888888899877653
No 395
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=20.90 E-value=1.1e+02 Score=16.37 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=20.7
Q ss_pred cCHHHHHHHHHhcCCCeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGFGGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 110 (112)
-|+++++++|++.| .+..+. +...++.|++
T Consensus 23 ~t~~~l~~~F~~~G-~i~~v~-~~~~~afV~f 52 (103)
T 2dgu_A 23 VTEEILEKAFSQFG-KLERVK-KLKDYAFIHF 52 (103)
T ss_dssp CCHHHHHHHHHHHS-CEEEEE-ECSSCEEEEE
T ss_pred CCHHHHHHHHHhcC-CEEEEE-EECCEEEEEe
Confidence 48899999999988 554443 3344666665
No 396
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=20.62 E-value=91 Score=17.36 Aligned_cols=28 Identities=7% Similarity=-0.060 Sum_probs=22.1
Q ss_pred CChHHHHHHHHHHHhhCCC-CCEEEEEee
Q 038113 20 WSDEHCLKLFKKCYKSIPK-DGMVIIVET 47 (112)
Q Consensus 20 ~~d~~~~~iL~~~~~aL~p-gg~l~i~e~ 47 (112)
.++++..++++++...+.. ||.+.=+|.
T Consensus 14 l~~e~~~~~~~~~~~~i~~~gg~i~~~e~ 42 (101)
T 1cqm_A 14 LDQSQLALEKEIIQRALENYGARVEKVAI 42 (101)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5788899999999988875 677766664
No 397
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=20.56 E-value=28 Score=23.68 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=24.7
Q ss_pred ccEEEeccccc----cCChHHHHHHHHHHHhhCCCC--CEEEEE
Q 038113 8 GDAIYMKWILH----DWSDEHCLKLFKKCYKSIPKD--GMVIIV 45 (112)
Q Consensus 8 ~D~v~~~~vlh----~~~d~~~~~iL~~~~~aL~pg--g~l~i~ 45 (112)
+|+|+.-..-+ ..+......+|.-+.+.|+|| |.+++-
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 48887665544 111122345788888999999 988774
No 398
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.49 E-value=1.1e+02 Score=16.20 Aligned_cols=31 Identities=10% Similarity=0.001 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHhcCC-CeeEEEEeCCceEEEEE
Q 038113 79 RTKHELMTLVTGAGF-GGIRFESFICNLWVMEF 110 (112)
Q Consensus 79 rt~~e~~~ll~~aGf-~~~~~~~~~~~~~vie~ 110 (112)
-|.++++++|.+.|- .+..+ .+..+++.|++
T Consensus 27 ~t~~~l~~~F~~~g~g~v~~~-~~~~g~afV~f 58 (99)
T 2cpd_A 27 TSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHF 58 (99)
T ss_dssp CCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEE
T ss_pred CCHHHHHHHHHhcCCcceEEE-EEeCCeEEEEe
Confidence 589999999998842 44443 34445777765
No 399
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=20.35 E-value=72 Score=16.71 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=18.4
Q ss_pred CceecCHHHHHHHHHhcCCCee
Q 038113 75 GGKERTKHELMTLVTGAGFGGI 96 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~ 96 (112)
.|...|.+.+.++++.+|-++.
T Consensus 19 ~g~~~ta~~I~~il~AaGveve 40 (69)
T 2lbf_A 19 DEVTVTEDKINALIKAAGVNVE 40 (69)
T ss_dssp HTCCCCHHHHHHHHHHHTCCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCcc
Confidence 3578899999999999997654
No 400
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=20.34 E-value=73 Score=17.54 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=15.1
Q ss_pred CceecCHHHHHHHHHhcC
Q 038113 75 GGKERTKHELMTLVTGAG 92 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aG 92 (112)
....|+.++|.++.+.+|
T Consensus 68 ~As~Ys~~eW~~~~~~~~ 85 (88)
T 2jso_A 68 SASSYSPDEWERQCKVAG 85 (88)
T ss_dssp EEEECCHHHHHHHHHHTT
T ss_pred eccccCHHHHHHHHhhcc
Confidence 456789999999999876
No 401
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=20.10 E-value=96 Score=17.99 Aligned_cols=24 Identities=8% Similarity=-0.061 Sum_probs=19.0
Q ss_pred CceecCHHHHHHHHHhcCCCeeEE
Q 038113 75 GGKERTKHELMTLVTGAGFGGIRF 98 (112)
Q Consensus 75 ~g~~rt~~e~~~ll~~aGf~~~~~ 98 (112)
+-...+.++-+++|+++||+....
T Consensus 78 dv~G~~~~~A~~~L~~~Gl~v~~~ 101 (139)
T 2kuf_A 78 DLSGMFWVDAEPRLRALGWTGMLD 101 (139)
T ss_dssp CCCSCCHHHHHHHHHHHTCCSCEE
T ss_pred ccCCCCHHHHHHHHHHcCCceeeE
Confidence 434568999999999999997543
Done!