Query 038117
Match_columns 500
No_of_seqs 178 out of 930
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 07:45:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038117.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038117hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 7E-117 2E-121 879.0 36.3 435 48-496 42-489 (492)
2 PF05577 Peptidase_S28: Serine 100.0 1E-104 3E-109 843.4 21.6 401 58-480 1-434 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 1E-102 2E-107 798.3 33.2 419 48-492 48-503 (514)
4 PF05576 Peptidase_S37: PS-10 100.0 2.2E-58 4.8E-63 463.5 20.6 395 24-489 3-412 (448)
5 PLN02298 hydrolase, alpha/beta 98.3 7.3E-06 1.6E-10 83.8 11.9 84 118-212 86-169 (330)
6 TIGR01250 pro_imino_pep_2 prol 98.2 7.9E-06 1.7E-10 79.8 10.8 106 88-211 25-130 (288)
7 PLN02385 hydrolase; alpha/beta 98.2 1.6E-05 3.5E-10 82.1 12.9 86 113-211 110-196 (349)
8 TIGR01840 esterase_phb esteras 98.1 1.3E-05 2.8E-10 76.9 9.4 119 88-213 12-131 (212)
9 TIGR01249 pro_imino_pep_1 prol 98.1 1.5E-05 3.2E-10 80.8 10.1 104 88-212 27-130 (306)
10 PF12697 Abhydrolase_6: Alpha/ 98.1 1.6E-05 3.4E-10 74.2 9.5 102 91-213 1-102 (228)
11 TIGR02427 protocat_pcaD 3-oxoa 98.0 1.3E-05 2.8E-10 76.3 8.0 103 88-212 12-114 (251)
12 PHA02857 monoglyceride lipase; 98.0 7.7E-05 1.7E-09 73.9 12.1 108 89-212 25-132 (276)
13 PRK10749 lysophospholipase L2; 98.0 0.00012 2.5E-09 75.2 13.5 110 88-211 53-165 (330)
14 PRK00870 haloalkane dehalogena 97.9 0.0001 2.2E-09 74.4 12.6 117 71-210 32-148 (302)
15 PRK10566 esterase; Provisional 97.9 0.00013 2.8E-09 71.1 12.1 107 88-204 26-134 (249)
16 TIGR03056 bchO_mg_che_rel puta 97.9 6.4E-05 1.4E-09 73.7 9.5 104 88-212 27-130 (278)
17 TIGR03695 menH_SHCHC 2-succiny 97.9 0.00011 2.4E-09 69.5 10.7 78 118-211 26-104 (251)
18 TIGR03611 RutD pyrimidine util 97.8 6.4E-05 1.4E-09 72.3 8.3 102 87-209 11-112 (257)
19 PRK10673 acyl-CoA esterase; Pr 97.8 0.00012 2.6E-09 71.2 9.9 97 88-208 16-112 (255)
20 PLN02824 hydrolase, alpha/beta 97.7 0.0003 6.4E-09 70.5 11.8 90 110-212 48-137 (294)
21 TIGR02240 PHA_depoly_arom poly 97.7 0.00015 3.2E-09 72.0 9.3 113 74-212 13-126 (276)
22 PRK03592 haloalkane dehalogena 97.7 0.00025 5.3E-09 71.1 10.8 104 86-212 25-128 (295)
23 PLN02211 methyl indole-3-aceta 97.7 0.00037 8.1E-09 69.6 11.3 76 119-210 45-120 (273)
24 PRK08775 homoserine O-acetyltr 97.6 0.00028 6.1E-09 72.7 9.9 104 87-209 56-170 (343)
25 PRK11126 2-succinyl-6-hydroxy- 97.6 0.00043 9.3E-09 66.8 10.3 74 119-211 27-101 (242)
26 TIGR01607 PST-A Plasmodium sub 97.6 0.00033 7.2E-09 72.1 9.9 88 117-213 72-186 (332)
27 PF00561 Abhydrolase_1: alpha/ 97.6 0.00019 4.2E-09 67.9 7.4 76 122-211 3-78 (230)
28 TIGR03343 biphenyl_bphD 2-hydr 97.5 0.00034 7.3E-09 69.2 8.9 77 118-211 59-135 (282)
29 TIGR03101 hydr2_PEP hydrolase, 97.5 0.0014 2.9E-08 65.5 13.1 107 89-212 25-134 (266)
30 PLN02965 Probable pheophorbida 97.5 0.00071 1.5E-08 66.4 10.8 103 88-210 3-105 (255)
31 PLN02511 hydrolase 97.5 0.00055 1.2E-08 72.0 10.5 107 87-212 98-210 (388)
32 PLN03084 alpha/beta hydrolase 97.5 0.00067 1.4E-08 71.3 10.7 86 111-212 147-232 (383)
33 PLN02894 hydrolase, alpha/beta 97.5 0.0013 2.8E-08 69.6 12.6 106 88-210 104-209 (402)
34 PLN02652 hydrolase; alpha/beta 97.4 0.0014 3E-08 69.2 12.6 80 118-212 162-245 (395)
35 TIGR01738 bioH putative pimelo 97.4 0.00045 9.8E-09 65.4 8.0 66 119-207 30-95 (245)
36 TIGR02821 fghA_ester_D S-formy 97.4 0.0033 7.1E-08 62.8 14.5 121 88-212 41-173 (275)
37 PF00326 Peptidase_S9: Prolyl 97.4 0.00013 2.8E-09 69.8 4.0 94 112-213 7-100 (213)
38 KOG1455 Lysophospholipase [Lip 97.3 0.0027 5.9E-08 63.4 12.2 108 91-216 56-167 (313)
39 KOG4178 Soluble epoxide hydrol 97.3 0.0017 3.6E-08 65.6 10.4 118 75-213 32-149 (322)
40 PRK14875 acetoin dehydrogenase 97.3 0.002 4.2E-08 66.6 11.2 74 120-211 158-231 (371)
41 PRK03204 haloalkane dehalogena 97.3 0.0015 3.2E-08 65.6 9.8 76 119-211 60-135 (286)
42 PRK10985 putative hydrolase; P 97.3 0.0015 3.3E-08 66.9 10.0 85 115-213 83-169 (324)
43 COG2267 PldB Lysophospholipase 97.2 0.0024 5.2E-08 64.8 11.2 83 116-212 58-142 (298)
44 TIGR00976 /NonD putative hydro 97.2 0.0016 3.4E-08 71.8 10.5 111 88-213 21-133 (550)
45 PLN02578 hydrolase 97.2 0.0012 2.6E-08 68.4 9.0 99 86-207 84-182 (354)
46 TIGR03100 hydr1_PEP hydrolase, 97.2 0.0037 8E-08 62.4 11.6 105 89-212 27-134 (274)
47 PRK10349 carboxylesterase BioH 97.2 0.00098 2.1E-08 65.2 7.3 94 86-207 10-104 (256)
48 KOG2564 Predicted acetyltransf 97.1 0.0028 6.1E-08 62.5 9.8 120 54-195 45-164 (343)
49 PRK05077 frsA fermentation/res 97.1 0.0022 4.8E-08 68.1 9.9 109 87-213 192-301 (414)
50 PLN02679 hydrolase, alpha/beta 97.1 0.0023 4.9E-08 66.6 9.2 76 119-211 114-190 (360)
51 PF11144 DUF2920: Protein of u 97.1 0.0044 9.5E-08 64.6 11.0 133 77-214 26-221 (403)
52 PLN02980 2-oxoglutarate decarb 97.0 0.0026 5.7E-08 78.4 9.9 120 76-210 1357-1478(1655)
53 PF10503 Esterase_phd: Esteras 97.0 0.0053 1.1E-07 59.5 9.9 117 88-212 15-132 (220)
54 PRK06489 hypothetical protein; 96.9 0.02 4.4E-07 59.4 14.1 111 88-209 69-186 (360)
55 PRK05855 short chain dehydroge 96.8 0.0027 5.8E-08 69.6 7.8 79 119-212 51-131 (582)
56 PLN03087 BODYGUARD 1 domain co 96.8 0.0038 8.3E-08 67.4 8.7 105 89-212 202-309 (481)
57 cd00707 Pancreat_lipase_like P 96.8 0.0047 1E-07 61.9 8.8 109 82-207 30-142 (275)
58 TIGR01836 PHA_synth_III_C poly 96.8 0.012 2.5E-07 61.0 11.7 87 109-213 85-172 (350)
59 TIGR03230 lipo_lipase lipoprot 96.7 0.016 3.5E-07 61.7 12.5 109 80-204 33-146 (442)
60 PLN02442 S-formylglutathione h 96.6 0.017 3.7E-07 58.0 10.9 123 86-212 44-178 (283)
61 PF09752 DUF2048: Uncharacteri 96.6 0.014 2.9E-07 59.9 9.9 150 47-203 49-201 (348)
62 PRK11460 putative hydrolase; P 96.5 0.019 4.2E-07 55.9 10.2 59 154-212 80-138 (232)
63 PF07859 Abhydrolase_3: alpha/ 96.4 0.0069 1.5E-07 57.4 6.3 103 91-212 1-110 (211)
64 COG1506 DAP2 Dipeptidyl aminop 96.4 0.0066 1.4E-07 67.9 6.8 110 90-215 395-510 (620)
65 TIGR03502 lipase_Pla1_cef extr 96.3 0.017 3.7E-07 65.5 9.8 104 88-197 448-575 (792)
66 PRK10115 protease 2; Provision 96.3 0.018 3.9E-07 65.2 9.9 116 89-214 445-561 (686)
67 PRK07581 hypothetical protein; 96.3 0.011 2.5E-07 60.5 7.7 111 88-208 40-155 (339)
68 PF12695 Abhydrolase_5: Alpha/ 96.2 0.011 2.3E-07 52.1 6.2 93 90-210 1-93 (145)
69 PF00975 Thioesterase: Thioest 96.1 0.01 2.2E-07 56.9 6.1 81 89-195 1-84 (229)
70 PRK10162 acetyl esterase; Prov 95.9 0.054 1.2E-06 55.4 10.6 107 71-200 67-177 (318)
71 KOG4391 Predicted alpha/beta h 95.8 0.019 4.2E-07 54.8 6.1 144 77-251 70-218 (300)
72 KOG2382 Predicted alpha/beta h 95.7 0.15 3.3E-06 51.6 12.5 98 87-202 51-149 (315)
73 TIGR01392 homoserO_Ac_trn homo 95.7 0.025 5.3E-07 58.5 7.1 88 119-212 72-162 (351)
74 cd00312 Esterase_lipase Estera 95.6 0.035 7.5E-07 60.1 7.8 114 87-213 93-214 (493)
75 PTZ00472 serine carboxypeptida 95.4 0.068 1.5E-06 57.6 9.2 67 119-195 121-189 (462)
76 PLN00021 chlorophyllase 95.3 0.076 1.6E-06 54.3 8.8 112 87-213 50-166 (313)
77 COG0596 MhpC Predicted hydrola 95.0 0.046 9.9E-07 51.0 5.9 101 90-213 23-124 (282)
78 PLN02209 serine carboxypeptida 94.9 1.1 2.5E-05 47.9 16.6 85 119-213 117-213 (437)
79 COG0657 Aes Esterase/lipase [L 94.8 0.15 3.1E-06 51.8 9.4 92 87-197 77-172 (312)
80 COG3509 LpqC Poly(3-hydroxybut 94.7 0.24 5.3E-06 49.6 10.1 110 87-211 59-180 (312)
81 PRK10439 enterobactin/ferric e 94.6 0.32 6.9E-06 51.7 11.5 49 164-212 273-323 (411)
82 KOG1282 Serine carboxypeptidas 94.4 0.56 1.2E-05 50.3 12.6 71 119-198 117-193 (454)
83 COG0429 Predicted hydrolase of 94.3 0.33 7.1E-06 49.5 10.2 125 71-213 59-186 (345)
84 PLN02872 triacylglycerol lipas 94.2 0.19 4E-06 53.2 8.7 106 88-200 74-182 (395)
85 KOG2281 Dipeptidyl aminopeptid 94.2 0.054 1.2E-06 59.0 4.6 92 113-213 670-763 (867)
86 PF00756 Esterase: Putative es 94.2 0.048 1E-06 53.1 4.0 51 163-213 101-151 (251)
87 PF05677 DUF818: Chlamydia CHL 93.9 0.31 6.6E-06 49.9 9.1 100 86-200 135-238 (365)
88 PF02129 Peptidase_S15: X-Pro 93.5 0.18 4E-06 50.1 6.8 113 88-214 19-138 (272)
89 PF07819 PGAP1: PGAP1-like pro 93.3 0.59 1.3E-05 45.4 9.8 54 161-214 66-125 (225)
90 PF03403 PAF-AH_p_II: Platelet 93.1 0.39 8.5E-06 50.4 8.8 39 89-130 100-138 (379)
91 COG2021 MET2 Homoserine acetyl 93.0 0.14 3.1E-06 52.7 5.0 68 158-232 129-199 (368)
92 PRK00175 metX homoserine O-ace 93.0 0.51 1.1E-05 49.4 9.4 87 119-211 91-181 (379)
93 KOG1553 Predicted alpha/beta h 92.9 0.51 1.1E-05 48.1 8.7 122 94-249 246-369 (517)
94 PLN03016 sinapoylglucose-malat 92.5 1.8 4E-05 46.3 12.9 84 120-213 116-211 (433)
95 KOG4409 Predicted hydrolase/ac 92.3 0.46 9.9E-06 48.8 7.5 101 89-213 91-197 (365)
96 PRK13604 luxD acyl transferase 91.3 1.2 2.6E-05 45.4 9.3 126 59-210 9-139 (307)
97 PRK11071 esterase YqiA; Provis 91.0 1 2.2E-05 42.4 8.1 39 156-200 46-84 (190)
98 KOG1838 Alpha/beta hydrolase [ 90.5 1.2 2.6E-05 46.9 8.7 141 57-213 77-236 (409)
99 COG1770 PtrB Protease II [Amin 89.7 1.8 3.9E-05 47.9 9.5 144 53-212 401-562 (682)
100 KOG2100 Dipeptidyl aminopeptid 89.7 0.94 2E-05 51.9 7.8 116 88-214 525-645 (755)
101 KOG1552 Predicted alpha/beta h 89.7 2.7 5.7E-05 41.5 9.8 117 69-209 43-160 (258)
102 PRK06765 homoserine O-acetyltr 89.5 0.43 9.2E-06 50.4 4.6 51 152-208 141-192 (389)
103 COG4099 Predicted peptidase [G 88.8 1.6 3.4E-05 44.0 7.6 58 150-209 244-301 (387)
104 COG0412 Dienelactone hydrolase 88.1 5.3 0.00011 39.1 10.9 58 152-210 87-144 (236)
105 COG0400 Predicted esterase [Ge 88.1 0.93 2E-05 43.5 5.4 56 157-212 79-134 (207)
106 PLN02733 phosphatidylcholine-s 88.0 0.63 1.4E-05 49.8 4.7 47 154-202 141-187 (440)
107 PF11187 DUF2974: Protein of u 88.0 1 2.2E-05 43.8 5.8 49 160-211 70-122 (224)
108 PF00135 COesterase: Carboxyle 87.5 1.5 3.2E-05 47.5 7.4 113 89-214 125-247 (535)
109 TIGR01838 PHA_synth_I poly(R)- 87.0 3.8 8.1E-05 45.1 10.0 105 88-212 188-302 (532)
110 KOG1454 Predicted hydrolase/ac 86.9 2.3 5E-05 43.7 8.0 30 177-206 128-157 (326)
111 COG2819 Predicted hydrolase of 86.2 0.9 2E-05 45.0 4.2 47 168-214 128-174 (264)
112 COG3208 GrsT Predicted thioest 86.1 0.63 1.4E-05 45.5 3.0 59 150-212 51-114 (244)
113 PF02230 Abhydrolase_2: Phosph 85.9 1.2 2.7E-05 42.4 5.0 57 156-213 85-141 (216)
114 PF06259 Abhydrolase_8: Alpha/ 85.7 2 4.3E-05 40.2 6.1 59 154-213 87-146 (177)
115 PF10230 DUF2305: Uncharacteri 85.1 6.7 0.00014 39.1 10.0 101 90-199 3-106 (266)
116 PRK05371 x-prolyl-dipeptidyl a 84.8 4.1 8.8E-05 46.9 9.3 86 113-211 273-372 (767)
117 COG1647 Esterase/lipase [Gener 84.1 11 0.00023 36.6 10.2 81 119-217 42-123 (243)
118 PF05728 UPF0227: Uncharacteri 83.8 1.6 3.4E-05 41.2 4.6 43 152-200 40-82 (187)
119 PF06500 DUF1100: Alpha/beta h 83.4 1.6 3.4E-05 46.1 4.8 138 50-215 162-299 (411)
120 PF08840 BAAT_C: BAAT / Acyl-C 83.3 2.4 5.3E-05 40.7 5.8 39 175-214 20-58 (213)
121 PF01764 Lipase_3: Lipase (cla 83.2 1.7 3.6E-05 38.1 4.2 43 168-212 57-105 (140)
122 KOG4627 Kynurenine formamidase 83.0 15 0.00033 35.3 10.6 100 88-209 66-169 (270)
123 PF05448 AXE1: Acetyl xylan es 82.9 3.8 8.3E-05 42.0 7.3 117 88-209 82-206 (320)
124 cd00741 Lipase Lipase. Lipase 82.1 2.6 5.6E-05 37.9 5.1 38 175-212 26-67 (153)
125 PRK07868 acyl-CoA synthetase; 81.9 13 0.00028 44.2 12.2 108 88-212 67-177 (994)
126 PF00450 Peptidase_S10: Serine 81.9 2.8 6E-05 43.9 6.1 86 119-213 85-182 (415)
127 PRK10252 entF enterobactin syn 81.9 7.9 0.00017 47.0 10.7 92 88-205 1068-1164(1296)
128 PF07519 Tannase: Tannase and 79.8 2.8 6E-05 45.5 5.3 63 151-213 80-151 (474)
129 PLN02571 triacylglycerol lipas 79.2 3.1 6.7E-05 44.0 5.2 39 155-197 208-246 (413)
130 COG3319 Thioesterase domains o 78.9 3.9 8.4E-05 40.6 5.5 41 152-197 45-85 (257)
131 PLN02454 triacylglycerol lipas 77.5 7.8 0.00017 41.1 7.5 40 157-196 208-247 (414)
132 PF01738 DLH: Dienelactone hyd 77.4 1.7 3.7E-05 41.4 2.5 45 154-198 75-119 (218)
133 PF03096 Ndr: Ndr family; Int 77.2 3.9 8.5E-05 41.1 5.0 58 146-209 74-131 (283)
134 cd00519 Lipase_3 Lipase (class 77.0 6 0.00013 38.1 6.2 34 161-196 114-147 (229)
135 PLN02310 triacylglycerol lipas 76.4 6.3 0.00014 41.6 6.5 55 155-211 189-247 (405)
136 PLN03037 lipase class 3 family 76.3 5.9 0.00013 43.0 6.4 55 155-211 298-357 (525)
137 PLN02408 phospholipase A1 75.3 4.2 9.1E-05 42.4 4.8 38 155-196 182-219 (365)
138 PF01738 DLH: Dienelactone hyd 75.2 2.6 5.7E-05 40.1 3.2 8 89-96 14-21 (218)
139 COG4757 Predicted alpha/beta h 75.1 6.7 0.00015 38.3 5.7 73 112-194 50-122 (281)
140 PF02450 LCAT: Lecithin:choles 74.8 5.7 0.00012 41.9 5.8 57 154-213 99-161 (389)
141 COG0627 Predicted esterase [Ge 73.6 9.5 0.00021 39.1 6.9 119 87-213 52-188 (316)
142 KOG1515 Arylacetamide deacetyl 73.6 19 0.00041 37.3 9.1 95 88-197 89-186 (336)
143 PF12146 Hydrolase_4: Putative 73.5 7.7 0.00017 31.1 5.0 60 89-166 16-79 (79)
144 PLN02324 triacylglycerol lipas 73.2 5.7 0.00012 42.0 5.2 38 155-196 197-234 (415)
145 PLN02802 triacylglycerol lipas 73.0 9 0.00019 41.5 6.7 25 171-195 324-348 (509)
146 PF08538 DUF1749: Protein of u 71.3 38 0.00082 34.5 10.4 105 90-213 34-148 (303)
147 PLN02761 lipase class 3 family 70.9 5.7 0.00012 43.1 4.7 41 155-195 272-312 (527)
148 PF01674 Lipase_2: Lipase (cla 69.2 13 0.00028 36.0 6.4 40 156-198 57-96 (219)
149 PLN02753 triacylglycerol lipas 68.6 6.7 0.00015 42.7 4.6 41 155-196 291-331 (531)
150 PF06057 VirJ: Bacterial virul 67.3 11 0.00024 35.7 5.2 56 152-209 45-100 (192)
151 PRK10673 acyl-CoA esterase; Pr 65.8 5.6 0.00012 38.1 3.2 58 421-490 196-254 (255)
152 PF06821 Ser_hydrolase: Serine 65.4 15 0.00031 34.1 5.7 91 92-213 1-92 (171)
153 KOG2984 Predicted hydrolase [G 65.0 7.1 0.00015 37.3 3.5 106 91-213 45-152 (277)
154 PRK04940 hypothetical protein; 62.9 16 0.00034 34.4 5.4 53 153-209 38-90 (180)
155 PLN02162 triacylglycerol lipas 61.4 14 0.00029 39.8 5.2 20 175-194 276-295 (475)
156 PLN02719 triacylglycerol lipas 59.2 14 0.0003 40.1 4.9 37 155-195 277-316 (518)
157 PLN00413 triacylglycerol lipas 58.6 14 0.00031 39.7 4.8 21 175-195 282-302 (479)
158 KOG4569 Predicted lipase [Lipi 57.2 14 0.00031 38.1 4.5 20 176-195 170-189 (336)
159 PLN02934 triacylglycerol lipas 56.7 10 0.00022 41.1 3.4 21 175-195 319-339 (515)
160 COG2272 PnbA Carboxylesterase 56.4 49 0.0011 35.8 8.4 106 87-199 92-201 (491)
161 PLN02213 sinapoylglucose-malat 55.7 34 0.00074 34.9 7.0 42 154-196 28-74 (319)
162 PLN02385 hydrolase; alpha/beta 52.3 20 0.00042 36.8 4.6 63 421-492 280-346 (349)
163 PF03583 LIP: Secretory lipase 49.7 43 0.00093 33.7 6.5 84 115-212 22-113 (290)
164 KOG3724 Negative regulator of 49.6 22 0.00048 40.5 4.6 58 156-214 150-222 (973)
165 KOG3847 Phospholipase A2 (plat 49.6 49 0.0011 33.9 6.6 37 89-128 118-154 (399)
166 PHA02857 monoglyceride lipase; 49.5 24 0.00051 34.5 4.5 59 421-490 210-272 (276)
167 KOG2369 Lecithin:cholesterol a 49.3 29 0.00063 37.2 5.3 46 155-202 162-207 (473)
168 KOG2931 Differentiation-relate 48.3 43 0.00094 33.9 6.0 56 146-207 97-152 (326)
169 PF07519 Tannase: Tannase and 48.0 30 0.00064 37.6 5.3 66 416-491 349-427 (474)
170 TIGR03611 RutD pyrimidine util 47.1 17 0.00036 34.2 3.0 57 421-489 199-256 (257)
171 KOG1454 Predicted hydrolase/ac 46.7 18 0.00039 37.2 3.3 42 421-462 265-307 (326)
172 COG3544 Uncharacterized protei 46.3 18 0.0004 33.8 2.8 24 471-494 167-190 (190)
173 PF12715 Abhydrolase_7: Abhydr 46.1 69 0.0015 33.7 7.3 117 86-212 112-260 (390)
174 PLN02679 hydrolase, alpha/beta 45.4 33 0.00072 35.5 5.1 55 422-490 294-356 (360)
175 PF07632 DUF1593: Protein of u 44.3 35 0.00075 33.9 4.6 50 153-206 127-178 (260)
176 TIGR03100 hydr1_PEP hydrolase, 42.8 23 0.0005 35.1 3.3 55 421-489 208-273 (274)
177 KOG3975 Uncharacterized conser 41.6 1.2E+02 0.0025 30.3 7.6 107 71-188 14-121 (301)
178 PRK11460 putative hydrolase; P 40.6 32 0.0007 33.2 3.8 54 421-484 149-209 (232)
179 PRK00091 miaA tRNA delta(2)-is 40.5 93 0.002 31.7 7.3 35 89-128 4-38 (307)
180 PF03283 PAE: Pectinacetyleste 40.4 1.2E+02 0.0026 31.7 8.2 38 178-215 157-199 (361)
181 smart00824 PKS_TE Thioesterase 38.7 1.3E+02 0.0029 27.1 7.6 68 112-198 16-85 (212)
182 COG4947 Uncharacterized protei 37.5 22 0.00048 33.2 2.0 111 86-215 24-139 (227)
183 TIGR03343 biphenyl_bphD 2-hydr 35.8 36 0.00078 33.1 3.4 39 422-462 225-266 (282)
184 PF05057 DUF676: Putative seri 35.1 51 0.0011 31.5 4.2 45 152-196 53-97 (217)
185 PLN02298 hydrolase, alpha/beta 35.1 45 0.00097 33.7 4.0 62 421-491 252-317 (330)
186 PF06028 DUF915: Alpha/beta hy 34.3 51 0.0011 32.7 4.1 44 153-198 81-124 (255)
187 PF00326 Peptidase_S9: Prolyl 34.2 49 0.0011 31.0 3.9 60 420-492 144-210 (213)
188 COG2382 Fes Enterochelin ester 34.1 31 0.00068 34.9 2.6 51 164-214 162-214 (299)
189 PLN02824 hydrolase, alpha/beta 34.0 35 0.00075 33.7 3.0 56 422-489 236-292 (294)
190 TIGR01249 pro_imino_pep_1 prol 33.9 38 0.00083 33.9 3.3 39 422-460 250-289 (306)
191 PF12740 Chlorophyllase2: Chlo 33.2 99 0.0022 30.8 5.9 102 89-213 17-131 (259)
192 PLN03084 alpha/beta hydrolase 33.1 32 0.00069 36.2 2.6 41 422-462 327-367 (383)
193 COG5153 CVT17 Putative lipase 32.3 58 0.0013 32.9 4.0 37 175-214 274-310 (425)
194 KOG4540 Putative lipase essent 32.3 58 0.0013 32.9 4.0 37 175-214 274-310 (425)
195 TIGR01738 bioH putative pimelo 32.2 32 0.00069 31.8 2.3 42 421-462 189-231 (245)
196 KOG4840 Predicted hydrolases o 31.7 1.6E+02 0.0035 28.8 6.8 82 89-188 36-118 (299)
197 PF11339 DUF3141: Protein of u 31.5 79 0.0017 34.6 5.2 53 161-214 125-177 (581)
198 KOG2237 Predicted serine prote 31.3 35 0.00075 38.1 2.5 62 150-212 522-584 (712)
199 PF07172 GRP: Glycine rich pro 31.0 29 0.00062 29.1 1.5 20 1-20 1-21 (95)
200 KOG1516 Carboxylesterase and r 31.0 1.1E+02 0.0024 33.4 6.6 115 89-213 112-233 (545)
201 PF10340 DUF2424: Protein of u 30.4 2.9E+02 0.0062 29.1 9.0 19 177-195 195-213 (374)
202 TIGR03695 menH_SHCHC 2-succiny 30.3 28 0.00061 32.1 1.5 40 421-462 195-236 (251)
203 PF01221 Dynein_light: Dynein 29.6 44 0.00094 27.3 2.3 28 159-189 36-65 (89)
204 PLN02847 triacylglycerol lipas 29.3 65 0.0014 35.8 4.2 116 70-207 162-287 (633)
205 PF11288 DUF3089: Protein of u 28.8 1.1E+02 0.0023 29.5 5.2 42 155-198 74-116 (207)
206 KOG4667 Predicted esterase [Li 28.7 1.4E+02 0.003 29.1 5.8 76 110-200 50-128 (269)
207 COG3946 VirJ Type IV secretory 27.9 72 0.0016 33.8 4.0 35 152-188 303-337 (456)
208 TIGR01839 PHA_synth_II poly(R) 27.5 3.4E+02 0.0074 30.2 9.3 86 111-213 239-329 (560)
209 PLN02517 phosphatidylcholine-s 27.4 88 0.0019 34.9 4.8 41 155-197 193-233 (642)
210 COG3458 Acetyl esterase (deace 27.4 51 0.0011 33.1 2.7 40 160-199 159-198 (321)
211 PRK14875 acetoin dehydrogenase 26.7 66 0.0014 32.7 3.7 55 421-489 315-369 (371)
212 TIGR01250 pro_imino_pep_2 prol 25.8 38 0.00083 32.3 1.6 40 421-462 232-273 (288)
213 TIGR02427 protocat_pcaD 3-oxoa 25.8 67 0.0014 29.6 3.2 42 421-462 194-236 (251)
214 PRK10749 lysophospholipase L2; 25.4 1.2E+02 0.0025 30.8 5.2 61 421-490 260-328 (330)
215 PRK00870 haloalkane dehalogena 24.9 73 0.0016 31.6 3.5 57 421-490 240-300 (302)
216 PF07992 Pyr_redox_2: Pyridine 24.8 50 0.0011 30.3 2.1 20 178-197 1-20 (201)
217 PLN02511 hydrolase 24.1 1.5E+02 0.0033 31.0 5.9 42 421-464 299-344 (388)
218 PRK10162 acetyl esterase; Prov 24.0 1.1E+02 0.0025 30.9 4.8 42 421-464 249-295 (318)
219 TIGR00174 miaA tRNA isopenteny 23.9 2.7E+02 0.0059 28.1 7.3 32 91-127 1-32 (287)
220 KOG3043 Predicted hydrolase re 23.0 2.1E+02 0.0046 28.0 5.9 68 423-492 167-241 (242)
221 smart00580 PUG domain in prote 23.0 31 0.00067 26.0 0.3 47 157-203 2-50 (58)
222 PLN02840 tRNA dimethylallyltra 22.0 3.9E+02 0.0085 28.6 8.3 35 88-127 20-54 (421)
223 PLN03058 dynein light chain ty 21.8 90 0.0019 27.6 2.9 27 159-188 69-97 (128)
224 PRK08233 hypothetical protein; 21.5 3.9E+02 0.0084 23.9 7.5 85 90-187 4-88 (182)
225 PLN02165 adenylate isopentenyl 20.7 2.4E+02 0.0051 29.3 6.2 36 88-128 42-77 (334)
226 PF02230 Abhydrolase_2: Phosph 20.5 94 0.002 29.4 3.1 38 421-460 156-200 (216)
227 COG0324 MiaA tRNA delta(2)-iso 20.1 4.3E+02 0.0093 27.0 7.8 72 108-186 17-102 (308)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=7.4e-117 Score=879.03 Aligned_cols=435 Identities=44% Similarity=0.836 Sum_probs=400.8
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEee
Q 038117 48 NHGFETFFYNQTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEH 127 (500)
Q Consensus 48 ~~~~~~~~f~Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEH 127 (500)
..++++.||.|+||||+++ +..||+|||++|++||++.+||||+|+|+||+++.+..++|||.++|.+++|++|+.||
T Consensus 42 ~~~ye~~yf~q~LDHFsF~--~~~tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEH 119 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFT--DNKTFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEH 119 (492)
T ss_pred cccceeEEeeccccccccc--CccceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeeh
Confidence 4579999999999999987 56999999999999995444999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe
Q 038117 128 RYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA 207 (500)
Q Consensus 128 RyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA 207 (500)
||||+|+||++ .++++.++|.|||+||||||+|.+++++|+++++..+|||+||||||||||||||+||||++.||+|
T Consensus 120 RyYGeS~PFG~--~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlA 197 (492)
T KOG2183|consen 120 RYYGESLPFGS--QSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALA 197 (492)
T ss_pred hccccCCCCcc--hhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhh
Confidence 99999999995 4678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCcchhhHHHHHhhhcCChHHHHHHHHHHHHHHhhhcCcchHHHHHHhcccCCCCC-ChhhHHHHHHHH
Q 038117 208 SSAPILYYGDITPWTTYHSVVSKDFRDTSEECFQTIKKSWSEIDNIASKPDGLAILSKKFKTCTPLK-NTTELKDGLDTV 286 (500)
Q Consensus 208 SSApv~a~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~F~~c~~l~-~~~~~~~~l~~~ 286 (500)
|||||+.+.|.+|...|+.+|+++|+..+++|+..|+++|.+|+++..++++++.|.+.|++|.+++ |..++.+|++++
T Consensus 198 aSAPvl~f~d~vp~~~f~~ivT~~F~~as~~C~~~I~~sW~ai~~l~~~~nG~q~Ls~~f~lc~~ln~d~~~l~d~l~ea 277 (492)
T KOG2183|consen 198 ASAPVLYFEDTVPKDVFYRIVTRDFKDASPNCRNTIRKSWDAIDRLAAKDNGLQILSKAFKLCKPLNDDIGDLKDYLREA 277 (492)
T ss_pred ccCceEeecCCCCcchhhhHHHHHHHhhcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHhhhcccccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 778899999999
Q ss_pred HHhhhhcCCC---------CCCcHHHhchhhhCCCCCCChHHHHHHHHHhhcccccccCCCCccccCCCCC--CCCCCCc
Q 038117 287 YSEAAQYDTP---------SNIPVKRICNAIENAPNCGDDILCKIAAGVVEADSLEYDGNNSRCYINEDRT--GDESDEG 355 (500)
Q Consensus 287 ~~~~~q~~~~---------~~~~i~~~C~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~g~~~~C~~~~~~~--~~~~~R~ 355 (500)
+.+++|.+|| |++||.++|+.|........+.+++++++++. ++||+|+ ..|++.++.+ ...+.|.
T Consensus 278 ~~ylAMVdYPy~t~Fl~pLPa~PV~~~C~~i~~~~~~~~~ll~~i~a~~~~--yyNytg~-~~C~d~sd~t~~~~~d~~g 354 (492)
T KOG2183|consen 278 YEYLAMVDYPYPTSFLAPLPAWPVKVVCKYINAPGPNDSDLLDRIFAAVNL--YYNYTGS-EKCYDISDPTYGSGLDDLG 354 (492)
T ss_pred HHHHHHhcCCCCccccCcCCCCcHHHHHHHhccCCCChHHHHHHHHHHhhh--eeccCCC-cchhccccccCCCCCCcCC
Confidence 8877776655 58999999999987653446788999988764 5678888 7899996432 2446799
Q ss_pred ceeeeeccccccccCC-CCCCCCCCCCChhhHHHHhhhhcCCCCCccccccccccccchhcccCCccEEEEEcCCCCccC
Q 038117 356 WEWQSCSEMVVPMGKD-KNSMYQPEPWNLTKYIKNCKEQYGVSPRPSWVLTYYGGHDIKLILRRSTSNIIFSNGMRDPFS 434 (500)
Q Consensus 356 W~yQtCtE~g~~~t~~-~~~~f~~~~~~~~~~~~~C~~~FG~~~~~~~~n~~yGG~~~~~~~~~~~sniiFtnG~~DPW~ 434 (500)
|.||+|||+.+|++++ .++||+..+++.+.+.+.|.+.||+.|+|+|+++.|||.++. ..|||||+||.+|||+
T Consensus 355 W~~QaCtEmVMp~~~ng~~~mf~~~~fn~~~y~e~C~~~~~v~prP~wi~t~fgg~~l~-----~~SNiIFSNG~LDPWS 429 (492)
T KOG2183|consen 355 WPWQACTEMVMPMCSNGVDDMFPDCPFNSESYQEGCMQTFGVTPRPKWITTEFGGADLS-----AFSNIIFSNGLLDPWS 429 (492)
T ss_pred CchhhhhhhhhccccCCCcccCCCCCCCHHHHHHHHHHhcCCCCCCcceehhhccccch-----hhcceeeeCCCcCCcc
Confidence 9999999999999988 579999899999999999999999999999999999998876 4699999999999999
Q ss_pred CCCccccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 038117 435 RGGWVKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQYYDDFK 496 (500)
Q Consensus 435 ~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e~~~~~~ 496 (500)
.+|++++.+ .++++++|++|+||.||+.+++.||++|+.+|++|+++|++||++++....
T Consensus 430 GGGV~~nis--~svvav~~k~GAHHlDLR~~~~~DP~~v~~aR~~Ei~iI~~WI~~~~r~~~ 489 (492)
T KOG2183|consen 430 GGGVLKNIS--DSVVAVTIKEGAHHLDLRASHPEDPESVVEARELEIQIIKKWIKEFYRVLG 489 (492)
T ss_pred CcCeecccc--CcEEEEEecCCccceeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999988 789999999999999999999999999999999999999999999987654
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=1.3e-104 Score=843.44 Aligned_cols=401 Identities=34% Similarity=0.632 Sum_probs=285.0
Q ss_pred eecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCC
Q 038117 58 QTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFG 137 (500)
Q Consensus 58 Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~ 137 (500)
|+||||+++ +.+||+||||+|++|| +++||||||+|||++++......|++.++|+++||++|+|||||||+|+|++
T Consensus 1 Q~lDHf~~~--~~~tf~qRY~~n~~~~-~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~ 77 (434)
T PF05577_consen 1 QPLDHFNPS--NNGTFSQRYWVNDQYY-KPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFG 77 (434)
T ss_dssp EES-SS-SS--TT-EEEEEEEEE-TT---TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTG
T ss_pred CCCCCCCCC--CCCeEEEEEEEEhhhc-CCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCcc
Confidence 999999943 5699999999999999 8889999999999999887777889999999999999999999999999999
Q ss_pred CchhhccccccccCCCHHHHHHHHHHHHHHHhhhc-CCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccccc
Q 038117 138 SRKAALKNARHRGYFNSAQALADYASILLHIKDKY-NATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILYYG 216 (500)
Q Consensus 138 ~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~-~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~~ 216 (500)
++ +++||||||++|||||+|+||+++|.++ ..+++|||+||||||||||||+|+||||+|+|||||||||+++.
T Consensus 78 ~~-----s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~ 152 (434)
T PF05577_consen 78 DL-----STENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKV 152 (434)
T ss_dssp GG-----GGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCC
T ss_pred cc-----chhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeec
Confidence 75 6799999999999999999999999876 45788999999999999999999999999999999999999988
Q ss_pred CCCCcchhhHHHHHhhhcCChHHHHHHHHHHHHHHhhhcCcchHHHHHHhcccCCCCCCh--hhHHHH---HHHHHHhhh
Q 038117 217 DITPWTTYHSVVSKDFRDTSEECFQTIKKSWSEIDNIASKPDGLAILSKKFKTCTPLKNT--TELKDG---LDTVYSEAA 291 (500)
Q Consensus 217 ~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~F~~c~~l~~~--~~~~~~---l~~~~~~~~ 291 (500)
|| ++|+++|+++++..+++|+++|++++++|++++.+++++++|+++|++|.+++.. .|+..+ +...+..++
T Consensus 153 df---~~y~~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~~~~~l~~~f~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 229 (434)
T PF05577_consen 153 DF---WEYFEVVTESLRKYGPNCYDAIRAAFDQIDKLLKTGNGRQQLKKKFKLCFPLDDKNDDDFAYFFSSIADAFQGMV 229 (434)
T ss_dssp TT---THHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHCCTCHHHHHHHHHCTBSS---TCHCHHHHHHHHHHHHHHHHHT
T ss_pred cc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhcccHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHH
Confidence 77 9999999999987777899999999999999999888899999999999888753 344443 445677789
Q ss_pred hcCCC-------CCCcHHHhchhhhCCCCCCChHH---HHHHHHHhhcc--ccc-ccC-CCCccccCCCCCC----CCCC
Q 038117 292 QYDTP-------SNIPVKRICNAIENAPNCGDDIL---CKIAAGVVEAD--SLE-YDG-NNSRCYINEDRTG----DESD 353 (500)
Q Consensus 292 q~~~~-------~~~~i~~~C~~l~~~~~~~~~~l---~~l~~~~~~~~--~~~-~~g-~~~~C~~~~~~~~----~~~~ 353 (500)
||+++ +.+++..+|+.|++.. ..+.+ ..+...+.+.. ... ... ....|........ ..++
T Consensus 230 qy~~~~~~~~~~~~~~i~~~C~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (434)
T PF05577_consen 230 QYPYPGNFNSPLPAWPIRQLCDSLTNAS--WPDEVLRLAALAQWYNNFNTTCYSNSCADFDYNCFDSTYDDSSFDDNADD 307 (434)
T ss_dssp --SS-EESSSEE-SSHHHHHHHHCHTSS--SHHHHHHHHHHHHHHCCCH-SCCHHCCC--SS-BSSTT---SS----HHH
T ss_pred hcCCCcccccCCCCcchHHHhhhhcccc--cCchhHHHHHHHHHHHHhcCccccccccccccccccCCCCcccccccccc
Confidence 99776 3468999999999653 11221 22222111100 000 000 0112333211111 2357
Q ss_pred CcceeeeeccccccccCC-CCCCCCCCCCChhhHHHHhhhhcCCCC-------Ccccccccccc-ccchhcccCCccEEE
Q 038117 354 EGWEWQSCSEMVVPMGKD-KNSMYQPEPWNLTKYIKNCKEQYGVSP-------RPSWVLTYYGG-HDIKLILRRSTSNII 424 (500)
Q Consensus 354 R~W~yQtCtE~g~~~t~~-~~~~f~~~~~~~~~~~~~C~~~FG~~~-------~~~~~n~~yGG-~~~~~~~~~~~snii 424 (500)
|+|.||+||||||||+++ ..++| ++.++++++.++|+++||..+ .++++|.+||| +++. ++||+
T Consensus 308 R~W~wQtCtE~G~fqt~~~~~~l~-~~~~~l~~~~~~C~~~Fg~~~~~~~i~~~~~~tN~~YGG~~~~~------~tnvi 380 (434)
T PF05577_consen 308 RQWLWQTCTEFGYFQTADGPNSLF-SRLVNLDYYQDQCQDVFGPGPNPESIPPNVDWTNNYYGGWWNPN------ATNVI 380 (434)
T ss_dssp HHHHHHHCCT-B----B-SSSSSS--B---HHHHHHHHHHHHS----T------TCHHHHHHTTT--TT--------SEE
T ss_pred hhhHHHhhhhccceeccCCCCCcc-cCCCCHHHHHHHHHHHhCCCccccccccchhHHhheeCccccCC------CCeEE
Confidence 999999999999999988 56788 589999999999999998643 45789999999 7876 89999
Q ss_pred EEcCCCCccCCCCccccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHH
Q 038117 425 FSNGMRDPFSRGGWVKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTE 480 (500)
Q Consensus 425 FtnG~~DPW~~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~ 480 (500)
||||++||||.+|+..+.+ .++++++||||+||.||+++++.||++|++||++|
T Consensus 381 FtNG~~DPW~~lgv~~~~~--~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~aR~~i 434 (434)
T PF05577_consen 381 FTNGELDPWRALGVTSDSS--DSVPAIVIPGGAHCSDLYPPNPNDPPELKAARQRI 434 (434)
T ss_dssp EEEETT-CCGGGS--S-SS--SSEEEEEETT--TTGGGS---TT--HHHHHHHHH-
T ss_pred eeCCCCCCcccccCCCCCC--CCcccEEECCCeeeccccCCCCCCCHHHHHHHhhC
Confidence 9999999999999988877 78899999999999999999999999999999986
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=9.9e-103 Score=798.30 Aligned_cols=419 Identities=28% Similarity=0.494 Sum_probs=356.0
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCccc--ccchHHHhHHhcCceEEEE
Q 038117 48 NHGFETFFYNQTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQ--LSGFTYENAHQFKALIVIL 125 (500)
Q Consensus 48 ~~~~~~~~f~Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~--~~g~~~~~A~~~gA~~v~l 125 (500)
....+..||+|++|||+ . +.+.|.||||++.++|.+++|||||+|||||++...+. ..+.+.++|+++||.|+.|
T Consensus 48 ~~~~~~~~~~Q~lDhF~--~-~~~~~~Qq~~y~n~~~~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~l 124 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFD--S-SNGKFFQQRFYNNNQWAKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQL 124 (514)
T ss_pred cccccccchhhhhhhhh--c-chhhhhhhheeeccccccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEe
Confidence 56788999999999996 2 45677777777777776999999999999999986663 3467889999999999999
Q ss_pred eeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCC-CCEEEeccChhhHHHHHHHHhCCCeEEE
Q 038117 126 EHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATH-APVIAIGASYGGELATWFRLKYPHVVIG 204 (500)
Q Consensus 126 EHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~-~pwI~~GGSY~G~LAaw~R~kYP~~v~g 204 (500)
||||||+|+|++++ +++||||||++|||+|+|+||+.++.+++..+ .|||+|||||+|+||||||+||||++.|
T Consensus 125 EHRFYG~S~P~~~~-----st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~G 199 (514)
T KOG2182|consen 125 EHRFYGQSSPIGDL-----STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVG 199 (514)
T ss_pred eeeccccCCCCCCC-----cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhee
Confidence 99999999999976 57899999999999999999999999987644 5999999999999999999999999999
Q ss_pred EEecccccccccCCCCcchhhHHHHHhhhcCChHHHHHHHHHHHHHHhhhcCcchHHHHHHhcccCCCCCC------hhh
Q 038117 205 SLASSAPILYYGDITPWTTYHSVVSKDFRDTSEECFQTIKKSWSEIDNIASKPDGLAILSKKFKTCTPLKN------TTE 278 (500)
Q Consensus 205 avASSApv~a~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~F~~c~~l~~------~~~ 278 (500)
||||||||+++.|| ++|.++|+++++..+++|.++|+.++..|++++.+.+++++|++.|++|.++++ ...
T Consensus 200 svASSapv~A~~DF---~EY~~VVe~s~~~~~~~C~~ai~~~f~~~~~l~~t~~gr~~Lk~~Fnl~~~f~~~~s~~d~~~ 276 (514)
T KOG2182|consen 200 SVASSAPVLAKVDF---YEYLMVVEESLRRYSPECADAIKEGFKSMEELLLTKGGRQALKSLFNLCPPFDNNVSDTDQHN 276 (514)
T ss_pred ecccccceeEEecH---HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccCCccccchhHHHHHH
Confidence 99999999999887 999999999999899999999999999999999988899999999999998832 112
Q ss_pred HHHHHHHHHHhhhhcCCCC------CCcHHHhchhhhCCCCCCChHHHHHHHHHhhcccccccCCCCccccCCC------
Q 038117 279 LKDGLDTVYSEAAQYDTPS------NIPVKRICNAIENAPNCGDDILCKIAAGVVEADSLEYDGNNSRCYINED------ 346 (500)
Q Consensus 279 ~~~~l~~~~~~~~q~~~~~------~~~i~~~C~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~g~~~~C~~~~~------ 346 (500)
|+.-+...|++++||+.+. .+.+.++|+.|.+. ...+.+.++-+.+.. + ..+....|.+..+
T Consensus 277 ff~nv~~~FqgvvQY~gd~~~~~~~~~~i~~~C~~l~n~--t~~d~v~~~~~~~~~---~-~~~~~~~c~~~~Y~~~i~~ 350 (514)
T KOG2182|consen 277 FFSNVYSNFQGVVQYSGDNSNATASGLGIPAMCDILNNK--TPGDDVVAVNKYMNW---F-NNGFGYGCLDNTYNGMISY 350 (514)
T ss_pred HHHHHHHhhhhheeecCCCCcccccccChhHHHHHhhcC--CCCchHHHHHHHHHH---H-HhccCCCcCCccHHHHHHH
Confidence 3344667788899999886 46799999999873 233445555544432 0 1111146777632
Q ss_pred ---C---C-CCCCCCcceeeeeccccccccCC-CCCCCCCCCCChhhHHHHhhhhcCC-------CCCcccccccccc-c
Q 038117 347 ---R---T-GDESDEGWEWQSCSEMVVPMGKD-KNSMYQPEPWNLTKYIKNCKEQYGV-------SPRPSWVLTYYGG-H 410 (500)
Q Consensus 347 ---~---~-~~~~~R~W~yQtCtE~g~~~t~~-~~~~f~~~~~~~~~~~~~C~~~FG~-------~~~~~~~n~~yGG-~ 410 (500)
+ . ...++|+|.|||||||||+|+++ .+++|+ ..++++||.++|+++||. .+.++.+|.+||| .
T Consensus 351 ~~n~~~~~~~~~a~r~W~wQtCtEfG~yQttds~~~iFg-s~vp~~~fid~C~dlFG~~y~~~~i~~~V~~TN~~YGG~~ 429 (514)
T KOG2182|consen 351 LKNSTEPGEDAAADRLWTWQTCTEFGYYQTTDSGNSIFG-STVPLDYFIDLCMDLFGAEYTAKGIDPNVDQTNYKYGGRD 429 (514)
T ss_pred hhcccCcCcccccchhhhhhhcccceeeEecCCCCcccc-CCCChHHHHHHHHHHhCchhhhhHHHHHHHHhhhhcCccc
Confidence 1 1 23468999999999999999988 678996 689999999999999993 3567789999999 5
Q ss_pred cchhcccCCccEEEEEcCCCCccCCCCccccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 411 DIKLILRRSTSNIIFSNGMRDPFSRGGWVKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 411 ~~~~~~~~~~sniiFtnG~~DPW~~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
+.+ ++||+|+||+.||||++|...+.+ .++..++|.|++||+||+++.+.|+++|+.+|..|.+.|++||+.
T Consensus 430 ~~~------atnVvf~NG~~DPWh~LG~~~st~--~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~ 501 (514)
T KOG2182|consen 430 NYN------ATNVVFPNGSLDPWHALGLQNSTD--SSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQ 501 (514)
T ss_pred ccC------cceEEecCCCCCchhhhccccCCC--CCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhh
Confidence 554 899999999999999999887555 678899999999999999999999999999999999999999986
Q ss_pred HH
Q 038117 491 YY 492 (500)
Q Consensus 491 ~~ 492 (500)
..
T Consensus 502 ~~ 503 (514)
T KOG2182|consen 502 QP 503 (514)
T ss_pred cc
Confidence 54
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=100.00 E-value=2.2e-58 Score=463.47 Aligned_cols=395 Identities=21% Similarity=0.264 Sum_probs=290.7
Q ss_pred cCCCCCCCccccCCc-ccccccCCCCCCceeeEEEeecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCC
Q 038117 24 ANGLKLRPRLGRIRR-SRILEQKDSNHGFETFFYNQTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPID 102 (500)
Q Consensus 24 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~ 102 (500)
+...||++||.+||| +++.|++..+..+...+|+|||||.+ | +.+||+||..+.++ +..+|++|++.|.+-..
T Consensus 3 p~~~DI~~rL~aIpG~s~iee~p~~gyRffvl~y~QPvDH~~--P-~~gtF~QRvtLlHk---~~drPtV~~T~GY~~~~ 76 (448)
T PF05576_consen 3 PAAQDIKDRLLAIPGMSLIEEKPYDGYRFFVLRYTQPVDHRH--P-EKGTFQQRVTLLHK---DFDRPTVLYTEGYNVST 76 (448)
T ss_pred CccHhHHHHHhcCCCceeeeccCCCceEEEEEeeecCCCCCC--C-CCCceEEEEEEEEc---CCCCCeEEEecCccccc
Confidence 344689999999999 55888888888999999999999999 5 67999999999998 66799999999998643
Q ss_pred CcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEe
Q 038117 103 DNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAI 182 (500)
Q Consensus 103 ~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~ 182 (500)
. ....|+++.++|++|++||||||+|+|-+ .+|+|||++||.+|.++.++.+|+.|. .+||.+
T Consensus 77 ~-----p~r~Ept~Lld~NQl~vEhRfF~~SrP~p---------~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWIST 139 (448)
T PF05576_consen 77 S-----PRRSEPTQLLDGNQLSVEHRFFGPSRPEP---------ADWSYLTIWQAASDQHRIVQAFKPIYP---GKWIST 139 (448)
T ss_pred C-----ccccchhHhhccceEEEEEeeccCCCCCC---------CCcccccHhHhhHHHHHHHHHHHhhcc---CCceec
Confidence 2 34569999999999999999999999966 799999999999999999999999997 689999
Q ss_pred ccChhhHHHHHHHHhCCCeEEEEEecccccccccCCC-CcchhhHHHHHhhhcCChHHHHHHHHHHHHHHhhhcCcchH-
Q 038117 183 GASYGGELATWFRLKYPHVVIGSLASSAPILYYGDIT-PWTTYHSVVSKDFRDTSEECFQTIKKSWSEIDNIASKPDGL- 260 (500)
Q Consensus 183 GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~~~~~-~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~- 260 (500)
|||.|||.|.++|.+||+.|+|+||++||+......+ .|..|++.|+ .++|+++|++.+.++ |.++.+-.
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~~~~eD~~y~~Fl~~VG------t~eCR~~l~~~Qre~--L~RR~~l~~ 211 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDVVNREDSRYDRFLEKVG------TAECRDKLNDFQREA--LKRRDELLP 211 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecccccCcccchhHHHHHHhcC------CHHHHHHHHHHHHHH--HhhHHHHHH
Confidence 9999999999999999999999999999986532222 2445666554 589999999999988 54432211
Q ss_pred ------HHHHHhcccCCCCCChhhHHHH-HHHHHHhhhhcCCCCCCcHHHhchhhhCCC-CCCChHHHHHHHHHhhcccc
Q 038117 261 ------AILSKKFKTCTPLKNTTELKDG-LDTVYSEAAQYDTPSNIPVKRICNAIENAP-NCGDDILCKIAAGVVEADSL 332 (500)
Q Consensus 261 ------~~l~~~F~~c~~l~~~~~~~~~-l~~~~~~~~q~~~~~~~~i~~~C~~l~~~~-~~~~~~l~~l~~~~~~~~~~ 332 (500)
++-+-.|++-++++.. +... |...| .+|||+.+ ..|+.|+... +.+++ .|++.+..
T Consensus 212 ~~~~yAa~~g~TF~~vG~~dra--~E~~VLe~~f-aFWQy~~~------~~C~~IP~~~~~Asdd---eL~~~l~~---- 275 (448)
T PF05576_consen 212 RYEAYAAENGLTFRTVGSLDRA--YEYAVLEYPF-AFWQYGTP------ADCASIPADAKTASDD---ELFDFLDA---- 275 (448)
T ss_pred HHHHHHHHcCCEEeecCcHHHH--HHHHHhhhhh-HhhccCCc------cchhcCCCCcCCCCHH---HHHHHHHh----
Confidence 1123366655455443 3333 44445 59999874 6899998532 23333 46665543
Q ss_pred cccCCCCccccCCCCCC-CCCCCcceeeeeccccccccCCCCCCCCCCCCChhhHHHHhhhhcCCCCCccccccccc---
Q 038117 333 EYDGNNSRCYINEDRTG-DESDEGWEWQSCSEMVVPMGKDKNSMYQPEPWNLTKYIKNCKEQYGVSPRPSWVLTYYG--- 408 (500)
Q Consensus 333 ~~~g~~~~C~~~~~~~~-~~~~R~W~yQtCtE~g~~~t~~~~~~f~~~~~~~~~~~~~C~~~FG~~~~~~~~n~~yG--- 408 (500)
..| ++. .++. .....+++||.-||+||+.-.. +.+.. ..+...+. =...| + |..+..+|-
T Consensus 276 -isg-----~s~-ysDq~l~~y~pyyyQA~teLG~p~~~~-~hl~~-~ll~~g~~---~~r~f-v---P~~i~m~Fdp~a 339 (448)
T PF05576_consen 276 -ISG-----FSF-YSDQGLEPYTPYYYQAGTELGYPGYDT-PHLRK-KLLRYGYQ---PPRNF-V---PRDIPMKFDPTA 339 (448)
T ss_pred -hcC-----ccc-cccCCcccccChHHHHHhhcCCCCCCC-cchhc-cccccCCC---CcccC-C---CCCCCCCcCHHH
Confidence 222 111 1222 3356899999999999975432 11100 00110000 01112 0 011111121
Q ss_pred cccchhcccCCccEEEEEcCCCCccCCCCccccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHH
Q 038117 409 GHDIKLILRRSTSNIIFSNGMRDPFSRGGWVKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWI 488 (500)
Q Consensus 409 G~~~~~~~~~~~sniiFtnG~~DPW~~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl 488 (500)
=.+|..|++..++|+||++|++|||++.++....+ +.++.+++.|||+|++++....+ +.|.++++.|++|.
T Consensus 340 m~dI~~Wvr~~~~rmlFVYG~nDPW~A~~f~l~~g-~~ds~v~~~PggnHga~I~~L~~-------~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 340 MRDIDRWVRNNGPRMLFVYGENDPWSAEPFRLGKG-KRDSYVFTAPGGNHGARIAGLPE-------AERAEATARLRRWA 411 (448)
T ss_pred HHHHHHHHHhCCCeEEEEeCCCCCcccCccccCCC-CcceEEEEcCCCcccccccCCCH-------HHHHHHHHHHHHHc
Confidence 12556788889999999999999999999876543 26788999999999999987655 78999999999998
Q ss_pred H
Q 038117 489 T 489 (500)
Q Consensus 489 ~ 489 (500)
+
T Consensus 412 G 412 (448)
T PF05576_consen 412 G 412 (448)
T ss_pred C
Confidence 6
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.26 E-value=7.3e-06 Score=83.78 Aligned_cols=84 Identities=18% Similarity=0.179 Sum_probs=69.0
Q ss_pred cCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 118 FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 118 ~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
.|-.|+++.+|-||.|.+.. .. .-+.++.+.|+..+++.++......+.|++++|.|.||++|.++..+
T Consensus 86 ~Gy~V~~~D~rGhG~S~~~~----------~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 86 MGFACFALDLEGHGRSEGLR----------AY-VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLA 154 (330)
T ss_pred CCCEEEEecCCCCCCCCCcc----------cc-CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhc
Confidence 47899999999999995321 11 24678889999999999986543445689999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 038117 198 YPHVVIGSLASSAPI 212 (500)
Q Consensus 198 YP~~v~gavASSApv 212 (500)
+|+.|.|.|..+++.
T Consensus 155 ~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 155 NPEGFDGAVLVAPMC 169 (330)
T ss_pred CcccceeEEEecccc
Confidence 999999999887665
No 6
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.22 E-value=7.9e-06 Score=79.77 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
+.||+++-|+-+.....+ ..+..+.++.|-.+|.+++|-+|.|..... .-++.+.++..+|+..+++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYL---ENLRELLKEEGREVIMYDQLGCGYSDQPDD---------SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CCeEEEEcCCCCccHHHH---HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------ccccccHHHHHHHHHHHHHH
Confidence 457888888654432211 224455566689999999999999875321 11257889888998877765
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAP 211 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSAp 211 (500)
++. .+++++|.|+||.+|.++-.++|+.+.+.+..++.
T Consensus 93 ~~~------~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 93 LGL------DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred cCC------CcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 431 36999999999999999999999999888766643
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.20 E-value=1.6e-05 Score=82.11 Aligned_cols=86 Identities=21% Similarity=0.211 Sum_probs=67.0
Q ss_pred HhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccC-CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHH
Q 038117 113 ENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGY-FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELA 191 (500)
Q Consensus 113 ~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~y-Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LA 191 (500)
.+++ .|-.+|++++|-||.|.... .| .+.++.+.|+..+++.++......+.|++++|.|+||++|
T Consensus 110 ~l~~-~g~~v~~~D~~G~G~S~~~~------------~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~va 176 (349)
T PLN02385 110 KIAS-SGYGVFAMDYPGFGLSEGLH------------GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVA 176 (349)
T ss_pred HHHh-CCCEEEEecCCCCCCCCCCC------------CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHH
Confidence 3443 37899999999999985311 12 3677888999989888875433344689999999999999
Q ss_pred HHHHHhCCCeEEEEEecccc
Q 038117 192 TWFRLKYPHVVIGSLASSAP 211 (500)
Q Consensus 192 aw~R~kYP~~v~gavASSAp 211 (500)
..+..+||+.+.|.+..++.
T Consensus 177 l~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 177 LKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHhCcchhhheeEeccc
Confidence 99999999999988877643
No 8
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.11 E-value=1.3e-05 Score=76.86 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCcEEEEeCCCCC-CCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAP-IDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 88 ggPIfl~~gGE~~-~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
..|+++++=|-+. .+......+ +..+|++.|..+|+.++|.+|.+...-++ ........ ......|+..+++
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~i~ 84 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW----FFTHHRAR--GTGEVESLHQLID 84 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC----CCccccCC--CCccHHHHHHHHH
Confidence 4676666655442 222111112 56788999999999999988755431110 00000000 1245678888999
Q ss_pred HHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 167 HIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
.+++++..+..+++++|.|.||++|..+..+||+.+.|+++-|++..
T Consensus 85 ~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 85 AVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 99888776667999999999999999999999999999988888764
No 9
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.10 E-value=1.5e-05 Score=80.77 Aligned_cols=104 Identities=20% Similarity=0.219 Sum_probs=73.2
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
+.||+|.-|+.+..... .+.......+-.||++++|-||.|.+-.. ..-.+.++..+|+..+++.
T Consensus 27 ~~~lvllHG~~~~~~~~-----~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------~~~~~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-----GCRRFFDPETYRIVLFDQRGCGKSTPHAC----------LEENTTWDLVADIEKLREK 91 (306)
T ss_pred CCEEEEECCCCCCCCCH-----HHHhccCccCCEEEEECCCCCCCCCCCCC----------cccCCHHHHHHHHHHHHHH
Confidence 56799988987654321 11111222357899999999999975321 1114677888888877765
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++. .+++++|+||||+++..+..+||+.+.+.|..++.+
T Consensus 92 l~~------~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 LGI------KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cCC------CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 531 479999999999999999999999888776655443
No 10
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.09 E-value=1.6e-05 Score=74.19 Aligned_cols=102 Identities=21% Similarity=0.220 Sum_probs=76.7
Q ss_pred EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhh
Q 038117 91 ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKD 170 (500)
Q Consensus 91 Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~ 170 (500)
|+|.-|.-++...+ ..++..++ -|-.+|+++.|-+|.|.+.. .....+.++.++|+..+++.+..
T Consensus 1 vv~~hG~~~~~~~~---~~~~~~l~--~~~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESW---DPLAEALA--RGYRVIAFDLPGHGRSDPPP----------DYSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGG---HHHHHHHH--TTSEEEEEECTTSTTSSSHS----------SGSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHH---HHHHHHHh--CCCEEEEEecCCcccccccc----------ccCCcchhhhhhhhhhccccccc
Confidence 45555554443221 13444554 38899999999999997633 13346788899999999887664
Q ss_pred hcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 171 KYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 171 ~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
.|++++|.|+||+++..+-.+||+.+.+.+.-+++..
T Consensus 66 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 ------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ------ccccccccccccccccccccccccccccceeeccccc
Confidence 5899999999999999999999999999988887764
No 11
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.05 E-value=1.3e-05 Score=76.31 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=74.7
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
+.|+++++.|=+.....+ ..+...+++ |-.++.+++|-+|.|.+.. ...+.++-.+|+..+++.
T Consensus 12 ~~~~li~~hg~~~~~~~~--~~~~~~l~~--~~~v~~~d~~G~G~s~~~~------------~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW--DPVLPALTP--DFRVLRYDKRGHGLSDAPE------------GPYSIEDLADDVLALLDH 75 (251)
T ss_pred CCCeEEEEcCcccchhhH--HHHHHHhhc--ccEEEEecCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHH
Confidence 678877877754332221 122333332 6799999999999984321 135788888888888876
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++. .+++++|.|+||+++..+..++|+.+.+.+..+++.
T Consensus 76 ~~~------~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 76 LGI------ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred hCC------CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 642 479999999999999999999999998888776554
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=97.97 E-value=7.7e-05 Score=73.88 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=73.8
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHI 168 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~ 168 (500)
.||+|++=|-+.-...+. .+...+++ .|-.++++.+|-||.|.+.. ...-+...-+.|+..++..+
T Consensus 25 ~~~v~llHG~~~~~~~~~--~~~~~l~~-~g~~via~D~~G~G~S~~~~-----------~~~~~~~~~~~d~~~~l~~~ 90 (276)
T PHA02857 25 KALVFISHGAGEHSGRYE--ELAENISS-LGILVFSHDHIGHGRSNGEK-----------MMIDDFGVYVRDVVQHVVTI 90 (276)
T ss_pred CEEEEEeCCCccccchHH--HHHHHHHh-CCCEEEEccCCCCCCCCCcc-----------CCcCCHHHHHHHHHHHHHHH
Confidence 467777555432221111 12222333 27889999999999996522 01124455678887777777
Q ss_pred hhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 169 KDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 169 k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+..+. ..|++++|.|.||++|..+..++|+.+.+.+..++++
T Consensus 91 ~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 91 KSTYP--GVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred HhhCC--CCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 65443 4689999999999999999999999999988887654
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=97.95 E-value=0.00012 Score=75.21 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=76.6
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHH---hcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAH---QFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~---~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
++|++|++.|=+.- .+.+.++|+ +.|-.++++.+|-+|.|.+..+ ....-...+.+.-++|+..+
T Consensus 53 ~~~~vll~HG~~~~------~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~d~~~~ 120 (330)
T PRK10749 53 HDRVVVICPGRIES------YVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLD------DPHRGHVERFNDYVDDLAAF 120 (330)
T ss_pred CCcEEEEECCccch------HHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCC------CCCcCccccHHHHHHHHHHH
Confidence 34566666664221 122333332 4588999999999999964221 00111124788999999999
Q ss_pred HHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccc
Q 038117 165 LLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAP 211 (500)
Q Consensus 165 i~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSAp 211 (500)
++.+.+.+ +..|++++|.|+||++|.-+..++|+.+.+.+..+.+
T Consensus 121 ~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 121 WQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 98875443 2368999999999999999999999999998877644
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.94 E-value=0.0001 Score=74.36 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=75.8
Q ss_pred CceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhcccccccc
Q 038117 71 QTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRG 150 (500)
Q Consensus 71 ~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~ 150 (500)
++.+..|... ..+.+|.++++-|-+.-...+ ..++..+++ .|-.+|++.+|-||+|.+.+. + .
T Consensus 32 ~~~~i~y~~~----G~~~~~~lvliHG~~~~~~~w--~~~~~~L~~-~gy~vi~~Dl~G~G~S~~~~~---------~-~ 94 (302)
T PRK00870 32 GPLRMHYVDE----GPADGPPVLLLHGEPSWSYLY--RKMIPILAA-AGHRVIAPDLIGFGRSDKPTR---------R-E 94 (302)
T ss_pred ceEEEEEEec----CCCCCCEEEEECCCCCchhhH--HHHHHHHHh-CCCEEEEECCCCCCCCCCCCC---------c-c
Confidence 4566555542 133456555555532211111 112222332 267899999999999976331 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 151 YFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 151 yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
-.+.+...+|++.+++++. ..|++++|+|+||++|..+..+||+.+.+.+--++
T Consensus 95 ~~~~~~~a~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 95 DYTYARHVEWMRSWFEQLD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred cCCHHHHHHHHHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 2466777788887776543 14799999999999999999999999998876554
No 15
>PRK10566 esterase; Provisional
Probab=97.90 E-value=0.00013 Score=71.13 Aligned_cols=107 Identities=18% Similarity=0.129 Sum_probs=68.6
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccC--CCHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGY--FNSAQALADYASIL 165 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~y--Lt~~QALaD~a~fi 165 (500)
..|+++++-|-+.....+ ..+...+++ .|-.++++++|.+|.|.+ ++ ....+.. =...++++|++.++
T Consensus 26 ~~p~vv~~HG~~~~~~~~--~~~~~~l~~-~G~~v~~~d~~g~G~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVY--SYFAVALAQ-AGFRVIMPDAPMHGARFS-GD------EARRLNHFWQILLQNMQEFPTLR 95 (249)
T ss_pred CCCEEEEeCCCCcccchH--HHHHHHHHh-CCCEEEEecCCcccccCC-Cc------cccchhhHHHHHHHHHHHHHHHH
Confidence 357777777743221111 112223343 478899999999998743 21 0112211 11346778888888
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEE
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIG 204 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~g 204 (500)
.++++....+..+++++|.|+||.+|.++..++|++..+
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~ 134 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCV 134 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEE
Confidence 887765333456899999999999999999999987544
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.87 E-value=6.4e-05 Score=73.73 Aligned_cols=104 Identities=17% Similarity=0.098 Sum_probs=72.1
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
++|.++++.|=+.....+ ..++..+++ +..++.+.+|-+|.|.+-. . .-.|.+...+|++.+++.
T Consensus 27 ~~~~vv~~hG~~~~~~~~--~~~~~~l~~--~~~vi~~D~~G~G~S~~~~---------~--~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSW--RDLMPPLAR--SFRVVAPDLPGHGFTRAPF---------R--FRFTLPSMAEDLSALCAA 91 (278)
T ss_pred CCCeEEEEcCCCCCHHHH--HHHHHHHhh--CcEEEeecCCCCCCCCCcc---------c--cCCCHHHHHHHHHHHHHH
Confidence 356666666633221111 123445555 4789999999999997532 1 124778888888888765
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+. ..|++++|.|+||+++..+..++|+.+.+.+.-+++.
T Consensus 92 ~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 42 1478999999999999999999999888777666544
No 17
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.86 E-value=0.00011 Score=69.54 Aligned_cols=78 Identities=23% Similarity=0.345 Sum_probs=59.4
Q ss_pred cCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHH-HHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 118 FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALAD-YASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 118 ~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD-~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
-|..++.+++|.+|.|... ......+.++++.| +..+++.+. ..|++++|.|+||++|..+-.
T Consensus 26 ~~~~v~~~d~~g~G~s~~~----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~ia~~~a~ 89 (251)
T TIGR03695 26 PHFRCLAIDLPGHGSSQSP----------DEIERYDFEEAAQDILATLLDQLG------IEPFFLVGYSMGGRIALYYAL 89 (251)
T ss_pred ccCeEEEEcCCCCCCCCCC----------CccChhhHHHHHHHHHHHHHHHcC------CCeEEEEEeccHHHHHHHHHH
Confidence 3789999999999998431 12234677777777 555554432 258999999999999999999
Q ss_pred hCCCeEEEEEecccc
Q 038117 197 KYPHVVIGSLASSAP 211 (500)
Q Consensus 197 kYP~~v~gavASSAp 211 (500)
++|+.+.+.+.-+++
T Consensus 90 ~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 90 QYPERVQGLILESGS 104 (251)
T ss_pred hCchheeeeEEecCC
Confidence 999999888775543
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.81 E-value=6.4e-05 Score=72.27 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=70.2
Q ss_pred CCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
+++|+++++-|=+.-...+. ..+..+++ +..++++++|-+|.|..-.. .-.+.++..+|++.+++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~--~~~~~l~~--~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWA--PQLDVLTQ--RFHVVTYDHRGTGRSPGELP-----------PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CCCCEEEEEcCCCcchhHHH--HHHHHHHh--ccEEEEEcCCCCCCCCCCCc-----------ccCCHHHHHHHHHHHHH
Confidence 44665565554332211111 12223333 68999999999999964210 12578999999999987
Q ss_pred HHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 167 HIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
.++. .|++++|.|+||++|..+..++|+.+.+.+.-+
T Consensus 76 ~~~~------~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~ 112 (257)
T TIGR03611 76 ALNI------ERFHFVGHALGGLIGLQLALRYPERLLSLVLIN 112 (257)
T ss_pred HhCC------CcEEEEEechhHHHHHHHHHHChHHhHHheeec
Confidence 6642 479999999999999999999999877766544
No 19
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.79 E-value=0.00012 Score=71.23 Aligned_cols=97 Identities=21% Similarity=0.170 Sum_probs=70.7
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
+.||||.-|.-++...+ ..+...+++. -.+|.++.|.+|+|.+.. . +|.++-.+|+..++..
T Consensus 16 ~~~iv~lhG~~~~~~~~---~~~~~~l~~~--~~vi~~D~~G~G~s~~~~----------~---~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL---GVLARDLVND--HDIIQVDMRNHGLSPRDP----------V---MNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCchhHH---HHHHHHHhhC--CeEEEECCCCCCCCCCCC----------C---CCHHHHHHHHHHHHHH
Confidence 34677666655443221 1233445553 599999999999997632 1 5788888899988886
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEec
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLAS 208 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavAS 208 (500)
+.. .+++++|.|.||++|.-+..++|+.|.+.+.-
T Consensus 78 l~~------~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli 112 (255)
T PRK10673 78 LQI------EKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112 (255)
T ss_pred cCC------CceEEEEECHHHHHHHHHHHhCHhhcceEEEE
Confidence 532 46999999999999999999999998886654
No 20
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.72 E-value=0.0003 Score=70.52 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=69.3
Q ss_pred hHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhH
Q 038117 110 FTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGE 189 (500)
Q Consensus 110 ~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~ 189 (500)
.+..+++. +.+|++..|-||.|.+.... ..+.-...+.++-..|++.|++.+.. .|++++|.|.||+
T Consensus 48 ~~~~L~~~--~~vi~~DlpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~ 114 (294)
T PLN02824 48 NTPVLAKS--HRVYAIDLLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSDVVG------DPAFVICNSVGGV 114 (294)
T ss_pred HHHHHHhC--CeEEEEcCCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHHhcC------CCeEEEEeCHHHH
Confidence 34456665 49999999999999753310 01112457888888999999886642 4899999999999
Q ss_pred HHHHHHHhCCCeEEEEEeccccc
Q 038117 190 LATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 190 LAaw~R~kYP~~v~gavASSApv 212 (500)
++.-+..+||+.+.+.+.-+++.
T Consensus 115 va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 115 VGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHhChhheeEEEEECCCc
Confidence 99999999999999988776554
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.71 E-value=0.00015 Score=72.05 Aligned_cols=113 Identities=20% Similarity=0.227 Sum_probs=76.9
Q ss_pred eeEEEEeccccCCCC-CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCC
Q 038117 74 PQRYVINSKFWGGGN-SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYF 152 (500)
Q Consensus 74 ~QRY~~n~~~~~~~g-gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yL 152 (500)
+.+|++... +++ .||+|.-|--++... + ..++..+++ +-.+|++.+|-||+|..-. . -.
T Consensus 13 ~~~~~~~~~---~~~~~plvllHG~~~~~~~-w--~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~---------~---~~ 72 (276)
T TIGR02240 13 SIRTAVRPG---KEGLTPLLIFNGIGANLEL-V--FPFIEALDP--DLEVIAFDVPGVGGSSTPR---------H---PY 72 (276)
T ss_pred EEEEEEecC---CCCCCcEEEEeCCCcchHH-H--HHHHHHhcc--CceEEEECCCCCCCCCCCC---------C---cC
Confidence 567766321 334 477777774333221 1 122333443 4699999999999995311 1 14
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 153 NSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 153 t~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+.-.+|+..|+.++.. .|++++|.|+||++|..+..++|+.+.+-+.-+++.
T Consensus 73 ~~~~~~~~~~~~i~~l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 73 RFPGLAKLAARMLDYLDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred cHHHHHHHHHHHHHHhCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 666666777778777642 479999999999999999999999999887776654
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.70 E-value=0.00025 Score=71.14 Aligned_cols=104 Identities=15% Similarity=0.069 Sum_probs=76.0
Q ss_pred CCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 86 GGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
+.+.||+|+-|.-+.... + ..++..+++.+ -+|++..|-||.|.+.. . . .|.+...+|+..++
T Consensus 25 G~g~~vvllHG~~~~~~~-w--~~~~~~L~~~~--~via~D~~G~G~S~~~~---------~--~-~~~~~~a~dl~~ll 87 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYL-W--RNIIPHLAGLG--RCLAPDLIGMGASDKPD---------I--D-YTFADHARYLDAWF 87 (295)
T ss_pred CCCCEEEEECCCCCCHHH-H--HHHHHHHhhCC--EEEEEcCCCCCCCCCCC---------C--C-CCHHHHHHHHHHHH
Confidence 455577777765433221 1 13445566663 99999999999995422 1 2 37777778888888
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+.. .|++++|.|.||.+|.-+-.+||+.+.+.+--++++
T Consensus 88 ~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 88 DALGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHhCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 87642 489999999999999999999999999988777644
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.66 E-value=0.00037 Score=69.62 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=59.2
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
|-.++.+++|-+|.|.+.+ . ...|.++..+|+..+++.+.. ..+++++|+||||+++..+-.+|
T Consensus 45 g~~vi~~dl~g~G~s~~~~---------~--~~~~~~~~~~~l~~~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 45 GYKVTCIDLKSAGIDQSDA---------D--SVTTFDEYNKPLIDFLSSLPE-----NEKVILVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred CCEEEEecccCCCCCCCCc---------c--cCCCHHHHHHHHHHHHHhcCC-----CCCEEEEEECchHHHHHHHHHhC
Confidence 6799999999999885422 1 236777777888777765431 25899999999999999999999
Q ss_pred CCeEEEEEeccc
Q 038117 199 PHVVIGSLASSA 210 (500)
Q Consensus 199 P~~v~gavASSA 210 (500)
|+.+.+.+--++
T Consensus 109 p~~v~~lv~~~~ 120 (273)
T PLN02211 109 PKKICLAVYVAA 120 (273)
T ss_pred hhheeEEEEecc
Confidence 999887766544
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.61 E-value=0.00028 Score=72.72 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=69.7
Q ss_pred CCCcEEEEeCCCCCCCCcc-----cccchHHHhHH---hc---CceEEEEeeeeeecCCCCCCchhhccccccccCCCHH
Q 038117 87 GNSPILAFLGAEAPIDDNI-----QLSGFTYENAH---QF---KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSA 155 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~-----~~~g~~~~~A~---~~---gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~ 155 (500)
.+.|++|+.||-+...... ...+++..... .+ +--||++.+|-+|.|.+.+ .+++
T Consensus 56 ~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~--------------~~~~ 121 (343)
T PRK08775 56 AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVP--------------IDTA 121 (343)
T ss_pred CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCC--------------CCHH
Confidence 3569999999877644200 00122222221 22 4679999999999874311 2445
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
.-..|++.|++.+.- +.+++++|.|+||++|..+..+||+.|.+.+--+
T Consensus 122 ~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~ 170 (343)
T PRK08775 122 DQADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVS 170 (343)
T ss_pred HHHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEEC
Confidence 556788888776542 1346899999999999999999999988776544
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.59 E-value=0.00043 Score=66.80 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=58.0
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+-.+++++.|-||.|.+-. . .+.++..+|+..+++.+. ..|++++|.|+||.+|..+..+|
T Consensus 27 ~~~vi~~D~~G~G~S~~~~---------~----~~~~~~~~~l~~~l~~~~------~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAIS---------V----DGFADVSRLLSQTLQSYN------ILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred CCCEEEecCCCCCCCCCcc---------c----cCHHHHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhC
Confidence 5799999999999996522 1 167777888888877542 25899999999999999999999
Q ss_pred CCe-EEEEEecccc
Q 038117 199 PHV-VIGSLASSAP 211 (500)
Q Consensus 199 P~~-v~gavASSAp 211 (500)
|+. +.+.+..+++
T Consensus 88 ~~~~v~~lvl~~~~ 101 (242)
T PRK11126 88 LAGGLCGLIVEGGN 101 (242)
T ss_pred CcccccEEEEeCCC
Confidence 764 8777665544
No 26
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.58 E-value=0.00033 Score=72.07 Aligned_cols=88 Identities=20% Similarity=0.180 Sum_probs=65.8
Q ss_pred hcCceEEEEeeeeeecCCCCCCchhhccccccccC-CCHHHHHHHHHHHHHHHhhhc------------------CCCCC
Q 038117 117 QFKALIVILEHRYYGKSVPFGSRKAALKNARHRGY-FNSAQALADYASILLHIKDKY------------------NATHA 177 (500)
Q Consensus 117 ~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~y-Lt~~QALaD~a~fi~~~k~~~------------------~~~~~ 177 (500)
+-|-.|++++||-.|+|.... ....+ -+.++.++|+..+++.+++.. .+.+.
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~---------~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQ---------NLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred HCCCcEEEecccccCCCcccc---------ccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 348899999999999986322 11222 477888899999999887621 11257
Q ss_pred CEEEeccChhhHHHHHHHHhCCC--------eEEEEEecccccc
Q 038117 178 PVIAIGASYGGELATWFRLKYPH--------VVIGSLASSAPIL 213 (500)
Q Consensus 178 pwI~~GGSY~G~LAaw~R~kYP~--------~v~gavASSApv~ 213 (500)
|+|++|+|.||+++.-+-+++|+ .+.|++.+|+++.
T Consensus 143 p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 143 PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceE
Confidence 99999999999999988777764 5778887777763
No 27
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.57 E-value=0.00019 Score=67.86 Aligned_cols=76 Identities=22% Similarity=0.340 Sum_probs=58.4
Q ss_pred EEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCe
Q 038117 122 IVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHV 201 (500)
Q Consensus 122 ~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~ 201 (500)
||.+-.|-+|.|.|-.. ..+...+.+...+|+..+++.+. . .+++++|+||||+++..+..+||+.
T Consensus 3 vi~~d~rG~g~S~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~----~--~~~~~vG~S~Gg~~~~~~a~~~p~~ 68 (230)
T PF00561_consen 3 VILFDLRGFGYSSPHWD--------PDFPDYTTDDLAADLEALREALG----I--KKINLVGHSMGGMLALEYAAQYPER 68 (230)
T ss_dssp EEEEECTTSTTSSSCCG--------SGSCTHCHHHHHHHHHHHHHHHT----T--SSEEEEEETHHHHHHHHHHHHSGGG
T ss_pred EEEEeCCCCCCCCCCcc--------CCcccccHHHHHHHHHHHHHHhC----C--CCeEEEEECCChHHHHHHHHHCchh
Confidence 78889999999997210 12345666666666666655443 2 3599999999999999999999999
Q ss_pred EEEEEecccc
Q 038117 202 VIGSLASSAP 211 (500)
Q Consensus 202 v~gavASSAp 211 (500)
+.+.+.-+++
T Consensus 69 v~~lvl~~~~ 78 (230)
T PF00561_consen 69 VKKLVLISPP 78 (230)
T ss_dssp EEEEEEESES
T ss_pred hcCcEEEeee
Confidence 9999888876
No 28
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.53 E-value=0.00034 Score=69.20 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=55.9
Q ss_pred cCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 118 FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 118 ~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
-|-.+|++++|-||.|.+... ... .+... ..|+..|++.+.. .+++++|+|+||+++..+..+
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~-------~~~---~~~~~-~~~l~~~l~~l~~------~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 59 AGYRVILKDSPGFNKSDAVVM-------DEQ---RGLVN-ARAVKGLMDALDI------EKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCEEEEECCCCCCCCCCCcC-------ccc---ccchh-HHHHHHHHHHcCC------CCeeEEEECchHHHHHHHHHh
Confidence 378999999999999975321 011 11111 3566666665432 489999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 038117 198 YPHVVIGSLASSAP 211 (500)
Q Consensus 198 YP~~v~gavASSAp 211 (500)
||+.+.+.+.-+++
T Consensus 122 ~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 122 YPDRIGKLILMGPG 135 (282)
T ss_pred ChHhhceEEEECCC
Confidence 99999888766543
No 29
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.53 E-value=0.0014 Score=65.51 Aligned_cols=107 Identities=13% Similarity=-0.048 Sum_probs=75.0
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHh---cCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQ---FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~---~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
.|+++++-|=+.-... ....+..+|+. .|-.++.+.+|-||+|.... . -.+.++.++|+...+
T Consensus 25 ~~~VlllHG~g~~~~~--~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---------~---~~~~~~~~~Dv~~ai 90 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNK--SRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---------A---AARWDVWKEDVAAAY 90 (266)
T ss_pred ceEEEEECCCcccccc--hhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---------c---cCCHHHHHHHHHHHH
Confidence 4667677663321000 01223344444 46799999999999985321 1 135678889999888
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+++.. ..|++++|.|.||.+|..+..++|+.+.+.+..+.++
T Consensus 91 ~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 91 RWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 8887642 3689999999999999999999999998887776443
No 30
>PLN02965 Probable pheophorbidase
Probab=97.51 E-value=0.00071 Score=66.40 Aligned_cols=103 Identities=16% Similarity=0.005 Sum_probs=69.3
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
...|+|.-|.-.+... | ...+..|+ +-+--+|++.+|-+|.|-... . ...|.++-.+|+..+++.
T Consensus 3 ~~~vvllHG~~~~~~~-w--~~~~~~L~-~~~~~via~Dl~G~G~S~~~~---------~--~~~~~~~~a~dl~~~l~~ 67 (255)
T PLN02965 3 EIHFVFVHGASHGAWC-W--YKLATLLD-AAGFKSTCVDLTGAGISLTDS---------N--TVSSSDQYNRPLFALLSD 67 (255)
T ss_pred ceEEEEECCCCCCcCc-H--HHHHHHHh-hCCceEEEecCCcCCCCCCCc---------c--ccCCHHHHHHHHHHHHHh
Confidence 4457777665433221 1 12223333 225689999999999994211 1 246677777888888876
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
+.. ..|++++|.|+||+++..+..+||+.|.+.+--++
T Consensus 68 l~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAA 105 (255)
T ss_pred cCC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEcc
Confidence 431 14899999999999999999999999987764333
No 31
>PLN02511 hydrolase
Probab=97.51 E-value=0.00055 Score=72.05 Aligned_cols=107 Identities=21% Similarity=0.310 Sum_probs=77.3
Q ss_pred CCCcEEEEe-CCCCCCCCcccccchHH---HhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHH
Q 038117 87 GNSPILAFL-GAEAPIDDNIQLSGFTY---ENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYA 162 (500)
Q Consensus 87 ~ggPIfl~~-gGE~~~~~~~~~~g~~~---~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a 162 (500)
.++|+++++ |.+|.... .++. ..+.+.|-.+|++.+|-+|.|..... ++. ...-..|+.
T Consensus 98 ~~~p~vvllHG~~g~s~~-----~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~-----------~~~-~~~~~~Dl~ 160 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDD-----SYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP-----------QFY-SASFTGDLR 160 (388)
T ss_pred CCCCEEEEECCCCCCCCC-----HHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc-----------CEE-cCCchHHHH
Confidence 456755555 55555432 2332 23446688999999999999964321 111 134467999
Q ss_pred HHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCe--EEEEEeccccc
Q 038117 163 SILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHV--VIGSLASSAPI 212 (500)
Q Consensus 163 ~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~--v~gavASSApv 212 (500)
.++++++..+. +.|++++|.|.||++++.+-.++|+. +.|+++=|+|.
T Consensus 161 ~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 161 QVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 99999998764 46999999999999999999999987 78888777776
No 32
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.48 E-value=0.00067 Score=71.29 Aligned_cols=86 Identities=9% Similarity=0.035 Sum_probs=67.5
Q ss_pred HHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHH
Q 038117 111 TYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGEL 190 (500)
Q Consensus 111 ~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~L 190 (500)
+..+++ +..+|++++|-||.|.+-.. ....-.|.++...|+..|++.+.. .+++++|+|+||++
T Consensus 147 ~~~L~~--~~~Via~DlpG~G~S~~p~~--------~~~~~ys~~~~a~~l~~~i~~l~~------~~~~LvG~s~GG~i 210 (383)
T PLN03084 147 LPVLSK--NYHAIAFDWLGFGFSDKPQP--------GYGFNYTLDEYVSSLESLIDELKS------DKVSLVVQGYFSPP 210 (383)
T ss_pred HHHHhc--CCEEEEECCCCCCCCCCCcc--------cccccCCHHHHHHHHHHHHHHhCC------CCceEEEECHHHHH
Confidence 344554 67999999999999865321 111125888888999999887652 37999999999999
Q ss_pred HHHHHHhCCCeEEEEEeccccc
Q 038117 191 ATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 191 Aaw~R~kYP~~v~gavASSApv 212 (500)
+..+..+||+.+.+.+..+++.
T Consensus 211 a~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 211 VVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHhChHhhcEEEEECCCC
Confidence 9999999999999999888764
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.45 E-value=0.0013 Score=69.56 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=65.8
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
++|.++++-|=+.-...+. ..+..+++. -.++++++|-+|.|.... ..+-+.+++.++++.-+..
T Consensus 104 ~~p~vvllHG~~~~~~~~~--~~~~~L~~~--~~vi~~D~rG~G~S~~~~-----------~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFF--RNFDALASR--FRVIAIDQLGWGGSSRPD-----------FTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred CCCEEEEECCCCcchhHHH--HHHHHHHhC--CEEEEECCCCCCCCCCCC-----------cccccHHHHHHHHHHHHHH
Confidence 4565555555332211111 123455654 689999999999985311 1133455655554433332
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
+.+.... .|++++|+|+||.+|..+..+||+.+.+.+..+.
T Consensus 169 ~~~~l~~--~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p 209 (402)
T PLN02894 169 WRKAKNL--SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGP 209 (402)
T ss_pred HHHHcCC--CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECC
Confidence 2222322 4899999999999999999999999998776543
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.45 E-value=0.0014 Score=69.23 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=62.2
Q ss_pred cCceEEEEeeeeeecCCCCCCchhhccccccccC-CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 118 FKALIVILEHRYYGKSVPFGSRKAALKNARHRGY-FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 118 ~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~y-Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
.|-.++++.||-||.|.... .| -+.++..+|+..+++.++..+. +.|++++|.|+||.++..+.
T Consensus 162 ~Gy~V~~~D~rGhG~S~~~~------------~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a- 226 (395)
T PLN02652 162 CGFGVYAMDWIGHGGSDGLH------------GYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAA- 226 (395)
T ss_pred CCCEEEEeCCCCCCCCCCCC------------CCCcCHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHH-
Confidence 37899999999999985311 22 2567889999999999986642 45899999999999998765
Q ss_pred hCCC---eEEEEEeccccc
Q 038117 197 KYPH---VVIGSLASSAPI 212 (500)
Q Consensus 197 kYP~---~v~gavASSApv 212 (500)
.+|+ .+.|.+..|+.+
T Consensus 227 ~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 227 SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred hccCcccccceEEEECccc
Confidence 4775 688888876543
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.43 E-value=0.00045 Score=65.43 Aligned_cols=66 Identities=24% Similarity=0.261 Sum_probs=50.7
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+-.++++++|-+|.|.+.. ..+.++.++|+..++ +.|++++|.|+||+++..+-.+|
T Consensus 30 ~~~vi~~d~~G~G~s~~~~-------------~~~~~~~~~~~~~~~----------~~~~~lvG~S~Gg~~a~~~a~~~ 86 (245)
T TIGR01738 30 HFTLHLVDLPGHGRSRGFG-------------PLSLADAAEAIAAQA----------PDPAIWLGWSLGGLVALHIAATH 86 (245)
T ss_pred CeEEEEecCCcCccCCCCC-------------CcCHHHHHHHHHHhC----------CCCeEEEEEcHHHHHHHHHHHHC
Confidence 5789999999999985422 235555555554321 14899999999999999999999
Q ss_pred CCeEEEEEe
Q 038117 199 PHVVIGSLA 207 (500)
Q Consensus 199 P~~v~gavA 207 (500)
|+.+.+.+.
T Consensus 87 p~~v~~~il 95 (245)
T TIGR01738 87 PDRVRALVT 95 (245)
T ss_pred HHhhheeeE
Confidence 998888764
No 36
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.43 E-value=0.0033 Score=62.82 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=68.8
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEee--eeeecCC-CCCCchh----h-cc--cccccc-CCCHH-
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEH--RYYGKSV-PFGSRKA----A-LK--NARHRG-YFNSA- 155 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEH--RyyG~S~-P~~~~~~----~-~~--s~~nl~-yLt~~- 155 (500)
..|+++++-|-+.....+...+.+..+|.+.|-.||+.+- |-.|.+- + ..++. + +. +...++ -.+.+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~-~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGED-DAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCc-ccccccCCccccccCCcCcccccchHHH
Confidence 4688777777654333232223345788888999999885 4443221 0 00000 0 00 000000 00111
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
..+.|+..+ +++.+.....+++++|.|+||.+|.++-.+||+.+.+.++.|+..
T Consensus 120 ~~~~~l~~~---~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 120 YIVQELPAL---VAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHH---HHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 112233222 344455455689999999999999999999999998888776554
No 37
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.41 E-value=0.00013 Score=69.75 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=68.7
Q ss_pred HHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHH
Q 038117 112 YENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELA 191 (500)
Q Consensus 112 ~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LA 191 (500)
..+-.+.|-.|+.+..|--+ .++.- + .+.++.-.-.+.+.|+...++++.++...+..++.++|+||||.++
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~---g~g~~---~--~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSG---GYGKD---F--HEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSS---SSHHH---H--HHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCC---ccchh---H--HHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 34555679999999999654 22210 0 0223334446789999999999987765556789999999999999
Q ss_pred HHHHHhCCCeEEEEEecccccc
Q 038117 192 TWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 192 aw~R~kYP~~v~gavASSApv~ 213 (500)
+++-..+|+.+.++++.+++..
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SS
T ss_pred chhhcccceeeeeeeccceecc
Confidence 9999999999999998887764
No 38
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.33 E-value=0.0027 Score=63.38 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=78.6
Q ss_pred EEEEeCCCCCCCCcccccchHHHhHHh---cCceEEEEeeeeeecCCCCCCchhhccccccccCC-CHHHHHHHHHHHHH
Q 038117 91 ILAFLGAEAPIDDNIQLSGFTYENAHQ---FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYF-NSAQALADYASILL 166 (500)
Q Consensus 91 Ifl~~gGE~~~~~~~~~~g~~~~~A~~---~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yL-t~~QALaD~a~fi~ 166 (500)
+++++-|.+.-.. ..+.++|++ .|-.++++.||-+|.|. + + + .|- +.+-...|+-.|.+
T Consensus 56 lv~~~HG~g~~~s-----~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd--G-l--------~-~yi~~~d~~v~D~~~~~~ 118 (313)
T KOG1455|consen 56 LVFLCHGYGEHSS-----WRYQSTAKRLAKSGFAVYAIDYEGHGRSD--G-L--------H-AYVPSFDLVVDDVISFFD 118 (313)
T ss_pred EEEEEcCCcccch-----hhHHHHHHHHHhCCCeEEEeeccCCCcCC--C-C--------c-ccCCcHHHHHHHHHHHHH
Confidence 5555555543322 334444444 37889999999999996 3 1 1 233 34677888888988
Q ss_pred HHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccccc
Q 038117 167 HIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILYYG 216 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~~ 216 (500)
.++..-..++-|..++|.|.||+++-.+..|.|+..+|++.+. |+....
T Consensus 119 ~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilva-Pmc~i~ 167 (313)
T KOG1455|consen 119 SIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVA-PMCKIS 167 (313)
T ss_pred HHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeee-cccccC
Confidence 8886655567899999999999999999999999999998765 665443
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.29 E-value=0.0017 Score=65.61 Aligned_cols=118 Identities=19% Similarity=0.184 Sum_probs=88.6
Q ss_pred eEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCH
Q 038117 75 QRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNS 154 (500)
Q Consensus 75 QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~ 154 (500)
-||++-.. + ..+||++|.+=|--...-.+ .-.+..+|.. |=.+|++.-|.||.|.+-. +-.-.|+
T Consensus 32 I~~h~~e~-g-~~~gP~illlHGfPe~wysw--r~q~~~la~~-~~rviA~DlrGyG~Sd~P~----------~~~~Yt~ 96 (322)
T KOG4178|consen 32 IRLHYVEG-G-PGDGPIVLLLHGFPESWYSW--RHQIPGLASR-GYRVIAPDLRGYGFSDAPP----------HISEYTI 96 (322)
T ss_pred EEEEEEee-c-CCCCCEEEEEccCCccchhh--hhhhhhhhhc-ceEEEecCCCCCCCCCCCC----------CcceeeH
Confidence 67777776 3 56799888887753222111 1123344554 4789999999999987522 3334688
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
..-.+|+..++.++. ..+++++|++||+++|=+++++||+.+.|-+..|.|-.
T Consensus 97 ~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 97 DELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 888899999999877 26899999999999999999999999999988887754
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.27 E-value=0.002 Score=66.55 Aligned_cols=74 Identities=18% Similarity=0.132 Sum_probs=57.1
Q ss_pred ceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCC
Q 038117 120 ALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYP 199 (500)
Q Consensus 120 A~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP 199 (500)
-.++.+++|.+|.|.+.. ...+.++..+|+..+++.+ .. .+++++|.|+||.+|.-+..++|
T Consensus 158 ~~v~~~d~~g~G~s~~~~------------~~~~~~~~~~~~~~~~~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~~ 219 (371)
T PRK14875 158 RPVIALDLPGHGASSKAV------------GAGSLDELAAAVLAFLDAL----GI--ERAHLVGHSMGGAVALRLAARAP 219 (371)
T ss_pred CEEEEEcCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHhc----CC--ccEEEEeechHHHHHHHHHHhCc
Confidence 689999999999995432 1245667777777776543 21 47999999999999999999999
Q ss_pred CeEEEEEecccc
Q 038117 200 HVVIGSLASSAP 211 (500)
Q Consensus 200 ~~v~gavASSAp 211 (500)
+.+.+.+.-+++
T Consensus 220 ~~v~~lv~~~~~ 231 (371)
T PRK14875 220 QRVASLTLIAPA 231 (371)
T ss_pred hheeEEEEECcC
Confidence 999888776544
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.26 E-value=0.0015 Score=65.65 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=56.0
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+-.+|++.+|-||.|..-. +.. .+.+.-.+|+..+++.+ .. .+++++|+|+||++|..+-.+|
T Consensus 60 ~~~vi~~D~~G~G~S~~~~----------~~~-~~~~~~~~~~~~~~~~~----~~--~~~~lvG~S~Gg~va~~~a~~~ 122 (286)
T PRK03204 60 RFRCVAPDYLGFGLSERPS----------GFG-YQIDEHARVIGEFVDHL----GL--DRYLSMGQDWGGPISMAVAVER 122 (286)
T ss_pred CcEEEEECCCCCCCCCCCC----------ccc-cCHHHHHHHHHHHHHHh----CC--CCEEEEEECccHHHHHHHHHhC
Confidence 3689999999999985422 111 34555555566555543 22 5799999999999999999999
Q ss_pred CCeEEEEEecccc
Q 038117 199 PHVVIGSLASSAP 211 (500)
Q Consensus 199 P~~v~gavASSAp 211 (500)
|+.+.+.+-.+++
T Consensus 123 p~~v~~lvl~~~~ 135 (286)
T PRK03204 123 ADRVRGVVLGNTW 135 (286)
T ss_pred hhheeEEEEECcc
Confidence 9999998876544
No 42
>PRK10985 putative hydrolase; Provisional
Probab=97.25 E-value=0.0015 Score=66.86 Aligned_cols=85 Identities=22% Similarity=0.280 Sum_probs=61.4
Q ss_pred HHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHH
Q 038117 115 AHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWF 194 (500)
Q Consensus 115 A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~ 194 (500)
..+.|-.+|.+.+|-+|.|.... .+ ..+.. .++|++.+++.+++.+. ..|++++|.|.||.+++.+
T Consensus 83 l~~~G~~v~~~d~rG~g~~~~~~--------~~---~~~~~-~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 83 AQKRGWLGVVMHFRGCSGEPNRL--------HR---IYHSG-ETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred HHHCCCEEEEEeCCCCCCCccCC--------cc---eECCC-chHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHH
Confidence 44568889999999999763211 11 11122 26899889998887654 3689999999999988888
Q ss_pred HHhCCCe--EEEEEecccccc
Q 038117 195 RLKYPHV--VIGSLASSAPIL 213 (500)
Q Consensus 195 R~kYP~~--v~gavASSApv~ 213 (500)
-.++++. +.+++.=|+|..
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCC
Confidence 7777654 778887777763
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.24 E-value=0.0024 Score=64.81 Aligned_cols=83 Identities=24% Similarity=0.283 Sum_probs=67.7
Q ss_pred HhcCceEEEEeeeeeecCC--CCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHH
Q 038117 116 HQFKALIVILEHRYYGKSV--PFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATW 193 (500)
Q Consensus 116 ~~~gA~~v~lEHRyyG~S~--P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw 193 (500)
.+-|-.++++.||-+|.|. +-+. .-+-++-..|+..|++.++... .+.|++++|+|.||.+|.-
T Consensus 58 ~~~G~~V~~~D~RGhG~S~r~~rg~------------~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~ 123 (298)
T COG2267 58 AARGFDVYALDLRGHGRSPRGQRGH------------VDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALL 123 (298)
T ss_pred HhCCCEEEEecCCCCCCCCCCCcCC------------chhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHH
Confidence 3448899999999999997 3221 1226788899999999888652 3579999999999999999
Q ss_pred HHHhCCCeEEEEEeccccc
Q 038117 194 FRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 194 ~R~kYP~~v~gavASSApv 212 (500)
+-..+|+-+.|++.||.-+
T Consensus 124 ~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 124 YLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred HHHhCCccccEEEEECccc
Confidence 9999999999999998443
No 44
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.23 E-value=0.0016 Score=71.76 Aligned_cols=111 Identities=13% Similarity=-0.081 Sum_probs=78.8
Q ss_pred CCcEEEEeCCCCCCCC--cccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDD--NIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~--~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
..|++|+..|.+.... ..........++ +.|-.+|...+|-+|.|--.- ..++ .+-.+|+..+|
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~------------~~~~-~~~~~D~~~~i 86 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDTRGRGASEGEF------------DLLG-SDEAADGYDLV 86 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEeccccccCCCce------------EecC-cccchHHHHHH
Confidence 4688888887764321 000111222333 459999999999999985211 1223 56789999999
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
++++++- ..+.++.++|.||||.++......+|..+.|.++.++...
T Consensus 87 ~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 87 DWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 9998662 2246899999999999999999999999999988776643
No 45
>PLN02578 hydrolase
Probab=97.23 E-value=0.0012 Score=68.44 Aligned_cols=99 Identities=22% Similarity=0.195 Sum_probs=69.2
Q ss_pred CCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 86 GGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
+.|.||+|.-|.-++... + ...+..+++ +-.+|++..|-+|.|-.-. .. .+.+...+|++.|+
T Consensus 84 g~g~~vvliHG~~~~~~~-w--~~~~~~l~~--~~~v~~~D~~G~G~S~~~~-----------~~-~~~~~~a~~l~~~i 146 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFH-W--RYNIPELAK--KYKVYALDLLGFGWSDKAL-----------IE-YDAMVWRDQVADFV 146 (354)
T ss_pred CCCCeEEEECCCCCCHHH-H--HHHHHHHhc--CCEEEEECCCCCCCCCCcc-----------cc-cCHHHHHHHHHHHH
Confidence 445677766664332211 1 122344555 4689999999999985311 12 36666678888888
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA 207 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA 207 (500)
+.+.. .|++++|+|+||++|..+..+||+.+.+.+-
T Consensus 147 ~~~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvL 182 (354)
T PLN02578 147 KEVVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182 (354)
T ss_pred HHhcc------CCeEEEEECHHHHHHHHHHHhChHhcceEEE
Confidence 76642 5899999999999999999999999987764
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.17 E-value=0.0037 Score=62.45 Aligned_cols=105 Identities=13% Similarity=0.030 Sum_probs=72.5
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHh---cCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQ---FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~---~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
.+|+++.||-+...+.. .....+|+. .|-.++.+++|-+|+|.+.. .+.++...|+..++
T Consensus 27 ~~vv~i~gg~~~~~g~~---~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--------------~~~~~~~~d~~~~~ 89 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSH---RQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--------------LGFEGIDADIAAAI 89 (274)
T ss_pred CeEEEEeCCccccCCch---hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCHHHHHHHHHHHH
Confidence 46777787654322211 112344443 47799999999999985411 24567889999999
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+++... ...+++++|.|.||.++..+... |+.+.|.+.-|+++
T Consensus 90 ~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 90 DAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 99986542 12469999999999999888654 56788888777654
No 47
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.17 E-value=0.00098 Score=65.19 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=62.1
Q ss_pred CCCCc-EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 86 GGNSP-ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 86 ~~ggP-Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
+.|.| |+|+-|.-++... + ..++..+++ +--++++++|-||.|.... ..+.++.++|+..+
T Consensus 10 G~g~~~ivllHG~~~~~~~-w--~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~-------------~~~~~~~~~~l~~~ 71 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNAEV-W--RCIDEELSS--HFTLHLVDLPGFGRSRGFG-------------ALSLADMAEAVLQQ 71 (256)
T ss_pred CCCCCeEEEECCCCCChhH-H--HHHHHHHhc--CCEEEEecCCCCCCCCCCC-------------CCCHHHHHHHHHhc
Confidence 44444 7676664333221 1 123333443 3789999999999995311 13566655554421
Q ss_pred HHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe
Q 038117 165 LLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA 207 (500)
Q Consensus 165 i~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA 207 (500)
. ..+++++|.|+||.+|..+..++|+.+.+.+.
T Consensus 72 --------~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil 104 (256)
T PRK10349 72 --------A--PDKAIWLGWSLGGLVASQIALTHPERVQALVT 104 (256)
T ss_pred --------C--CCCeEEEEECHHHHHHHHHHHhChHhhheEEE
Confidence 1 14789999999999999999999999998764
No 48
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.13 E-value=0.0028 Score=62.49 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=83.2
Q ss_pred eEEEeecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecC
Q 038117 54 FFYNQTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKS 133 (500)
Q Consensus 54 ~~f~Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S 133 (500)
.||+-.-|=-- +.+..||+--+.... .+.||||+..=|-|...-.+ .-+..++......-++++.-|-+|+|
T Consensus 45 ~yFdekedv~i--~~~~~t~n~Y~t~~~----~t~gpil~l~HG~G~S~LSf--A~~a~el~s~~~~r~~a~DlRgHGeT 116 (343)
T KOG2564|consen 45 DYFDEKEDVSI--DGSDLTFNVYLTLPS----ATEGPILLLLHGGGSSALSF--AIFASELKSKIRCRCLALDLRGHGET 116 (343)
T ss_pred Hhhcccccccc--CCCcceEEEEEecCC----CCCccEEEEeecCcccchhH--HHHHHHHHhhcceeEEEeeccccCcc
Confidence 45776666543 223457876666555 45799998886655322111 24556788888889999999999999
Q ss_pred CCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHH
Q 038117 134 VPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 134 ~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R 195 (500)
+--+. + -|+.|--..|+...+++ -|+-...|+|++|+|.||++|+...
T Consensus 117 k~~~e--------~---dlS~eT~~KD~~~~i~~---~fge~~~~iilVGHSmGGaIav~~a 164 (343)
T KOG2564|consen 117 KVENE--------D---DLSLETMSKDFGAVIKE---LFGELPPQIILVGHSMGGAIAVHTA 164 (343)
T ss_pred ccCCh--------h---hcCHHHHHHHHHHHHHH---HhccCCCceEEEeccccchhhhhhh
Confidence 86432 1 28888888998765544 4444456899999999999998764
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.12 E-value=0.0022 Score=68.10 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCCC-CcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPID-DNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~-~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
...|++|+.||-+... ..+ ..+.+...+.|-.++.++.|-+|+|..... ..+... ..++ ++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~---~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-------~~d~~~--~~~a------vl 253 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYY---RLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-------TQDSSL--LHQA------VL 253 (414)
T ss_pred CCccEEEEeCCcccchhhhH---HHHHHHHHhCCCEEEEECCCCCCCCCCCCc-------cccHHH--HHHH------HH
Confidence 3479999998865431 111 122333445689999999999999965320 111100 1122 33
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
.+++..-..+..++.++|.|+||.+|..+..++|+.+.|.++-++|+.
T Consensus 254 d~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 254 NALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 344432222446899999999999999999999999999999888764
No 50
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.07 E-value=0.0023 Score=66.62 Aligned_cols=76 Identities=13% Similarity=0.079 Sum_probs=57.5
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH-h
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL-K 197 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~-k 197 (500)
+-.+|++.+|-||.|.+.. ... .|.+...+|+..|++.+.. .|++++|.|+||+++..+.. +
T Consensus 114 ~~~via~Dl~G~G~S~~~~----------~~~-~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~ 176 (360)
T PLN02679 114 NYTVYAIDLLGFGASDKPP----------GFS-YTMETWAELILDFLEEVVQ------KPTVLIGNSVGSLACVIAASES 176 (360)
T ss_pred CCEEEEECCCCCCCCCCCC----------Ccc-ccHHHHHHHHHHHHHHhcC------CCeEEEEECHHHHHHHHHHHhc
Confidence 5799999999999996422 112 3777777788888775431 48999999999999876654 6
Q ss_pred CCCeEEEEEecccc
Q 038117 198 YPHVVIGSLASSAP 211 (500)
Q Consensus 198 YP~~v~gavASSAp 211 (500)
+|+.|.+.+.-+++
T Consensus 177 ~P~rV~~LVLi~~~ 190 (360)
T PLN02679 177 TRDLVRGLVLLNCA 190 (360)
T ss_pred ChhhcCEEEEECCc
Confidence 89999988766554
No 51
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.06 E-value=0.0044 Score=64.56 Aligned_cols=133 Identities=19% Similarity=0.189 Sum_probs=82.1
Q ss_pred EEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCC-C------C-----chhhcc
Q 038117 77 YVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPF-G------S-----RKAALK 144 (500)
Q Consensus 77 Y~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~-~------~-----~~~~~~ 144 (500)
-.++++ ++..-|||++||-|.-.......-....+|++++.++|.+-.=-+|. +|. + + ++.++
T Consensus 26 i~ydd~---Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~-R~q~~A~~~~~~~D~~iLk~~L- 100 (403)
T PF11144_consen 26 ISYDDE---KEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCN-RPQYGAKFYFDDIDKEILKKSL- 100 (403)
T ss_pred eecCCC---CCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheee-ccccCchhcCCHHHHHHHHHHH-
Confidence 334554 67788999999987532211111123357999999999987666552 231 1 1 01110
Q ss_pred ccccc-----c-CCCHHHHHHHHHHHHHHHh-------------------------------------------hhcCC-
Q 038117 145 NARHR-----G-YFNSAQALADYASILLHIK-------------------------------------------DKYNA- 174 (500)
Q Consensus 145 s~~nl-----~-yLt~~QALaD~a~fi~~~k-------------------------------------------~~~~~- 174 (500)
..-++ . +-+..+++.-+.+.|..+| +.+..
T Consensus 101 ~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~ 180 (403)
T PF11144_consen 101 EKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKN 180 (403)
T ss_pred HHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Confidence 01122 1 1234444444444444333 22222
Q ss_pred C-CCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 175 T-HAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 175 ~-~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
. +-|+|++||||||-||......=|++|+|.+=-||-+..
T Consensus 181 ~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 181 GGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred cCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 2 359999999999999999999999999999999988764
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.97 E-value=0.0026 Score=78.38 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=76.4
Q ss_pred EEEEeccccCC-CCC-cEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCC
Q 038117 76 RYVINSKFWGG-GNS-PILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFN 153 (500)
Q Consensus 76 RY~~n~~~~~~-~gg-PIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt 153 (500)
+||+...-+.. +++ ||+|+-|.=++... + ..++..+++ +..+|++++|.||.|...+... ....-..++
T Consensus 1357 ~~~i~~~~~G~~~~~~~vVllHG~~~s~~~-w--~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~----~~~~~~~~s 1427 (1655)
T PLN02980 1357 SCLIKVHEVGQNAEGSVVLFLHGFLGTGED-W--IPIMKAISG--SARCISIDLPGHGGSKIQNHAK----ETQTEPTLS 1427 (1655)
T ss_pred EEEEEEEecCCCCCCCeEEEECCCCCCHHH-H--HHHHHHHhC--CCEEEEEcCCCCCCCCCccccc----cccccccCC
Confidence 56665544421 224 56655554443322 1 123334444 3589999999999996432100 001112467
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
++...+|++.+++.+. ..+++++|.|+||++|..+..+||+.+.+.+.-++
T Consensus 1428 i~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1428 VELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 8887788888877543 14899999999999999999999999998775443
No 53
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.95 E-value=0.0053 Score=59.51 Aligned_cols=117 Identities=20% Similarity=0.189 Sum_probs=72.7
Q ss_pred CCcEEEEeCC-CCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 88 NSPILAFLGA-EAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 88 ggPIfl~~gG-E~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
.-|++|.+=| -++.+.+...++ +.++|++.|.++|+-|--.-. .+..-++- . +....-.... .+.++..|+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~-~~~lAd~~GfivvyP~~~~~~--~~~~cw~w--~--~~~~~~g~~d-~~~i~~lv~ 86 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSG-WNALADREGFIVVYPEQSRRA--NPQGCWNW--F--SDDQQRGGGD-VAFIAALVD 86 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcC-HHHHhhcCCeEEEcccccccC--CCCCcccc--c--ccccccCccc-hhhHHHHHH
Confidence 3576665544 334443332233 468999999999998742111 11110000 0 0000111111 234566777
Q ss_pred HHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 167 HIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++..+++.+..++.+.|-|-||+++.-+-..||++|.|.-..|++.
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 7888888888999999999999999999999999999876666554
No 54
>PRK06489 hypothetical protein; Provisional
Probab=96.85 E-value=0.02 Score=59.41 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=65.8
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHH------hcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAH------QFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADY 161 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~------~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~ 161 (500)
+-||+|.-|+-++..... ...+...+.. .-+-.||++..|-||.|....+. ...+..-.+.++...|+
T Consensus 69 gpplvllHG~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL-SPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchhhhc-cchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC-----CCCCCCcccHHHHHHHH
Confidence 345777777655433211 1122222210 12468999999999998532210 00111124666666666
Q ss_pred HHHHHHHhhhcCCCCCCE-EEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 162 ASILLHIKDKYNATHAPV-IAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 162 a~fi~~~k~~~~~~~~pw-I~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
+.++ ...++. .++ +++|.|+||++|..+..+||+.+.+.|.-+
T Consensus 143 ~~~l---~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~ 186 (360)
T PRK06489 143 YRLV---TEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMA 186 (360)
T ss_pred HHHH---HHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeec
Confidence 5543 122222 255 689999999999999999999999888543
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=96.84 E-value=0.0027 Score=69.59 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=56.9
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHH--H
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFR--L 196 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R--~ 196 (500)
+-.++++++|.||.|.+.. .-+-.|.++..+|++.+++.+.. ..|++++|+|+||+++.-+. .
T Consensus 51 ~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~a~dl~~~i~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 51 RFRVVAYDVRGAGRSSAPK----------RTAAYTLARLADDFAAVIDAVSP-----DRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred ceEEEEecCCCCCCCCCCC----------cccccCHHHHHHHHHHHHHHhCC-----CCcEEEEecChHHHHHHHHHhCc
Confidence 4689999999999996432 11246899999999999987642 25799999999998774333 3
Q ss_pred hCCCeEEEEEeccccc
Q 038117 197 KYPHVVIGSLASSAPI 212 (500)
Q Consensus 197 kYP~~v~gavASSApv 212 (500)
++|+.+.+..+.++|.
T Consensus 116 ~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 116 RAAGRIASFTSVSGPS 131 (582)
T ss_pred cchhhhhhheeccCCc
Confidence 4566666555555553
No 56
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.83 E-value=0.0038 Score=67.38 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=70.1
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHH--hcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHH-HHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAH--QFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYA-SIL 165 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~--~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a-~fi 165 (500)
.||+|.-|.-++... +.. -.+..+++ +-+--+|+++.|-||.|.... + ...+.++-++|+. .++
T Consensus 202 ~~VVLlHG~~~s~~~-W~~-~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~----------~-~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 202 EDVLFIHGFISSSAF-WTE-TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA----------D-SLYTLREHLEMIERSVL 268 (481)
T ss_pred CeEEEECCCCccHHH-HHH-HHHHHHHHHhhCCCEEEEECCCCCCCCcCCC----------C-CcCCHHHHHHHHHHHHH
Confidence 467777776444321 110 01123332 236799999999999985321 1 2357777777774 455
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+. ..|++++|.|+||++|..+..+||+.+.+.+.-++|.
T Consensus 269 ~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 269 ERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 5432 2589999999999999999999999998887766543
No 57
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.83 E-value=0.0047 Score=61.90 Aligned_cols=109 Identities=11% Similarity=0.084 Sum_probs=70.7
Q ss_pred cccCCCCCcEEEEeCCCCCCCCcccccchHHH----hHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHH
Q 038117 82 KFWGGGNSPILAFLGAEAPIDDNIQLSGFTYE----NAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQA 157 (500)
Q Consensus 82 ~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~----~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QA 157 (500)
..+ ++++|+++++-|-+.-.. ..+... +.++-+..+|++.-|.++.+ .+.. .-.+++..
T Consensus 30 ~~f-~~~~p~vilIHG~~~~~~----~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~-~y~~-----------a~~~~~~v 92 (275)
T cd00707 30 SNF-NPSRPTRFIIHGWTSSGE----ESWISDLRKAYLSRGDYNVIVVDWGRGANP-NYPQ-----------AVNNTRVV 92 (275)
T ss_pred cCC-CCCCCcEEEEcCCCCCCC----CcHHHHHHHHHHhcCCCEEEEEECcccccc-ChHH-----------HHHhHHHH
Confidence 444 566777777766433210 122223 33345788999998866322 1110 11345666
Q ss_pred HHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe
Q 038117 158 LADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA 207 (500)
Q Consensus 158 LaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA 207 (500)
.+|++.+++.+.+.......+++++|.|+||.+|..+-..+|+.+...++
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~ 142 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITG 142 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEE
Confidence 67888899988776544446899999999999999999999987665544
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.79 E-value=0.012 Score=60.96 Aligned_cols=87 Identities=10% Similarity=0.162 Sum_probs=65.3
Q ss_pred chHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHH-HHHHHHHHHHhhhcCCCCCCEEEeccChh
Q 038117 109 GFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQAL-ADYASILLHIKDKYNATHAPVIAIGASYG 187 (500)
Q Consensus 109 g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QAL-aD~a~fi~~~k~~~~~~~~pwI~~GGSY~ 187 (500)
.+...+++ .|-.++.+.+|.+|.|.. .++.+.-. .|+...++++++..+ ..|++++|.|+|
T Consensus 85 ~~~~~L~~-~G~~V~~~D~~g~g~s~~---------------~~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~G 146 (350)
T TIGR01836 85 SLVRGLLE-RGQDVYLIDWGYPDRADR---------------YLTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQG 146 (350)
T ss_pred hHHHHHHH-CCCeEEEEeCCCCCHHHh---------------cCCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHH
Confidence 34444444 577899999998876532 23455444 347777888876654 258999999999
Q ss_pred hHHHHHHHHhCCCeEEEEEecccccc
Q 038117 188 GELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 188 G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
|++++.+-.++|+.+.+.+..++|+.
T Consensus 147 G~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 147 GTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHhCchheeeEEEeccccc
Confidence 99999999999999999988888875
No 59
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.75 E-value=0.016 Score=61.70 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=74.0
Q ss_pred eccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhc-----CceEEEEeeeeeecCCCCCCchhhccccccccCCCH
Q 038117 80 NSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQF-----KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNS 154 (500)
Q Consensus 80 n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~-----gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~ 154 (500)
....| .+.+|.+|++=|=+..... ..++.++++.+ +..||++..|-+|.|. +.. .. . .+
T Consensus 33 ~~s~F-n~~~ptvIlIHG~~~s~~~---~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~-y~~------a~---~--~t 96 (442)
T TIGR03230 33 ADCNF-NHETKTFIVIHGWTVTGMF---ESWVPKLVAALYEREPSANVIVVDWLSRAQQH-YPT------SA---A--YT 96 (442)
T ss_pred hhcCc-CCCCCeEEEECCCCcCCcc---hhhHHHHHHHHHhccCCCEEEEEECCCcCCCC-Ccc------cc---c--cH
Confidence 34556 5667777777765432110 12344454432 5899999999999773 331 11 1 23
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEE
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIG 204 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~g 204 (500)
..+-+|++.|++.+...+...-.++.++|.|.||.+|..+-..+|+.+..
T Consensus 97 ~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~r 146 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNR 146 (442)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeE
Confidence 66668899999988765544446899999999999999999999987653
No 60
>PLN02442 S-formylglutathione hydrolase
Probab=96.59 E-value=0.017 Score=58.01 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=66.9
Q ss_pred CCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeee-----cCC--CCCCchhhcc--cccc---ccCCC
Q 038117 86 GGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYG-----KSV--PFGSRKAALK--NARH---RGYFN 153 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG-----~S~--P~~~~~~~~~--s~~n---l~yLt 153 (500)
+.+-||++++=|.+.-...+...+-+.+++.+.|.+||+.+=...| .+. -++....-+. ..++ +++++
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3457888877775432221211122345666778888888744333 110 0000000000 0011 23332
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
..++++...+....... ...+++++|.|+||.+|.++-.+||+.+.++++-|++.
T Consensus 124 --~~~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 124 --YVVKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred --hHHHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 23344433333322222 23578999999999999999999999999888877654
No 61
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.56 E-value=0.014 Score=59.90 Aligned_cols=150 Identities=17% Similarity=0.291 Sum_probs=102.1
Q ss_pred CCCCceeeEEEeecCCCC--CCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccch-HHHhHHhcCceEE
Q 038117 47 SNHGFETFFYNQTIDHFS--YGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGF-TYENAHQFKALIV 123 (500)
Q Consensus 47 ~~~~~~~~~f~Q~lDHf~--~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~-~~~~A~~~gA~~v 123 (500)
....+.++.|.-|++|.= .-|...++=.-+|.+-. -|+.+.+||.+.+.|-|+.. ++-...+ ...|+++ |-.-+
T Consensus 49 ~~~~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~~P~-~~~~~~rp~~IhLagTGDh~-f~rR~~l~a~pLl~~-gi~s~ 125 (348)
T PF09752_consen 49 SDCKIREGEFRSPLAFYLPGLLPEESRTARFQLLLPK-RWDSPYRPVCIHLAGTGDHG-FWRRRRLMARPLLKE-GIASL 125 (348)
T ss_pred CceEEEEeEeCCchhhhccccCChhHhheEEEEEECC-ccccCCCceEEEecCCCccc-hhhhhhhhhhHHHHc-CcceE
Confidence 344578899999987752 11333344333444444 34456699999999988853 3322233 3467888 99999
Q ss_pred EEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEE
Q 038117 124 ILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVI 203 (500)
Q Consensus 124 ~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~ 203 (500)
.||.=|||.=+|-...--.+.++.+| ++=..|.+.+...+..+++.+ +. .|+.+.|-|.||.+|+-..-.+|.-+.
T Consensus 126 ~le~Pyyg~RkP~~Q~~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G~--~~~g~~G~SmGG~~A~laa~~~p~pv~ 201 (348)
T PF09752_consen 126 ILENPYYGQRKPKDQRRSSLRNVSDL-FVMGRATILESRALLHWLERE-GY--GPLGLTGISMGGHMAALAASNWPRPVA 201 (348)
T ss_pred EEecccccccChhHhhcccccchhHH-HHHHhHHHHHHHHHHHHHHhc-CC--CceEEEEechhHhhHHhhhhcCCCcee
Confidence 99999999999965422112222332 222367777888888888877 32 599999999999999999999998643
No 62
>PRK11460 putative hydrolase; Provisional
Probab=96.48 E-value=0.019 Score=55.92 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++++++++..+++.+...+..+..+++++|.|.||++|.++..++|+.+.+.++-|+.+
T Consensus 80 ~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 80 VAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 45556666667777766666666789999999999999999999999888877766543
No 63
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.38 E-value=0.0069 Score=57.36 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=69.9
Q ss_pred EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhh
Q 038117 91 ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKD 170 (500)
Q Consensus 91 Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~ 170 (500)
||++-||=.-.........+...+|++.|..++.+++|-. | + -+..+++.|+...++++.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p-----------~----~~~p~~~~D~~~a~~~l~~ 61 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----P-----------E----APFPAALEDVKAAYRWLLK 61 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----T-----------T----SSTTHHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----c-----------c----ccccccccccccceeeecc
Confidence 5666777554332222234667789999999999999953 3 1 1345789999998888876
Q ss_pred h---cCCCCCCEEEeccChhhHHHHHHHHhCCCe----EEEEEeccccc
Q 038117 171 K---YNATHAPVIAIGASYGGELATWFRLKYPHV----VIGSLASSAPI 212 (500)
Q Consensus 171 ~---~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~----v~gavASSApv 212 (500)
+ ++.+..+++++|-|-||.||+.+-+...+. +.+.+..|++.
T Consensus 62 ~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 62 NADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 5 444456899999999999999988766554 66777777543
No 64
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.35 E-value=0.0066 Score=67.87 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=70.4
Q ss_pred cEEE-EeCCCCCCCCcccccchHHH--hHHhcCceEEEEeee---eeecCCCCCCchhhccccccccCCCHHHHHHHHHH
Q 038117 90 PILA-FLGAEAPIDDNIQLSGFTYE--NAHQFKALIVILEHR---YYGKSVPFGSRKAALKNARHRGYFNSAQALADYAS 163 (500)
Q Consensus 90 PIfl-~~gGE~~~~~~~~~~g~~~~--~A~~~gA~~v~lEHR---yyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~ 163 (500)
|+++ .-||.....+ .++..+ .-...|.+||...-| .||+...... -..+.... ++|+-.
T Consensus 395 P~i~~~hGGP~~~~~----~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~-------~~~~g~~~----~~D~~~ 459 (620)
T COG1506 395 PLIVYIHGGPSAQVG----YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAI-------RGDWGGVD----LEDLIA 459 (620)
T ss_pred CEEEEeCCCCccccc----cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhh-------hhccCCcc----HHHHHH
Confidence 6554 5566533332 133332 344558899999888 6776543211 12333344 455555
Q ss_pred HHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccccc
Q 038117 164 ILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILYY 215 (500)
Q Consensus 164 fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~ 215 (500)
.++.+++.-..+..++.++||||||-++.|.-.+.| .+.++++..+++...
T Consensus 460 ~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~ 510 (620)
T COG1506 460 AVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL 510 (620)
T ss_pred HHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh
Confidence 555444332334468999999999999999999999 999999999888543
No 65
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.33 E-value=0.017 Score=65.51 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=65.5
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhc---CceEEEEeeeeeecCCCCCCchh-hccccccccCC----------C
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQF---KALIVILEHRYYGKSVPFGSRKA-ALKNARHRGYF----------N 153 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~---gA~~v~lEHRyyG~S~P~~~~~~-~~~s~~nl~yL----------t 153 (500)
+.|+++++-|-+.-.. .+..+|+.+ |-.+|.++||.+|+|.--.+.+. +-.+..-+.|+ +
T Consensus 448 g~P~VVllHG~~g~~~------~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE------NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCHH------HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 3466666666443221 223444443 56799999999999943211000 00011224453 4
Q ss_pred HHHHHHHHHHHHHHHh------hhc----CCCCCCEEEeccChhhHHHHHHHHh
Q 038117 154 SAQALADYASILLHIK------DKY----NATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k------~~~----~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
.+|++.|+..++..++ ..+ ..+..||..+|+|.||.++.-+-..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 5999999999999888 221 1346799999999999999988743
No 66
>PRK10115 protease 2; Provisional
Probab=96.29 E-value=0.018 Score=65.16 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=72.9
Q ss_pred CcEEEEeCC-CCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHH
Q 038117 89 SPILAFLGA-EAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLH 167 (500)
Q Consensus 89 gPIfl~~gG-E~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~ 167 (500)
.|++||.=| .+..... .-.....-++.+ |..++..--|-=| =++.- + .+.-+.+.=.+...|+...+++
T Consensus 445 ~P~ll~~hGg~~~~~~p-~f~~~~~~l~~r-G~~v~~~n~RGs~---g~G~~---w--~~~g~~~~k~~~~~D~~a~~~~ 514 (686)
T PRK10115 445 NPLLVYGYGSYGASIDA-DFSFSRLSLLDR-GFVYAIVHVRGGG---ELGQQ---W--YEDGKFLKKKNTFNDYLDACDA 514 (686)
T ss_pred CCEEEEEECCCCCCCCC-CccHHHHHHHHC-CcEEEEEEcCCCC---ccCHH---H--HHhhhhhcCCCcHHHHHHHHHH
Confidence 587777644 3322110 001122335553 6766666667522 12210 0 0111233334778999888888
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
+.++--.+..++.+.||||||.|++|.-..+|++|.|+|+..+.+..
T Consensus 515 Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 515 LLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 87653335568999999999999999999999999999999877643
No 67
>PRK07581 hypothetical protein; Validated
Probab=96.28 E-value=0.011 Score=60.48 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=62.4
Q ss_pred CCcEEEEeCCCCCCCCcccccchH----HHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFT----YENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYAS 163 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~----~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~ 163 (500)
+.|++|+.+|-+.....+ .++ ..++ .-+--||++..|-||.|.+-.+... ..+.+.+...+. ..|++.
T Consensus 40 ~~~~vll~~~~~~~~~~~---~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~~~~~~---~~~~~~ 111 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDN---EWLIGPGRALD-PEKYFIIIPNMFGNGLSSSPSNTPA-PFNAARFPHVTI---YDNVRA 111 (339)
T ss_pred CCCEEEEeCCCCCCcccc---hhhccCCCccC-cCceEEEEecCCCCCCCCCCCCCCC-CCCCCCCCceeH---HHHHHH
Confidence 457788887654321111 011 1222 1246799999999999964221000 001222222333 233333
Q ss_pred HHHHHhhhcCCCCCC-EEEeccChhhHHHHHHHHhCCCeEEEEEec
Q 038117 164 ILLHIKDKYNATHAP-VIAIGASYGGELATWFRLKYPHVVIGSLAS 208 (500)
Q Consensus 164 fi~~~k~~~~~~~~p-wI~~GGSY~G~LAaw~R~kYP~~v~gavAS 208 (500)
....+...++. .+ .+++|+|+||++|..+...||+.|.+-+.-
T Consensus 112 ~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli 155 (339)
T PRK07581 112 QHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPI 155 (339)
T ss_pred HHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheee
Confidence 22223222332 46 589999999999999999999998876543
No 68
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=96.23 E-value=0.011 Score=52.07 Aligned_cols=93 Identities=23% Similarity=0.210 Sum_probs=60.8
Q ss_pred cEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHh
Q 038117 90 PILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIK 169 (500)
Q Consensus 90 PIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k 169 (500)
||++.-|+=++... ...+...+|++ |-.++.+++|+.|.+.- .+ ..+++++++.
T Consensus 1 ~vv~~HG~~~~~~~---~~~~~~~l~~~-G~~v~~~~~~~~~~~~~----------~~-----~~~~~~~~~~------- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD---YQPLAEALAEQ-GYAVVAFDYPGHGDSDG----------AD-----AVERVLADIR------- 54 (145)
T ss_dssp EEEEECTTTTTTHH---HHHHHHHHHHT-TEEEEEESCTTSTTSHH----------SH-----HHHHHHHHHH-------
T ss_pred CEEEECCCCCCHHH---HHHHHHHHHHC-CCEEEEEecCCCCccch----------hH-----HHHHHHHHHH-------
Confidence 56666666443221 12344456666 99999999999998711 11 3344444433
Q ss_pred hhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 170 DKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 170 ~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
+... +..+++++|.|.||.+++.+-.++ ..+.+.+.-++
T Consensus 55 ~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 2222 346999999999999999999999 55556666655
No 69
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.15 E-value=0.01 Score=56.89 Aligned_cols=81 Identities=20% Similarity=0.196 Sum_probs=55.6
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCce---EEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKAL---IVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~---~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
+|||++-+|.|.+.. ...+|+.+... ++.+|+...+...| ..-|+++.+++++.-|
T Consensus 1 ~~lf~~p~~gG~~~~-------y~~la~~l~~~~~~v~~i~~~~~~~~~~--------------~~~si~~la~~y~~~I 59 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-------YRPLARALPDDVIGVYGIEYPGRGDDEP--------------PPDSIEELASRYAEAI 59 (229)
T ss_dssp -EEEEESSTTCSGGG-------GHHHHHHHTTTEEEEEEECSTTSCTTSH--------------EESSHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHH-------HHHHHHhCCCCeEEEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHHh
Confidence 489999999886543 45777877765 77777776662222 2367788777766555
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHH
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R 195 (500)
+... . +.|.+++|.|+||.||-=+.
T Consensus 60 ~~~~---~--~gp~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 60 RARQ---P--EGPYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp HHHT---S--SSSEEEEEETHHHHHHHHHH
T ss_pred hhhC---C--CCCeeehccCccHHHHHHHH
Confidence 4322 2 24999999999999986554
No 70
>PRK10162 acetyl esterase; Provisional
Probab=95.94 E-value=0.054 Score=55.38 Aligned_cols=107 Identities=14% Similarity=0.088 Sum_probs=65.3
Q ss_pred CceeeEEEEeccccCCCCCcEEEEe-CCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccc
Q 038117 71 QTFPQRYVINSKFWGGGNSPILAFL-GAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHR 149 (500)
Q Consensus 71 ~TF~QRY~~n~~~~~~~ggPIfl~~-gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl 149 (500)
+.-.-|.+.-. +++.|+++|+ ||=.-.........+...+|++.|..||.++.|--.+ .|++
T Consensus 67 g~i~~~~y~P~----~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape-~~~p------------ 129 (318)
T PRK10162 67 GQVETRLYYPQ----PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPE-ARFP------------ 129 (318)
T ss_pred CceEEEEECCC----CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCC-CCCC------------
Confidence 34455555443 2345755555 4432222111112356678999999999999883211 1222
Q ss_pred cCCCHHHHHHHHHHHHHHHhh---hcCCCCCCEEEeccChhhHHHHHHHHhCCC
Q 038117 150 GYFNSAQALADYASILLHIKD---KYNATHAPVIAIGASYGGELATWFRLKYPH 200 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~---~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~ 200 (500)
+++.|....++++.+ .++.+..+++++|.|.||.||+++-+...+
T Consensus 130 ------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~ 177 (318)
T PRK10162 130 ------QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRD 177 (318)
T ss_pred ------CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHh
Confidence 256776666666553 355555789999999999999998876643
No 71
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.82 E-value=0.019 Score=54.75 Aligned_cols=144 Identities=17% Similarity=0.263 Sum_probs=90.1
Q ss_pred EEEeccccCCCCCcEEEEe-CCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHH
Q 038117 77 YVINSKFWGGGNSPILAFL-GAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSA 155 (500)
Q Consensus 77 Y~~n~~~~~~~ggPIfl~~-gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~ 155 (500)
||+..+ ..+|.+||. ++-|.+..+.. ...-.=.+++..|+.++-|-||+|--.+ |.+-| +|.++
T Consensus 70 ~~~~~E----~S~pTlLyfh~NAGNmGhr~~---i~~~fy~~l~mnv~ivsYRGYG~S~Gsp-------sE~GL-~lDs~ 134 (300)
T KOG4391|consen 70 YLMLSE----SSRPTLLYFHANAGNMGHRLP---IARVFYVNLKMNVLIVSYRGYGKSEGSP-------SEEGL-KLDSE 134 (300)
T ss_pred eeeccc----CCCceEEEEccCCCcccchhh---HHHHHHHHcCceEEEEEeeccccCCCCc-------cccce-eccHH
Confidence 555543 357866665 44455544331 2233457889999999999999997544 12333 45554
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe----cccccccccCCCCcchhhHHHHHh
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA----SSAPILYYGDITPWTTYHSVVSKD 231 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA----SSApv~a~~~~~~~~~y~~~v~~~ 231 (500)
-|| .++-...-.++.+.|+||-|-||+.|.....|.-+.+.|++- +|=|-.++.-+.+| .+
T Consensus 135 avl-------dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~-----~~--- 199 (300)
T KOG4391|consen 135 AVL-------DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPF-----PM--- 199 (300)
T ss_pred HHH-------HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccc-----hh---
Confidence 443 344433344678999999999999999999999888887764 33333332211111 11
Q ss_pred hhcCChHHHHHHHHHHHHHH
Q 038117 232 FRDTSEECFQTIKKSWSEID 251 (500)
Q Consensus 232 ~~~~~~~C~~~i~~~~~~i~ 251 (500)
+..+--|.+++....+.|.
T Consensus 200 -k~i~~lc~kn~~~S~~ki~ 218 (300)
T KOG4391|consen 200 -KYIPLLCYKNKWLSYRKIG 218 (300)
T ss_pred -hHHHHHHHHhhhcchhhhc
Confidence 1234569998888887775
No 72
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.73 E-value=0.15 Score=51.63 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=76.8
Q ss_pred CCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
...|++++-|==|+.... ..+-.+++++++.-++.++-|-.|.| |.- +. ++-+.+..|+..||.
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw---~sv~k~Ls~~l~~~v~~vd~RnHG~S-p~~-------~~-----h~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENW---RSVAKNLSRKLGRDVYAVDVRNHGSS-PKI-------TV-----HNYEAMAEDVKLFID 114 (315)
T ss_pred CCCceEEecccccCCCCH---HHHHHHhcccccCceEEEecccCCCC-ccc-------cc-----cCHHHHHHHHHHHHH
Confidence 456888888855554321 35667899999999999999999976 644 12 447777789999999
Q ss_pred HHhhhcCCCCCCEEEeccChhh-HHHHHHHHhCCCeE
Q 038117 167 HIKDKYNATHAPVIAIGASYGG-ELATWFRLKYPHVV 202 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G-~LAaw~R~kYP~~v 202 (500)
..+..+ ...|+++.|+|.|| -+++-.-.++|..+
T Consensus 115 ~v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~ 149 (315)
T KOG2382|consen 115 GVGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLI 149 (315)
T ss_pred Hccccc--ccCCceecccCcchHHHHHHHHHhcCccc
Confidence 887543 24699999999999 99999999999983
No 73
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.71 E-value=0.025 Score=58.52 Aligned_cols=88 Identities=16% Similarity=0.199 Sum_probs=59.0
Q ss_pred CceEEEEeeee--eecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCC-EEEeccChhhHHHHHHH
Q 038117 119 KALIVILEHRY--YGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAP-VIAIGASYGGELATWFR 195 (500)
Q Consensus 119 gA~~v~lEHRy--yG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~p-wI~~GGSY~G~LAaw~R 195 (500)
+-.||++.||- +|.|.|-........-..+.--.|+++-.+|++.+++.+. . .+ ++++|.|+||++|..+.
T Consensus 72 ~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~--~~~~~l~G~S~Gg~ia~~~a 145 (351)
T TIGR01392 72 RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLG----I--EQIAAVVGGSMGGMQALEWA 145 (351)
T ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcC----C--CCceEEEEECHHHHHHHHHH
Confidence 56899999998 7777662210000000001112577777778777776543 2 35 99999999999999999
Q ss_pred HhCCCeEEEEEeccccc
Q 038117 196 LKYPHVVIGSLASSAPI 212 (500)
Q Consensus 196 ~kYP~~v~gavASSApv 212 (500)
.+||+.+.+.+..+++.
T Consensus 146 ~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 146 IDYPERVRAIVVLATSA 162 (351)
T ss_pred HHChHhhheEEEEccCC
Confidence 99999998877655443
No 74
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.56 E-value=0.035 Score=60.10 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=74.2
Q ss_pred CCCcEEEEeCCCCCCCCcccccchHHHhHHhcC-ceEEEEeeee--eecCCCCCCchhhccccccccCCCHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFK-ALIVILEHRY--YGKSVPFGSRKAALKNARHRGYFNSAQALADYAS 163 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~g-A~~v~lEHRy--yG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~ 163 (500)
+..||++++=|-+-..+.... .....++++.+ ..+|.+.+|- +|-- ... .. -..-..+|.|...
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~-~~~~~~~~~~~~~~vv~~~yRlg~~g~~-~~~----------~~-~~~~n~g~~D~~~ 159 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSL-YPGDGLAREGDNVIVVSINYRLGVLGFL-STG----------DI-ELPGNYGLKDQRL 159 (493)
T ss_pred CCCCEEEEEcCCccccCCCCC-CChHHHHhcCCCEEEEEecccccccccc-cCC----------CC-CCCcchhHHHHHH
Confidence 457988888775433222111 12345676665 8999999992 2311 001 00 1223446778777
Q ss_pred HHHHHhhh---cCCCCCCEEEeccChhhHHHHHHHHh--CCCeEEEEEecccccc
Q 038117 164 ILLHIKDK---YNATHAPVIAIGASYGGELATWFRLK--YPHVVIGSLASSAPIL 213 (500)
Q Consensus 164 fi~~~k~~---~~~~~~pwI~~GGSY~G~LAaw~R~k--YP~~v~gavASSApv~ 213 (500)
.+++++++ ++.+..++.++|.|+||.++.++... .+.+|.++|.-|++..
T Consensus 160 al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 160 ALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 77777654 45556689999999999999998876 4678999998887764
No 75
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.37 E-value=0.068 Score=57.63 Aligned_cols=67 Identities=18% Similarity=0.177 Sum_probs=50.9
Q ss_pred CceEEEEe-eeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhhHHHHHHH
Q 038117 119 KALIVILE-HRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYN-ATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 119 gA~~v~lE-HRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G~LAaw~R 195 (500)
.|.+|+++ ++--|.|.... .+ .-.+.+|+.+|+.+|++.+.+.+. ..+.|+.++|.||||..+.-+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~---------~~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a 189 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADK---------AD-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATA 189 (462)
T ss_pred ccCeEEEeCCCCcCcccCCC---------CC-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHH
Confidence 38999999 69999997532 11 125679999999999998876654 3568999999999998664443
No 76
>PLN00021 chlorophyllase
Probab=95.29 E-value=0.076 Score=54.32 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=58.3
Q ss_pred CCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
...|+++++-|-+.....+ ..+...+|+. |-.+|+.+|+-++.+.. ...+ .+.++++..+...++
T Consensus 50 g~~PvVv~lHG~~~~~~~y--~~l~~~Las~-G~~VvapD~~g~~~~~~----------~~~i--~d~~~~~~~l~~~l~ 114 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFY--SQLLQHIASH-GFIVVAPQLYTLAGPDG----------TDEI--KDAAAVINWLSSGLA 114 (313)
T ss_pred CCCCEEEEECCCCCCcccH--HHHHHHHHhC-CCEEEEecCCCcCCCCc----------hhhH--HHHHHHHHHHHhhhh
Confidence 3467777766544322211 2333445544 88999999876442211 0111 111222222211111
Q ss_pred HH-hhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeE----EEEEecccccc
Q 038117 167 HI-KDKYNATHAPVIAIGASYGGELATWFRLKYPHVV----IGSLASSAPIL 213 (500)
Q Consensus 167 ~~-k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v----~gavASSApv~ 213 (500)
.+ .......-.+++++|+|.||.+|..+..++|+.+ ..++....|+.
T Consensus 115 ~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 115 AVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 11 1111223358999999999999999999999753 34444445553
No 77
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.03 E-value=0.046 Score=51.00 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=66.7
Q ss_pred cEEEEeCCCCCCCCcccccchHHHhHHhcC-ceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHH
Q 038117 90 PILAFLGAEAPIDDNIQLSGFTYENAHQFK-ALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHI 168 (500)
Q Consensus 90 PIfl~~gGE~~~~~~~~~~g~~~~~A~~~g-A~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~ 168 (500)
||++.-|+.+....+.. ....+.+... -.++.+.-|-+|.|.+... +..++ .+|+..|++.+
T Consensus 23 ~i~~~hg~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~------~~~~~--------~~~~~~~~~~~ 85 (282)
T COG0596 23 PLVLLHGFPGSSSVWRP---VFKVLPALAARYRVIAPDLRGHGRSDPAGY------SLSAY--------ADDLAALLDAL 85 (282)
T ss_pred eEEEeCCCCCchhhhHH---HHHHhhccccceEEEEecccCCCCCCcccc------cHHHH--------HHHHHHHHHHh
Confidence 78888887765443211 1122233222 6899999999999861000 01111 67777776644
Q ss_pred hhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 169 KDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 169 k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
.. .+++++|.|+||.++..+..++|+.+.+.+.-+++..
T Consensus 86 ~~------~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 86 GL------EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred CC------CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 32 2499999999999999999999998888777776653
No 78
>PLN02209 serine carboxypeptidase
Probab=94.87 E-value=1.1 Score=47.92 Aligned_cols=85 Identities=16% Similarity=0.061 Sum_probs=51.6
Q ss_pred CceEEEEe-eeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhhH----HHH
Q 038117 119 KALIVILE-HRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYN-ATHAPVIAIGASYGGE----LAT 192 (500)
Q Consensus 119 gA~~v~lE-HRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G~----LAa 192 (500)
.|.+|++| -=--|-|.... .-.+-+.+++.+|+..|++.+=+.+. ..+.|+-++|-||||. +|.
T Consensus 117 ~anllfiDqPvGtGfSy~~~----------~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKT----------PIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred cCcEEEecCCCCCCccCCCC----------CCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 46777777 34445553211 11233445666999999887755543 3557999999999996 677
Q ss_pred HHHHhCC-----C-eEEEEEecccccc
Q 038117 193 WFRLKYP-----H-VVIGSLASSAPIL 213 (500)
Q Consensus 193 w~R~kYP-----~-~v~gavASSApv~ 213 (500)
.+..... . -..|..-+.+-+.
T Consensus 187 ~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 187 EISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHhhcccccCCceeeeeEEecCcccC
Confidence 6655431 1 2345555555443
No 79
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.84 E-value=0.15 Score=51.80 Aligned_cols=92 Identities=20% Similarity=0.279 Sum_probs=63.1
Q ss_pred CCCcEEEEeCCCCCCCCcc-cccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDNI-QLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~-~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
.+.|++||+-|=+=+.+.. ........++...|+.+|.+..|.--+- ||+ .++.|...-+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p------------------~~~~d~~~a~ 137 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFP------------------AALEDAYAAY 137 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCC------------------chHHHHHHHH
Confidence 3578777776654333322 2235677899999999999999976554 444 2455554444
Q ss_pred HHHhh---hcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 166 LHIKD---KYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 166 ~~~k~---~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
+.+.+ +++.+..++++.|.|-||.||+.+-+.
T Consensus 138 ~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 138 RWLRANAAELGIDPSRIAVAGDSAGGHLALALALA 172 (312)
T ss_pred HHHHhhhHhhCCCccceEEEecCcccHHHHHHHHH
Confidence 44432 466667789999999999999997654
No 80
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.69 E-value=0.24 Score=49.57 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=72.5
Q ss_pred CCCcE-EEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCC---------HHH
Q 038117 87 GNSPI-LAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFN---------SAQ 156 (500)
Q Consensus 87 ~ggPI-fl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt---------~~Q 156 (500)
.+.|+ |.+-|+-++......-+| +..+|.+.|=+|++.| +.|... ..|.+... .+.
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yPd------g~~~~w-------n~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYPD------GYDRAW-------NANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECcC------cccccc-------CCCcccccCCcccccCCccH
Confidence 34564 445565555544332223 4689999999999883 333221 12333333 222
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEE--EEecccc
Q 038117 157 ALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIG--SLASSAP 211 (500)
Q Consensus 157 ALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~g--avASSAp 211 (500)
..+++..+..+..+++.+..++.+.|=|=||.||.++.-.||++|.| .||+..|
T Consensus 125 -Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 125 -VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred -HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 24556667777788888888999999999999999999999999974 4555544
No 81
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=94.61 E-value=0.32 Score=51.71 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=40.2
Q ss_pred HHHHHhhhcCC--CCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 164 ILLHIKDKYNA--THAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 164 fi~~~k~~~~~--~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++..++++|.. +...+++.|.|+||..|.++-.+||+.|-++++-|+-+
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 55566666653 34578999999999999999999999999988888654
No 82
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.36 E-value=0.56 Score=50.27 Aligned_cols=71 Identities=21% Similarity=0.233 Sum_probs=46.0
Q ss_pred CceEEEEeeeeeecCCCCCCchhhcccc-ccccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhh----HHHH
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNA-RHRGYFNSAQALADYASILLHIKDKYN-ATHAPVIAIGASYGG----ELAT 192 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~-~nl~yLt~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G----~LAa 192 (500)
.|.||+||- |.+- --|+.++ ..++ .+-+....|...|.+.+=++.. ..+.++.+.|-|||| +||.
T Consensus 117 ~aNiLfLd~-------PvGv-GFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 117 EANILFLDQ-------PVGV-GFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cccEEEEec-------CCcC-CccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 378888885 4332 1112122 2233 5678888999887765443432 356799999999999 8888
Q ss_pred HHHHhC
Q 038117 193 WFRLKY 198 (500)
Q Consensus 193 w~R~kY 198 (500)
-+-..-
T Consensus 188 ~I~~~N 193 (454)
T KOG1282|consen 188 EILKGN 193 (454)
T ss_pred HHHhcc
Confidence 777653
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=94.33 E-value=0.33 Score=49.46 Aligned_cols=125 Identities=21% Similarity=0.269 Sum_probs=83.6
Q ss_pred CceeeEEEEeccccCCCCCc-EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccc
Q 038117 71 QTFPQRYVINSKFWGGGNSP-ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHR 149 (500)
Q Consensus 71 ~TF~QRY~~n~~~~~~~ggP-Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl 149 (500)
+-|.-=.|+.+.. .+-.| |++.-|=||+..+.+. .|+ .+-+.+-|=.+|.+--|-.|.+.-.. ..
T Consensus 59 g~~~~ldw~~~p~--~~~~P~vVl~HGL~G~s~s~y~-r~L-~~~~~~rg~~~Vv~~~Rgcs~~~n~~----------p~ 124 (345)
T COG0429 59 GGFIDLDWSEDPR--AAKKPLVVLFHGLEGSSNSPYA-RGL-MRALSRRGWLVVVFHFRGCSGEANTS----------PR 124 (345)
T ss_pred CCEEEEeeccCcc--ccCCceEEEEeccCCCCcCHHH-HHH-HHHHHhcCCeEEEEecccccCCcccC----------cc
Confidence 4555556666543 33466 7777787887655221 122 33456667888888889998764321 11
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhh-HHHHHHHHhCCC-eEEEEEecccccc
Q 038117 150 GYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGG-ELATWFRLKYPH-VVIGSLASSAPIL 213 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G-~LAaw~R~kYP~-~v~gavASSApv~ 213 (500)
-|-+-+- +|++.|+..+++... ..|..++|-|.|| |||-|+-.+==+ ...||++.|+|..
T Consensus 125 ~yh~G~t--~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 125 LYHSGET--EDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred eecccch--hHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 1211121 999999999998543 3799999999999 999998766544 3479999999974
No 84
>PLN02872 triacylglycerol lipase
Probab=94.22 E-value=0.19 Score=53.17 Aligned_cols=106 Identities=16% Similarity=0.085 Sum_probs=67.6
Q ss_pred CCcEEEEeCCCCCCCCccc---ccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQ---LSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~---~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
+.||+|+-|.....+.+.. ..++...+|+ .|--|+..+-|-+|.|..-..++. .+.+-++|---++|+.|+..+
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~-~GydV~l~n~RG~~~s~gh~~~~~--~~~~fw~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD-HGFDVWVGNVRGTRWSYGHVTLSE--KDKEFWDWSWQELALYDLAEM 150 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHh-CCCCcccccccccccccCCCCCCc--cchhccCCcHHHHHHHHHHHH
Confidence 3578888887655543321 1233344554 477899999998776643221110 012334554446777899999
Q ss_pred HHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCC
Q 038117 165 LLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPH 200 (500)
Q Consensus 165 i~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~ 200 (500)
++++.+.- ..|++++|+|.||+++. ....+|+
T Consensus 151 id~i~~~~---~~~v~~VGhS~Gg~~~~-~~~~~p~ 182 (395)
T PLN02872 151 IHYVYSIT---NSKIFIVGHSQGTIMSL-AALTQPN 182 (395)
T ss_pred HHHHHhcc---CCceEEEEECHHHHHHH-HHhhChH
Confidence 99987532 25899999999998885 4446776
No 85
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.22 E-value=0.054 Score=59.00 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=61.7
Q ss_pred HhHHhcCceEEEEeeeeeec-CCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCC-CCCCEEEeccChhhHH
Q 038117 113 ENAHQFKALIVILEHRYYGK-SVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNA-THAPVIAIGASYGGEL 190 (500)
Q Consensus 113 ~~A~~~gA~~v~lEHRyyG~-S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~-~~~pwI~~GGSY~G~L 190 (500)
..-...|-.||++..|---. -.-|... --.+|.+.-+ +|-++=.+.+..+++. +=.++.+-|-||||-|
T Consensus 670 ~~LaslGy~Vv~IDnRGS~hRGlkFE~~-----ik~kmGqVE~----eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYL 740 (867)
T KOG2281|consen 670 CRLASLGYVVVFIDNRGSAHRGLKFESH-----IKKKMGQVEV----EDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYL 740 (867)
T ss_pred hhhhhcceEEEEEcCCCccccchhhHHH-----HhhccCeeee----hhhHHHHHHHHHhcCcccchheeEeccccccHH
Confidence 44556799999999884211 1122211 0134555443 4555555555555543 3358999999999999
Q ss_pred HHHHHHhCCCeEEEEEecccccc
Q 038117 191 ATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 191 Aaw~R~kYP~~v~gavASSApv~ 213 (500)
|+-.-.+||++|..|||+.++-.
T Consensus 741 Slm~L~~~P~IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 741 SLMGLAQYPNIFRVAIAGAPVTD 763 (867)
T ss_pred HHHHhhcCcceeeEEeccCccee
Confidence 99999999999999999875543
No 86
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=94.21 E-value=0.048 Score=53.11 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=42.7
Q ss_pred HHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 163 SILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 163 ~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
+++..++++++....++.+.|.|.||..|.++..+||++|.++++-|+.+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 466777788775444499999999999999999999999999999996543
No 87
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=93.92 E-value=0.31 Score=49.92 Aligned_cols=100 Identities=17% Similarity=0.155 Sum_probs=73.3
Q ss_pred CCCCcEEEEeCCCCCCCCccc---ccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHH
Q 038117 86 GGNSPILAFLGAEAPIDDNIQ---LSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYA 162 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~~~---~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a 162 (500)
++++=|++..|+-.-.|.... ....+.++|++.+|+++..--|-+|.|. + ..|.++-..|..
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~--G-------------~~s~~dLv~~~~ 199 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST--G-------------PPSRKDLVKDYQ 199 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC--C-------------CCCHHHHHHHHH
Confidence 566667666666544454221 1245789999999999999999999984 2 235577888888
Q ss_pred HHHHHHhhhc-CCCCCCEEEeccChhhHHHHHHHHhCCC
Q 038117 163 SILLHIKDKY-NATHAPVIAIGASYGGELATWFRLKYPH 200 (500)
Q Consensus 163 ~fi~~~k~~~-~~~~~pwI~~GGSY~G~LAaw~R~kYP~ 200 (500)
.-+++++.+- +++-...|++|.|-||+.+|-.-.+.+.
T Consensus 200 a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 200 ACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred HHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 8889998643 3333469999999999999987666654
No 88
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=93.50 E-value=0.18 Score=50.11 Aligned_cols=113 Identities=17% Similarity=0.054 Sum_probs=73.5
Q ss_pred CCcEEEEeCCCCCCCCccc-cc------chHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQ-LS------GFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALAD 160 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~-~~------g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD 160 (500)
.-|++|...+.+-...... .. ........+.|-.+|....|-.|.|- + .+..+ .++-..|
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~--G----------~~~~~-~~~e~~D 85 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE--G----------EFDPM-SPNEAQD 85 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S-----------B-TT-SHHHHHH
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC--C----------ccccC-ChhHHHH
Confidence 3689999988874321110 00 01111255679999999999999985 2 11222 6777899
Q ss_pred HHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 161 YASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 161 ~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
.+..|+.+.++ .-.+.+|-++|.||+|..+-.....-|.-..|.++.+++...
T Consensus 86 ~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 86 GYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred HHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 99999999877 434568999999999999988888555556666666665543
No 89
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=93.33 E-value=0.59 Score=45.41 Aligned_cols=54 Identities=22% Similarity=0.155 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhc---CCCCCCEEEeccChhhHHHHHHHHhCC---CeEEEEEeccccccc
Q 038117 161 YASILLHIKDKY---NATHAPVIAIGASYGGELATWFRLKYP---HVVIGSLASSAPILY 214 (500)
Q Consensus 161 ~a~fi~~~k~~~---~~~~~pwI~~GGSY~G~LAaw~R~kYP---~~v~gavASSApv~a 214 (500)
+++.++.+.+.+ ..+..++|++|+|.||.+|-.+-...+ +.+.+-+.=+.|...
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 344445554444 235678999999999998887766554 578899998889864
No 90
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=93.12 E-value=0.39 Score=50.44 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=23.8
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeee
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYY 130 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyy 130 (500)
-||+++.-|=+.. +..++.+..+||.. |..|+++|||+-
T Consensus 100 ~PvvIFSHGlgg~--R~~yS~~~~eLAS~-GyVV~aieHrDg 138 (379)
T PF03403_consen 100 FPVVIFSHGLGGS--RTSYSAICGELASH-GYVVAAIEHRDG 138 (379)
T ss_dssp EEEEEEE--TT----TTTTHHHHHHHHHT-T-EEEEE---SS
T ss_pred CCEEEEeCCCCcc--hhhHHHHHHHHHhC-CeEEEEeccCCC
Confidence 5899999886543 23345677899886 999999999974
No 91
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=92.96 E-value=0.14 Score=52.71 Aligned_cols=68 Identities=19% Similarity=0.293 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCE-EEeccChhhHHHHHHHHhCCCeEE--EEEecccccccccCCCCcchhhHHHHHhh
Q 038117 158 LADYASILLHIKDKYNATHAPV-IAIGASYGGELATWFRLKYPHVVI--GSLASSAPILYYGDITPWTTYHSVVSKDF 232 (500)
Q Consensus 158 LaD~a~fi~~~k~~~~~~~~pw-I~~GGSY~G~LAaw~R~kYP~~v~--gavASSApv~a~~~~~~~~~y~~~v~~~~ 232 (500)
+.|.++..+.+-..++- .++ .++|||+|||.|-=.-..||+.|. ..+|+++.+.+.. -.|.+.-.+.+
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~-----ia~~~~~r~AI 199 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQN-----IAFNEVQRQAI 199 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHH-----HHHHHHHHHHH
Confidence 56777776666555553 244 489999999999888889999987 5677877775542 24455444443
No 92
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=92.95 E-value=0.51 Score=49.42 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=56.0
Q ss_pred CceEEEEeeee--eecCCCCCCchhhccc-cccccCCCHHHHHHHHHHHHHHHhhhcCCCCCC-EEEeccChhhHHHHHH
Q 038117 119 KALIVILEHRY--YGKSVPFGSRKAALKN-ARHRGYFNSAQALADYASILLHIKDKYNATHAP-VIAIGASYGGELATWF 194 (500)
Q Consensus 119 gA~~v~lEHRy--yG~S~P~~~~~~~~~s-~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~p-wI~~GGSY~G~LAaw~ 194 (500)
+--||++..|- .|.|.|-......... ..+..-.|.+.-.+|+..|++.+.- .+ .+++|.|+||++|..+
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~~ 164 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALEW 164 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHHH
Confidence 45789999875 4444442100000000 0011135788877888888876542 35 5899999999999999
Q ss_pred HHhCCCeEEEEEecccc
Q 038117 195 RLKYPHVVIGSLASSAP 211 (500)
Q Consensus 195 R~kYP~~v~gavASSAp 211 (500)
..+||+.+.+.+.-++.
T Consensus 165 a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 165 AIDYPDRVRSALVIASS 181 (379)
T ss_pred HHhChHhhhEEEEECCC
Confidence 99999998877765543
No 93
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=92.94 E-value=0.51 Score=48.14 Aligned_cols=122 Identities=16% Similarity=0.202 Sum_probs=74.6
Q ss_pred EeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCC--CCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhh
Q 038117 94 FLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSV--PFGSRKAALKNARHRGYFNSAQALADYASILLHIKDK 171 (500)
Q Consensus 94 ~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~--P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~ 171 (500)
.|+-||.+.-+. -|.|... .+.|-.++-+.|--|+.|. |++. +...|+.-++.|.- +.
T Consensus 246 vIC~EGNAGFYE--vG~m~tP-~~lgYsvLGwNhPGFagSTG~P~p~--------------n~~nA~DaVvQfAI---~~ 305 (517)
T KOG1553|consen 246 VICFEGNAGFYE--VGVMNTP-AQLGYSVLGWNHPGFAGSTGLPYPV--------------NTLNAADAVVQFAI---QV 305 (517)
T ss_pred EEEecCCccceE--eeeecCh-HHhCceeeccCCCCccccCCCCCcc--------------cchHHHHHHHHHHH---HH
Confidence 344455543221 1444444 4579999999999999886 5552 12234333344533 34
Q ss_pred cCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccccccCCCCcchhhHHHHHhhhcCChHHHHHHHHHHHH
Q 038117 172 YNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILYYGDITPWTTYHSVVSKDFRDTSEECFQTIKKSWSE 249 (500)
Q Consensus 172 ~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~ 249 (500)
++.+..-.|++|-|-||.-++|....||++ +|+|+. ..|++.+--.+..++..-+..++.+++.
T Consensus 306 Lgf~~edIilygWSIGGF~~~waAs~YPdV-------kavvLD-------AtFDDllpLAl~rMP~~~~giV~~aiRn 369 (517)
T KOG1553|consen 306 LGFRQEDIILYGWSIGGFPVAWAASNYPDV-------KAVVLD-------ATFDDLLPLALFRMPTFFSGIVEHAIRN 369 (517)
T ss_pred cCCCccceEEEEeecCCchHHHHhhcCCCc-------eEEEee-------cchhhhhhHHhhhchHHHHHHHHHHHHH
Confidence 454445699999999999999999999996 455542 2455555555555555555555554433
No 94
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.47 E-value=1.8 Score=46.30 Aligned_cols=84 Identities=17% Similarity=0.123 Sum_probs=49.1
Q ss_pred ceEEEEe-eeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhhH----HHHH
Q 038117 120 ALIVILE-HRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYN-ATHAPVIAIGASYGGE----LATW 193 (500)
Q Consensus 120 A~~v~lE-HRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G~----LAaw 193 (500)
|.+|++| -=--|-|.... .-.+.+-+++++|+..|++.+=+.+. ..+.|+.++|-||||. ||..
T Consensus 116 anllfiDqPvGtGfSy~~~----------~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKT----------PIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred CcEEEecCCCCCCccCCCC----------CCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 7888888 44456564321 11233333344899998887654443 2567999999999997 5555
Q ss_pred HHHhC------CCeEEEEEecccccc
Q 038117 194 FRLKY------PHVVIGSLASSAPIL 213 (500)
Q Consensus 194 ~R~kY------P~~v~gavASSApv~ 213 (500)
+-..- +=-..|..-+.+.+.
T Consensus 186 i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 186 ISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHhhcccccCCcccceeeEecCCCcC
Confidence 53322 113445555555443
No 95
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.29 E-value=0.46 Score=48.75 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=62.2
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCC-C-CCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSV-P-FGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~-P-~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
-|+ +++-|.|...+.+.. -+..+|+ +=.|.++.-=-||.|. | |+. + ..+.+- .|++
T Consensus 91 ~pl-VliHGyGAg~g~f~~--Nf~~La~--~~~vyaiDllG~G~SSRP~F~~--------d---~~~~e~------~fve 148 (365)
T KOG4409|consen 91 TPL-VLIHGYGAGLGLFFR--NFDDLAK--IRNVYAIDLLGFGRSSRPKFSI--------D---PTTAEK------EFVE 148 (365)
T ss_pred CcE-EEEeccchhHHHHHH--hhhhhhh--cCceEEecccCCCCCCCCCCCC--------C---cccchH------HHHH
Confidence 455 455566654433211 1345788 5667888888899754 5 221 1 112111 5665
Q ss_pred HHh---hhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEE-EEEecccccc
Q 038117 167 HIK---DKYNATHAPVIAIGASYGGELATWFRLKYPHVVI-GSLASSAPIL 213 (500)
Q Consensus 167 ~~k---~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~-gavASSApv~ 213 (500)
.+. .+.+. .+-|++|+|+||-||+=..+|||+-|. =-++|.+-+.
T Consensus 149 siE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 149 SIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFP 197 (365)
T ss_pred HHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccc
Confidence 554 33343 389999999999999999999998665 3445555543
No 96
>PRK13604 luxD acyl transferase; Provisional
Probab=91.26 E-value=1.2 Score=45.41 Aligned_cols=126 Identities=12% Similarity=-0.045 Sum_probs=76.3
Q ss_pred ecCCCCCCCCCCCceeeEEEEeccc-cCCCCCcEEEEeCCCCCCCCcccccchHHHhHH---hcCceEEEEeeeee-ecC
Q 038117 59 TIDHFSYGPESYQTFPQRYVINSKF-WGGGNSPILAFLGAEAPIDDNIQLSGFTYENAH---QFKALIVILEHRYY-GKS 133 (500)
Q Consensus 59 ~lDHf~~~~~~~~TF~QRY~~n~~~-~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~---~~gA~~v~lEHRyy-G~S 133 (500)
++||-=. ..+--..|=|+..-- -..+..|++++..|-+.-. ..+..+|+ +.|-.++...+|-- |+|
T Consensus 9 ~~~~~~~---~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~------~~~~~~A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 9 TIDHVIC---LENGQSIRVWETLPKENSPKKNNTILIASGFARRM------DHFAGLAEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred chhheEE---cCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCCh------HHHHHHHHHHHHCCCEEEEecCCCCCCCC
Confidence 5777531 223444555555431 0022346777777765421 12333433 56999999999875 999
Q ss_pred CCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 134 VPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 134 ~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
- ++ ++..|+.-...|+...++++++.. ..+++++|.|.||+.|.-.....| +.+.++-|+
T Consensus 80 ~--G~----------~~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp 139 (307)
T PRK13604 80 S--GT----------IDEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAVG 139 (307)
T ss_pred C--Cc----------cccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCC
Confidence 3 32 222333334799988889998752 247999999999999866665555 555444443
No 97
>PRK11071 esterase YqiA; Provisional
Probab=91.00 E-value=1 Score=42.41 Aligned_cols=39 Identities=28% Similarity=0.431 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCC
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPH 200 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~ 200 (500)
++.+++..+++. +. ..+++++|.|.||.+|..+..++|.
T Consensus 46 ~~~~~l~~l~~~----~~--~~~~~lvG~S~Gg~~a~~~a~~~~~ 84 (190)
T PRK11071 46 DAAELLESLVLE----HG--GDPLGLVGSSLGGYYATWLSQCFML 84 (190)
T ss_pred HHHHHHHHHHHH----cC--CCCeEEEEECHHHHHHHHHHHHcCC
Confidence 345555555543 22 2489999999999999999999994
No 98
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=90.55 E-value=1.2 Score=46.89 Aligned_cols=141 Identities=23% Similarity=0.274 Sum_probs=87.8
Q ss_pred EeecCCCCCCCCCCCceeeEEEEeccc-------cC----C------CCCcEEEEeCCCCCCCCcccccchHHHhHHhcC
Q 038117 57 NQTIDHFSYGPESYQTFPQRYVINSKF-------WG----G------GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFK 119 (500)
Q Consensus 57 ~Q~lDHf~~~~~~~~TF~QRY~~n~~~-------~~----~------~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~g 119 (500)
-|.+.|.-... ...-+-+|-++..+. |- . ...|+++++.|=...+... .--.+...|++-|
T Consensus 77 lQT~~~~~~~~-~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~-YVr~lv~~a~~~G 154 (409)
T KOG1838|consen 77 LQTLLLSFFGS-KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHES-YVRHLVHEAQRKG 154 (409)
T ss_pred eeeeehhhcCC-CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhH-HHHHHHHHHHhCC
Confidence 57777754321 224556676664432 10 1 2349999988854322210 0012345689999
Q ss_pred ceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHH-HHHHhC
Q 038117 120 ALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELAT-WFRLKY 198 (500)
Q Consensus 120 A~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAa-w~R~kY 198 (500)
=-+|.+-||--|.|.-+. +.-..+-. -.|+..+++++++.+. ++|-.++|-|+||++-. ++-+.=
T Consensus 155 ~r~VVfN~RG~~g~~LtT--------pr~f~ag~----t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g 220 (409)
T KOG1838|consen 155 YRVVVFNHRGLGGSKLTT--------PRLFTAGW----TEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEG 220 (409)
T ss_pred cEEEEECCCCCCCCccCC--------CceeecCC----HHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhcc
Confidence 999999999988875433 21112222 3799999999999875 47999999999998754 333433
Q ss_pred CCe-EEEEEecccccc
Q 038117 199 PHV-VIGSLASSAPIL 213 (500)
Q Consensus 199 P~~-v~gavASSApv~ 213 (500)
.+. ..||+|=|.|..
T Consensus 221 ~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 221 DNTPLIAAVAVCNPWD 236 (409)
T ss_pred CCCCceeEEEEeccch
Confidence 333 556666666653
No 99
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=89.70 E-value=1.8 Score=47.88 Aligned_cols=144 Identities=19% Similarity=0.303 Sum_probs=93.4
Q ss_pred eeEEEeecCC-CCCCCCCCCceeeEEEEecc---------ccC-----CCCCcEEEEeCCCCCCCCcccccchHH-HhHH
Q 038117 53 TFFYNQTIDH-FSYGPESYQTFPQRYVINSK---------FWG-----GGNSPILAFLGAEAPIDDNIQLSGFTY-ENAH 116 (500)
Q Consensus 53 ~~~f~Q~lDH-f~~~~~~~~TF~QRY~~n~~---------~~~-----~~ggPIfl~~gGE~~~~~~~~~~g~~~-~~A~ 116 (500)
+.-.+|+|=- || |. ..+.+|-|+... +|+ ...+|++||-=|--.++- ...|.. .+.=
T Consensus 401 ~~LkqqeV~~g~d--p~--~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~---~p~Fs~~~lSL 473 (682)
T COG1770 401 TLLKQQEVPGGFD--PE--DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISM---DPSFSIARLSL 473 (682)
T ss_pred EEEEeccCCCCCC--hh--HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccC---CcCcccceeee
Confidence 3456777744 77 54 799999999721 222 234788888644322211 112221 1122
Q ss_pred hcCceEEEEee-eeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhh-cCCCCCCEEEeccChhhHHHHHH
Q 038117 117 QFKALIVILEH-RYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDK-YNATHAPVIAIGASYGGELATWF 194 (500)
Q Consensus 117 ~~gA~~v~lEH-RyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~-~~~~~~pwI~~GGSY~G~LAaw~ 194 (500)
.=-|.|+++-| |- |.-+=.. --++=|.|+-.+...|+-.-.+++.+. ++ .....++.|||-||||..-.
T Consensus 474 lDRGfiyAIAHVRG-GgelG~~-------WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~-~~~~i~a~GGSAGGmLmGav 544 (682)
T COG1770 474 LDRGFVYAIAHVRG-GGELGRA-------WYEDGKLLNKKNTFTDFIAAARHLVKEGYT-SPDRIVAIGGSAGGMLMGAV 544 (682)
T ss_pred ecCceEEEEEEeec-ccccChH-------HHHhhhhhhccccHHHHHHHHHHHHHcCcC-CccceEEeccCchhHHHHHH
Confidence 22478888888 43 3222111 125557888889999987777777654 44 33469999999999999999
Q ss_pred HHhCCCeEEEEEeccccc
Q 038117 195 RLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 195 R~kYP~~v~gavASSApv 212 (500)
...=|++|.|+||-+.-|
T Consensus 545 ~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 545 ANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred HhhChhhhhheeecCCcc
Confidence 999999999999988554
No 100
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=89.69 E-value=0.94 Score=51.92 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=75.2
Q ss_pred CCcEEEE-eCCCCCCCCc-ccccchHHHhHHhcCceEEEEeeeee---ecCCCCCCchhhccccccccCCCHHHHHHHHH
Q 038117 88 NSPILAF-LGAEAPIDDN-IQLSGFTYENAHQFKALIVILEHRYY---GKSVPFGSRKAALKNARHRGYFNSAQALADYA 162 (500)
Q Consensus 88 ggPIfl~-~gGE~~~~~~-~~~~g~~~~~A~~~gA~~v~lEHRyy---G~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a 162 (500)
.=|+++. -||.++..-. ....++..-++-..|.+++.+.-|.= |...... -..+|..- =..|..
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~-------~~~~lG~~----ev~D~~ 593 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSA-------LPRNLGDV----EVKDQI 593 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHH-------hhhhcCCc----chHHHH
Confidence 3465554 4555422111 01124445578899999999999954 3333322 11333332 245666
Q ss_pred HHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 163 SILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 163 ~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
.-++.+.+..-.+..++.++|+||||-|++++-.++|+.+.++=++-|||-.
T Consensus 594 ~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 594 EAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred HHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 6666666555556679999999999999999999999666666678889853
No 101
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.69 E-value=2.7 Score=41.51 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=85.7
Q ss_pred CCCceeeEEEEeccccCCCCCcEEEEeCCC-CCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccc
Q 038117 69 SYQTFPQRYVINSKFWGGGNSPILAFLGAE-APIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNAR 147 (500)
Q Consensus 69 ~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE-~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~ 147 (500)
+.+.=-+++++...-. ..+++||..|- .+.. ...-+..+++..+|-.++...-|-||.|.=.+. ..
T Consensus 43 ~rgn~~~~~y~~~~~~---~~~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps-------E~ 109 (258)
T KOG1552|consen 43 SRGNEIVCMYVRPPEA---AHPTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS-------ER 109 (258)
T ss_pred CCCCEEEEEEEcCccc---cceEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCcc-------cc
Confidence 4455556677666422 35889998886 2222 112344567888899999999999999975441 12
Q ss_pred cccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 148 HRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 148 nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
.-.+|+....+.+++.++ ++.++|++|-|-|-.-+.-...++| ..|-|-=|
T Consensus 110 --------n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 110 --------NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred --------cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEec
Confidence 456899999999999998 7789999999999999999999999 44444433
No 102
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=89.52 E-value=0.43 Score=50.38 Aligned_cols=51 Identities=20% Similarity=0.312 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCE-EEeccChhhHHHHHHHHhCCCeEEEEEec
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPV-IAIGASYGGELATWFRLKYPHVVIGSLAS 208 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pw-I~~GGSY~G~LAaw~R~kYP~~v~gavAS 208 (500)
.|+++-.+|++.+++.+. . .++ +++|+|+||+.|-.+..+||+.+.+.+.-
T Consensus 141 ~t~~d~~~~~~~ll~~lg----i--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 141 VTILDFVRVQKELIKSLG----I--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CcHHHHHHHHHHHHHHcC----C--CCceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 788888888888876543 2 355 59999999999999999999999876654
No 103
>COG4099 Predicted peptidase [General function prediction only]
Probab=88.83 E-value=1.6 Score=43.95 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=44.4
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 150 GYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
+-+..-|++-|+.. +.+...|+-+.++.-++|-|-||+.+-.+-+||||.|.||+-=+
T Consensus 244 ~t~~~l~~~idli~--~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 244 KTLLYLIEKIDLIL--EVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred ccchhHHHHHHHHH--HHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 33444566666543 13456788888999999999999999999999999999987433
No 104
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.12 E-value=5.3 Score=39.07 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccc
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSA 210 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSA 210 (500)
.+..+.++|+...+.++++.-.....++.++|=|+||.+|.-+--+.| .+.|+++--.
T Consensus 87 ~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg 144 (236)
T COG0412 87 VDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYG 144 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecC
Confidence 444899999999999999765344568999999999999999999999 6666665443
No 105
>COG0400 Predicted esterase [General function prediction only]
Probab=88.11 E-value=0.93 Score=43.54 Aligned_cols=56 Identities=23% Similarity=0.379 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 157 ALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 157 ALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
..+.++.|++.....+..+..+.|.+|-|=|+++++-.-.++|+.+.++++-|+-+
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 33444567666667788777899999999999999999999999999999888654
No 106
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=88.02 E-value=0.63 Score=49.84 Aligned_cols=47 Identities=19% Similarity=0.151 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeE
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVV 202 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v 202 (500)
.++.++|++.+++.+.+.++ ..|++++|+|.||.++..|-..+|+.+
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~~~ 187 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSDVF 187 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCHhH
Confidence 46778999999998876654 369999999999999999999999754
No 107
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=88.01 E-value=1 Score=43.75 Aligned_cols=49 Identities=22% Similarity=0.318 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCC----CeEEEEEecccc
Q 038117 160 DYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYP----HVVIGSLASSAP 211 (500)
Q Consensus 160 D~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP----~~v~gavASSAp 211 (500)
..+.+++.+.+.+. .++++.|+|.||+||.+.-..-+ +-+..+++--||
T Consensus 70 ~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 33456666665554 36999999999999999988744 345666666666
No 108
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=87.52 E-value=1.5 Score=47.49 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=65.5
Q ss_pred CcEEEEeCCCCCCCCccc-ccchHHHhHHhcCceEEEEeeee--eec-CCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQ-LSGFTYENAHQFKALIVILEHRY--YGK-SVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~-~~g~~~~~A~~~gA~~v~lEHRy--yG~-S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
-||++++=|-+-..+... .......++.+-+.++|.+-+|= ||- +.+.. + .+ +--.+|-|...-
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~--~-----~~-----~gN~Gl~Dq~~A 192 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDL--D-----AP-----SGNYGLLDQRLA 192 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSST--T-----SH-----BSTHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccccccccc--c-----cC-----chhhhhhhhHHH
Confidence 599999955443333221 11223467788899999999993 221 11111 0 01 345677887776
Q ss_pred HHHHhhh---cCCCCCCEEEeccChhhHHHHHHHHhCC---CeEEEEEeccccccc
Q 038117 165 LLHIKDK---YNATHAPVIAIGASYGGELATWFRLKYP---HVVIGSLASSAPILY 214 (500)
Q Consensus 165 i~~~k~~---~~~~~~pwI~~GGSY~G~LAaw~R~kYP---~~v~gavASSApv~a 214 (500)
+++++++ .+.+-..|.++|.|-||+.+..+-.- | .+|..||.-|+....
T Consensus 193 L~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 193 LKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--TTS
T ss_pred HHHHHhhhhhcccCCcceeeeeecccccccceeeec-ccccccccccccccccccc
Confidence 7777765 34444579999999666666655544 6 599999999996543
No 109
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=86.96 E-value=3.8 Score=45.09 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=65.0
Q ss_pred CCcEEEEeCCCCCCCCccc-----ccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQ-----LSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYA 162 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~-----~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a 162 (500)
..||++.-|- +..++. ..+++..++++ |--++.+..|-+|.|...- .+. +-+..++.
T Consensus 188 ~~PlLiVp~~---i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~----------~~d----dY~~~~i~ 249 (532)
T TIGR01838 188 KTPLLIVPPW---INKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADK----------TFD----DYIRDGVI 249 (532)
T ss_pred CCcEEEECcc---cccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccC----------Chh----hhHHHHHH
Confidence 4677666552 333221 23555555554 7889999999999774211 111 23334455
Q ss_pred HHHHHHhhhcCCCCCCEEEeccChhhHHH----HHHHHh-CCCeEEEEEeccccc
Q 038117 163 SILLHIKDKYNATHAPVIAIGASYGGELA----TWFRLK-YPHVVIGSLASSAPI 212 (500)
Q Consensus 163 ~fi~~~k~~~~~~~~pwI~~GGSY~G~LA----aw~R~k-YP~~v~gavASSApv 212 (500)
..+..+.+..+ ..|++++|.|.||+++ +++... +|+.+.+.+--.+|+
T Consensus 250 ~al~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 250 AALEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred HHHHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 55666654433 3579999999999985 444444 588888777777775
No 110
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.93 E-value=2.3 Score=43.71 Aligned_cols=30 Identities=33% Similarity=0.427 Sum_probs=28.2
Q ss_pred CCEEEeccChhhHHHHHHHHhCCCeEEEEE
Q 038117 177 APVIAIGASYGGELATWFRLKYPHVVIGSL 206 (500)
Q Consensus 177 ~pwI~~GGSY~G~LAaw~R~kYP~~v~gav 206 (500)
.|++++|.||||.+|--+...||+.|.+-+
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 579999999999999999999999999876
No 111
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=86.15 E-value=0.9 Score=45.03 Aligned_cols=47 Identities=23% Similarity=0.361 Sum_probs=40.1
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
+.+.|..+..+-.++|+||||..+...-++||+.|.-.++.|.-+..
T Consensus 128 Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 128 IEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred HhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 34557766678999999999999999999999999999999877654
No 112
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.05 E-value=0.63 Score=45.46 Aligned_cols=59 Identities=22% Similarity=0.162 Sum_probs=36.2
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH-----hCCCeEEEEEeccccc
Q 038117 150 GYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL-----KYPHVVIGSLASSAPI 212 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~-----kYP~~v~gavASSApv 212 (500)
-.+|.-++|+|.. ...++. ...+.||..||+|+||+||==..+ ..|=...=..+++||.
T Consensus 51 p~~~di~~Lad~l--a~el~~--~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~ 114 (244)
T COG3208 51 PLLTDIESLADEL--ANELLP--PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPH 114 (244)
T ss_pred cccccHHHHHHHH--HHHhcc--ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCC
Confidence 4566667777732 222332 235689999999999999854433 3442222334778883
No 113
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.91 E-value=1.2 Score=42.45 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
++++=+..||....+. ..+..++++.|-|=||++|..+-..+|+.+.|+++=|+.+.
T Consensus 85 ~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 3333444555544433 34556899999999999999999999999999999888764
No 114
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=85.75 E-value=2 Score=40.23 Aligned_cols=59 Identities=17% Similarity=0.136 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEE-EEecccccc
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIG-SLASSAPIL 213 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~g-avASSApv~ 213 (500)
.+.+-.+|+.|.+-+.... .++....++|+|||..++...-+.-+..++- .+.+|+-+.
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4677788999999998766 5567899999999999999998775555553 344554443
No 115
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=85.08 E-value=6.7 Score=39.05 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=71.3
Q ss_pred cEEEEeCC-CCCCCCcccccchHHHhHHhc--CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 90 PILAFLGA-EAPIDDNIQLSGFTYENAHQF--KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 90 PIfl~~gG-E~~~~~~~~~~g~~~~~A~~~--gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
++|++++| -|-++ ++ ..|+..|-+.+ +..|+.+-|.-+-.+..... ...+-+..+.++=++=...|++
T Consensus 3 ~li~~IPGNPGlv~-fY--~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~------~~~~~~~~sL~~QI~hk~~~i~ 73 (266)
T PF10230_consen 3 PLIVFIPGNPGLVE-FY--EEFLSALYEKLNPQFEILGISHAGHSTSPSNSK------FSPNGRLFSLQDQIEHKIDFIK 73 (266)
T ss_pred EEEEEECCCCChHH-HH--HHHHHHHHHhCCCCCeeEEecCCCCcCCccccc------ccCCCCccCHHHHHHHHHHHHH
Confidence 55555555 44333 32 25777777774 67888888886655443211 0135678888888887788888
Q ss_pred HHhhhcCCCCCCEEEeccChhhHHHHHHHHhCC
Q 038117 167 HIKDKYNATHAPVIAIGASYGGELATWFRLKYP 199 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP 199 (500)
.+......++.|+|++|+|-|.-++.=+-.++|
T Consensus 74 ~~~~~~~~~~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 74 ELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred HHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc
Confidence 777655446789999999999999999999999
No 116
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=84.81 E-value=4.1 Score=46.93 Aligned_cols=86 Identities=13% Similarity=-0.003 Sum_probs=62.6
Q ss_pred HhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcC------------C--CCCC
Q 038117 113 ENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYN------------A--THAP 178 (500)
Q Consensus 113 ~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~------------~--~~~p 178 (500)
++--+.|-++|....|-.|.|--.- .-+ ..+-..|....|+++..... . .+.+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~------------~~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGk 339 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCP------------TTG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGK 339 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcC------------ccC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCe
Confidence 4444459999999999999986422 011 14556788888888874311 0 2579
Q ss_pred EEEeccChhhHHHHHHHHhCCCeEEEEEecccc
Q 038117 179 VIAIGASYGGELATWFRLKYPHVVIGSLASSAP 211 (500)
Q Consensus 179 wI~~GGSY~G~LAaw~R~kYP~~v~gavASSAp 211 (500)
+.++|.||+|.++.+.....|.-..+.|+.+|.
T Consensus 340 VGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 340 VAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred eEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 999999999999999998888888888775544
No 117
>COG1647 Esterase/lipase [General function prediction only]
Probab=84.13 E-value=11 Score=36.62 Aligned_cols=81 Identities=19% Similarity=0.172 Sum_probs=55.6
Q ss_pred CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhh-cCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 119 KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDK-YNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 119 gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~-~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
|=.+.+ -||=|.-.|-. .+---|.+-=+.|..---+++++. | .-+-+.|-|.||.+|.|+...
T Consensus 42 GyTv~a--P~ypGHG~~~e----------~fl~t~~~DW~~~v~d~Y~~L~~~gy----~eI~v~GlSmGGv~alkla~~ 105 (243)
T COG1647 42 GYTVYA--PRYPGHGTLPE----------DFLKTTPRDWWEDVEDGYRDLKEAGY----DEIAVVGLSMGGVFALKLAYH 105 (243)
T ss_pred CceEec--CCCCCCCCCHH----------HHhcCCHHHHHHHHHHHHHHHHHcCC----CeEEEEeecchhHHHHHHHhh
Confidence 444444 46666655522 222335555566665555556632 3 357788889999999999999
Q ss_pred CCCeEEEEEecccccccccC
Q 038117 198 YPHVVIGSLASSAPILYYGD 217 (500)
Q Consensus 198 YP~~v~gavASSApv~a~~~ 217 (500)
|| +.+.+.=|||+..+..
T Consensus 106 ~p--~K~iv~m~a~~~~k~~ 123 (243)
T COG1647 106 YP--PKKIVPMCAPVNVKSW 123 (243)
T ss_pred CC--ccceeeecCCcccccc
Confidence 99 8999999999987654
No 118
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.79 E-value=1.6 Score=41.25 Aligned_cols=43 Identities=28% Similarity=0.424 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCC
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPH 200 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~ 200 (500)
...++|++.+...|+..+. ..|+++|-|.||..|+|+..+|+-
T Consensus 40 ~~p~~a~~~l~~~i~~~~~------~~~~liGSSlGG~~A~~La~~~~~ 82 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKP------ENVVLIGSSLGGFYATYLAERYGL 82 (187)
T ss_pred cCHHHHHHHHHHHHHhCCC------CCeEEEEEChHHHHHHHHHHHhCC
Confidence 3567787776666554432 239999999999999999999963
No 119
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=83.42 E-value=1.6 Score=46.15 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=78.1
Q ss_pred CceeeEEEeecCCCCCCCCCCCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeee
Q 038117 50 GFETFFYNQTIDHFSYGPESYQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRY 129 (500)
Q Consensus 50 ~~~~~~f~Q~lDHf~~~~~~~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRy 129 (500)
++....++-|.++ ++..- |+.--+ .+...|++|++||-....... .....+.....|-.++.+|.=-
T Consensus 162 ~~~i~~v~iP~eg--------~~I~g-~LhlP~--~~~p~P~VIv~gGlDs~qeD~--~~l~~~~l~~rGiA~LtvDmPG 228 (411)
T PF06500_consen 162 DYPIEEVEIPFEG--------KTIPG-YLHLPS--GEKPYPTVIVCGGLDSLQEDL--YRLFRDYLAPRGIAMLTVDMPG 228 (411)
T ss_dssp SSEEEEEEEEETT--------CEEEE-EEEESS--SSS-EEEEEEE--TTS-GGGG--HHHHHCCCHHCT-EEEEE--TT
T ss_pred CCCcEEEEEeeCC--------cEEEE-EEEcCC--CCCCCCEEEEeCCcchhHHHH--HHHHHHHHHhCCCEEEEEccCC
Confidence 3455566666654 22222 443333 244579999999965543211 1223355667899999999988
Q ss_pred eecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 130 YGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 130 yG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
-|.|.-.+ + + ++ +=...|++-|. +...--.+..++.++|-|.||..|.-.....|+-+.|.++-.
T Consensus 229 ~G~s~~~~-l-----~-~D--~~~l~~aVLd~------L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~G 293 (411)
T PF06500_consen 229 QGESPKWP-L-----T-QD--SSRLHQAVLDY------LASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALG 293 (411)
T ss_dssp SGGGTTT--S-------S---CCHHHHHHHHH------HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES
T ss_pred CcccccCC-C-----C-cC--HHHHHHHHHHH------HhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeC
Confidence 88873211 1 1 22 12345665543 322111234689999999999999999999999999999999
Q ss_pred cccccc
Q 038117 210 APILYY 215 (500)
Q Consensus 210 Apv~a~ 215 (500)
|||..+
T Consensus 294 a~vh~~ 299 (411)
T PF06500_consen 294 APVHHF 299 (411)
T ss_dssp ---SCG
T ss_pred chHhhh
Confidence 998754
No 120
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=83.27 E-value=2.4 Score=40.67 Aligned_cols=39 Identities=26% Similarity=0.335 Sum_probs=29.8
Q ss_pred CCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 175 THAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
...++.++|.|.||-||-.+.-+|| .+.+.|+.|.+...
T Consensus 20 ~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 20 DPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp --SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 3468999999999999999999999 77777776666543
No 121
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.17 E-value=1.7 Score=38.14 Aligned_cols=43 Identities=23% Similarity=0.365 Sum_probs=26.3
Q ss_pred HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCC------eEEEEEeccccc
Q 038117 168 IKDKYNATHAPVIAIGASYGGELATWFRLKYPH------VVIGSLASSAPI 212 (500)
Q Consensus 168 ~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~------~v~gavASSApv 212 (500)
+.+++. +.+++++|+|-||+||.-+...+-+ ...-.++..+|-
T Consensus 57 ~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 57 LVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp HHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred HHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 334444 4689999999999998776654332 334445555553
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=83.02 E-value=15 Score=35.30 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=59.7
Q ss_pred CCcEEEEe-CCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 88 NSPILAFL-GAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 88 ggPIfl~~-gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
..|+|+++ ||.+-+.... .+--+...|.+.|-.++.+- ||-+ + +--|.+|-+.|..+++.
T Consensus 66 ~~klfIfIHGGYW~~g~rk-~clsiv~~a~~~gY~vasvg---Y~l~------------~---q~htL~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRK-MCLSIVGPAVRRGYRVASVG---YNLC------------P---QVHTLEQTMTQFTHGVN 126 (270)
T ss_pred CccEEEEEecchhhcCchh-cccchhhhhhhcCeEEEEec---cCcC------------c---ccccHHHHHHHHHHHHH
Confidence 46777665 6665443221 12234566777776666542 3322 1 23688999999999988
Q ss_pred HHhhhcCCCCCCEEEecc-ChhhHHHH--HHHHhCCCeEEEEEecc
Q 038117 167 HIKDKYNATHAPVIAIGA-SYGGELAT--WFRLKYPHVVIGSLASS 209 (500)
Q Consensus 167 ~~k~~~~~~~~pwI~~GG-SY~G~LAa--w~R~kYP~~v~gavASS 209 (500)
.+-+.+ ++.++|+||| |-|.-||+ -+|+.-|- ++|++-++
T Consensus 127 filk~~--~n~k~l~~gGHSaGAHLa~qav~R~r~pr-I~gl~l~~ 169 (270)
T KOG4627|consen 127 FILKYT--ENTKVLTFGGHSAGAHLAAQAVMRQRSPR-IWGLILLC 169 (270)
T ss_pred HHHHhc--ccceeEEEcccchHHHHHHHHHHHhcCch-HHHHHHHh
Confidence 876554 3467788887 77777775 45555443 34433333
No 123
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=82.87 E-value=3.8 Score=42.03 Aligned_cols=117 Identities=14% Similarity=0.055 Sum_probs=62.9
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCC-Cchhh-c-----ccccc-ccCCCHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFG-SRKAA-L-----KNARH-RGYFNSAQALA 159 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~-~~~~~-~-----~s~~n-l~yLt~~QALa 159 (500)
.-|+++..-|.+....... -...+| ..|..++.++=|-.|...+-. ..... . ...++ -.-+=-...+.
T Consensus 82 ~~Pavv~~hGyg~~~~~~~---~~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~ 157 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPF---DLLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYL 157 (320)
T ss_dssp SEEEEEEE--TT--GGGHH---HHHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcc---cccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHH
Confidence 4688888777765432110 112234 558899999999887322211 00000 0 00000 11111235678
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 160 DYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 160 D~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
|..+-+..++..-.-+..++.++|+|-||.||.+..-..|. |.++++..
T Consensus 158 D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~v 206 (320)
T PF05448_consen 158 DAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADV 206 (320)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEES
T ss_pred HHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecC
Confidence 88888887775432244689999999999999999999998 55555544
No 124
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.06 E-value=2.6 Score=37.87 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=27.5
Q ss_pred CCCCEEEeccChhhHHHHHHHHhCCC----eEEEEEeccccc
Q 038117 175 THAPVIAIGASYGGELATWFRLKYPH----VVIGSLASSAPI 212 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R~kYP~----~v~gavASSApv 212 (500)
++.+++++|+|.||++|..+-..++. .....++-.+|-
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45789999999999999987776654 344455555443
No 125
>PRK07868 acyl-CoA synthetase; Validated
Probab=81.94 E-value=13 Score=44.25 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=59.9
Q ss_pred CCcEEEEeCCCCCCCCcc--cccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNI--QLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~--~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
+-||+|.-|--.....+. ...+++..++++ |--++.+. ||.|.+-. .. ...+..+-+.++..++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~-g~~v~~~d---~G~~~~~~---------~~-~~~~l~~~i~~l~~~l 132 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHRA-GLDPWVID---FGSPDKVE---------GG-MERNLADHVVALSEAI 132 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHHC-CCEEEEEc---CCCCChhH---------cC-ccCCHHHHHHHHHHHH
Confidence 346666666322221111 122344445444 55688888 47543311 11 1245555555555555
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHH-hCCCeEEEEEeccccc
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRL-KYPHVVIGSLASSAPI 212 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~-kYP~~v~gavASSApv 212 (500)
..++..-. .++.++|.|.||+++.-+-. +.|+.+.+.+.-.+|+
T Consensus 133 ~~v~~~~~---~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 133 DTVKDVTG---RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHhhC---CceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 54443322 47999999999999976654 4566787777666665
No 126
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=81.87 E-value=2.8 Score=43.94 Aligned_cols=86 Identities=20% Similarity=0.197 Sum_probs=54.8
Q ss_pred CceEEEEee-eeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhhHHH----H
Q 038117 119 KALIVILEH-RYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYN-ATHAPVIAIGASYGGELA----T 192 (500)
Q Consensus 119 gA~~v~lEH-RyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G~LA----a 192 (500)
.|.||+|+. =--|-|.... .+-..-+.+|+..|+..|++.+-..+. ..+.|+.++|-||||... .
T Consensus 85 ~an~l~iD~PvGtGfS~~~~---------~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGND---------PSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp TSEEEEE--STTSTT-EESS---------GGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred ccceEEEeecCceEEeeccc---------cccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 488999984 3345554422 233567899999999999998766554 255699999999999754 4
Q ss_pred HHHHhC------CCeEEEEEecccccc
Q 038117 193 WFRLKY------PHVVIGSLASSAPIL 213 (500)
Q Consensus 193 w~R~kY------P~~v~gavASSApv~ 213 (500)
.+-..- +=-..|.+-.++-+.
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred hhhhccccccccccccccceecCcccc
Confidence 444444 223556666666554
No 127
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=81.85 E-value=7.9 Score=47.01 Aligned_cols=92 Identities=15% Similarity=0.041 Sum_probs=59.6
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhc--CceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQF--KALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~--gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
+.|+|++-|+-+... .+..+++.+ +..++.++-+..|.+.|. --++++..+|++..+
T Consensus 1068 ~~~l~~lh~~~g~~~-------~~~~l~~~l~~~~~v~~~~~~g~~~~~~~--------------~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-------QFSVLSRYLDPQWSIYGIQSPRPDGPMQT--------------ATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCeEEecCCCCchH-------HHHHHHHhcCCCCcEEEEECCCCCCCCCC--------------CCCHHHHHHHHHHHH
Confidence 356777766654432 234556555 356677776666644221 137788888887776
Q ss_pred HHHhhhcCCCCCCEEEeccChhhHHHHHHHHh---CCCeEEEE
Q 038117 166 LHIKDKYNATHAPVIAIGASYGGELATWFRLK---YPHVVIGS 205 (500)
Q Consensus 166 ~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k---YP~~v~ga 205 (500)
+.+. ...|.+++|.|+||++|..+..+ .|+.+..-
T Consensus 1127 ~~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l 1164 (1296)
T PRK10252 1127 LEQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFL 1164 (1296)
T ss_pred HhhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEE
Confidence 6432 23589999999999999998875 46655543
No 128
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=79.85 E-value=2.8 Score=45.49 Aligned_cols=63 Identities=25% Similarity=0.297 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHH--------HHHHhhh-cCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 151 YFNSAQALADYASI--------LLHIKDK-YNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 151 yLt~~QALaD~a~f--------i~~~k~~-~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
+..-.|+|.|+++= .+.+.+. |+.+-..=-..|||=||--+.-..++||++++|.+|+...+.
T Consensus 80 ~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 80 FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 34556777777542 2233333 554344567799999999999999999999999999986653
No 129
>PLN02571 triacylglycerol lipase
Probab=79.19 E-value=3.1 Score=44.03 Aligned_cols=39 Identities=23% Similarity=0.354 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
+|.++++.++++. +...+.+++++|+|.||+||+.+...
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 6788887776653 33334579999999999999987653
No 130
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.88 E-value=3.9 Score=40.65 Aligned_cols=41 Identities=20% Similarity=0.322 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
=|+++..+.++.-|+.+. ++.|+++.|-|+||++|-=..++
T Consensus 45 ~~l~~~a~~yv~~Ir~~Q-----P~GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 45 ASLDDMAAAYVAAIRRVQ-----PEGPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CCHHHHHHHHHHHHHHhC-----CCCCEEEEeeccccHHHHHHHHH
Confidence 355666665555554333 34799999999999998765443
No 131
>PLN02454 triacylglycerol lipase
Probab=77.51 E-value=7.8 Score=41.07 Aligned_cols=40 Identities=20% Similarity=0.353 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 157 ALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 157 ALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
+-.++-..++.++++|...+.+++++|+|.||+||.....
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4444555666666666544446999999999999988763
No 132
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=77.43 E-value=1.7 Score=41.36 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
.+++.+|+...+.+++..-.....++.++|-|+||.+|..+....
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc
Confidence 456666666666666654323334666677777776666655554
No 133
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=77.18 E-value=3.9 Score=41.09 Aligned_cols=58 Identities=26% Similarity=0.335 Sum_probs=44.8
Q ss_pred cccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 146 ARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 146 ~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
.++.+|.|.+|-.+++.....+++-+ .||-+|-.-|+.+=+-|.++||+.|.|-|-=+
T Consensus 74 p~~y~yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn 131 (283)
T PF03096_consen 74 PEGYQYPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVN 131 (283)
T ss_dssp -TT-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred cccccccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEe
Confidence 36789999999999999999988853 49999999999999999999999999987543
No 134
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=76.96 E-value=6 Score=38.07 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=23.0
Q ss_pred HHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 161 YASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 161 ~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
+...++.+++++ ++.+++++|+|.||++|+.+-.
T Consensus 114 ~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 114 VLPELKSALKQY--PDYKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred HHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHH
Confidence 333444444443 4578999999999999876543
No 135
>PLN02310 triacylglycerol lipase
Probab=76.37 E-value=6.3 Score=41.65 Aligned_cols=55 Identities=18% Similarity=0.345 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHH----HhCCCeEEEEEecccc
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFR----LKYPHVVIGSLASSAP 211 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R----~kYP~~v~gavASSAp 211 (500)
+|+++.+.++++..+. ..++.+++++|+|.||+||.-+. ...|..-...+.-.+|
T Consensus 189 ~qVl~eV~~L~~~y~~--~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsP 247 (405)
T PLN02310 189 EQVMQEVKRLVNFYRG--KGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAP 247 (405)
T ss_pred HHHHHHHHHHHHhhcc--cCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCC
Confidence 6777666655554332 12346899999999999998766 3345543445555555
No 136
>PLN03037 lipase class 3 family protein; Provisional
Probab=76.34 E-value=5.9 Score=43.03 Aligned_cols=55 Identities=24% Similarity=0.383 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH----hCCCe-EEEEEecccc
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL----KYPHV-VIGSLASSAP 211 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~----kYP~~-v~gavASSAp 211 (500)
+|.++++.+.++..+.. .++.+++++|+|.||+||.-+.. ..|+. -..++...+|
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsP 357 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAP 357 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCC
Confidence 78888888877655531 23457999999999999987763 35654 2234444455
No 137
>PLN02408 phospholipase A1
Probab=75.30 E-value=4.2 Score=42.40 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
+|.++.+.++++ +|.....+++++|+|.||+||+....
T Consensus 182 ~qVl~eI~~ll~----~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 182 EMVREEIARLLQ----SYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHHH----hcCCCCceEEEeccchHHHHHHHHHH
Confidence 345555444433 44433456999999999999876543
No 138
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=75.24 E-value=2.6 Score=40.05 Aligned_cols=8 Identities=13% Similarity=0.418 Sum_probs=4.1
Q ss_pred CcEEEEeC
Q 038117 89 SPILAFLG 96 (500)
Q Consensus 89 gPIfl~~g 96 (500)
.|.+|++-
T Consensus 14 ~~~Vvv~~ 21 (218)
T PF01738_consen 14 RPAVVVIH 21 (218)
T ss_dssp EEEEEEE-
T ss_pred CCEEEEEc
Confidence 56555554
No 139
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=75.08 E-value=6.7 Score=38.29 Aligned_cols=73 Identities=21% Similarity=0.312 Sum_probs=56.5
Q ss_pred HHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHH
Q 038117 112 YENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELA 191 (500)
Q Consensus 112 ~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LA 191 (500)
.+.|.+-|=.|+..|-|--|+|.|... +-..++|+ +=|..|+..-+..+++-. +..|-..+|+|+||-+.
T Consensus 50 A~~a~~~Gf~Vlt~dyRG~g~S~p~~~------~~~~~~~~--DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~ 119 (281)
T COG4757 50 AAAAAKAGFEVLTFDYRGIGQSRPASL------SGSQWRYL--DWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQAL 119 (281)
T ss_pred HHHhhccCceEEEEecccccCCCcccc------ccCccchh--hhhhcchHHHHHHHHhhC--CCCceEEeeccccceee
Confidence 356777788999999999999999762 33456665 567888888888887644 45799999999999765
Q ss_pred HHH
Q 038117 192 TWF 194 (500)
Q Consensus 192 aw~ 194 (500)
.-+
T Consensus 120 gL~ 122 (281)
T COG4757 120 GLL 122 (281)
T ss_pred ccc
Confidence 543
No 140
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=74.81 E-value=5.7 Score=41.86 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCe------EEEEEecccccc
Q 038117 154 SAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHV------VIGSLASSAPIL 213 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~------v~gavASSApv~ 213 (500)
.++....+...|+.+.+.. +.|++++|+|+||.++-.|-+..+.. |.+.|+=++|..
T Consensus 99 ~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 3466666666776665433 57999999999999999999888753 677777777753
No 141
>COG0627 Predicted esterase [General function prediction only]
Probab=73.62 E-value=9.5 Score=39.10 Aligned_cols=119 Identities=19% Similarity=0.145 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEE--EeeeeeecCCC----CCCchhhccccccccCCCHHHH---
Q 038117 87 GNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVI--LEHRYYGKSVP----FGSRKAALKNARHRGYFNSAQA--- 157 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~--lEHRyyG~S~P----~~~~~~~~~s~~nl~yLt~~QA--- 157 (500)
..=||.++.+|++.-+..+...+-+...|.+.|..++. .+-||.|.-.+ .+.. .==|++..|.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~--------~sfY~d~~~~~~~ 123 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG--------ASFYSDWTQPPWA 123 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCc--------cceecccccCccc
Confidence 34689999999975543333334456788999999888 78899987655 2210 0012222222
Q ss_pred --HHHHHHHHH-----HHhhhcCCCC--CCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccc
Q 038117 158 --LADYASILL-----HIKDKYNATH--APVIAIGASYGGELATWFRLKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 158 --LaD~a~fi~-----~~k~~~~~~~--~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~ 213 (500)
--++..|+. .+.+..+... ..--++|.|.||.=|--+..|+|+.|..+.+=|+.+.
T Consensus 124 ~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 124 SGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred cCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 011111111 1222222221 2567899999999999999999988877766665554
No 142
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=73.58 E-value=19 Score=37.28 Aligned_cols=95 Identities=22% Similarity=0.294 Sum_probs=55.4
Q ss_pred CCc-EEEEeCCCCCCCC--cccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 88 NSP-ILAFLGAEAPIDD--NIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 88 ggP-Ifl~~gGE~~~~~--~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
.-| ||+|-||=.-+.+ .....++...+|.+.|+.+|.++-|===+. |++. .|-...-|| ..|
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-~~Pa-----------~y~D~~~Al---~w~ 153 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-PFPA-----------AYDDGWAAL---KWV 153 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-CCCc-----------cchHHHHHH---HHH
Confidence 356 4555566544443 122347788999999999999988754332 3441 233333332 222
Q ss_pred HHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 165 LLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 165 i~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
.++.-.++..+-.++++.|-|-||++|+-..++
T Consensus 154 ~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r 186 (336)
T KOG1515|consen 154 LKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQR 186 (336)
T ss_pred HHhHHHHhCCCcccEEEEccCccHHHHHHHHHH
Confidence 221001233444569999999999999876654
No 143
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=73.54 E-value=7.7 Score=31.09 Aligned_cols=60 Identities=13% Similarity=0.083 Sum_probs=40.3
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHh---cCceEEEEeeeeeecCCCCCCchhhccccccccCC-CHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQ---FKALIVILEHRYYGKSVPFGSRKAALKNARHRGYF-NSAQALADYASI 164 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~---~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yL-t~~QALaD~a~f 164 (500)
..+++++=|-++-. +...++|+. .|-.|+...||-+|+|-+.. .+. +.++-+.|+..|
T Consensus 16 k~~v~i~HG~~eh~------~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r------------g~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 16 KAVVVIVHGFGEHS------GRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR------------GHIDSFDDYVDDLHQF 77 (79)
T ss_pred CEEEEEeCCcHHHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc------------cccCCHHHHHHHHHHH
Confidence 45777777664322 333444333 58899999999999997421 123 557899999988
Q ss_pred HH
Q 038117 165 LL 166 (500)
Q Consensus 165 i~ 166 (500)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 74
No 144
>PLN02324 triacylglycerol lipase
Probab=73.17 E-value=5.7 Score=42.03 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
+|.++.+.++++ +|...+..++++|+|.||+||+-...
T Consensus 197 eqVl~eV~~L~~----~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLE----LYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHH----HCCCCCceEEEecCcHHHHHHHHHHH
Confidence 556666655443 44434457999999999999987763
No 145
>PLN02802 triacylglycerol lipase
Probab=73.00 E-value=9 Score=41.53 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=18.9
Q ss_pred hcCCCCCCEEEeccChhhHHHHHHH
Q 038117 171 KYNATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 171 ~~~~~~~pwI~~GGSY~G~LAaw~R 195 (500)
+|...+..++++|+|.||+||....
T Consensus 324 ~Y~~e~~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 324 KYKGEELSITVTGHSLGAALALLVA 348 (509)
T ss_pred hCCCCcceEEEeccchHHHHHHHHH
Confidence 4544445799999999999987543
No 146
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=71.29 E-value=38 Score=34.48 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=61.7
Q ss_pred cEEEEeCCCCCCCCcccccchHHHhHHhcC---ceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHH
Q 038117 90 PILAFLGAEAPIDDNIQLSGFTYENAHQFK---ALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILL 166 (500)
Q Consensus 90 PIfl~~gGE~~~~~~~~~~g~~~~~A~~~g---A~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~ 166 (500)
.++|++||=++.-. ...++..||+.+. =.+|.+.-|= +-.-+.+=+.+|=.+|++.+|+
T Consensus 34 ~~llfIGGLtDGl~---tvpY~~~La~aL~~~~wsl~q~~LsS---------------Sy~G~G~~SL~~D~~eI~~~v~ 95 (303)
T PF08538_consen 34 NALLFIGGLTDGLL---TVPYLPDLAEALEETGWSLFQVQLSS---------------SYSGWGTSSLDRDVEEIAQLVE 95 (303)
T ss_dssp SEEEEE--TT--TT----STCHHHHHHHHT-TT-EEEEE--GG---------------GBTTS-S--HHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCCC---CCchHHHHHHHhccCCeEEEEEEecC---------------ccCCcCcchhhhHHHHHHHHHH
Confidence 48999999765322 2367778887773 2444443321 1235667788999999999999
Q ss_pred HHhhhcCC--CCCCEEEeccChhhHHHHHHHHhCC-----CeEEEEEecccccc
Q 038117 167 HIKDKYNA--THAPVIAIGASYGGELATWFRLKYP-----HVVIGSLASSAPIL 213 (500)
Q Consensus 167 ~~k~~~~~--~~~pwI~~GGSY~G~LAaw~R~kYP-----~~v~gavASSApv~ 213 (500)
+++..-+. ...++|++|+|=|=--...+-.+.. ..++|+|-=. ||-
T Consensus 96 ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQA-pVS 148 (303)
T PF08538_consen 96 YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQA-PVS 148 (303)
T ss_dssp HHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEE-E--
T ss_pred HHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeC-CCC
Confidence 99976422 4569999999999777666655543 5688887654 453
No 147
>PLN02761 lipase class 3 family protein
Probab=70.90 E-value=5.7 Score=43.13 Aligned_cols=41 Identities=20% Similarity=0.197 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHH
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R 195 (500)
+|.++.+.++++.........+.+++++|+|.||+||.-..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 45555544443322111123456799999999999998766
No 148
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=69.24 E-value=13 Score=36.00 Aligned_cols=40 Identities=18% Similarity=0.234 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 156 QALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 156 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+..+.++.||+.+.+.-+ +||=++|+|.||++|-|.-+..
T Consensus 57 ~~~~~l~~fI~~Vl~~TG---akVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 57 ESAKQLRAFIDAVLAYTG---AKVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhhC---CEEEEEEcCCcCHHHHHHHHHc
Confidence 344889999998875433 3899999999999999997654
No 149
>PLN02753 triacylglycerol lipase
Probab=68.57 E-value=6.7 Score=42.66 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
+|.++.+.+++...+.+ ..++.+++++|+|.||+||.-+..
T Consensus 291 eQVl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHHH
Confidence 55666655554433221 113568999999999999988753
No 150
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=67.34 E-value=11 Score=35.71 Aligned_cols=56 Identities=23% Similarity=0.422 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
-|.+|..+|+++.|++..+..+. .++|++|-|+|.-..-..-..-|.....-|+.-
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~~--~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v 100 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWGR--KRVVLIGYSFGADVLPFIYNRLPAALRARVAQV 100 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhCC--ceEEEEeecCCchhHHHHHhhCCHHHHhheeEE
Confidence 46799999999999988877553 579999999999777666666666555555444
No 151
>PRK10673 acyl-CoA esterase; Provisional
Probab=65.81 E-value=5.6 Score=38.14 Aligned_cols=58 Identities=10% Similarity=0.285 Sum_probs=37.5
Q ss_pred cEEEEEcCCCCccCCCCccccCCC-CCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYHF-FDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s~-~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
-.+++++|+.||+........... -+.....+++|++|..-+ .+| +++.+.|++||++
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p-------~~~~~~l~~fl~~ 254 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHA-----EKP-------DAVLRAIRRYLND 254 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeec-----cCH-------HHHHHHHHHHHhc
Confidence 359999999999986443322110 034567788999997543 233 3566777788764
No 152
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=65.36 E-value=15 Score=34.11 Aligned_cols=91 Identities=15% Similarity=0.117 Sum_probs=57.2
Q ss_pred EEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhh
Q 038117 92 LAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDK 171 (500)
Q Consensus 92 fl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~ 171 (500)
++++.|.+.... ..+..-+++++... +-+|..-. ..| |+...+..+.+.
T Consensus 1 v~IvhG~~~s~~----~HW~~wl~~~l~~~-~~V~~~~~--~~P------------------------~~~~W~~~l~~~ 49 (171)
T PF06821_consen 1 VLIVHGYGGSPP----DHWQPWLERQLENS-VRVEQPDW--DNP------------------------DLDEWVQALDQA 49 (171)
T ss_dssp EEEE--TTSSTT----TSTHHHHHHHHTTS-EEEEEC----TS--------------------------HHHHHHHHHHC
T ss_pred CEEeCCCCCCCc----cHHHHHHHHhCCCC-eEEecccc--CCC------------------------CHHHHHHHHHHH
Confidence 355666654332 23556677777766 55554222 111 344577777776
Q ss_pred cCCCCCCEEEeccChhhHHHHHHH-HhCCCeEEEEEecccccc
Q 038117 172 YNATHAPVIAIGASYGGELATWFR-LKYPHVVIGSLASSAPIL 213 (500)
Q Consensus 172 ~~~~~~pwI~~GGSY~G~LAaw~R-~kYP~~v~gavASSApv~ 213 (500)
....+.++|++|+|.|..+++.+. ...+.-+.|++-=|++-.
T Consensus 50 i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 50 IDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp CHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 665567899999999999999888 889999999987776643
No 153
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=64.99 E-value=7.1 Score=37.33 Aligned_cols=106 Identities=20% Similarity=0.114 Sum_probs=64.8
Q ss_pred EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhh
Q 038117 91 ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKD 170 (500)
Q Consensus 91 Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~ 170 (500)
|+++.|-=|.....+ ..-+..+-+...-.||++.-|-||+|+|-. |-.-++=-..|...-+.-++.
T Consensus 45 iLlipGalGs~~tDf--~pql~~l~k~l~~TivawDPpGYG~SrPP~------------Rkf~~~ff~~Da~~avdLM~a 110 (277)
T KOG2984|consen 45 ILLIPGALGSYKTDF--PPQLLSLFKPLQVTIVAWDPPGYGTSRPPE------------RKFEVQFFMKDAEYAVDLMEA 110 (277)
T ss_pred eEecccccccccccC--CHHHHhcCCCCceEEEEECCCCCCCCCCCc------------ccchHHHHHHhHHHHHHHHHH
Confidence 555555444333211 112334555666789999999999999944 113334444554433333332
Q ss_pred hcCCCCCCEEEeccChhhHHHHHHHHhCCCeEE--EEEecccccc
Q 038117 171 KYNATHAPVIAIGASYGGELATWFRLKYPHVVI--GSLASSAPIL 213 (500)
Q Consensus 171 ~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~--gavASSApv~ 213 (500)
. +-.|+-+.|-|=||-.|.-...|||+-|. ..|+..|-|.
T Consensus 111 L---k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn 152 (277)
T KOG2984|consen 111 L---KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN 152 (277)
T ss_pred h---CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec
Confidence 2 11589999999999999988999998665 4445554444
No 154
>PRK04940 hypothetical protein; Provisional
Probab=62.90 E-value=16 Score=34.37 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecc
Q 038117 153 NSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASS 209 (500)
Q Consensus 153 t~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASS 209 (500)
+.++|++=+...|..+... + ...|++++|-|-||.-|.|+..+|- ..+.+..=
T Consensus 38 ~P~~a~~~l~~~i~~~~~~-~-~~~~~~liGSSLGGyyA~~La~~~g--~~aVLiNP 90 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL-S-DDERPLICGVGLGGYWAERIGFLCG--IRQVIFNP 90 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc-c-CCCCcEEEEeChHHHHHHHHHHHHC--CCEEEECC
Confidence 4566766554444432211 1 1247999999999999999999986 34444443
No 155
>PLN02162 triacylglycerol lipase
Probab=61.39 E-value=14 Score=39.81 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=17.7
Q ss_pred CCCCEEEeccChhhHHHHHH
Q 038117 175 THAPVIAIGASYGGELATWF 194 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~ 194 (500)
++.+++++|+|.||+||+-+
T Consensus 276 p~~kliVTGHSLGGALAtLa 295 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALF 295 (475)
T ss_pred CCceEEEEecChHHHHHHHH
Confidence 35789999999999999886
No 156
>PLN02719 triacylglycerol lipase
Probab=59.25 E-value=14 Score=40.13 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhhcC---CCCCCEEEeccChhhHHHHHHH
Q 038117 155 AQALADYASILLHIKDKYN---ATHAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~---~~~~pwI~~GGSY~G~LAaw~R 195 (500)
+|.++.+.+ +.++|. ..+.+++++|+|.||+||+-..
T Consensus 277 eQVl~eV~r----L~~~Ypd~~ge~~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 277 EQVLTEVKR----LVERYGDEEGEELSITVTGHSLGGALAVLSA 316 (518)
T ss_pred HHHHHHHHH----HHHHCCcccCCcceEEEecCcHHHHHHHHHH
Confidence 455554444 333443 2345799999999999998755
No 157
>PLN00413 triacylglycerol lipase
Probab=58.61 E-value=14 Score=39.71 Aligned_cols=21 Identities=38% Similarity=0.548 Sum_probs=18.4
Q ss_pred CCCCEEEeccChhhHHHHHHH
Q 038117 175 THAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R 195 (500)
++.+++++|+|.||+||+.+.
T Consensus 282 p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHH
Confidence 357899999999999999875
No 158
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=57.19 E-value=14 Score=38.08 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=17.5
Q ss_pred CCCEEEeccChhhHHHHHHH
Q 038117 176 HAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 176 ~~pwI~~GGSY~G~LAaw~R 195 (500)
+-.++++|+|-||+||.-+.
T Consensus 170 ~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred CcEEEEecCChHHHHHHHHH
Confidence 56899999999999998755
No 159
>PLN02934 triacylglycerol lipase
Probab=56.74 E-value=10 Score=41.14 Aligned_cols=21 Identities=38% Similarity=0.607 Sum_probs=18.5
Q ss_pred CCCCEEEeccChhhHHHHHHH
Q 038117 175 THAPVIAIGASYGGELATWFR 195 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R 195 (500)
++.+++++|+|.||+||+.+.
T Consensus 319 p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred CCCeEEEeccccHHHHHHHHH
Confidence 457899999999999999884
No 160
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=56.43 E-value=49 Score=35.79 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=56.9
Q ss_pred CCCcEEEEeCCCCCCCCc-ccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHH
Q 038117 87 GNSPILAFLGAEAPIDDN-IQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASIL 165 (500)
Q Consensus 87 ~ggPIfl~~gGE~~~~~~-~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi 165 (500)
.+.||++||=|=+=.-+. ....--...||++-+..+|.+-||= | +++=+..+ +.++-+.-.+.-.|-|...-+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRL-G---~lGfL~~~--~~~~~~~~~~n~Gl~DqilAL 165 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRL-G---ALGFLDLS--SLDTEDAFASNLGLLDQILAL 165 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccc-c---cceeeehh--hccccccccccccHHHHHHHH
Confidence 357988888543211111 1000113578999889999999993 1 12210000 000001111114567776666
Q ss_pred HHHhhh---cCCCCCCEEEeccChhhHHHHHHHHhCC
Q 038117 166 LHIKDK---YNATHAPVIAIGASYGGELATWFRLKYP 199 (500)
Q Consensus 166 ~~~k~~---~~~~~~pwI~~GGSY~G~LAaw~R~kYP 199 (500)
++++++ ++.+..-|-+||-|-|++-++++ +.+|
T Consensus 166 kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~L-la~P 201 (491)
T COG2272 166 KWVRDNIEAFGGDPQNVTLFGESAGAASILTL-LAVP 201 (491)
T ss_pred HHHHHHHHHhCCCccceEEeeccchHHHHHHh-hcCc
Confidence 666654 34444568899999888777764 4444
No 161
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=55.67 E-value=34 Score=34.92 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhhcC-CCCCCEEEeccChhhH----HHHHHHH
Q 038117 154 SAQALADYASILLHIKDKYN-ATHAPVIAIGASYGGE----LATWFRL 196 (500)
Q Consensus 154 ~~QALaD~a~fi~~~k~~~~-~~~~pwI~~GGSY~G~----LAaw~R~ 196 (500)
.++| .|+..|++.+=+.+. ..+.|+-++|-||||. ||..+-.
T Consensus 28 ~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~ 74 (319)
T PLN02213 28 ISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 74 (319)
T ss_pred HHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHh
Confidence 3455 999998887654543 3678999999999996 5665543
No 162
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=52.31 E-value=20 Score=36.81 Aligned_cols=63 Identities=11% Similarity=0.070 Sum_probs=41.0
Q ss_pred cEEEEEcCCCCccCCCCccc----cCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVK----TYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQYY 492 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~----~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e~~ 492 (500)
--+++++|+.|+........ ... ......++|||++|+.=+ .+|+ +.++++.+.|..||.+..
T Consensus 280 ~P~Lii~G~~D~vv~~~~~~~l~~~~~-~~~~~l~~i~~~gH~l~~-----e~p~---~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 280 LPLLILHGEADKVTDPSVSKFLYEKAS-SSDKKLKLYEDAYHSILE-----GEPD---EMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CCEEEEEeCCCCccChHHHHHHHHHcC-CCCceEEEeCCCeeeccc-----CCCh---hhHHHHHHHHHHHHHHhc
Confidence 35999999999987644321 111 024567789999997422 2332 335668888999998654
No 163
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=49.67 E-value=43 Score=33.73 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=59.2
Q ss_pred HHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCC-CCCCEEEeccChhhHHHHH
Q 038117 115 AHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNA-THAPVIAIGASYGGELATW 193 (500)
Q Consensus 115 A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~-~~~pwI~~GGSY~G~LAaw 193 (500)
.-..|-.||+-.|--.|. ||.. . -+.-+++-|.++=.+.+....+. .+.||.++|.|=||.=+.|
T Consensus 22 ~L~~GyaVv~pDY~Glg~--~y~~-------~-----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~ 87 (290)
T PF03583_consen 22 WLARGYAVVAPDYEGLGT--PYLN-------G-----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALW 87 (290)
T ss_pred HHHCCCEEEecCCCCCCC--cccC-------c-----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHH
Confidence 446688899988877766 7652 1 24567777877777766654332 4679999999999988888
Q ss_pred HHH----hCCCe---EEEEEeccccc
Q 038117 194 FRL----KYPHV---VIGSLASSAPI 212 (500)
Q Consensus 194 ~R~----kYP~~---v~gavASSApv 212 (500)
... --|++ +.|+++.+.|.
T Consensus 88 AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 88 AAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHHhHHhCcccccceeEEeccCCcc
Confidence 763 35777 57877766554
No 164
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.61 E-value=22 Score=40.50 Aligned_cols=58 Identities=31% Similarity=0.378 Sum_probs=33.7
Q ss_pred HHHHHHHHHHH-HHh---hhcCC-CCCC------EEEeccChhhHHHHHHHHhCCCeEEEE----Eeccccccc
Q 038117 156 QALADYASILL-HIK---DKYNA-THAP------VIAIGASYGGELATWFRLKYPHVVIGS----LASSAPILY 214 (500)
Q Consensus 156 QALaD~a~fi~-~~k---~~~~~-~~~p------wI~~GGSY~G~LAaw~R~kYP~~v~ga----vASSApv~a 214 (500)
|.|.|-++++. .+| ..|.. ++-+ ||++|+||||+.|- ....+|+.+.|+ +-=|+|..+
T Consensus 150 ~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAr-a~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 150 HILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVAR-ATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHH-HHHhhhhhccchhhhhhhhcCcccC
Confidence 56677666443 333 23332 2223 99999999998763 344555555554 445666654
No 165
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=49.59 E-value=49 Score=33.87 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=25.5
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeee
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHR 128 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHR 128 (500)
-|||++.=|=|.... ..+.+-.+||. .|-.|.++|||
T Consensus 118 ~PvvvFSHGLggsRt--~YSa~c~~LAS-hG~VVaavEHR 154 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRT--LYSAYCTSLAS-HGFVVAAVEHR 154 (399)
T ss_pred ccEEEEecccccchh--hHHHHhhhHhh-CceEEEEeecc
Confidence 599999887654322 22345566765 58888899999
No 166
>PHA02857 monoglyceride lipase; Provisional
Probab=49.53 E-value=24 Score=34.46 Aligned_cols=59 Identities=15% Similarity=0.095 Sum_probs=41.2
Q ss_pred cEEEEEcCCCCccCCCCccc----cCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVK----TYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~----~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
--++++.|+.|++-...... ... ..+...++++++|..=+ +....|+++.+.|..||..
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~--~~~~~~~~~~~gH~~~~---------e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHAN--CNREIKIYEGAKHHLHK---------ETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHcc--CCceEEEeCCCcccccC---------CchhHHHHHHHHHHHHHHH
Confidence 34899999999997633221 121 23567789999997532 1125788999999999985
No 167
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=49.33 E-value=29 Score=37.24 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeE
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVV 202 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v 202 (500)
+|-+..++.+|+.+-+.++ +.|+|++++|.||.+.-+|-..+|...
T Consensus 162 d~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~~~ 207 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEAEG 207 (473)
T ss_pred HHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccccc
Confidence 5667777777776655443 379999999999999999999999876
No 168
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=48.33 E-value=43 Score=33.91 Aligned_cols=56 Identities=23% Similarity=0.299 Sum_probs=49.3
Q ss_pred cccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEe
Q 038117 146 ARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLA 207 (500)
Q Consensus 146 ~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavA 207 (500)
.++..|-|.||-.+|+.....++.-+ -+|-+|-.-|..+=+-|.++||+.|-|-|-
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvL 152 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVL 152 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEE
Confidence 46889999999999999888888743 489999999999999999999999998764
No 169
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=48.00 E-value=30 Score=37.60 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=43.2
Q ss_pred ccCCccEEEEEcCCCCccCCCC--c------cccCC-----CCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHH
Q 038117 416 LRRSTSNIIFSNGMRDPFSRGG--W------VKTYH-----FFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVK 482 (500)
Q Consensus 416 ~~~~~sniiFtnG~~DPW~~~g--~------~~~~s-----~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~ 482 (500)
++..+-+||.-||.-||=-.-. + ..... ..+-...+++||-+||.---.+.+. ..+.
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~----------d~l~ 418 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF----------DALT 418 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC----------CHHH
Confidence 3445788999999999974311 1 01111 0145578999999999864433332 5788
Q ss_pred HHHHHHHHH
Q 038117 483 IMQGWITQY 491 (500)
Q Consensus 483 ~i~~Wl~e~ 491 (500)
.|.+|+++-
T Consensus 419 aL~~WVE~G 427 (474)
T PF07519_consen 419 ALVDWVENG 427 (474)
T ss_pred HHHHHHhCC
Confidence 899999853
No 170
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=47.11 E-value=17 Score=34.23 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=35.0
Q ss_pred cEEEEEcCCCCccCCCCccccC-CCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTY-HFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWIT 489 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~-s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~ 489 (500)
-.+++++|+.|++......... ..-++...+.+++++|...+ .+| ++..+.|.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~-------~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNV-----TDP-------ETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccc-----cCH-------HHHHHHHHHHhc
Confidence 4599999999998753221110 00034556788999999655 122 345566777764
No 171
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=46.67 E-value=18 Score=37.16 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=29.2
Q ss_pred cEEEEEcCCCCccCCCCccccCC-CCCCccEEEcCCCcccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYH-FFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s-~~~~~~~~~I~gg~Hc~Dl 462 (500)
-.++++.|+.|||-..--..... .-+++...+|+||+||.-+
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~ 307 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHL 307 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCccccc
Confidence 34999999999998754221110 0045678899999999655
No 172
>COG3544 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.27 E-value=18 Score=33.79 Aligned_cols=24 Identities=17% Similarity=0.710 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 038117 471 DWLVQQRKTEVKIMQGWITQYYDD 494 (500)
Q Consensus 471 ~~l~~aR~~~~~~i~~Wl~e~~~~ 494 (500)
++|.++++.+|+.++.|+++|+++
T Consensus 167 e~II~aQ~aEI~qM~qwl~~~~~~ 190 (190)
T COG3544 167 EQIIEAQEAEINQMEQWLKAWYGQ 190 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCC
Confidence 357788999999999999999863
No 173
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=46.09 E-value=69 Score=33.74 Aligned_cols=117 Identities=16% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCCCcEEEEeCCCCCCCCc--------------cc--ccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccc
Q 038117 86 GGNSPILAFLGAEAPIDDN--------------IQ--LSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHR 149 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~--------------~~--~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl 149 (500)
++..|.+|++-|-|..... +. ..++-.++|+ .|-.+|++.-+.||+..+-... ..
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk-~GYVvla~D~~g~GER~~~e~~--------~~ 182 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK-RGYVVLAPDALGFGERGDMEGA--------AQ 182 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT-TTSEEEEE--TTSGGG-SSCCC--------TT
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh-CCCEEEEEcccccccccccccc--------cc
Confidence 4457899998876532100 00 1123345554 5999999999999998764421 01
Q ss_pred cCCCHHHHHH----------------HHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 150 GYFNSAQALA----------------DYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 150 ~yLt~~QALa----------------D~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
++-..-|+|+ |.-+.+.+++..-..+..++.++|-|.||..+-|+...-|.+ .++++++...
T Consensus 183 ~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRI-ka~v~~~~l~ 260 (390)
T PF12715_consen 183 GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRI-KATVANGYLC 260 (390)
T ss_dssp TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT---EEEEES-B-
T ss_pred ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhh-HhHhhhhhhh
Confidence 1111122322 222233444432222445899999999999988888888877 6666766554
No 174
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=45.44 E-value=33 Score=35.46 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=35.4
Q ss_pred EEEEEcCCCCccCCCCc--------cccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 422 NIIFSNGMRDPFSRGGW--------VKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 422 niiFtnG~~DPW~~~g~--------~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
-++++.|+.||...... ....- ++...++|+|++|+.-+ ..|+ ++.+.|.+||++
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~-----E~Pe-------~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHD-----DRPD-------LVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccc-----cCHH-------HHHHHHHHHHHh
Confidence 48999999999865431 11111 34567789999997432 3343 455677778764
No 175
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus (Caulobacter vibrioides) (Q9AAT9 from SWISSPROT). These proteins may be related to IPR001910 from INTERPRO.; PDB: 2YHG_A.
Probab=44.33 E-value=35 Score=33.92 Aligned_cols=50 Identities=18% Similarity=0.166 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHH--HhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEE
Q 038117 153 NSAQALADYASILLH--IKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSL 206 (500)
Q Consensus 153 t~~QALaD~a~fi~~--~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gav 206 (500)
|+.|||-|+..=... +++.. .|..++.-|-.=.-.+|+|..||+++.-.-
T Consensus 127 tlAqAL~~i~~~~~~~~~~~~~----~Klrvy~I~dQDdtg~wIr~~fP~l~yI~s 178 (260)
T PF07632_consen 127 TLAQALWDIKETRSPEEAARFV----SKLRVYSISDQDDTGAWIRKNFPDLFYIES 178 (260)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHH----HTEEEEEES--SHHHHHHHHH-TTSEEEEE
T ss_pred HHHHHHHHHHHhcCHHHHHHHH----hhEEEEeccCCcchhhHHHHhCCCeEEEEe
Confidence 678999996431111 11111 134444444444559999999999998654
No 176
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=42.84 E-value=23 Score=35.07 Aligned_cols=55 Identities=9% Similarity=0.108 Sum_probs=38.2
Q ss_pred cEEEEEcCCCCccCCCCcccc-----------CCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKT-----------YHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWIT 489 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~-----------~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~ 489 (500)
..+++..|..||+... +... .+ +.+....+++++|+.- . ..+|+++.+.|.+||.
T Consensus 208 ~P~ll~~g~~D~~~~~-~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~----~-------e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 208 GPVLFILSGNDLTAQE-FADSVLGEPAWRGALED--PGIERVEIDGADHTFS----D-------RVWREWVAARTTEWLR 273 (274)
T ss_pred CcEEEEEcCcchhHHH-HHHHhccChhhHHHhhc--CCeEEEecCCCCcccc----c-------HHHHHHHHHHHHHHHh
Confidence 4588888999988531 1100 12 4566788999999631 1 2788999999999985
No 177
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.64 E-value=1.2e+02 Score=30.28 Aligned_cols=107 Identities=16% Similarity=0.201 Sum_probs=56.8
Q ss_pred CceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCC-Cchhhccccccc
Q 038117 71 QTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFG-SRKAALKNARHR 149 (500)
Q Consensus 71 ~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~-~~~~~~~s~~nl 149 (500)
.-|.-.+|+... ....|+|+.+.|---.. ||..+.|+++--..+.= -|+|--|.--- .+.+++....+.
T Consensus 14 si~~~~~~v~~~---~~~~~li~~IpGNPG~~------gFY~~F~~~L~~~l~~r-~~~wtIsh~~H~~~P~sl~~~~s~ 83 (301)
T KOG3975|consen 14 SILTLKPWVTKS---GEDKPLIVWIPGNPGLL------GFYTEFARHLHLNLIDR-LPVWTISHAGHALMPASLREDHSH 83 (301)
T ss_pred cceeeeeeeccC---CCCceEEEEecCCCCch------hHHHHHHHHHHHhcccc-cceeEEeccccccCCccccccccc
Confidence 456677888765 45789999998853333 55666555443332210 23554443100 000111122333
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhh
Q 038117 150 GYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGG 188 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G 188 (500)
+ -.-.=.|+|-++=...+-+++.+++.+.+++|+|-|.
T Consensus 84 ~-~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGa 121 (301)
T KOG3975|consen 84 T-NEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGA 121 (301)
T ss_pred c-cccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhH
Confidence 3 1122346665543333444677888999999999763
No 178
>PRK11460 putative hydrolase; Provisional
Probab=40.57 E-value=32 Score=33.19 Aligned_cols=54 Identities=13% Similarity=0.048 Sum_probs=34.8
Q ss_pred cEEEEEcCCCCccCCCCcc-------ccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWV-------KTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIM 484 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~-------~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i 484 (500)
+.|++.+|..||+-..... +... ..+....+|+++|.. +++++..+++.+.+.|
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--~~~~~~~~~~~gH~i--------~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQEALISLG--GDVTLDIVEDLGHAI--------DPRLMQFALDRLRYTV 209 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHHHHHHHCC--CCeEEEEECCCCCCC--------CHHHHHHHHHHHHHHc
Confidence 5699999999999873321 1112 345566679999986 3455555655555554
No 179
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=40.48 E-value=93 Score=31.74 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=25.7
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeee
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHR 128 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHR 128 (500)
.+|++++|.-+..- +.+..++|+++|+.+|..-.+
T Consensus 4 ~~~i~i~GptgsGK-----t~la~~la~~~~~~iis~Ds~ 38 (307)
T PRK00091 4 PKVIVIVGPTASGK-----TALAIELAKRLNGEIISADSM 38 (307)
T ss_pred ceEEEEECCCCcCH-----HHHHHHHHHhCCCcEEecccc
Confidence 35777777654432 356778999999999988775
No 180
>PF03283 PAE: Pectinacetylesterase
Probab=40.44 E-value=1.2e+02 Score=31.73 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=23.4
Q ss_pred CEEEeccChhhHH----HHHHHHhCC-CeEEEEEecccccccc
Q 038117 178 PVIAIGASYGGEL----ATWFRLKYP-HVVIGSLASSAPILYY 215 (500)
Q Consensus 178 pwI~~GGSY~G~L----Aaw~R~kYP-~~v~gavASSApv~a~ 215 (500)
.+|+.|+|-||.= +-++|..+| ..-.-.++-|+.....
T Consensus 157 ~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 157 QVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred eEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 4666666666532 346789999 4455566666666543
No 181
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=38.71 E-value=1.3e+02 Score=27.07 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=38.9
Q ss_pred HHhHHhcC--ceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhH
Q 038117 112 YENAHQFK--ALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGE 189 (500)
Q Consensus 112 ~~~A~~~g--A~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~ 189 (500)
..+++.+. ..++.++.+-+|.+.+.. -+.++..++++..+. ... ...|++++|.|+||.
T Consensus 16 ~~~~~~l~~~~~v~~~~~~g~~~~~~~~--------------~~~~~~~~~~~~~l~---~~~--~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 16 ARLAAALRGRRDVSALPLPGFGPGEPLP--------------ASADALVEAQAEAVL---RAA--GGRPFVLVGHSSGGL 76 (212)
T ss_pred HHHHHhcCCCccEEEecCCCCCCCCCCC--------------CCHHHHHHHHHHHHH---Hhc--CCCCeEEEEECHHHH
Confidence 34555543 356666666666544322 123333333333332 222 246899999999999
Q ss_pred HHHHHHHhC
Q 038117 190 LATWFRLKY 198 (500)
Q Consensus 190 LAaw~R~kY 198 (500)
++..+..+.
T Consensus 77 ~a~~~a~~l 85 (212)
T smart00824 77 LAHAVAARL 85 (212)
T ss_pred HHHHHHHHH
Confidence 997776654
No 182
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.53 E-value=22 Score=33.15 Aligned_cols=111 Identities=18% Similarity=0.186 Sum_probs=70.8
Q ss_pred CCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHH--
Q 038117 86 GGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYAS-- 163 (500)
Q Consensus 86 ~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~-- 163 (500)
-.|.||+++-...|....+ .+.|.+..+|..+.+-.|.| |--|-- +.=.+|...---||-++
T Consensus 24 HaG~pVvvFpts~Grf~ey-ed~G~v~ala~fie~G~vQl----ft~~gl-----------dsESf~a~h~~~adr~~rH 87 (227)
T COG4947 24 HAGIPVVVFPTSGGRFNEY-EDFGMVDALASFIEEGLVQL----FTLSGL-----------DSESFLATHKNAADRAERH 87 (227)
T ss_pred CCCCcEEEEecCCCcchhh-hhcccHHHHHHHHhcCcEEE----EEeccc-----------chHhHhhhcCCHHHHHHHH
Confidence 4688998887655543322 34577888888877666653 332211 11123333333344322
Q ss_pred --HHHHHhhh-cCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEecccccccc
Q 038117 164 --ILLHIKDK-YNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILYY 215 (500)
Q Consensus 164 --fi~~~k~~-~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a~ 215 (500)
.-+++.++ +. ..-|+.|+|.||-.|+=|-..+||++-+.||=|++-.+.
T Consensus 88 ~AyerYv~eEalp---gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 88 RAYERYVIEEALP---GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHhhcC---CCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 22333332 33 347889999999999999999999999999999987664
No 183
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=35.84 E-value=36 Score=33.05 Aligned_cols=39 Identities=10% Similarity=-0.044 Sum_probs=26.8
Q ss_pred EEEEEcCCCCccCCCCcccc---CCCCCCccEEEcCCCcccccc
Q 038117 422 NIIFSNGMRDPFSRGGWVKT---YHFFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 422 niiFtnG~~DPW~~~g~~~~---~s~~~~~~~~~I~gg~Hc~Dl 462 (500)
-++++.|+.||.-....... .. ++...++||+++|+.-+
T Consensus 225 Pvlli~G~~D~~v~~~~~~~~~~~~--~~~~~~~i~~agH~~~~ 266 (282)
T TIGR03343 225 KTLVTWGRDDRFVPLDHGLKLLWNM--PDAQLHVFSRCGHWAQW 266 (282)
T ss_pred CEEEEEccCCCcCCchhHHHHHHhC--CCCEEEEeCCCCcCCcc
Confidence 48999999999875433221 12 35667789999999533
No 184
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=35.08 E-value=51 Score=31.53 Aligned_cols=45 Identities=20% Similarity=0.150 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRL 196 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~ 196 (500)
-.+++....++..|....+.......|++.+|+|.||-++-++-.
T Consensus 53 ~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 53 DGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 445555555665555444444434569999999999999876544
No 185
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=35.07 E-value=45 Score=33.68 Aligned_cols=62 Identities=13% Similarity=0.147 Sum_probs=40.9
Q ss_pred cEEEEEcCCCCccCCCCcccc----CCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKT----YHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQY 491 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~----~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e~ 491 (500)
.-+++.+|..|++-.-..... .. .+....++++|++|..-+- .|+ ..++++.+.|.+||.+.
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~-~~~~~l~~~~~a~H~~~~e-----~pd---~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAK-SEDKTIKIYDGMMHSLLFG-----EPD---ENIEIVRRDILSWLNER 317 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhc-cCCceEEEcCCcEeeeecC-----CCH---HHHHHHHHHHHHHHHHh
Confidence 349999999999987443221 11 0345667889999975442 222 35677788888898865
No 186
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=34.26 E-value=51 Score=32.69 Aligned_cols=44 Identities=25% Similarity=0.311 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 153 NSAQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 153 t~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+..+=.+=+...+++++++|.. ..+=++|+|+||+.+..+-..|
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~ 124 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENY 124 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHh
Confidence 3333345556677778888874 4577899999999999998875
No 187
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=34.22 E-value=49 Score=30.98 Aligned_cols=60 Identities=12% Similarity=0.147 Sum_probs=34.4
Q ss_pred ccEEEEEcCCCCccCCCCc-------cccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 038117 420 TSNIIFSNGMRDPFSRGGW-------VKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQYY 492 (500)
Q Consensus 420 ~sniiFtnG~~DPW~~~g~-------~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e~~ 492 (500)
..-|++++|+.|+=-...- +.... ..+..+++|+++|.... + ..+....+.+.+|++++-
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g--~~~~~~~~p~~gH~~~~-------~----~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAG--KPVELLIFPGEGHGFGN-------P----ENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTT--SSEEEEEETT-SSSTTS-------H----HHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcC--CCEEEEEcCcCCCCCCC-------c----hhHHHHHHHHHHHHHHHc
Confidence 3669999999997432211 11122 34677888999994332 2 233355555666666543
No 188
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=34.08 E-value=31 Score=34.91 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=38.9
Q ss_pred HHHHHhhhcCC--CCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 164 ILLHIKDKYNA--THAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 164 fi~~~k~~~~~--~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
++-++++.|.. ...-=++.|-|+||..|-|.-+.||+.|-=.++.|+-+..
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 55566666642 1224689999999999999999999999887777766643
No 189
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=34.00 E-value=35 Score=33.72 Aligned_cols=56 Identities=14% Similarity=0.222 Sum_probs=34.1
Q ss_pred EEEEEcCCCCccCCCCccccCCC-CCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 038117 422 NIIFSNGMRDPFSRGGWVKTYHF-FDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWIT 489 (500)
Q Consensus 422 niiFtnG~~DPW~~~g~~~~~s~-~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~ 489 (500)
-+++++|..|++........... -+....++|++++|..=+ ..|+ ++.+.|.+||+
T Consensus 236 P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p~-------~~~~~i~~fl~ 292 (294)
T PLN02824 236 PVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQD-----EAPE-------LVNPLIESFVA 292 (294)
T ss_pred CeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhh-----hCHH-------HHHHHHHHHHh
Confidence 48999999999986433211110 023457789999997443 3333 35555666664
No 190
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=33.94 E-value=38 Score=33.88 Aligned_cols=39 Identities=15% Similarity=-0.018 Sum_probs=26.1
Q ss_pred EEEEEcCCCCccCCCCccccCC-CCCCccEEEcCCCcccc
Q 038117 422 NIIFSNGMRDPFSRGGWVKTYH-FFDLSFSQDLNLGSHCL 460 (500)
Q Consensus 422 niiFtnG~~DPW~~~g~~~~~s-~~~~~~~~~I~gg~Hc~ 460 (500)
-+++++|..|++.......... .-+....+++++++|+.
T Consensus 250 P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~ 289 (306)
T TIGR01249 250 PTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSA 289 (306)
T ss_pred CeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 4899999999998754321110 00344577789999995
No 191
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=33.18 E-value=99 Score=30.78 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=57.5
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHI 168 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~ 168 (500)
=||+++++|-...... .+.++.. -...|=.+|..+ .|.-.-+ . ..--+++++..+.++
T Consensus 17 yPVv~f~~G~~~~~s~--Ys~ll~h-vAShGyIVV~~d--~~~~~~~-~----------------~~~~~~~~~~vi~Wl 74 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSW--YSQLLEH-VASHGYIVVAPD--LYSIGGP-D----------------DTDEVASAAEVIDWL 74 (259)
T ss_pred cCEEEEeCCcCCCHHH--HHHHHHH-HHhCceEEEEec--ccccCCC-C----------------cchhHHHHHHHHHHH
Confidence 5999999998733322 2233333 345688888877 2221111 1 111123344444443
Q ss_pred h----hhc----CCCCCCEEEeccChhhHHHHHHHHhC-----CCeEEEEEecccccc
Q 038117 169 K----DKY----NATHAPVIAIGASYGGELATWFRLKY-----PHVVIGSLASSAPIL 213 (500)
Q Consensus 169 k----~~~----~~~~~pwI~~GGSY~G~LAaw~R~kY-----P~~v~gavASSApv~ 213 (500)
. ..+ .++-.++-+.|+|-||-+|.-+-... +..+.|++.= -||.
T Consensus 75 ~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~l-DPVd 131 (259)
T PF12740_consen 75 AKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILL-DPVD 131 (259)
T ss_pred HhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEe-cccc
Confidence 3 222 23445899999999999998777777 4456665543 3553
No 192
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=33.10 E-value=32 Score=36.22 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=26.3
Q ss_pred EEEEEcCCCCccCCCCccccCCCCCCccEEEcCCCcccccc
Q 038117 422 NIIFSNGMRDPFSRGGWVKTYHFFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 422 niiFtnG~~DPW~~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl 462 (500)
-++++.|+.|+|......+...........+||+++|+.-+
T Consensus 327 PvLiI~G~~D~~v~~~~~~~~a~~~~a~l~vIp~aGH~~~~ 367 (383)
T PLN03084 327 PITVCWGLRDRWLNYDGVEDFCKSSQHKLIELPMAGHHVQE 367 (383)
T ss_pred CEEEEeeCCCCCcCHHHHHHHHHhcCCeEEEECCCCCCcch
Confidence 48899999999976432221110023456789999998544
No 193
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=32.25 E-value=58 Score=32.85 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=28.2
Q ss_pred CCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 175 THAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
+++...++|+|-||++|+.+-..|- .-+||-++|=.+
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPGd~ 310 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPGDA 310 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCchhh
Confidence 5688999999999999999987773 234566666543
No 194
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=32.25 E-value=58 Score=32.85 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=28.2
Q ss_pred CCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 175 THAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 175 ~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
+++...++|+|-||++|+.+-..|- .-+||-++|=.+
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPGd~ 310 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPGDA 310 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCchhh
Confidence 5688999999999999999987773 234566666543
No 195
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=32.22 E-value=32 Score=31.78 Aligned_cols=42 Identities=14% Similarity=-0.050 Sum_probs=27.4
Q ss_pred cEEEEEcCCCCccCCCCccccCC-CCCCccEEEcCCCcccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYH-FFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s-~~~~~~~~~I~gg~Hc~Dl 462 (500)
.-+++++|..|+........... .-++...+++|+++|+.-+
T Consensus 189 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 231 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFL 231 (245)
T ss_pred CCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 45899999999987633221110 0034567789999999554
No 196
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=31.70 E-value=1.6e+02 Score=28.82 Aligned_cols=82 Identities=20% Similarity=0.146 Sum_probs=51.8
Q ss_pred CcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHI 168 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~ 168 (500)
+--++|+||=|+.-.......-+...-.+.+=.+|.+.-| |.|- -+.--|..|-.+|+...+.++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~----Ssy~-----------G~Gt~slk~D~edl~~l~~Hi 100 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLR----SSYN-----------GYGTFSLKDDVEDLKCLLEHI 100 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecc----cccc-----------ccccccccccHHHHHHHHHHh
Confidence 4678999998764322111122233456667777777665 4442 234466778889999999987
Q ss_pred hhh-cCCCCCCEEEeccChhh
Q 038117 169 KDK-YNATHAPVIAIGASYGG 188 (500)
Q Consensus 169 k~~-~~~~~~pwI~~GGSY~G 188 (500)
... .+ ..+|++|+|=|-
T Consensus 101 ~~~~fS---t~vVL~GhSTGc 118 (299)
T KOG4840|consen 101 QLCGFS---TDVVLVGHSTGC 118 (299)
T ss_pred hccCcc---cceEEEecCccc
Confidence 632 22 489999999763
No 197
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=31.53 E-value=79 Score=34.61 Aligned_cols=53 Identities=21% Similarity=0.241 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccccc
Q 038117 161 YASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPILY 214 (500)
Q Consensus 161 ~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv~a 214 (500)
.+.|++.+........ |.+++|--=||=.++-+...+|+++--.+-..||+..
T Consensus 125 e~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 125 EAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 3557777765543223 8999999999999999999999999877777778754
No 198
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=31.34 E-value=35 Score=38.07 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=49.0
Q ss_pred cCCCHHHHHHHHHHHHHHHhhh-cCCCCCCEEEeccChhhHHHHHHHHhCCCeEEEEEeccccc
Q 038117 150 GYFNSAQALADYASILLHIKDK-YNATHAPVIAIGASYGGELATWFRLKYPHVVIGSLASSAPI 212 (500)
Q Consensus 150 ~yLt~~QALaD~a~fi~~~k~~-~~~~~~pwI~~GGSY~G~LAaw~R~kYP~~v~gavASSApv 212 (500)
+.+.-.+.++|+-.=++++-.+ |. ...+--+.|||-||.|.+-.-...|++|-+++|-...|
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gyt-~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGYT-QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCCC-CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 4455567888976666666544 44 34578889999999999999999999999999988665
No 199
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=31.01 E-value=29 Score=29.05 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=11.1
Q ss_pred CCCcchhHHHHHHH-HHHHhh
Q 038117 1 MKSSQFSFQWLLLM-VIFVST 20 (500)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~ 20 (500)
|.|-.+.++.|+++ +|||+.
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 77777666554444 444443
No 200
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=30.95 E-value=1.1e+02 Score=33.40 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=60.9
Q ss_pred CcEEEEeCCCCCCCCccc--ccchHHHhHHhcCceEEEEeeee--eecCCCCCCchhhccccccccCCCHHHHHHHHHHH
Q 038117 89 SPILAFLGAEAPIDDNIQ--LSGFTYENAHQFKALIVILEHRY--YGKSVPFGSRKAALKNARHRGYFNSAQALADYASI 164 (500)
Q Consensus 89 gPIfl~~gGE~~~~~~~~--~~g~~~~~A~~~gA~~v~lEHRy--yG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~f 164 (500)
-||++|+=|.+-..+... +.......+.+-+-++|.+..|= +| -..+++- ....|+......+||.=+..-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lG-F~st~d~----~~~gN~gl~Dq~~AL~wv~~~ 186 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLG-FLSTGDS----AAPGNLGLFDQLLALRWVKDN 186 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceece-eeecCCC----CCCCcccHHHHHHHHHHHHHH
Confidence 598888855543322210 11122334566678888888884 23 0011110 013577666444444322222
Q ss_pred HHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCC---CeEEEEEecccccc
Q 038117 165 LLHIKDKYNATHAPVIAIGASYGGELATWFRLKYP---HVVIGSLASSAPIL 213 (500)
Q Consensus 165 i~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP---~~v~gavASSApv~ 213 (500)
|. ..+.+..++-++|.|.||+.+..+- .-| ++|..++.=|+...
T Consensus 187 I~----~FGGdp~~vTl~G~saGa~~v~~l~-~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 187 IP----SFGGDPKNVTLFGHSAGAASVSLLT-LSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HH----hcCCCCCeEEEEeechhHHHHHHHh-cCHhhHHHHHHHHhhccccc
Confidence 22 3344556899999999998876643 222 55666655555543
No 201
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=30.44 E-value=2.9e+02 Score=29.11 Aligned_cols=19 Identities=42% Similarity=0.599 Sum_probs=16.3
Q ss_pred CCEEEeccChhhHHHHHHH
Q 038117 177 APVIAIGASYGGELATWFR 195 (500)
Q Consensus 177 ~pwI~~GGSY~G~LAaw~R 195 (500)
..++++|-|-||.|+.=+-
T Consensus 195 ~nI~LmGDSAGGnL~Ls~L 213 (374)
T PF10340_consen 195 KNIILMGDSAGGNLALSFL 213 (374)
T ss_pred CeEEEEecCccHHHHHHHH
Confidence 5799999999999987554
No 202
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=30.32 E-value=28 Score=32.11 Aligned_cols=40 Identities=10% Similarity=-0.014 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCccCC-CCc-cccCCCCCCccEEEcCCCcccccc
Q 038117 421 SNIIFSNGMRDPFSR-GGW-VKTYHFFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 421 sniiFtnG~~DPW~~-~g~-~~~~s~~~~~~~~~I~gg~Hc~Dl 462 (500)
..+++++|+.|+-.. ..- ..... +....+++|+++|+.-+
T Consensus 195 ~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 195 IPVLYLCGEKDEKFVQIAKEMQKLL--PNLTLVIIANAGHNIHL 236 (251)
T ss_pred CceEEEeeCcchHHHHHHHHHHhcC--CCCcEEEEcCCCCCcCc
Confidence 459999999997421 110 11112 34567789999998655
No 203
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=29.57 E-value=44 Score=27.29 Aligned_cols=28 Identities=21% Similarity=0.491 Sum_probs=17.8
Q ss_pred HHHHHHHH-HHhhhcCCCCCCE-EEeccChhhH
Q 038117 159 ADYASILL-HIKDKYNATHAPV-IAIGASYGGE 189 (500)
Q Consensus 159 aD~a~fi~-~~k~~~~~~~~pw-I~~GGSY~G~ 189 (500)
.|+|.+|+ .+.+.|+ ..| +++|+|||..
T Consensus 36 ~eiA~~iK~~lD~~yG---~~Wh~IVG~~Fg~~ 65 (89)
T PF01221_consen 36 KEIAEFIKQELDKKYG---PTWHCIVGKSFGSS 65 (89)
T ss_dssp HHHHHHHHHHHHHHHS---S-EEEEEESEEEEE
T ss_pred HHHHHHHHHHHhcccC---CceEEEECCcEEEE
Confidence 45555444 4556676 578 7789999863
No 204
>PLN02847 triacylglycerol lipase
Probab=29.34 E-value=65 Score=35.84 Aligned_cols=116 Identities=18% Similarity=0.242 Sum_probs=58.6
Q ss_pred CCceeeEEEEeccccCCCCCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeee---ecCCCCCCchhhcccc
Q 038117 70 YQTFPQRYVINSKFWGGGNSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYY---GKSVPFGSRKAALKNA 146 (500)
Q Consensus 70 ~~TF~QRY~~n~~~~~~~ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyy---G~S~P~~~~~~~~~s~ 146 (500)
++.|+-.|+|--+ ....=|||.+=|=.++. .++.++ .+..+-++|-.+ |.+..... -
T Consensus 162 s~i~kPaffVavD---h~~K~IVVsIRGT~Si~------D~LTDL----~~~~vPf~~s~l~~gG~~n~~~G-------~ 221 (633)
T PLN02847 162 AGILKPAFTIIRD---ENSKCFLLLIRGTHSIK------DTLTAA----TGAVVPFHHSVLHDGGVSNLVLG-------Y 221 (633)
T ss_pred cccCCCCeEEEEe---CCCCEEEEEECCCCCHH------HHHHhc----ccccccCCcccccccCcccCcCC-------c
Confidence 4788888888876 34567788777754432 223332 122222222111 11111110 1
Q ss_pred ccccCCCHHHHHHHHHH-HHHHHhhhcCCCCCCEEEeccChhhHHHHHHHH------hCCCeEEEEEe
Q 038117 147 RHRGYFNSAQALADYAS-ILLHIKDKYNATHAPVIAIGASYGGELATWFRL------KYPHVVIGSLA 207 (500)
Q Consensus 147 ~nl~yLt~~QALaD~a~-fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~------kYP~~v~gavA 207 (500)
..-.++...+-+.+... .+..+...+ ++-++|++|+|.||++|+-+-. .+|.+.-=+.|
T Consensus 222 AH~Gml~AArwI~~~i~~~L~kal~~~--PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFg 287 (633)
T PLN02847 222 AHCGMVAAARWIAKLSTPCLLKALDEY--PDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFA 287 (633)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEec
Confidence 23345555555554321 222222222 4578999999999999887543 35665433333
No 205
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=28.83 E-value=1.1e+02 Score=29.46 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=29.0
Q ss_pred HHHHHHHHH-HHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhC
Q 038117 155 AQALADYAS-ILLHIKDKYNATHAPVIAIGASYGGELATWFRLKY 198 (500)
Q Consensus 155 ~QALaD~a~-fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kY 198 (500)
+-|-.|+.. |-.+++.. + .+.|+|+.|+|=|+++..-+-+.+
T Consensus 74 ~~ay~DV~~AF~~yL~~~-n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANY-N-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhc-C-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 455667654 65556643 2 346999999999999887665544
No 206
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=28.72 E-value=1.4e+02 Score=29.14 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=52.7
Q ss_pred hHHHhHH---hcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccCh
Q 038117 110 FTYENAH---QFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASY 186 (500)
Q Consensus 110 ~~~~~A~---~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY 186 (500)
++..+|+ ++|-..+-+.-|-=|+|.-.= -.-|.+++- .|++..++++..... .==|++|+|.
T Consensus 50 ~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf-------~~Gn~~~ea-----dDL~sV~q~~s~~nr---~v~vi~gHSk 114 (269)
T KOG4667|consen 50 IMKNVAKALEKEGISAFRFDFSGNGESEGSF-------YYGNYNTEA-----DDLHSVIQYFSNSNR---VVPVILGHSK 114 (269)
T ss_pred HHHHHHHHHHhcCceEEEEEecCCCCcCCcc-------ccCcccchH-----HHHHHHHHHhccCce---EEEEEEeecC
Confidence 4555554 456777777777778776311 124555543 999999999885311 2236789999
Q ss_pred hhHHHHHHHHhCCC
Q 038117 187 GGELATWFRLKYPH 200 (500)
Q Consensus 187 ~G~LAaw~R~kYP~ 200 (500)
||..+--+..||++
T Consensus 115 Gg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 115 GGDVVLLYASKYHD 128 (269)
T ss_pred ccHHHHHHHHhhcC
Confidence 99999999999998
No 207
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=27.93 E-value=72 Score=33.79 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhh
Q 038117 152 FNSAQALADYASILLHIKDKYNATHAPVIAIGASYGG 188 (500)
Q Consensus 152 Lt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G 188 (500)
-|.||..+|+.+.|++..+..+. .+++++|-|.|.
T Consensus 303 rtPe~~a~Dl~r~i~~y~~~w~~--~~~~liGySfGA 337 (456)
T COG3946 303 RTPEQIAADLSRLIRFYARRWGA--KRVLLIGYSFGA 337 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHhhCc--ceEEEEeecccc
Confidence 47899999999999998876553 689999999985
No 208
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=27.54 E-value=3.4e+02 Score=30.21 Aligned_cols=86 Identities=9% Similarity=-0.004 Sum_probs=59.6
Q ss_pred HHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHH
Q 038117 111 TYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIKDKYNATHAPVIAIGASYGGEL 190 (500)
Q Consensus 111 ~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~L 190 (500)
+.+..-+.|=-|+.+.-|. |.. ..++++.+.=+..+..-++.+++..+ ..++.++|.+-||.|
T Consensus 239 lVr~lv~qG~~VflIsW~n-----P~~----------~~r~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl 301 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRN-----PDK----------AHREWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLT 301 (560)
T ss_pred HHHHHHHcCCeEEEEeCCC-----CCh----------hhcCCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHH
Confidence 4456677788999999887 422 23678877766555556666655433 257999999999998
Q ss_pred HHH----HHHhCCC-eEEEEEecccccc
Q 038117 191 ATW----FRLKYPH-VVIGSLASSAPIL 213 (500)
Q Consensus 191 Aaw----~R~kYP~-~v~gavASSApv~ 213 (500)
++- +..++|+ -+...+-=.+|+.
T Consensus 302 ~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 302 CAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred HHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 885 8888996 4666554555553
No 209
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=27.40 E-value=88 Score=34.91 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHh
Q 038117 155 AQALADYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 155 ~QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~k 197 (500)
++-...+...|+.+.+.. .+.|||++|+|+||.++-+|-..
T Consensus 193 d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 193 DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHh
Confidence 455555666666554432 24699999999999999887653
No 210
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.38 E-value=51 Score=33.12 Aligned_cols=40 Identities=20% Similarity=0.128 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEeccChhhHHHHHHHHhCC
Q 038117 160 DYASILLHIKDKYNATHAPVIAIGASYGGELATWFRLKYP 199 (500)
Q Consensus 160 D~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LAaw~R~kYP 199 (500)
|+++.++.+.....-+..++-+.|+|-||.||+-....-|
T Consensus 159 D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~ 198 (321)
T COG3458 159 DAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP 198 (321)
T ss_pred HHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh
Confidence 4444444333333335568999999999999976443333
No 211
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=26.72 E-value=66 Score=32.71 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=33.3
Q ss_pred cEEEEEcCCCCccCCCCccccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWIT 489 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~ 489 (500)
-.+++++|+.|+=-......... ......++||++|..-+- +| +++.+.|.+||+
T Consensus 315 ~Pvlii~g~~D~~vp~~~~~~l~--~~~~~~~~~~~gH~~~~e-----~p-------~~~~~~i~~fl~ 369 (371)
T PRK14875 315 IPVLVIWGEQDRIIPAAHAQGLP--DGVAVHVLPGAGHMPQME-----AA-------ADVNRLLAEFLG 369 (371)
T ss_pred CCEEEEEECCCCccCHHHHhhcc--CCCeEEEeCCCCCChhhh-----CH-------HHHHHHHHHHhc
Confidence 35999999999643222112222 345677899999975442 22 345556666664
No 212
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=25.85 E-value=38 Score=32.25 Aligned_cols=40 Identities=15% Similarity=0.007 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCccCCCCcc--ccCCCCCCccEEEcCCCcccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWV--KTYHFFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~--~~~s~~~~~~~~~I~gg~Hc~Dl 462 (500)
-.+++++|+.|+....... ...- +....+++++++|+.=+
T Consensus 232 ~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~ 273 (288)
T TIGR01250 232 VPTLLTVGEFDTMTPEAAREMQELI--AGSRLVVFPDGSHMTMI 273 (288)
T ss_pred CCEEEEecCCCccCHHHHHHHHHhc--cCCeEEEeCCCCCCccc
Confidence 4588999999985331111 1111 34457789999998544
No 213
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=25.78 E-value=67 Score=29.63 Aligned_cols=42 Identities=10% Similarity=0.004 Sum_probs=26.7
Q ss_pred cEEEEEcCCCCccCCCCccccCC-CCCCccEEEcCCCcccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYH-FFDLSFSQDLNLGSHCLDL 462 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s-~~~~~~~~~I~gg~Hc~Dl 462 (500)
--|++++|+.|+.-......... .-+....+++|+++|+.-+
T Consensus 194 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR02427 194 VPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCV 236 (251)
T ss_pred CCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccc
Confidence 45999999999997643221110 0023456788999998643
No 214
>PRK10749 lysophospholipase L2; Provisional
Probab=25.39 E-value=1.2e+02 Score=30.82 Aligned_cols=61 Identities=5% Similarity=0.071 Sum_probs=39.3
Q ss_pred cEEEEEcCCCCccCCCCccc----cC----CCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVK----TY----HFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~----~~----s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
--+++..|+.|+.-.-.... .. .+..+...+++||++|+.=+-. + ..|+++++.|.+||++
T Consensus 260 ~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~-----~----~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 260 TPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEK-----D----AMRSVALNAIVDFFNR 328 (330)
T ss_pred CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCC-----c----HHHHHHHHHHHHHHhh
Confidence 35999999999987633211 10 0002345788999999743211 1 3578888889999875
No 215
>PRK00870 haloalkane dehalogenase; Provisional
Probab=24.90 E-value=73 Score=31.58 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=33.7
Q ss_pred cEEEEEcCCCCccCCCCccccCCC-CCCc---cEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 038117 421 SNIIFSNGMRDPFSRGGWVKTYHF-FDLS---FSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQ 490 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~~~~s~-~~~~---~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e 490 (500)
.-++++.|+.||...... ..... -+.. ...+|++++|..=+ ..| ++..+.|..||.+
T Consensus 240 ~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p-------~~~~~~l~~fl~~ 300 (302)
T PRK00870 240 KPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQE-----DSG-------EELAEAVLEFIRA 300 (302)
T ss_pred CceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchh-----hCh-------HHHHHHHHHHHhc
Confidence 448999999999876432 11110 0112 25688999998532 222 3456667777753
No 216
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=24.82 E-value=50 Score=30.31 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=17.2
Q ss_pred CEEEeccChhhHHHHHHHHh
Q 038117 178 PVIAIGASYGGELATWFRLK 197 (500)
Q Consensus 178 pwI~~GGSY~G~LAaw~R~k 197 (500)
++|++||+++|+.+|..-.+
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~ 20 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELAR 20 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHH
T ss_pred CEEEEecHHHHHHHHHHHhc
Confidence 47999999999999987763
No 217
>PLN02511 hydrolase
Probab=24.12 E-value=1.5e+02 Score=30.95 Aligned_cols=42 Identities=10% Similarity=0.009 Sum_probs=29.5
Q ss_pred cEEEEEcCCCCccCCCCcc----ccCCCCCCccEEEcCCCcccccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWV----KTYHFFDLSFSQDLNLGSHCLDLDE 464 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~----~~~s~~~~~~~~~I~gg~Hc~Dl~~ 464 (500)
--+++++|..||+...... .... +.+..+++++|+|+.=+-.
T Consensus 299 vPtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~ 344 (388)
T PLN02511 299 VPLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAG 344 (388)
T ss_pred CCeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccC
Confidence 3489999999999764322 1122 4567788999999976643
No 218
>PRK10162 acetyl esterase; Provisional
Probab=24.01 E-value=1.1e+02 Score=30.91 Aligned_cols=42 Identities=7% Similarity=-0.077 Sum_probs=30.1
Q ss_pred cEEEEEcCCCCccCCCCcc-----ccCCCCCCccEEEcCCCcccccccc
Q 038117 421 SNIIFSNGMRDPFSRGGWV-----KTYHFFDLSFSQDLNLGSHCLDLDE 464 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~~-----~~~s~~~~~~~~~I~gg~Hc~Dl~~ 464 (500)
..++++.|+.||.+.-+.. .... ..+...+.+|..|......
T Consensus 249 Pp~~i~~g~~D~L~de~~~~~~~L~~aG--v~v~~~~~~g~~H~f~~~~ 295 (318)
T PRK10162 249 PPCFIAGAEFDPLLDDSRLLYQTLAAHQ--QPCEFKLYPGTLHAFLHYS 295 (318)
T ss_pred CCeEEEecCCCcCcChHHHHHHHHHHcC--CCEEEEEECCCceehhhcc
Confidence 4589999999999875542 1222 3566788999999876543
No 219
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=23.86 E-value=2.7e+02 Score=28.09 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=21.9
Q ss_pred EEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEee
Q 038117 91 ILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEH 127 (500)
Q Consensus 91 Ifl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEH 127 (500)
|++.+|--+..- +.+...+|+++|+.+|.+..
T Consensus 1 vi~i~G~t~~GK-----s~la~~l~~~~~~~iis~Ds 32 (287)
T TIGR00174 1 VIFIMGPTAVGK-----SQLAIQLAKKLNAEIISVDS 32 (287)
T ss_pred CEEEECCCCCCH-----HHHHHHHHHhCCCcEEEech
Confidence 355666443322 35677899999999999865
No 220
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=23.05 E-value=2.1e+02 Score=27.96 Aligned_cols=68 Identities=16% Similarity=0.022 Sum_probs=45.6
Q ss_pred EEEEcCCCCccCCCCcc-------ccCCCCCCccEEEcCCCccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 038117 423 IIFSNGMRDPFSRGGWV-------KTYHFFDLSFSQDLNLGSHCLDLDEAKKSDPDWLVQQRKTEVKIMQGWITQYY 492 (500)
Q Consensus 423 iiFtnG~~DPW~~~g~~-------~~~s~~~~~~~~~I~gg~Hc~Dl~~~~~~D~~~l~~aR~~~~~~i~~Wl~e~~ 492 (500)
|+|.-|++|+-.+..-. +. +++-..++-+.+|-+|..=-+..+.. .|+.+++-++..+.+..|++++-
T Consensus 167 ilfl~ae~D~~~p~~~v~~~ee~lk~-~~~~~~~v~~f~g~~HGf~~~r~~~~-~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 167 ILFLFAELDEDVPPKDVKAWEEKLKE-NPAVGSQVKTFSGVGHGFVARRANIS-SPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred EEEEeecccccCCHHHHHHHHHHHhc-CcccceeEEEcCCccchhhhhccCCC-ChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999999998764431 11 11122456677877777655444444 44567788888999999998763
No 221
>smart00580 PUG domain in protein kinases, N-glycanases and other nuclear proteins.
Probab=22.99 E-value=31 Score=26.01 Aligned_cols=47 Identities=15% Similarity=0.293 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhhcCCC--CCCEEEeccChhhHHHHHHHHhCCCeEE
Q 038117 157 ALADYASILLHIKDKYNAT--HAPVIAIGASYGGELATWFRLKYPHVVI 203 (500)
Q Consensus 157 ALaD~a~fi~~~k~~~~~~--~~pwI~~GGSY~G~LAaw~R~kYP~~v~ 203 (500)
++.|+-+.++++.+.+.-. +..+---=||.+|++.-++..+||++..
T Consensus 2 sv~dLLr~irNi~~hp~e~k~n~~~~~~l~~~pg~~~~l~~~gFp~l~~ 50 (58)
T smart00580 2 SVRDLLRALRNILHHPREEKGNPAIKERLGDVPGGFELYFTVGFPRLLI 50 (58)
T ss_pred cHHHHHHHHHHHhhCcchhhcCHHHHHHhcCCCcHHHHHHHcCCCcccc
Confidence 5789999999888765532 2222223478999999999999999865
No 222
>PLN02840 tRNA dimethylallyltransferase
Probab=21.97 E-value=3.9e+02 Score=28.58 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=25.4
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEee
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEH 127 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEH 127 (500)
.++|+++.|.-|..- +.+...||+++|+.+|.+-.
T Consensus 20 ~~~vi~I~GptgsGK-----Ttla~~La~~~~~~iis~Ds 54 (421)
T PLN02840 20 KEKVIVISGPTGAGK-----SRLALELAKRLNGEIISADS 54 (421)
T ss_pred CCeEEEEECCCCCCH-----HHHHHHHHHHCCCCeEeccc
Confidence 456777777655433 35677999999999888765
No 223
>PLN03058 dynein light chain type 1 family protein; Provisional
Probab=21.79 E-value=90 Score=27.63 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=17.7
Q ss_pred HHHHHHH-HHHhhhcCCCCCCE-EEeccChhh
Q 038117 159 ADYASIL-LHIKDKYNATHAPV-IAIGASYGG 188 (500)
Q Consensus 159 aD~a~fi-~~~k~~~~~~~~pw-I~~GGSY~G 188 (500)
.|+|.+| +.+.+.|+ ..| +++|+|||-
T Consensus 69 kdIA~~IKk~fDkkYG---~tWHCIVGk~FGs 97 (128)
T PLN03058 69 KRLALALKKEFDSAYG---PAWHCIVGTSFGS 97 (128)
T ss_pred HHHHHHHHHHHhhhhC---CceEEEECCcEEE
Confidence 5667665 34556676 356 557999975
No 224
>PRK08233 hypothetical protein; Provisional
Probab=21.54 E-value=3.9e+02 Score=23.91 Aligned_cols=85 Identities=12% Similarity=0.140 Sum_probs=44.3
Q ss_pred cEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeeeeeecCCCCCCchhhccccccccCCCHHHHHHHHHHHHHHHh
Q 038117 90 PILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHRYYGKSVPFGSRKAALKNARHRGYFNSAQALADYASILLHIK 169 (500)
Q Consensus 90 PIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHRyyG~S~P~~~~~~~~~s~~nl~yLt~~QALaD~a~fi~~~k 169 (500)
.|+...|+-|..- +.+...+|++++...+.....|+-...|.. ... ... ....| ...|+..+.+.++
T Consensus 4 ~iI~I~G~~GsGK-----tTla~~L~~~l~~~~~~~~d~~~~~~~~~~-~~~-~~~-~~~~~-----~~~~~~~~~~~l~ 70 (182)
T PRK08233 4 KIITIAAVSGGGK-----TTLTERLTHKLKNSKALYFDRYDFDNCPED-ICK-WID-KGANY-----SEWVLTPLIKDIQ 70 (182)
T ss_pred eEEEEECCCCCCH-----HHHHHHHHhhCCCCceEEECCEEcccCchh-hhh-hhh-ccCCh-----hhhhhHHHHHHHH
Confidence 5666677665443 246677899987555555555553333311 000 000 11122 1235556666666
Q ss_pred hhcCCCCCCEEEeccChh
Q 038117 170 DKYNATHAPVIAIGASYG 187 (500)
Q Consensus 170 ~~~~~~~~pwI~~GGSY~ 187 (500)
+.+...+.+||+++|-+.
T Consensus 71 ~~~~~~~~~~vivd~~~~ 88 (182)
T PRK08233 71 ELIAKSNVDYIIVDYPFA 88 (182)
T ss_pred HHHcCCCceEEEEeeehh
Confidence 555444457888887654
No 225
>PLN02165 adenylate isopentenyltransferase
Probab=20.71 E-value=2.4e+02 Score=29.25 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=25.7
Q ss_pred CCcEEEEeCCCCCCCCcccccchHHHhHHhcCceEEEEeee
Q 038117 88 NSPILAFLGAEAPIDDNIQLSGFTYENAHQFKALIVILEHR 128 (500)
Q Consensus 88 ggPIfl~~gGE~~~~~~~~~~g~~~~~A~~~gA~~v~lEHR 128 (500)
.++|++++|--|..- +.+...+|+.+|+.+|..--+
T Consensus 42 ~g~iivIiGPTGSGK-----StLA~~LA~~l~~eIIsaDs~ 77 (334)
T PLN02165 42 KDKVVVIMGATGSGK-----SRLSVDLATRFPSEIINSDKM 77 (334)
T ss_pred CCCEEEEECCCCCcH-----HHHHHHHHHHcCCceecCChh
Confidence 367888888544332 356778999999988887555
No 226
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=20.47 E-value=94 Score=29.35 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCccCCCCc-------cccCCCCCCccEEEcCCCcccc
Q 038117 421 SNIIFSNGMRDPFSRGGW-------VKTYHFFDLSFSQDLNLGSHCL 460 (500)
Q Consensus 421 sniiFtnG~~DPW~~~g~-------~~~~s~~~~~~~~~I~gg~Hc~ 460 (500)
+.|+.++|..||.-.... +.... ..+....++|++|-.
T Consensus 156 ~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--~~v~~~~~~g~gH~i 200 (216)
T PF02230_consen 156 TPILIIHGDEDPVVPFEWAEKTAEFLKAAG--ANVEFHEYPGGGHEI 200 (216)
T ss_dssp S-EEEEEETT-SSSTHHHHHHHHHHHHCTT---GEEEEEETT-SSS-
T ss_pred CcEEEEecCCCCcccHHHHHHHHHHHHhcC--CCEEEEEcCCCCCCC
Confidence 569999999999876322 12222 346677789999953
No 227
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=20.06 E-value=4.3e+02 Score=27.03 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=40.3
Q ss_pred cchHHHhHHhcCceEEEEeee--ee----ecCCCCCCchhhcccc--------ccccCCCHHHHHHHHHHHHHHHhhhcC
Q 038117 108 SGFTYENAHQFKALIVILEHR--YY----GKSVPFGSRKAALKNA--------RHRGYFNSAQALADYASILLHIKDKYN 173 (500)
Q Consensus 108 ~g~~~~~A~~~gA~~v~lEHR--yy----G~S~P~~~~~~~~~s~--------~nl~yLt~~QALaD~a~fi~~~k~~~~ 173 (500)
+....+||+++||-||.+.=+ |= |..+|... + ...+ +=-...|+.+...|...-|..+...
T Consensus 17 T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~--e-~~~vpHhliDi~~p~e~ysa~~f~~~a~~~i~~i~~r-- 91 (308)
T COG0324 17 TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLE--E-LAGVPHHLIDIRDPTESYSAAEFQRDALAAIDDILAR-- 91 (308)
T ss_pred HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHH--H-HcCCCEEEecccCccccccHHHHHHHHHHHHHHHHhC--
Confidence 356789999999999987532 11 33444221 0 0000 0012467777777776666665542
Q ss_pred CCCCCEEEeccCh
Q 038117 174 ATHAPVIAIGASY 186 (500)
Q Consensus 174 ~~~~pwI~~GGSY 186 (500)
+..=|++|||.
T Consensus 92 --gk~pIlVGGTg 102 (308)
T COG0324 92 --GKLPILVGGTG 102 (308)
T ss_pred --CCCcEEEccHH
Confidence 23447788863
Done!